RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GSG1L (Homo sapiens)

Ensembl gene IDs: ENSG00000169181

Ensembl transcript IDs: ENST00000380897.7, ENST00000395724.7, ENST00000447459.7, ENST00000562611.1, ENST00000569166.1

Found 409 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACGGCACACAGGCCAGGGTTCTGGGGGCACCACTCTGGTGGTCTTaGAGCAGGGGCTGGTGCCAGCGATGGCCTGAGGTCCGCGGGCCA +
Preference number: 1 (lower is better)
Translates to: HGTQARVLGAPLWWS*SRGWCQRWPEVRGP
Trigger: TGGCCCGCGGACCTCAGGCCATCGCTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAGAACCCTGGCCTGTGTGCCGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR CCA 90 bp CTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGCCAGGGTTCTaGGGGCACCACTCTGGTGGTCTTGCAGCAGGGGCTGGTGCCAGC +
Preference number: 1 (lower is better)
Translates to: LPRRLTEFTAHRPGF*GHHSGGLAAGAGAS
Trigger: GCTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAGAACCCTGGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR CCA 90 bp CCTGTGCATTCCCTTGGGCCTGCCCTGGCCCCATTTCCAAGGCCATaGGACCCAGGCAGCGATGGGCAGGACAGGCCTGGCATCTCCCAC +
Preference number: 1 (lower is better)
Translates to: PVHSLGPALAPFPRP*DPGSDGQDRPGISH
Trigger: GTGGGAGATGCCAGGCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAATGCACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR CCA 90 bp GGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTGCATTCCCTTaGGCCTGCCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAG +
Preference number: 1 (lower is better)
Translates to: GLLSQSHSVQPCAFP*ACPGPISKAMGPRQ
Trigger: CTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAATGCACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR CCA 90 bp TGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTaGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCA +
Preference number: 1 (lower is better)
Translates to: CPSGHLTGLWVPAIQ*PVAMCLLASQLCPA
Trigger: TGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR GCA 90 bp CAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTaGATTCCCTTGGGCCTGCCCTGGCCCCATTTCCAAGGCCATGGG +
Preference number: 1 (lower is better)
Translates to: QESGAAVPKSLCAAL*IPLGLPWPHFQGHG
Trigger: CCCATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAATGCACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR CCA 90 bp ATTTCCAAGGCCATGGGACCCAGGCAGCGATGGGCAGGACAGGCCTaGCATCTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGCCA +
Preference number: 1 (lower is better)
Translates to: ISKAMGPRQRWAGQA*HLPRRLTEFTAHRP
Trigger: TGGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR TCA 90 bp CTGGACCTCCTGCGGTCCACTCGCCAACTTCAGAAGGACCCTGGGTaGGAACAAGAGCTCCTAGATGCCTGGTGGCCAGGGCTAGATCCC +
Preference number: 1 (lower is better)
Translates to: LDLLRSTRQLQKDPG*EQELLDAWWPGLDP
Trigger: GGGATCTAGCCCTGGCCACCAGGCATCTAGGAGCTCTTGTTCTCACCCAGGGTCCTTCTGAAGTTGGCGAGTGGACCGCAGGAGGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR GCA 90 bp GTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTaGAGCCCTGTGCATTCCCTTGGGCCTGCCCTGGCCCCATTTCCA +
Preference number: 1 (lower is better)
Translates to: VMMARVRGCCPKVTL*SPVHSLGPALAPFP
Trigger: TGGAAATGGGGCCAGGGCAGGCCCAAGGGAATGCACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR GCA 90 bp CTAGATGCCTGGTGGCCAGGGCTAGATCCCTGTCAGATCTGTCCCTaGCCAGGCCCATATATGGCAGCCGCCCTCTCTTGCATGAGGCCA +
Preference number: 1 (lower is better)
Translates to: LDAWWPGLDPCQICP*PGPYMAAALSCMRP
Trigger: TGGCCTCATGCAAGAGAGGGCGGCTGCCATATATGGGCCTGGGCAGGGACAGATCTGACAGGGATCTAGCCCTGGCCACCAGGCATCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR CCA 90 bp GCTTGTGGGTGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTaGCATCGCAGCTGTGCCCAGCAGGGCTCATGTGATGATGGCAAG +
Preference number: 1 (lower is better)
Translates to: ACGCQPFSGQWPCVS*HRSCAQQGSCDDGK
Trigger: CTTGCCATCATCACATGAGCCCTGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGCACCCACAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR CCA 90 bp TCTCCTGGACCTCCTGCGGTCCACTCGCCAACTTCAGAAGGACCCTaGGTGAGAACAAGAGCTCCTAGATGCCTGGTGGCCAGGGCTAGA +
Preference number: 1 (lower is better)
Translates to: SPGPPAVHSPTSEGP*VRTRAPRCLVARAR
Trigger: TCTAGCCCTGGCCACCAGGCATCTAGGAGCTCTTGTTCTCACCCAGGGTCCTTCTGAAGTTGGCGAGTGGACCGCAGGAGGTCCAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR GCA 90 bp TCGCCAACTTCAGAAGGACCCTGGGTGAGAACAAGAGCTCCTAGATaGCTGGTGGCCAGGGCTAGATCCCTGTCAGATCTGTCCCTGCCC +
Preference number: 1 (lower is better)
Translates to: SPTSEGPWVRTRAPR*LVARARSLSDLSLP
Trigger: GGGCAGGGACAGATCTGACAGGGATCTAGCCCTGGCCACCAGGCATCTAGGAGCTCTTGTTCTCACCCAGGGTCCTTCTGAAGTTGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR GCA 90 bp GTGGAATCTGAACCCAGGCTCACGACAATAGATGCCCTCTCTGGATaGTCCAGCATCCCACCTCAAGTGCCTACCACAGTGCTTGGCACA +
Preference number: 1 (lower is better)
Translates to: VESEPRLTTIDALSG*SSIPPQVPTTVLGT
Trigger: TGTGCCAAGCACTGTGGTAGGCACTTGAGGTGGGATGCTGGAGCATCCAGAGAGGGCATCTATTGTCGTGAGCCTGGGTTCAGATTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR CCA 90 bp CCACTCAGTCTATTCCCTCCTAATTGGTTCCTGAATCTGCCCGCATaGTCCCCTCCCCAGGGCAACTTTCCTAAGCCAGCCCACTTTCTT +
Preference number: 1 (lower is better)
Translates to: PLSLFPPNWFLNLPA*SPPQGNFPKPAHFL
Trigger: AAGAAAGTGGGCTGGCTTAGGAAAGTTGCCCTGGGGAGGGGACCATGCGGGCAGATTCAGGAACCAATTAGGAGGGAATAGACTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR TCA 90 bp AGGTCAAGTAACTCGCCCAAGGTCACAAGTGGAGAAGGTGGAATCTaGACCCAGGCTCACGACAATAGATGCCCTCTCTGGATGCTCCAG +
Preference number: 1 (lower is better)
Translates to: RSSNSPKVTSGEGGI*TQAHDNRCPLWMLQ
Trigger: CTGGAGCATCCAGAGAGGGCATCTATTGTCGTGAGCCTGGGTTCAGATTCCACCTTCTCCACTTGTGACCTTGGGCGAGTTACTTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR TCA 90 bp AAGACATCTGAACCACGAAGTCTCCGTCTTCCCTATCCCCCAAGCTaGCCCTGTAACCTGAGAGTCGTCACCAACTTTCCTCTTCTCCCA +
Preference number: 1 (lower is better)
Translates to: KTSEPRSLRLPYPPS*PCNLRVVTNFPLLP
Trigger: TGGGAGAAGAGGAAAGTTGGTGACGACTCTCAGGTTACAGGGTCAGCTTGGGGGATAGGGAAGACGGAGACTTCGTGGTTCAGATGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR CCA 90 bp CTGCTATACTCTTGCCTGGCTGATGCCCAGACAATCTTCATGTCTTaGCTTAGACATCATTTTCTCAAAGGAGCCTCCCTAGACTACAGC +
Preference number: 1 (lower is better)
Translates to: LLYSCLADAQTIFMS*LRHHFLKGASLDYS
Trigger: GCTGTAGTCTAGGGAGGCTCCTTTGAGAAAATGATGTCTAAGCCAAGACATGAAGATTGTCTGGGCATCAGCCAGGCAAGAGTATAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR TCA 90 bp GGGATGAATGAAAAATGGATGAATGGACAATGGACAATAGCTGGATaGGTGATAGATGCTGGATGGATGGATGGATGGATAGATGATGGA +
Preference number: 1 (lower is better)
Translates to: GMNEKWMNGQWTIAG*VIDAGWMDGWIDDG
Trigger: TCCATCATCTATCCATCCATCCATCCATCCAGCATCTATCACTCATCCAGCTATTGTCCATTGTCCATTCATCCATTTTTCATTCATCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR TCA 90 bp CCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATGGGCAGGACAGGCGTGCCAGCGATGGCCTaGGGTCCGCGGGCCAGGTTG +
Preference number: 2 (lower is better)
Translates to: PWPHFQGHGTQAAMGRTGVPAMA*GPRARL
Trigger: CAACCTGGCCCGCGGACCTCAGGCCATCGCTGGCAC...GCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CCA 90 bp CCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATGGGCAGGACAGGCGGGGCACCACTCTGGTaGTCTTGCAGCAGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: PWPHFQGHGTQAAMGRTGGAPLW*SCSRGW
Trigger: CCAGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCC...GCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR TCA 90 bp AGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCGTGCCAGCGATGGCCTaGGGTCCGCGGGCCAGGTTG +
Preference number: 2 (lower is better)
Translates to: SHSVASGHVSPGIAAVPSVPAMA*GPRARL
Trigger: CAACCTGGCCCGCGGACCTCAGGCCATCGCTGGCAC...GCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CCA 90 bp AGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCGGCTGGTGCCAGCGATaGCCTGAGGTCCGCGGGCCA +
Preference number: 2 (lower is better)
Translates to: SHSVASGHVSPGIAAVPSGWCQR*PEVRGP
Trigger: TGGCCCGCGGACCTCAGGCCATCGCTGGCACCAGCC...GCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CCA 90 bp CATCGCAGCTGTGCCCAGCAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGGGCTGGTGCCAGCGATaGCCTGAGGTCCGCGGGCCA +
Preference number: 2 (lower is better)
Translates to: HRSCAQQGSCDDGKSPGLGWCQR*PEVRGP
Trigger: TGGCCCGCGGACCTCAGGCCATCGCTGGCACCAGCC...CAGCCCCGGACTCTTGCCATCATCACATGAGCCCTGCTGGGCACAGCTGCGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CCA 90 bp CCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATGGGCAGGACAGGCTCTTGCAGCAGGGGCTaGTGCCAGCGATGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: PWPHFQGHGTQAAMGRTGSCSRG*CQRWPE
Trigger: CTCAGGCCATCGCTGGCACCAGCCCCTGCTGCAAGA...GCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CCA 90 bp CCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATGGGCAGGACAGGCCACAGGCCAGGGTTCTaGGGGCACCACTCTGGTGGT +
Preference number: 2 (lower is better)
Translates to: PWPHFQGHGTQAAMGRTGHRPGF*GHHSGG
Trigger: ACCACCAGAGTGGTGCCCCCAGAACCCTGGCCTGTG...GCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR TCA 90 bp GCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCCCCACGCAGGCTGACTaGGTTCACGGCACACAGGCC +
Preference number: 2 (lower is better)
Translates to: ASHSVASGHVSPGIAAVPPTQAD*VHGTQA
Trigger: GGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGG...GGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CCA 90 bp GCCTGCTGTGTGACACCCCTGCAGTGCCTGCGCCACTGCCCCCTCCTTCAGGAATCTTGCAGCAGGGGCTaGTGCCAGCGATGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: ACCVTPLQCLRHCPLLQESCSRG*CQRWPE
Trigger: CTCAGGCCATCGCTGGCACCAGCCCCTGCTGCAAGA...TTCCTGAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCACACAGCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CCA 90 bp GCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCCTGGGGGCACCACTCTaGTGGTCTTGCAGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: ASHSVASGHVSPGIAAVPLGAPL*WSCSRG
Trigger: GCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAG...GGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CCA 90 bp GCTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCCCCTTGGGCCTGCCCTaGCCCCATTTCCAAGGCCAT +
Preference number: 2 (lower is better)
Translates to: ALPLWAPDWLVGASHSVAPLGLP*PHFQGH
Trigger: ATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGG...GGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR GCA 90 bp GCTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCGCATTCCCTTGGGCCTaGCCTGGCCCCATTTCCAAG +
Preference number: 2 (lower is better)
Translates to: ALPLWAPDWLVGASHSVAAFPWA*PGPISK
Trigger: CTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAATGC...GGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR GCA 90 bp GCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCCTCTGTGCAGCCCTGTaGATTCCCTTGGGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: ASHSVASGHVSPGIAAVPLCAAL*IPLGLP
Trigger: GGGCAGGCCCAAGGGAATGCACAGGGCTGCACAGAG...GGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CCA 90 bp AGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCCTGGGGGCACCACTCTaGTGGTCTTGCAGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: SHSVASGHVSPGIAAVPSLGAPL*WSCSRG
Trigger: GCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAG...GCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CCA 90 bp GCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCCACAGGCCAGGGTTCTaGGGGCACCACTCTGGTGGT +
Preference number: 2 (lower is better)
Translates to: ASHSVASGHVSPGIAAVPHRPGF*GHHSGG
Trigger: ACCACCAGAGTGGTGCCCCCAGAACCCTGGCCTGTG...GGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CCA 90 bp GCTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCCCATTTCCAAGGCCATaGGACCCAGGCAGCGATGGG +
Preference number: 2 (lower is better)
Translates to: ALPLWAPDWLVGASHSVAPFPRP*DPGSDG
Trigger: CCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGG...GGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CCA 90 bp TCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCAGGGCTCCCTTGGGCCTGCCCTaGCCCCATTTCCAAGGCCAT +
Preference number: 2 (lower is better)
Translates to: SVASGHVSPGIAAVPSRAPLGLP*PHFQGH
Trigger: ATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGG...AGCCCTGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR TCA 90 bp ATTCCCTTGGGCCTGCCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATCTCCCACGCAGGCTaGCTGAGTTCACGGCACACA +
Preference number: 2 (lower is better)
Translates to: IPLGLPWPHFQGHGTQAAISHAG*LSSRHT
Trigger: TGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGAT...CGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR GCA 90 bp GCTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCGCAAGAGTCCGGGGCTaGTGTCCCAAAGTCACTCTG +
Preference number: 2 (lower is better)
Translates to: ALPLWAPDWLVGASHSVAARVRG*CPKVTL
Trigger: CAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGC...GGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR GCA 90 bp GACAGGGCAGCCACAGCCCACAGAGCAACTGGCCTCCATACACCGCAAGAAAACCACCCCTGCAGTGCCTaGGCCACTGCCCCCTCCTTC +
Preference number: 2 (lower is better)
Translates to: DRAATAHRATGLHTPQENHPCSA*ATAPSF
Trigger: GAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTG...GTTTTCTTGCGGTGTATGGAGGCCAGTTGCTCTGTGGGCTGTGGCTGCCCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR TCA 90 bp ATAGATGCCCTCTCTGGATGCTCCAGCATCCCACCTCAAGTGCCTACCACAGTGGTGCCAGCGATGGCCTaGGGTCCGCGGGCCAGGTTG +
Preference number: 2 (lower is better)
Translates to: IDALSGCSSIPPQVPTTVVPAMA*GPRARL
Trigger: CAACCTGGCCCGCGGACCTCAGGCCATCGCTGGCAC...CACTGTGGTAGGCACTTGAGGTGGGATGCTGGAGCATCCAGAGAGGGCATCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR GCA 90 bp CACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCCACTCTGGTGGTCTTaGAGCAGGGGCTGGTGCCAG +
Preference number: 2 (lower is better)
Translates to: HLTGLWVPAIQWPVAMCLPLWWS*SRGWCQ
Trigger: CTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGG...GAGACACATGGCCACTGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CCA 90 bp GGTGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCATTTCCAAGGCCATaGGACCCAGGCAGCGATGGG +
Preference number: 2 (lower is better)
Translates to: GASHSVASGHVSPGIAAVPFPRP*DPGSDG
Trigger: CCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGG...CACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR TCA 90 bp GGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCCCACGCAGGCTGACTaGGTTCACGGCACACAGGCC +
Preference number: 2 (lower is better)
Translates to: GSCDDGKSPGLLSQSHSVPTQAD*VHGTQA
Trigger: GGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGG...CACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR TCA 90 bp CTGGTGGCCAGGGCTAGATCCCTGTCAGATCTGTCCCTGCCCAGGCCCATATATCAGCTGGCTGTCCCCTaGGCCCCTGAGACTCAAGAC +
Preference number: 2 (lower is better)
Translates to: LVARARSLSDLSLPRPIYQLAVP*APETQD
Trigger: GTCTTGAGTCTCAGGGGCTCAGGGGACAGCCAGCTG...ATATATGGGCCTGGGCAGGGACAGATCTGACAGGGATCTAGCCCTGGCCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR GCA 90 bp TGTCAGATCTGTCCCTGCCCAGGCCCATATATGGCAGCCGCCCTCTCTTGCATGCCCACATCTCTTGCTTaGCTGGCCCCTGCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: CQICPCPGPYMAAALSCMPTSLA*LAPALP
Trigger: GGGCAAGGCAGGGGCCAGGCAAGCAAGAGATGTGGG...CATGCAAGAGAGGGCGGCTGCCATATATGGGCCTGGGCAGGGACAGATCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR CCA 90 bp CAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGGGGCACCACTCTGGTaGTCTTGCAGCAGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: QGSCDDGKSPGLLSQSHSGAPLW*SCSRGW
Trigger: CCAGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCC...AGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CCA 90 bp ATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTGCATCACAGGCCAGGGTTCTaGGGGCACCACTCTGGTGGT +
Preference number: 2 (lower is better)
Translates to: MARVRGCCPKVTLCSPVHHRPGF*GHHSGG
Trigger: ACCACCAGAGTGGTGCCCCCAGAACCCTGGCCTGTG...ATGCACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CCA 90 bp TGTCAGATCTGTCCCTGCCCAGGCCCATATATGGCAGCCGCCCTCTCTTGCATGCTGAATCTGCCCGCATaGTCCCCTCCCCAGGGCAAC +
Preference number: 2 (lower is better)
Translates to: CQICPCPGPYMAAALSCMLNLPA*SPPQGN
Trigger: GTTGCCCTGGGGAGGGGACCATGCGGGCAGATTCAG...CATGCAAGAGAGGGCGGCTGCCATATATGGGCCTGGGCAGGGACAGATCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR GCA 90 bp CAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTCCACTCTGGTGGTCTTaGAGCAGGGGCTGGTGCCAG +
Preference number: 2 (lower is better)
Translates to: QGSCDDGKSPGLLSQSHSPLWWS*SRGWCQ
Trigger: CTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGG...AGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR GCA 90 bp TCCCTGCTTAGGGCTTGGGTTTGGGGGCCCACTTCTTGCTCGCCCCACATCTCTGCAAGAGTCCGGGGCTaGTGTCCCAAAGTCACTCTG +
