RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GSE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000131149

Ensembl transcript IDs: ENST00000253458.12, ENST00000393243.5, ENST00000405402.6, ENST00000411612.5, ENST00000412692.5, ENST00000438180.1, ENST00000469381.1, ENST00000471070.1, ENST00000479488.1, ENST00000495192.1, ENST00000496345.1, ENST00000562659.1, ENST00000568080.1, ENST00000574293.1, ENST00000635906.1, ENST00000637419.1

Found 1450 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGACGTACAAAGCAAACTGTGCGGGGGCAGATAAAGCGACACGATaGCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAGGGCTAGGGCCA +
Preference number: 1 (lower is better)
Translates to: QTYKANCAGADKATR*QLPASCSAQQGLGP
Trigger: TGGCCCTAGCCCTTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCCCGCACAGTTTGCTTTGTACGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR CCA 90 bp GGGGAGAAGCCAACTATTGCTAGCACAGTGACACTGCTCCCACCCTaGGCAGACCTCTCATGGTGTGCCACCTGTCCCCTGTGCTGTCAT +
Preference number: 1 (lower is better)
Translates to: GEKPTIASTVTLLPP*ADLSWCATCPLCCH
Trigger: ATGACAGCACAGGGGACAGGTGGCACACCATGAGAGGTCTGCCCAGGGTGGGAGCAGTGTCACTGTGCTAGCAATAGTTGGCTTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR CCA 90 bp CCCCTAGGCCAGTGCATTGCAGGCAAGGCAAGGCACTTTCGTAAGTaGTCCAGTTCTGCCTGGAGCCGCTCCCTTTCTGAGACCATCTTC +
Preference number: 1 (lower is better)
Translates to: PLGQCIAGKARHFRK*SSSAWSRSLSETIF
Trigger: GAAGATGGTCTCAGAAAGGGAGCGGCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCTTGCCTTGCCTGCAATGCACTGGCCTAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
3UTR CCA 90 bp TGCAGAGGGACAGATGGCAGCTCCCTTCCAGGTAATGTAGGAAGATaGTCTAAGGACCGAGCCGAGGGCTTTCAGGTGCATCCTGACACA +
Preference number: 1 (lower is better)
Translates to: CRGTDGSSLPGNVGR*SKDRAEGFQVHPDT
Trigger: TGTGTCAGGATGCACCTGAAAGCCCTCGGCTCGGTCCTTAGACCATCTTCCTACATTACCTGGAAGGGAGCTGCCATCTGTCCCTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR CCA 90 bp ATTGCTAGCACAGTGACACTGCTCCCACCCTGGGCAGACCTCTCATaGTGTGCCACCTGTCCCCTGTGCTGTCATAGAAAATCCAACCAA +
Preference number: 1 (lower is better)
Translates to: IASTVTLLPPWADLS*CATCPLCCHRKSNQ
Trigger: TTGGTTGGATTTTCTATGACAGCACAGGGGACAGGTGGCACACCATGAGAGGTCTGCCCAGGGTGGGAGCAGTGTCACTGTGCTAGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR CCA 90 bp CTAAGGACCGAGCCGAGGGCTTTCAGGTGCATCCTGACACACAGGTaGCATAATCGACTCCAGAGCAGATTTGAGGTACTCAGTGTGAAG +
Preference number: 1 (lower is better)
Translates to: LRTEPRAFRCILTHR*HNRLQSRFEVLSVK
Trigger: CTTCACACTGAGTACCTCAAATCTGCTCTGGAGTCGATTATGCCACCTGTGTGTCAGGATGCACCTGAAAGCCCTCGGCTCGGTCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR TCA 90 bp AGGAATGAGACTGGCCCCATCGCTGCGGCAAAAGCAAACTGGGCTTaGGGCATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTT +
Preference number: 1 (lower is better)
Translates to: RNETGPIAAAKANWA*GIVTWQHKKEQNRF
Trigger: AAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTATGCCTCAAGCCCAGTTTGCTTTTGCCGCAGCGATGGGGCCAGTCTCATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR TCA 90 bp GTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGGTGTaGAGCTGTGTATACACAGAGCTCTGTACATGCTCCCCACGGAGT +
Preference number: 1 (lower is better)
Translates to: VCMKTQPTVVTIWWV*SCVYTELCTCSPRS
Trigger: ACTCCGTGGGGAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR TCA 90 bp CCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTaGAACATGTGGCTCAGGGAAAGGGGTAGGATCTGGTGTGAAATT +
Preference number: 1 (lower is better)
Translates to: PSPSCGGSLAFSTLV*NMWLRERGRIWCEI
Trigger: AATTTCACACCAGATCCTACCCCTTTCCCTGAGCCACATGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR CCA 90 bp CTGCTGATAATACTGGCGGTACATTCGTCTGAGTTTGCTAATAACTaGAAGATTCTTGGCAGACGTACAAAGCAAACTGTGCGGGGGCAG +
Preference number: 1 (lower is better)
Translates to: LLIILAVHSSEFANN*KILGRRTKQTVRGQ
Trigger: CTGCCCCCGCACAGTTTGCTTTGTACGTCTGCCAAGAATCTTCCAGTTATTAGCAAACTCAGACGAATGTACCGCCAGTATTATCAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR GCA 90 bp GTTTCAGTGAGGAACCAGATAATTTACTATTGGAAGGTATCCCTCTaGAGAGGGACAGATGGCAGCTCCCTTCCAGGTAATGTAGGAAGA +
Preference number: 1 (lower is better)
Translates to: VSVRNQIIYYWKVSL*RGTDGSSLPGNVGR
Trigger: TCTTCCTACATTACCTGGAAGGGAGCTGCCATCTGTCCCTCTGCAGAGGGATACCTTCCAATAGTAAATTATCTGGTTCCTCACTGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR TCA 90 bp TTCCCTGTGTTAGAATCCTTCACTGCTGAAGGTGTGGGCTCCTTTTaGTGCTCTCTGAATACTCTTAAGGGTGCAACCTATCAGAATGTT +
Preference number: 1 (lower is better)
Translates to: FPVLESFTAEGVGSF*CSLNTLKGATYQNV
Trigger: AACATTCTGATAGGTTGCACCCTTAAGAGTATTCAGAGAGCATCAAAAGGAGCCCACACCTTCAGCAGTGAAGGATTCTAACACAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR TCA 90 bp TACCTTTTTCTTAGTTTATTCGTGTTGCCTTACTGGTTTGTATTCTaGTTGTCGTATTACTTCTTGAGCAAGAGTAGAGTACTCAGATCG +
Preference number: 1 (lower is better)
Translates to: YLFLSLFVLPYWFVF*LSYYFLSKSRVLRS
Trigger: CGATCTGAGTACTCTACTCTTGCTCAAGAAGTAATACGACAATCAGAATACAAACCAGTAAGGCAACACGAATAAACTAAGAAAAAGGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAACTCCTGGGGAGGAATaGGACTGGCCCCATCGCTGC +
Preference number: 2 (lower is better)
Translates to: GADKATRCQLPASCSAQQTPGEE*DWPHRC
Trigger: GCAGCGATGGGGCCAGTCTCATTCCTCCCCAGGAGT...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAATGCTGGTCACAGCAGTaGGCAGCCGGCACACAGGTC +
Preference number: 2 (lower is better)
Translates to: GADKATRCQLPASCSAQQCWSQQ*AAGTQV
Trigger: GACCTGTGTGCCGGCTGCTCACTGCTGTGACCAGCA...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGGTGATTCAATTGCATTaGCGTCAAGGTGAGTTCATT +
Preference number: 2 (lower is better)
Translates to: AARARAKGSAAGHSSEQPVIQLH*RQGEFI
Trigger: AATGAACTCACCTTGACGTCAATGCAATTGAATCAC...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCCCCGTTGCTTTGCCTTaGTGTGATGAGCCCAGTTTC +
Preference number: 2 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAPVALP*CDEPSF
Trigger: GAAACTGGGCTCATCACACCAAGGCAAAGCAACGGG...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR GCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAGACTGGCCCCATCGCTaGGGCAAAAGCAAACTGGGC +
Preference number: 2 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRDWPHR*GKSKLG
Trigger: GCCCAGTTTGCTTTTGCCGCAGCGATGGGGCCAGTC...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCCATGACTGTCACACATaGGTTCTACAGACTACCCCC +
Preference number: 2 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAHDCHT*VLQTTP
Trigger: GGGGGTAGTCTGTAGAACCCATGTGTGACAGTCATG...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAACTCCTGGGGAGGAATaGGACTGGCCCCATCGCTGC +
Preference number: 2 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETTPGEE*DWPHRC
Trigger: GCAGCGATGGGGCCAGTCTCATTCCTCCCCAGGAGT...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAACTCCTGGGGAGGAATaGGACTGGCCCCATCGCTGC +
Preference number: 2 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLTPGEE*DWPHRC
Trigger: GCAGCGATGGGGCCAGTCTCATTCCTCCCCAGGAGT...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR GCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAACGACACGATGCCAGCTaGCAGCAAGCTGTTCTGCGC +
Preference number: 2 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCERHDAS*QQAVLR
Trigger: GCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCG...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGCTATTGCTAGCACAGTaGCACTGCTCCCACCCTGGG +
Preference number: 2 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQLLLAQ*HCSHPG
Trigger: CCCAGGGTGGGAGCAGTGTCACTGTGCTAGCAATAG...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR GCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAGACTGGCCCCATCGCTaGGGCAAAAGCAAACTGGGC +
Preference number: 2 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETDWPHR*GKSKLG
Trigger: GCCCAGTTTGCTTTTGCCGCAGCGATGGGGCCAGTC...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR GCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAACCGAGGGCTTTCAGGTaGATCCTGACACACAGGTGG +
Preference number: 2 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCEPRAFR*ILTHRW
Trigger: CCACCTGTGTGTCAGGATGCACCTGAAAGCCCTCGG...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR CAA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTaGTGTGAAACATGTGGCTCAGGGAAAGGGGTAGGATCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: ADHLHLVVDPWHFLH*CETCGSGKGVGSGV
Trigger: CACACCAGATCCTACCCCTTTCCCTGAGCCACATGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAAACAATCTGGTGGGTGTaGAGCTGTGTATACACAGAG +
Preference number: 2 (lower is better)
Translates to: EEVSSSAWLSTAASGATQTIWWV*SCVYTE
Trigger: CTCTGTGTATACACAGCTTCACACCCACCAGATTGT...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR GCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACTCGCCCGTTGCTTTaGCTTGGTGTGATGAGCCCA +
Preference number: 2 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCETRPLL*LGVMSP
Trigger: TGGGCTCATCACACCAAGGCAAAGCAACGGGCGAGT...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAAGCAAGTTTCACTCCTaGGGAGGAATGAGACTGGCC +
Preference number: 2 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRSKFHS*GGMRLA
Trigger: GGCCAGTCTCATTCCTCCCCAGGAGTGAAACTTGCT...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACATCTGGTGAGGGCCCTTaGGAGCAAGAGAGGCCTTCT +
Preference number: 2 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETSGEGP*EQERPS
Trigger: AGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGA...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGCCCGTTGCTTTGCCTTaGTGTGATGAGCCCAGTTTC +
Preference number: 2 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQPVALP*CDEPSF
Trigger: GAAACTGGGCTCATCACACCAAGGCAAAGCAACGGG...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATCCCCAGACCAGTGACTaGCAGCCCTGGCCTCTGGTG +
Preference number: 2 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNPQTSD*QPWPLV
Trigger: CACCAGAGGCCAGGGCTGCCAGTCACTGGTCTGGGG...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGCAAGGGAGTGCCCCTTaGATGGTAAGGGATGAGCTA +
Preference number: 2 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQQGSAP*MVRDEL
Trigger: TAGCTCATCCCTTACCATCCAAGGGGCACTCCCTTG...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAGATGAGCCCAGTTTCTaGCCGTTCCTGTGCTTGTCA +
Preference number: 2 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETDEPSF*PFLCLS
Trigger: TGACAAGCACAGGAACGGTCAGAAACTGGGCTCATC...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR GCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCGACTGGCCCCATCGCTaGGGCAAAAGCAAACTGGGC +
Preference number: 2 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFDWPHR*GKSKLG
Trigger: GCCCAGTTTGCTTTTGCCGCAGCGATGGGGCCAGTC...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR CCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCAGCAAGTTTCACTCCTaGGGAGGAATGAGACTGGCC +
Preference number: 2 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLSKFHS*GGMRLA
Trigger: GGCCAGTCTCATTCCTCCCCAGGAGTGAAACTTGCT...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR CCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACATGGGGAAACCATGACTaGGTACTGTGTCTTGGGTGG +
Preference number: 2 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETWGNHD*VLCLGW
Trigger: CCACCCAAGACACAGTACCCAGTCATGGTTTCCCCA...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGAGAACAGAACCGGTTTaGTCCACTCATATGCACAGG +
Preference number: 2 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQRTEPV*STHMHR
Trigger: CCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCT...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGAAAGCAAACTGGGCTTaGGGCATAGTAACATGGCAA +
Preference number: 2 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEKANWA*GIVTWQ
Trigger: TTGCCATGTTACTATGCCTCAAGCCCAGTTTGCTTT...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR TCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACAAAGCAAACTGGGCTTaGGGCATAGTAACATGGCAA +
Preference number: 2 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNKANWA*GIVTWQ
Trigger: TTGCCATGTTACTATGCCTCAAGCCCAGTTTGCTTT...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCCCCAACCTTTTCAGCTaGAGCAAGTTTCACTCCTGG +
Preference number: 2 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLPNLFS*SKFHSW
Trigger: CCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGG...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR TCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAGAGCCGCTCCCTTTCTaGGACCATCTTCTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSEPLPF*DHLLFL
Trigger: CAGAAACAGAAGATGGTCTCAGAAAGGGAGCGGCTC...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438180.1
3UTR-3UTR GCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGGAGCCTGGAATCCTTTaGTTCATGCATGGCACATTC +
Preference number: 2 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQEPGIL*FMHGTF
Trigger: GAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTC...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR GCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACACAGAGCTCTGTACATaGTCCCCACGGAGTAATAAA +
Preference number: 2 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNTELCT*SPRSNK
Trigger: TTTATTACTCCGTGGGGAGCATGTACAGAGCTCTGT...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTAGGCACTTTCGTAAGTaGTCCAGTTCTGCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLRHFRK*SSSAWS
Trigger: GCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCT...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
3UTR-3UTR CCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTAGGGAAACCGTCACCTaGGATATCCCTTCAGGTAGC +
Preference number: 2 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIRETVT*DIPSGS
Trigger: GCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCT...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438180.1
3UTR-3UTR TCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAAGAACAGAACCGGTTTaGTCCACTCATATGCACAGG +
Preference number: 2 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLRTEPV*STHMHR
Trigger: CCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCT...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR TCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGATACACAGTACAAGGCTaGAGCACCTTTGACTTTTCT +
Preference number: 2 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRYTVQG*STFDFS
Trigger: AGAAAAGTCAAAGGTGCTTCAGCCTTGTACTGTGTA...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR GCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAAGAATCCTTTGCTTCATaGATGGCACATTCTCATTTT +
Preference number: 2 (lower is better)
Translates to: EEVSSSAWLSTAASGATQESFAS*MAHSHF
Trigger: AAAATGAGAATGTGCCATGCATGAAGCAAAGGATTC...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR GCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAGAGCTCTGTACATaGTCCCCACGGAGTAATAAA +
Preference number: 2 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCETELCT*SPRSNK
Trigger: TTTATTACTCCGTGGGGAGCATGTACAGAGCTCTGT...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR GCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATCCGAGGGCTTTCAGGTaGATCCTGACACACAGGTGG +
Preference number: 2 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNPRAFR*ILTHRW
Trigger: CCACCTGTGTGTCAGGATGCACCTGAAAGCCCTCGG...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAACATTGGTTGCTCGCTaGATGACAACGGTGATTCAA +
Preference number: 2 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETTLVAR*MTTVIQ
Trigger: TTGAATCACCGTTGTCATTCAGCGAGCAACCAATGT...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR GCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATTGGAAGGTATCCCTCTaGAGAGGGACAGATGGCAGC +
Preference number: 2 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNWKVSL*RGTDGS
Trigger: GCTGCCATCTGTCCCTCTGCAGAGGGATACCTTCCA...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAGTGATTCAATTGCATTaGCGTCAAGGTGAGTTCATT +
Preference number: 2 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCEVIQLH*RQGEFI
Trigger: AATGAACTCACCTTGACGTCAATGCAATTGAATCAC...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGCCCAACCTTTTCAGCTaGAGCAAGTTTCACTCCTGG +
Preference number: 2 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWPNLFS*SKFHSW
Trigger: CCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGG...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR TCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACAATATTTTAATGTCCTaGCCAGCAGCAGTACAAACA +
Preference number: 2 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNNILMS*PAAVQT
Trigger: TGTTTGTACTGCTGCTGGTCAGGACATTAAAATATT...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATGTAGCAGACTCCCTCTaGACACCTGTGGAACATGCT +
Preference number: 2 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNVADSL*TPVEHA
Trigger: AGCATGTTCCACAGGTGTTCAGAGGGAGTCTGCTAC...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGAGAACAGAACCGGTTTaGTCCACTCATATGCACAGG +
Preference number: 2 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWRTEPV*STHMHR
Trigger: CCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCT...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR TCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAATAAGCCCTTTTTACTaGCAATGCACCCAACCTTTT +
Preference number: 2 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLISPFY*QCTQPF
Trigger: AAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTAT...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR TCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCATAAGCCCTTTTTACTaGCAATGCACCCAACCTTTT +
Preference number: 2 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLISPFY*QCTQPF
Trigger: AAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTAT...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR TCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAAGGCTGAAGCACCTTTaGCTTTTCTCTCAAAATTTA +
Preference number: 2 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCERLKHL*LFSQNL
Trigger: TAAATTTTGAGAGAAAAGTCAAAGGTGCTTCAGCCT...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAGTGTGCTTTCGTTTTTaGGACAGTTCTTACCTTTTT +
Preference number: 2 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCEVCFRF*DSSYLF
Trigger: AAAAAGGTAAGAACTGTCTCAAAAACGAAAGCACAC...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR TCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATCTTTCAGGTGCATCCTaGCACACAGGTGGCATAATC +
Preference number: 2 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNLSGAS*HTGGII
Trigger: GATTATGCCACCTGTGTGTCAGGATGCACCTGAAAG...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR GCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCGAGCCTGGAATCCTTTaGTTCATGCATGGCACATTC +
Preference number: 2 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFEPGIL*FMHGTF
Trigger: GAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTC...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR TCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGTGATTCAATTGCATTaGCGTCAAGGTGAGTTCATT +
Preference number: 2 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIVIQLH*RQGEFI
Trigger: AATGAACTCACCTTGACGTCAATGCAATTGAATCAC...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
3UTR-3UTR TCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGAGAACAGAACCGGTTTaGTCCACTCATATGCACAGG +
Preference number: 2 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVRTEPV*STHMHR
Trigger: CCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCT...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR TCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGCTACCTTCAGTTTGTaGATTGGTTTTATCTTTAGG +
Preference number: 2 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLATFSL*IGFIFR
Trigger: CCTAAAGATAAAACCAATTCACAAACTGAAGGTAGC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR TCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACATTGGATGGTAAGGGATaGGCTACGTTTTTAAGTTAT +
Preference number: 2 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETLDGKG*ATFLSY
Trigger: ATAACTTAAAAACGTAGCTCATCCCTTACCATCCAA...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR GCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGAGCCTGGAATCCTTTaGTTCATGCATGGCACATTC +
Preference number: 2 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCEPGIL*FMHGTF
Trigger: GAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTC...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR GCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGAGCCTGGAATCCTTTaGTTCATGCATGGCACATTC +
Preference number: 2 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWEPGIL*FMHGTF
Trigger: GAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR GCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCCAATCCTACATTGGTTaGTCGCTGAATGACAACGGT +
Preference number: 2 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFQSYIG*SLNDNG
Trigger: ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTG...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR TCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGACATTGGTTGCTCGCTaGATGACAACGGTGATTCAA +
Preference number: 2 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWTLVAR*MTTVIQ
Trigger: TTGAATCACCGTTGTCATTCAGCGAGCAACCAATGT...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGATAAGCCCTTTTTACTaGCAATGCACCCAACCTTTT +
Preference number: 2 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVISPFY*QCTQPF
Trigger: AAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTAT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR GCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAGAATCCTTTGCTTCATaGATGGCACATTCTCATTTT +
Preference number: 2 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSESFAS*MAHSHF
Trigger: AAAATGAGAATGTGCCATGCATGAAGCAAAGGATTC...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
3UTR-3UTR GCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGACAGAGCTCTGTACATaGTCCCCACGGAGTAATAAA +
Preference number: 2 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVTELCT*SPRSNK
Trigger: TTTATTACTCCGTGGGGAGCATGTACAGAGCTCTGT...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGAATCCTTTGCTTCATaGATGGCACATTCTCATTTT +
Preference number: 2 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGESFAS*MAHSHF
Trigger: AAAATGAGAATGTGCCATGCATGAAGCAAAGGATTC...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
3UTR-3UTR GCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGGCTCCTAGGACTTGTTaGTTTGAAGAAAATTTTGCA +
Preference number: 2 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWAPRTC*FEENFA
Trigger: TGCAAAATTTTCTTCAAAGCAACAAGTCCTAGGAGC...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR GCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGAATCCTTTGCTTCATaGATGGCACATTCTCATTTT +
Preference number: 2 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCESFAS*MAHSHF
Trigger: AAAATGAGAATGTGCCATGCATGAAGCAAAGGATTC...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR GCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATGAATCCTTTGCTTCATaGATGGCACATTCTCATTTT +
Preference number: 2 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNESFAS*MAHSHF
Trigger: AAAATGAGAATGTGCCATGCATGAAGCAAAGGATTC...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR GCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGCTCCTAGGACTTGTTaGTTTGAAGAAAATTTTGCA +
Preference number: 2 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWAPRTC*FEENFA
Trigger: TGCAAAATTTTCTTCAAAGCAACAAGTCCTAGGAGC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR GCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGCTCCTAGGACTTGTTaGTTTGAAGAAAATTTTGCA +
Preference number: 2 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVAPRTC*FEENFA
Trigger: TGCAAAATTTTCTTCAAAGCAACAAGTCCTAGGAGC...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR CAA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGATATTTGCTATTAGCTaGTCCAGATGCTGGGGGCAG +
Preference number: 3 (lower is better)
Translates to: AARARAKGSAAGHSSEQPIFAIS*SRCWGQ
Trigger: CTGCCCCCAGCATCTGGACAAGCTAATAGCAAATAT...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR CCA 72 bp AGATCGCCACAAGTAGGTGGAAGGATGGGGAGACAGTaGGCAAGAAGCTCAAGGGCCGGGCAGAAGTGGGGT +
Preference number: 3 (lower is better)
Translates to: RSPQVGGRMGRQ*ARSSRAGQKWG
Trigger: ACCCCACTTCTGCCCGGCCCTTGAGCTTCTTGCCCACTGTCTCCCCATCCTTCCACCTACTTGTGGCGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR GCA 72 bp AAAGCAAACTGTGCGGGGGCAGATAAAGCGACACGATaGCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAGGG +
Preference number: 3 (lower is better)
Translates to: KANCAGADKATR*QLPASCSAQQG
Trigger: CCCTTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCCCGCACAGTTTGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR CCA 72 bp CAGTGCATTGCAGGCAAGGCAAGGCACTTTCGTAAGTaGTCCAGTTCTGCCTGGAGCCGCTCCCTTTCTGAG +
Preference number: 3 (lower is better)
Translates to: QCIAGKARHFRK*SSSAWSRSLSE
Trigger: CTCAGAAAGGGAGCGGCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCTTGCCTTGCCTGCAATGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438180.1
3UTR-3UTR CAA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAGGAGCCTGGAATCCTTaGCTTCATGCATGGCACATT +
Preference number: 3 (lower is better)
Translates to: GADKATRCQLPASCSAQQGAWNP*LHAWHI
Trigger: AATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCC...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CAA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAGGAAAAGCCTTTGGGTaGCTTTGTGTGCTCCTAGGA +
Preference number: 3 (lower is better)
Translates to: GADKATRCQLPASCSAQQGKAFG*LCVLLG
Trigger: TCCTAGGAGCACACAAAGCAACCCAAAGGCTTTTCC...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR GCA 72 bp GAAGATGGTCTAAGGACCGAGCCGAGGGCTTTCAGGTaGATCCTGACACACAGGTGGCATAATCGACTCCAG +
Preference number: 3 (lower is better)
Translates to: EDGLRTEPRAFR*ILTHRWHNRLQ
Trigger: CTGGAGTCGATTATGCCACCTGTGTGTCAGGATGCACCTGAAAGCCCTCGGCTCGGTCCTTAGACCATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR GCA 72 bp GTAACTAGGACAAGGAGGAAGACTCGCCCGTTGCTTTaGCTTGGTGTGATGAGCCCAGTTTCTGACCGTTCC +
Preference number: 3 (lower is better)
Translates to: VTRTRRKTRPLL*LGVMSPVSDRS
Trigger: GGAACGGTCAGAAACTGGGCTCATCACACCAAGGCAAAGCAACGGGCGAGTCTTCCTCCTTGTCCTAGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR CCA 72 bp GAGCCGAGGGCTTTCAGGTGCATCCTGACACACAGGTaGCATAATCGACTCCAGAGCAGATTTGAGGTACTC +
Preference number: 3 (lower is better)
Translates to: EPRAFRCILTHR*HNRLQSRFEVL
Trigger: GAGTACCTCAAATCTGCTCTGGAGTCGATTATGCCACCTGTGTGTCAGGATGCACCTGAAAGCCCTCGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR CCA 72 bp ACAGATGGCAGCTCCCTTCCAGGTAATGTAGGAAGATaGTCTAAGGACCGAGCCGAGGGCTTTCAGGTGCAT +
Preference number: 3 (lower is better)
Translates to: TDGSSLPGNVGR*SKDRAEGFQVH
Trigger: ATGCACCTGAAAGCCCTCGGCTCGGTCCTTAGACCATCTTCCTACATTACCTGGAAGGGAGCTGCCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR CCA 72 bp AAGGCAAGGCACTTTCGTAAGTGGTCCAGTTCTGCCTaGAGCCGCTCCCTTTCTGAGACCATCTTCTGTTTC +
Preference number: 3 (lower is better)
Translates to: KARHFRKWSSSA*SRSLSETIFCF
Trigger: GAAACAGAAGATGGTCTCAGAAAGGGAGCGGCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCTTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438180.1
3UTR-3UTR CAA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCGGTTCAGCTCAGACCTaGTGGCTTTTACAAAGCTTT +
Preference number: 3 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAGSAQT*WLLQSF
Trigger: AAAGCTTTGTAAAAGCCACAAGGTCTGAGCTGAACC...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CAA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGATCCAGGGAAAAGCCTTaGGGTTGCTTTGTGTGCTCC +
Preference number: 3 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRSREKP*GCFVCS
Trigger: GGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGA...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CAA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGAGGAAGACTCGCCCGTaGCTTTGCCTTGGTGTGATG +
Preference number: 3 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQRKTRP*LCLGVM
Trigger: CATCACACCAAGGCAAAGCAACGGGCGAGTCTTCCT...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CAA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAAGGAAGACTCGCCCGTaGCTTTGCCTTGGTGTGATG +
Preference number: 3 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCERKTRP*LCLGVM
Trigger: CATCACACCAAGGCAAAGCAACGGGCGAGTCTTCCT...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR TCA 72 bp ACTGGCCCCATCGCTGCGGCAAAAGCAAACTGGGCTTaGGGCATAGTAACATGGCAACACAAGAAAGAACAG +
Preference number: 3 (lower is better)
Translates to: TGPIAAAKANWA*GIVTWQHKKEQ
Trigger: CTGTTCTTTCTTGTGTTGCCATGTTACTATGCCTCAAGCCCAGTTTGCTTTTGCCGCAGCGATGGGGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR CAA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCGATCAAGTTTTAGTGTaGCTAATGGAGCCTTCATGT +
Preference number: 3 (lower is better)
Translates to: PLVRALGSKRGLLDLNTADQVLV*LMEPSC
Trigger: ACATGAAGGCTCCATTAGCAACACTAAAACTTGATC...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CAA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAGGAAAAGCCTTTGGGTaGCTTTGTGTGCTCCTAGGA +
Preference number: 3 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRGKAFG*LCVLLG
Trigger: TCCTAGGAGCACACAAAGCAACCCAAAGGCTTTTCC...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CAA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGGGAGCCTGGAATCCTTaGCTTCATGCATGGCACATT +
Preference number: 3 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQGAWNP*LHAWHI
Trigger: AATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCC...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CAA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAGGAGCCTGGAATCCTTaGCTTCATGCATGGCACATT +
Preference number: 3 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLGAWNP*LHAWHI
Trigger: AATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCC...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR CAA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACAAGAACAGAACCGGTTaGATCCACTCATATGCACAG +
Preference number: 3 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNKNRTG*IHSYAQ
Trigger: CTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTT...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CAA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAAAAAGCAAACTGGGCTaGAGGCATAGTAACATGGCA +
Preference number: 3 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRKSKLG*RHSNMA
Trigger: TGCCATGTTACTATGCCTCAAGCCCAGTTTGCTTTT...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CAA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAACTACCCCCTCCTCCCTaGATAGCAATGGGTAATATT +
Preference number: 3 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCELPPPP*IAMGNI
Trigger: AATATTACCCATTGCTATCAAGGGAGGAGGGGGTAG...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CAA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAGGAGCCTGGAATCCTTaGCTTCATGCATGGCACATT +
Preference number: 3 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSGAWNP*LHAWHI
Trigger: AATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCC...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
3UTR-3UTR CAA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGAAGAACAGAACCGGTTaGATCCACTCATATGCACAG +
Preference number: 3 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQKNRTG*IHSYAQ
Trigger: CTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTT...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR TCA 72 bp AAAACCCAACCCACTGTAGTAACAATCTGGTGGGTGTaGAGCTGTGTATACACAGAGCTCTGTACATGCTCC +
Preference number: 3 (lower is better)
Translates to: KTQPTVVTIWWV*SCVYTELCTCS
Trigger: GGAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACTACAGTGGGTTGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR CCA 72 bp GTTTGTGCTGACCATCTCCATCTTGTGGTGGATCCCTaGCATTTTCTACACTTGTGTGAAACATGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: VCADHLHLVVDP*HFLHLCETCGS
Trigger: TGAGCCACATGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGCACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CAA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCAAAAGCAAACTGGGCTaGAGGCATAGTAACATGGCA +
Preference number: 3 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLKSKLG*RHSNMA
Trigger: TGCCATGTTACTATGCCTCAAGCCCAGTTTGCTTTT...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR CAA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGTTGTCGTATTACTTCTaGAGCAAGAGTAGAGTACTC +
Preference number: 3 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQLSYYF*SKSRVL
Trigger: GAGTACTCTACTCTTGCTCAAGAAGTAATACGACAA...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR TCA 72 bp TCAAAGTATGAAACTAATAGTTGGATGGGGAAACCATaGCTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGT +
Preference number: 3 (lower is better)
Translates to: SKYETNSWMGKP*LGTVSWVVCFR
Trigger: ACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTCCCCATCCAACTATTAGTTTCATACTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR TCA 72 bp TCACTGCTGAAGGTGTGGGCTCCTTTTGATGCTCTCTaGATACTCTTAAGGGTGCAACCTATCAGAATGTTA +
Preference number: 3 (lower is better)
Translates to: SLLKVWAPFDAL*ILLRVQPIRML
Trigger: TAACATTCTGATAGGTTGCACCCTTAAGAGTATTCAGAGAGCATCAAAAGGAGCCCACACCTTCAGCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR TCA 72 bp TTAGAATCCTTCACTGCTGAAGGTGTGGGCTCCTTTTaGTGCTCTCTGAATACTCTTAAGGGTGCAACCTAT +
Preference number: 3 (lower is better)
Translates to: LESFTAEGVGSF*CSLNTLKGATY
Trigger: ATAGGTTGCACCCTTAAGAGTATTCAGAGAGCATCAAAAGGAGCCCACACCTTCAGCAGTGAAGGATTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CAA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGAAAAGCAAACTGGGCTaGAGGCATAGTAACATGGCA +
Preference number: 3 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVKSKLG*RHSNMA
Trigger: TGCCATGTTACTATGCCTCAAGCCCAGTTTGCTTTT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR CAA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGAGCCTTTGGGTTGCTTaGTGTGCTCCTAGGACTTGT +
Preference number: 3 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVSLWVA*CAPRTC
Trigger: ACAAGTCCTAGGAGCACACAAAGCAACCCAAAGGCT...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR CAA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAAAGGCTGAAGCACCTTaGACTTTTCTCTCAAAATTT +
Preference number: 3 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCEKAEAP*TFLSKF
Trigger: AAATTTTGAGAGAAAAGTCAAAGGTGCTTCAGCCTT...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CAA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGCTTAGTTTATTCGTGTaGCCTTACTGGTTTGTATTC +
Preference number: 3 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQLSLFV*PYWFVF
Trigger: GAATACAAACCAGTAAGGCAACACGAATAAACTAAG...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR CCA 72 bp ATACTGGCGGTACATTCGTCTGAGTTTGCTAATAACTaGAAGATTCTTGGCAGACGTACAAAGCAAACTGTG +
Preference number: 3 (lower is better)
Translates to: ILAVHSSEFANN*KILGRRTKQTV
Trigger: CACAGTTTGCTTTGTACGTCTGCCAAGAATCTTCCAGTTATTAGCAAACTCAGACGAATGTACCGCCAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CAA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGAAGAACAGAACCGGTTaGATCCACTCATATGCACAG +
Preference number: 3 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWKNRTG*IHSYAQ
Trigger: CTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTT...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR CAA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGAAAAGCAAACTGGGCTaGAGGCATAGTAACATGGCA +
Preference number: 3 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWKSKLG*RHSNMA
Trigger: TGCCATGTTACTATGCCTCAAGCCCAGTTTGCTTTT...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR-3UTR CAA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATGGTTCAGCTCAGACCTaGTGGCTTTTACAAAGCTTT +
Preference number: 3 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNGSAQT*WLLQSF
Trigger: AAAGCTTTGTAAAAGCCACAAGGTCTGAGCTGAACC...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR-3UTR CAA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATGGTGTGCTTTCGTTTTaGAGACAGTTCTTACCTTTT +
Preference number: 3 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNGVLSF*RQFLPF
Trigger: AAAAGGTAAGAACTGTCTCAAAAACGAAAGCACACC...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR GCA 72 bp TTTAAAAAGAAAAACTGTGGGCAATCCTACATTGGTTaGTCGCTGAATGACAACGGTGATTCAATTGCATTG +
Preference number: 3 (lower is better)
Translates to: FKKKNCGQSYIG*SLNDNGDSIAL
Trigger: CAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
3UTR-3UTR CAA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATTGTTGCCTTACTGGTTaGTATTCTGATTGTCGTATT +
Preference number: 3 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNCCLTG*YSDCRI
Trigger: AATACGACAATCAGAATACAAACCAGTAAGGCAACA...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR TCA 72 bp CTTAGTTTATTCGTGTTGCCTTACTGGTTTGTATTCTaGTTGTCGTATTACTTCTTGAGCAAGAGTAGAGTA +
Preference number: 3 (lower is better)
Translates to: LSLFVLPYWFVF*LSYYFLSKSRV
Trigger: TACTCTACTCTTGCTCAAGAAGTAATACGACAATCAGAATACAAACCAGTAAGGCAACACGAATAAACTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGTGCCGCAGCCGCCGCTaGCGCGCCAGCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPCRSRR*RASHFS
Trigger: GGAGAAGTGGCTGGCGCGGCAGCGGCGGCTGCGGCA...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGCTCCACTGCTGCTCCTaGAGCCGGCATCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPLHCCS*SRHPAG
Trigger: GCCGGCAGGATGCCGGCTCCAGGAGCAGCAGTGGAG...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR GCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGGATGGCTGGTCCCCCTaGCTTCTCCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPDGWSP*LLLRER
Trigger: CCGCTCCCTCAGGAGAAGGCAGGGGGACCAGCCATC...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR GCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGGTCCTGGCCTGGTGGTaGTCTCCGGCCTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPVLAWW*SPACAL
Trigger: CAGAGCACAGGCCGGAGAGCACCACCAGGCCAGGAC...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGTGCGGAGGTCGTCGGTaGTGTGGTAGGGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPCGGRR*CGRAGS
Trigger: GCTTCCGGCCCTACCACACCACCGACGACCTCCGCA...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGCCGTGTGGTGTGGGGTaGGCACCGGATGCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPPCGVG*APDARG
Trigger: ACCCCTTGCATCCGGTGCCCACCCCACACCACACGG...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGGGTTCCAGAGGGCCGTaGGTGCAGCATGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPGSRGP*VQHGAG
Trigger: CCCAGCTCCATGCTGCACCCACGGCCCTCTGGAACC...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGCCGTGGCCCCTCCTCTaGTTTCTCCGGGCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPPWPLL*FLRAED
Trigger: GTCTTCTGCCCGGAGAAAGCAGAGGAGGGGCCACGG...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGCGACTCGCTGCTCAGTaGGGACCCTTTCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPRLAAQ*GPFHAR
Trigger: CCTGGCATGAAAGGGTCCTCACTGAGCAGCGAGTCG...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393243.5
CDS-3UTR GCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGAGGGCTCCCACGGCTTaGTCTTCCCATTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPRAPTA*SSHWCC
Trigger: ACAGCACCAATGGGAAGAGCAAGCCGTGGGAGCCCT...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGATTAGCTTGTCCAGATaGTGGGGGCAGGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPISLSR*WGQAGG
Trigger: TCCCCCTGCCTGCCCCCAGCATCTGGACAAGCTAAT...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAGCAGGGAGCCGGGGGTaGGGATGGGGTAGAACGGGG +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQAGSRG*GWGRTG
Trigger: CCCCGTTCTACCCCATCCCCACCCCCGGCTCCCTGC...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAGCTCCCTCCCTCTCGTaGTGGCGGCGGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQAPSLS*WRRRWL
Trigger: CAGCCACCTCCGCCGCCACCACGAGAGGGAGGGAGC...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGCGCTTCCTCCGCTTCTaGGCCACCAATTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPRFLRF*ATNSSF
Trigger: GAAGGAGGAATTGGTGGCCCAGAAGCGGAGGAAGCG...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGAGGATGGGGAGACAGTaGGCAAGAAGCTCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPRMGRQ*ARSSRA
Trigger: GGCCCTTGAGCTTCTTGCCCACTGTCTCCCCATCCT...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCGGGGGCACCACGTGGTaGACGGGCCGCTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAGGTTW*TGRWRL
Trigger: CAACCTCCAGCGGCCCGTGCACCACGTGGTGCCCCC...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGCTTGCTCTGAATTGTTaGGGGCGACGGGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPLALNC*GRRASL
Trigger: GAGAGAAGCCCGTCGCCCCCAACAATTCAGAGCAAG...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAATGCTGCCCATTGTGCTaGGGTGGAGGGGCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQCCPLC*GGGARL
Trigger: CAGCCGCGCCCCTCCACCCCAGCACAATGGGCAGCA...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GTTCGGCCTAGTGCAAGGGAAACCGTCACCTGGGATATCCCTTCAGGTAGCCCCTGCTGCCCATTGTGCTaGGGTGGAGGGGCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: VRPSARETVTWDIPSGSPCCPLC*GGGARL
Trigger: CAGCCGCGCCCCTCCACCCCAGCACAATGGGCAGCA...GGGGCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCTTGCACTAGGCCGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR TCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCCGGCCACCTGGCTCGTaGCGGTTTGGTCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTARPPGS*RFGPGL
Trigger: CAGGCCAGGACCAAACCGTCACGAGCCAGGTGGCCG...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCCACCAGCGGCACGGCTaGCTGGCGGCTGGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAHQRHG*LAAGLK
Trigger: TTTGAGCCCAGCCGCCAGGCAGCCGTGCCGCTGGTG...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGATGTGCAAACTCTTCTaGCACAAAGGGCTCCCACGG +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPMCKLF*HKGLPR
Trigger: CCGTGGGAGCCCTTTGTGGCAGAAGAGTTTGCACAT...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCTGCTGCCCATTGTaGTGGGGTGGAGGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTASCCPL*WGGGAR
Trigger: CCGCGCCCCTCCACCCCAGCACAATGGGCAGCAGGA...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAATGCCCCGCTCCTCAGTaGCATGGCCACGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQCPAPQ*HGHAAH
Trigger: ATGGGCTGCGTGGCCATGCCACTGAGGAGCGGGGCA...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAGCCGTGGGTGCAGCATaGAGCTGGGGCTTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQAVGAA*SWGLGE
Trigger: TTCGCCCAAGCCCCAGCTCCATGCTGCACCCACGGC...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAGGCGGCGGAGGTGGCTaGTACTTGTCCAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQGGGGG*YLSRGA
Trigger: TGCCCCTCTGGACAAGTACCAGCCACCTCCGCCGCC...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GTTCGGCCTAGTGCAAGGGAAACCGTCACCTGGGATATCCCTTCAGGTAGCCCCGTGGAGGGGCGCGGCTaGAGGACTGCAGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: VRPSARETVTWDIPSGSPVEGRG*RTAAQE
Trigger: TTCCTGAGCTGCAGTCCTCCAGCCGCGCCCCTCCAC...GGGGCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCTTGCACTAGGCCGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGCTTGCCACTTGCGCTTaGGGACTTCCTCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPLATCA*GLPPHL
Trigger: AAGATGAGGAGGAAGTCCCCAAGCGCAAGTGGCAAG...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGAGGGAAACCGTCACCTaGGATATCCCTTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPRETVT*DIPSGS
Trigger: GCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCT...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGCAAGGGAGTGCCCCTTaGATGGTAAGGGATGAGCTA +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPQGSAP*MVRDEL
Trigger: TAGCTCATCCCTTACCATCCAAGGGGCACTCCCTTG...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAAGCTTCAGGGGTCCGCTaGGCTCCCCGAAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQASGVR*APRRWP
Trigger: CGGCCACCTTCGGGGAGCTCAGCGGACCCCTGAAGC...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAGTCTGCCGCTTGCTCTaGATTGTTGGGGGCGACGGG +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQVCRLL*IVGGDG
Trigger: CCCGTCGCCCCCAACAATTCAGAGCAAGCGGCAGAC...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAGTTCCCGACCTCCACTaGTGCTCCTGGAGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQVPDLH*CSWSRH
Trigger: ATGCCGGCTCCAGGAGCAGCAGTGGAGGTCGGGAAC...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR GCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAATGGCCACGCAGCCCATaGAGCTCGGCCACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQWPRSP*SSATGR
Trigger: CCTGCCCGTGGCCGAGCTGCATGGGCTGCGTGGCCA...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAAGTGCTCTCCGGCCTGTaGTCTGCCTCCGCCGGCACC +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQVLSGL*SASAGT
Trigger: GGTGCCGGCGGAGGCAGAGCACAGGCCGGAGAGCAC...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAACTTCTCTGCTCGGGTTaGGGTCAGCTGCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQLLCSG*GQLLRG
Trigger: CCCTCGGAGCAGCTGACCCCAACCCGAGCAGAGAAG...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCCCGTGTGGTGTGGGGTaGGCACCGGATGCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAPCGVG*APDARG
Trigger: ACCCCTTGCATCCGGTGCCCACCCCACACCACACGG...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAATGGTGGCGGCGGAGGTaGCTGGTACTTGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQWWRRR*LVLVQR
Trigger: CCTCTGGACAAGTACCAGCCACCTCCGCCGCCACCA...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAAGCTCCCTCCCTCTCGTaGTGGCGGCGGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQAPSLS*WRRRWL
Trigger: CAGCCACCTCCGCCGCCACCACGAGAGGGAGGGAGC...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAACCGGGCAGGAAGGGCTaGTGCTCCAGGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQPGRKG*CSRLPP
Trigger: GGGAGGGAGCCTGGAGCACCAGCCCTTCCTGCCCGG...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GTTCGGCCTAGTGCAAGGGAAACCGTCACCTGGGATATCCCTTCAGGTAGCCCCTGGCCTTCTCCCCGCTaGCAGGAGCTAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VRPSARETVTWDIPSGSPWPSPR*QELAPG
Trigger: TCCAGGAGCTAGCTCCTGCCAGCGGGGAGAAGGCCA...GGGGCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCTTGCACTAGGCCGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CCA 90 bp CAAGGCACTTTCGTAAGTGGTCCAGTTCTGCCTGGAGCCGCTCCCTTTCTGAGACCCATTGTGCTGGGGTaGAGGGGCGCGGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: QGTFVSGPVLPGAAPFLRPIVLG*RGAAGG
Trigger: TCCTCCAGCCGCGCCCCTCCACCCCAGCACAATGGG...TCTCAGAAAGGGAGCGGCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGATCCTGACACACAGGTaGCATAATCGACTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPILTHR*HNRLQS
Trigger: GCTCTGGAGTCGATTATGCCACCTGTGTGTCAGGAT...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGTCACTGCTGAAGGTGTaGGCTCCTTTTGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPSLLKV*APFDAL
Trigger: GAGAGCATCAAAAGGAGCCCACACCTTCAGCAGTGA...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAAGCTCTGCCGTCAGGCTaGGGCTGTAGTGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQALPSG*GCSAGP
Trigger: AGGCCCGGCACTACAGCCTCAGCCTGACGGCAGAGC...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAACGACACGATGCCAGCTaGCAGCAAGCTGTTCTGCGC +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQRHDAS*QQAVLR
Trigger: GCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCG...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCGGTTTGGTCCTGGCCTaGTGGTGCTCTCCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAGLVLA*WCSPAC
Trigger: ACAGGCCGGAGAGCACCACCAGGCCAGGACCAAACC...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAGCAGCCTCTCCGCGCTaGGGCCAGACATGCGCTCCG +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRAASPR*GQTCAP
Trigger: CGGAGCGCATGTCTGGCCTCAGCGCGGAGAGGCTGC...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGGCTTCAGGGGTCCGCTaGGCTCCCCGAAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEASGVR*APRRWP
Trigger: CGGCCACCTTCGGGGAGCTCAGCGGACCCCTGAAGC...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TCCAGTTCTGCCTGGAGCCGCTCCCTTTCTGAGACCATCTTCTGTTTCTGGCTCGTCTGCCGCTTGCTCTaGATTGTTGGGGGCGACGGG +
Preference number: 4 (lower is better)
Translates to: SSSAWSRSLSETIFCFWLVCRLL*IVGGDG
Trigger: CCCGTCGCCCCCAACAATTCAGAGCAAGCGGCAGAC...GAGCCAGAAACAGAAGATGGTCTCAGAAAGGGAGCGGCTCCAGGCAGAACTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR GCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCGGGGGCACCACGTGGTaGACGGGCCGCTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGGGTTW*TGRWRL
Trigger: CAACCTCCAGCGGCCCGTGCACCACGTGGTGCCCCC...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCGTGCTCTCCGGCCTGTaGTCTGCCTCCGCCGGCACC +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGVLSGL*SASAGT
Trigger: GGTGCCGGCGGAGGCAGAGCACAGGCCGGAGAGCAC...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAAGCGGCTGGGCTCAAATaGAGCCGGGTGGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQAAGLK*SRVAVQ
Trigger: CTGCACAGCCACCCGGCTGCATTTGAGCCCAGCCGC...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCGGGAGGGAGGCCCGCTaGTGGCCCAGGATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGGREAR*WPRMVW
Trigger: CCAGACCATCCTGGGCCAGCAGCGGGCCTCCCTCCC...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAGGGAGGGAGGCCCGCTaGTGGCCCAGGATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRGREAR*WPRMVW
Trigger: CCAGACCATCCTGGGCCAGCAGCGGGCCTCCCTCCC...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAATGCTCTTCCCATTGGTaGTGTGGGACAGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQCSSHW*CGTAAQ
Trigger: CTGTGCCGCTGTCCCACAGCACCAATGGGAAGAGCA...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAAGGGCTCCCACGGCTTaGTCTTCCCATTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQRAPTA*SSHWCC
Trigger: ACAGCACCAATGGGAAGAGCAAGCCGTGGGAGCCCT...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GTTCGGCCTAGTGCAAGGGAAACCGTCACCTGGGATATCCCTTCAGGTAGCCCCAGGGCTCCCACGGCTTaGTCTTCCCATTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VRPSARETVTWDIPSGSPRAPTA*SSHWCC
Trigger: ACAGCACCAATGGGAAGAGCAAGCCGTGGGAGCCCT...GGGGCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCTTGCACTAGGCCGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR GCA 90 bp CCTGGGATATCCCTTCAGGTAGCCCCTAGGCCAGTGCATTGCAGGCAAGGCAAGGCCACGCTCCCTTTATaGTTCTGCAGGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PGISLQVAPRPVHCRQGKATLPL*FCRAFW
Trigger: CCAGAAGGCCCTGCAGAAGCATAAAGGGAGCGTGGC...CTTGCCTTGCCTGCAATGCACTGGCCTAGGGGCTACCTGAAGGGATATCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR GCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCACGGCCTCGATCCCTTaGCACTTGCGCTTGGGGACT +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTATASIP*HLRLGT
Trigger: AGTCCCCAAGCGCAAGTGGCAAGGGATCGAGGCCGT...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCGTGGGAGAGCTGCTCTaGCGTCAGGCTGAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAVGELL*RQAEAV
Trigger: TACAGCCTCAGCCTGACGGCAGAGCAGCTCTCCCAC...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAACCGAGGGCTTTCAGGTaGATCCTGACACACAGGTGG +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQPRAFR*ILTHRW
Trigger: CCACCTGTGTGTCAGGATGCACCTGAAAGCCCTCGG...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAGAGGATGGCGCGGCCTaGGCCGACAGCGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCEEDGAA*ADSALL
Trigger: CAGCAGCGCGCTGTCGGCCCAGGCCGCGCCATCCTC...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR CCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGACCATGGGCACGCGCTTaGGTGTGCTGGCGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRPWARA*VCWRGS
Trigger: GCTCCCCCGCCAGCACACCCAAGCGCGTGCCCATGG...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR CCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCGCAGGGAGCCGGGGGTaGGGATGGGGTAGAACGGGG +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGAGSRG*GWGRTG
Trigger: CCCCGTTCTACCCCATCCCCACCCCCGGCTCCCTGC...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAACATGGAGCTGGGGCTTaGGCGAAATCAGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQHGAGA*AKSEVV
Trigger: CACCACCTCTGATTTCGCCCAAGCCCCAGCTCCATG...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAAGCCACGCAACGGAGGTaGGCCCTGACCTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQATQRR*ALTSSS
Trigger: TGAGGAGGAGGTCAGGGCCCACCTCCGTTGCGTGGC...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GTTCGGCCTAGTGCAAGGGAAACCGTCACCTGGGATATCCCTTCAGGTAGCCCCGAGAGGCTTGCTGCGTaGCTGGTTCACTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: VRPSARETVTWDIPSGSPERLAA*LVHSGR
Trigger: TCTCCCTGAGTGAACCAGCCACGCAGCAAGCCTCTC...GGGGCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCTTGCACTAGGCCGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CCA 90 bp CCTGGGATATCCCTTCAGGTAGCCCCTAGGCCAGTGCATTGCAGGCAAGGCAAGGCACAGGAATGTCCTTaGGTGCAGCGCCCCGGATAT +
Preference number: 4 (lower is better)
Translates to: PGISLQVAPRPVHCRQGKAQECP*VQRPGY
Trigger: ATATCCGGGGCGCTGCACCCAAGGACATTCCTGTGC...CTTGCCTTGCCTGCAATGCACTGGCCTAGGGGCTACCTGAAGGGATATCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCGCAGGGCCTTCTGGGTaGACTGCAGCACTGACTCGT +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAAGPSG*TAALTR
Trigger: ACGAGTCAGTGCTGCAGTCCACCCAGAAGGCCCTGC...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAACAGCTCCACCTCGGCTaGTACATGCTGGAGCCACCG +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQQLHLG*YMLEPP
Trigger: CGGTGGCTCCAGCATGTATCAGCCGAGGTGGAGCTG...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR TCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAGCGGGGGCTCCACAATaGGGCGTTCCCGACCTCCAC +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRAGAPQ*GVPDLH
Trigger: GTGGAGGTCGGGAACGCCTCATTGTGGAGCCCCCGC...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR TCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGGCCGAGGGGAGGCAGTaGGGACATGCGGAGGTCGTC +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEAEGRQ*GHAEVV
Trigger: GACGACCTCCGCATGTCCTCACTGCCTCCCCTCGGC...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACGCCGAGGGGAGGCAGTaGGGACATGCGGAGGTCGTC +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNAEGRQ*GHAEVV
Trigger: GACGACCTCCGCATGTCCTCACTGCCTCCCCTCGGC...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGGCTTCAGGGGTCCGCTaGGCTCCCCGAAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQASGVR*APRRWP
Trigger: CGGCCACCTTCGGGGAGCTCAGCGGACCCCTGAAGC...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCGGTGGACTGCAGCACTaGCTCGTGGAACTGATGTGC +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAGGLQH*LVELMC
Trigger: GCACATCAGTTCCACGAGTCAGTGCTGCAGTCCACC...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GGCCAGTGCATTGCAGGCAAGGCAAGGCACTTTCGTAAGTGGTCCAGTTCTGCCGGTGGACTGCAGCACTaGCTCGTGGAACTGATGTGC +
Preference number: 4 (lower is better)
Translates to: GQCIAGKARHFRKWSSSAGGLQH*LVELMC
Trigger: GCACATCAGTTCCACGAGTCAGTGCTGCAGTCCACC...GGCAGAACTGGACCACTTACGAAAGTGCCTTGCCTTGCCTGCAATGCACTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR TCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGTACACAGTACAAGGCTaGAGCACCTTTGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPYTVQG*STFDFS
Trigger: AGAAAAGTCAAAGGTGCTTCAGCCTTGTACTGTGTA...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACGCACGCGCTTGGGTGTaGTGGCGGGGGAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNARAWV*WRGSCG
Trigger: ACCACAGCTCCCCCGCCAGCACACCCAAGCGCGTGC...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR GCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCACGGGCTTGGGCGCCTaGAGGCCGGCATCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGTGLGA*RPASFS
Trigger: GCTGAAGGATGCCGGCCTGCAGGCGCCCAAGCCCGT...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACGGGGTGGGCACCGGATaGAAGGGGTGTTGGACGGGC +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNGVGTG*KGCWTG
Trigger: GCCCGTCCAACACCCCTTGCATCCGGTGCCCACCCC...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAACGGCCCATATCCAGGTaGTGCTCCAGCACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQRPISR*CSSTCC
Trigger: GCAGCAGGTGCTGGAGCAGCACCTGGATATGGGCCG...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAACTCCCTTTATGCTTCTaGAGGGCCTTCTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQLPLCF*RAFWVD
Trigger: GTCCACCCAGAAGGCCCTGCAGAAGCATAAAGGGAG...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCTCCTGCTGCCCATTGTaGTGGGGTGGAGGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGSCCPL*WGGGAR
Trigger: CCGCGCCCCTCCACCCCAGCACAATGGGCAGCAGGA...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TCCAGTTCTGCCTGGAGCCGCTCCCTTTCTGAGACCATCTTCTGTTTCTGGCTCACGGCCTCGATCCCTTaGCACTTGCGCTTGGGGACT +
Preference number: 4 (lower is better)
Translates to: SSSAWSRSLSETIFCFWLTASIP*HLRLGT
Trigger: AGTCCCCAAGCGCAAGTGGCAAGGGATCGAGGCCGT...GAGCCAGAAACAGAAGATGGTCTCAGAAAGGGAGCGGCTCCAGGCAGAACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR GCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCATTAGCTTGTCCAGATaGTGGGGGCAGGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAISLSR*WGQAGG
Trigger: TCCCCCTGCCTGCCCCCAGCATCTGGACAAGCTAAT...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAATGGAAGGTATCCCTCTaGAGAGGGACAGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQWKVSL*RGTDGS
Trigger: GCTGCCATCTGTCCCTCTGCAGAGGGATACCTTCCA...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAGGGGACTTGGGCTCATaGCTCATGCCTTTCATGCCA +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQGDLGS*LMPFMP
Trigger: TGGCATGAAAGGCATGAGCCATGAGCCCAAGTCCCC...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR CCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGGGCAAAGCTGGAGGATaGCGCGGCCTGGGCCGACAG +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEGKAGG*RGLGRQ
Trigger: CTGTCGGCCCAGGCCGCGCCATCCTCCAGCTTTGCC...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR CCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACGCTCCTCCGCCTGTTTaGCGAGCTTGCGCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNAPPPV*RACAAR
Trigger: CCGCGCTGCGCAAGCTCGCCAAACAGGCGGAGGAGC...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR CCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCGGGAGCTGTGGTTGGTaGCCGGAGAGGACACGGGGG +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGGSCGW*PERTRG
Trigger: CCCCCGTGTCCTCTCCGGCCACCAACCACAGCTCCC...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAACTTCTCTGCTCGGGTTaGGGTCAGCTGCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQLLCSG*GQLLRG
Trigger: CCCTCGGAGCAGCTGACCCCAACCCGAGCAGAGAAG...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACGGTGTTGGACGGGCTTaGGCGCCTGCAGGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNGVGRA*APAGRH
Trigger: ATGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACC...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAACTTCTCCTCCTCATTaGTGCGCTGGATCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQTSPPH*CAGSAG
Trigger: CCCTGCTGATCCAGCGCACCAATGAGGAGGAGAAGT...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAATCAAATGCAGCCGGGTaGCTGTGCAGAGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQSNAAG*LCREWL
Trigger: AAGCCACTCTCTGCACAGCCACCCGGCTGCATTTGA...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACCGGCTGCCTGGCGGCTaGGCTCAAATGCAGCCGGGT +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNRLPGG*AQMQPG