Preference number: 2 (lower is better)
Translates to: SLLRAWVWGPTSCSPHISARVRG*CPKVTL
Trigger: CAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGC...AGAGATGTGGGGCGAGCAAGAAGTGGGCCCCCAAACCCAAGCCCTAAGCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR CCA 90 bp CAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTTCTTGCAGCAGGGGCTaGTGCCAGCGATGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: QGSCDDGKSPGLLSQSHSSCSRG*CQRWPE
Trigger: CTCAGGCCATCGCTGGCACCAGCCCCTGCTGCAAGA...AGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR GCA 90 bp GGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGGCATTCCCTTGGGCCTaGCCTGGCCCCATTTCCAAG +
Preference number: 2 (lower is better)
Translates to: GSCDDGKSPGLLSQSHSVAFPWA*PGPISK
Trigger: CTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAATGC...CACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR GCA 90 bp CATCGCAGCTGTGCCCAGCAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCCCAAAGTCACTCTGTaGAGCCCTGTGCATTCCCTT +
Preference number: 2 (lower is better)
Translates to: HRSCAQQGSCDDGKSPGLPKVTL*SPVHSL
Trigger: AAGGGAATGCACAGGGCTGCACAGAGTGACTTTGGG...CAGCCCCGGACTCTTGCCATCATCACATGAGCCCTGCTGGGCACAGCTGCGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CCA 90 bp ATAGATGCCCTCTCTGGATGCTCCAGCATCCCACCTCAAGTGCCTACCACAGTGCCCTTGGGCCTGCCCTaGCCCCATTTCCAAGGCCAT +
Preference number: 2 (lower is better)
Translates to: IDALSGCSSIPPQVPTTVPLGLP*PHFQGH
Trigger: ATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGG...CACTGTGGTAGGCACTTGAGGTGGGATGCTGGAGCATCCAGAGAGGGCATCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR CCA 90 bp TCCCTGCTTAGGGCTTGGGTTTGGGGGCCCACTTCTTGCTCGCCCCACATCTCTCCATTCAGTGGCCAGTaGCCATGTGTCTCCTGGCAT +
Preference number: 2 (lower is better)
Translates to: SLLRAWVWGPTSCSPHISPFSGQ*PCVSWH
Trigger: ATGCCAGGAGACACATGGCCACTGGCCACTGAATGG...AGAGATGTGGGGCGAGCAAGAAGTGGGCCCCCAAACCCAAGCCCTAAGCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR TCA 90 bp GGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGATCTCCCACGCAGGCTaGCTGAGTTCACGGCACACA +
Preference number: 2 (lower is better)
Translates to: GSCDDGKSPGLLSQSHSVISHAG*LSSRHT
Trigger: TGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGAT...CACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR TCA 90 bp TGTCAGATCTGTCCCTGCCCAGGCCCATATATGGCAGCCGCCCTCTCTTGCATGCTCCTAATTGGTTCCTaGATCTGCCCGCATGGTCCC +
Preference number: 2 (lower is better)
Translates to: CQICPCPGPYMAAALSCMLLIGS*ICPHGP
Trigger: GGGACCATGCGGGCAGATTCAGGAACCAATTAGGAG...CATGCAAGAGAGGGCGGCTGCCATATATGGGCCTGGGCAGGGACAGATCTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR GCA 90 bp TGTCAGATCTGTCCCTGCCCAGGCCCATATATGGCAGCCGCCCTCTCTTGCATGCTTCTTCACCCTCCCTaGTTAGGGCTTGGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: CQICPCPGPYMAAALSCMLLHPP*LGLGFG
Trigger: CCCAAACCCAAGCCCTAAGCAGGGAGGGTGAAGAAG...CATGCAAGAGAGGGCGGCTGCCATATATGGGCCTGGGCAGGGACAGATCTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR CCA 90 bp CTGGTGGCCAGGGCTAGATCCCTGTCAGATCTGTCCCTGCCCAGGCCCATATATTCCTCAGGGTCAGGGTaGTGTGATGTTGCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: LVARARSLSDLSLPRPIYSSGSG*CDVAEL
Trigger: GAGCTCAGCAACATCACACCACCCTGACCCTGAGGA...ATATATGGGCCTGGGCAGGGACAGATCTGACAGGGATCTAGCCCTGGCCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR GCA 90 bp TGTCAGATCTGTCCCTGCCCAGGCCCATATATGGCAGCCGCCCTCTCTTGCATGGCTCACGACAATAGATaGCCTCTCTGGATGCTCCAG +
Preference number: 2 (lower is better)
Translates to: CQICPCPGPYMAAALSCMAHDNR*PLWMLQ
Trigger: CTGGAGCATCCAGAGAGGGCATCTATTGTCGTGAGC...CATGCAAGAGAGGGCGGCTGCCATATATGGGCCTGGGCAGGGACAGATCTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR GCA 90 bp TGTCAGATCTGTCCCTGCCCAGGCCCATATATGGCAGCCGCCCTCTCTTGCATGCTAATTTCCCACAACTaGCTCCTGACCTCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: CQICPCPGPYMAAALSCMLISHN*LLTSLL
Trigger: GAGCAGGGAGGTCAGGAGGCAGTTGTGGGAAATTAG...CATGCAAGAGAGGGCGGCTGCCATATATGGGCCTGGGCAGGGACAGATCTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR GCA 90 bp CCGGAAGTACTTGATGGCCTCAGGGTCTATGAAGGTCGGCTCTTCCCGGTAGCCAAGACCTTGCGCTTGTaGCGGAACTCAATGACCGTC +
Preference number: 2 (lower is better)
Translates to: PEVLDGLRVYEGRLFPVAKTLRL*RNSMTV
Trigger: GACGGTCATTGAGTTCCGGCACAAGCGCAAGGTCTT...GGCTACCGGGAAGAGCCGACCTTCATAGACCCTGAGGCCATCAAGTACTTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
3UTR-3UTR CCA 90 bp ATAGATGCCCTCTCTGGATGCTCCAGCATCCCACCTCAAGTGCCTACCACAGTGCACCTGACTGGCTTGTaGGTGCCAGCCATTCAGTGG +
Preference number: 2 (lower is better)
Translates to: IDALSGCSSIPPQVPTTVHLTGL*VPAIQW
Trigger: CCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTG...CACTGTGGTAGGCACTTGAGGTGGGATGCTGGAGCATCCAGAGAGGGCATCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR GCA 90 bp ATATATGGCAGCCGCCCTCTCTTGCATGAGGCCAAAGCCCAAATTCCTTGTTCTTCTGTGCTCCCTCCCTaGCACCCTGCAGTGTCTGGC +
Preference number: 2 (lower is better)
Translates to: IYGSRPLLHEAKAQIPCSSVLPP*HPAVSG
Trigger: GCCAGACACTGCAGGGTGGCAGGGAGGGAGCACAGA...AGAACAAGGAATTTGGGCTTTGGCCTCATGCAAGAGAGGGCGGCTGCCATATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR TCA 90 bp CTGGTGGCCAGGGCTAGATCCCTGTCAGATCTGTCCCTGCCCAGGCCCATATATTGGATAATGGCTGGATaGGTGATGGATGATGGATGG +
Preference number: 2 (lower is better)
Translates to: LVARARSLSDLSLPRPIYWIMAG*VMDDGW
Trigger: CCATCCATCATCCATCACTCATCCAGCCATTATCCA...ATATATGGGCCTGGGCAGGGACAGATCTGACAGGGATCTAGCCCTGGCCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR GCA 90 bp AAAGACCTTGCGCTTGTGCCGGAACTCAATGACCGTCTTGGTGTAGGAGTTGAGCGTGGTGACAGAGGCTaGCATGCAGCAGGTAAAGGA +
Preference number: 2 (lower is better)
Translates to: KDLALVPELNDRLGVGVERGDRG*HAAGKG
Trigger: TCCTTTACCTGCTGCATGGCAGCCTCTGTCACCACG...CTCAACTCCTACACCAAGACGGTCATTGAGTTCCGGCACAAGCGCAAGGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
3UTR-3UTR TCA 90 bp ATATATGGCAGCCGCCCTCTCTTGCATGAGGCCAAAGCCCAAATTCCTTGTTCTAGTAATGAGGATGTGTaGCACATGGAAGGAGGATGG +
Preference number: 2 (lower is better)
Translates to: IYGSRPLLHEAKAQIPCSSNEDV*HMEGGW
Trigger: CCATCCTCCTTCCATGTGTCACACATCCTCATTACT...AGAACAAGGAATTTGGGCTTTGGCCTCATGCAAGAGAGGGCGGCTGCCATATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR GCA 90 bp CCATATATGGCAGCCGCCCTCTCTTGCATGAGGCCAAAGCCCAAATTCCTTGTTTTCTGTGCCCATAGTTaGGGTGATCTTCCTCAAATG +
Preference number: 2 (lower is better)
Translates to: PYMAAALSCMRPKPKFLVFCAHS*GDLPQM
Trigger: CATTTGAGGAAGATCACCGCAACTATGGGCACAGAA...AACAAGGAATTTGGGCTTTGGCCTCATGCAAGAGAGGGCGGCTGCCATATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR CCA 90 bp CCTAATTTTCCTCCTCTTTATAATAAGAATCTGTTTCTCCAGGCATCTAAGCCCTCCCTGCTTAGGGCTTaGGTTTGGGGGCCCACTTCT +
Preference number: 2 (lower is better)
Translates to: PNFPPLYNKNLFLQASKPSLLRA*VWGPTS
Trigger: AGAAGTGGGCCCCCAAACCCAAGCCCTAAGCAGGGA...GGGCTTAGATGCCTGGAGAAACAGATTCTTATTATAAAGAGGAGGAAAATTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR CCA 72 bp CTGGGGGCACCACTCTGGTGGTCTTGCAGCAGGGGCTaGTGCCAGCGATGGCCTGAGGTCCGCGGGCCAGGT +
Preference number: 3 (lower is better)
Translates to: LGAPLWWSCSRG*CQRWPEVRGPG
Trigger: ACCTGGCCCGCGGACCTCAGGCCATCGCTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CAA 90 bp GCTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCGCCCTGTGCATTCCCTaGGGCCTGCCCTGGCCCCAT +
Preference number: 3 (lower is better)
Translates to: ALPLWAPDWLVGASHSVAALCIP*GLPWPH
Trigger: ATGGGGCCAGGGCAGGCCCAAGGGAATGCACAGGGC...GGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR CCA 72 bp GGCACACAGGCCAGGGTTCTGGGGGCACCACTCTGGTaGTCTTGCAGCAGGGGCTGGTGCCAGCGATGGCCT +
Preference number: 3 (lower is better)
Translates to: GTQARVLGAPLW*SCSRGWCQRWP
Trigger: AGGCCATCGCTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAGAACCCTGGCCTGTGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR TCA 72 bp GGCAGGACAGGCCTGGCATCTCCCACGCAGGCTGACTaGGTTCACGGCACACAGGCCAGGGTTCTGGGGGCA +
Preference number: 3 (lower is better)
Translates to: GRTGLASPTQAD*VHGTQARVLGA
Trigger: TGCCCCCAGAACCCTGGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CAA 90 bp ATTCCCTTGGGCCTGCCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGACCACTCTGGTGGTCTaGCAGCAGGGGCTGGTGCCA +
Preference number: 3 (lower is better)
Translates to: IPLGLPWPHFQGHGTQAATTLVV*QQGLVP
Trigger: TGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGT...CGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CAA 90 bp GGTGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGGCCCTGTGCATTCCCTaGGGCCTGCCCTGGCCCCAT +
Preference number: 3 (lower is better)
Translates to: GASHSVASGHVSPGIAAVALCIP*GLPWPH
Trigger: ATGGGGCCAGGGCAGGCCCAAGGGAATGCACAGGGC...CACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR TCA 72 bp GATGGGCAGGACAGGCCTGGCATCTCCCACGCAGGCTaGCTGAGTTCACGGCACACAGGCCAGGGTTCTGGG +
Preference number: 3 (lower is better)
Translates to: DGQDRPGISHAG*LSSRHTGQGSG
Trigger: CCCAGAACCCTGGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCCTGCCCATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR GCA 72 bp GCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTaGAGCCCTGTGCATTCCCTTGGGCCTGCCCTGGCC +
Preference number: 3 (lower is better)
Translates to: ARVRGCCPKVTL*SPVHSLGPALA
Trigger: GGCCAGGGCAGGCCCAAGGGAATGCACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR CCA 72 bp AGGCTGACTGAGTTCACGGCACACAGGCCAGGGTTCTaGGGGCACCACTCTGGTGGTCTTGCAGCAGGGGCT +
Preference number: 3 (lower is better)
Translates to: RLTEFTAHRPGF*GHHSGGLAAGA
Trigger: AGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAGAACCCTGGCCTGTGTGCCGTGAACTCAGTCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR CCA 72 bp GGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTaGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTG +
Preference number: 3 (lower is better)
Translates to: GHLTGLWVPAIQ*PVAMCLLASQL
Trigger: CAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR GCA 72 bp GGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTaGATTCCCTTGGGCCTGCCCTGGCCCCATTTCCAA +
Preference number: 3 (lower is better)
Translates to: GAAVPKSLCAAL*IPLGLPWPHFQ
Trigger: TTGGAAATGGGGCCAGGGCAGGCCCAAGGGAATGCACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR TCA 72 bp CTGCGGTCCACTCGCCAACTTCAGAAGGACCCTGGGTaGGAACAAGAGCTCCTAGATGCCTGGTGGCCAGGG +
Preference number: 3 (lower is better)
Translates to: LRSTRQLQKDPG*EQELLDAWWPG
Trigger: CCCTGGCCACCAGGCATCTAGGAGCTCTTGTTCTCACCCAGGGTCCTTCTGAAGTTGGCGAGTGGACCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR CCA 72 bp TGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTaGCATCGCAGCTGTGCCCAGCAGGGCTCATGTGAT +
Preference number: 3 (lower is better)
Translates to: CQPFSGQWPCVS*HRSCAQQGSCD
Trigger: ATCACATGAGCCCTGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR CCA 72 bp CCTCCTGCGGTCCACTCGCCAACTTCAGAAGGACCCTaGGTGAGAACAAGAGCTCCTAGATGCCTGGTGGCC +
Preference number: 3 (lower is better)
Translates to: PPAVHSPTSEGP*VRTRAPRCLVA
Trigger: GGCCACCAGGCATCTAGGAGCTCTTGTTCTCACCCAGGGTCCTTCTGAAGTTGGCGAGTGGACCGCAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR CAA 90 bp CAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTACCACTCTGGTGGTCTaGCAGCAGGGGCTGGTGCCA +
Preference number: 3 (lower is better)
Translates to: QGSCDDGKSPGLLSQSHSTTLVV*QQGLVP
Trigger: TGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGT...AGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR-3UTR CAA 90 bp AGGGTAAAGCCTCCTCAGGGTCAGGGTGGTGTGATGTTGCTGAGCTCTGAAGAGACCACTCTGGTGGTCTaGCAGCAGGGGCTGGTGCCA +
Preference number: 3 (lower is better)
Translates to: RVKPPQGQGGVMLLSSEETTLVV*QQGLVP
Trigger: TGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGT...CTCTTCAGAGCTCAGCAACATCACACCACCCTGACCCTGAGGAGGCTTTACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR CAA 90 bp AGGGTAAAGCCTCCTCAGGGTCAGGGTGGTGTGATGTTGCTGAGCTCTGAAGAGGGGCACCTGACTGGCTaGTGGGTGCCAGCCATTCAG +
Preference number: 3 (lower is better)
Translates to: RVKPPQGQGGVMLLSSEEGHLTG*WVPAIQ
Trigger: CTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCC...CTCTTCAGAGCTCAGCAACATCACACCACCCTGACCCTGAGGAGGCTTTACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR GCA 72 bp AGCAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTaGTGTCCCAAAGTCACTCTGTGCAGCCCTGTGCAT +
Preference number: 3 (lower is better)
Translates to: SRAHVMMARVRG*CPKVTLCSPVH
Trigger: ATGCACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
3UTR GCA 72 bp GAACCCAGGCTCACGACAATAGATGCCCTCTCTGGATaGTCCAGCATCCCACCTCAAGTGCCTACCACAGTG +
Preference number: 3 (lower is better)
Translates to: EPRLTTIDALSG*SSIPPQVPTTV
Trigger: CACTGTGGTAGGCACTTGAGGTGGGATGCTGGAGCATCCAGAGAGGGCATCTATTGTCGTGAGCCTGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR GCA 72 bp CCCTGCCCAGGCCCATATATGGCAGCCGCCCTCTCTTaGATGAGGCCAAAGCCCAAATTCCTTGTTCTGACA +
Preference number: 3 (lower is better)
Translates to: PCPGPYMAAALS*MRPKPKFLVLT
Trigger: TGTCAGAACAAGGAATTTGGGCTTTGGCCTCATGCAAGAGAGGGCGGCTGCCATATATGGGCCTGGGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR GCA 72 bp TCAGAAGGACCCTGGGTGAGAACAAGAGCTCCTAGATaGCTGGTGGCCAGGGCTAGATCCCTGTCAGATCTG +
Preference number: 3 (lower is better)
Translates to: SEGPWVRTRAPR*LVARARSLSDL
Trigger: CAGATCTGACAGGGATCTAGCCCTGGCCACCAGGCATCTAGGAGCTCTTGTTCTCACCCAGGGTCCTTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR GCA 72 bp CCCCATGTGTCAACTACAATCATCTCCTGGACCTCCTaGGGTCCACTCGCCAACTTCAGAAGGACCCTGGGT +
Preference number: 3 (lower is better)
Translates to: PHVSTTIISWTS*GPLANFRRTLG
Trigger: ACCCAGGGTCCTTCTGAAGTTGGCGAGTGGACCGCAGGAGGTCCAGGAGATGATTGTAGTTGACACATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR CCA 72 bp CTATTCCCTCCTAATTGGTTCCTGAATCTGCCCGCATaGTCCCCTCCCCAGGGCAACTTTCCTAAGCCAGCC +
Preference number: 3 (lower is better)
Translates to: LFPPNWFLNLPA*SPPQGNFPKPA
Trigger: GGCTGGCTTAGGAAAGTTGCCCTGGGGAGGGGACCATGCGGGCAGATTCAGGAACCAATTAGGAGGGAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR GCA 72 bp CTGACATTCAAGGCCTCAGTAGAGCTGGACCATAATTaGTCTCCCAGGCCCATTTCCAGCCCCGCCTTAAGC +
Preference number: 3 (lower is better)
Translates to: LTFKASVELDHN*SPRPISSPALS
Trigger: GCTTAAGGCGGGGCTGGAAATGGGCCTGGGAGAGCAATTATGGTCCAGCTCTACTGAGGCCTTGAATGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR TCA 72 bp TCCGTCTTCCCTATCCCCCAAGCTGACCCTGTAACCTaGGAGTCGTCACCAACTTTCCTCTTCTCCCACTCA +
Preference number: 3 (lower is better)
Translates to: SVFPIPQADPVT*ESSPTFLFSHS
Trigger: TGAGTGGGAGAAGAGGAAAGTTGGTGACGACTCTCAGGTTACAGGGTCAGCTTGGGGGATAGGGAAGACGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR TCA 72 bp GAACCACGAAGTCTCCGTCTTCCCTATCCCCCAAGCTaGCCCTGTAACCTGAGAGTCGTCACCAACTTTCCT +
Preference number: 3 (lower is better)
Translates to: EPRSLRLPYPPS*PCNLRVVTNFP
Trigger: AGGAAAGTTGGTGACGACTCTCAGGTTACAGGGTCAGCTTGGGGGATAGGGAAGACGGAGACTTCGTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR GCA 72 bp GATGCTCCAGCATCCCACCTCAAGTGCCTACCACAGTaGTTGGCACATAGTAGGGGCACAGTGAACTATATC +
Preference number: 3 (lower is better)
Translates to: DAPASHLKCLPQ*LAHSRGTVNYI
Trigger: GATATAGTTCACTGTGCCCCTACTATGTGCCAAGCACTGTGGTAGGCACTTGAGGTGGGATGCTGGAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR-3UTR CAA 90 bp TCAAATGTACACCCAGGCGCATCCCAGTCTGCTAAAAGCATCTCACTGCCCACTCAGGGTGGTGTGATGTaGCTGAGCTCTGAAGAGAAA +
Preference number: 3 (lower is better)
Translates to: SNVHPGASQSAKSISLPTQGGVM*LSSEEK
Trigger: TTTCTCTTCAGAGCTCAGCAACATCACACCACCCTG...AGTGGGCAGTGAGATGCTTTTAGCAGACTGGGATGCGCCTGGGTGTACATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR GCA 72 bp GAGAAGCATCTCCCACAACTATTCTGTGCCCATAGTTaGGGTGATCTTCCTCAAATGTACACCCAGGCGCAT +
Preference number: 3 (lower is better)
Translates to: EKHLPQLFCAHS*GDLPQMYTQAH
Trigger: ATGCGCCTGGGTGTACATTTGAGGAAGATCACCGCAACTATGGGCACAGAATAGTTGTGGGAGATGCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR CCA 72 bp TCTTGCCTGGCTGATGCCCAGACAATCTTCATGTCTTaGCTTAGACATCATTTTCTCAAAGGAGCCTCCCTA +
Preference number: 3 (lower is better)
Translates to: SCLADAQTIFMS*LRHHFLKGASL
Trigger: TAGGGAGGCTCCTTTGAGAAAATGATGTCTAAGCCAAGACATGAAGATTGTCTGGGCATCAGCCAGGCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR GCA 72 bp AGTCCTCTAATGTACTTTCTTTCCCTGCTATACTCTTaGCTGGCTGATGCCCAGACAATCTTCATGTCTTGG +
Preference number: 3 (lower is better)
Translates to: SPLMYFLSLLYS*LADAQTIFMSW
Trigger: CCAAGACATGAAGATTGTCTGGGCATCAGCCAGGCAAGAGTATAGCAGGGAAAGAAAGTACATTAGAGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
3UTR TCA 72 bp AAATTCTTCTGGGAAGGAATAAGGCCTCTTGGGAAATaGCTGAACTTGGAGTCAGGAGTCCTGATTCAAACC +
Preference number: 3 (lower is better)
Translates to: KFFWEGIRPLGK*LNLESGVLIQT