Trigger: ACCCGGCTGCATTTGAGCCCAGCCGCCAGGCAGCCG...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACAGGGAGGCCCGCTGCTaGCCCAGGATGGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNREARC*PRMVWV
Trigger: CACCCAGACCATCCTGGGCCAGCAGCGGGCCTCCCT...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAAACTCTCGACAGCTCCTaGGGCCGGACCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQTLDSS*GRTCSS
Trigger: GCTGGAACAGGTCCGGCCCCAGGAGCTGTCGAGAGT...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCCAGTTCTGCCTGGAGCCGCTCCCTTTCTGAGACCATCTTCTGTTTCTGGCTCGCAGGAGCTAGCTCCTaGACTCTCGACAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSSAWSRSLSETIFCFWLAGASS*TLDSSW
Trigger: CCAGGAGCTGTCGAGAGTCCAGGAGCTAGCTCCTGC...GAGCCAGAAACAGAAGATGGTCTCAGAAAGGGAGCGGCTCCAGGCAGAACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCCCCATTGTGCTGGGGTaGAGGGGCGCGGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGPIVLG*RGAAGG
Trigger: TCCTCCAGCCGCGCCCCTCCACCCCAGCACAATGGG...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACTGCTGCCCATTGTGCTaGGGTGGAGGGGCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNCCPLC*GGGARL
Trigger: CAGCCGCGCCCCTCCACCCCAGCACAATGGGCAGCA...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGATGCTGCCCATTGTGCTaGGGTGGAGGGGCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRCCPLC*GGGARL
Trigger: CAGCCGCGCCCCTCCACCCCAGCACAATGGGCAGCA...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAGCAGCCTCTCCGCGCTaGGGCCAGACATGCGCTCCG +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETAASPR*GQTCAP
Trigger: CGGAGCGCATGTCTGGCCTCAGCGCGGAGAGGCTGC...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAATGCCATGGTTGGAGATaGGGCTGGGCACCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQCHGWR*GWAPCG
Trigger: ACCACACGGTGCCCAGCCTCATCTCCAACCATGGCA...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAGCTTCAGGGGTCCGCTaGGCTCCCCGAAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLASGVR*APRRWP
Trigger: CGGCCACCTTCGGGGAGCTCAGCGGACCCCTGAAGC...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCCAGCGCCAGTCTCGGTaGAGGCGTCTGCCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGQRQSR*RRLPLA
Trigger: AGCAAGCGGCAGACGCCTTCACCGAGACTGGCGCTG...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAGCCCATGTGTGCACATaGCTGTCACACATGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQAHVCT*LSHMGS
Trigger: AGAACCCATGTGTGACAGTCATGTGCACACATGGGC...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCGGGGTGGTAGTAGGCTaGAGCAGTGGCCGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGGVVVG*SSGRVQ
Trigger: CTGGACCCGGCCACTGCTGCAGCCTACTACCACCCC...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACGGGGTGGTAGTAGGCTaGAGCAGTGGCCGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNGVVVG*SSGRVQ
Trigger: CTGGACCCGGCCACTGCTGCAGCCTACTACCACCCC...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGGGGGTGGTAGTAGGCTaGAGCAGTGGCCGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEGVVVG*SSGRVQ
Trigger: CTGGACCCGGCCACTGCTGCAGCCTACTACCACCCC...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCTGCATCGCTGATGGGTaGAGTGGGGGCAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGCIADG*SGGREP
Trigger: CGGCTCCCTGCCCCCACTGCACCCATCAGCGATGCA...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAGTGCTCTCCGGCCTGTaGTCTGCCTCCGCCGGCACC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLVLSGL*SASAGT
Trigger: GGTGCCGGCGGAGGCAGAGCACAGGCCGGAGAGCAC...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACGCAGCCGGGTGGCTGTaGAGAGAGTGGCTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNAAGWL*REWLSA
Trigger: GGCCGAAAGCCACTCTCTGCACAGCCACCCGGCTGC...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGAGTTTGAGGGGCGGCTaGTCGGCCACGCAACGGAGG +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNESLRGG*SATQRR
Trigger: CCTCCGTTGCGTGGCCGAGCAGCCGCCCCTCAAACT...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CCTGGGATATCCCTTCAGGTAGCCCCTAGGCCAGTGCATTGCAGGCAAGGCAAGGCTGACAGTGCCTTCTaGTTCATGGCACGGAGCATT +
Preference number: 4 (lower is better)
Translates to: PGISLQVAPRPVHCRQGKADSAF*FMARSI
Trigger: AATGCTCCGTGCCATGAAGCAGAAGGCACTGTCAGC...CTTGCCTTGCCTGCAATGCACTGGCCTAGGGGCTACCTGAAGGGATATCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR GCA 90 bp GGCCAGTGCATTGCAGGCAAGGCAAGGCACTTTCGTAAGTGGTCCAGTTCTGCCAGGAATGTCCTTGGGTaGAGCGCCCCGGATATAGTG +
Preference number: 4 (lower is better)
Translates to: GQCIAGKARHFRKWSSSARNVLG*SAPDIV
Trigger: CACTATATCCGGGGCGCTGCACCCAAGGACATTCCT...GGCAGAACTGGACCACTTACGAAAGTGCCTTGCCTTGCCTGCAATGCACTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR GCA 90 bp CAAGGCACTTTCGTAAGTGGTCCAGTTCTGCCTGGAGCCGCTCCCTTTCTGAGAGCCTTCTGGGTGGACTaGAGCACTGACTCGTGGAAC +
Preference number: 4 (lower is better)
Translates to: QGTFVSGPVLPGAAPFLRAFWVD*STDSWN
Trigger: GTTCCACGAGTCAGTGCTGCAGTCCACCCAGAAGGC...TCTCAGAAAGGGAGCGGCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR GCA 90 bp ATTGCAGGCAAGGCAAGGCACTTTCGTAAGTGGTCCAGTTCTGCCTGGAGCCGCCTCCCTTTATGCTTCTaGAGGGCCTTCTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: IAGKARHFRKWSSSAWSRLPLCF*RAFWVD
Trigger: GTCCACCCAGAAGGCCCTGCAGAAGCATAAAGGGAG...GCGGCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCTTGCCTTGCCTGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR GCA 90 bp TTTCGTAAGTGGTCCAGTTCTGCCTGGAGCCGCTCCCTTTCTGAGACCATCTTCGTGGGAGAGCTGCTCTaGCGTCAGGCTGAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: FRKWSSSAWSRSLSETIFVGELL*RQAEAV
Trigger: TACAGCCTCAGCCTGACGGCAGAGCAGCTCTCCCAC...GAAGATGGTCTCAGAAAGGGAGCGGCTCCAGGCAGAACTGGACCACTTACGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR GCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAATTTCGAGGGGAGGCCTaGAGCACAGCCCCTCGAGTT +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQFRGEA*STAPRV
Trigger: AACTCGAGGGGCTGTGCTGCAGGCCTCCCCTCGAAA...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTGGAAGGTATCCCTCTaGAGAGGGACAGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAWKVSL*RGTDGS
Trigger: GCTGCCATCTGTCCCTCTGCAGAGGGATACCTTCCA...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAACGGGGGACGACTCGCTaGTCAGTGAGGACCCTTTCA +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQRGTTR*SVRTLS
Trigger: TGAAAGGGTCCTCACTGAGCAGCGAGTCGTCCCCCG...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393243.5
CDS-3UTR CCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACACCATGGGCACGCGCTTaGGTGTGCTGGCGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETPWARA*VCWRGS
Trigger: GCTCCCCCGCCAGCACACCCAAGCGCGTGCCCATGG...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR CCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAATTCACGGTTTTGGTTaGAGCGATGGTCACCACGGG +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQIHGFG*SDGHHG
Trigger: CCCGTGGTGACCATCGCTCCAACCAAAACCGTGAAT...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR CCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGTGGTGCACGGGCCGCTaGAGGTTGAGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEWCTGR*RLSGGK
Trigger: CTTCCCGCCACTCAACCTCCAGCGGCCCGTGCACCA...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGCCTCGGTCACGGTACTaGGGGGCACCACGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEPRSRY*GAPRGA
Trigger: TGCACCACGTGGTGCCCCCCAGTACCGTGACCGAGG...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAGCAGGGAGCCGGGGGTaGGGATGGGGTAGAACGGGG +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLAGSRG*GWGRTG
Trigger: CCCCGTTCTACCCCATCCCCACCCCCGGCTCCCTGC...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCCGCTCCTCAGTGGCATaGCCACGCAGCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGRSSVA*PRSPCS
Trigger: GCTGCATGGGCTGCGTGGCCATGCCACTGAGGAGCG...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGCCGTGTGGTGTGGGGTaGGCACCGGATGCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEPCGVG*APDARG
Trigger: ACCCCTTGCATCCGGTGCCCACCCCACACCACACGG...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAGGTTCCAGAGGGCCGTaGGTGCAGCATGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRGSRGP*VQHGAG
Trigger: CCCAGCTCCATGCTGCACCCACGGCCCTCTGGAACC...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAAGCGGCACGGCTGCCTaGCGGCTGGGCTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRSGTAA*RLGSNA
Trigger: TGCATTTGAGCCCAGCCGCCAGGCAGCCGTGCCGCT...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAGGCGGCGGAGGTGGCTaGTACTTGTCCAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRGGGGG*YLSRGA
Trigger: TGCCCCTCTGGACAAGTACCAGCCACCTCCGCCGCC...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAACCCTCCCTCTCGTGGTaGCGGCGGAGGTGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCEPSLSW*RRRWLV
Trigger: TACCAGCCACCTCCGCCGCCACCACGAGAGGGAGGG...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGCCCTCCCTCTCGTGGTaGCGGCGGAGGTGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQPSLSW*RRRWLV
Trigger: TACCAGCCACCTCCGCCGCCACCACGAGAGGGAGGG...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGCTCCCTCCCTCTCGTaGTGGCGGCGGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLAPSLS*WRRRWL
Trigger: CAGCCACCTCCGCCGCCACCACGAGAGGGAGGGAGC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GGCCAGTGCATTGCAGGCAAGGCAAGGCACTTTCGTAAGTGGTCCAGTTCTGCCCTTGCTCTGAATTGTTaGGGGCGACGGGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GQCIAGKARHFRKWSSSALALNC*GRRASL
Trigger: GAGAGAAGCCCGTCGCCCCCAACAATTCAGAGCAAG...GGCAGAACTGGACCACTTACGAAAGTGCCTTGCCTTGCCTGCAATGCACTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAAGCAGGGCCTTCTGGGTaGACTGCAGCACTGACTCGT +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQAGPSG*TAALTR
Trigger: ACGAGTCAGTGCTGCAGTCCACCCAGAAGGCCCTGC...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CCTGGGATATCCCTTCAGGTAGCCCCTAGGCCAGTGCATTGCAGGCAAGGCAAGCTTGCCACTTGCGCTTaGGGACTTCCTCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: PGISLQVAPRPVHCRQGKLATCA*GLPPHL
Trigger: AAGATGAGGAGGAAGTCCCCAAGCGCAAGTGGCAAG...CTTGCCTTGCCTGCAATGCACTGGCCTAGGGGCTACCTGAAGGGATATCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CCA 90 bp GTTCGGCCTAGTGCAAGGGAAACCGTCACCTGGGATATCCCTTCAGGTAGCCCCAGGGAAACCGTCACCTaGGATATCCCTTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: VRPSARETVTWDIPSGSPRETVT*DIPSGS
Trigger: GCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCT...GGGGCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCTTGCACTAGGCCGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACCCCCAGACCAGTGACTaGCAGCCCTGGCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNPQTSD*QPWPLV
Trigger: CACCAGAGGCCAGGGCTGCCAGTCACTGGTCTGGGG...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAGCGGGGGCTCCACAATaGGGCGTTCCCGACCTCCAC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLAGAPQ*GVPDLH
Trigger: GTGGAGGTCGGGAACGCCTCATTGTGGAGCCCCCGC...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR TCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACACGGGCCGCTGGAGGTTaGGTGGCGGGAAGCGGGAAT +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETRAAGG*VAGSGN
Trigger: ATTCCCGCTTCCCGCCACTCAACCTCCAGCGGCCCG...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR TCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCCGGAACTCGGACACCTaGGACTGCCGGTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGRNSDT*DCRSSF
Trigger: GAAGGAGGACCGGCAGTCTCAGGTGTCCGAGTTCCG...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCCGGCCACCTGGCTCGTaGCGGTTTGGTCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLRPPGS*RFGPGL
Trigger: CAGGCCAGGACCAAACCGTCACGAGCCAGGTGGCCG...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTACCAGGTCCAGCTTGCTaGCCAGCCTCCGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLPGPAC*PASGAA
Trigger: AGCAGCGCCGGAGGCTGGTCAGCAAGCTGGACCTGG...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAAACGGAGGTGGGCCCTaGCCTCCTCCTCATCGCTCT +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRNGGGP*PPPHRS
Trigger: AGAGCGATGAGGAGGAGGTCAGGGCCCACCTCCGTT...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAAGGACGTGTCCAGTTTaGGGGGCGGCTGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCERTCPV*GAAARP
Trigger: TGGCCGAGCAGCCGCCCCTCAAACTGGACACGTCCT...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCGTCTGCCGCTTGCTCTaGATTGTTGGGGGCGACGGG +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGVCRLL*IVGGDG
Trigger: CCCGTCGCCCCCAACAATTCAGAGCAAGCGGCAGAC...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGCAGCGCCAGTCTCGGTaGAGGCGTCTGCCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQQRQSR*RRLPLA
Trigger: AGCAAGCGGCAGACGCCTTCACCGAGACTGGCGCTG...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAAGGTGGACTGCAGCACTaGCTCGTGGAACTGATGTGC +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQGGLQH*LVELMC
Trigger: GCACATCAGTTCCACGAGTCAGTGCTGCAGTCCACC...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGCTCTGCCGTCAGGCTaGGGCTGTAGTGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLALPSG*GCSAGP
Trigger: AGGCCCGGCACTACAGCCTCAGCCTGACGGCAGAGC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAGCTCTGCCGTCAGGCTaGGGCTGTAGTGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETALPSG*GCSAGP
Trigger: AGGCCCGGCACTACAGCCTCAGCCTGACGGCAGAGC...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACACTCCTGGGGAGGAATaGGACTGGCCCCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNTPGEE*DWPHRC
Trigger: GCAGCGATGGGGCCAGTCTCATTCCTCCCCAGGAGT...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGACTCCTGGGGAGGAATaGGACTGGCCCCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNETPGEE*DWPHRC
Trigger: GCAGCGATGGGGCCAGTCTCATTCCTCCCCAGGAGT...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAACCCAACCTTTTCAGCTaGAGCAAGTTTCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQPNLFS*SKFHSW
Trigger: CCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGG...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCGCCCATGTGTGCACATaGCTGTCACACATGGGTTCT +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAAHVCT*LSHMGS
Trigger: AGAACCCATGTGTGACAGTCATGTGCACACATGGGC...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGGTGTGCTTTCGTTTTTaGGACAGTTCTTACCTTTTT +
Preference number: 4 (lower is better)
Translates to: AARARAKGSAAGHSSEQPVCFRF*DSSYLF
Trigger: AAAAAGGTAAGAACTGTCTCAAAAACGAAAGCACAC...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGGACATGCGCTCCGAGTaGAGCGCTGCCAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEDMRSE*SAARDE
Trigger: CTCATCCCTGGCAGCGCTGCACTCGGAGCGCATGTC...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGAGCTCCTCGTCCATCTaGAGCCTCTCCGCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNESSSSI*SLSALR
Trigger: CCTCAGCGCGGAGAGGCTGCAGATGGACGAGGAGCT...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAACGGGCTTGGGCGCCTaGAGGCCGGCATCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLTGLGA*RPASFS
Trigger: GCTGAAGGATGCCGGCCTGCAGGCGCCCAAGCCCGT...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAGGGGTGGGCACCGGATaGAAGGGGTGTTGGACGGGC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLGVGTG*KGCWTG
Trigger: GCCCGTCCAACACCCCTTGCATCCGGTGCCCACCCC...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGGCGGCTGGGCTCAAATaGAGCCGGGTGGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQAAGLK*SRVAVQ
Trigger: CTGCACAGCCACCCGGCTGCATTTGAGCCCAGCCGC...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAGGGAGGGAGGCCCGCTaGTGGCCCAGGATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSGREAR*WPRMVW
Trigger: CCAGACCATCCTGGGCCAGCAGCGGGCCTCCCTCCC...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAAGTTTGAGGGGCGGCTaGTCGGCCACGCAACGGAGG +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCESLRGG*SATQRR
Trigger: CCTCCGTTGCGTGGCCGAGCAGCCGCCCCTCAAACT...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CAAGGCACTTTCGTAAGTGGTCCAGTTCTGCCTGGAGCCGCTCCCTTTCTGAGAACATCCAGAGAGGCTTaGTGCGTGGCTGGTTCACTC +
Preference number: 4 (lower is better)
Translates to: QGTFVSGPVLPGAAPFLRTSREA*CVAGSL
Trigger: GAGTGAACCAGCCACGCAGCAAGCCTCTCTGGATGT...TCTCAGAAAGGGAGCGGCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR GCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCTCCTGCTGCCCATTGTaGTGGGGTGGAGGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLSCCPL*WGGGAR
Trigger: CCGCGCCCCTCCACCCCAGCACAATGGGCAGCAGGA...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTATCCTGCTGCCCATTGTaGTGGGGTGGAGGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLSCCPL*WGGGAR
Trigger: CCGCGCCCCTCCACCCCAGCACAATGGGCAGCAGGA...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCATCCAACCAAGGGAGTaGCCCTTGGATGGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAIQPRE*PLDGKG
Trigger: TCCCTTACCATCCAAGGGGCACTCCCTTGGTTGGAT...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCACCATGGGCACGCGCTTaGGTGTGCTGGCGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSPWARA*VCWRGS
Trigger: GCTCCCCCGCCAGCACACCCAAGCGCGTGCCCATGG...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTACTCCACTGCTGCTCCTaGAGCCGGCATCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLLHCCS*SRHPAG
Trigger: GCCGGCAGGATGCCGGCTCCAGGAGCAGCAGTGGAG...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCCCTGCACAACTGAGCTaGGGGAGAGGCCGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGPAQLS*GRGRRG
Trigger: ACCCCTTCGGCCTCTCCCCCAGCTCAGTTGTGCAGG...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGTGGTGCACGGGCCGCTaGAGGTTGAGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQWCTGR*RLSGGK
Trigger: CTTCCCGCCACTCAACCTCCAGCGGCCCGTGCACCA...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGCCTCGGTCACGGTACTaGGGGGCACCACGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQPRSRY*GAPRGA
Trigger: TGCACCACGTGGTGCCCCCCAGTACCGTGACCGAGG...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAAGTAGGCTGCAGCAGTaGCCGGGTCCAGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLSRLQQ*PGPGRG
Trigger: CCCTCGGCCTGGACCCGGCCACTGCTGCAGCCTACT...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAACGCTCCTCAGTGGCATaGCCACGCAGCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCERSSVA*PRSPCS
Trigger: GCTGCATGGGCTGCGTGGCCATGCCACTGAGGAGCG...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGGTGTTGGACGGGCTTaGGCGCCTGCAGGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLGVGRA*APAGRH
Trigger: ATGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAATCCTCATTGGTGCGCTaGATCAGCAGGGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQSSLVR*ISRAVA
Trigger: TGCCACAGCCCTGCTGATCCAGCGCACCAATGAGGA...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGTTGGTCCTGGCCTGGTaGTGCTCTCCGGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNELVLAW*CSPACA
Trigger: AGCACAGGCCGGAGAGCACCACCAGGCCAGGACCAA...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACTTGGTCCTGGCCTGGTaGTGCTCTCCGGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNLVLAW*CSPACA
Trigger: AGCACAGGCCGGAGAGCACCACCAGGCCAGGACCAA...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGAGCGGCACGGCTGCCTaGCGGCTGGGCTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQSGTAA*RLGSNA
Trigger: TGCATTTGAGCCCAGCCGCCAGGCAGCCGTGCCGCT...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACTGGTGGCGGCGGAGGTaGCTGGTACTTGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNWWRRR*LVLVQR
Trigger: CCTCTGGACAAGTACCAGCCACCTCCGCCGCCACCA...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCACCGGGCAGGAAGGGCTaGTGCTCCAGGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSPGRKG*CSRLPP
Trigger: GGGAGGGAGCCTGGAGCACCAGCCCTTCCTGCCCGG...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAACCAGGATGGTCTGGGTaGACTTCTCGAGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQPGWSG*TSRAQP
Trigger: TGGCTGAGCTCGAGAAGTCCACCCAGACCATCCTGG...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACACTCTCGACAGCTCCTaGGGCCGGACCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNTLDSS*GRTCSS
Trigger: GCTGGAACAGGTCCGGCCCCAGGAGCTGTCGAGAGT...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAGTGGAGGGGCGCGGCTaGAGGACTGCAGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCEVEGRG*RTAAQE
Trigger: TTCCTGAGCTGCAGTCCTCCAGCCGCGCCCCTCCAC...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAAACTCCGCCACGCTGTaGGAGAGCTGCTCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRNSATL*ESCSAV
Trigger: GACGGCAGAGCAGCTCTCCCACAGCGTGGCGGAGTT...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTACGACTCGCTGCTCAGTaGGGACCCTCTGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLRLAAQ*GPSGLL
Trigger: GAGGAGCCCAGAGGGTCCTCACTGAGCAGCGAGTCG...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR TCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAGCCGAGGGGAGGCAGTaGGGACATGCGGAGGTCGTC +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSAEGRQ*GHAEVV
Trigger: GACGACCTCCGCATGTCCTCACTGCCTCCCCTCGGC...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCGGCCACCTGGCTCGTaGCGGTTTGGTCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLRPPGS*RFGPGL
Trigger: CAGGCCAGGACCAAACCGTCACGAGCCAGGTGGCCG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTCCAGGTCCAGCTTGCTaGCCAGCCTCCGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIPGPAC*PASGAA
Trigger: AGCAGCGCCGGAGGCTGGTCAGCAAGCTGGACCTGG...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAGCTCTGCCGTCAGGCTaGGGCTGTAGTGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSALPSG*GCSAGP
Trigger: AGGCCCGGCACTACAGCCTCAGCCTGACGGCAGAGC...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR TCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCCCCAACCTTTTCAGCTaGAGCAAGTTTCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAPNLFS*SKFHSW
Trigger: CCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGG...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGGAGGCAGTGAGGACATaGGGAGGTCGTCGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEEAVRT*GGRRWC
Trigger: ACACCACCGACGACCTCCGCATGTCCTCACTGCCTC...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAGACATGCGCTCCGAGTaGAGCGCTGCCAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCEDMRSE*SAARDE
Trigger: CTCATCCCTGGCAGCGCTGCACTCGGAGCGCATGTC...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTTGGCCACGCAGCCCATaGAGCTCGGCCACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGWPRSP*SSATGR
Trigger: CCTGCCCGTGGCCGAGCTGCATGGGCTGCGTGGCCA...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAGGGGTGGGCACCGGATaGAAGGGGTGTTGGACGGGC +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSGVGTG*KGCWTG
Trigger: GCCCGTCCAACACCCCTTGCATCCGGTGCCCACCCC...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAATGCCGCAGCCGCCGCTaGCGCGCCAGCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKCRSRR*RASHFS
Trigger: GGAGAAGTGGCTGGCGCGGCAGCGGCGGCTGCGGCA...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGTGCCGCAGCCGCCGCTaGCGCGCCAGCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWCRSRR*RASHFS
Trigger: GGAGAAGTGGCTGGCGCGGCAGCGGCGGCTGCGGCA...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAGTCCTGGCCTGGTGGTaGTCTCCGGCCTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLVLAWW*SPACAL
Trigger: CAGAGCACAGGCCGGAGAGCACCACCAGGCCAGGAC...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAGTCCTGGCCTGGTGGTaGTCTCCGGCCTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETVLAWW*SPACAL
Trigger: CAGAGCACAGGCCGGAGAGCACCACCAGGCCAGGAC...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAGCAGCCGGGTGGCTGTaGAGAGAGTGGCTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETAAGWL*REWLSA
Trigger: GGCCGAAAGCCACTCTCTGCACAGCCACCCGGCTGC...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGCGGCTGGGCTCAAATaGAGCCGGGTGGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLAAGLK*SRVAVQ
Trigger: CTGCACAGCCACCCGGCTGCATTTGAGCCCAGCCGC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTCACCAGCGGCACGGCTaGCTGGCGGCTGGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIHQRHG*LAAGLK
Trigger: TTTGAGCCCAGCCGCCAGGCAGCCGTGCCGCTGGTG...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCACACCAGCGGCACGGCTaGCTGGCGGCTGGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSHQRHG*LAAGLK
Trigger: TTTGAGCCCAGCCGCCAGGCAGCCGTGCCGCTGGTG...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCACGGCCTCGATCCCTTaGCACTTGCGCTTGGGGACT +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGTASIP*HLRLGT
Trigger: AGTCCCCAAGCGCAAGTGGCAAGGGATCGAGGCCGT...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GTTCGGCCTAGTGCAAGGGAAACCGTCACCTGGGATATCCCTTCAGGTAGCCCCTGCCGCTCCAGATTTTaGTCTTCTATGTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: VRPSARETVTWDIPSGSPCRSRF*SSMCSW
Trigger: CCAGGAACACATAGAAGAGCAAAATCTGGAGCGGCA...GGGGCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCTTGCACTAGGCCGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR GCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAGAGCCTGGAATCCTTTaGTTCATGCATGGCACATTC +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQEPGIL*FMHGTF
Trigger: GAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTC...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGGACTGGCCCCATCGCTaGGGCAAAAGCAAACTGGGC +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEDWPHR*GKSKLG
Trigger: GCCCAGTTTGCTTTTGCCGCAGCGATGGGGCCAGTC...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCGCGCGGCGGCAAAGCTaGAGGATGGCGCGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICARRQS*RMARPG
Trigger: CCCAGGCCGCGCCATCCTCCAGCTTTGCCGCCGCGC...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR CCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCTCCACTGCTGCTCCTaGAGCCGGCATCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLLHCCS*SRHPAG
Trigger: GCCGGCAGGATGCCGGCTCCAGGAGCAGCAGTGGAG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAGCAGGTGCGAGGGGATaGCTGGTCCCCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLAGARG*LVPLPS
Trigger: AGAAGGCAGGGGGACCAGCCATCCCCTCGCACCTGC...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGCAGGTGCGAGGGGATaGCTGGTCCCCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLAGARG*LVPLPS
Trigger: AGAAGGCAGGGGGACCAGCCATCCCCTCGCACCTGC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTAGTAGGCTGCAGCAGTaGCCGGGTCCAGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSISRLQQ*PGPGRG
Trigger: CCCTCGGCCTGGACCCGGCCACTGCTGCAGCCTACT...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGGCAGGGAGCCGGGGGTaGGGATGGGGTAGAACGGGG +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVAGSRG*GWGRTG
Trigger: CCCCGTTCTACCCCATCCCCACCCCCGGCTCCCTGC...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTACGCTCCTCAGTGGCATaGCCACGCAGCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLRSSVA*PRSPCS
Trigger: GCTGCATGGGCTGCGTGGCCATGCCACTGAGGAGCG...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGGTGTTGGACGGGCTTaGGCGCCTGCAGGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIGVGRA*APAGRH
Trigger: ATGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACC...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTACCGTGTGGTGTGGGGTaGGCACCGGATGCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLPCGVG*APDARG
Trigger: ACCCCTTGCATCCGGTGCCCACCCCACACCACACGG...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAGGTTTGGTCCTGGCCTaGTGGTGCTCTCCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCEGLVLA*WCSPAC
Trigger: ACAGGCCGGAGAGCACCACCAGGCCAGGACCAAACC...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAGCCGTGGGTGCAGCATaGAGCTGGGGCTTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLAVGAA*SWGLGE
Trigger: TTCGCCCAAGCCCCAGCTCCATGCTGCACCCACGGC...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAGGTTCCAGAGGGCCGTaGGTGCAGCATGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETGSRGP*VQHGAG
Trigger: CCCAGCTCCATGCTGCACCCACGGCCCTCTGGAACC...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAAGCGGCACGGCTGCCTaGCGGCTGGGCTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETSGTAA*RLGSNA
Trigger: TGCATTTGAGCCCAGCCGCCAGGCAGCCGTGCCGCT...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGAGGCTCACGCTTCCGTaGCCCCTCCTCTGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNERLTLP*PLLCFL
Trigger: GAGAAAGCAGAGGAGGGGCCACGGAAGCGTGAGCCT...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAAGGGAGGCCCGCTGCTaGCCCAGGATGGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSREARC*PRMVWV
Trigger: CACCCAGACCATCCTGGGCCAGCAGCGGGCCTCCCT...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTTCTCAGCGCTGATGTaGGTCAGGTTGAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAFSALM*VRLKMV
Trigger: GACCATCTTCAACCTGACCCACATCAGCGCTGAGAA...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACGCAGGAGCTAGCTCCTaGACTCTCGACAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNAGASS*TLDSSW
Trigger: CCAGGAGCTGTCGAGAGTCCAGGAGCTAGCTCCTGC...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGTGGAGGGGCGCGGCTaGAGGACTGCAGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLVEGRG*RTAAQE
Trigger: TTCCTGAGCTGCAGTCCTCCAGCCGCGCCCCTCCAC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCACCCATTGTGCTGGGGTaGAGGGGCGCGGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSPIVLG*RGAAGG
Trigger: TCCTCCAGCCGCGCCCCTCCACCCCAGCACAATGGG...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGGCGGGGGCTCCACAATaGGGCGTTCCCGACCTCCAC +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVAGAPQ*GVPDLH
Trigger: GTGGAGGTCGGGAACGCCTCATTGTGGAGCCCCCGC...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR TCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTAGGAGTCGTCCATCCTaGAGGCCGGGTGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIRSRPS*RPGGGR
Trigger: CCTTCCCCCACCCGGCCTTCAGGATGGACGACTCCT...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTAGGAGTCGTCCATCCTaGAGGCCGGGTGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLRSRPS*RPGGGR
Trigger: CCTTCCCCCACCCGGCCTTCAGGATGGACGACTCCT...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAAGCAGCCTCTCCGCGCTaGGGCCAGACATGCGCTCCG +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKAASPR*GQTCAP
Trigger: CGGAGCGCATGTCTGGCCTCAGCGCGGAGAGGCTGC...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGTGCCATGGTTGGAGATaGGGCTGGGCACCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQCHGWR*GWAPCG
Trigger: ACCACACGGTGCCCAGCCTCATCTCCAACCATGGCA...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTAGGACGTGTCCAGTTTaGGGGGCGGCTGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLRTCPV*GAAARP
Trigger: TGGCCGAGCAGCCGCCCCTCAAACTGGACACGTCCT...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCACAGCGCCAGTCTCGGTaGAGGCGTCTGCCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSQRQSR*RRLPLA
Trigger: AGCAAGCGGCAGACGCCTTCACCGAGACTGGCGCTG...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR TCA 90 bp GTTCGGCCTAGTGCAAGGGAAACCGTCACCTGGGATATCCCTTCAGGTAGCCCCACATTGGTTGCTCGCTaGATGACAACGGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: VRPSARETVTWDIPSGSPTLVAR*MTTVIQ
Trigger: TTGAATCACCGTTGTCATTCAGCGAGCAACCAATGT...GGGGCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCTTGCACTAGGCCGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR TCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTATGCTGGTCACAGCAGTaGGCAGCCGGCACACAGGTC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLCWSQQ*AAGTQV
Trigger: GACCTGTGTGCCGGCTGCTCACTGCTGTGACCAGCA...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAAACCTGTGGAACATGCTaGCCTCCCAGTGTCTTTCGA +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQTCGTC*PPSVFR
Trigger: TCGAAAGACACTGGGAGGTCAGCATGTTCCACAGGT...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCCTATTGCTAGCACAGTaGCACTGCTCCCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGLLLAQ*HCSHPG
Trigger: CCCAGGGTGGGAGCAGTGTCACTGTGCTAGCAATAG...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCGACTCGCTGCTCAGTaGGGACCCTGCGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVRLAAQ*GPCGRW
Trigger: CCAGCGTCCGCAGGGTCCTCACTGAGCAGCGAGTCG...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405402.6
CDS-3UTR GCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACCTCGGCTGATACATaGTGGAGCCACCGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCETSADT*WSHRRP
Trigger: TGGGCGACGGTGGCTCCAGCATGTATCAGCCGAGGT...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR GCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCGGGGGACGACTCGCTaGTCAGTGAGGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLRGTTR*SVRTLW
Trigger: CCAGAGGGTCCTCACTGAGCAGCGAGTCGTCCCCCG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR GCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAGTTCCCGACCTCCACTaGTGCTCCTGGAGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETVPDLH*CSWSRH
Trigger: ATGCCGGCTCCAGGAGCAGCAGTGGAGGTCGGGAAC...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR GCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCGGGGGCACCACGTGGTaGACGGGCCGCTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICGGTTW*TGRWRL
Trigger: CAACCTCCAGCGGCCCGTGCACCACGTGGTGCCCCC...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAGAGGCAGTGAGGACATaGGGAGGTCGTCGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCEEAVRT*GGRRWC
Trigger: ACACCACCGACGACCTCCGCATGTCCTCACTGCCTC...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAGGGGTGGTAGTAGGCTaGAGCAGTGGCCGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSGVVVG*SSGRVQ
Trigger: CTGGACCCGGCCACTGCTGCAGCCTACTACCACCCC...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTTGCATCGCTGATGGGTaGAGTGGGGGCAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLCIADG*SGGREP
Trigger: CGGCTCCCTGCCCCCACTGCACCCATCAGCGATGCA...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGACCAGAGAGGTGCAGGTaGATCGCTGATGGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRPERCR*IADGCS
Trigger: ACTGCACCCATCAGCGATGCACCTGCACCTCTCTGG...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCCCAGAGAGGTGCAGGTaGATCGCTGATGGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGPERCR*IADGCS
Trigger: ACTGCACCCATCAGCGATGCACCTGCACCTCTCTGG...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGCCAGAGAGGTGCAGGTaGATCGCTGATGGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEPERCR*IADGCS
Trigger: ACTGCACCCATCAGCGATGCACCTGCACCTCTCTGG...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAAGCTCCTCGTCCATCTaGAGCCTCTCCGCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLSSSSI*SLSALR
Trigger: CCTCAGCGCGGAGAGGCTGCAGATGGACGAGGAGCT...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAATGGCCACGCAGCCCATaGAGCTCGGCCACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKWPRSP*SSATGR
Trigger: CCTGCCCGTGGCCGAGCTGCATGGGCTGCGTGGCCA...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCTGGCCACGCAGCCCATaGAGCTCGGCCACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFWPRSP*SSATGR
Trigger: CCTGCCCGTGGCCGAGCTGCATGGGCTGCGTGGCCA...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCTGCTCCGAGGGCTTaGCCCGCTCCTCAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIAAPRA*PAPQWH
Trigger: ATGCCACTGAGGAGCGGGGCAAGCCCTCGGAGCAGC...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTACGGGCTTGGGCGCCTaGAGGCCGGCATCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGTGLGA*RPASFS
Trigger: GCTGAAGGATGCCGGCCTGCAGGCGCCCAAGCCCGT...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGACGGGCTTGGGCGCCTaGAGGCCGGCATCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVTGLGA*RPASFS
Trigger: GCTGAAGGATGCCGGCCTGCAGGCGCCCAAGCCCGT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGCCGCAGCCGCCGCTaGCGCGCCAGCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWCRSRR*RASHFS
Trigger: GGAGAAGTGGCTGGCGCGGCAGCGGCGGCTGCGGCA...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACATGCTGCTCCAGCACCTaGTGCCGGAACTCGGACACC +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETCCSST*CRNSDT
Trigger: GGTGTCCGAGTTCCGGCAGCAGGTGCTGGAGCAGCA...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCGTGCTCTCCGGCCTGTaGTCTGCCTCCGCCGGCACC +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFVLSGL*SASAGT
Trigger: GGTGCCGGCGGAGGCAGAGCACAGGCCGGAGAGCAC...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCAGCCGGGTGGCTGTaGAGAGAGTGGCTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIAAGWL*REWLSA
Trigger: GGCCGAAAGCCACTCTCTGCACAGCCACCCGGCTGC...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTAGTTTGAGGGGCGGCTaGTCGGCCACGCAACGGAGG +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLSLRGG*SATQRR
Trigger: CCTCCGTTGCGTGGCCGAGCAGCCGCCCCTCAAACT...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAAAGGCGTCTGCCGCTTaGTCTGAATTGTTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRKASAA*SELLGA
Trigger: CGCCCCCAACAATTCAGAGCAAGCGGCAGACGCCTT...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACAAGGCGTCTGCCGCTTaGTCTGAATTGTTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNKASAA*SELLGA
Trigger: CGCCCCCAACAATTCAGAGCAAGCGGCAGACGCCTT...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGATGCTCTTCCCATTGGTaGTGTGGGACAGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRCSSHW*CGTAAQ
Trigger: CTGTGCCGCTGTCCCACAGCACCAATGGGAAGAGCA...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGAGGGCTCCCACGGCTTaGTCTTCCCATTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNERAPTA*SSHWCC
Trigger: ACAGCACCAATGGGAAGAGCAAGCCGTGGGAGCCCT...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAGCCACGCTCCCTTTATaGTTCTGCAGGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRATLPL*FCRAFW
Trigger: CCAGAAGGCCCTGCAGAAGCATAAAGGGAGCGTGGC...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTTCCTGCTGCCCATTGTaGTGGGGTGGAGGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGSCCPL*WGGGAR
Trigger: CCGCGCCCCTCCACCCCAGCACAATGGGCAGCAGGA...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGACGATCCCTTGCCACTTaGGCTTGGGGACTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRRSLAT*AWGLPP
Trigger: AGGAGGAAGTCCCCAAGCGCAAGTGGCAAGGGATCG...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACGGCCTCGATCCCTTaGCACTTGCGCTTGGGGACT +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCETASIP*HLRLGT
Trigger: AGTCCCCAAGCGCAAGTGGCAAGGGATCGAGGCCGT...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CCTGGGATATCCCTTCAGGTAGCCCCTAGGCCAGTGCATTGCAGGCAAGGCAAGCAATCCTACATTGGTTaGTCGCTGAATGACAACGGT +
Preference number: 4 (lower is better)
Translates to: PGISLQVAPRPVHCRQGKQSYIG*SLNDNG
Trigger: ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTG...CTTGCCTTGCCTGCAATGCACTGGCCTAGGGGCTACCTGAAGGGATATCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR GCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAACAGAGCTCTGTACATaGTCCCCACGGAGTAATAAA +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQTELCT*SPRSNK
Trigger: TTTATTACTCCGTGGGGAGCATGTACAGAGCTCTGT...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAGCAGGTGCGAGGGGATaGCTGGTCCCCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSAGARG*LVPLPS
Trigger: AGAAGGCAGGGGGACCAGCCATCCCCTCGCACCTGC...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCCCGCTGGAGGTTGAGTaGCGGGAAGCGGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLPLEVE*REAGIL
Trigger: CAGGATTCCCGCTTCCCGCCACTCAACCTCCAGCGG...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCCTCGGTCACGGTACTaGGGGGCACCACGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLPRSRY*GAPRGA
Trigger: TGCACCACGTGGTGCCCCCCAGTACCGTGACCGAGG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCACCTCGGTCACGGTACTaGGGGGCACCACGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSPRSRY*GAPRGA
Trigger: TGCACCACGTGGTGCCCCCCAGTACCGTGACCGAGG...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCATGCGGAGGTCGTCGGTaGTGTGGTAGGGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSCGGRR*CGRAGS
Trigger: GCTTCCGGCCCTACCACACCACCGACGACCTCCGCA...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGAGTAGGCTGCAGCAGTaGCCGGGTCCAGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVSRLQQ*PGPGRG
Trigger: CCCTCGGCCTGGACCCGGCCACTGCTGCAGCCTACT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTTGCCCCGCTCCTCAGTaGCATGGCCACGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSICPAPQ*HGHAAH
Trigger: ATGGGCTGCGTGGCCATGCCACTGAGGAGCGGGGCA...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAGGATGCAAGGGGTGTTaGACGGGCTTGGGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSGCKGC*TGLGAC
Trigger: GCAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCC...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTGGATGCAAGGGGTGTTaGACGGGCTTGGGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLGCKGC*TGLGAC
Trigger: GCAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCC...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAGGGCACCGTGTGGTGTaGGGTGGGCACCGGATGCAA +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSGHRVV*GGHRMQ
Trigger: TTGCATCCGGTGCCCACCCCACACCACACGGTGCCC...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCTCCTCATTGGTGCGCTaGATCAGCAGGGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGSSLVR*ISRAVA
Trigger: TGCCACAGCCCTGCTGATCCAGCGCACCAATGAGGA...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGTGGCTCGTGACGGTTTaGTCCTGGCCTGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQWLVTV*SWPGGA
Trigger: AGCACCACCAGGCCAGGACCAAACCGTCACGAGCCA...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAAGGGTCACGGCCACCTaGCTCGTGACGGTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLRVTAT*LVTVWS
Trigger: GGACCAAACCGTCACGAGCCAGGTGGCCGTGACCCT...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGCATGGAGCTGGGGCTTaGGCGAAATCAGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEHGAGA*AKSEVV
Trigger: CACCACCTCTGATTTCGCCCAAGCCCCAGCTCCATG...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCGGTGCAGCATGGAGCTaGGGCTTGGGCGAAATCAGA +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGGAAWS*GLGEIR
Trigger: TCTGATTTCGCCCAAGCCCCAGCTCCATGCTGCACC...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAGCCGTGGGTGCAGCATaGAGCTGGGGCTTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSAVGAA*SWGLGE
Trigger: TTCGCCCAAGCCCCAGCTCCATGCTGCACCCACGGC...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAGGTTCCAGAGGGCCGTaGGTGCAGCATGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSGSRGP*VQHGAG
Trigger: CCCAGCTCCATGCTGCACCCACGGCCCTCTGGAACC...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTTGGCTGTGCAGAGAGTaGCTTTCGGCCCGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIWLCRE*LSARRV
Trigger: GACGCGGCGGGCCGAAAGCCACTCTCTGCACAGCCA...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCCCTCCCTCTCGTGGTaGCGGCGGAGGTGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVPSLSW*RRRWLV
Trigger: TACCAGCCACCTCCGCCGCCACCACGAGAGGGAGGG...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAACCGGGCAGGAAGGGCTaGTGCTCCAGGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKPGRKG*CSRLPP
Trigger: GGGAGGGAGCCTGGAGCACCAGCCCTTCCTGCCCGG...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCTGGCCCAGGATGGTCTaGGTGGACTTCTCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGWPRMV*VDFSSS
Trigger: TGAGCTCGAGAAGTCCACCCAGACCATCCTGGGCCA...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTGCCACGCAACGGAGGTaGGCCCTGACCTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLATQRR*ALTSSS
Trigger: TGAGGAGGAGGTCAGGGCCCACCTCCGTTGCGTGGC...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCCACGCAACGGAGGTaGGCCCTGACCTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIATQRR*ALTSSS
Trigger: TGAGGAGGAGGTCAGGGCCCACCTCCGTTGCGTGGC...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGAGGCTCCGCGGCCTTTaGGATGTCAGACAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNERLRGL*DVRQGS
Trigger: GCTTCCTTGTCTGACATCCCAAAGGCCGCGGAGCCT...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAACTCTCGACAGCTCCTaGGGCCGGACCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLTLDSS*GRTCSS
Trigger: GCTGGAACAGGTCCGGCCCCAGGAGCTGTCGAGAGT...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACATGGCCTTCTCCCCGCTaGCAGGAGCTAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETWPSPR*QELAPG
Trigger: TCCAGGAGCTAGCTCCTGCCAGCGGGGAGAAGGCCA...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCGCTTGCTCTTCCCATTaGTGCTGTGGGACAGCGGCA +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGACSSH*CCGTAA
Trigger: TGCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGC...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGTGGAGGGGCGCGGCTaGAGGACTGCAGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIVEGRG*RTAAQE
Trigger: TTCCTGAGCTGCAGTCCTCCAGCCGCGCCCCTCCAC...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAAACTCCGCCACGCTGTaGGAGAGCTGCTCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLNSATL*ESCSAV
Trigger: GACGGCAGAGCAGCTCTCCCACAGCGTGGCGGAGTT...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAAACCATCTTCTGTTTCTaGCTCCTCAACTCCGCCACG +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQTIFCF*LLNSAT
Trigger: CGTGGCGGAGTTGAGGAGCCAGAAACAGAAGATGGT...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGATCTGGTGAGGGCCCTTaGGAGCAAGAGAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRSGEGP*EQERPS
Trigger: AGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGA...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAACTTGTGGTGGATCCCTaGCATTTTCTACACTTGTGT +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQLVVDP*HFLHLC
Trigger: ACACAAGTGTAGAAAATGCCAGGGATCCACCACAAG...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCACCCATCGCCACGCTGTaGGAGAGCTGCTCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSPIATL*ESCSAV
Trigger: GACGGCAGAGCAGCTCTCCCACAGCGTGGCGATGGG...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR TCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCCGGGCCGCTGGAGGTTaGGTGGCGGGAAGCGGGAAT +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICRAAGG*VAGSGN
Trigger: ATTCCCGCTTCCCGCCACTCAACCTCCAGCGGCCCG...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR TCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGCGGGCCGCTGGAGGTTaGGTGGCGGGAAGCGGGAAT +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWRAAGG*VAGSGN
Trigger: ATTCCCGCTTCCCGCCACTCAACCTCCAGCGGCCCG...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR TCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGCAGCCTCTCCGCGCTaGGGCCAGACATGCGCTCCG +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCAASPR*GQTCAP
Trigger: CGGAGCGCATGTCTGGCCTCAGCGCGGAGAGGCTGC...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAAGCTCTGCCGTCAGGCTaGGGCTGTAGTGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKALPSG*GCSAGP
Trigger: AGGCCCGGCACTACAGCCTCAGCCTGACGGCAGAGC...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR TCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAACCTTTTGATGCTCTCTaGATACTCTTAAGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQPFDAL*ILLRVQ
Trigger: TTGCACCCTTAAGAGTATTCAGAGAGCATCAAAAGG...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAATTTTCTACACTTGTGTaGAACATGTGGCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQFSTLV*NMWLRE
Trigger: TTCCCTGAGCCACATGTTTCACACAAGTGTAGAAAA...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAAAACTGCCCCCAGAGTaGCCGAGGCACCGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSKLPPE*PRHRCS
Trigger: GGAACACCGGTGCCTCGGTCACTCTGGGGGCAGTTT...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTAAACTGCCCCCAGAGTaGCCGAGGCACCGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLKLPPE*PRHRCS
Trigger: GGAACACCGGTGCCTCGGTCACTCTGGGGGCAGTTT...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTGGCTCATGCCTTTCATaGCAGGGCCCCGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLGSCLS*QGPAAP
Trigger: TGGAGCTGCGGGGCCCTGGCATGAAAGGCATGAGCC...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR GCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCGCACGCGCTTGGGTGTaGTGGCGGGGGAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICARAWV*WRGSCG
Trigger: ACCACAGCTCCCCCGCCAGCACACCCAAGCGCGTGC...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR GCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGGATGGCTGGTCCCCCTaGCTTCTCCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVDGWSP*LLLRER
Trigger: CCGCTCCCTCAGGAGAAGGCAGGGGGACCAGCCATC...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR GCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGGGAAGCGGGAATCCTaGACAACTGAGCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLGKRES*TTELGE
Trigger: CTCCCCCAGCTCAGTTGTGCAGGATTCCCGCTTCCC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR GCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGGGGGCACCACGTGGTaGACGGGCCGCTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVGGTTW*TGRWRL
Trigger: CAACCTCCAGCGGCCCGTGCACCACGTGGTGCCCCC...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCACGGACCCCAGAGAGGTaGAGGTGCATCGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSRTPER*RCIADG
Trigger: CCCATCAGCGATGCACCTGCACCTCTCTGGGGTCCG...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGACATGCGCTCCGAGTaGAGCGCTGCCAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIDMRSE*SAARDE
Trigger: CTCATCCCTGGCAGCGCTGCACTCGGAGCGCATGTC...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCGGGGTGGGCACCGGATaGAAGGGGTGTTGGACGGGC +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICGVGTG*KGCWTG
Trigger: GCCCGTCCAACACCCCTTGCATCCGGTGCCCACCCC...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGTCTCCTCCTCATTGGTaGGCTGGATCAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQSPPHW*AGSAGL
Trigger: CAGCCCTGCTGATCCAGCGCACCAATGAGGAGGAGA...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCCGTGGCCCCTCCTCTaGTTTCTCCGGGCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLPWPLL*FLRAED
Trigger: GTCTTCTGCCCGGAGAAAGCAGAGGAGGGGCCACGG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTAGTTTGAGGGGCGGCTaGTCGGCCACGCAACGGAGG +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGSLRGG*SATQRR
Trigger: CCTCCGTTGCGTGGCCGAGCAGCCGCCCCTCAAACT...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGCGATCCCTTGCCACTTaGGCTTGGGGACTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQRSLAT*AWGLPP
Trigger: AGGAGGAAGTCCCCAAGCGCAAGTGGCAAGGGATCG...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CAAGGCACTTTCGTAAGTGGTCCAGTTCTGCCTGGAGCCGCTCCCTTTCTGAGATGTGTCTGTAACACCTaGCGCTCCAGATTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QGTFVSGPVLPGAAPFLRCVCNT*RSRFCS
Trigger: AGAGCAAAATCTGGAGCGGCAGGTGTTACAGACACA...TCTCAGAAAGGGAGCGGCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR GCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGTGGGAGAGCTGCTCTaGCGTCAGGCTGAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLVGELL*RQAEAV
Trigger: TACAGCCTCAGCCTGACGGCAGAGCAGCTCTCCCAC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAGCCAGCAAGCTGTTCTaGGCAGCAAGGGCTAGGGCC +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSASKLF*AARARA
Trigger: GGCCCTAGCCCTTGCTGCGCAGAACAGCTTGCTGGC...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACATTTCGAGGGGAGGCCTaGAGCACAGCCCCTCGAGTT +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETFRGEA*STAPRV
Trigger: AACTCGAGGGGCTGTGCTGCAGGCCTCCCCTCGAAA...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCTCACAGCATCTAAACTaGCCCCAGAGTGACCGAGGC +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGSQHLN*PQSDRG
Trigger: GCCTCGGTCACTCTGGGGGCAGTTTAGATGCTGTGA...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAATGGTCCTGGTCGCGGTaGAAAGCATCCCTAGCGAAG +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCEWSWSR*KASLAK
Trigger: CTTCGCTAGGGATGCTTTCCACCGCGACCAGGACCA...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR CCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTCGGTGGCGGTGGTCCTaGTCGCGGTGGAAAGCATCC +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGRWRWS*SRWKAS
Trigger: GGATGCTTTCCACCGCGACCAGGACCACCGCCACCG...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR CCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCGGGAGCTGTGGTTGGTaGCCGGAGAGGACACGGGGG +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFGSCGW*PERTRG
Trigger: CCCCCGTGTCCTCTCCGGCCACCAACCACAGCTCCC...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGAGTAGGCTGCAGCAGTaGCCGGGTCCAGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWSRLQQ*PGPGRG
Trigger: CCCTCGGCCTGGACCCGGCCACTGCTGCAGCCTACT...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTAGGGTCACGGCCACCTaGCTCGTGACGGTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIRVTAT*LVTVWS
Trigger: GGACCAAACCGTCACGAGCCAGGTGGCCGTGACCCT...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAAGGGTCACGGCCACCTaGCTCGTGACGGTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSRVTAT*LVTVWS
Trigger: GGACCAAACCGTCACGAGCCAGGTGGCCGTGACCCT...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGGGTGCAGCATGGAGCTaGGGCTTGGGCGAAATCAGA +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQGAAWS*GLGEIR
Trigger: TCTGATTTCGCCCAAGCCCCAGCTCCATGCTGCACC...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCCGGCTGCCTGGCGGCTaGGCTCAAATGCAGCCGGGT +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFRLPGG*AQMQPG
Trigger: ACCCGGCTGCATTTGAGCCCAGCCGCCAGGCAGCCG...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCCGGCTGCCTGGCGGCTaGGCTCAAATGCAGCCGGGT +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICRLPGG*AQMQPG
Trigger: ACCCGGCTGCATTTGAGCCCAGCCGCCAGGCAGCCG...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCCCCTCCCTCTCGTGGTaGCGGCGGAGGTGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFPSLSW*RRRWLV
Trigger: TACCAGCCACCTCCGCCGCCACCACGAGAGGGAGGG...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATCCGGGCAGGAAGGGCTaGTGCTCCAGGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNPGRKG*CSRLPP
Trigger: GGGAGGGAGCCTGGAGCACCAGCCCTTCCTGCCCGG...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGAGGGAGGCCCGCTGCTaGCCCAGGATGGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWREARC*PRMVWV
Trigger: CACCCAGACCATCCTGGGCCAGCAGCGGGCCTCCCT...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGGAGAGGCTTGCTGCGTaGCTGGTTCACTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQERLAA*LVHSGR
Trigger: TCTCCCTGAGTGAACCAGCCACGCAGCAAGCCTCTC...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR CCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTACTCTCGACAGCTCCTaGGGCCGGACCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLTLDSS*GRTCSS
Trigger: GCTGGAACAGGTCCGGCCCCAGGAGCTGTCGAGAGT...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAACTCTCGACAGCTCCTaGGGCCGGACCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSTLDSS*GRTCSS
Trigger: GCTGGAACAGGTCCGGCCCCAGGAGCTGTCGAGAGT...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGCAGGAGCTAGCTCCTaGACTCTCGACAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLAGASS*TLDSSW
Trigger: CCAGGAGCTGTCGAGAGTCCAGGAGCTAGCTCCTGC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTTGGCCTTCTCCCCGCTaGCAGGAGCTAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIWPSPR*QELAPG
Trigger: TCCAGGAGCTAGCTCCTGCCAGCGGGGAGAAGGCCA...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCCCCATTGTGCTGGGGTaGAGGGGCGCGGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICPIVLG*RGAAGG
Trigger: TCCTCCAGCCGCGCCCCTCCACCCCAGCACAATGGG...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCCCCATTGTGCTGGGGTaGAGGGGCGCGGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFPIVLG*RGAAGG
Trigger: TCCTCCAGCCGCGCCCCTCCACCCCAGCACAATGGG...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAATGCTGCCCATTGTGCTaGGGTGGAGGGGCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKCCPLC*GGGARL
Trigger: CAGCCGCGCCCCTCCACCCCAGCACAATGGGCAGCA...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGACACTGCTCCCACCCTaGGCAGACCTCTCATGGTGT +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQTLLPP*ADLSWC
Trigger: ACACCATGAGAGGTCTGCCCAGGGTGGGAGCAGTGT...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAAGGATGGGGAGACAGTaGGCAAGAAGCTCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCERMGRQ*ARSSRA
Trigger: GGCCCTTGAGCTTCTTGCCCACTGTCTCCCCATCCT...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAGAAAGGGGTAGGATCTaGTGTGAAATTCAGCTTAAC +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQERGRI*CEIQLN
Trigger: GTTAAGCTGAATTTCACACCAGATCCTACCCCTTTC...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGCCGAGGGGAGGCAGTaGGGACATGCGGAGGTCGTC +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVAEGRQ*GHAEVV
Trigger: GACGACCTCCGCATGTCCTCACTGCCTCCCCTCGGC...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCATGCCATGGTTGGAGATaGGGCTGGGCACCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSCHGWR*GWAPCG
Trigger: ACCACACGGTGCCCAGCCTCATCTCCAACCATGGCA...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCGGAACTCGGACACCTaGGACTGCCGGTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVRNSDT*DCRSSF
Trigger: GAAGGAGGACCGGCAGTCTCAGGTGTCCGAGTTCCG...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTCCAGGTCCAGCTTGCTaGCCAGCCTCCGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCPGPAC*PASGAA
Trigger: AGCAGCGCCGGAGGCTGGTCAGCAAGCTGGACCTGG...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGCCAGGTCCAGCTTGCTaGCCAGCCTCCGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWPGPAC*PASGAA
Trigger: AGCAGCGCCGGAGGCTGGTCAGCAAGCTGGACCTGG...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGAACGGAGGTGGGCCCTaGCCTCCTCCTCATCGCTCT +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVNGGGP*PPPHRS
Trigger: AGAGCGATGAGGAGGAGGTCAGGGCCCACCTCCGTT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTAACGGAGGTGGGCCCTaGCCTCCTCCTCATCGCTCT +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGNGGGP*PPPHRS
Trigger: AGAGCGATGAGGAGGAGGTCAGGGCCCACCTCCGTT...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCAGGACGTGTCCAGTTTaGGGGGCGGCTGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICRTCPV*GAAARP
Trigger: TGGCCGAGCAGCCGCCCCTCAAACTGGACACGTCCT...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGAGGACGTGTCCAGTTTaGGGGGCGGCTGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWRTCPV*GAAARP
Trigger: TGGCCGAGCAGCCGCCCCTCAAACTGGACACGTCCT...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGGTCTGCCGCTTGCTCTaGATTGTTGGGGGCGACGGG +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVVCRLL*IVGGDG
Trigger: CCCGTCGCCCCCAACAATTCAGAGCAAGCGGCAGAC...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAGGTGGACTGCAGCACTaGCTCGTGGAACTGATGTGC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLGGLQH*LVELMC
Trigger: GCACATCAGTTCCACGAGTCAGTGCTGCAGTCCACC...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGGAGCCGCTCCCTTTCTaGGACCATCTTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEEPLPF*DHLLFL
Trigger: CAGAAACAGAAGATGGTCTCAGAAAGGGAGCGGCTC...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp CCTGGGATATCCCTTCAGGTAGCCCCTAGGCCAGTGCATTGCAGGCAAGGCAAGGTGATTCAATTGCATTaGCGTCAAGGTGAGTTCATT +
Preference number: 4 (lower is better)
Translates to: PGISLQVAPRPVHCRQGKVIQLH*RQGEFI
Trigger: AATGAACTCACCTTGACGTCAATGCAATTGAATCAC...CTTGCCTTGCCTGCAATGCACTGGCCTAGGGGCTACCTGAAGGGATATCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGACTCCTGGGGAGGAATaGGACTGGCCCCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVTPGEE*DWPHRC
Trigger: GCAGCGATGGGGCCAGTCTCATTCCTCCCCAGGAGT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAAAGTGGGGTTTCCACTaGCAGGGGAGAAGCCAACTA +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRKWGFH*QGRSQL
Trigger: TAGTTGGCTTCTCCCCTGTCAGTGGAAACCCCACTT...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGAAACTGCCCCCAGAGTaGCCGAGGCACCGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVKLPPE*PRHRCS