Trigger: GGTTTGAATCAGGACTCCTGACTCCAAGTTCAGTCATTTCCCAAGAGGCCTTATTCCTTCCCAGAAGAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp GCAGGGGCTGGTGCCAGCGATGGCCTGAGGTCCGCGGGCCAGGTTGAGGTCTTGCGTTGGCGCCCGAGTTaGGGCAGTTGGCGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: AGAGASDGLRSAGQVEVLRWRPS*GSWRAR
Trigger: GCGGGCGCGCCAACTGCCCCAACTCGGGCGCCAACG...CAAGACCTCAACCTGGCCCGCGGACCTCAGGCCATCGCTGGCACCAGCCCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp GCAGGGGCTGGTGCCAGCGATGGCCTGAGGTCCGCGGGCCAGGTTGAGGTCTTGGGTGCTGGCAGGGACTaGCCCTCATCATGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: AGAGASDGLRSAGQVEVLGAGRD*PSSWRC
Trigger: GCAGCGCCATGATGAGGGGCAGTCCCTGCCAGCACC...CAAGACCTCAACCTGGCCCGCGGACCTCAGGCCATCGCTGGCACCAGCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380897.7
CDS-3UTR CCA 90 bp GGGTTCTGGGGGCACCACTCTGGTGGTCTTGCAGCAGGGGCTGGTGCCAGCGATGGCTGGTGCCAGCGATaGCCTGAGGTCCGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: GFWGHHSGGLAAGAGASDGWCQR*PEVRGP
Trigger: TGGCCCGCGGACCTCAGGCCATCGCTGGCACCAGCC...ATCGCTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAGAACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GCCTGCTGTGTGACACCCCTGCAGTGCCTGCGCCACTGCCCCCTCCTTCAGGAAGGCTGGTGCCAGCGATaGCCTGAGGTCCGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: ACCVTPLQCLRHCPLLQEGWCQR*PEVRGP
Trigger: TGGCCCGCGGACCTCAGGCCATCGCTGGCACCAGCC...TTCCTGAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCACACAGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GGACAGGCCTGGCATCTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGCCACGCGAAGTTGGCAGCTaGCGCCCCGCGTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: GQAWHLPRRLTEFTAHRPREVGS*RPASAA
Trigger: GGCCGCTGACGCGGGGCGCCAGCTGCCAACTTCGCG...TGGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp GGACAGGCCTGGCATCTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGCCAGTGCCAGCGATGGCCTaGGGTCCGCGGGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GQAWHLPRRLTEFTAHRPVPAMA*GPRARL
Trigger: CAACCTGGCCCGCGGACCTCAGGCCATCGCTGGCAC...TGGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp ATTCCCTTGGGCCTGCCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGGTGACACCCCTGCAGTaGCTGCGCCACTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: IPLGLPWPHFQGHGTQAAVTPLQ*LRHCPL
Trigger: GAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCAC...CGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp GCCTGCTGTGTGACACCCCTGCAGTGCCTGCGCCACTGCCCCCTCCTTCAGGAAGTGACACCCCTGCAGTaGCTGCGCCACTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: ACCVTPLQCLRHCPLLQEVTPLQ*LRHCPL
Trigger: GAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCAC...TTCCTGAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCACACAGCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp TCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCAGGGCTTGGGGACCCGCTGCGTaGCCTGGCACCAGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: SVASGHVSPGIAAVPSRAWGPAA*PGTSAW
Trigger: CCACGCACTGGTGCCAGGGCACGCAGCGGGTCCCCA...AGCCCTGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp GCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCTGGGGACCCGCTGCGTaGCCTGGCACCAGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: ASHSVASGHVSPGIAAVPWGPAA*PGTSAW
Trigger: CCACGCACTGGTGCCAGGGCACGCAGCGGGTCCCCA...GGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GCATTCCCTTGGGCCTGCCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGACCCGCTGCGTGCCCTaGCACCAGTGCGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: AFPWACPGPISKAMGPRQTRCVP*HQCVVR
Trigger: CCTCACCACGCACTGGTGCCAGGGCACGCAGCGGGT...CTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp GCAGGGGCTGGTGCCAGCGATGGCCTGAGGTCCGCGGGCCAGGTTGAGGTCTTGTGGCGGCAGTCTAAGTaGAAGTCCTCCTCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: AGAGASDGLRSAGQVEVLWRQSK*KSSSLP
Trigger: CGGGAGCGAGGAGGACTTTCACTTAGACTGCCGCCA...CAAGACCTCAACCTGGCCCGCGGACCTCAGGCCATCGCTGGCACCAGCCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp GCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCAGTGCCAGCGATGGCCTaGGGTCCGCGGGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: AIQWPVAMCLLASQLCPAVPAMA*GPRARL
Trigger: CAACCTGGCCCGCGGACCTCAGGCCATCGCTGGCAC...TGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp GCTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCCCCACGCAGGCTGACTaGGTTCACGGCACACAGGCC +
Preference number: 4 (lower is better)
Translates to: ALPLWAPDWLVGASHSVAPTQAD*VHGTQA
Trigger: GGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGG...GGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp GGGTTCTGGGGGCACCACTCTGGTGGTCTTGCAGCAGGGGCTGGTGCCAGCGATGGCACCAGTGCGTGGTaGGGAAAGCGGTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: GFWGHHSGGLAAGAGASDGTSAW*GKRWWR
Trigger: TCGCCACCACCGCTTTCCTCACCACGCACTGGTGCC...ATCGCTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAGAACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp CTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCACACCCCTGCAGTGCCTaGGCCACTGCCCCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LCPSGHLTGLWVPAIQWPHPCSA*ATAPSF
Trigger: GAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTG...TGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp CCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATGGGCAGGACAGGCCCCACATCTCTTGCTTaGCTGGCCCCTGCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PWPHFQGHGTQAAMGRTGPTSLA*LAPALP
Trigger: GGGCAAGGCAGGGGCCAGGCAAGCAAGAGATGTGGG...GCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp GCAGGGGCTGGTGCCAGCGATGGCCTGAGGTCCGCGGGCCAGGTTGAGGTCTTGTGGGGGCCCACTTCTTaGTCGCCCCACATCTCTTGC +
Preference number: 4 (lower is better)
Translates to: AGAGASDGLRSAGQVEVLWGPTS*SPHISC
Trigger: GCAAGAGATGTGGGGCGAGCAAGAAGTGGGCCCCCA...CAAGACCTCAACCTGGCCCGCGGACCTCAGGCCATCGCTGGCACCAGCCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp GCCTGCTGTGTGACACCCCTGCAGTGCCTGCGCCACTGCCCCCTCCTTCAGGAAGGGGCACCACTCTGGTaGTCTTGCAGCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ACCVTPLQCLRHCPLLQEGAPLW*SCSRGW
Trigger: CCAGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCC...TTCCTGAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCACACAGCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp ATTCCCTTGGGCCTGCCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGCTGGGGGCACCACTCTaGTGGTCTTGCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: IPLGLPWPHFQGHGTQAALGAPL*WSCSRG
Trigger: GCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAG...CGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp CCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATGGGCAGGACAGGCCCCTTGGGCCTGCCCTaGCCCCATTTCCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: PWPHFQGHGTQAAMGRTGPLGLP*PHFQGH
Trigger: ATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGG...GCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GCAGGACAGGCCTGGCATCTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGACCCGCTGCGTGCCCTaGCACCAGTGCGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: AGQAWHLPRRLTEFTAHRTRCVP*HQCVVR
Trigger: CCTCACCACGCACTGGTGCCAGGGCACGCAGCGGGT...CCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp GCTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCGGCCTGAGAGCACCGTaGAGACAGCCGCGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: ALPLWAPDWLVGASHSVAGLRAP*RQPRRH
Trigger: ATGCCTTCGCGGCTGTCTTCACGGTGCTCTCAGGCC...GGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380897.7
ENST00000447459.7
CDS-3UTR TCA 90 bp CCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATGGGCAGGACAGGCTGGCCTCAGGGTCTATaGAGGTCGGCTCTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: PWPHFQGHGTQAAMGRTGWPQGL*RSALPG
Trigger: ACCGGGAAGAGCCGACCTTCATAGACCCTGAGGCCA...GCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp GCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCGTCCGCGGGCCAGGTTaGGGTCTTGGTCACACCCAG +
Preference number: 4 (lower is better)
Translates to: ASHSVASGHVSPGIAAVPVRGPG*GLGHTQ
Trigger: CTGGGTGTGACCAAGACCTCAACCTGGCCCGCGGAC...GGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp CCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATGGGCAGGACAGGCGCATTCCCTTGGGCCTaGCCTGGCCCCATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: PWPHFQGHGTQAAMGRTGAFPWA*PGPISK
Trigger: CTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAATGC...GCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp AGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCCACCCCTGCAGTGCCTaGGCCACTGCCCCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SHSVASGHVSPGIAAVPSHPCSA*ATAPSF
Trigger: GAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTG...GCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GCCTGCTGTGTGACACCCCTGCAGTGCCTGCGCCACTGCCCCCTCCTTCAGGAAGTTTCCAGCCCCTGTTaGTGCTGGCAGGGACTGCCC +
Preference number: 4 (lower is better)
Translates to: ACCVTPLQCLRHCPLLQEVSSPC*CWQGLP
Trigger: GGGCAGTCCCTGCCAGCACCAACAGGGGCTGGAAAC...TTCCTGAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCACACAGCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380897.7
CDS-3UTR CCA 90 bp CCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATGGGCAGGACAGGCTCCGCCATGTGTGGCTaGTGTCGGGCAGGGTATCTC +
Preference number: 4 (lower is better)
Translates to: PWPHFQGHGTQAAMGRTGSAMCG*CRAGYL
Trigger: GAGATACCCTGCCCGACACCAGCCACACATGGCGGA...GCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp CTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAGGGGCACCACTCTGGTaGTCTTGCAGCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LCPSGHLTGLWVPAIQWPGAPLW*SCSRGW
Trigger: CCAGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCC...TGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GCCTGCTGTGTGACACCCCTGCAGTGCCTGCGCCACTGCCCCCTCCTTCAGGAAAGGGCTCTGCCCCTCTaGGCACCTGACTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: ACCVTPLQCLRHCPLLQERALPL*APDWLV
Trigger: CACAAGCCAGTCAGGTGCCCAGAGGGGCAGAGCCCT...TTCCTGAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCACACAGCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp ATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTGCATCTCCGCGCGCGAAGTTaGCAGCTGGCGCCCCGCGTC +
Preference number: 4 (lower is better)
Translates to: MARVRGCCPKVTLCSPVHLRARS*QLAPRV
Trigger: GACGCGGGGCGCCAGCTGCCAACTTCGCGCGCGGAG...ATGCACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp GGACAGGCCTGGCATCTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGCCAGACCGAGGCTCACGGTaGCCTGGAACACCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: GQAWHLPRRLTEFTAHRPDRGSR*PGTPAC
Trigger: ACACGCAGGTGTTCCAGGTCACCGTGAGCCTCGGTC...TGGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp GCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCGACCGAGGCTCACGGTaGCCTGGAACACCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: ASHSVASGHVSPGIAAVPDRGSR*PGTPAC
Trigger: ACACGCAGGTGTTCCAGGTCACCGTGAGCCTCGGTC...GGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp GCCTGCTGTGTGACACCCCTGCAGTGCCTGCGCCACTGCCCCCTCCTTCAGGAATGGCCTCAGGGTCTATaGAGGTCGGCTCTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: ACCVTPLQCLRHCPLLQEWPQGL*RSALPG
Trigger: ACCGGGAAGAGCCGACCTTCATAGACCCTGAGGCCA...TTCCTGAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCACACAGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp CATCGCAGCTGTGCCCAGCAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGGTCCGCGGGCCAGGTTaGGGTCTTGGTCACACCCAG +
Preference number: 4 (lower is better)
Translates to: HRSCAQQGSCDDGKSPGLVRGPG*GLGHTQ
Trigger: CTGGGTGTGACCAAGACCTCAACCTGGCCCGCGGAC...CAGCCCCGGACTCTTGCCATCATCACATGAGCCCTGCTGGGCACAGCTGCGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp ATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTGCATGTGCCAGCGATGGCCTaGGGTCCGCGGGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: MARVRGCCPKVTLCSPVHVPAMA*GPRARL
Trigger: CAACCTGGCCCGCGGACCTCAGGCCATCGCTGGCAC...ATGCACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp AGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCCCCACGCAGGCTGACTaGGTTCACGGCACACAGGCC +
Preference number: 4 (lower is better)
Translates to: SHSVASGHVSPGIAAVPSPTQAD*VHGTQA
Trigger: GGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGG...GCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp CCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATGGGCAGGACAGGCATCTCCCACGCAGGCTaGCTGAGTTCACGGCACACA +
Preference number: 4 (lower is better)
Translates to: PWPHFQGHGTQAAMGRTGISHAG*LSSRHT
Trigger: TGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGAT...GCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp CTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCACAGCTGGCTGTCCCCTaGGCCCCTGAGACTCAAGAC +
Preference number: 4 (lower is better)
Translates to: LCPSGHLTGLWVPAIQWPQLAVP*APETQD
Trigger: GTCTTGAGTCTCAGGGGCTCAGGGGACAGCCAGCTG...TGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp GCAGGGGCTGGTGCCAGCGATGGCCTGAGGTCCGCGGGCCAGGTTGAGGTCTTGCGTGGTGACAGAGGCTaGCATGCAGCAGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: AGAGASDGLRSAGQVEVLRGDRG*HAAGKG
Trigger: TCCTTTACCTGCTGCATGGCAGCCTCTGTCACCACG...CAAGACCTCAACCTGGCCCGCGGACCTCAGGCCATCGCTGGCACCAGCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp CTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAGTCCACTCTGGTGGTCTTaGAGCAGGGGCTGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LPLWAPDWLVGASHSVASPLWWS*SRGWCQ
Trigger: CTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGG...ACTGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp CCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATGGGCAGGACAGGCGCAAGAGTCCGGGGCTaGTGTCCCAAAGTCACTCTG +
Preference number: 4 (lower is better)
Translates to: PWPHFQGHGTQAAMGRTGARVRG*CPKVTL
Trigger: CAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGC...GCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp GCAGGACAGGCCTGGCATCTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGCCCCTGCTGTGTGCCTaGTGTGTGACACCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AGQAWHLPRRLTEFTAHRPLLCA*CVTPLQ
Trigger: CTGCAGGGGTGTCACACAGCAGGCACACAGCAGGGG...CCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp GCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCGTGCCCTGGCACCAGTaGGTGGTGAGGAAAGCGGTG +
Preference number: 4 (lower is better)
Translates to: ASHSVASGHVSPGIAAVPVPWHQ*VVRKAV
Trigger: CACCGCTTTCCTCACCACGCACTGGTGCCAGGGCAC...GGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp ATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTGCATGGCTTGGGGACCCGCTaGGTGCCCTGGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: MARVRGCCPKVTLCSPVHGLGTR*VPWHQC
Trigger: GCACTGGTGCCAGGGCACGCAGCGGGTCCCCAAGCC...ATGCACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp CTGGTGGCCAGGGCTAGATCCCTGTCAGATCTGTCCCTGCCCAGGCCCATATATGGCTTGGGGACCCGCTaGGTGCCCTGGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: LVARARSLSDLSLPRPIYGLGTR*VPWHQC
Trigger: GCACTGGTGCCAGGGCACGCAGCGGGTCCCCAAGCC...ATATATGGGCCTGGGCAGGGACAGATCTGACAGGGATCTAGCCCTGGCCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp GCATTCCCTTGGGCCTGCCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGGGAATCCGCCATGTGTaGCTGGTGTCGGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: AFPWACPGPISKAMGPRQGIRHV*LVSGRV
Trigger: TACCCTGCCCGACACCAGCCACACATGGCGGATTCC...CTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp CATCGCAGCTGTGCCCAGCAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGGGGGCACCACTCTGGTaGTCTTGCAGCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HRSCAQQGSCDDGKSPGLGAPLW*SCSRGW
Trigger: CCAGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCC...CAGCCCCGGACTCTTGCCATCATCACATGAGCCCTGCTGGGCACAGCTGCGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GGACAGGCCTGGCATCTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGCCACACAGGCCAGGGTTCTaGGGGCACCACTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GQAWHLPRRLTEFTAHRPHRPGF*GHHSGG
Trigger: ACCACCAGAGTGGTGCCCCCAGAACCCTGGCCTGTG...TGGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GGGTTCTGGGGGCACCACTCTGGTGGTCTTGCAGCAGGGGCTGGTGCCAGCGATCCATTTCCAAGGCCATaGGACCCAGGCAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: GFWGHHSGGLAAGAGASDPFPRP*DPGSDG
Trigger: CCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGG...ATCGCTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAGAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp CTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAGTCCCTTGGGCCTGCCCTaGCCCCATTTCCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LPLWAPDWLVGASHSVASPLGLP*PHFQGH