Trigger: GGAACACCGGTGCCTCGGTCACTCTGGGGGCAGTTT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCCCCGACCTCCACTGCTaGTCCTGGAGCCGGCATCCT +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICPDLHC*SWSRHP
Trigger: AGGATGCCGGCTCCAGGAGCAGCAGTGGAGGTCGGG...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR GCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGGTTCCCGACCTCCACTaGTGCTCCTGGAGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVVPDLH*CSWSRH
Trigger: ATGCCGGCTCCAGGAGCAGCAGTGGAGGTCGGGAAC...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR GCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAGGGAAGCGGGAATCCTaGACAACTGAGCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSGKRES*TTELGE
Trigger: CTCCCCCAGCTCAGTTGTGCAGGATTCCCGCTTCCC...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTCGGACCCCAGAGAGGTaGAGGTGCATCGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGRTPER*RCIADG
Trigger: CCCATCAGCGATGCACCTGCACCTCTCTGGGGTCCG...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGTGCTGCTCCAGCACCTaGTGCCGGAACTCGGACACC +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVCCSST*CRNSDT
Trigger: GGTGTCCGAGTTCCGGCAGCAGGTGCTGGAGCAGCA...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTTGCTGCTCCAGCACCTaGTGCCGGAACTCGGACACC +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGCCSST*CRNSDT
Trigger: GGTGTCCGAGTTCCGGCAGCAGGTGCTGGAGCAGCA...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCGTCCTGGCCTGGTGGTaGTCTCCGGCCTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFVLAWW*SPACAL
Trigger: CAGAGCACAGGCCGGAGAGCACCACCAGGCCAGGAC...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCGCAGCCGGGTGGCTGTaGAGAGAGTGGCTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICAAGWL*REWLSA
Trigger: GGCCGAAAGCCACTCTCTGCACAGCCACCCGGCTGC...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCGCGGCTGGGCTCAAATaGAGCCGGGTGGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFAAGLK*SRVAVQ
Trigger: CTGCACAGCCACCCGGCTGCATTTGAGCCCAGCCGC...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACGCTGACAGTGCCTTCTaGTTCATGGCACGGAGCATT +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNADSAF*FMARSI
Trigger: AATGCTCCGTGCCATGAAGCAGAAGGCACTGTCAGC...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR GCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGGCTGACAGTGCCTTCTaGTTCATGGCACGGAGCATT +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEADSAF*FMARSI
Trigger: AATGCTCCGTGCCATGAAGCAGAAGGCACTGTCAGC...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR GCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCGCTGACAGTGCCTTCTaGTTCATGGCACGGAGCATT +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGADSAF*FMARSI
Trigger: AATGCTCCGTGCCATGAAGCAGAAGGCACTGTCAGC...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR GCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAATGCTCAGACTCTTTTTaGCTCCAGGGGCCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCECSDSF*LQGPRS
Trigger: TGAGCGAGGCCCCTGGAGGCAAAAAGAGTCTGAGCA...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGTGCTCAGACTCTTTTTaGCTCCAGGGGCCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQCSDSF*LQGPRS
Trigger: TGAGCGAGGCCCCTGGAGGCAAAAAGAGTCTGAGCA...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTATGCTCTTCCCATTGGTaGTGTGGGACAGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLCSSHW*CGTAAQ
Trigger: CTGTGCCGCTGTCCCACAGCACCAATGGGAAGAGCA...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAGCCTTCTGGGTGGACTaGAGCACTGACTCGTGGAAC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLAFWVD*STDSWN
Trigger: GTTCCACGAGTCAGTGCTGCAGTCCACCCAGAAGGC...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTACGGCCTCGATCCCTTaGCACTTGCGCTTGGGGACT +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSITASIP*HLRLGT
Trigger: AGTCCCCAAGCGCAAGTGGCAAGGGATCGAGGCCGT...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp TTTCGTAAGTGGTCCAGTTCTGCCTGGAGCCGCTCCCTTTCTGAGACCATCTTCGAGCCTGGAATCCTTTaGTTCATGCATGGCACATTC +
Preference number: 4 (lower is better)
Translates to: FRKWSSSAWSRSLSETIFEPGIL*FMHGTF
Trigger: GAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTC...GAAGATGGTCTCAGAAAGGGAGCGGCTCCAGGCAGAACTGGACCACTTACGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR GCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCATTAGCTTGTCCAGATaGTGGGGGCAGGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLISLSR*WGQAGG
Trigger: TCCCCCTGCCTGCCCCCAGCATCTGGACAAGCTAAT...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTCGACACGATGCCAGCTaGCAGCAAGCTGTTCTGCGC +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIRHDAS*QQAVLR
Trigger: GCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCG...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAAGACCTCTCATGGTGTaGCACCTGTCCCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLRPLMV*HLSPVL
Trigger: CAGCACAGGGGACAGGTGGCACACCATGAGAGGTCT...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACACCGAGGGCTTTCAGGTaGATCCTGACACACAGGTGG +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETPRAFR*ILTHRW
Trigger: CCACCTGTGTGTCAGGATGCACCTGAAAGCCCTCGG...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAATGGAAGGTATCCCTCTaGAGAGGGACAGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCEWKVSL*RGTDGS
Trigger: GCTGCCATCTGTCCCTCTGCAGAGGGATACCTTCCA...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAATCACAGCATCTAAACTaGCCCCAGAGTGACCGAGGC +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCESQHLN*PQSDRG
Trigger: GCCTCGGTCACTCTGGGGGCAGTTTAGATGCTGTGA...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTCGGGGGACGACTCGCTaGTCAGTGAGGACCCTGCGG +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCRGTTR*SVRTLR
Trigger: CCGCAGGGTCCTCACTGAGCAGCGAGTCGTCCCCCG...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405402.6
CDS-3UTR CCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGCTAGCGAAGGGGACTTaGGCTCATGGCTCATGCCTT +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQLAKGT*AHGSCL
Trigger: AAGGCATGAGCCATGAGCCCAAGTCCCCTTCGCTAG...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR CCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTTCAGTGAGGACCCTCTaGGCTCCTCCGCCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSISVRTL*APPPVW
Trigger: CCAAACAGGCGGAGGAGCCCAGAGGGTCCTCACTGA...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR CCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGGGAGCTGTGGTTGGTaGCCGGAGAGGACACGGGGG +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWGSCGW*PERTRG
Trigger: CCCCCGTGTCCTCTCCGGCCACCAACCACAGCTCCC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCCTGCACAACTGAGCTaGGGGAGAGGCCGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVPAQLS*GRGRRG
Trigger: ACCCCTTCGGCCTCTCCCCCAGCTCAGTTGTGCAGG...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAATGGTGCACGGGCCGCTaGAGGTTGAGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKWCTGR*RLSGGK
Trigger: CTTCCCGCCACTCAACCTCCAGCGGCCCGTGCACCA...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGTGGTGCACGGGCCGCTaGAGGTTGAGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWWCTGR*RLSGGK
Trigger: CTTCCCGCCACTCAACCTCCAGCGGCCCGTGCACCA...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGCGCTCCTCAGTGGCATaGCCACGCAGCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWRSSVA*PRSPCS
Trigger: GCTGCATGGGCTGCGTGGCCATGCCACTGAGGAGCG...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGGTGTTGGACGGGCTTaGGCGCCTGCAGGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCGVGRA*APAGRH
Trigger: ATGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACC...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCGGGCACCGTGTGGTGTaGGGTGGGCACCGGATGCAA +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFGHRVV*GGHRMQ
Trigger: TTGCATCCGGTGCCCACCCCACACCACACGGTGCCC...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGTTGGTCCTGGCCTGGTaGTGCTCTCCGGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVLVLAW*CSPACA
Trigger: AGCACAGGCCGGAGAGCACCACCAGGCCAGGACCAA...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGGTTTGGTCCTGGCCTaGTGGTGCTCTCCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGGLVLA*WCSPAC
Trigger: ACAGGCCGGAGAGCACCACCAGGCCAGGACCAAACC...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGAGGGTCACGGCCACCTaGCTCGTGACGGTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVRVTAT*LVTVWS
Trigger: GGACCAAACCGTCACGAGCCAGGTGGCCGTGACCCT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCTGGCTGTGCAGAGAGTaGCTTTCGGCCCGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICWLCRE*LSARRV
Trigger: GACGCGGCGGGCCGAAAGCCACTCTCTGCACAGCCA...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGAGCGGCACGGCTGCCTaGCGGCTGGGCTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWSGTAA*RLGSNA
Trigger: TGCATTTGAGCCCAGCCGCCAGGCAGCCGTGCCGCT...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGGGCGGCGGAGGTGGCTaGTACTTGTCCAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWGGGGG*YLSRGA
Trigger: TGCCCCTCTGGACAAGTACCAGCCACCTCCGCCGCC...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTACCAGGATGGTCTGGGTaGACTTCTCGAGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLPGWSG*TSRAQP
Trigger: TGGCTGAGCTCGAGAAGTCCACCCAGACCATCCTGG...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCCCAGGATGGTCTGGGTaGACTTCTCGAGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLPGWSG*TSRAQP
Trigger: TGGCTGAGCTCGAGAAGTCCACCCAGACCATCCTGG...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTAGGGAGGCCCGCTGCTaGCCCAGGATGGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCREARC*PRMVWV
Trigger: CACCCAGACCATCCTGGGCCAGCAGCGGGCCTCCCT...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAAGCCACGCAACGGAGGTaGGCCCTGACCTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKATQRR*ALTSSS
Trigger: TGAGGAGGAGGTCAGGGCCCACCTCCGTTGCGTGGC...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTACGCTTCCTCCGCTTCTaGGCCACCAATTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLRFLRF*ATNSSF
Trigger: GAAGGAGGAATTGGTGGCCCAGAAGCGGAGGAAGCG...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAAGGCTCCGCGGCCTTTaGGATGTCAGACAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLRLRGL*DVRQGS
Trigger: GCTTCCTTGTCTGACATCCCAAAGGCCGCGGAGCCT...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAGCAGGAGCTAGCTCCTaGACTCTCGACAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSAGASS*TLDSSW
Trigger: CCAGGAGCTGTCGAGAGTCCAGGAGCTAGCTCCTGC...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAATTCCCATTGGTGCTGTaGGACAGCGGCACAGGAATG +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCEFPLVL*DSGTGM
Trigger: CATTCCTGTGCCGCTGTCCCACAGCACCAATGGGAA...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGCTTGCTCTTCCCATTaGTGCTGTGGGACAGCGGCA +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLACSSH*CCGTAA
Trigger: TGCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTGCAGGGCCTTCTGGGTaGACTGCAGCACTGACTCGT +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLAGPSG*TAALTR
Trigger: ACGAGTCAGTGCTGCAGTCCACCCAGAAGGCCCTGC...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCAGGGCCTTCTGGGTaGACTGCAGCACTGACTCGT +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIAGPSG*TAALTR
Trigger: ACGAGTCAGTGCTGCAGTCCACCCAGAAGGCCCTGC...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGGACGTGTCAACCTTGTaGTTCTGCTCTGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEDVSTL*FCSADS
Trigger: GCTGTCTGCAGAGCAGAACCACAAGGTTGACACGTC...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACAGGGAAACCGTCACCTaGGATATCCCTTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNRETVT*DIPSGS
Trigger: GCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCT...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCAGCAAGTTTCACTCCTaGGGAGGAATGAGACTGGCC +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGSKFHS*GGMRLA
Trigger: GGCCAGTCTCATTCCTCCCCAGGAGTGAAACTTGCT...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAAGGATGGGGAGACAGTaGGCAAGAAGCTCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETRMGRQ*ARSSRA
Trigger: GGCCCTTGAGCTTCTTGCCCACTGTCTCCCCATCCT...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAACTGGGTACTGTGTCTTaGGTGGTGTGCTTTCGTTTT +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQLGTVS*VVCFRF
Trigger: AAAACGAAAGCACACCACCCAAGACACAGTACCCAG...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCTGGGGAAACCATGACTaGGTACTGTGTCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGWGNHD*VLCLGW
Trigger: CCACCCAAGACACAGTACCCAGTCATGGTTTCCCCA...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR CAA 72 bp GACTGGCCCCATCGCTGCGGCAAAAGCAAACTGGGCTaGAGGCATAGTAACATGGCAACACAAGAAAGAACA +
Preference number: 4 (lower is better)
Translates to: DWPHRCGKSKLG*RHSNMATQERT
Trigger: TGTTCTTTCTTGTGTTGCCATGTTACTATGCCTCAAGCCCAGTTTGCTTTTGCCGCAGCGATGGGGCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGAGGAGTCGTCCATCCTaGAGGCCGGGTGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWRSRPS*RPGGGR
Trigger: CCTTCCCCCACCCGGCCTTCAGGATGGACGACTCCT...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTAGGAGTCGTCCATCCTaGAGGCCGGGTGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCRSRPS*RPGGGR
Trigger: CCTTCCCCCACCCGGCCTTCAGGATGGACGACTCCT...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCCGGAACTCGGACACCTaGGACTGCCGGTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFRNSDT*DCRSSF
Trigger: GAAGGAGGACCGGCAGTCTCAGGTGTCCGAGTTCCG...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAACGGAACTCGGACACCTaGGACTGCCGGTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKRNSDT*DCRSSF
Trigger: GAAGGAGGACCGGCAGTCTCAGGTGTCCGAGTTCCG...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCAACGGAGGTGGGCCCTaGCCTCCTCCTCATCGCTCT +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICNGGGP*PPPHRS
Trigger: AGAGCGATGAGGAGGAGGTCAGGGCCCACCTCCGTT...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTCAGCGCCAGTCTCGGTaGAGGCGTCTGCCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCQRQSR*RRLPLA
Trigger: AGCAAGCGGCAGACGCCTTCACCGAGACTGGCGCTG...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAAAAAGCAAACTGGGCTTaGGGCATAGTAACATGGCAA +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQKANWA*GIVTWQ
Trigger: TTGCCATGTTACTATGCCTCAAGCCCAGTTTGCTTT...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCCCCAACCTTTTCAGCTaGAGCAAGTTTCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGPNLFS*SKFHSW
Trigger: CCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGG...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGTGCTGGTCACAGCAGTaGGCAGCCGGCACACAGGTC +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWCWSQQ*AAGTQV
Trigger: GACCTGTGTGCCGGCTGCTCACTGCTGTGACCAGCA...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACGAGGAAGGTGCTTGTTaGCTGCTGATAATACTGGCG +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNEEGAC*LLIILA
Trigger: CGCCAGTATTATCAGCAGTCAACAAGCACCTTCCTC...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGGTAGCAGACTCCCTCTaGACACCTGTGGAACATGCT +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQVADSL*TPVEHA
Trigger: AGCATGTTCCACAGGTGTTCAGAGGGAGTCTGCTAC...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCAGAATCCTTCACTGCTaGAGGTGTGGGCTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGRILHC*RCGLLL
Trigger: CAAAAGGAGCCCACACCTTCAGCAGTGAAGGATTCT...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAGCTCCTCAACTCATTTaGAAATGTCCCGGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSAPQLI*KCPGRA
Trigger: CGCCCGGCCGGGACATTTTCAAATGAGTTGAGGAGC...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR GCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATCCCGACCTCCACTGCTaGTCCTGGAGCCGGCATCCT +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNPDLHC*SWSRHP
Trigger: AGGATGCCGGCTCCAGGAGCAGCAGTGGAGGTCGGG...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR GCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTCCCGACCTCCACTGCTaGTCCTGGAGCCGGCATCCT +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCPDLHC*SWSRHP
Trigger: AGGATGCCGGCTCCAGGAGCAGCAGTGGAGGTCGGG...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR GCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATGATGGCTGGTCCCCCTaGCTTCTCCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNDGWSP*LLLRER
Trigger: CCGCTCCCTCAGGAGAAGGCAGGGGGACCAGCCATC...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR GCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGCATCGCTGATGGGTaGAGTGGGGGCAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWCIADG*SGGREP
Trigger: CGGCTCCCTGCCCCCACTGCACCCATCAGCGATGCA...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAACGGACCCCAGAGAGGTaGAGGTGCATCGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKRTPER*RCIADG
Trigger: CCCATCAGCGATGCACCTGCACCTCTCTGGGGTCCG...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCGACATGCGCTCCGAGTaGAGCGCTGCCAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICDMRSE*SAARDE
Trigger: CTCATCCCTGGCAGCGCTGCACTCGGAGCGCATGTC...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAAAGCTCCTCGTCCATCTaGAGCCTCTCCGCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKSSSSI*SLSALR
Trigger: CCTCAGCGCGGAGAGGCTGCAGATGGACGAGGAGCT...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATGCTGCTCCGAGGGCTTaGCCCGCTCCTCAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNAAPRA*PAPQWH
Trigger: ATGCCACTGAGGAGCGGGGCAAGCCCTCGGAGCAGC...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGCTGCTCCGAGGGCTTaGCCCGCTCCTCAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWAAPRA*PAPQWH
Trigger: ATGCCACTGAGGAGCGGGGCAAGCCCTCGGAGCAGC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTTCTCCTCCTCATTGGTaGGCTGGATCAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSISPPHW*AGSAGL
Trigger: CAGCCCTGCTGATCCAGCGCACCAATGAGGAGGAGA...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCTGCTGCTCCAGCACCTaGTGCCGGAACTCGGACACC +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFCCSST*CRNSDT
Trigger: GGTGTCCGAGTTCCGGCAGCAGGTGCTGGAGCAGCA...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCCGGCCCATATCCAGGTaGTGCTCCAGCACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFRPISR*CSSTCC
Trigger: GCAGCAGGTGCTGGAGCAGCACCTGGATATGGGCCG...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCCCGTGGCCCCTCCTCTaGTTTCTCCGGGCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICPWPLL*FLRAED
Trigger: GTCTTCTGCCCGGAGAAAGCAGAGGAGGGGCCACGG...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAACCGTGGCCCCTCCTCTaGTTTCTCCGGGCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKPWPLL*FLRAED
Trigger: GTCTTCTGCCCGGAGAAAGCAGAGGAGGGGCCACGG...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAAAGGCGTCTGCCGCTTaGTCTGAATTGTTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSKASAA*SELLGA
Trigger: CGCCCCCAACAATTCAGAGCAAGCGGCAGACGCCTT...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTAAGGCGTCTGCCGCTTaGTCTGAATTGTTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLKASAA*SELLGA
Trigger: CGCCCCCAACAATTCAGAGCAAGCGGCAGACGCCTT...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAACATCCAGAGAGGCTTaGTGCGTGGCTGGTTCACTC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLTSREA*CVAGSL
Trigger: GAGTGAACCAGCCACGCAGCAAGCCTCTCTGGATGT...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR GCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCACATCCAGAGAGGCTTaGTGCGTGGCTGGTTCACTC +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLTSREA*CVAGSL
Trigger: GAGTGAACCAGCCACGCAGCAAGCCTCTCTGGATGT...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR GCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCATGCTCTTCCCATTGGTaGTGTGGGACAGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSCSSHW*CGTAAQ
Trigger: CTGTGCCGCTGTCCCACAGCACCAATGGGAAGAGCA...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTAGGGCTCCCACGGCTTaGTCTTCCCATTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIRAPTA*SSHWCC
Trigger: ACAGCACCAATGGGAAGAGCAAGCCGTGGGAGCCCT...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGATGTGCAAACTCTTCTaGCACAAAGGGCTCCCACGG +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQMCKLF*HKGLPR
Trigger: CCGTGGGAGCCCTTTGTGGCAGAAGAGTTTGCACAT...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAGCCTTCTGGGTGGACTaGAGCACTGACTCGTGGAAC +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSAFWVD*STDSWN
Trigger: GTTCCACGAGTCAGTGCTGCAGTCCACCCAGAAGGC...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAGCCTTCTGGGTGGACTaGAGCACTGACTCGTGGAAC +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSAFWVD*STDSWN
Trigger: GTTCCACGAGTCAGTGCTGCAGTCCACCCAGAAGGC...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAGCCACGCTCCCTTTATaGTTCTGCAGGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSATLPL*FCRAFW
Trigger: CCAGAAGGCCCTGCAGAAGCATAAAGGGAGCGTGGC...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCACGATCCCTTGCCACTTaGGCTTGGGGACTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSRSLAT*AWGLPP
Trigger: AGGAGGAAGTCCCCAAGCGCAAGTGGCAAGGGATCG...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCGATCCCTTGCCACTTaGGCTTGGGGACTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLRSLAT*AWGLPP
Trigger: AGGAGGAAGTCCCCAAGCGCAAGTGGCAAGGGATCG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGTGGGAGAGCTGCTCTaGCGTCAGGCTGAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGVGELL*RQAEAV
Trigger: TACAGCCTCAGCCTGACGGCAGAGCAGCTCTCCCAC...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAGCTCCTAGGACTTGTTaGTTTGAAGAAAATTTTGCA +
Preference number: 4 (lower is better)
Translates to: GADKATRCQLPASCSAQQAPRTC*FEENFA
Trigger: TGCAAAATTTTCTTCAAAGCAACAAGTCCTAGGAGC...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAAGCCAGCAAGCTGTTCTaGGCAGCAAGGGCTAGGGCC +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKASKLF*AARARA
Trigger: GGCCCTAGCCCTTGCTGCGCAGAACAGCTTGCTGGC...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCCCGCTGGAGGTTGAGTaGCGGGAAGCGGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFPLEVE*REAGIL
Trigger: CAGGATTCCCGCTTCCCGCCACTCAACCTCCAGCGG...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGCCGCTGGAGGTTGAGTaGCGGGAAGCGGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWPLEVE*REAGIL
Trigger: CAGGATTCCCGCTTCCCGCCACTCAACCTCCAGCGG...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTTGCGGAGGTCGTCGGTaGTGTGGTAGGGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCCGGRR*CGRAGS
Trigger: GCTTCCGGCCCTACCACACCACCGACGACCTCCGCA...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATTGCGGAGGTCGTCGGTaGTGTGGTAGGGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNCGGRR*CGRAGS
Trigger: GCTTCCGGCCCTACCACACCACCGACGACCTCCGCA...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGTGCCCCGCTCCTCAGTaGCATGGCCACGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVCPAPQ*HGHAAH
Trigger: ATGGGCTGCGTGGCCATGCCACTGAGGAGCGGGGCA...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATTGCCCCGCTCCTCAGTaGCATGGCCACGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNCPAPQ*HGHAAH
Trigger: ATGGGCTGCGTGGCCATGCCACTGAGGAGCGGGGCA...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAACTTCTCTGCTCGGGTTaGGGTCAGCTGCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKLLCSG*GQLLRG
Trigger: CCCTCGGAGCAGCTGACCCCAACCCGAGCAGAGAAG...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGGATGCAAGGGGTGTTaGACGGGCTTGGGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCGCKGC*TGLGAC
Trigger: GCAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCC...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGGATGCAAGGGGTGTTaGACGGGCTTGGGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVGCKGC*TGLGAC
Trigger: GCAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCC...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGGGCACCGTGTGGTGTaGGGTGGGCACCGGATGCAA +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWGHRVV*GGHRMQ
Trigger: TTGCATCCGGTGCCCACCCCACACCACACGGTGCCC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCGGTTTGGTCCTGGCCTaGTGGTGCTCTCCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICGLVLA*WCSPAC
Trigger: ACAGGCCGGAGAGCACCACCAGGCCAGGACCAAACC...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTCATGGAGCTGGGGCTTaGGCGAAATCAGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIHGAGA*AKSEVV
Trigger: CACCACCTCTGATTTCGCCCAAGCCCCAGCTCCATG...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATTGGCTGTGCAGAGAGTaGCTTTCGGCCCGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNWLCRE*LSARRV
Trigger: GACGCGGCGGGCCGAAAGCCACTCTCTGCACAGCCA...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTAGGCTCACGCTTCCGTaGCCCCTCCTCTGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGRLTLP*PLLCFL
Trigger: GAGAAAGCAGAGGAGGGGCCACGGAAGCGTGAGCCT...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGAGGCTCACGCTTCCGTaGCCCCTCCTCTGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVRLTLP*PLLCFL
Trigger: GAGAAAGCAGAGGAGGGGCCACGGAAGCGTGAGCCT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGGCGGCGGAGGTGGCTaGTACTTGTCCAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCGGGGG*YLSRGA
Trigger: TGCCCCTCTGGACAAGTACCAGCCACCTCCGCCGCC...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAATGGTGGCGGCGGAGGTaGCTGGTACTTGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKWWRRR*LVLVQR
Trigger: CCTCTGGACAAGTACCAGCCACCTCCGCCGCCACCA...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTTGGCCCAGGATGGTCTaGGTGGACTTCTCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLWPRMV*VDFSSS
Trigger: TGAGCTCGAGAAGTCCACCCAGACCATCCTGGGCCA...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTCGCTTCCTCCGCTTCTaGGCCACCAATTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIRFLRF*ATNSSF
Trigger: GAAGGAGGAATTGGTGGCCCAGAAGCGGAGGAAGCG...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCCTTGCTCTGAATTGTTaGGGGCGACGGGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLLALNC*GRRASL
Trigger: GAGAGAAGCCCGTCGCCCCCAACAATTCAGAGCAAG...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTAGGCTCCGCGGCCTTTaGGATGTCAGACAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLRLRGL*DVRQGS
Trigger: GCTTCCTTGTCTGACATCCCAAAGGCCGCGGAGCCT...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGTGGCCTTCTCCCCGCTaGCAGGAGCTAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWWPSPR*QELAPG
Trigger: TCCAGGAGCTAGCTCCTGCCAGCGGGGAGAAGGCCA...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAGCACAGGAATGTCCTTaGGTGCAGCGCCCCGGATAT +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSAQECP*VQRPGY
Trigger: ATATCCGGGGCGCTGCACCCAAGGACATTCCTGTGC...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACATTCCCATTGGTGCTGTaGGACAGCGGCACAGGAATG +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETFPLVL*DSGTGM
Trigger: CATTCCTGTGCCGCTGTCCCACAGCACCAATGGGAA...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAACTTGCCACTTGCGCTTaGGGACTTCCTCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCELATCA*GLPPHL
Trigger: AAGATGAGGAGGAAGTCCCCAAGCGCAAGTGGCAAG...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCAACTCCGCCACGCTGTaGGAGAGCTGCTCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFNSATL*ESCSAV
Trigger: GACGGCAGAGCAGCTCTCCCACAGCGTGGCGGAGTT...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGAACTCCGCCACGCTGTaGGAGAGCTGCTCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWNSATL*ESCSAV
Trigger: GACGGCAGAGCAGCTCTCCCACAGCGTGGCGGAGTT...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGACCATCTTCTGTTTCTaGCTCCTCAACTCCGCCACG +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQTIFCF*LLNSAT
Trigger: CGTGGCGGAGTTGAGGAGCCAGAAACAGAAGATGGT...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACCATGACTGTCACACATaGGTTCTACAGACTACCCCC +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNHDCHT*VLQTTP
Trigger: GGGGGTAGTCTGTAGAACCCATGTGTGACAGTCATG...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGCCCCAGACCAGTGACTaGCAGCCCTGGCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVPQTSD*QPWPLV
Trigger: CACCAGAGGCCAGGGCTGCCAGTCACTGGTCTGGGG...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGCCCCAGACCAGTGACTaGCAGCCCTGGCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWPQTSD*QPWPLV
Trigger: CACCAGAGGCCAGGGCTGCCAGTCACTGGTCTGGGG...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGATCACTGCTGAAGGTGTaGGCTCCTTTTGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRSLLKV*APFDAL
Trigger: GAGAGCATCAAAAGGAGCCCACACCTTCAGCAGTGA...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR CAA 72 bp CTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTaGTGTGAAACATGTGGCTCAGGGAAAGGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: LHLVVDPWHFLH*CETCGSGKGVG
Trigger: TCCTACCCCTTTCCCTGAGCCACATGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGAGCCGCTCCCTTTCTaGGACCATCTTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLEPLPF*DHLLFL
Trigger: CAGAAACAGAAGATGGTCTCAGAAAGGGAGCGGCTC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGACTCCTGGGGAGGAATaGGACTGGCCCCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWTPGEE*DWPHRC
Trigger: GCAGCGATGGGGCCAGTCTCATTCCTCCCCAGGAGT...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCGCTACCTTCAGTTTGTaGATTGGTTTTATCTTTAGG +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAATFSL*IGFIFR
Trigger: CCTAAAGATAAAACCAATTCACAAACTGAAGGTAGC...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGCTGGTCACAGCAGTaGGCAGCCGGCACACAGGTC +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWCWSQQ*AAGTQV
Trigger: GACCTGTGTGCCGGCTGCTCACTGCTGTGACCAGCA...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCTGGATGGGGAAACCATaGCTGGGTACTGTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLWMGKP*LGTVSW
Trigger: CCAAGACACAGTACCCAGTCATGGTTTCCCCATCCA...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCGGGAAGCGGGAATCCTaGACAACTGAGCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFGKRES*TTELGE
Trigger: CTCCCCCAGCTCAGTTGTGCAGGATTCCCGCTTCCC...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR GCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCGAGGCAGTGAGGACATaGGGAGGTCGTCGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFEAVRT*GGRRWC
Trigger: ACACCACCGACGACCTCCGCATGTCCTCACTGCCTC...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGCGGACCCCAGAGAGGTaGAGGTGCATCGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVRTPER*RCIADG
Trigger: CCCATCAGCGATGCACCTGCACCTCTCTGGGGTCCG...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGAGCTCCTCGTCCATCTaGAGCCTCTCCGCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWSSSSI*SLSALR
Trigger: CCTCAGCGCGGAGAGGCTGCAGATGGACGAGGAGCT...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTTCTCCTCCTCATTGGTaGGCTGGATCAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGSPPHW*AGSAGL
Trigger: CAGCCCTGCTGATCCAGCGCACCAATGAGGAGGAGA...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATCGGCCCATATCCAGGTaGTGCTCCAGCACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNRPISR*CSSTCC
Trigger: GCAGCAGGTGCTGGAGCAGCACCTGGATATGGGCCG...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTCGGCCCATATCCAGGTaGTGCTCCAGCACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCRPISR*CSSTCC
Trigger: GCAGCAGGTGCTGGAGCAGCACCTGGATATGGGCCG...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTAAGGCGTCTGCCGCTTaGTCTGAATTGTTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGKASAA*SELLGA
Trigger: CGCCCCCAACAATTCAGAGCAAGCGGCAGACGCCTT...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAACATCCAGAGAGGCTTaGTGCGTGGCTGGTTCACTC +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSTSREA*CVAGSL
Trigger: GAGTGAACCAGCCACGCAGCAAGCCTCTCTGGATGT...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000438180.1
CDS-3UTR GCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTTGCTCAGACTCTTTTTaGCTCCAGGGGCCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSICSDSF*LQGPRS
Trigger: TGAGCGAGGCCCCTGGAGGCAAAAAGAGTCTGAGCA...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGTGCTCTTCCCATTGGTaGTGTGGGACAGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVCSSHW*CGTAAQ
Trigger: CTGTGCCGCTGTCCCACAGCACCAATGGGAAGAGCA...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAATGTGCAAACTCTTCTaGCACAAAGGGCTCCCACGG +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLMCKLF*HKGLPR
Trigger: CCGTGGGAGCCCTTTGTGGCAGAAGAGTTTGCACAT...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTCTTGTGGTTCTGCTCTaGAGACAGCACAGCCACGCT +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSILVVLL*RQHSHA
Trigger: AGCGTGGCTGTGCTGTCTGCAGAGCAGAACCACAAG...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCTTGTGGTTCTGCTCTaGAGACAGCACAGCCACGCT +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLLVVLL*RQHSHA
Trigger: AGCGTGGCTGTGCTGTCTGCAGAGCAGAACCACAAG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCACTTGTGGTTCTGCTCTaGAGACAGCACAGCCACGCT +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSLVVLL*RQHSHA
Trigger: AGCGTGGCTGTGCTGTCTGCAGAGCAGAACCACAAG...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCGATCCCTTGCCACTTaGGCTTGGGGACTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVRSLAT*AWGLPP
Trigger: AGGAGGAAGTCCCCAAGCGCAAGTGGCAAGGGATCG...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACTGTGTCTGTAACACCTaGCGCTCCAGATTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNCVCNT*RSRFCS
Trigger: AGAGCAAAATCTGGAGCGGCAGGTGTTACAGACACA...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCGAATCCTTTGCTTCATaGATGGCACATTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAESFAS*MAHSHF
Trigger: AAAATGAGAATGTGCCATGCATGAAGCAAAGGATTC...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GGCCAGTGCATTGCAGGCAAGGCAAGGCACTTTCGTAAGTGGTCCAGTTCTGCCGAATCCTTTGCTTCATaGATGGCACATTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: GQCIAGKARHFRKWSSSAESFAS*MAHSHF
Trigger: AAAATGAGAATGTGCCATGCATGAAGCAAAGGATTC...GGCAGAACTGGACCACTTACGAAAGTGCCTTGCCTTGCCTGCAATGCACTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR GCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAACTCGCCCGTTGCTTTaGCTTGGTGTGATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSTRPLL*LGVMSP
Trigger: TGGGCTCATCACACCAAGGCAAAGCAACGGGCGAGT...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTACTCGCCCGTTGCTTTaGCTTGGTGTGATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLTRPLL*LGVMSP
Trigger: TGGGCTCATCACACCAAGGCAAAGCAACGGGCGAGT...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGCCAGCAAGCTGTTCTaGGCAGCAAGGGCTAGGGCC +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWASKLF*AARARA
Trigger: GGCCCTAGCCCTTGCTGCGCAGAACAGCTTGCTGGC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCCGACACGATGCCAGCTaGCAGCAAGCTGTTCTGCGC +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFRHDAS*QQAVLR
Trigger: GCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCG...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGATAAAGCGACACGATaGCAGCTGCCAGCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLDKATR*QLPASC
Trigger: ACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGGAGTTCTCTTCCAGCTaGTTCTGTGGAGAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQEFSSS*FCGEEG
Trigger: ACCTTCCTCTCCACAGAAGCAGCTGGAAGAGAACTC...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTCCGAGGGCTTTCAGGTaGATCCTGACACACAGGTGG +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGPRAFR*ILTHRW
Trigger: CCACCTGTGTGTCAGGATGCACCTGAAAGCCCTCGG...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCATCACAGCATCTAAACTaGCCCCAGAGTGACCGAGGC +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSSQHLN*PQSDRG
Trigger: GCCTCGGTCACTCTGGGGGCAGTTTAGATGCTGTGA...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCATTCACGGTTTTGGTTaGAGCGATGGTCACCACGGG +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLIHGFG*SDGHHG
Trigger: CCCGTGGTGACCATCGCTCCAACCAAAACCGTGAAT...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATCCTGCACAACTGAGCTaGGGGAGAGGCCGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNPAQLS*GRGRRG
Trigger: ACCCCTTCGGCCTCTCCCCCAGCTCAGTTGTGCAGG...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR CCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTCTTCTCTGCTCGGGTTaGGGTCAGCTGCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCLLCSG*GQLLRG
Trigger: CCCTCGGAGCAGCTGACCCCAACCCGAGCAGAGAAG...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAACTTCTCCTCCTCATTaGTGCGCTGGATCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSTSPPH*CAGSAG
Trigger: CCCTGCTGATCCAGCGCACCAATGAGGAGGAGAAGT...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGTTGGTCCTGGCCTGGTaGTGCTCTCCGGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVLVLAW*CSPACA
Trigger: AGCACAGGCCGGAGAGCACCACCAGGCCAGGACCAA...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAATGGCTCGTGACGGTTTaGTCCTGGCCTGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKWLVTV*SWPGGA
Trigger: AGCACCACCAGGCCAGGACCAAACCGTCACGAGCCA...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCATGGAGCTGGGGCTTaGGCGAAATCAGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVHGAGA*AKSEVV
Trigger: CACCACCTCTGATTTCGCCCAAGCCCCAGCTCCATG...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCATCAAATGCAGCCGGGTaGCTGTGCAGAGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSSNAAG*LCREWL
Trigger: AAGCCACTCTCTGCACAGCCACCCGGCTGCATTTGA...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGTGGCGGCGGAGGTaGCTGGTACTTGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWWWRRR*LVLVQR
Trigger: CCTCTGGACAAGTACCAGCCACCTCCGCCGCCACCA...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTCGCTTCCTCCGCTTCTaGGCCACCAATTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGRFLRF*ATNSSF
Trigger: GAAGGAGGAATTGGTGGCCCAGAAGCGGAGGAAGCG...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCTTGCTCTGAATTGTTaGGGGCGACGGGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLLALNC*GRRASL
Trigger: GAGAGAAGCCCGTCGCCCCCAACAATTCAGAGCAAG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTAGGCTCCGCGGCCTTTaGGATGTCAGACAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGRLRGL*DVRQGS
Trigger: GCTTCCTTGTCTGACATCCCAAAGGCCGCGGAGCCT...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGTGGCCTTCTCCCCGCTaGCAGGAGCTAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVWPSPR*QELAPG
Trigger: TCCAGGAGCTAGCTCCTGCCAGCGGGGAGAAGGCCA...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTTTCCCATTGGTGCTGTaGGACAGCGGCACAGGAATG +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIFPLVL*DSGTGM
Trigger: CATTCCTGTGCCGCTGTCCCACAGCACCAATGGGAA...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGCTTGCTCTTCCCATTaGTGCTGTGGGACAGCGGCA +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGACSSH*CCGTAA
Trigger: TGCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGC...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAGACGTGTCAACCTTGTaGTTCTGCTCTGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLDVSTL*FCSADS
Trigger: GCTGTCTGCAGAGCAGAACCACAAGGTTGACACGTC...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAAGGCACTTTCGTAAGTaGTCCAGTTCTGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETRHFRK*SSSAWS
Trigger: GCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCT...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCAGGCACTTTCGTAAGTaGTCCAGTTCTGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLRHFRK*SSSAWS
Trigger: GCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCT...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAAGGGAAACCGTCACCTaGGATATCCCTTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETRETVT*DIPSGS
Trigger: GCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCT...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGGTAAGCAGTAGCGCATaGCTTTCTACGGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQVSSSA*LSTAAS
Trigger: AGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTAC...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAGGTAATGTAGGAAGATaGTCTAAGGACCGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCEGNVGR*SKDRAE
Trigger: CTCGGCTCGGTCCTTAGACCATCTTCCTACATTACC...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACACTGGATGGAAAAGTTaGGGACAGGCTACTGCAAGT +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNTGWKS*GQATAS
Trigger: ACTTGCAGTAGCCTGTCCCCAACTTTTCCATCCAGT...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATTGCCATGGTTGGAGATaGGGCTGGGCACCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNCHGWR*GWAPCG
Trigger: ACCACACGGTGCCCAGCCTCATCTCCAACCATGGCA...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCACTGACTCGTGGAACTaGTGTGCAAACTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLTDSWN*CANSSA
Trigger: GGCAGAAGAGTTTGCACATCAGTTCCACGAGTCAGT...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTGAGCCGCTCCCTTTCTaGGACCATCTTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLEPLPF*DHLLFL
Trigger: CAGAAACAGAAGATGGTCTCAGAAAGGGAGCGGCTC...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR TCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAAGTGATTCAATTGCATTaGCGTCAAGGTGAGTTCATT +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQVIQLH*RQGEFI
Trigger: AATGAACTCACCTTGACGTCAATGCAATTGAATCAC...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCAAACTAAAAATGAAGTaGTCGCATAGGCGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGKLKMK*SHRRQW
Trigger: CCACTGGCGCCTATGCGATCACTTCATTTTTAGTTT...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTGCCCATGTGTGCACATaGCTGTCACACATGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLAHVCT*LSHMGS
Trigger: AGAACCCATGTGTGACAGTCATGTGCACACATGGGC...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGATGAGCCCAGTTTCTaGCCGTTCCTGTGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIDEPSF*PFLCLS
Trigger: TGACAAGCACAGGAACGGTCAGAAACTGGGCTCATC...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAACCTGTGGAACATGCTaGCCTCCCAGTGTCTTTCGA +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSTCGTC*PPSVFR
Trigger: TCGAAAGACACTGGGAGGTCAGCATGTTCCACAGGT...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAGTAGCAGACTCCCTCTaGACACCTGTGGAACATGCT +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSVADSL*TPVEHA
Trigger: AGCATGTTCCACAGGTGTTCAGAGGGAGTCTGCTAC...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAACTATTGCTAGCACAGTaGCACTGCTCCCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKLLLAQ*HCSHPG
Trigger: CCCAGGGTGGGAGCAGTGTCACTGTGCTAGCAATAG...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAAAGTGGGGTTTCCACTaGCAGGGGAGAAGCCAACTA +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSKWGFH*QGRSQL
Trigger: TAGTTGGCTTCTCCCCTGTCAGTGGAAACCCCACTT...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCATGGATGGGGAAACCATaGCTGGGTACTGTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSWMGKP*LGTVSW
Trigger: CCAAGACACAGTACCCAGTCATGGTTTCCCCATCCA...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACACTCCAGAGCAGATTTaGGGTACTCAGTGTGAAGTA +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNTPEQI*GTQCEV
Trigger: TACTTCACACTGAGTACCTCAAATCTGCTCTGGAGT...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTACTTTCAGGTGCATCCTaGCACACAGGTGGCATAATC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLLSGAS*HTGGII
Trigger: GATTATGCCACCTGTGTGTCAGGATGCACCTGAAAG...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAGGTGTGGGCTCCTTTTaGTGCTCTCTGAATACTCTT +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCEGVGSF*CSLNTL
Trigger: AAGAGTATTCAGAGAGCATCAAAAGGAGCCCACACC...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGAGGCAGTGAGGACATaGGGAGGTCGTCGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWEAVRT*GGRRWC
Trigger: ACACCACCGACGACCTCCGCATGTCCTCACTGCCTC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATGTGCAAACTCTTCTaGCACAAAGGGCTCCCACGG +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSMCKLF*HKGLPR
Trigger: CCGTGGGAGCCCTTTGTGGCAGAAGAGTTTGCACAT...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTCTCCCTTTATGCTTCTaGAGGGCCTTCTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGLPLCF*RAFWVD
Trigger: GTCCACCCAGAAGGCCCTGCAGAAGCATAAAGGGAG...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCGCCACGCTCCCTTTATaGTTCTGCAGGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICATLPL*FCRAFW
Trigger: CCAGAAGGCCCTGCAGAAGCATAAAGGGAGCGTGGC...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGTGTGTCTGTAACACCTaGCGCTCCAGATTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQCVCNT*RSRFCS
Trigger: AGAGCAAAATCTGGAGCGGCAGGTGTTACAGACACA...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGGGAGAGCTGCTCTaGCGTCAGGCTGAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCVGELL*RQAEAV
Trigger: TACAGCCTCAGCCTGACGGCAGAGCAGCTCTCCCAC...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGACAATCCTACATTGGTTaGTCGCTGAATGACAACGGT +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRQSYIG*SLNDNG
Trigger: ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTG...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGACTGGCCCCATCGCTaGGGCAAAAGCAAACTGGGC +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCDWPHR*GKSKLG
Trigger: GCCCAGTTTGCTTTTGCCGCAGCGATGGGGCCAGTC...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGACTGGCCCCATCGCTaGGGCAAAAGCAAACTGGGC +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVDWPHR*GKSKLG
Trigger: GCCCAGTTTGCTTTTGCCGCAGCGATGGGGCCAGTC...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTGATAAAGCGACACGATaGCAGCTGCCAGCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLDKATR*QLPASC
Trigger: ACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATC...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACCTGTGGAGAGGAAGGTaGTTGTTGACTGCTGATAAT +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNLWRGR*LLTADN
Trigger: ATTATCAGCAGTCAACAAGCACCTTCCTCTCCACAG...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATTTTCGAGGGGAGGCCTaGAGCACAGCCCCTCGAGTT +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNFRGEA*STAPRV
Trigger: AACTCGAGGGGCTGTGCTGCAGGCCTCCCCTCGAAA...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGAGACCTCTCATGGTGTaGCACCTGTCCCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWRPLMV*HLSPVL
Trigger: CAGCACAGGGGACAGGTGGCACACCATGAGAGGTCT...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGTCGGCTGATACATGCTaGAGCCACCGTCGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVSADTC*SHRRPV
Trigger: CACTGGGCGACGGTGGCTCCAGCATGTATCAGCCGA...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTACACCATTCACGGTTTTaGTTGGAGCGATGGTCACCA +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLHHSRF*LERWSP
Trigger: TGGTGACCATCGCTCCAACCAAAACCGTGAATGGTG...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGACTTCTCCTCCTCATTaGTGCGCTGGATCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVTSPPH*CAGSAG
Trigger: CCCTGCTGATCCAGCGCACCAATGAGGAGGAGAAGT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTACTTCTCCTCCTCATTaGTGCGCTGGATCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGTSPPH*CAGSAG
Trigger: CCCTGCTGATCCAGCGCACCAATGAGGAGGAGAAGT...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTTGGCTCGTGACGGTTTaGTCCTGGCCTGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCWLVTV*SWPGGA
Trigger: AGCACCACCAGGCCAGGACCAAACCGTCACGAGCCA...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGTGGCTCGTGACGGTTTaGTCCTGGCCTGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVWLVTV*SWPGGA
Trigger: AGCACCACCAGGCCAGGACCAAACCGTCACGAGCCA...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTTCAAATGCAGCCGGGTaGCTGTGCAGAGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGSNAAG*LCREWL
Trigger: AAGCCACTCTCTGCACAGCCACCCGGCTGCATTTGA...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCTGGCCCAGGATGGTCTaGGTGGACTTCTCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFWPRMV*VDFSSS
Trigger: TGAGCTCGAGAAGTCCACCCAGACCATCCTGGGCCA...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGCCTTCTGCTGTTGGGTaGTCAAGCCAAAAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQPSAVG*SSQKVA
Trigger: TGCAACTTTTTGGCTTGACCACCCAACAGCAGAAGG...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAATCCTCCTTCTGCTGTTaGGTGGTCAAGCCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCESSFCC*VVKPKS
Trigger: ACTTTTTGGCTTGACCACCCAACAGCAGAAGGAGGA...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAACGCTTCCTCCGCTTCTaGGCCACCAATTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKRFLRF*ATNSSF
Trigger: GAAGGAGGAATTGGTGGCCCAGAAGCGGAGGAAGCG...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCGAGAGGCTTGCTGCGTaGCTGGTTCACTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICERLAA*LVHSGR
Trigger: TCTCCCTGAGTGAACCAGCCACGCAGCAAGCCTCTC...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAAGCACAGGAATGTCCTTaGGTGCAGCGCCCCGGATAT +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKAQECP*VQRPGY
Trigger: ATATCCGGGGCGCTGCACCCAAGGACATTCCTGTGC...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTTTCCCATTGGTGCTGTaGGACAGCGGCACAGGAATG +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGFPLVL*DSGTGM
Trigger: CATTCCTGTGCCGCTGTCCCACAGCACCAATGGGAA...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGCAGGGCCTTCTGGGTaGACTGCAGCACTGACTCGT +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWAGPSG*TAALTR
Trigger: ACGAGTCAGTGCTGCAGTCCACCCAGAAGGCCCTGC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTAGGCACTTTCGTAAGTaGTCCAGTTCTGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIRHFRK*SSSAWS
Trigger: GCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCT...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAAGCAAGTTTCACTCCTaGGGAGGAATGAGACTGGCC +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSSKFHS*GGMRLA
Trigger: GGCCAGTCTCATTCCTCCCCAGGAGTGAAACTTGCT...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAGTAAGCAGTAGCGCATaGCTTTCTACGGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLVSSSA*LSTAAS
Trigger: AGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTAC...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCCCGTTGCTTTGCCTTaGTGTGATGAGCCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLPVALP*CDEPSF
Trigger: GAAACTGGGCTCATCACACCAAGGCAAAGCAACGGG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCACCCGTTGCTTTGCCTTaGTGTGATGAGCCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSPVALP*CDEPSF
Trigger: GAAACTGGGCTCATCACACCAAGGCAAAGCAACGGG...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCTCTGGTGAGGGCCCTTaGGAGCAAGAGAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFSGEGP*EQERPS
Trigger: AGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGA...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAGGGAGTGCCCCTTaGATGGTAAGGGATGAGCTA +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLQGSAP*MVRDEL
Trigger: TAGCTCATCCCTTACCATCCAAGGGGCACTCCCTTG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTTGGGCAGACCTCTCATaGTGTGCCACCTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCWADLS*CATCPL
Trigger: CAGGGGACAGGTGGCACACCATGAGAGGTCTGCCCA...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGGCAGACCTCTCATaGTGTGCCACCTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWWADLS*CATCPL
Trigger: CAGGGGACAGGTGGCACACCATGAGAGGTCTGCCCA...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATTGGGCAGACCTCTCATaGTGTGCCACCTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNWADLS*CATCPL
Trigger: CAGGGGACAGGTGGCACACCATGAGAGGTCTGCCCA...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGGTACTGTGTCTTGGGTaGTGTGCTTTCGTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEVLCLG*CAFVFE
Trigger: CTCAAAAACGAAAGCACACCACCCAAGACACAGTAC...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAACTGGGTACTGTGTCTTaGGTGGTGTGCTTTCGTTTT +
Preference number: 4 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCELGTVS*VVCFRF
Trigger: AAAACGAAAGCACACCACCCAAGACACAGTACCCAG...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGCTGGGTACTGTGTCTTaGGTGGTGTGCTTTCGTTTT +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQLGTVS*VVCFRF
Trigger: AAAACGAAAGCACACCACCCAAGACACAGTACCCAG...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAGGTAATGTAGGAAGATaGTCTAAGGACCGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLGNVGR*SKDRAE
Trigger: CTCGGCTCGGTCCTTAGACCATCTTCCTACATTACC...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTATCACTGCTGAAGGTGTaGGCTCCTTTTGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLSLLKV*APFDAL
Trigger: GAGAGCATCAAAAGGAGCCCACACCTTCAGCAGTGA...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTGAGAGGCTTGCTGCGTaGCTGGTTCTTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLERLAA*LVLSSS
Trigger: AGAAGAGGAAAGAACCAGCCACGCAGCAAGCCTCTC...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412692.5
CDS-3UTR TCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTACTGACTCGTGGAACTaGTGTGCAAACTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLTDSWN*CANSSA
Trigger: GGCAGAAGAGTTTGCACATCAGTTCCACGAGTCAGT...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR TCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAACTGACTCGTGGAACTaGTGTGCAAACTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSTDSWN*CANSSA
Trigger: GGCAGAAGAGTTTGCACATCAGTTCCACGAGTCAGT...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR TCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGGTGGACTGCAGCACTaGCTCGTGGAACTGATGTGC +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCGGLQH*LVELMC
Trigger: GCACATCAGTTCCACGAGTCAGTGCTGCAGTCCACC...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAAGAACAGAACCGGTTTaGTCCACTCATATGCACAGG +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETRTEPV*STHMHR
Trigger: CCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCT...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAACAATCTGGTGGGTGTaGAGCTGTGTATACACAGAG +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETTIWWV*SCVYTE
Trigger: CTCTGTGTATACACAGCTTCACACCCACCAGATTGT...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAAAATATTTTAATGTCCTaGCCAGCAGCAGTACAAACA +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQNILMS*PAAVQT
Trigger: TGTTTGTACTGCTGCTGGTCAGGACATTAAAATATT...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTGAGGAAGGTGCTTGTTaGCTGCTGATAATACTGGCG +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLEEGAC*LLIILA
Trigger: CGCCAGTATTATCAGCAGTCAACAAGCACCTTCCTC...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGTAGCAGACTCCCTCTaGACACCTGTGGAACATGCT +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGVADSL*TPVEHA
Trigger: AGCATGTTCCACAGGTGTTCAGAGGGAGTCTGCTAC...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAATTGGATGGTAAGGGATaGGCTACGTTTTTAAGTTAT +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQLDGKG*ATFLSY
Trigger: ATAACTTAAAAACGTAGCTCATCCCTTACCATCCAA...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGAAGTGGGGTTTCCACTaGCAGGGGAGAAGCCAACTA +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVKWGFH*QGRSQL
Trigger: TAGTTGGCTTCTCCCCTGTCAGTGGAAACCCCACTT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGTGGATGGGGAAACCATaGCTGGGTACTGTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVWMGKP*LGTVSW
Trigger: CCAAGACACAGTACCCAGTCATGGTTTCCCCATCCA...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCACTTTCAGGTGCATCCTaGCACACAGGTGGCATAATC +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSLSGAS*HTGGII
Trigger: GATTATGCCACCTGTGTGTCAGGATGCACCTGAAAG...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGGTGTGGGCTCCTTTTaGTGCTCTCTGAATACTCTT +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLGVGSF*CSLNTL
Trigger: AAGAGTATTCAGAGAGCATCAAAAGGAGCCCACACC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAAGAATCCTTCACTGCTaGAGGTGTGGGCTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSRILHC*RCGLLL
Trigger: CAAAAGGAGCCCACACCTTCAGCAGTGAAGGATTCT...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTAGAATCCTTCACTGCTaGAGGTGTGGGCTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLRILHC*RCGLLL
Trigger: CAAAAGGAGCCCACACCTTCAGCAGTGAAGGATTCT...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGCCAGAGAGGTGCAGGTaGATCGCTGATGGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWPERCR*IADGCS
Trigger: ACTGCACCCATCAGCGATGCACCTGCACCTCTCTGG...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGTCTCCTCCTCATTGGTaGGCTGGATCAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVSPPHW*AGSAGL
Trigger: CAGCCCTGCTGATCCAGCGCACCAATGAGGAGGAGA...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCTGCTCAGACTCTTTTTaGCTCCAGGGGCCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICCSDSF*LQGPRS
Trigger: TGAGCGAGGCCCCTGGAGGCAAAAAGAGTCTGAGCA...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAATGCTCAGACTCTTTTTaGCTCCAGGGGCCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKCSDSF*LQGPRS
Trigger: TGAGCGAGGCCCCTGGAGGCAAAAAGAGTCTGAGCA...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCAGGAATGTCCTTGGGTaGAGCGCCCCGGATATAGTG +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFRNVLG*SAPDIV
Trigger: CACTATATCCGGGGCGCTGCACCCAAGGACATTCCT...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGAGGAATGTCCTTGGGTaGAGCGCCCCGGATATAGTG +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWRNVLG*SAPDIV
Trigger: CACTATATCCGGGGCGCTGCACCCAAGGACATTCCT...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCAGGAATGTCCTTGGGTaGAGCGCCCCGGATATAGTG +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICRNVLG*SAPDIV
Trigger: CACTATATCCGGGGCGCTGCACCCAAGGACATTCCT...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTATGTGCAAACTCTTCTaGCACAAAGGGCTCCCACGG +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGMCKLF*HKGLPR
Trigger: CCGTGGGAGCCCTTTGTGGCAGAAGAGTTTGCACAT...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGCTCGTGGAACTGATGTaGAAACTCTTCTGCCACAAA +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQLVELM*KLFCHK
Trigger: TTTGTGGCAGAAGAGTTTGCACATCAGTTCCACGAG...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGCCTTCTGGGTGGACTaGAGCACTGACTCGTGGAAC +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVAFWVD*STDSWN
Trigger: GTTCCACGAGTCAGTGCTGCAGTCCACCCAGAAGGC...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCCTCCCTTTATGCTTCTaGAGGGCCTTCTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFLPLCF*RAFWVD
Trigger: GTCCACCCAGAAGGCCCTGCAGAAGCATAAAGGGAG...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGCCACGCTCCCTTTATaGTTCTGCAGGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCATLPL*FCRAFW
Trigger: CCAGAAGGCCCTGCAGAAGCATAAAGGGAGCGTGGC...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGCTTGTGGTTCTGCTCTaGAGACAGCACAGCCACGCT +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWLVVLL*RQHSHA
Trigger: AGCGTGGCTGTGCTGTCTGCAGAGCAGAACCACAAG...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGCAATCCTACATTGGTTaGTCGCTGAATGACAACGGT +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQQSYIG*SLNDNG
Trigger: ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTG...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCACACCATTCACGGTTTTaGTTGGAGCGATGGTCACCA +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSHHSRF*LERWSP
Trigger: TGGTGACCATCGCTCCAACCAAAACCGTGAATGGTG...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTTCCTCATTGGTGCGCTaGATCAGCAGGGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCSSLVR*ISRAVA