Trigger: ATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGG...ACTGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GCAGGGGCTGGTGCCAGCGATGGCCTGAGGTCCGCGGGCCAGGTTGAGGTCTTGCCATTCAGTGGCCAGTaGCCATGTGTCTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: AGAGASDGLRSAGQVEVLPFSGQ*PCVSWH
Trigger: ATGCCAGGAGACACATGGCCACTGGCCACTGAATGG...CAAGACCTCAACCTGGCCCGCGGACCTCAGGCCATCGCTGGCACCAGCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp CCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATGGGCAGGACAGGCGTGCCAGCCATTCAGTaGCCAGTGGCCATGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PWPHFQGHGTQAAMGRTGVPAIQ*PVAMCL
Trigger: GAGACACATGGCCACTGGCCACTGAATGGCTGGCAC...GCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp CTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAAGGGCTCTGCCCCTCTaGGCACCTGACTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: LCPSGHLTGLWVPAIQWPRALPL*APDWLV
Trigger: CACAAGCCAGTCAGGTGCCCAGAGGGGCAGAGCCCT...TGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCGTTGGCGCCCGAGTTaGGGCAGTTGGCGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: GSCDDGKSPGLLSQSHSVRWRPS*GSWRAR
Trigger: GCGGGCGCGCCAACTGCCCCAACTCGGGCGCCAACG...CACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GCTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCGAGCTCCTAGATGCCTaGTGGCCAGGGCTAGATCCC +
Preference number: 4 (lower is better)
Translates to: ALPLWAPDWLVGASHSVAELLDA*WPGLDP
Trigger: GGGATCTAGCCCTGGCCACCAGGCATCTAGGAGCTC...GGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp ATTCCCTTGGGCCTGCCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGACCCCTCGGAGATGCTaGTGCTCCTATCGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: IPLGLPWPHFQGHGTQAATPRRC*CSYRWV
Trigger: AACCCAGCGATAGGAGCATCAGCATCTCCGAGGGGT...CGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380897.7
CDS-3UTR TCA 90 bp CTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCATGGCGGCAGTCTAAGTaGAAGTCCTCCTCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LCPSGHLTGLWVPAIQWPWRQSK*KSSSLP
Trigger: CGGGAGCGAGGAGGACTTTCACTTAGACTGCCGCCA...TGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp GCTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCCGGTGTGGAAATTCCTaGAGAGGAAGCGGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: ALPLWAPDWLVGASHSVARCGNS*RGSGRR
Trigger: GCGACGACCGCTTCCTCTTCAGGAATTTCCACACCG...GGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp CTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAGTTTTCACCAAGCCCGCTaGGCTCCTCCTCGCACGAGT +
Preference number: 4 (lower is better)
Translates to: LPLWAPDWLVGASHSVASFHQAR*APPRTS
Trigger: ACTCGTGCGAGGAGGAGCTCAGCGGGCTTGGTGAAA...ACTGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp CCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATGGGCAGGACAGGCGTGACCTGGAACACCTaGGTGTACATCATGTGGGCG +
Preference number: 4 (lower is better)
Translates to: PWPHFQGHGTQAAMGRTGVTWNT*VYIMWA
Trigger: CGCCCACATGATGTACACGCAGGTGTTCCAGGTCAC...GCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp GCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCACCACTCTGGTGGTCTTaGAGCAGGGGCTGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: AIQWPVAMCLLASQLCPAPLWWS*SRGWCQ
Trigger: CTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGG...TGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp GGACAGGCCTGGCATCTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGCCAGCATTCCCTTGGGCCTaGCCTGGCCCCATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: GQAWHLPRRLTEFTAHRPAFPWA*PGPISK
Trigger: CTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAATGC...TGGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp CATCGCAGCTGTGCCCAGCAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTCTGTGCAGCCCTGTaGATTCCCTTGGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: HRSCAQQGSCDDGKSPGLLCAAL*IPLGLP
Trigger: GGGCAGGCCCAAGGGAATGCACAGGGCTGCACAGAG...CAGCCCCGGACTCTTGCCATCATCACATGAGCCCTGCTGGGCACAGCTGCGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp GCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCACAGGAAGCCACTCTCTaGCCCCCAAAGGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AIQWPVAMCLLASQLCPAQEATL*PPKGSA
Trigger: GGCAGAGCCCTTTGGGGGGCAGAGAGTGGCTTCCTG...TGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp GGTGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCAGGAAGCCACTCTCTaGCCCCCAAAGGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GASHSVASGHVSPGIAAVQEATL*PPKGSA
Trigger: GGCAGAGCCCTTTGGGGGGCAGAGAGTGGCTTCCTG...CACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp CAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTAGCCCGGAGCGCGAGTaGACCTCGGCTAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: QGSCDDGKSPGLLSQSHSSPERE*TSARSR
Trigger: GCGGCTCCTAGCCGAGGTGCACTCGCGCTCCGGGCT...AGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp CTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAGTTGCTTGCCTGGCCCCTaGCTTGCCCACTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LPLWAPDWLVGASHSVASCLPGP*LAHSLE
Trigger: TTCCAGAGAGTGGGCAAGGCAGGGGCCAGGCAAGCA...ACTGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp GCAGGGGCTGGTGCCAGCGATGGCCTGAGGTCCGCGGGCCAGGTTGAGGTCTTGTCCCTGCTATACTCTTaGCTGGCTGATGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: AGAGASDGLRSAGQVEVLSLLYS*LADAQT
Trigger: TGTCTGGGCATCAGCCAGGCAAGAGTATAGCAGGGA...CAAGACCTCAACCTGGCCCGCGGACCTCAGGCCATCGCTGGCACCAGCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp GCCTGCTGTGTGACACCCCTGCAGTGCCTGCGCCACTGCCCCCTCCTTCAGGAAGCAGCCGCCCTCTCTTaGATGAGGCCAAAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: ACCVTPLQCLRHCPLLQEAAALS*MRPKPK
Trigger: TTTGGGCTTTGGCCTCATGCAAGAGAGGGCGGCTGC...TTCCTGAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCACACAGCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp GCTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCCTGTCGGTTCAGCTCTaGTGCTTCCTGTGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: ALPLWAPDWLVGASHSVALSVQL*CFLCGA
Trigger: AGCTCCGCACAGGAAGCACCAGAGCTGAACCGACAG...GGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp AGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCTCTTGCAGCAGGGGCTaGTGCCAGCGATGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SHSVASGHVSPGIAAVPSSCSRG*CQRWPE
Trigger: CTCAGGCCATCGCTGGCACCAGCCCCTGCTGCAAGA...GCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp CATCGCAGCTGTGCCCAGCAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGTCTTGCAGCAGGGGCTaGTGCCAGCGATGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: HRSCAQQGSCDDGKSPGLSCSRG*CQRWPE
Trigger: CTCAGGCCATCGCTGGCACCAGCCCCTGCTGCAAGA...CAGCCCCGGACTCTTGCCATCATCACATGAGCCCTGCTGGGCACAGCTGCGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp CACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGGGGCACCACTCTaGTGGTCTTGCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: HLTGLWVPAIQWPVAMCLLGAPL*WSCSRG
Trigger: GCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAG...GAGACACATGGCCACTGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp AGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCCACAGGCCAGGGTTCTaGGGGCACCACTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SHSVASGHVSPGIAAVPSHRPGF*GHHSGG
Trigger: ACCACCAGAGTGGTGCCCCCAGAACCCTGGCCTGTG...GCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCTGGCCATGTGTCTCCTaGCATCGCAGCTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: ASHSVASGHVSPGIAAVPWPCVS*HRSCAQ
Trigger: CTGGGCACAGCTGCGATGCCAGGAGACACATGGCCA...GGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GCAGGACAGGCCTGGCATCTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGCATCTCTTGCTTGCCTaGCCCCTGCCTTGCCCACTC +
Preference number: 4 (lower is better)
Translates to: AGQAWHLPRRLTEFTAHRHLLLA*PLPCPL
Trigger: GAGTGGGCAAGGCAGGGGCCAGGCAAGCAAGAGATG...CCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp CCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATGGGCAGGACAGGCTCCTCAGGGTCAGGGTaGTGTGATGTTGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PWPHFQGHGTQAAMGRTGSSGSG*CDVAEL
Trigger: GAGCTCAGCAACATCACACCACCCTGACCCTGAGGA...GCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp GGTGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCTGAATCTGCCCGCATaGTCCCCTCCCCAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: GASHSVASGHVSPGIAAVLNLPA*SPPQGN
Trigger: GTTGCCCTGGGGAGGGGACCATGCGGGCAGATTCAG...CACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp AGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCTGGCGGCAGTCTAAGTaGAAGTCCTCCTCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: SHSVASGHVSPGIAAVPSWRQSK*KSSSLP
Trigger: CGGGAGCGAGGAGGACTTTCACTTAGACTGCCGCCA...GCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp CTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAGTATCTCCCACGCAGGCTaGCTGAGTTCACGGCACACA +
Preference number: 4 (lower is better)
Translates to: LPLWAPDWLVGASHSVASISHAG*LSSRHT
Trigger: TGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGAT...ACTGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp GCCTGCTGTGTGACACCCCTGCAGTGCCTGCGCCACTGCCCCCTCCTTCAGGAACCGGGGCCAGGTCAATaGAGCTGCGACATTTTTCAC +
Preference number: 4 (lower is better)
Translates to: ACCVTPLQCLRHCPLLQEPGPGQ*SCDIFH
Trigger: GTGAAAAATGTCGCAGCTTCATTGACCTGGCCCCGG...TTCCTGAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCACACAGCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp GGTGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGTCGGTTCAGCTCTGGTaGTTCCTGTGCGGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: GASHSVASGHVSPGIAAVSVQLW*FLCGAP
Trigger: CGGAGCTCCGCACAGGAAGCACCAGAGCTGAACCGA...CACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGCACC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp GGACAGGCCTGGCATCTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGCCAGCAAGAGTCCGGGGCTaGTGTCCCAAAGTCACTCTG +
Preference number: 4 (lower is better)
Translates to: GQAWHLPRRLTEFTAHRPARVRG*CPKVTL
Trigger: CAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGC...TGGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp TCCCTGCTTAGGGCTTGGGTTTGGGGGCCCACTTCTTGCTCGCCCCACATCTCTGTGCCCTGGCACCAGTaGGTGGTGAGGAAAGCGGTG +
Preference number: 4 (lower is better)
Translates to: SLLRAWVWGPTSCSPHISVPWHQ*VVRKAV
Trigger: CACCGCTTTCCTCACCACGCACTGGTGCCAGGGCAC...AGAGATGTGGGGCGAGCAAGAAGTGGGCCCCCAAACCCAAGCCCTAAGCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp GCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCGAGGCCTTTCTCCGATaGCGGGGCCAGGTCAATGAA +
Preference number: 4 (lower is better)
Translates to: ASHSVASGHVSPGIAAVPEAFLR*RGQVNE
Trigger: TTCATTGACCTGGCCCCGGCATCGGAGAAAGGCCTC...GGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395724.7
CDS-3UTR CCA 90 bp CTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCACTGTCGGTTCAGCTCTaGTGCTTCCTGTGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: LCPSGHLTGLWVPAIQWPLSVQL*CFLCGA
Trigger: AGCTCCGCACAGGAAGCACCAGAGCTGAACCGACAG...TGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTCTGGGGGCACCACTCTaGTGGTCTTGCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: DDGKSPGLLSQSHSVQPCLGAPL*WSCSRG
Trigger: GCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAG...ACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp TCCCTGCTTAGGGCTTGGGTTTGGGGGCCCACTTCTTGCTCGCCCCACATCTCTCACAGGCCAGGGTTCTaGGGGCACCACTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SLLRAWVWGPTSCSPHISHRPGF*GHHSGG
Trigger: ACCACCAGAGTGGTGCCCCCAGAACCCTGGCCTGTG...AGAGATGTGGGGCGAGCAAGAAGTGGGCCCCCAAACCCAAGCCCTAAGCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp GCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCACCATTTCCAAGGCCATaGGACCCAGGCAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: AIQWPVAMCLLASQLCPAPFPRP*DPGSDG
Trigger: CCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGG...TGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GCAGGACAGGCCTGGCATCTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGTCCCTGCTTAGGGCTTaGGTTTGGGGGCCCACTTCT +
Preference number: 4 (lower is better)
Translates to: AGQAWHLPRRLTEFTAHRSLLRA*VWGPTS
Trigger: AGAAGTGGGCCCCCAAACCCAAGCCCTAAGCAGGGA...CCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp CCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATGGGCAGGACAGGCAATAGATGCCCTCTCTaGATGCTCCAGCATCCCACC +
Preference number: 4 (lower is better)
Translates to: PWPHFQGHGTQAAMGRTGNRCPL*MLQHPT
Trigger: GGTGGGATGCTGGAGCATCCAGAGAGGGCATCTATT...GCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp ATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTGCATGGCCTGAGAGCACCGTaGAGACAGCCGCGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: MARVRGCCPKVTLCSPVHGLRAP*RQPRRH
Trigger: ATGCCTTCGCGGCTGTCTTCACGGTGCTCTCAGGCC...ATGCACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380897.7
ENST00000447459.7
CDS-3UTR TCA 90 bp TCCCTGCTTAGGGCTTGGGTTTGGGGGCCCACTTCTTGCTCGCCCCACATCTCTTTTCACCAAGCCCGCTaGGCTCCTCCTCGCACGAGT +
Preference number: 4 (lower is better)
Translates to: SLLRAWVWGPTSCSPHISFHQAR*APPRTS
Trigger: ACTCGTGCGAGGAGGAGCTCAGCGGGCTTGGTGAAA...AGAGATGTGGGGCGAGCAAGAAGTGGGCCCCCAAACCCAAGCCCTAAGCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp CTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAGTGGCTCCACTGCCCTCTaGTGCCTAATTTCCCACAAC +
Preference number: 4 (lower is better)
Translates to: LPLWAPDWLVGASHSVASGSTAL*CLISHN
Trigger: GTTGTGGGAAATTAGGCATCAGAGGGCAGTGGAGCC...ACTGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp CTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAGTCTCCTAATTGGTTCCTaGATCTGCCCGCATGGTCCC +
Preference number: 4 (lower is better)
Translates to: LPLWAPDWLVGASHSVASLLIGS*ICPHGP
Trigger: GGGACCATGCGGGCAGATTCAGGAACCAATTAGGAG...ACTGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp GCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCACCGCCCTCTCTTGCATaGGGCCAAAGCCCAAATTCC +
Preference number: 4 (lower is better)
Translates to: AIQWPVAMCLLASQLCPAPPSLA*GQSPNS
Trigger: GGAATTTGGGCTTTGGCCTCATGCAAGAGAGGGCGG...TGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp CTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCACGTGGTGACAGAGGCTaGCATGCAGCAGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: LCPSGHLTGLWVPAIQWPRGDRG*HAAGKG
Trigger: TCCTTTACCTGCTGCATGGCAGCCTCTGTCACCACG...TGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp ATTCCCTTGGGCCTGCCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGAAGACCTTGCGCTTGTaGCGGAACTCAATGACCGTC +
Preference number: 4 (lower is better)
Translates to: IPLGLPWPHFQGHGTQAAKTLRL*RNSMTV
Trigger: GACGGTCATTGAGTTCCGGCACAAGCGCAAGGTCTT...CGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp GGGTTCTGGGGGCACCACTCTGGTGGTCTTGCAGCAGGGGCTGGTGCCAGCGATCCCAAAGTCACTCTGTaGAGCCCTGTGCATTCCCTT +
Preference number: 4 (lower is better)
Translates to: GFWGHHSGGLAAGAGASDPKVTL*SPVHSL
Trigger: AAGGGAATGCACAGGGCTGCACAGAGTGACTTTGGG...ATCGCTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAGAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp GCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCAGCAAGAGTCCGGGGCTaGTGTCCCAAAGTCACTCTG +
Preference number: 4 (lower is better)
Translates to: AIQWPVAMCLLASQLCPAARVRG*CPKVTL
Trigger: CAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGC...TGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp AGGGTAAAGCCTCCTCAGGGTCAGGGTGGTGTGATGTTGCTGAGCTCTGAAGAGGTGACACCCCTGCAGTaGCTGCGCCACTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: RVKPPQGQGGVMLLSSEEVTPLQ*LRHCPL
Trigger: GAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCAC...CTCTTCAGAGCTCAGCAACATCACACCACCCTGACCCTGAGGAGGCTTTACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp TGTCAGATCTGTCCCTGCCCAGGCCCATATATGGCAGCCGCCCTCTCTTGCATGTCTGTGCTCCCTCCCTaGCACCCTGCAGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: CQICPCPGPYMAAALSCMSVLPP*HPAVSG
Trigger: GCCAGACACTGCAGGGTGGCAGGGAGGGAGCACAGA...CATGCAAGAGAGGGCGGCTGCCATATATGGGCCTGGGCAGGGACAGATCTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp GGGTTCTGGGGGCACCACTCTGGTGGTCTTGCAGCAGGGGCTGGTGCCAGCGATAAGTGCCTACCACAGTaGTTGGCACATAGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: GFWGHHSGGLAAGAGASDKCLPQ*LAHSRG
Trigger: GCCCCTACTATGTGCCAAGCACTGTGGTAGGCACTT...ATCGCTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAGAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp GGACAGGCCTGGCATCTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGCCAAGGCTCACGGTGACCTaGAACACCTGCGTGTACATC +
Preference number: 4 (lower is better)
Translates to: GQAWHLPRRLTEFTAHRPRLTVT*NTCVYI