Trigger: TGCCACAGCCCTGCTGATCCAGCGCACCAATGAGGA...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGGTGCAGCATGGAGCTaGGGCTTGGGCGAAATCAGA +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWGAAWS*GLGEIR
Trigger: TCTGATTTCGCCCAAGCCCCAGCTCCATGCTGCACC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCTCAAATGCAGCCGGGTaGCTGTGCAGAGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICSNAAG*LCREWL
Trigger: AAGCCACTCTCTGCACAGCCACCCGGCTGCATTTGA...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGCCAGGATGGTCTGGGTaGACTTCTCGAGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWPGWSG*TSRAQP
Trigger: TGGCTGAGCTCGAGAAGTCCACCCAGACCATCCTGG...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTACCTTCTGCTGTTGGGTaGTCAAGCCAAAAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLPSAVG*SSQKVA
Trigger: TGCAACTTTTTGGCTTGACCACCCAACAGCAGAAGG...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACATCCTCCTTCTGCTGTTaGGTGGTCAAGCCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETSSFCC*VVKPKS
Trigger: ACTTTTTGGCTTGACCACCCAACAGCAGAAGGAGGA...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAACTTGCTCTGAATTGTTaGGGGCGACGGGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKLALNC*GRRASL
Trigger: GAGAGAAGCCCGTCGCCCCCAACAATTCAGAGCAAG...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGAGAGGCTTGCTGCGTaGCTGGTTCACTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVERLAA*LVHSGR
Trigger: TCTCCCTGAGTGAACCAGCCACGCAGCAAGCCTCTC...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGCACAGGAATGTCCTTaGGTGCAGCGCCCCGGATAT +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWAQECP*VQRPGY
Trigger: ATATCCGGGGCGCTGCACCCAAGGACATTCCTGTGC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGCACAGGAATGTCCTTaGGTGCAGCGCCCCGGATAT +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVAQECP*VQRPGY
Trigger: ATATCCGGGGCGCTGCACCCAAGGACATTCCTGTGC...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAATTCCCATTGGTGCTGTaGGACAGCGGCACAGGAATG +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKFPLVL*DSGTGM
Trigger: CATTCCTGTGCCGCTGTCCCACAGCACCAATGGGAA...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGCTTGCTCTTCCCATTaGTGCTGTGGGACAGCGGCA +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWACSSH*CCGTAA
Trigger: TGCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGACGTGTCAACCTTGTaGTTCTGCTCTGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGDVSTL*FCSADS
Trigger: GCTGTCTGCAGAGCAGAACCACAAGGTTGACACGTC...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAACAAGTAGGTTTTCAGTaGAGAAATCCAGTGAGATTT +
Preference number: 4 (lower is better)
Translates to: EEVSSSAWLSTAASGATQQVGFQ*RNPVRF
Trigger: AAATCTCACTGGATTTCTCCACTGAAAACCTACTTG...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCAAGGGAGTGCCCCTTaGATGGTAAGGGATGAGCTA +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVQGSAP*MVRDEL
Trigger: TAGCTCATCCCTTACCATCCAAGGGGCACTCCCTTG...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATACACTGCTCCCACCCTaGGCAGACCTCTCATGGTGT +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNTLLPP*ADLSWC
Trigger: ACACCATGAGAGGTCTGCCCAGGGTGGGAGCAGTGT...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGACACTGCTCCCACCCTaGGCAGACCTCTCATGGTGT +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWTLLPP*ADLSWC
Trigger: ACACCATGAGAGGTCTGCCCAGGGTGGGAGCAGTGT...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACGAAAGGGGTAGGATCTaGTGTGAAATTCAGCTTAAC +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNERGRI*CEIQLN
Trigger: GTTAAGCTGAATTTCACACCAGATCCTACCCCTTTC...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAACCATCTCCATCTTGTaGTGGATCCCTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLTISIL*WIPGIF
Trigger: GAAAATGCCAGGGATCCACCACAAGATGGAGATGGT...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCACCATCTCCATCTTGTaGTGGATCCCTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLTISIL*WIPGIF
Trigger: GAAAATGCCAGGGATCCACCACAAGATGGAGATGGT...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGACTGACTCGTGGAACTaGTGTGCAAACTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVTDSWN*CANSSA
Trigger: GGCAGAAGAGTTTGCACATCAGTTCCACGAGTCAGT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAAGAACAGAACCGGTTTaGTCCACTCATATGCACAGG +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSRTEPV*STHMHR
Trigger: CCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCT...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCAAAGCAAACTGGGCTTaGGGCATAGTAACATGGCAA +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLKANWA*GIVTWQ
Trigger: TTGCCATGTTACTATGCCTCAAGCCCAGTTTGCTTT...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCCCAACCTTTTCAGCTaGAGCAAGTTTCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVPNLFS*SKFHSW
Trigger: CCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGG...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGATAAGCCCTTTTTACTaGCAATGCACCCAACCTTTT +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEISPFY*QCTQPF
Trigger: AAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTAT...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAAACCTGTGGAACATGCTaGCCTCCCAGTGTCTTTCGA +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKTCGTC*PPSVFR
Trigger: TCGAAAGACACTGGGAGGTCAGCATGTTCCACAGGT...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCTGTCGTATTACTTCTTaGGCAAGAGTAGAGTACTCA +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGCRITS*ARVEYS
Trigger: TGAGTACTCTACTCTTGCTCAAGAAGTAATACGACA...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGTGTCGTATTACTTCTTaGGCAAGAGTAGAGTACTCA +
Preference number: 4 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNECRITS*ARVEYS
Trigger: TGAGTACTCTACTCTTGCTCAAGAAGTAATACGACA...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGGTGTGGGCTCCTTTTaGTGCTCTCTGAATACTCTT +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIGVGSF*CSLNTL
Trigger: AAGAGTATTCAGAGAGCATCAAAAGGAGCCCACACC...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGAGGAATGTCCTTGGGTaGAGCGCCCCGGATATAGTG +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWRNVLG*SAPDIV
Trigger: CACTATATCCGGGGCGCTGCACCCAAGGACATTCCT...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTTGCCGCTCCAGATTTTaGTCTTCTATGTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLCRSRF*SSMCSW
Trigger: CCAGGAACACATAGAAGAGCAAAATCTGGAGCGGCA...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTGAGCCTGGAATCCTTTaGTTCATGCATGGCACATTC +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLEPGIL*FMHGTF
Trigger: GAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTC...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACACAATCCTACATTGGTTaGTCGCTGAATGACAACGGT +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETQSYIG*SLNDNG
Trigger: ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTG...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCACAGAGCTCTGTACATaGTCCCCACGGAGTAATAAA +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLTELCT*SPRSNK
Trigger: TTTATTACTCCGTGGGGAGCATGTACAGAGCTCTGT...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTACTCGCCCGTTGCTTTaGCTTGGTGTGATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCTRPLL*LGVMSP
Trigger: TGGGCTCATCACACCAAGGCAAAGCAACGGGCGAGT...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGAGTTCTCTTCCAGCTaGTTCTGTGGAGAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGEFSSS*FCGEEG
Trigger: ACCTTCCTCTCCACAGAAGCAGCTGGAAGAGAACTC...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAAATCCAACCAAGGGAGTaGCCCTTGGATGGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKIQPRE*PLDGKG
Trigger: TCCCTTACCATCCAAGGGGCACTCCCTTGGTTGGAT...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCATCCAACCAAGGGAGTaGCCCTTGGATGGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICIQPRE*PLDGKG
Trigger: TCCCTTACCATCCAAGGGGCACTCCCTTGGTTGGAT...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCATCCTCCTTCTGCTGTTaGGTGGTCAAGCCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSSSFCC*VVKPKS
Trigger: ACTTTTTGGCTTGACCACCCAACAGCAGAAGGAGGA...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTTTCTCAGCGCTGATGTaGGTCAGGTTGAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGFSALM*VRLKMV
Trigger: GACCATCTTCAACCTGACCCACATCAGCGCTGAGAA...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGCTTGCCACTTGCGCTTaGGGACTTCCTCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWLATCA*GLPPHL
Trigger: AAGATGAGGAGGAAGTCCCCAAGCGCAAGTGGCAAG...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAAACCATCTTCTGTTTCTaGCTCCTCAACTCCGCCACG +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKTIFCF*LLNSAT
Trigger: CGTGGCGGAGTTGAGGAGCCAGAAACAGAAGATGGT...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAAAGGCACTTTCGTAAGTaGTCCAGTTCTGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKRHFRK*SSSAWS
Trigger: GCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCT...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACGAGTTTGCTAATAACTaGAAGATTCTTGGCAGACGT +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNEFANN*KILGRR
Trigger: ACGTCTGCCAAGAATCTTCCAGTTATTAGCAAACTC...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCTGGGGAAACCATGACTaGGTACTGTGTCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFWGNHD*VLCLGW
Trigger: CCACCCAAGACACAGTACCCAGTCATGGTTTCCCCA...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAAAACTAATAGTTGGATaGGGAAACCATGACTGGGTA +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRKLIVG*GNHDWV
Trigger: TACCCAGTCATGGTTTCCCCATCCAACTATTAGTTT...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTATCCTGACACACAGGTaGCATAATCGACTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGILTHR*HNRLQS
Trigger: GCTCTGGAGTCGATTATGCCACCTGTGTGTCAGGAT...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAATCTCCATCTTGTGGTaGATCCCTGGCATTTTCTAC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLISILW*IPGIFY
Trigger: GTAGAAAATGCCAGGGATCCACCACAAGATGGAGAT...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTAGGTTAAGCACTGGATaGAAAAGTTGGGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLRLSTG*KSWGQA
Trigger: AGCCTGTCCCCAACTTTTCCATCCAGTGCTTAACCT...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGGCTTGCTGCGTGGCTaGTTCTTTCCTCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWGLLRG*FFPLLS
Trigger: GCTGAGAAGAGGAAAGAACCAGCCACGCAGCAAGCC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412692.5
3UTR CAA 72 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTaGCTTTGTGTGCTCCTAGGACTTGTTGCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFG*LCVLLGLVALK
Trigger: CTTCAAAGCAACAAGTCCTAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
3UTR CAA 72 bp TACATTCGTCTGAGTTTGCTAATAACTGGAAGATTCTaGGCAGACGTACAAAGCAAACTGTGCGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: YIRLSLLITGRF*ADVQSKLCGGR
Trigger: TCTGCCCCCGCACAGTTTGCTTTGTACGTCTGCCAAGAATCTTCCAGTTATTAGCAAACTCAGACGAATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGAGCCGCTCCCTTTCTaGGACCATCTTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWEPLPF*DHLLFL
Trigger: CAGAAACAGAAGATGGTCTCAGAAAGGGAGCGGCTC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGAGCCGCTCCCTTTCTaGGACCATCTTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVEPLPF*DHLLFL
Trigger: CAGAAACAGAAGATGGTCTCAGAAAGGGAGCGGCTC...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGAGAACAGAACCGGTTTaGTCCACTCATATGCACAGG +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVRTEPV*STHMHR
Trigger: CCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAGCTACCTTCAGTTTGTaGATTGGTTTTATCTTTAGG +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRATFSL*IGFIFR
Trigger: CCTAAAGATAAAACCAATTCACAAACTGAAGGTAGC...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGACAATCTGGTGGGTGTaGAGCTGTGTATACACAGAG +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVTIWWV*SCVYTE
Trigger: CTCTGTGTATACACAGCTTCACACCCACCAGATTGT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACATACACAGTACAAGGCTaGAGCACCTTTGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETYTVQG*STFDFS
Trigger: AGAAAAGTCAAAGGTGCTTCAGCCTTGTACTGTGTA...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCAATATTTTAATGTCCTaGCCAGCAGCAGTACAAACA +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGNILMS*PAAVQT
Trigger: TGTTTGTACTGCTGCTGGTCAGGACATTAAAATATT...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAAAACTAAAAATGAAGTaGTCGCATAGGCGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSKLKMK*SHRRQW
Trigger: CCACTGGCGCCTATGCGATCACTTCATTTTTAGTTT...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGATGAGCCCAGTTTCTaGCCGTTCCTGTGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCDEPSF*PFLCLS
Trigger: TGACAAGCACAGGAACGGTCAGAAACTGGGCTCATC...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAAGTGGAGAAATCCAGTaGGATTTTGCCCTGATAGTT +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETSGEIQ*DFALIV
Trigger: AACTATCAGGGCAAAATCTCACTGGATTTCTCCACT...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAAGTGGAGAAATCCAGTaGGATTTTGCCCTGATAGTT +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLSGEIQ*DFALIV
Trigger: AACTATCAGGGCAAAATCTCACTGGATTTCTCCACT...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTATTTTCTACACTTGTGTaGAACATGTGGCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLFSTLV*NMWLRE
Trigger: TTCCCTGAGCCACATGTTTCACACAAGTGTAGAAAA...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCGTCAAGCCAAAAAGTTaGAAAAACTCTAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGVKPKS*KNSSFS
Trigger: TGAGAAGCTAGAGTTTTTGCAACTTTTTGGCTTGAC...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACGTCAAGCCAAAAAGTTaGAAAAACTCTAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNVKPKS*KNSSFS
Trigger: TGAGAAGCTAGAGTTTTTGCAACTTTTTGGCTTGAC...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGGATATAGTGAAGCATaGTCAGACTCTTTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLGYSEA*SDSFCL
Trigger: GAGGCAAAAAGAGTCTGAGCATGCTTCACTATATCC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAGGATATAGTGAAGCATaGTCAGACTCTTTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLGYSEA*SDSFCL
Trigger: GAGGCAAAAAGAGTCTGAGCATGCTTCACTATATCC...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGTGCCGCTCCAGATTTTaGTCTTCTATGTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVCRSRF*SSMCSW
Trigger: CCAGGAACACATAGAAGAGCAAAATCTGGAGCGGCA...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTTGTGTCTGTAACACCTaGCGCTCCAGATTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGCVCNT*RSRFCS
Trigger: AGAGCAAAATCTGGAGCGGCAGGTGTTACAGACACA...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGGAGCCTGGAATCCTTTaGTTCATGCATGGCACATTC +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVEPGIL*FMHGTF
Trigger: GAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTC...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATGATAAAGCGACACGATaGCAGCTGCCAGCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNDKATR*QLPASC
Trigger: ACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATC...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAAGAGTTCTCTTCCAGCTaGTTCTGTGGAGAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKEFSSS*FCGEEG
Trigger: ACCTTCCTCTCCACAGAAGCAGCTGGAAGAGAACTC...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGACATCCAGAGAGGCTTaGTGCGTGGCTGGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVTSREA*CVAGSF
Trigger: GAAAGAACCAGCCACGCAGCAAGCCTCTCTGGATGT...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGATTCACGGTTTTGGTTaGAGCGATGGTCACCACGGG +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVIHGFG*SDGHHG
Trigger: CCCGTGGTGACCATCGCTCCAACCAAAACCGTGAAT...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCCACCATTCACGGTTTTaGTTGGAGCGATGGTCACCA +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICHHSRF*LERWSP
Trigger: TGGTGACCATCGCTCCAACCAAAACCGTGAATGGTG...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCTTCTCAGCGCTGATGTaGGTCAGGTTGAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFFSALM*VRLKMV
Trigger: GACCATCTTCAACCTGACCCACATCAGCGCTGAGAA...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAATTCTCAGCGCTGATGTaGGTCAGGTTGAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKFSALM*VRLKMV
Trigger: GACCATCTTCAACCTGACCCACATCAGCGCTGAGAA...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATGACGTGTCAACCTTGTaGTTCTGCTCTGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNDVSTL*FCSADS
Trigger: GCTGTCTGCAGAGCAGAACCACAAGGTTGACACGTC...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGACGTGTCAACCTTGTaGTTCTGCTCTGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWDVSTL*FCSADS
Trigger: GCTGTCTGCAGAGCAGAACCACAAGGTTGACACGTC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGAGGCACTTTCGTAAGTaGTCCAGTTCTGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVRHFRK*SSSAWS
Trigger: GCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCT...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGAGGGAAACCGTCACCTaGGATATCCCTTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVRETVT*DIPSGS
Trigger: GCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCT...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGAGCAAGTTTCACTCCTaGGGAGGAATGAGACTGGCC +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVSKFHS*GGMRLA
Trigger: GGCCAGTCTCATTCCTCCCCAGGAGTGAAACTTGCT...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTCCCGTTGCTTTGCCTTaGTGTGATGAGCCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCPVALP*CDEPSF
Trigger: GAAACTGGGCTCATCACACCAAGGCAAAGCAACGGG...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAGTACTGTGTCTTGGGTaGTGTGCTTTCGTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSVLCLG*CAFVFE
Trigger: CTCAAAAACGAAAGCACACCACCCAAGACACAGTAC...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGTGGGGAAACCATGACTaGGTACTGTGTCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVWGNHD*VLCLGW
Trigger: CCACCCAAGACACAGTACCCAGTCATGGTTTCCCCA...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCATCCTGACACACAGGTaGCATAATCGACTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICILTHR*HNRLQS
Trigger: GCTCTGGAGTCGATTATGCCACCTGTGTGTCAGGAT...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGGGTAATGTAGGAAGATaGTCTAAGGACCGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWGNVGR*SKDRAE
Trigger: CTCGGCTCGGTCCTTAGACCATCTTCCTACATTACC...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGACAGATAATTTACTATTaGAAGGTATCCCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRQIIYY*KVSLCR
Trigger: TCTGCAGAGGGATACCTTCCAATAGTAAATTATCTG...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGAAAGGGGTAGGATCTaGTGTGAAATTCAGCTTAAC +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLERGRI*CEIQLN
Trigger: GTTAAGCTGAATTTCACACCAGATCCTACCCCTTTC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAATCTCCATCTTGTGGTaGATCCCTGGCATTTTCTAC +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSISILW*IPGIFY
Trigger: GTAGAAAATGCCAGGGATCCACCACAAGATGGAGAT...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTACCATCTCCATCTTGTaGTGGATCCCTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGTISIL*WIPGIF
Trigger: GAAAATGCCAGGGATCCACCACAAGATGGAGATGGT...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTAGGTTAAGCACTGGATaGAAAAGTTGGGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGRLSTG*KSWGQA
Trigger: AGCCTGTCCCCAACTTTTCCATCCAGTGCTTAACCT...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
3UTR CAA 72 bp GGGGTTCAGCTCAGACCTTGTGGCTTTTACAAAGCTTaGCGTTTAAACAAAGCCTCTGAAGTTCCTATTCTG +
Preference number: 4 (lower is better)
Translates to: GVQLRPCGFYKA*RLNKASEVPIL
Trigger: CAGAATAGGAACTTCAGAGGCTTTGTTTAAACGCAAAGCTTTGTAAAAGCCACAAGGTCTGAGCTGAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAGTGATTCAATTGCATTaGCGTCAAGGTGAGTTCATT +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETVIQLH*RQGEFI
Trigger: AATGAACTCACCTTGACGTCAATGCAATTGAATCAC...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGAAAGCAAACTGGGCTTaGGGCATAGTAACATGGCAA +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVKANWA*GIVTWQ
Trigger: TTGCCATGTTACTATGCCTCAAGCCCAGTTTGCTTT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAAACAATCTGGTGGGTGTaGAGCTGTGTATACACAGAG +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKTIWWV*SCVYTE
Trigger: CTCTGTGTATACACAGCTTCACACCCACCAGATTGT...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGAAACTAAAAATGAAGTaGTCGCATAGGCGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVKLKMK*SHRRQW
Trigger: CCACTGGCGCCTATGCGATCACTTCATTTTTAGTTT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGAGGAAGGTGCTTGTTaGCTGCTGATAATACTGGCG +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVEEGAC*LLIILA
Trigger: CGCCAGTATTATCAGCAGTCAACAAGCACCTTCCTC...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTATGTCGTATTACTTCTTaGGCAAGAGTAGAGTACTCA +
Preference number: 4 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLCRITS*ARVEYS
Trigger: TGAGTACTCTACTCTTGCTCAAGAAGTAATACGACA...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGCTTTCAGGTGCATCCTaGCACACAGGTGGCATAATC +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVLSGAS*HTGGII
Trigger: GATTATGCCACCTGTGTGTCAGGATGCACCTGAAAG...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGGATATAGTGAAGCATaGTCAGACTCTTTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIGYSEA*SDSFCL
Trigger: GAGGCAAAAAGAGTCTGAGCATGCTTCACTATATCC...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTCTCGTGGAACTGATGTaGAAACTCTTCTGCCACAAA +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGLVELM*KLFCHK
Trigger: TTTGTGGCAGAAGAGTTTGCACATCAGTTCCACGAG...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAATGCCGCTCCAGATTTTaGTCTTCTATGTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKCRSRF*SSMCSW
Trigger: CCAGGAACACATAGAAGAGCAAAATCTGGAGCGGCA...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR GCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCTGTGTCTGTAACACCTaGCGCTCCAGATTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFCVCNT*RSRFCS
Trigger: AGAGCAAAATCTGGAGCGGCAGGTGTTACAGACACA...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGGAATCCTTTGCTTCATaGATGGCACATTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQESFAS*MAHSHF
Trigger: AAAATGAGAATGTGCCATGCATGAAGCAAAGGATTC...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTCAATCCTACATTGGTTaGTCGCTGAATGACAACGGT +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGQSYIG*SLNDNG
Trigger: ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTG...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCTCCTCCTTCTGCTGTTaGGTGGTCAAGCCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFSSFCC*VVKPKS
Trigger: ACTTTTTGGCTTGACCACCCAACAGCAGAAGGAGGA...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGTAAGCAGTAGCGCATaGCTTTCTACGGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWVSSSA*LSTAAS
Trigger: AGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTAC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGGTACTGTGTCTTGGGTaGTGTGCTTTCGTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVVLCLG*CAFVFE
Trigger: CTCAAAAACGAAAGCACACCACCCAAGACACAGTAC...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAAACTGGATGGAAAAGTTaGGGACAGGCTACTGCAAGT +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKTGWKS*GQATAS
Trigger: ACTTGCAGTAGCCTGTCCCCAACTTTTCCATCCAGT...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGAGGTTAAGCACTGGATaGAAAAGTTGGGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWRLSTG*KSWGQA
Trigger: AGCCTGTCCCCAACTTTTCCATCCAGTGCTTAACCT...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAGTGATTCAATTGCATTaGCGTCAAGGTGAGTTCATT +
Preference number: 4 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSVIQLH*RQGEFI
Trigger: AATGAACTCACCTTGACGTCAATGCAATTGAATCAC...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR TCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACATTGGTTGCTCGCTaGATGACAACGGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFTLVAR*MTTVIQ
Trigger: TTGAATCACCGTTGTCATTCAGCGAGCAACCAATGT...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGACATTGGTTGCTCGCTaGATGACAACGGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWTLVAR*MTTVIQ
Trigger: TTGAATCACCGTTGTCATTCAGCGAGCAACCAATGT...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGTACACAGTACAAGGCTaGAGCACCTTTGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVYTVQG*STFDFS
Trigger: AGAAAAGTCAAAGGTGCTTCAGCCTTGTACTGTGTA...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCTTGGATGGTAAGGGATaGGCTACGTTTTTAAGTTAT +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLLDGKG*ATFLSY
Trigger: ATAACTTAAAAACGTAGCTCATCCCTTACCATCCAA...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCAGAGCAGATTTaGGGTACTCAGTGTGAAGTA +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFTPEQI*GTQCEV
Trigger: TACTTCACACTGAGTACCTCAAATCTGCTCTGGAGT...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCCTTTTGATGCTCTCTaGATACTCTTAAGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVPFDAL*ILLRVQ
Trigger: TTGCACCCTTAAGAGTATTCAGAGAGCATCAAAAGG...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCCTCGTGGAACTGATGTaGAAACTCTTCTGCCACAAA +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICLVELM*KLFCHK
Trigger: TTTGTGGCAGAAGAGTTTGCACATCAGTTCCACGAG...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGCTCGTGGAACTGATGTaGAAACTCTTCTGCCACAAA +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWLVELM*KLFCHK
Trigger: TTTGTGGCAGAAGAGTTTGCACATCAGTTCCACGAG...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGCCGCTCCAGATTTTaGTCTTCTATGTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWCRSRF*SSMCSW
Trigger: CCAGGAACACATAGAAGAGCAAAATCTGGAGCGGCA...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTCCTTCTGCTGTTGGGTaGTCAAGCCAAAAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCPSAVG*SSQKVA
Trigger: TGCAACTTTTTGGCTTGACCACCCAACAGCAGAAGG...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCTCTTTTCTTCGAAGTTaGGACTGTTGTTCATCTCAT +
Preference number: 4 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLSFLRS*DCCSSH
Trigger: ATGAGATGAACAACAGTCCCAACTTCGAAGAAAAGA...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACACAAGTAGGTTTTCAGTaGAGAAATCCAGTGAGATTT +
Preference number: 4 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETQVGFQ*RNPVRF
Trigger: AAATCTCACTGGATTTCTCCACTGAAAACCTACTTG...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGCTTGTGGTGGATCCCTaGCATTTTCTACACTTGTGT +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWLVVDP*HFLHLC
Trigger: ACACAAGTGTAGAAAATGCCAGGGATCCACCACAAG...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCATCTCCATCTTGTGGTaGATCCCTGGCATTTTCTAC +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFISILW*IPGIFY
Trigger: GTAGAAAATGCCAGGGATCCACCACAAGATGGAGAT...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATACTGGATGGAAAAGTTaGGGACAGGCTACTGCAAGT +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNTGWKS*GQATAS
Trigger: ACTTGCAGTAGCCTGTCCCCAACTTTTCCATCCAGT...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGACATTGGTTGCTCGCTaGATGACAACGGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVTLVAR*MTTVIQ
Trigger: TTGAATCACCGTTGTCATTCAGCGAGCAACCAATGT...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGAAAGCAAACTGGGCTTaGGGCATAGTAACATGGCAA +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWKANWA*GIVTWQ
Trigger: TTGCCATGTTACTATGCCTCAAGCCCAGTTTGCTTT...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAAGGCTGAAGCACCTTTaGCTTTTCTCTCAAAATTTA +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSRLKHL*LFSQNL
Trigger: TAAATTTTGAGAGAAAAGTCAAAGGTGCTTCAGCCT...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGTACACAGTACAAGGCTaGAGCACCTTTGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWYTVQG*STFDFS
Trigger: AGAAAAGTCAAAGGTGCTTCAGCCTTGTACTGTGTA...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTGTGTGCTTTCGTTTTTaGGACAGTTCTTACCTTTTT +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLVCFRF*DSSYLF
Trigger: AAAAAGGTAAGAACTGTCTCAAAAACGAAAGCACAC...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATACTCCAGAGCAGATTTaGGGTACTCAGTGTGAAGTA +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNTPEQI*GTQCEV
Trigger: TACTTCACACTGAGTACCTCAAATCTGCTCTGGAGT...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAGTCAAGCCAAAAAGTTaGAAAAACTCTAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSVKPKS*KNSSFS
Trigger: TGAGAAGCTAGAGTTTTTGCAACTTTTTGGCTTGAC...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCGGATATAGTGAAGCATaGTCAGACTCTTTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICGYSEA*SDSFCL
Trigger: GAGGCAAAAAGAGTCTGAGCATGCTTCACTATATCC...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATCTCGTGGAACTGATGTaGAAACTCTTCTGCCACAAA +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNLVELM*KLFCHK
Trigger: TTTGTGGCAGAAGAGTTTGCACATCAGTTCCACGAG...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCTCCTAGGACTTGTTaGTTTGAAGAAAATTTTGCA +
Preference number: 4 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIAPRTC*FEENFA
Trigger: TGCAAAATTTTCTTCAAAGCAACAAGTCCTAGGAGC...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATCTGTGGAGAGGAAGGTaGTTGTTGACTGCTGATAAT +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNLWRGR*LLTADN
Trigger: ATTATCAGCAGTCAACAAGCACCTTCCTCTCCACAG...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGCTGTGGAGAGGAAGGTaGTTGTTGACTGCTGATAAT +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVLWRGR*LLTADN
Trigger: ATTATCAGCAGTCAACAAGCACCTTCCTCTCCACAG...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCATCTTTTCTTCGAAGTTaGGACTGTTGTTCATCTCAT +