Trigger: GATGTACACGCAGGTGTTCCAGGTCACCGTGAGCCT...TGGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GGTGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCTGTCGGTTCAGCTCTaGTGCTTCCTGTGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: GASHSVASGHVSPGIAAVLSVQL*CFLCGA
Trigger: AGCTCCGCACAGGAAGCACCAGAGCTGAACCGACAG...CACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGCACC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GCAGGACAGGCCTGGCATCTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGCCATTCAGTGGCCAGTaGCCATGTGTCTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: AGQAWHLPRRLTEFTAHRPFSGQ*PCVSWH
Trigger: ATGCCAGGAGACACATGGCCACTGGCCACTGAATGG...CCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCCCATTCAGTGGCCAGTaGCCATGTGTCTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: ASHSVASGHVSPGIAAVPPFSGQ*PCVSWH
Trigger: ATGCCAGGAGACACATGGCCACTGGCCACTGAATGG...GGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp CATCGCAGCTGTGCCCAGCAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCACCTGACTGGCTTGTaGGTGCCAGCCATTCAGTGG +
Preference number: 4 (lower is better)
Translates to: HRSCAQQGSCDDGKSPGLHLTGL*VPAIQW
Trigger: CCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTG...CAGCCCCGGACTCTTGCCATCATCACATGAGCCCTGCTGGGCACAGCTGCGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GGTGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCACCTGACTGGCTTGTaGGTGCCAGCCATTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GASHSVASGHVSPGIAAVHLTGL*VPAIQW
Trigger: CCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTG...CACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGCACC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp TCCCTGCTTAGGGCTTGGGTTTGGGGGCCCACTTCTTGCTCGCCCCACATCTCTCTCTGGGCACCTGACTaGCTTGTGGGTGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: SLLRAWVWGPTSCSPHISLWAPD*LVGASH
Trigger: ATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAG...AGAGATGTGGGGCGAGCAAGAAGTGGGCCCCCAAACCCAAGCCCTAAGCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp AAGCCTCCTCAGGGTCAGGGTGGTGTGATGTTGCTGAGCTCTGAAGAGAAATGTCTCCGCGCGCGAAGTTaGCAGCTGGCGCCCCGCGTC +
Preference number: 4 (lower is better)
Translates to: KPPQGQGGVMLLSSEEKCLRARS*QLAPRV
Trigger: GACGCGGGGCGCCAGCTGCCAACTTCGCGCGCGGAG...ACATTTCTCTTCAGAGCTCAGCAACATCACACCACCCTGACCCTGAGGAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp AGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCGCCTTGCCCACTCTCTaGAATACAAGGCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SHSVASGHVSPGIAAVPSALPTL*NTRQPC
Trigger: GCAGGGCTGCCTTGTATTCCAGAGAGTGGGCAAGGC...GCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp AGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCCTTAGGGCTTGGGTTTaGGGGCCCACTTCTTGCTCG +
Preference number: 4 (lower is better)
Translates to: SHSVASGHVSPGIAAVPSLRAWV*GPTSCS
Trigger: CGAGCAAGAAGTGGGCCCCCAAACCCAAGCCCTAAG...GCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp AAAGGAGCCCCACGCCAGGCAGAAGGACCACCCGTAGTCCCAGGAATGGGGTCTAAAGCTGAGGCAGAGTaGCCAGGGAGGCTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: KGAPRQAEGPPVVPGMGSKAEAE*PGRLRE
Trigger: TTCCCTCAGCCTCCCTGGCCACTCTGCCTCAGCTTT...AGACCCCATTCCTGGGACTACGGGTGGTCCTTCTGCCTGGCGTGGGGCTCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR TCA 90 bp TCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCAGGGCTTGTGCCGGAACTCAATaGCCGTCTTGGTGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: SVASGHVSPGIAAVPSRACAGTQ*PSWCRS
Trigger: ACTCCTACACCAAGACGGTCATTGAGTTCCGGCACA...AGCCCTGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp AGGGTAAAGCCTCCTCAGGGTCAGGGTGGTGTGATGTTGCTGAGCTCTGAAGAGGGCACCAGTGCGTGGTaGGGAAAGCGGTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: RVKPPQGQGGVMLLSSEEGTSAW*GKRWWR
Trigger: TCGCCACCACCGCTTTCCTCACCACGCACTGGTGCC...CTCTTCAGAGCTCAGCAACATCACACCACCCTGACCCTGAGGAGGCTTTACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp TCGGCTCTTCCCGGTAGCCCTGCTCAAAGACCTTGCGCTTGTGCCGGAACTCAATTTCACCAAGCCCGCTaGGCTCCTCCTCGCACGAGT +
Preference number: 4 (lower is better)
Translates to: SALPGSPAQRPCACAGTQFHQAR*APPRTS
Trigger: ACTCGTGCGAGGAGGAGCTCAGCGGGCTTGGTGAAA...TTGAGTTCCGGCACAAGCGCAAGGTCTTTGAGCAGGGCTACCGGGAAGAGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR TCA 90 bp GCCTGCTGTGTGACACCCCTGCAGTGCCTGCGCCACTGCCCCCTCCTTCAGGAAGCACAGCTGGATGGTTaGGTAATGAGGATGTGTGAC +
Preference number: 4 (lower is better)
Translates to: ACCVTPLQCLRHCPLLQEAQLDG*VMRMCD
Trigger: GTCACACATCCTCATTACTCAACCATCCAGCTGTGC...TTCCTGAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCACACAGCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp AAAGGAGCCCCACGCCAGGCAGAAGGACCACCCGTAGTCCCAGGAATGGGGTCTCGTGGAGTCTTCAACTaGGAGCACCGTGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: KGAPRQAEGPPVVPGMGSRGVFN*EHREDS
Trigger: GCTGTCTTCACGGTGCTCTCAGTTGAAGACTCCACG...AGACCCCATTCCTGGGACTACGGGTGGTCCTTCTGCCTGGCGTGGGGCTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR TCA 90 bp GAAGGTCGGCTCTTCCCGGTAGCCCTGCTCAAAGACCTTGCGCTTGTGCCGGAAACCAGCAAAGAAAGCTaGGGCAGAGTGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: EGRLFPVALLKDLALVPETSKES*GRVARE
Trigger: CTCCCTGGCCACTCTGCCTCAGCTTTCTTTGCTGGT...TTCCGGCACAAGCGCAAGGTCTTTGAGCAGGGCTACCGGGAAGAGCCGACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR GCA 90 bp AGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCGTGACCTGGAACACCTaGGTGTACATCATGTGGGCG +
Preference number: 4 (lower is better)
Translates to: SHSVASGHVSPGIAAVPSVTWNT*VYIMWA
Trigger: CGCCCACATGATGTACACGCAGGTGTTCCAGGTCAC...GCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp CATCGCAGCTGTGCCCAGCAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGGTGACCTGGAACACCTaGGTGTACATCATGTGGGCG +
Preference number: 4 (lower is better)
Translates to: HRSCAQQGSCDDGKSPGLVTWNT*VYIMWA
Trigger: CGCCCACATGATGTACACGCAGGTGTTCCAGGTCAC...CAGCCCCGGACTCTTGCCATCATCACATGAGCCCTGCTGGGCACAGCTGCGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp TCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCAGGGCTAAGACCTTGCGCTTGTaGCGGAACTCAATGACCGTC +
Preference number: 4 (lower is better)
Translates to: SVASGHVSPGIAAVPSRAKTLRL*RNSMTV
Trigger: GACGGTCATTGAGTTCCGGCACAAGCGCAAGGTCTT...AGCCCTGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp TCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCAGGGCTCCTGCTCAAAGACCTTaGGCTTGTGCCGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: SVASGHVSPGIAAVPSRAPAQRP*ACAGTQ
Trigger: TTGAGTTCCGGCACAAGCGCAAGGTCTTTGAGCAGG...AGCCCTGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp ATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTGCATTCGGTTCAGCTCTGGTaGTTCCTGTGCGGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: MARVRGCCPKVTLCSPVHSVQLW*FLCGAP
Trigger: CGGAGCTCCGCACAGGAAGCACCAGAGCTGAACCGA...ATGCACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp GGACAGGCCTGGCATCTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGCCACCCAAAGTCACTCTGTaGAGCCCTGTGCATTCCCTT +
Preference number: 4 (lower is better)
Translates to: GQAWHLPRRLTEFTAHRPPKVTL*SPVHSL
Trigger: AAGGGAATGCACAGGGCTGCACAGAGTGACTTTGGG...TGGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp GGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCCCCTGCTGTGTGCCTaGTGTGTGACACCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GSCDDGKSPGLLSQSHSVPLLCA*CVTPLQ
Trigger: CTGCAGGGGTGTCACACAGCAGGCACACAGCAGGGG...CACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp ATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTGCATTCGCCCCACATCTCTTaGTTGCCTGGCCCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: MARVRGCCPKVTLCSPVHSPHIS*LPGPCL
Trigger: AAGGCAGGGGCCAGGCAAGCAAGAGATGTGGGGCGA...ATGCACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp GCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCACTGCCCACTCCCCATTaGCCCAGGGTAAACTCTAAG +
Preference number: 4 (lower is better)
Translates to: AIQWPVAMCLLASQLCPALPTPH*PRVNSK
Trigger: CTTAGAGTTTACCCTGGGGCAATGGGGAGTGGGCAG...TGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp GCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCGAGCTGGACCATAATTaGTCTCCCAGGCCCATTTCC +
Preference number: 4 (lower is better)
Translates to: ASHSVASGHVSPGIAAVPELDHN*SPRPIS
Trigger: GGAAATGGGCCTGGGAGAGCAATTATGGTCCAGCTC...GGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp CAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTAGCCCCTGTTGGTGCTaGCAGGGACTGCCCCTCATC +
Preference number: 4 (lower is better)
Translates to: QGSCDDGKSPGLLSQSHSSPCWC*QGLPLI
Trigger: GATGAGGGGCAGTCCCTGCCAGCACCAACAGGGGCT...AGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380897.7
CDS-3UTR CCA 90 bp AGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCAGGCTCACGGTGACCTaGAACACCTGCGTGTACATC +
Preference number: 4 (lower is better)
Translates to: SHSVASGHVSPGIAAVPSRLTVT*NTCVYI
Trigger: GATGTACACGCAGGTGTTCCAGGTCACCGTGAGCCT...GCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTTCCGCCATGTGTGGCTaGTGTCGGGCAGGGTATCTC +
Preference number: 4 (lower is better)
Translates to: DDGKSPGLLSQSHSVQPCSAMCG*CRAGYL
Trigger: GAGATACCCTGCCCGACACCAGCCACACATGGCGGA...ACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp CTGGTGGCCAGGGCTAGATCCCTGTCAGATCTGTCCCTGCCCAGGCCCATATATTCCGCCATGTGTGGCTaGTGTCGGGCAGGGTATCTC +
Preference number: 4 (lower is better)
Translates to: LVARARSLSDLSLPRPIYSAMCG*CRAGYL
Trigger: GAGATACCCTGCCCGACACCAGCCACACATGGCGGA...ATATATGGGCCTGGGCAGGGACAGATCTGACAGGGATCTAGCCCTGGCCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp GATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTGGAATCCGCCATGTGTaGCTGGTGTCGGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: DDGKSPGLLSQSHSVQPCGIRHV*LVSGRV
Trigger: TACCCTGCCCGACACCAGCCACACATGGCGGATTCC...ACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGTCTTGCAGCAGGGGCTaGTGCCAGCGATGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GSCDDGKSPGLLSQSHSVSCSRG*CQRWPE
Trigger: CTCAGGCCATCGCTGGCACCAGCCCCTGCTGCAAGA...CACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp ATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTGCATCCATTTCCAAGGCCATaGGACCCAGGCAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: MARVRGCCPKVTLCSPVHPFPRP*DPGSDG
Trigger: CCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGG...ATGCACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTTGGCCATGTGTCTCCTaGCATCGCAGCTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: DDGKSPGLLSQSHSVQPCWPCVS*HRSCAQ
Trigger: CTGGGCACAGCTGCGATGCCAGGAGACACATGGCCA...ACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTCTCTGGGCACCTGACTaGCTTGTGGGTGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: DDGKSPGLLSQSHSVQPCLWAPD*LVGASH
Trigger: ATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAG...ACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp ATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTGCATTGCAGTGTCTGGCCCTaGCCTCTGCACAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: MARVRGCCPKVTLCSPVHCSVWP*PLHSLC
Trigger: GCAGAGACTGTGCAGAGGCCAGGGCCAGACACTGCA...ATGCACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp GATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTATCTCCCACGCAGGCTaGCTGAGTTCACGGCACACA +
Preference number: 4 (lower is better)
Translates to: DDGKSPGLLSQSHSVQPCISHAG*LSSRHT
Trigger: TGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGAT...ACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR TCA 90 bp CCGGAAGTACTTGATGGCCTCAGGGTCTATGAAGGTCGGCTCTTCCCGGTAGCCCGGTGTGGAAATTCCTaGAGAGGAAGCGGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: PEVLDGLRVYEGRLFPVARCGNS*RGSGRR
Trigger: GCGACGACCGCTTCCTCTTCAGGAATTTCCACACCG...GGCTACCGGGAAGAGCCGACCTTCATAGACCCTGAGGCCATCAAGTACTTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR TCA 90 bp GAAGGTCGGCTCTTCCCGGTAGCCCTGCTCAAAGACCTTGCGCTTGTGCCGGAACCGGGGCCAGGTCAATaGAGCTGCGACATTTTTCAC +
Preference number: 4 (lower is better)
Translates to: EGRLFPVALLKDLALVPEPGPGQ*SCDIFH
Trigger: GTGAAAAATGTCGCAGCTTCATTGACCTGGCCCCGG...TTCCGGCACAAGCGCAAGGTCTTTGAGCAGGGCTACCGGGAAGAGCCGACCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR TCA 90 bp TCGGCTCTTCCCGGTAGCCCTGCTCAAAGACCTTGCGCTTGTGCCGGAACTCAACAACTGAGAGCACCGTaGAGACAGCCGCGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: SALPGSPAQRPCACAGTQQLRAP*RQPRRH
Trigger: ATGCCTTCGCGGCTGTCTTCACGGTGCTCTCAGTTG...TTGAGTTCCGGCACAAGCGCAAGGTCTTTGAGCAGGGCTACCGGGAAGAGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR GCA 90 bp GCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCAAAGACCTTGCGCTTGTaGCGGAACTCAATGACCGTC +
Preference number: 4 (lower is better)
Translates to: AIQWPVAMCLLASQLCPAKTLRL*RNSMTV
Trigger: GACGGTCATTGAGTTCCGGCACAAGCGCAAGGTCTT...TGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp TCAAATGTACACCCAGGCGCATCCCAGTCTGCTAAAAGCATCTCACTGCCCACTCCCTCCCTGCCACCCTaGAGTGTCTGGCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SNVHPGASQSAKSISLPTPSLPP*SVWPWP
Trigger: AGGCCAGGGCCAGACACTGCAGGGTGGCAGGGAGGG...AGTGGGCAGTGAGATGCTTTTAGCAGACTGGGATGCGCCTGGGTGTACATTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp CACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCCTGGCTCCACTaGCCTCTGATGCCTAATTTC +
Preference number: 4 (lower is better)
Translates to: HLTGLWVPAIQWPVAMCLLAWLH*PLMPNF
Trigger: GAAATTAGGCATCAGAGGGCAGTGGAGCCAGGCCAG...GAGACACATGGCCACTGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp CACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCACAAGAGCTCCTAGATaGCTGGTGGCCAGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: HLTGLWVPAIQWPVAMCLTRAPR*LVARAR
Trigger: TCTAGCCCTGGCCACCAGGCATCTAGGAGCTCTTGT...GAGACACATGGCCACTGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp GGGTTCTGGGGGCACCACTCTGGTGGTCTTGCAGCAGGGGCTGGTGCCAGCGATATGACATTGCTGGAGTaGAAGAGCTCGAGACACATG +
Preference number: 4 (lower is better)
Translates to: GFWGHHSGGLAAGAGASDMTLLE*KSSRHM
Trigger: CATGTGTCTCGAGCTCTTCCACTCCAGCAATGTCAT...ATCGCTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAGAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380897.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GCCTGCTGTGTGACACCCCTGCAGTGCCTGCGCCACTGCCCCCTCCTTCAGGAAATGACATTGCTGGAGTaGAAGAGCTCGAGACACATG +
Preference number: 4 (lower is better)
Translates to: ACCVTPLQCLRHCPLLQEMTLLE*KSSRHM
Trigger: CATGTGTCTCGAGCTCTTCCACTCCAGCAATGTCAT...TTCCTGAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCACACAGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380897.7
ENST00000447459.7
CDS-3UTR CCA 90 bp CAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGGAATCCGCCATGTGTaGCTGGTGTCGGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: QGSCDDGKSPGLLSQSHSGIRHV*LVSGRV
Trigger: TACCCTGCCCGACACCAGCCACACATGGCGGATTCC...AGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp ATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTGCATGCCAGGTTGAGGTCTTaGTCACACCCAGTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: MARVRGCCPKVTLCSPVHARLRS*SHPVPQ
Trigger: TTGGGGCACTGGGTGTGACCAAGACCTCAACCTGGC...ATGCACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCTCTGGGCACCTGACTaGCTTGTGGGTGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: GSCDDGKSPGLLSQSHSVLWAPD*LVGASH
Trigger: ATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAG...CACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp ATAGATGCCCTCTCTGGATGCTCCAGCATCCCACCTCAAGTGCCTACCACAGTGAGGGCTCTGCCCCTCTaGGCACCTGACTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: IDALSGCSSIPPQVPTTVRALPL*APDWLV
Trigger: CACAAGCCAGTCAGGTGCCCAGAGGGGCAGAGCCCT...CACTGTGGTAGGCACTTGAGGTGGGATGCTGGAGCATCCAGAGAGGGCATCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp GCTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCTACCAGATGCCGGTGTaGAAATTCCTGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ALPLWAPDWLVGASHSVAYQMPV*KFLKRK
Trigger: CTTCCTCTTCAGGAATTTCCACACCGGCATCTGGTA...GGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GCAGGACAGGCCTGGCATCTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGGCCCAAGGTCACAAGTaGAGAAGGTGGAATCTGAAC +
Preference number: 4 (lower is better)
Translates to: AGQAWHLPRRLTEFTAHRAQGHK*RRWNLN
Trigger: GTTCAGATTCCACCTTCTCCACTTGTGACCTTGGGC...CCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp TCAAATGTACACCCAGGCGCATCCCAGTCTGCTAAAAGCATCTCACTGCCCACTCCCACGCAGGCTGACTaGGTTCACGGCACACAGGCC +
Preference number: 4 (lower is better)
Translates to: SNVHPGASQSAKSISLPTPTQAD*VHGTQA
Trigger: GGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGG...AGTGGGCAGTGAGATGCTTTTAGCAGACTGGGATGCGCCTGGGTGTACATTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp CTGGTGGCCAGGGCTAGATCCCTGTCAGATCTGTCCCTGCCCAGGCCCATATATCCGGGGCCAGGTCAATaGAGCTGCGACATTTTTCAC +
Preference number: 4 (lower is better)
Translates to: LVARARSLSDLSLPRPIYPGPGQ*SCDIFH
Trigger: GTGAAAAATGTCGCAGCTTCATTGACCTGGCCCCGG...ATATATGGGCCTGGGCAGGGACAGATCTGACAGGGATCTAGCCCTGGCCACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp TCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCAGGGCTGAATGGATGTGTGGATaGCGGATAATGGATGGATGG +
Preference number: 4 (lower is better)
Translates to: SVASGHVSPGIAAVPSRAEWMCG*RIMDGW
Trigger: CCATCCATCCATTATCCGTCATCCACACATCCATTC...AGCCCTGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp ATTCCCTTGGGCCTGCCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGTCCGGATTTAATGGATaGGGAAACAGGCACAGAAAG +
Preference number: 4 (lower is better)
Translates to: IPLGLPWPHFQGHGTQAASGFNG*GNRHRK
Trigger: CTTTCTGTGCCTGTTTCCTCATCCATTAAATCCGGA...CGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp GCCCCACGCCAGGCAGAAGGACCACCCGTAGTCCCAGGAATGGGGTCTCCAGTCAGAAGGGTCCCAGGATaGAGCCAACATCTGATATTA +
Preference number: 4 (lower is better)
Translates to: APRQAEGPPVVPGMGSPVRRVPG*SQHLIL
Trigger: TAATATCAGATGTTGGCTTCATCCTGGGACCCTTCT...GACTGGAGACCCCATTCCTGGGACTACGGGTGGTCCTTCTGCCTGGCGTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR GCA 90 bp GTCGCCCTCCCTCTCTGTGCCTCGATTTGCCACCTCTCCCGGAAGTACTTGATGCGTGGTGACAGAGGCTaGCATGCAGCAGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: VALPLCASICHLSRKYLMRGDRG*HAAGKG
Trigger: TCCTTTACCTGCTGCATGGCAGCCTCTGTCACCACG...CATCAAGTACTTCCGGGAGAGGTGGCAAATCGAGGCACAGAGAGGGAGGGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR GCA 90 bp GAAGGTCGGCTCTTCCCGGTAGCCCTGCTCAAAGACCTTGCGCTTGTGCCGGAACCTGCTCAAAGACCTTaGGCTTGTGCCGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: EGRLFPVALLKDLALVPEPAQRP*ACAGTQ
Trigger: TTGAGTTCCGGCACAAGCGCAAGGTCTTTGAGCAGG...TTCCGGCACAAGCGCAAGGTCTTTGAGCAGGGCTACCGGGAAGAGCCGACCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR GCA 90 bp ATAGATGCCCTCTCTGGATGCTCCAGCATCCCACCTCAAGTGCCTACCACAGTGTCGGTTCAGCTCTGGTaGTTCCTGTGCGGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: IDALSGCSSIPPQVPTTVSVQLW*FLCGAP
Trigger: CGGAGCTCCGCACAGGAAGCACCAGAGCTGAACCGA...CACTGTGGTAGGCACTTGAGGTGGGATGCTGGAGCATCCAGAGAGGGCATCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp ATTCCCTTGGGCCTGCCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGTGTACTTTCTTTCCCTaGTATACTCTTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: IPLGLPWPHFQGHGTQAACTFFP*YTLAWL
Trigger: CAGCCAGGCAAGAGTATAGCAGGGAAAGAAAGTACA...CGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp CACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCTGTCAGATCTGTCCCTaGCCAGGCCCATATATGGCA +
Preference number: 4 (lower is better)
Translates to: HLTGLWVPAIQWPVAMCLCQICP*PGPYMA
Trigger: TGCCATATATGGGCCTGGGCAGGGACAGATCTGACA...GAGACACATGGCCACTGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp CTCAGGGTCTATGAAGGTCGGCTCTTCCCGGTAGCCCTGCTCAAAGACCTTGCGAGGCTCACGGTGACCTaGAACACCTGCGTGTACATC +
Preference number: 4 (lower is better)
Translates to: LRVYEGRLFPVALLKDLARLTVT*NTCVYI
Trigger: GATGTACACGCAGGTGTTCCAGGTCACCGTGAGCCT...CGCAAGGTCTTTGAGCAGGGCTACCGGGAAGAGCCGACCTTCATAGACCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR CCA 90 bp GGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGGCCAGGTTGAGGTCTTaGTCACACCCAGTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GSCDDGKSPGLLSQSHSVARLRS*SHPVPQ
Trigger: TTGGGGCACTGGGTGTGACCAAGACCTCAACCTGGC...CACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGGTGCCAGCCATTCAGTaGCCAGTGGCCATGTGTCTC +
Preference number: 4 (lower is better)
Translates to: GSCDDGKSPGLLSQSHSVVPAIQ*PVAMCL
Trigger: GAGACACATGGCCACTGGCCACTGAATGGCTGGCAC...CACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp ATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTGCATAGCCCACAGAGCAACTaGCCTCCATACACCGCAAGA +
Preference number: 4 (lower is better)
Translates to: MARVRGCCPKVTLCSPVHSPQSN*PPYTAR
Trigger: TCTTGCGGTGTATGGAGGCCAGTTGCTCTGTGGGCT...ATGCACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp CTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAAGGATGTGTGACACATaGAAGGAGGATGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: LCPSGHLTGLWVPAIQWPRMCDT*KEDGWK
Trigger: CTTCCATCCATCCTCCTTCCATGTGTCACACATCCT...TGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp GGACAGGCCTGGCATCTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGCCAGGATGCACAGCTGGATaGTTGAGTAATGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: GQAWHLPRRLTEFTAHRPGCTAG*LSNEDV
Trigger: CACATCCTCATTACTCAACCATCCAGCTGTGCATCC...TGGCCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp GATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTTGTGCCGGAACTCAATaGCCGTCTTGGTGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: DDGKSPGLLSQSHSVQPCCAGTQ*PSWCRS
Trigger: ACTCCTACACCAAGACGGTCATTGAGTTCCGGCACA...ACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp GGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCGTGGTGACAGAGGCTaGCATGCAGCAGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: GSCDDGKSPGLLSQSHSVRGDRG*HAAGKG
Trigger: TCCTTTACCTGCTGCATGGCAGCCTCTGTCACCACG...CACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp CTCAGGGTCTATGAAGGTCGGCTCTTCCCGGTAGCCCTGCTCAAAGACCTTGCGAAGACCTTGCGCTTGTaGCGGAACTCAATGACCGTC +
Preference number: 4 (lower is better)
Translates to: LRVYEGRLFPVALLKDLAKTLRL*RNSMTV
Trigger: GACGGTCATTGAGTTCCGGCACAAGCGCAAGGTCTT...CGCAAGGTCTTTGAGCAGGGCTACCGGGAAGAGCCGACCTTCATAGACCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR GCA 90 bp CCATATATGGCAGCCGCCCTCTCTTGCATGAGGCCAAAGCCCAAATTCCTTGTTCCACTCTGGTGGTCTTaGAGCAGGGGCTGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PYMAAALSCMRPKPKFLVPLWWS*SRGWCQ
Trigger: CTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGG...AACAAGGAATTTGGGCTTTGGCCTCATGCAAGAGAGGGCGGCTGCCATATATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp GAGGAAGGGAGAAGCATCTCCCACAACTATTCTGTGCCCATAGTTGCGGTGATCCTCTGTGCAGCCCTGTaGATTCCCTTGGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: EEGRSISHNYSVPIVAVILCAAL*IPLGLP
Trigger: GGGCAGGCCCAAGGGAATGCACAGGGCTGCACAGAG...GATCACCGCAACTATGGGCACAGAATAGTTGTGGGAGATGCTTCTCCCTTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp CCATATATGGCAGCCGCCCTCTCTTGCATGAGGCCAAAGCCCAAATTCCTTGTTCAGGAAGCCACTCTCTaGCCCCCAAAGGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PYMAAALSCMRPKPKFLVQEATL*PPKGSA
Trigger: GGCAGAGCCCTTTGGGGGGCAGAGAGTGGCTTCCTG...AACAAGGAATTTGGGCTTTGGCCTCATGCAAGAGAGGGCGGCTGCCATATATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp GTAGCCCTGCTCAAAGACCTTGCGCTTGTGCCGGAACTCAATGACCGTCTTGGTGACCCCTTTCTCCGATaGCGGGGCCAGGTCAATGAA +
Preference number: 4 (lower is better)
Translates to: VALLKDLALVPELNDRLGDPFLR*RGQVNE
Trigger: TTCATTGACCTGGCCCCGGCATCGGAGAAAGGGGTC...ACCAAGACGGTCATTGAGTTCCGGCACAAGCGCAAGGTCTTTGAGCAGGGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR GCA 90 bp AGTCGCCCTCCCTCTCTGTGCCTCGATTTGCCACCTCTCCCGGAAGTACTTGATCTCTGTGCCTCGATTTaGCACCTCTCCCGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: SRPPSLCLDLPPLPEVLDLCASI*HLSRKY
Trigger: GTACTTCCGGGAGAGGTGGCAAATCGAGGCACAGAG...ATCAAGTACTTCCGGGAGAGGTGGCAAATCGAGGCACAGAGAGGGAGGGCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR CCA 90 bp GGTGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGTACCAGATGCCGGTGTaGAAATTCCTGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GASHSVASGHVSPGIAAVYQMPV*KFLKRK
Trigger: CTTCCTCTTCAGGAATTTCCACACCGGCATCTGGTA...CACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CCA 90 bp GCCTGCTGTGTGACACCCCTGCAGTGCCTGCGCCACTGCCCCCTCCTTCAGGAAAGGAATAAGGCCTCTTaGGAAATGACTGAACTTGGA +
Preference number: 4 (lower is better)
Translates to: ACCVTPLQCLRHCPLLQERNKAS*EMTELG
Trigger: TCCAAGTTCAGTCATTTCCCAAGAGGCCTTATTCCT...TTCCTGAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCACACAGCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp CTCAGGGTCTATGAAGGTCGGCTCTTCCCGGTAGCCCTGCTCAAAGACCTTGCGCATTCCCAGGAGGCCTaGAGAGAGACTGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LRVYEGRLFPVALLKDLAHSQEA*RETVGR
Trigger: TCTTCCTACAGTCTCTCTCCAGGCCTCCTGGGAATG...CGCAAGGTCTTTGAGCAGGGCTACCGGGAAGAGCCGACCTTCATAGACCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR TCA 90 bp CCGGTAGCCCTGCTCAAAGACCTTGCGCTTGTGCCGGAACTCAATGACCGTCTTTGTGCCGGAACTCAATaGCCGTCTTGGTGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: PVALLKDLALVPELNDRLCAGTQ*PSWCRS
Trigger: ACTCCTACACCAAGACGGTCATTGAGTTCCGGCACA...AAGACGGTCATTGAGTTCCGGCACAAGCGCAAGGTCTTTGAGCAGGGCTACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR TCA 90 bp AAAGACCTTGCGCTTGTGCCGGAACTCAATGACCGTCTTGGTGTAGGAGTTGAGTGGCCTCAGGGTCTATaGAGGTCGGCTCTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: KDLALVPELNDRLGVGVEWPQGL*RSALPG
Trigger: ACCGGGAAGAGCCGACCTTCATAGACCCTGAGGCCA...CTCAACTCCTACACCAAGACGGTCATTGAGTTCCGGCACAAGCGCAAGGTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR TCA 90 bp TGTCAGATCTGTCCCTGCCCAGGCCCATATATGGCAGCCGCCCTCTCTTGCATGCAATGCGTGAATGAATaGGCACAAACCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CQICPCPGPYMAAALSCMQCVNE*AQTSSW
Trigger: CCAGCTGGAGGTTTGTGCTCATTCATTCACGCATTG...CATGCAAGAGAGGGCGGCTGCCATATATGGGCCTGGGCAGGGACAGATCTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp GTAGCCCTGCTCAAAGACCTTGCGCTTGTGCCGGAACTCAATGACCGTCTTGGTGTGACCTGGAACACCTaGGTGTACATCATGTGGGCG +
Preference number: 4 (lower is better)
Translates to: VALLKDLALVPELNDRLGVTWNT*VYIMWA
Trigger: CGCCCACATGATGTACACGCAGGTGTTCCAGGTCAC...ACCAAGACGGTCATTGAGTTCCGGCACAAGCGCAAGGTCTTTGAGCAGGGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR GCA 90 bp GGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCCTGCTCAAAGACCTTaGGCTTGTGCCGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: GSCDDGKSPGLLSQSHSVPAQRP*ACAGTQ
Trigger: TTGAGTTCCGGCACAAGCGCAAGGTCTTTGAGCAGG...CACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp AGCCACAGCCCACAGAGCAACTGGCCTCCATACACCGCAAGAAAACAAGTTCAAGCATTCCCTTGGGCCTaGCCTGGCCCCATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SHSPQSNWPPYTARKQVQAFPWA*PGPISK
Trigger: CTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAATGC...TTGAACTTGTTTTCTTGCGGTGTATGGAGGCCAGTTGCTCTGTGGGCTGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp CAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTCCCAAAGTCACTCTGTaGAGCCCTGTGCATTCCCTT +
Preference number: 4 (lower is better)
Translates to: QGSCDDGKSPGLLSQSHSPKVTL*SPVHSL
Trigger: AAGGGAATGCACAGGGCTGCACAGAGTGACTTTGGG...AGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR GCA 90 bp GCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCACCTGCTCTCCACACCTaGCATTGGGACTATTTTAAA +
Preference number: 4 (lower is better)
Translates to: AIQWPVAMCLLASQLCPAPALHT*HWDYFK
Trigger: TTTAAAATAGTCCCAATGGCAGGTGTGGAGAGCAGG...TGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp GCCCACAGAGCAACTGGCCTCCATACACCGCAAGAAAACAAGTTCAACAAGCATTGGCCTCAGGGTCTATaGAGGTCGGCTCTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: AHRATGLHTPQENKFNKHWPQGL*RSALPG
Trigger: ACCGGGAAGAGCCGACCTTCATAGACCCTGAGGCCA...ATGCTTGTTGAACTTGTTTTCTTGCGGTGTATGGAGGCCAGTTGCTCTGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp CTCAGGGTCTATGAAGGTCGGCTCTTCCCGGTAGCCCTGCTCAAAGACCTTGCGATGACATTGCTGGAGTaGAAGAGCTCGAGACACATG +
Preference number: 4 (lower is better)
Translates to: LRVYEGRLFPVALLKDLAMTLLE*KSSRHM
Trigger: CATGTGTCTCGAGCTCTTCCACTCCAGCAATGTCAT...CGCAAGGTCTTTGAGCAGGGCTACCGGGAAGAGCCGACCTTCATAGACCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR CCA 90 bp AAGCCTCCTCAGGGTCAGGGTGGTGTGATGTTGCTGAGCTCTGAAGAGAAATGTGCCAGGTTGAGGTCTTaGTCACACCCAGTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: KPPQGQGGVMLLSSEEKCARLRS*SHPVPQ
Trigger: TTGGGGCACTGGGTGTGACCAAGACCTCAACCTGGC...ACATTTCTCTTCAGAGCTCAGCAACATCACACCACCCTGACCCTGAGGAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp GAGGAAGGGAGAAGCATCTCCCACAACTATTCTGTGCCCATAGTTGCGGTGATCGTGCCAGCCATTCAGTaGCCAGTGGCCATGTGTCTC +
Preference number: 4 (lower is better)
Translates to: EEGRSISHNYSVPIVAVIVPAIQ*PVAMCL
Trigger: GAGACACATGGCCACTGGCCACTGAATGGCTGGCAC...GATCACCGCAACTATGGGCACAGAATAGTTGTGGGAGATGCTTCTCCCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp CCATATATGGCAGCCGCCCTCTCTTGCATGAGGCCAAAGCCCAAATTCCTTGTTCACCTGACTGGCTTGTaGGTGCCAGCCATTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PYMAAALSCMRPKPKFLVHLTGL*VPAIQW
Trigger: CCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTG...AACAAGGAATTTGGGCTTTGGCCTCATGCAAGAGAGGGCGGCTGCCATATATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp CCGGAAGTACTTGATGGCCTCAGGGTCTATGAAGGTCGGCTCTTCCCGGTAGCCTACCAGATGCCGGTGTaGAAATTCCTGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PEVLDGLRVYEGRLFPVAYQMPV*KFLKRK
Trigger: CTTCCTCTTCAGGAATTTCCACACCGGCATCTGGTA...GGCTACCGGGAAGAGCCGACCTTCATAGACCCTGAGGCCATCAAGTACTTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR CCA 90 bp GCCCACAGAGCAACTGGCCTCCATACACCGCAAGAAAACAAGTTCAACAAGCATGCCCAGGCCCATATATaGCAGCCGCCCTCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: AHRATGLHTPQENKFNKHAQAHI*QPPSLA
Trigger: TGCAAGAGAGGGCGGCTGCCATATATGGGCCTGGGC...ATGCTTGTTGAACTTGTTTTCTTGCGGTGTATGGAGGCCAGTTGCTCTGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp CAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTATACTCTTGCCTGGCTaGTGCCCAGACAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: QGSCDDGKSPGLLSQSHSILLPG*CPDNLH
Trigger: ATGAAGATTGTCTGGGCATCAGCCAGGCAAGAGTAT...AGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp GCCCACAGAGCAACTGGCCTCCATACACCGCAAGAAAACAAGTTCAACAAGCATCCCTATCCCCCAAGCTaGCCCTGTAACCTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: AHRATGLHTPQENKFNKHPYPPS*PCNLRV
Trigger: GACTCTCAGGTTACAGGGTCAGCTTGGGGGATAGGG...ATGCTTGTTGAACTTGTTTTCTTGCGGTGTATGGAGGCCAGTTGCTCTGTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp CCATATATGGCAGCCGCCCTCTCTTGCATGAGGCCAAAGCCCAAATTCCTTGTTTGTCCCCTGAGCCCCTaGGACTCAAGACATCTGAAC +
Preference number: 4 (lower is better)
Translates to: PYMAAALSCMRPKPKFLVCPLSP*DSRHLN
Trigger: GTTCAGATGTCTTGAGTCTCAGGGGCTCAGGGGACA...AACAAGGAATTTGGGCTTTGGCCTCATGCAAGAGAGGGCGGCTGCCATATATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp TCACAAGTGGAGAAGGTGGAATCTGAACCCAGGCTCACGACAATAGATGCCCTCCTTCTTCACCCTCCCTaGTTAGGGCTTGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: SQVEKVESEPRLTTIDALLLHPP*LGLGFG
Trigger: CCCAAACCCAAGCCCTAAGCAGGGAGGGTGAAGAAG...GAGGGCATCTATTGTCGTGAGCCTGGGTTCAGATTCCACCTTCTCCACTTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp ATTCCCTTGGGCCTGCCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATAATAGATGATGAATaGGTGGATAATAGATGGACG +
Preference number: 4 (lower is better)
Translates to: IPLGLPWPHFQGHGTQAAIIDDE*VDNRWT
Trigger: CGTCCATCTATTATCCACCCATTCATCATCTATTAT...CGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp GCCTGCTGTGTGACACCCCTGCAGTGCCTGCGCCACTGCCCCCTCCTTCAGGAAACAATCTTCATGTCTTaGCTTAGACATCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: ACCVTPLQCLRHCPLLQETIFMS*LRHHFL
Trigger: GAGAAAATGATGTCTAAGCCAAGACATGAAGATTGT...TTCCTGAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCACACAGCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp ATAGATGCCCTCTCTGGATGCTCCAGCATCCCACCTCAAGTGCCTACCACAGTGTGGATAATGGCTGGATaGGTGATGGATGATGGATGG +
Preference number: 4 (lower is better)
Translates to: IDALSGCSSIPPQVPTTVWIMAG*VMDDGW
Trigger: CCATCCATCATCCATCACTCATCCAGCCATTATCCA...CACTGTGGTAGGCACTTGAGGTGGGATGCTGGAGCATCCAGAGAGGGCATCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp AGGGTAAAGCCTCCTCAGGGTCAGGGTGGTGTGATGTTGCTGAGCTCTGAAGAGAGTAATGAGGATGTGTaGCACATGGAAGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: RVKPPQGQGGVMLLSSEESNEDV*HMEGGW
Trigger: CCATCCTCCTTCCATGTGTCACACATCCTCATTACT...CTCTTCAGAGCTCAGCAACATCACACCACCCTGACCCTGAGGAGGCTTTACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp CACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCATAGTAGGGGCACAGTaGACTATATCAGTGAATAGA +
Preference number: 4 (lower is better)
Translates to: HLTGLWVPAIQWPVAMCLIVGAQ*TISVNR
Trigger: TCTATTCACTGATATAGTTCACTGTGCCCCTACTAT...GAGACACATGGCCACTGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp TCAAATGTACACCCAGGCGCATCCCAGTCTGCTAAAAGCATCTCACTGCCCACTCAGAAGGACCCTGGGTaGGAACAAGAGCTCCTAGAT +
Preference number: 4 (lower is better)
Translates to: SNVHPGASQSAKSISLPTQKDPG*EQELLD
Trigger: ATCTAGGAGCTCTTGTTCTCACCCAGGGTCCTTCTG...AGTGGGCAGTGAGATGCTTTTAGCAGACTGGGATGCGCCTGGGTGTACATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp AAGCCTCCTCAGGGTCAGGGTGGTGTGATGTTGCTGAGCTCTGAAGAGAAATGTCTAATTTCCCACAACTaGCTCCTGACCTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: KPPQGQGGVMLLSSEEKCLISHN*LLTSLL
Trigger: GAGCAGGGAGGTCAGGAGGCAGTTGTGGGAAATTAG...ACATTTCTCTTCAGAGCTCAGCAACATCACACCACCCTGACCCTGAGGAGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp CCTAATTTTCCTCCTCTTTATAATAAGAATCTGTTTCTCCAGGCATCTAAGCCCGGCTGGTGCCAGCGATaGCCTGAGGTCCGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: PNFPPLYNKNLFLQASKPGWCQR*PEVRGP
Trigger: TGGCCCGCGGACCTCAGGCCATCGCTGGCACCAGCC...GGGCTTAGATGCCTGGAGAAACAGATTCTTATTATAAAGAGGAGGAAAATTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp GAGGAAGGGAGAAGCATCTCCCACAACTATTCTGTGCCCATAGTTGCGGTGATCCTCTTGGGAAATGACTaGACTTGGAGTCAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: EEGRSISHNYSVPIVAVILLGND*TWSQES
Trigger: GGACTCCTGACTCCAAGTTCAGTCATTTCCCAAGAG...GATCACCGCAACTATGGGCACAGAATAGTTGTGGGAGATGCTTCTCCCTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp AGCCACAGCCCACAGAGCAACTGGCCTCCATACACCGCAAGAAAACAAGTTCAAGAGACTCAAGACATCTaGACCACGAAGTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: SHSPQSNWPPYTARKQVQETQDI*TTKSPS
Trigger: AGACGGAGACTTCGTGGTTCAGATGTCTTGAGTCTC...TTGAACTTGTTTTCTTGCGGTGTATGGAGGCCAGTTGCTCTGTGGGCTGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp CCTAATTTTCCTCCTCTTTATAATAAGAATCTGTTTCTCCAGGCATCTAAGCCCCACCCCTGCAGTGCCTaGGCCACTGCCCCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PNFPPLYNKNLFLQASKPHPCSA*ATAPSF
Trigger: GAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTG...GGGCTTAGATGCCTGGAGAAACAGATTCTTATTATAAAGAGGAGGAAAATTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp CCATATATGGCAGCCGCCCTCTCTTGCATGAGGCCAAAGCCCAAATTCCTTGTTACTTCAGAAGGACCCTaGGTGAGAACAAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PYMAAALSCMRPKPKFLVTSEGP*VRTRAP
Trigger: AGGAGCTCTTGTTCTCACCCAGGGTCCTTCTGAAGT...AACAAGGAATTTGGGCTTTGGCCTCATGCAAGAGAGGGCGGCTGCCATATATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp GCCCACAGAGCAACTGGCCTCCATACACCGCAAGAAAACAAGTTCAACAAGCATCACAAGTGGAGAAGGTaGAATCTGAACCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: AHRATGLHTPQENKFNKHHKWRR*NLNPGS
Trigger: TGAGCCTGGGTTCAGATTCCACCTTCTCCACTTGTG...ATGCTTGTTGAACTTGTTTTCTTGCGGTGTATGGAGGCCAGTTGCTCTGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp CAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGGGATGAATGAAAAATaGATGAATGGACAATGGACA +
Preference number: 4 (lower is better)
Translates to: QGSCDDGKSPGLLSQSHSGMNEK*MNGQWT
Trigger: TGTCCATTGTCCATTCATCCATTTTTCATTCATCCC...AGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp GAGGAAGGGAGAAGCATCTCCCACAACTATTCTGTGCCCATAGTTGCGGTGATCCTCCACACCTGCCATTaGGACTATTTTAAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: EEGRSISHNYSVPIVAVILHTCH*DYFKVL
Trigger: GAGGACTTTAAAATAGTCCCAATGGCAGGTGTGGAG...GATCACCGCAACTATGGGCACAGAATAGTTGTGGGAGATGCTTCTCCCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp GCCCACAGAGCAACTGGCCTCCATACACCGCAAGAAAACAAGTTCAACAAGCATCTATTCCCTCCTAATTaGTTCCTGAATCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: AHRATGLHTPQENKFNKHLFPPN*FLNLPA
Trigger: TGCGGGCAGATTCAGGAACCAATTAGGAGGGAATAG...ATGCTTGTTGAACTTGTTTTCTTGCGGTGTATGGAGGCCAGTTGCTCTGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp ATATATGGCAGCCGCCCTCTCTTGCATGAGGCCAAAGCCCAAATTCCTTGTTCTTTCTGTGCCCATAGTTaGGGTGATCTTCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: IYGSRPLLHEAKAQIPCSFCAHS*GDLPQM
Trigger: CATTTGAGGAAGATCACCGCAACTATGGGCACAGAA...AGAACAAGGAATTTGGGCTTTGGCCTCATGCAAGAGAGGGCGGCTGCCATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp CAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTTTGATGGACTATAGATaGATAATAGATGATGAGTGG +
Preference number: 4 (lower is better)
Translates to: QGSCDDGKSPGLLSQSHSLMDYR*IIDDEW
Trigger: CCACTCATCATCTATTATCCATCTATAGTCCATCAA...AGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp CCTAATTTTCCTCCTCTTTATAATAAGAATCTGTTTCTCCAGGCATCTAAGCCCGCCTGGCCCCTGCCTTaGCCACTCTCTGGAATACAA +
Preference number: 4 (lower is better)
Translates to: PNFPPLYNKNLFLQASKPAWPLP*PLSGIQ
Trigger: TTGTATTCCAGAGAGTGGGCAAGGCAGGGGCCAGGC...GGGCTTAGATGCCTGGAGAAACAGATTCTTATTATAAAGAGGAGGAAAATTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp CCATATATGGCAGCCGCCCTCTCTTGCATGAGGCCAAAGCCCAAATTCCTTGTTATGATGAAGGATGGATaGTTGATGGACTATAGATGG +
Preference number: 4 (lower is better)
Translates to: PYMAAALSCMRPKPKFLVMMKDG*LMDYRW
Trigger: CCATCTATAGTCCATCAACCATCCATCCTTCATCAT...AACAAGGAATTTGGGCTTTGGCCTCATGCAAGAGAGGGCGGCTGCCATATATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp AAGCCTCCTCAGGGTCAGGGTGGTGTGATGTTGCTGAGCTCTGAAGAGAAATGTATATCAGTGAATAGATaGATGCACAGCTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: KPPQGQGGVMLLSSEEKCISVNR*MHSWMV
Trigger: AACCATCCAGCTGTGCATCCATCTATTCACTGATAT...ACATTTCTCTTCAGAGCTCAGCAACATCACACCACCCTGACCCTGAGGAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp CCTAATTTTCCTCCTCTTTATAATAAGAATCTGTTTCTCCAGGCATCTAAGCCCCTCCTAGATGCCTGGTaGCCAGGGCTAGATCCCTGT +
Preference number: 4 (lower is better)
Translates to: PNFPPLYNKNLFLQASKPLLDAW*PGLDPC
Trigger: ACAGGGATCTAGCCCTGGCCACCAGGCATCTAGGAG...GGGCTTAGATGCCTGGAGAAACAGATTCTTATTATAAAGAGGAGGAAAATTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp CCTAATTTTCCTCCTCTTTATAATAAGAATCTGTTTCTCCAGGCATCTAAGCCCAGGCTCACGGTGACCTaGAACACCTGCGTGTACATC +
Preference number: 4 (lower is better)
Translates to: PNFPPLYNKNLFLQASKPRLTVT*NTCVYI
Trigger: GATGTACACGCAGGTGTTCCAGGTCACCGTGAGCCT...GGGCTTAGATGCCTGGAGAAACAGATTCTTATTATAAAGAGGAGGAAAATTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CCA 90 bp TTTTACTTAAATGCCTATTTTGGTTTCATCCTAAGCAGTAACGTCTGTGAAGTCTGGCCATGTGTCTCCTaGCATCGCAGCTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: FYLNAYFGFILSSNVCEVWPCVS*HRSCAQ
Trigger: CTGGGCACAGCTGCGATGCCAGGAGACACATGGCCA...GACTTCACAGACGTTACTGCTTAGGATGAAACCAAAATAGGCATTTAAGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp CCTAATTTTCCTCCTCTTTATAATAAGAATCTGTTTCTCCAGGCATCTAAGCCCTGTGCCGGAACTCAATaGCCGTCTTGGTGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: PNFPPLYNKNLFLQASKPCAGTQ*PSWCRS
Trigger: ACTCCTACACCAAGACGGTCATTGAGTTCCGGCACA...GGGCTTAGATGCCTGGAGAAACAGATTCTTATTATAAAGAGGAGGAAAATTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp TTTTACTTAAATGCCTATTTTGGTTTCATCCTAAGCAGTAACGTCTGTGAAGTCCGGTGTGGAAATTCCTaGAGAGGAAGCGGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: FYLNAYFGFILSSNVCEVRCGNS*RGSGRR
Trigger: GCGACGACCGCTTCCTCTTCAGGAATTTCCACACCG...GACTTCACAGACGTTACTGCTTAGGATGAAACCAAAATAGGCATTTAAGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp TTTTACTTAAATGCCTATTTTGGTTTCATCCTAAGCAGTAACGTCTGTGAAGTCGACCCCTTTCTCCGATaGCGGGGCCAGGTCAATGAA +
Preference number: 4 (lower is better)
Translates to: FYLNAYFGFILSSNVCEVDPFLR*RGQVNE
Trigger: TTCATTGACCTGGCCCCGGCATCGGAGAAAGGGGTC...GACTTCACAGACGTTACTGCTTAGGATGAAACCAAAATAGGCATTTAAGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR GCA 90 bp CCTAATTTTCCTCCTCTTTATAATAAGAATCTGTTTCTCCAGGCATCTAAGCCCGCTCACGACAATAGATaGCCTCTCTGGATGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PNFPPLYNKNLFLQASKPAHDNR*PLWMLQ
Trigger: CTGGAGCATCCAGAGAGGGCATCTATTGTCGTGAGC...GGGCTTAGATGCCTGGAGAAACAGATTCTTATTATAAAGAGGAGGAAAATTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp TTTTACTTAAATGCCTATTTTGGTTTCATCCTAAGCAGTAACGTCTGTGAAGTCGCTGACCCTGTAACCTaGGAGTCGTCACCAACTTTC +
Preference number: 4 (lower is better)
Translates to: FYLNAYFGFILSSNVCEVADPVT*ESSPTF
Trigger: GAAAGTTGGTGACGACTCTCAGGTTACAGGGTCAGC...GACTTCACAGACGTTACTGCTTAGGATGAAACCAAAATAGGCATTTAAGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp TTTTACTTAAATGCCTATTTTGGTTTCATCCTAAGCAGTAACGTCTGTGAAGTCAGGCCTCTTGGGAAATaGCTGAACTTGGAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: FYLNAYFGFILSSNVCEVRPLGK*LNLESG
Trigger: TCCTGACTCCAAGTTCAGTCATTTCCCAAGAGGCCT...GACTTCACAGACGTTACTGCTTAGGATGAAACCAAAATAGGCATTTAAGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR TCA 90 bp TTTTACTTAAATGCCTATTTTGGTTTCATCCTAAGCAGTAACGTCTGTGAAGTCAGTGAACTATATCAGTaGATAGATGGATGCACAGCT +
Preference number: 4 (lower is better)
Translates to: FYLNAYFGFILSSNVCEVSELYQ*IDGCTA
Trigger: AGCTGTGCATCCATCTATTCACTGATATAGTTCACT...GACTTCACAGACGTTACTGCTTAGGATGAAACCAAAATAGGCATTTAAGTAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS CCA 90 bp CGGCGGTGCCGTTGGCCGTGGCGTTGGCGCCCGAGTTGGGGCAGTTaGCGCGCCCGCCCTGGCCGCAGCCCGGCTTGGGGACCCGCTGCG +
Preference number: 5 (lower is better)
Translates to: RRCRWPWRWRPSWGS*RARPGRSPAWGPAA
Trigger: CGCAGCGGGTCCCCAAGCCGGGCTGCGGCCAGGGCGGGCGCGCCAACTGCCCCAACTCGGGCGCCAACGCCACGGCCAACGGCACCGCCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS CCA 90 bp GCCGTGGCGTTGGCGCCCGAGTTGGGGCAGTTGGCGCGCCCGCCCTaGCCGCAGCCCGGCTTGGGGACCCGCTGCGTGCCCTGGCACCAG +
Preference number: 5 (lower is better)
Translates to: AVALAPELGQLARPP*PQPGLGTRCVPWHQ
Trigger: CTGGTGCCAGGGCACGCAGCGGGTCCCCAAGCCGGGCTGCGGCCAGGGCGGGCGCGCCAACTGCCCCAACTCGGGCGCCAACGCCACGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS GCA 90 bp CAGTTGGCGCGCCCGCCCTGGCCGCAGCCCGGCTTGGGGACCCGCTaGGTGCCCTGGCACCAGTGCGTGGTGAGGAAAGCGGTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: QLARPPWPQPGLGTR*VPWHQCVVRKAVVA
Trigger: CGCCACCACCGCTTTCCTCACCACGCACTGGTGCCAGGGCACGCAGCGGGTCCCCAAGCCGGGCTGCGGCCAGGGCGGGCGCGCCAACTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS CCA 90 bp CGCCCGCCCTGGCCGCAGCCCGGCTTGGGGACCCGCTGCGTGCCCTaGCACCAGTGCGTGGTGAGGAAAGCGGTGGTGGCGAACAGCAGC +
Preference number: 5 (lower is better)
Translates to: RPPWPQPGLGTRCVP*HQCVVRKAVVANSS
Trigger: GCTGCTGTTCGCCACCACCGCTTTCCTCACCACGCACTGGTGCCAGGGCACGCAGCGGGTCCCCAAGCCGGGCTGCGGCCAGGGCGGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS GCA 90 bp TGGCCGCAGCCCGGCTTGGGGACCCGCTGCGTGCCCTGGCACCAGTaGGTGGTGAGGAAAGCGGTGGTGGCGAACAGCAGCGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: WPQPGLGTRCVPWHQ*VVRKAVVANSSASR
Trigger: CCTGCTGGCGCTGCTGTTCGCCACCACCGCTTTCCTCACCACGCACTGGTGCCAGGGCACGCAGCGGGTCCCCAAGCCGGGCTGCGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CAA 90 bp GGGTTCTGGGGGCACCACTCTGGTGGTCTTGCAGCAGGGGCTGGTGCCAGCGATGCGTTGGCGCCCGAGTaGGGGCAGTTGGCGCGCCCG +
Preference number: 5 (lower is better)
Translates to: GFWGHHSGGLAAGAGASDALAPE*GQLARP
Trigger: CGGGCGCGCCAACTGCCCCAACTCGGGCGCCAACGC...ATCGCTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAGAACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CAA 90 bp GCTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCGCGTTGGCGCCCGAGTaGGGGCAGTTGGCGCGCCCG +
Preference number: 5 (lower is better)
Translates to: ALPLWAPDWLVGASHSVAALAPE*GQLARP
Trigger: CGGGCGCGCCAACTGCCCCAACTCGGGCGCCAACGC...GGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS TCA 90 bp AGCCCGGCTTGGGGACCCGCTGCGTGCCCTGGCACCAGTGCGTGGTaGGGAAAGCGGTGGTGGCGAACAGCAGCGCCAGCAGGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: SPAWGPAACPGTSAW*GKRWWRTAAPAGSG
Trigger: CCCTGAACCTGCTGGCGCTGCTGTTCGCCACCACCGCTTTCCTCACCACGCACTGGTGCCAGGGCACGCAGCGGGTCCCCAAGCCGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CAA 90 bp GCAGGACAGGCCTGGCATCTCCCACGCAGGCTGACTGAGTTCACGGCACACAGGGCTCCGCGCGCGAAGTaGGCAGCTGGCGCCCCGCGT +
Preference number: 5 (lower is better)
Translates to: AGQAWHLPRRLTEFTAHRAPRAK*AAGAPR
Trigger: ACGCGGGGCGCCAGCTGCCAACTTCGCGCGCGGAGC...CCTGTGTGCCGTGAACTCAGTCAGCCTGCGTGGGAGATGCCAGGCCTGTCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS TCA 90 bp ACCACTCTGGTGGTCTTGCAGCAGGGGCTGGTGCCAGCGATGGCCTaGGGTCCGCGGGCCAGGTTGAGGTCTTGGTCACACCCAGTGCCC +
Preference number: 5 (lower is better)
Translates to: TTLVVLQQGLVPAMA*GPRARLRSWSHPVP
Trigger: GGGCACTGGGTGTGACCAAGACCTCAACCTGGCCCGCGGACCTCAGGCCATCGCTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CAA 90 bp CCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGCGATGGGCAGGACAGGCACCACTCTGGTGGTCTaGCAGCAGGGGCTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: PWPHFQGHGTQAAMGRTGTTLVV*QQGLVP
Trigger: TGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGT...GCCTGTCCTGCCCATCGCTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CAA 90 bp TCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCAGGGCTGGTTTCCAGCCCCTGTaGGTGCTGGCAGGGACTGCC +
Preference number: 5 (lower is better)
Translates to: SVASGHVSPGIAAVPSRAGFQPL*VLAGTA
Trigger: GGCAGTCCCTGCCAGCACCAACAGGGGCTGGAAACC...AGCCCTGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380897.7
CDS-3UTR CAA 90 bp GCCTGCTGTGTGACACCCCTGCAGTGCCTGCGCCACTGCCCCCTCCTTCAGGAAGGCCAGGTTGAGGTCTaGGTCACACCCAGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: ACCVTPLQCLRHCPLLQEGQVEV*VTPSAP
Trigger: TGGGGCACTGGGTGTGACCAAGACCTCAACCTGGCC...TTCCTGAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCACACAGCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CAA 90 bp GCCTGCTGTGTGACACCCCTGCAGTGCCTGCGCCACTGCCCCCTCCTTCAGGAAACCACTCTGGTGGTCTaGCAGCAGGGGCTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: ACCVTPLQCLRHCPLLQETTLVV*QQGLVP
Trigger: TGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGT...TTCCTGAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCACACAGCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CAA 90 bp GGGTTCTGGGGGCACCACTCTGGTGGTCTTGCAGCAGGGGCTGGTGCCAGCGATACAGCCGCGAAGGCATaGAGCTTGAGCCCGTCGATG +
Preference number: 5 (lower is better)
Translates to: GFWGHHSGGLAAGAGASDTAAKA*SLSPSM
Trigger: CATCGACGGGCTCAAGCTCAATGCCTTCGCGGCTGT...ATCGCTGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGTGCCCCCAGAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380897.7
ENST00000447459.7
CDS-3UTR CAA 90 bp CTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAGGGCACCTGACTGGCTaGTGGGTGCCAGCCATTCAG +
Preference number: 5 (lower is better)
Translates to: LCPSGHLTGLWVPAIQWPGHLTG*WVPAIQ
Trigger: CTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCC...TGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS CCA 90 bp CCAAGCCCGCTGAGCTCCTCCTCGCACGAGTACCAGATGCCGGTGTaGAAATTCCTGAAGAGGAAGCGGTCGTCGCCGGTCTCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: PSPLSSSSHEYQMPV*KFLKRKRSSPVSQL
Trigger: CAGCTGGGAGACCGGCGACGACCGCTTCCTCTTCAGGAATTTCCACACCGGCATCTGGTACTCGTGCGAGGAGGAGCTCAGCGGGCTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395724.7
ENST00000447459.7
ENST00000562611.1
CDS-3UTR CAA 90 bp GCTCTGCCCCTCTGGGCACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCCCCTGCTCAAAGACCTaGCGCTTGTGCCGGAACTCA +
Preference number: 5 (lower is better)
Translates to: ALPLWAPDWLVGASHSVAPCSKT*RLCRNS
Trigger: TGAGTTCCGGCACAAGCGCAAGGTCTTTGAGCAGGG...GGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCCAGAGGGGCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CAA 90 bp GATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGCAGCCCTGTGCCCTGTGCATTCCCTaGGGCCTGCCCTGGCCCCAT +
Preference number: 5 (lower is better)
Translates to: DDGKSPGLLSQSHSVQPCALCIP*GLPWPH
Trigger: ATGGGGCCAGGGCAGGCCCAAGGGAATGCACAGGGC...ACAGGGCTGCACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CAA 90 bp GGTGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGGGGCACCTGACTGGCTaGTGGGTGCCAGCCATTCAG +
Preference number: 5 (lower is better)
Translates to: GASHSVASGHVSPGIAAVGHLTG*WVPAIQ
Trigger: CTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCC...CACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CAA 90 bp AGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCGGGCACCTGACTGGCTaGTGGGTGCCAGCCATTCAG +
Preference number: 5 (lower is better)
Translates to: SHSVASGHVSPGIAAVPSGHLTG*WVPAIQ
Trigger: CTGAATGGCTGGCACCCACAAGCCAGTCAGGTGCCC...GCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CAA 90 bp GCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCCCCTGCTCAAAGACCTaGCGCTTGTGCCGGAACTCA +
Preference number: 5 (lower is better)
Translates to: ASHSVASGHVSPGIAAVPPCSKT*RLCRNS
Trigger: TGAGTTCCGGCACAAGCGCAAGGTCTTTGAGCAGGG...GGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCTGGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CAA 90 bp CAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGCCCTGTGCATTCCCTaGGGCCTGCCCTGGCCCCAT +
Preference number: 5 (lower is better)
Translates to: QGSCDDGKSPGLLSQSHSALCIP*GLPWPH
Trigger: ATGGGGCCAGGGCAGGCCCAAGGGAATGCACAGGGC...AGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CAA 90 bp CCATATATGGCAGCCGCCCTCTCTTGCATGAGGCCAAAGCCCAAATTCCTTGTTGCTCCGCGCGCGAAGTaGGCAGCTGGCGCCCCGCGT +
Preference number: 5 (lower is better)
Translates to: PYMAAALSCMRPKPKFLVAPRAK*AAGAPR
Trigger: ACGCGGGGCGCCAGCTGCCAACTTCGCGCGCGGAGC...AACAAGGAATTTGGGCTTTGGCCTCATGCAAGAGAGGGCGGCTGCCATATATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CAA 90 bp GCCTGCTGTGTGACACCCCTGCAGTGCCTGCGCCACTGCCCCCTCCTTCAGGAATGCCTACCACAGTGCTaGGCACATAGTAGGGGCACA +
Preference number: 5 (lower is better)
Translates to: ACCVTPLQCLRHCPLLQECLPQC*AHSRGT
Trigger: TGTGCCCCTACTATGTGCCAAGCACTGTGGTAGGCA...TTCCTGAAGGAGGGGGCAGTGGCGCAGGCACTGCAGGGGTGTCACACAGCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CAA 90 bp AGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCAGCCCGTCGATGACATaGCTGGAGTGGAAGAGCTCG +
Preference number: 5 (lower is better)
Translates to: SHSVASGHVSPGIAAVPSSPSMT*LEWKSS
Trigger: CGAGCTCTTCCACTCCAGCAATGTCATCGACGGGCT...GCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380897.7
ENST00000447459.7
CDS-3UTR CAA 90 bp TCCCTGCTTAGGGCTTGGGTTTGGGGGCCCACTTCTTGCTCGCCCCACATCTCTACAGCCGCGAAGGCATaGAGCTTGAGCCCGTCGATG +
Preference number: 5 (lower is better)
Translates to: SLLRAWVWGPTSCSPHISTAAKA*SLSPSM
Trigger: CATCGACGGGCTCAAGCTCAATGCCTTCGCGGCTGT...AGAGATGTGGGGCGAGCAAGAAGTGGGCCCCCAAACCCAAGCCCTAAGCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CAA 90 bp GCATTCCCTTGGGCCTGCCCTGGCCCCATTTCCAAGGCCATGGGACCCAGGCAGTCAAAGACCTTGCGCTaGTGCCGGAACTCAATGACC +
Preference number: 5 (lower is better)
Translates to: AFPWACPGPISKAMGPRQSKTLR*CRNSMT
Trigger: GGTCATTGAGTTCCGGCACAAGCGCAAGGTCTTTGA...CTGCCTGGGTCCCATGGCCTTGGAAATGGGGCCAGGGCAGGCCCAAGGGAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CAA 90 bp CATCGCAGCTGTGCCCAGCAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCCCTGCTCAAAGACCTaGCGCTTGTGCCGGAACTCA +
Preference number: 5 (lower is better)
Translates to: HRSCAQQGSCDDGKSPGLPCSKT*RLCRNS
Trigger: TGAGTTCCGGCACAAGCGCAAGGTCTTTGAGCAGGG...CAGCCCCGGACTCTTGCCATCATCACATGAGCCCTGCTGGGCACAGCTGCGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS TCA 90 bp GAGTGGCCAGGGAGGCTGAGGGAAAACCAGCGTGGAGTCTTCAACTaGGAGCACCGTGAAGACAGCCGCGAAGGCATTGAGCTTGAGCCC +
Preference number: 5 (lower is better)
Translates to: EWPGRLRENQRGVFN*EHREDSREGIELEP
Trigger: GGGCTCAAGCTCAATGCCTTCGCGGCTGTCTTCACGGTGCTCTCAGTTGAAGACTCCACGCTGGTTTTCCCTCAGCCTCCCTGGCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR CAA 90 bp AGCCATTCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCGCGAAGGCATTGAGCTaGAGCCCGTCGATGACATTG +
Preference number: 5 (lower is better)
Translates to: SHSVASGHVSPGIAAVPSAKALS*SPSMTL
Trigger: CAATGTCATCGACGGGCTCAAGCTCAATGCCTTCGC...GCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGAATGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380897.7
ENST00000447459.7
CDS-3UTR CAA 90 bp CCGGAAGTACTTGATGGCCTCAGGGTCTATGAAGGTCGGCTCTTCCCGGTAGCCACAGCCGCGAAGGCATaGAGCTTGAGCCCGTCGATG +
Preference number: 5 (lower is better)
Translates to: PEVLDGLRVYEGRLFPVATAAKA*SLSPSM
Trigger: CATCGACGGGCTCAAGCTCAATGCCTTCGCGGCTGT...GGCTACCGGGAAGAGCCGACCTTCATAGACCCTGAGGCCATCAAGTACTTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR CAA 90 bp CAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGGCCAGGTTGAGGTCTaGGTCACACCCAGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: QGSCDDGKSPGLLSQSHSGQVEV*VTPSAP
Trigger: TGGGGCACTGGGTGTGACCAAGACCTCAACCTGGCC...AGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS CCA 90 bp GCCGCGAAGGCATTGAGCTTGAGCCCGTCGATGACATTGCTGGAGTaGAAGAGCTCGAGACACATGAGGCTGAAGCCAACCACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: AAKALSLSPSMTLLE*KSSRHMRLKPTTSS
Trigger: GCTGCTGGTGGTTGGCTTCAGCCTCATGTGTCTCGAGCTCTTCCACTCCAGCAATGTCATCGACGGGCTCAAGCTCAATGCCTTCGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000447459.7
ENST00000562611.1
CDS-3UTR CAA 90 bp GTACTTGATGGCCTCAGGGTCTATGAAGGTCGGCTCTTCCCGGTAGCCCTGCTCAGCCCGTCGATGACATaGCTGGAGTGGAAGAGCTCG +
Preference number: 5 (lower is better)
Translates to: VLDGLRVYEGRLFPVALLSPSMT*LEWKSS
Trigger: CGAGCTCTTCCACTCCAGCAATGTCATCGACGGGCT...GAGCAGGGCTACCGGGAAGAGCCGACCTTCATAGACCCTGAGGCCATCAAGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR CAA 90 bp TCGGCTCTTCCCGGTAGCCCTGCTCAAAGACCTTGCGCTTGTGCCGGAACTCAACCCTGCTCAAAGACCTaGCGCTTGTGCCGGAACTCA +
Preference number: 5 (lower is better)
Translates to: SALPGSPAQRPCACAGTQPCSKT*RLCRNS
Trigger: TGAGTTCCGGCACAAGCGCAAGGTCTTTGAGCAGGG...TTGAGTTCCGGCACAAGCGCAAGGTCTTTGAGCAGGGCTACCGGGAAGAGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR CAA 90 bp TCAGTGGCCAGTGGCCATGTGTCTCCTGGCATCGCAGCTGTGCCCAGCAGGGCTCAGGGTGGTGTGATGTaGCTGAGCTCTGAAGAGAAA +
Preference number: 5 (lower is better)
Translates to: SVASGHVSPGIAAVPSRAQGGVM*LSSEEK
Trigger: TTTCTCTTCAGAGCTCAGCAACATCACACCACCCTG...AGCCCTGCTGGGCACAGCTGCGATGCCAGGAGACACATGGCCACTGGCCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CAA 90 bp CAGGGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTAGCCCGTCGATGACATaGCTGGAGTGGAAGAGCTCG +
Preference number: 5 (lower is better)
Translates to: QGSCDDGKSPGLLSQSHSSPSMT*LEWKSS
Trigger: CGAGCTCTTCCACTCCAGCAATGTCATCGACGGGCT...AGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380897.7
ENST00000447459.7
CDS-3UTR CAA 90 bp CACCTGACTGGCTTGTGGGTGCCAGCCATTCAGTGGCCAGTGGCCATGTGTCTCTCAAAGACCTTGCGCTaGTGCCGGAACTCAATGACC +
Preference number: 5 (lower is better)
Translates to: HLTGLWVPAIQWPVAMCLSKTLR*CRNSMT
Trigger: GGTCATTGAGTTCCGGCACAAGCGCAAGGTCTTTGA...GAGACACATGGCCACTGGCCACTGAATGGCTGGCACCCACAAGCCAGTCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CAA 90 bp GTACTTGATGGCCTCAGGGTCTATGAAGGTCGGCTCTTCCCGGTAGCCCTGCTCTCAAAGACCTTGCGCTaGTGCCGGAACTCAATGACC +
Preference number: 5 (lower is better)
Translates to: VLDGLRVYEGRLFPVALLSKTLR*CRNSMT
Trigger: GGTCATTGAGTTCCGGCACAAGCGCAAGGTCTTTGA...GAGCAGGGCTACCGGGAAGAGCCGACCTTCATAGACCCTGAGGCCATCAAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR CAA 90 bp TCAAATGTACACCCAGGCGCATCCCAGTCTGCTAAAAGCATCTCACTGCCCACTGGCCAGGTTGAGGTCTaGGTCACACCCAGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: SNVHPGASQSAKSISLPTGQVEV*VTPSAP
Trigger: TGGGGCACTGGGTGTGACCAAGACCTCAACCTGGCC...AGTGGGCAGTGAGATGCTTTTAGCAGACTGGGATGCGCCTGGGTGTACATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CAA 90 bp CCATATATGGCAGCCGCCCTCTCTTGCATGAGGCCAAAGCCCAAATTCCTTGTTACCACTCTGGTGGTCTaGCAGCAGGGGCTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: PYMAAALSCMRPKPKFLVTTLVV*QQGLVP
Trigger: TGGCACCAGCCCCTGCTGCAAGACCACCAGAGTGGT...AACAAGGAATTTGGGCTTTGGCCTCATGCAAGAGAGGGCGGCTGCCATATATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS-3UTR CAA 90 bp GGCTCATGTGATGATGGCAAGAGTCCGGGGCTGCTGTCCCAAAGTCACTCTGTGTCAAAGACCTTGCGCTaGTGCCGGAACTCAATGACC +
Preference number: 5 (lower is better)
Translates to: GSCDDGKSPGLLSQSHSVSKTLR*CRNSMT
Trigger: GGTCATTGAGTTCCGGCACAAGCGCAAGGTCTTTGA...CACAGAGTGACTTTGGGACAGCAGCCCCGGACTCTTGCCATCATCACATGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS-3UTR CAA 90 bp AAGCCTCCTCAGGGTCAGGGTGGTGTGATGTTGCTGAGCTCTGAAGAGAAATGTTGCCTGGCCCCTGCCTaGCCCACTCTCTGGAATACA +
Preference number: 5 (lower is better)
Translates to: KPPQGQGGVMLLSSEEKCCLAPA*PTLWNT
Trigger: TGTATTCCAGAGAGTGGGCAAGGCAGGGGCCAGGCA...ACATTTCTCTTCAGAGCTCAGCAACATCACACCACCCTGACCCTGAGGAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS TCA 90 bp CAACATCTGATATTAAGCAGAGCAGGAGGGACCAGCAAAGAAAGCTaGGGCAGAGTGGCCAGGGAGGCTGAGGGAAAACCAGCGTGGAGT +
Preference number: 5 (lower is better)
Translates to: QHLILSRAGGTSKES*GRVAREAEGKPAWS
Trigger: ACTCCACGCTGGTTTTCCCTCAGCCTCCCTGGCCACTCTGCCTCAGCTTTCTTTGCTGGTCCCTCCTGCTCTGCTTAATATCAGATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS-3UTR CAA 90 bp ATAGATGCCCTCTCTGGATGCTCCAGCATCCCACCTCAAGTGCCTACCACAGTGGTTAGCTCATTTAATTaGCACAACAGCTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: IDALSGCSSIPPQVPTTVVSSFN*HNSLKR
Trigger: CCTCTTCAAGCTGTTGTGCAAATTAAATGAGCTAAC...CACTGTGGTAGGCACTTGAGGTGGGATGCTGGAGCATCCAGAGAGGGCATCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447459.7
CDS CAA 90 bp GCGGCGGTGCCGTTGGCCGTGGCGTTGGCGCCCGAGTTGGGGCAGTaGGCGCGCCCGCCCTGGCCGCAGCCCGGCTTGGGGACCCGCTGC +
Preference number: 6 (lower is better)
Translates to: AAVPLAVALAPELGQ*ARPPWPQPGLGTRC
Trigger: GCAGCGGGTCCCCAAGCCGGGCTGCGGCCAGGGCGGGCGCGCCAACTGCCCCAACTCGGGCGCCAACGCCACGGCCAACGGCACCGCCGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS CCA 72 bp GGCAGTTGGCGCGCCCGCCCTGGCCGCAGCCCGGCTTaGGGACCCGCTGCGTGCCCTGGCACCAGTGCGTGG +
Preference number: 6 (lower is better)
Translates to: GSWRARPGRSPA*GPAACPGTSAW
Trigger: CCACGCACTGGTGCCAGGGCACGCAGCGGGTCCCCAAGCCGGGCTGCGGCCAGGGCGGGCGCGCCAACTGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS CCA 72 bp TTGGCGCCCGAGTTGGGGCAGTTGGCGCGCCCGCCCTaGCCGCAGCCCGGCTTGGGGACCCGCTGCGTGCCC +
Preference number: 6 (lower is better)
Translates to: LAPELGQLARPP*PQPGLGTRCVP
Trigger: GGGCACGCAGCGGGTCCCCAAGCCGGGCTGCGGCCAGGGCGGGCGCGCCAACTGCCCCAACTCGGGCGCCAA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS CAA 72 bp CCGTTGGCCGTGGCGTTGGCGCCCGAGTTGGGGCAGTaGGCGCGCCCGCCCTGGCCGCAGCCCGGCTTGGGG +
Preference number: 6 (lower is better)
Translates to: PLAVALAPELGQ*ARPPWPQPGLG
Trigger: CCCCAAGCCGGGCTGCGGCCAGGGCGGGCGCGCCAACTGCCCCAACTCGGGCGCCAACGCCACGGCCAACGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS CCA 72 bp CGTTGGCCGTGGCGTTGGCGCCCGAGTTGGGGCAGTTaGCGCGCCCGCCCTGGCCGCAGCCCGGCTTGGGGA +
Preference number: 6 (lower is better)
Translates to: RWPWRWRPSWGS*RARPGRSPAWG
Trigger: TCCCCAAGCCGGGCTGCGGCCAGGGCGGGCGCGCCAACTGCCCCAACTCGGGCGCCAACGCCACGGCCAACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS GCA 72 bp CGCCCGCCCTGGCCGCAGCCCGGCTTGGGGACCCGCTaGGTGCCCTGGCACCAGTGCGTGGTGAGGAAAGCG +
Preference number: 6 (lower is better)
Translates to: RPPWPQPGLGTR*VPWHQCVVRKA
Trigger: CGCTTTCCTCACCACGCACTGGTGCCAGGGCACGCAGCGGGTCCCCAAGCCGGGCTGCGGCCAGGGCGGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS CCA 72 bp TGGCCGCAGCCCGGCTTGGGGACCCGCTGCGTGCCCTaGCACCAGTGCGTGGTGAGGAAAGCGGTGGTGGCG +
Preference number: 6 (lower is better)
Translates to: WPQPGLGTRCVP*HQCVVRKAVVA
Trigger: CGCCACCACCGCTTTCCTCACCACGCACTGGTGCCAGGGCACGCAGCGGGTCCCCAAGCCGGGCTGCGGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS GCA 72 bp CCCGGCTTGGGGACCCGCTGCGTGCCCTGGCACCAGTaGGTGGTGAGGAAAGCGGTGGTGGCGAACAGCAGC +
Preference number: 6 (lower is better)
Translates to: PGLGTRCVPWHQ*VVRKAVVANSS
Trigger: GCTGCTGTTCGCCACCACCGCTTTCCTCACCACGCACTGGTGCCAGGGCACGCAGCGGGTCCCCAAGCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395724.7
ENST00000447459.7
CDS TCA 72 bp TGGTGCCAGCGATGGCCTGAGGTCCGCGGGCCAGGTTaGGGTCTTGGTCACACCCAGTGCCCCAAGACCCAG +
Preference number: 6 (lower is better)
Translates to: WCQRWPEVRGPG*GLGHTQCPKTQ
Trigger: CTGGGTCTTGGGGCACTGGGTGTGACCAAGACCTCAACCTGGCCCGCGGACCTCAGGCCATCGCTGGCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS TCA 72 bp GTGGTCTTGCAGCAGGGGCTGGTGCCAGCGATGGCCTaGGGTCCGCGGGCCAGGTTGAGGTCTTGGTCACAC +
Preference number: 6 (lower is better)
Translates to: VVLQQGLVPAMA*GPRARLRSWSH
Trigger: GTGTGACCAAGACCTCAACCTGGCCCGCGGACCTCAGGCCATCGCTGGCACCAGCCCCTGCTGCAAGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
CDS GCA 72 bp GTGCCCCAAGACCCAGCACTGTCGGTTCAGCTCTGGTaGTTCCTGTGCGGAGCTCCGGGGCCAGGAATCCGC +
Preference number: 6 (lower is better)
Translates to: VPQDPALSVQLW*FLCGAPGPGIR
Trigger: GCGGATTCCTGGCCCCGGAGCTCCGCACAGGAAGCACCAGAGCTGAACCGACAGTGCTGGGTCTTGGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
ENST00000569166.1
CDS CCA 72 bp CCAGTGCCCCAAGACCCAGCACTGTCGGTTCAGCTCTaGTGCTTCCTGTGCGGAGCTCCGGGGCCAGGAATC +
Preference number: 6 (lower is better)
Translates to: PVPQDPALSVQL*CFLCGAPGPGI
Trigger: GATTCCTGGCCCCGGAGCTCCGCACAGGAAGCACCAGAGCTGAACCGACAGTGCTGGGTCTTGGGGCACTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380897.7
ENST00000395724.7
ENST00000447459.7
ENST00000569166.1
CDS GCA 72 bp CTGGGGCAAGTCGCCCTCCCTCTCTGTGCCTCGATTTaGCACCTCTCCCGGAAGTACTTGATGGCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: LGQVALPLCASI*HLSRKYLMASG
Trigger: CCCTGAGGCCATCAAGTACTTCCGGGAGAGGTGGCAAATCGAGGCACAGAGAGGGAGGGCGACTTGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569166.1
CDS CCA 72 bp TGCTCCTATCGCTGGGTTTCCAGCCCCTGTTGGTGCTaGCAGGGACTGCCCCTCATCATGGCGCTGCTCACT +
Preference number: 6 (lower is better)
Translates to: CSYRWVSSPCWC*QGLPLIMALLT
Trigger: AGTGAGCAGCGCCATGATGAGGGGCAGTCCCTGCCAGCACCAACAGGGGCTGGAAACCCAGCGATAGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380897.7
CDS TCA 72 bp CCTCGCACGAGTACCAGATGCCGGTGTGGAAATTCCTaGAGAGGAAGCGGTCGTCGCCGGTCTCCCAGCTGT +
Preference number: 6 (lower is better)
Translates to: PRTSTRCRCGNS*RGSGRRRSPSC
Trigger: ACAGCTGGGAGACCGGCGACGACCGCTTCCTCTTCAGGAATTTCCACACCGGCATCTGGTACTCGTGCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395724.7
ENST00000447459.7
ENST00000562611.1
CDS CCA 72 bp CTGAGCTCCTCCTCGCACGAGTACCAGATGCCGGTGTaGAAATTCCTGAAGAGGAAGCGGTCGTCGCCGGTC +
Preference number: 6 (lower is better)
Translates to: LSSSSHEYQMPV*KFLKRKRSSPV
Trigger: GACCGGCGACGACCGCTTCCTCTTCAGGAATTTCCACACCGGCATCTGGTACTCGTGCGAGGAGGAGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395724.7
ENST00000447459.7
ENST00000562611.1
CDS CAA 72 bp AGGCCTGAGAGCACCGTGAAGACAGCCGCGAAGGCATaGAGCTTGAGCCCGTCGATGACATTGCTGGAGTGG +
Preference number: 6 (lower is better)
Translates to: RPESTVKTAAKA*SLSPSMTLLEW
Trigger: CCACTCCAGCAATGTCATCGACGGGCTCAAGCTCAATGCCTTCGCGGCTGTCTTCACGGTGCTCTCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000447459.7
ENST00000569166.1
CDS CAA 90 bp AGGAGGCCTGAGAGCACCGTGAAGACAGCCGCGAAGGCATTGAGCTaGAGCCCGTCGATGACATTGCTGGAGTGGAAGAGCTCGAGACAC +
Preference number: 6 (lower is better)
Translates to: RRPESTVKTAAKALS*SPSMTLLEWKSSRH
Trigger: GTGTCTCGAGCTCTTCCACTCCAGCAATGTCATCGACGGGCTCAAGCTCAATGCCTTCGCGGCTGTCTTCACGGTGCTCTCAGGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000447459.7
ENST00000569166.1
CDS CAA 90 bp ATTCCCAGGAGGCCTGAGAGCACCGTGAAGACAGCCGCGAAGGCATaGAGCTTGAGCCCGTCGATGACATTGCTGGAGTGGAAGAGCTCG +
Preference number: 6 (lower is better)
Translates to: IPRRPESTVKTAAKA*SLSPSMTLLEWKSS
Trigger: CGAGCTCTTCCACTCCAGCAATGTCATCGACGGGCTCAAGCTCAATGCCTTCGCGGCTGTCTTCACGGTGCTCTCAGGCCTCCTGGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000447459.7
ENST00000569166.1
CDS TCA 72 bp GGGAGGCTGAGGGAAAACCAGCGTGGAGTCTTCAACTaGGAGCACCGTGAAGACAGCCGCGAAGGCATTGAG +
Preference number: 6 (lower is better)
Translates to: GRLRENQRGVFN*EHREDSREGIE
Trigger: CTCAATGCCTTCGCGGCTGTCTTCACGGTGCTCTCAGTTGAAGACTCCACGCTGGTTTTCCCTCAGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS CAA 72 bp GCCGCGAAGGCATTGAGCTTGAGCCCGTCGATGACATaGCTGGAGTGGAAGAGCTCGAGACACATGAGGCTG +
Preference number: 6 (lower is better)
Translates to: AAKALSLSPSMT*LEWKSSRHMRL
Trigger: CAGCCTCATGTGTCTCGAGCTCTTCCACTCCAGCAATGTCATCGACGGGCTCAAGCTCAATGCCTTCGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000447459.7
ENST00000562611.1
CDS CAA 72 bp GAGAGCACCGTGAAGACAGCCGCGAAGGCATTGAGCTaGAGCCCGTCGATGACATTGCTGGAGTGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: ESTVKTAAKALS*SPSMTLLEWKS
Trigger: GCTCTTCCACTCCAGCAATGTCATCGACGGGCTCAAGCTCAATGCCTTCGCGGCTGTCTTCACGGTGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380897.7
ENST00000447459.7
ENST00000562611.1
ENST00000569166.1
CDS CAA 90 bp GTGAAGACAGCCGCGAAGGCATTGAGCTTGAGCCCGTCGATGACATaGCTGGAGTGGAAGAGCTCGAGACACATGAGGCTGAAGCCAACC +
Preference number: 6 (lower is better)
Translates to: VKTAAKALSLSPSMT*LEWKSSRHMRLKPT
Trigger: GGTTGGCTTCAGCCTCATGTGTCTCGAGCTCTTCCACTCCAGCAATGTCATCGACGGGCTCAAGCTCAATGCCTTCGCGGCTGTCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000447459.7
ENST00000562611.1
CDS CAA 90 bp GTGGAGTCTTCAACTGAGAGCACCGTGAAGACAGCCGCGAAGGCATaGAGCTTGAGCCCGTCGATGACATTGCTGGAGTGGAAGAGCTCG +
Preference number: 6 (lower is better)
Translates to: VESSTESTVKTAAKA*SLSPSMTLLEWKSS
Trigger: CGAGCTCTTCCACTCCAGCAATGTCATCGACGGGCTCAAGCTCAATGCCTTCGCGGCTGTCTTCACGGTGCTCTCAGTTGAAGACTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS CAA 72 bp TCAACTGAGAGCACCGTGAAGACAGCCGCGAAGGCATaGAGCTTGAGCCCGTCGATGACATTGCTGGAGTGG +
Preference number: 6 (lower is better)
Translates to: STESTVKTAAKA*SLSPSMTLLEW
Trigger: CCACTCCAGCAATGTCATCGACGGGCTCAAGCTCAATGCCTTCGCGGCTGTCTTCACGGTGCTCTCAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS CAA 90 bp TCTTCAACTGAGAGCACCGTGAAGACAGCCGCGAAGGCATTGAGCTaGAGCCCGTCGATGACATTGCTGGAGTGGAAGAGCTCGAGACAC +
Preference number: 6 (lower is better)
Translates to: SSTESTVKTAAKALS*SPSMTLLEWKSSRH
Trigger: GTGTCTCGAGCTCTTCCACTCCAGCAATGTCATCGACGGGCTCAAGCTCAATGCCTTCGCGGCTGTCTTCACGGTGCTCTCAGTTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562611.1
CDS CCA 72 bp GCATTGAGCTTGAGCCCGTCGATGACATTGCTGGAGTaGAAGAGCTCGAGACACATGAGGCTGAAGCCAACC +
Preference number: 6 (lower is better)
Translates to: ALSLSPSMTLLE*KSSRHMRLKPT
Trigger: GGTTGGCTTCAGCCTCATGTGTCTCGAGCTCTTCCACTCCAGCAATGTCATCGACGGGCTCAAGCTCAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380897.7
ENST00000447459.7
ENST00000562611.1