Preference number: 4 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSSFLRS*DCCSSH
Trigger: ATGAGATGAACAACAGTCCCAACTTCGAAGAAAAGA...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGGAGTTTGCTAATAACTaGAAGATTCTTGGCAGACGT +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVEFANN*KILGRR
Trigger: ACGTCTGCCAAGAATCTTCCAGTTATTAGCAAACTC...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGAAACTAATAGTTGGATaGGGAAACCATGACTGGGTA +
Preference number: 4 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVKLIVG*GNHDWV
Trigger: TACCCAGTCATGGTTTCCCCATCCAACTATTAGTTT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAGATAATTTACTATTaGAAGGTATCCCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLQIIYY*KVSLCR
Trigger: TCTGCAGAGGGATACCTTCCAATAGTAAATTATCTG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTCTTGTGGTGGATCCCTaGCATTTTCTACACTTGTGT +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCLVVDP*HFLHLC
Trigger: ACACAAGTGTAGAAAATGCCAGGGATCCACCACAAG...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGCTACCTTCAGTTTGTaGATTGGTTTTATCTTTAGG +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGATFSL*IGFIFR
Trigger: CCTAAAGATAAAACCAATTCACAAACTGAAGGTAGC...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTAGGCTGAAGCACCTTTaGCTTTTCTCTCAAAATTTA +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGRLKHL*LFSQNL
Trigger: TAAATTTTGAGAGAAAAGTCAAAGGTGCTTCAGCCT...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGAGTGGAGAAATCCAGTaGGATTTTGCCCTGATAGTT +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWSGEIQ*DFALIV
Trigger: AACTATCAGGGCAAAATCTCACTGGATTTCTCCACT...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGTTTTCTACACTTGTGTaGAACATGTGGCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVFSTLV*NMWLRE
Trigger: TTCCCTGAGCCACATGTTTCACACAAGTGTAGAAAA...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGCTCCTAGGACTTGTTaGTTTGAAGAAAATTTTGCA +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGAPRTC*FEENFA
Trigger: TGCAAAATTTTCTTCAAAGCAACAAGTCCTAGGAGC...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTTCTTTTCTTCGAAGTTaGGACTGTTGTTCATCTCAT +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGSFLRS*DCCSSH
Trigger: ATGAGATGAACAACAGTCCCAACTTCGAAGAAAAGA...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTCAAGTAGGTTTTCAGTaGAGAAATCCAGTGAGATTT +
Preference number: 4 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGQVGFQ*RNPVRF
Trigger: AAATCTCACTGGATTTCTCCACTGAAAACCTACTTG...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGTGATTCAATTGCATTaGCGTCAAGGTGAGTTCATT +
Preference number: 4 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVVIQLH*RQGEFI
Trigger: AATGAACTCACCTTGACGTCAATGCAATTGAATCAC...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTATAAGCCCTTTTTACTaGCAATGCACCCAACCTTTT +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCISPFY*QCTQPF
Trigger: AAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTAT...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCAGGCTGAAGCACCTTTaGCTTTTCTCTCAAAATTTA +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICRLKHL*LFSQNL
Trigger: TAAATTTTGAGAGAAAAGTCAAAGGTGCTTCAGCCT...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCTTGGATGGTAAGGGATaGGCTACGTTTTTAAGTTAT +
Preference number: 4 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFLDGKG*ATFLSY
Trigger: ATAACTTAAAAACGTAGCTCATCCCTTACCATCCAA...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR GCA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCGTCAAGCCAAAAAGTTaGAAAAACTCTAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICVKPKS*KNSSFS
Trigger: TGAGAAGCTAGAGTTTTTGCAACTTTTTGGCTTGAC...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR GCA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAAGAATCCTTTGCTTCATaGATGGCACATTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: SLESFASCMAHSHFVSFKESFAS*MAHSHF
Trigger: AAAATGAGAATGTGCCATGCATGAAGCAAAGGATTC...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGAGTTTGCTAATAACTaGAAGATTCTTGGCAGACGT +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCEFANN*KILGRR
Trigger: ACGTCTGCCAAGAATCTTCCAGTTATTAGCAAACTC...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGAAACTAATAGTTGGATaGGGAAACCATGACTGGGTA +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWKLIVG*GNHDWV
Trigger: TACCCAGTCATGGTTTCCCCATCCAACTATTAGTTT...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR TCA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGCTACCTTCAGTTTGTaGATTGGTTTTATCTTTAGG +
Preference number: 4 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCATFSL*IGFIFR
Trigger: CCTAAAGATAAAACCAATTCACAAACTGAAGGTAGC...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR TCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATGTGTGCTTTCGTTTTTaGGACAGTTCTTACCTTTTT +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNVCFRF*DSSYLF
Trigger: AAAAAGGTAAGAACTGTCTCAAAAACGAAAGCACAC...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATTCTTTTCTTCGAAGTTaGGACTGTTGTTCATCTCAT +
Preference number: 4 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNSFLRS*DCCSSH
Trigger: ATGAGATGAACAACAGTCCCAACTTCGAAGAAAAGA...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CCA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGCAGATAATTTACTATTaGAAGGTATCCCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWQIIYY*KVSLCR
Trigger: TCTGCAGAGGGATACCTTCCAATAGTAAATTATCTG...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS GCA 90 bp GCGCCGGGCGCCGGCTCCTGCTGCTGCAGGAACGGGAAGAAGGGCTaGGCCGGGGTCCCCGCGCCCGCCGCCGGCTGCTTCACCTGCAGC +
Preference number: 5 (lower is better)
Translates to: APGAGSCCCRNGKKG*AGVPAPAAGCFTCS
Trigger: GCTGCAGGTGAAGCAGCCGGCGGCGGGCGCGGGGACCCCGGCGCAGCCCTTCTTCCCGTTCCTGCAGCAGCAGGAGCCGGCGCCCGGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS TCA 90 bp CCTGCAGCTTCAGCTCCTTGCCGCGCCCGATGCCGCCGCCGCAGATaGAGCAGGAGAGCGGCGCGCCGCCCGCAGCCCGCTCGCCCACGG +
Preference number: 5 (lower is better)
Translates to: PAASAPCRARCRRRR*SRRAARRPQPARPR
Trigger: CCGTGGGCGAGCGGGCTGCGGGCGGCGCGCCGCTCTCCTGCTTCATCTGCGGCGGCGGCATCGGGCGCGGCAAGGAGCTGAAGCTGCAGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS TCA 90 bp CGCCACGGCGGCCGCCTGCGCCCGCGTCGCACTGGTGGGGCCGCTTaGGCCAGTACATGCGCTTGTCCACCGGCGTGCGGGCGCGCTCGA +
Preference number: 5 (lower is better)
Translates to: RHGGRLRPRRTGGAA*ASTCACPPACGRAR
Trigger: TCGAGCGCGCCCGCACGCCGGTGGACAAGCGCATGTACTGGCTCAAGCGGCCCCACCAGTGCGACGCGGGCGCAGGCGGCCGCCGTGGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CCA 90 bp GCCTCAGCTCCTGGGCCATCCTGGGGCCTCTGGGCAGGGTCTCCGTaGGGGCGCGTGGCCGGGTCTCGGACTCCCGGGTGGGAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: ASAPGPSWGLWAGSP*GRVAGSRTPGWEGG
Trigger: GCCACCCTCCCACCCGGGAGTCCGAGACCCGGCCACGCGCCCCCACGGAGACCCTGCCCAGAGGCCCCAGGATGGCCCAGGAGCTGAGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568080.1
ENST00000637419.1
CDS CCA 90 bp CGCCTGTTTGGCGAGCTTGCGCAGCGCGGCGGCAAAGCTGGAGGATaGCGCGGCCTGGGCCGACAGCGCGCTGCTGGTGGCGGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: RLFGELAQRGGKAGG*RGLGRQRAAGGGAA
Trigger: GGCAGCCCCGCCACCAGCAGCGCGCTGTCGGCCCAGGCCGCGCCATCCTCCAGCTTTGCCGCCGCGCTGCGCAAGCTCGCCAAACAGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000637419.1
CDS CCA 90 bp CTGGGCCATCCTGGGGCCTCTGGGCAGGGTCTCCGTGGGGGCGCGTaGCCGGGTCTCGGACTCCCGGGTGGGAGGGTGGCTGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LGHPGASGQGLRGGA*PGLGLPGGRVAGCR
Trigger: TCTGCAGCCAGCCACCCTCCCACCCGGGAGTCCGAGACCCGGCCACGCGCCCCCACGGAGACCCTGCCCAGAGGCCCCAGGATGGCCCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568080.1
ENST00000637419.1
CDS CCA 90 bp GCTCCTCCGCCTGTTTGGCGAGCTTGCGCAGCGCGGCGGCAAAGCTaGAGGATGGCGCGGCCTGGGCCGACAGCGCGCTGCTGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: APPPVWRACAARRQS*RMARPGPTARCWWR
Trigger: CCGCCACCAGCAGCGCGCTGTCGGCCCAGGCCGCGCCATCCTCCAGCTTTGCCGCCGCGCTGCGCAAGCTCGCCAAACAGGCGGAGGAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000637419.1
CDS GCA 90 bp ATGCGCTTGTCCACCGGCGTGCGGGCGCGCTCGAAGGCGGCCCACTaGTCGCCCAGGAAGCAGCGGCACACGGCGCACACCAACACGCAG +
Preference number: 5 (lower is better)
Translates to: MRLSTGVRARSKAAH*SPRKQRHTAHTNTQ
Trigger: CTGCGTGTTGGTGTGCGCCGTGTGCCGCTGCTTCCTGGGCGAGCAGTGGGCCGCCTTCGAGCGCGCCCGCACGCCGGTGGACAAGCGCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CCA 90 bp CGAAGGTGGCCGCCTGTGGGAGGGAGGCCCGCTGCTGGCCCAGGATaGTCTGGGTGGACTTCTCGAGCTCAGCCAGGAAGGGCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: RRWPPVGGRPAAGPG*SGWTSRAQPGRARA
Trigger: GGCCCGGGCCCTTCCTGGCTGAGCTCGAGAAGTCCACCCAGACCATCCTGGGCCAGCAGCGGGCCTCCCTCCCACAGGCGGCCACCTTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000479488.1
CDS GCA 90 bp TGCTCAGTGAGGACCCTCTGGGCTCCTCCGCCTGTTTGGCGAGCTTaGGCAGCGCGGCGGCAAAGCTGGAGGATGGCGCGGCCTGGGCCG +
Preference number: 5 (lower is better)
Translates to: CSVRTLWAPPPVWRA*AARRQSWRMARPGP
Trigger: CGGCCCAGGCCGCGCCATCCTCCAGCTTTGCCGCCGCGCTGCGCAAGCTCGCCAAACAGGCGGAGGAGCCCAGAGGGTCCTCACTGAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS GCA 90 bp GTGACGGTTTGGTCCTGGCCTGGTGGTGCTCTCCGGCCTGTGCTCTaGCTCCGCCGGCACCGGGGGCCGGCCCATATCCAGGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: VTVWSWPGGALRPVL*LRRHRGPAHIQVLL
Trigger: GAGCAGCACCTGGATATGGGCCGGCCCCCGGTGCCGGCGGAGGCAGAGCACAGGCCGGAGAGCACCACCAGGCCAGGACCAAACCGTCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS GCA 90 bp CCGCTGAGCTCCCCGAAGGTGGCCGCCTGTGGGAGGGAGGCCCGCTaGTGGCCCAGGATGGTCTGGGTGGACTTCTCGAGCTCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: PLSSPKVAACGREAR*WPRMVWVDFSSSAR
Trigger: CCTGGCTGAGCTCGAGAAGTCCACCCAGACCATCCTGGGCCAGCAGCGGGCCTCCCTCCCACAGGCGGCCACCTTCGGGGAGCTCAGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000479488.1
CDS CCA 90 bp GGCCCATGGGCACGCGCTTGGGTGTGCTGGCGGGGGAGCTGTGGTTaGTGGCCGGAGAGGACACGGGGGACGACTCGCTGCTCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: GPWARAWVCWRGSCG*WPERTRGTTRCSVR
Trigger: CCTCACTGAGCAGCGAGTCGTCCCCCGTGTCCTCTCCGGCCACCAACCACAGCTCCCCCGCCAGCACACCCAAGCGCGTGCCCATGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000411612.5
ENST00000635906.1
CDS CCA 90 bp GGGCTGGTGCTCCAGGCTCCCTCCCTCTCGTGGTGGCGGCGGAGGTaGCTGGTACTTGTCCAGAGGGGCAGGCTCACGCTTCCGTGGCCC +
Preference number: 5 (lower is better)
Translates to: GLVLQAPSLSWWRRR*LVLVQRGRLTLPWP
Trigger: GGGCCACGGAAGCGTGAGCCTGCCCCTCTGGACAAGTACCAGCCACCTCCGCCGCCACCACGAGAGGGAGGGAGCCTGGAGCACCAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 90 bp TCCTCCTCCCGGCTGCTCTGCAGACACTGTGCTGGCCTCAGCTCCTaGGCCATCCTGGGGCCTCTGGGCAGGGTCTCCGTGGGGGCGCGT +
Preference number: 5 (lower is better)
Translates to: SSSRLLCRHCAGLSS*AILGPLGRVSVGAR
Trigger: ACGCGCCCCCACGGAGACCCTGCCCAGAGGCCCCAGGATGGCCCAGGAGCTGAGGCCAGCACAGTGTCTGCAGAGCAGCCGGGAGGAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568080.1
ENST00000637419.1
CDS CCA 90 bp CCATGGGCACGCGCTTGGGTGTGCTGGCGGGGGAGCTGTGGTTGGTaGCCGGAGAGGACACGGGGGACGACTCGCTGCTCAGTGAGGACC +
Preference number: 5 (lower is better)
Translates to: PWARAWVCWRGSCGW*PERTRGTTRCSVRT
Trigger: GGTCCTCACTGAGCAGCGAGTCGTCCCCCGTGTCCTCTCCGGCCACCAACCACAGCTCCCCCGCCAGCACACCCAAGCGCGTGCCCATGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000411612.5
ENST00000635906.1
CDS CCA 90 bp ACCAGCGGCACGGCTGCCTGGCGGCTGGGCTCAAATGCAGCCGGGTaGCTGTGCAGAGAGTGGCTTTCGGCCCGCCGCGTCTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: TSGTAAWRLGSNAAG*LCREWLSARRVSKV
Trigger: CACCTTGGAGACGCGGCGGGCCGAAAGCCACTCTCTGCACAGCCACCCGGCTGCATTTGAGCCCAGCCGCCAGGCAGCCGTGCCGCTGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 90 bp TGGTGCTCCAGGCTCCCTCCCTCTCGTGGTGGCGGCGGAGGTGGCTaGTACTTGTCCAGAGGGGCAGGCTCACGCTTCCGTGGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: WCSRLPPSRGGGGGG*YLSRGAGSRFRGPS
Trigger: GGAGGGGCCACGGAAGCGTGAGCCTGCCCCTCTGGACAAGTACCAGCCACCTCCGCCGCCACCACGAGAGGGAGGGAGCCTGGAGCACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 90 bp GCCGGCAGCTCGGAGAGGGCAGGGTCGGAGGCGGAGAAGGCCTGGTaGTACCTGCCCAGGAAGCCCTGCACGGAGGTGATGAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: AGSSERAGSEAEKAW*YLPRKPCTEVMSSS
Trigger: CGAGGAGCTCATCACCTCCGTGCAGGGCTTCCTGGGCAGGTACCACCAGGCCTTCTCCGCCTCCGACCCTGCCCTCTCCGAGCTGCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CCA 90 bp GACGCCGGCAGCTCGGAGAGGGCAGGGTCGGAGGCGGAGAAGGCCTaGTGGTACCTGCCCAGGAAGCCCTGCACGGAGGTGATGAGCTCC +
Preference number: 5 (lower is better)
Translates to: DAGSSERAGSEAEKA*WYLPRKPCTEVMSS
Trigger: GGAGCTCATCACCTCCGTGCAGGGCTTCCTGGGCAGGTACCACCAGGCCTTCTCCGCCTCCGACCCTGCCCTCTCCGAGCTGCCGGCGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS TCA 90 bp CGCGCTGAGGCCAGACATGCGCTCCGAGTGCAGCGCTGCCAGGGATaGGTGGGAGAGCTCGGGAGGGTAGCGGACCCCAGAGAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: RAEARHALRVQRCQG*VGELGRVADPREVQ
Trigger: CTGCACCTCTCTGGGGTCCGCTACCCTCCCGAGCTCTCCCACTCATCCCTGGCAGCGCTGCACTCGGAGCGCATGTCTGGCCTCAGCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS GCA 90 bp TTGGAGATGAGGCTGGGCACCGTGTGGTGTGGGGTGGGCACCGGATaGAAGGGGTGTTGGACGGGCTTGGGCGCCTGCAGGCCGGCATCC +
Preference number: 5 (lower is better)
Translates to: LEMRLGTVWCGVGTG*KGCWTGLGACRPAS
Trigger: GGATGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCCGGTGCCCACCCCACACCACACGGTGCCCAGCCTCATCTCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS GCA 90 bp GGCACGGCTGCCTGGCGGCTGGGCTCAAATGCAGCCGGGTGGCTGTaGAGAGAGTGGCTTTCGGCCCGCCGCGTCTCCAAGGTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: GTAAWRLGSNAAGWL*REWLSARRVSKVLS
Trigger: GGACAACACCTTGGAGACGCGGCGGGCCGAAAGCCACTCTCTGCACAGCCACCCGGCTGCATTTGAGCCCAGCCGCCAGGCAGCCGTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 90 bp ATAGGGCCCATGGGCACGCGCTTGGGTGTGCTGGCGGGGGAGCTGTaGTTGGTGGCCGGAGAGGACACGGGGGACGACTCGCTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: IGPMGTRLGVLAGEL*LVAGEDTGDDSLLS
Trigger: ACTGAGCAGCGAGTCGTCCCCCGTGTCCTCTCCGGCCACCAACCACAGCTCCCCCGCCAGCACACCCAAGCGCGTGCCCATGGGCCCTAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000411612.5
ENST00000635906.1
CDS CCA 90 bp TCCGGGCAGAAGACCCGCTCCACCTTCACCAGCGGCACGGCTGCCTaGCGGCTGGGCTCAAATGCAGCCGGGTGGCTGTGCAGAGAGTGG +
Preference number: 5 (lower is better)
Translates to: SGQKTRSTFTSGTAA*RLGSNAAGWLCREW
Trigger: CCACTCTCTGCACAGCCACCCGGCTGCATTTGAGCCCAGCCGCCAGGCAGCCGTGCCGCTGGTGAAGGTGGAGCGGGTCTTCTGCCCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 90 bp ACGAACGTCTCCACCTGGTACTGCCGGGACCAGGCGCTGACAGCGTaGTGGGAGCTGCGGGCCTCATGCTGCAGCCACTGGGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: TNVSTWYCRDQALTA*WELRASCCSHWASR
Trigger: CCTGCTGGCCCAGTGGCTGCAGCATGAGGCCCGCAGCTCCCACCACGCTGTCAGCGCCTGGTCCCGGCAGTACCAGGTGGAGACGTTCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574293.1
ENST00000637419.1
CDS CCA 90 bp GCAGGGTCTCCGTGGGGGCGCGTGGCCGGGTCTCGGACTCCCGGGTaGGAGGGTGGCTGGCTGCAGATGCTTCCAGAGATCCACAAACAG +
Preference number: 5 (lower is better)
Translates to: AGSPWGRVAGSRTPG*EGGWLQMLPEIHKQ
Trigger: CTGTTTGTGGATCTCTGGAAGCATCTGCAGCCAGCCACCCTCCCACCCGGGAGTCCGAGACCCGGCCACGCGCCCCCACGGAGACCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568080.1
ENST00000637419.1
CDS-3UTR CAA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGCGGATGCAAGGGGTGTaGGACGGGCTTGGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: AARARAKGSAAGHSSEQPRMQGV*DGLGRL
Trigger: CAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCCG...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS GCA 90 bp CTGCAGCAGTGGCCGGGTCCAGGCCGAGGGGAGGCAGTGAGGACATaGGGAGGTCGTCGGTGGTGTGGTAGGGCCGGAAGCTTCTCAGGT +
Preference number: 5 (lower is better)
Translates to: LQQWPGPGRGEAVRT*GGRRWCGRAGSFSG
Trigger: ACCTGAGAAGCTTCCGGCCCTACCACACCACCGACGACCTCCGCATGTCCTCACTGCCTCCCCTCGGCCTGGACCCGGCCACTGCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000411612.5
ENST00000412692.5
CDS GCA 90 bp CCTTCAGCTTCTCTGCTCGGGTTGGGGTCAGCTGCTCCGAGGGCTTaGCCCGCTCCTCAGTGGCATGGCCACGCAGCCCATGCAGCTCGG +
Preference number: 5 (lower is better)
Translates to: PSASLLGLGSAAPRA*PAPQWHGHAAHAAR
Trigger: CCGAGCTGCATGGGCTGCGTGGCCATGCCACTGAGGAGCGGGGCAAGCCCTCGGAGCAGCTGACCCCAACCCGAGCAGAGAAGCTGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS GCA 90 bp GGGTCGGAGGCGGAGAAGGCCTGGTGGTACCTGCCCAGGAAGCCCTaGACGGAGGTGATGAGCTCCTCGTTCTGGCAGGCCCGGTACAGG +
Preference number: 5 (lower is better)
Translates to: GSEAEKAWWYLPRKP*TEVMSSSFWQARYR
Trigger: CCTGTACCGGGCCTGCCAGAACGAGGAGCTCATCACCTCCGTGCAGGGCTTCCTGGGCAGGTACCACCAGGCCTTCTCCGCCTCCGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS GCA 90 bp GGCGCGTGGCCGGGTCTCGGACTCCCGGGTGGGAGGGTGGCTGGCTaGAGATGCTTCCAGAGATCCACAAACAGGCTTCGTCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GAWPGLGLPGGRVAG*RCFQRSTNRLRRCC
Trigger: GCAGCAGCGACGAAGCCTGTTTGTGGATCTCTGGAAGCATCTGCAGCCAGCCACCCTCCCACCCGGGAGTCCGAGACCCGGCCACGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CCA 90 bp CTGGGCACCGTGTGGTGTGGGGTGGGCACCGGATGCAAGGGGTGTTaGACGGGCTTGGGCGCCTGCAGGCCGGCATCCTTCAGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LGTVWCGVGTGCKGC*TGLGACRPASFSFS
Trigger: AGAGAAGCTGAAGGATGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCCGGTGCCCACCCCACACCACACGGTGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 90 bp TTCTCCCCGCTGGCAGGAGCTAGCTCCTGGACTCTCGACAGCTCCTaGGGCCGGACCTGTTCCAGCTTCCCAGGCTCCGCGGCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: FSPLAGASSWTLDSS*GRTCSSFPGSAAFG
Trigger: CCCAAAGGCCGCGGAGCCTGGGAAGCTGGAACAGGTCCGGCCCCAGGAGCTGTCGAGAGTCCAGGAGCTAGCTCCTGCCAGCGGGGAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS CCA 90 bp AAGGTCTGGTCCGTCCTCCTCCCGGCTGCTCTGCAGACACTGTGCTaGCCTCAGCTCCTGGGCCATCCTGGGGCCTCTGGGCAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: KVWSVLLPAALQTLC*PQLLGHPGASGQGL
Trigger: GAGACCCTGCCCAGAGGCCCCAGGATGGCCCAGGAGCTGAGGCCAGCACAGTGTCTGCAGAGCAGCCGGGAGGAGGACGGACCAGACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568080.1
ENST00000637419.1
CDS CCA 90 bp TGGGGGCGCGTGGCCGGGTCTCGGACTCCCGGGTGGGAGGGTGGCTaGCTGCAGATGCTTCCAGAGATCCACAAACAGGCTTCGTCGCTG +
Preference number: 5 (lower is better)
Translates to: WGRVAGSRTPGWEGG*LQMLPEIHKQASSL
Trigger: CAGCGACGAAGCCTGTTTGTGGATCTCTGGAAGCATCTGCAGCCAGCCACCCTCCCACCCGGGAGTCCGAGACCCGGCCACGCGCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS TCA 90 bp AGAAGCACACGAACGTCTCCACCTGGTACTGCCGGGACCAGGCGCTaGCAGCGTGGTGGGAGCTGCGGGCCTCATGCTGCAGCCACTGGG +
Preference number: 5 (lower is better)
Translates to: RSTRTSPPGTAGTRR*QRGGSCGPHAAATG
Trigger: CCCAGTGGCTGCAGCATGAGGCCCGCAGCTCCCACCACGCTGTCAGCGCCTGGTCCCGGCAGTACCAGGTGGAGACGTTCGTGTGCTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574293.1
ENST00000637419.1
CDS GCA 90 bp TTTCTCCGGGCAGAAGACCCGCTCCACCTTCACCAGCGGCACGGCTaGCTGGCGGCTGGGCTCAAATGCAGCCGGGTGGCTGTGCAGAGA +
Preference number: 5 (lower is better)
Translates to: FLRAEDPLHLHQRHG*LAAGLKCSRVAVQR
Trigger: TCTCTGCACAGCCACCCGGCTGCATTTGAGCCCAGCCGCCAGGCAGCCGTGCCGCTGGTGAAGGTGGAGCGGGTCTTCTGCCCGGAGAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 90 bp TGTGGTGTGGGGTGGGCACCGGATGCAAGGGGTGTTGGACGGGCTTaGGCGCCTGCAGGCCGGCATCCTTCAGCTTCTCTGCTCGGGTTG +
Preference number: 5 (lower is better)
Translates to: CGVGWAPDARGVGRA*APAGRHPSASLLGL
Trigger: CAACCCGAGCAGAGAAGCTGAAGGATGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCCGGTGCCCACCCCACACCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 90 bp GCCTGGCGGCTGGGCTCAAATGCAGCCGGGTGGCTGTGCAGAGAGTaGCTTTCGGCCCGCCGCGTCTCCAAGGTGTTGTCCATCAGGGAC +
Preference number: 5 (lower is better)
Translates to: AWRLGSNAAGWLCRE*LSARRVSKVLSIRD
Trigger: GTCCCTGATGGACAACACCTTGGAGACGCGGCGGGCCGAAAGCCACTCTCTGCACAGCCACCCGGCTGCATTTGAGCCCAGCCGCCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 90 bp AGAAGACCCGCTCCACCTTCACCAGCGGCACGGCTGCCTGGCGGCTaGGCTCAAATGCAGCCGGGTGGCTGTGCAGAGAGTGGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: RRPAPPSPAARLPGG*AQMQPGGCAESGFR
Trigger: CCGAAAGCCACTCTCTGCACAGCCACCCGGCTGCATTTGAGCCCAGCCGCCAGGCAGCCGTGCCGCTGGTGAAGGTGGAGCGGGTCTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 90 bp GCAGACACCAGGCTTCCCTGGGATCCATGGCTCCCAGTAGCTGGGTaGTCCCCTGGGCTGACAAGACCTCCCTCCTCCCCCTGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: ADTRLPWDPWLPVAG*SPGLTRPPSSPWQG
Trigger: TCCCTGCCAGGGGGAGGAGGGAGGTCTTGTCAGCCCAGGGGACCACCCAGCTACTGGGAGCCATGGATCCCAGGGAAGCCTGGTGTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS CCA 90 bp GACCGCAGACACCAGGCTTCCCTGGGATCCATGGCTCCCAGTAGCTaGGTGGTCCCCTGGGCTGACAAGACCTCCCTCCTCCCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: DRRHQASLGSMAPSS*VVPWADKTSLLPLA
Trigger: TGCCAGGGGGAGGAGGGAGGTCTTGTCAGCCCAGGGGACCACCCAGCTACTGGGAGCCATGGATCCCAGGGAAGCCTGGTGTCTGCGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS CCA 90 bp CCTCCTGGGGTCCTCGAAGTGTGGGCCGTAGCTGGCTGCGCCTGGTaGGAGAAGAGCTTCATGGGGCGAACCCGCCAGGACTTCGGAGGA +
Preference number: 5 (lower is better)
Translates to: PPGVLEVWAVAGCAW*EKSFMGRTRQDFGG
Trigger: TCCTCCGAAGTCCTGGCGGGTTCGCCCCATGAAGCTCTTCTCCCACCAGGCGCAGCCAGCTACGGCCCACACTTCGAGGACCCCAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469381.1
ENST00000479488.1
CDS CCA 90 bp AAGCCACTGGCAGTGGTATGCTTGCACTGTCCCGGGGTCCCCTCCTaGGGTCCTCGAAGTGTGGGCCGTAGCTGGCTGCGCCTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: KPLAVVCLHCPGVPS*GPRSVGRSWLRLVG
Trigger: TCCCACCAGGCGCAGCCAGCTACGGCCCACACTTCGAGGACCCCAGGAGGGGACCCCGGGACAGTGCAAGCATACCACTGCCAGTGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469381.1
ENST00000479488.1
CDS CCA 90 bp GGGGGCGTGGCTGTCCAGGGGCACCACATAGAGTCGCTGCAGGACTaGCACGTTGGCCAGCTCGAAGCTCTGCCACTGCTGCGTGAGGGA +
Preference number: 5 (lower is better)
Translates to: GGVAVQGHHIESLQD*HVGQLEALPLLREG
Trigger: TCCCTCACGCAGCAGTGGCAGAGCTTCGAGCTGGCCAACGTGCCAGTCCTGCAGCGACTCTATGTGGTGCCCCTGGACAGCCACGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS TCA 90 bp TCTCCTGGGCCTCCCGCCGCCTGCGCTCCTCCAGGTCCAGCTTGCTaGCCAGCCTCCGGCGCTGCTGCAGGAACTCATCATAGATGTAGG +
Preference number: 5 (lower is better)
Translates to: SPGPPAACAPPGPAC*PASGAAAGTHHRCR
Trigger: CCTACATCTATGATGAGTTCCTGCAGCAGCGCCGGAGGCTGGTCAGCAAGCTGGACCTGGAGGAGCGCAGGCGGCGGGAGGCCCAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000479488.1
CDS TCA 90 bp GCAGGACTGGCACGTTGGCCAGCTCGAAGCTCTGCCACTGCTGCGTaGGGGAGGAGAAGCAGCTGGCGCACACCAAGGTACTGCCGCCCT +
Preference number: 5 (lower is better)
Translates to: AGLARWPARSSATAA*GRRSSWRTPRYCRP
Trigger: AGGGCGGCAGTACCTTGGTGTGCGCCAGCTGCTTCTCCTCCCTCACGCAGCAGTGGCAGAGCTTCGAGCTGGCCAACGTGCCAGTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS GCA 90 bp GTACTTGTCCAGAGGGGCAGGCTCACGCTTCCGTGGCCCCTCCTCTaGTTTCTCCGGGCAGAAGACCCGCTCCACCTTCACCAGCGGCAC +
Preference number: 5 (lower is better)
Translates to: VLVQRGRLTLPWPLL*FLRAEDPLHLHQRH
Trigger: GTGCCGCTGGTGAAGGTGGAGCGGGTCTTCTGCCCGGAGAAAGCAGAGGAGGGGCCACGGAAGCGTGAGCCTGCCCCTCTGGACAAGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS GCA 90 bp CGCTGCAGGACTGGCACGTTGGCCAGCTCGAAGCTCTGCCACTGCTaGGTGAGGGAGGAGAAGCAGCTGGCGCACACCAAGGTACTGCCG +
Preference number: 5 (lower is better)
Translates to: RCRTGTLASSKLCHC*VREEKQLAHTKVLP
Trigger: CGGCAGTACCTTGGTGTGCGCCAGCTGCTTCTCCTCCCTCACGCAGCAGTGGCAGAGCTTCGAGCTGGCCAACGTGCCAGTCCTGCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CCA 90 bp AGCCGCCGCTGCCGCGCCAGCCACTTCTCCTCCTCATTGGTGCGCTaGATCAGCAGGGCTGTGGCAGCACTGCTGCTAGGCAGAGAGAAG +
Preference number: 5 (lower is better)
Translates to: SRRCRASHFSSSLVR*ISRAVAALLLGREK
Trigger: CTTCTCTCTGCCTAGCAGCAGTGCTGCCACAGCCCTGCTGATCCAGCGCACCAATGAGGAGGAGAAGTGGCTGGCGCGGCAGCGGCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 90 bp CGGAGGTGGCTGGTACTTGTCCAGAGGGGCAGGCTCACGCTTCCGTaGCCCCTCCTCTGCTTTCTCCGGGCAGAAGACCCGCTCCACCTT +
Preference number: 5 (lower is better)
Translates to: RRWLVLVQRGRLTLP*PLLCFLRAEDPLHL
Trigger: AAGGTGGAGCGGGTCTTCTGCCCGGAGAAAGCAGAGGAGGGGCCACGGAAGCGTGAGCCTGCCCCTCTGGACAAGTACCAGCCACCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 90 bp CTGGGGCTTTGCAGGACCGCAGACACCAGGCTTCCCTGGGATCCATaGCTCCCAGTAGCTGGGTGGTCCCCTGGGCTGACAAGACCTCCC +
Preference number: 5 (lower is better)
Translates to: LGLCRTADTRLPWDP*LPVAGWSPGLTRPP
Trigger: GGGAGGTCTTGTCAGCCCAGGGGACCACCCAGCTACTGGGAGCCATGGATCCCAGGGAAGCCTGGTGTCTGCGGTCCTGCAAAGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS TCA 90 bp CGGGTAGACAGCGCCAGTCTCGGTGAAGGCGTCTGCCGCTTGCTCTaGATTGTTGGGGGCGACGGGCTTCTCTCTCGCAGCATCCTCCGC +
Preference number: 5 (lower is better)
Translates to: RVDSASLGEGVCRLL*IVGGDGLLSRSILR
Trigger: GCGGAGGATGCTGCGAGAGAGAAGCCCGTCGCCCCCAACAATTCAGAGCAAGCGGCAGACGCCTTCACCGAGACTGGCGCTGTCTACCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
CDS GCA 90 bp CAAGGTGTTGTCCATCAGGGACACGGGGTTCCAGAGGGCCGTGGGTaGAGCATGGAGCTGGGGCTTGGGCGAAATCAGAGGTGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: QGVVHQGHGVPEGRG*SMELGLGRNQRWWP
Trigger: GGGCCACCACCTCTGATTTCGCCCAAGCCCCAGCTCCATGCTGCACCCACGGCCCTCTGGAACCCCGTGTCCCTGATGGACAACACCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS GCA 90 bp GCCAACATGGGGAAACCCCATCGCCACGCTGTGGGAGAGCTGCTCTaGCGTCAGGCTGAGGCTGTAGTGCCGGGCCTCCAGTCGTCTACA +
Preference number: 5 (lower is better)
Translates to: ANMGKPHRHAVGELL*RQAEAVVPGLQSST
Trigger: TGTAGACGACTGGAGGCCCGGCACTACAGCCTCAGCCTGACGGCAGAGCAGCTCTCCCACAGCGTGGCGATGGGGTTTCCCCATGTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS CCA 90 bp AGAGAAGATGCCATGGTTGGAGATGAGGCTGGGCACCGTGTGGTGTaGGGTGGGCACCGGATGCAAGGGGTGTTGGACGGGCTTGGGCGC +
Preference number: 5 (lower is better)
Translates to: REDAMVGDEAGHRVV*GGHRMQGVLDGLGR
Trigger: GCGCCCAAGCCCGTCCAACACCCCTTGCATCCGGTGCCCACCCCACACCACACGGTGCCCAGCCTCATCTCCAACCATGGCATCTTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 90 bp CAGGCTTCCCTGGGATCCATGGCTCCCAGTAGCTGGGTGGTCCCCTaGGCTGACAAGACCTCCCTCCTCCCCCTGGCAGGGAACCATTCA +
Preference number: 5 (lower is better)
Translates to: QASLGSMAPSSWVVP*ADKTSLLPLAGNHS
Trigger: TGAATGGTTCCCTGCCAGGGGGAGGAGGGAGGTCTTGTCAGCCCAGGGGACCACCCAGCTACTGGGAGCCATGGATCCCAGGGAAGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS CCA 90 bp AACCCAGTCCTGGGGCTTTGCAGGACCGCAGACACCAGGCTTCCCTaGGATCCATGGCTCCCAGTAGCTGGGTGGTCCCCTGGGCTGACA +
Preference number: 5 (lower is better)
Translates to: NPVLGLCRTADTRLP*DPWLPVAGWSPGLT
Trigger: TGTCAGCCCAGGGGACCACCCAGCTACTGGGAGCCATGGATCCCAGGGAAGCCTGGTGTCTGCGGTCCTGCAAAGCCCCAGGACTGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS CCA 90 bp TACCTGCCCAGGAAGCCCTGCACGGAGGTGATGAGCTCCTCGTTCTaGCAGGCCCGGTACAGGGCCCAGACATCCTCCAGGACGCTGAAG +
Preference number: 5 (lower is better)
Translates to: YLPRKPCTEVMSSSF*QARYRAQTSSRTLK
Trigger: CTTCAGCGTCCTGGAGGATGTCTGGGCCCTGTACCGGGCCTGCCAGAACGAGGAGCTCATCACCTCCGTGCAGGGCTTCCTGGGCAGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS-3UTR CAA 90 bp CCTGGGATATCCCTTCAGGTAGCCCCTAGGCCAGTGCATTGCAGGCAAGGCAAGGGCTCCTGCTGCCCATaGTGCTGGGGTGGAGGGGCG +
Preference number: 5 (lower is better)
Translates to: PGISLQVAPRPVHCRQGKGSCCP*CWGGGA
Trigger: CGCCCCTCCACCCCAGCACAATGGGCAGCAGGAGCC...CTTGCCTTGCCTGCAATGCACTGGCCTAGGGGCTACCTGAAGGGATATCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CAA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGCCTTGCCACTTGCGCTaGGGGACTTCCTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: AARARAKGSAAGHSSEQPPCHLR*GTSSSS
Trigger: AGATGAGGAGGAAGTCCCCAAGCGCAAGTGGCAAGG...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS GCA 90 bp CTGTTTCTGGCTCCTCAACTCCGCCACGCTGTGGGAGAGCTGCTCTaGCGTCAGGCTGAGGCTGTAGTGCCGGGCCTCCAGTCGTCTACA +
Preference number: 5 (lower is better)
Translates to: LFLAPQLRHAVGELL*RQAEAVVPGLQSST
Trigger: TGTAGACGACTGGAGGCCCGGCACTACAGCCTCAGCCTGACGGCAGAGCAGCTCTCCCACAGCGTGGCGGAGTTGAGGAGCCAGAAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000469381.1
ENST00000496345.1
CDS GCA 90 bp AGGCCTGGGGCTGTGTCCACGGCAACACAGGGCTGCTTGTGCACATaGACTCCCCCATGCTGTGGCCATCTGAGTCCATCTCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: RPGAVSTATQGCLCT*TPPCCGHLSPSPGR
Trigger: CCTCCCAGGAGATGGACTCAGATGGCCACAGCATGGGGGAGTGCATGTGCACAAGCAGCCCTGTGTTGCCGTGGACACAGCCCCAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS GCA 90 bp AGTCGCTGCAGGACTGGCACGTTGGCCAGCTCGAAGCTCTGCCACTaGTGCGTGAGGGAGGAGAAGCAGCTGGCGCACACCAAGGTACTG +
Preference number: 5 (lower is better)
Translates to: SRCRTGTLASSKLCH*CVREEKQLAHTKVL
Trigger: CAGTACCTTGGTGTGCGCCAGCTGCTTCTCCTCCCTCACGCAGCAGTGGCAGAGCTTCGAGCTGGCCAACGTGCCAGTCCTGCAGCGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CCA 90 bp CTCCTGGGGCCGGACCTGTTCCAGCTTCCCAGGCTCCGCGGCCTTTaGGATGTCAGACAAGGAAGCAGCAACACCAACCGGCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LLGPDLFQLPRLRGL*DVRQGSSNTNRLLH
Trigger: GTGGAGAAGCCGGTTGGTGTTGCTGCTTCCTTGTCTGACATCCCAAAGGCCGCGGAGCCTGGGAAGCTGGAACAGGTCCGGCCCCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS CCA 90 bp GACCTCCCTCCTCCCCCTGGCAGGGAACCATTCATCACACAGGCCTaGGGCTGTGTCCACGGCAACACAGGGCTGCTTGTGCACATGCAC +
Preference number: 5 (lower is better)
Translates to: DLPPPPGREPFITQA*GCVHGNTGLLVHMH
Trigger: GTGCATGTGCACAAGCAGCCCTGTGTTGCCGTGGACACAGCCCCAGGCCTGTGTGATGAATGGTTCCCTGCCAGGGGGAGGAGGGAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS TCA 90 bp CTTGGCCCGCACACACCAGGGTCCCACACTCCACGCAAGCACCGATaGTCAGCTGCTGTCCGTCATCCACCAACAGGCTGTGGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: LGPHTPGSHTPRKHR*SAAVRHPPTGCGLL
Trigger: GAGCAAGCCACAGCCTGTTGGTGGATGACGGACAGCAGCTGATCATCGGTGCTTGCGTGGAGTGTGGGACCCTGGTGTGTGCGGGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574293.1
ENST00000637419.1
CDS GCA 90 bp ACTCTTCTGCCACAAAGGGCTCCCACGGCTTGCTCTTCCCATTGGTaGTGTGGGACAGCGGCACAGGAATGTCCTTGGGTGCAGCGCCCC +
Preference number: 5 (lower is better)
Translates to: TLLPQRAPTACSSHW*CGTAAQECPWVQRP
Trigger: GGGGCGCTGCACCCAAGGACATTCCTGTGCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGCCGTGGGAGCCCTTTGTGGCAGAAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS GCA 90 bp TGCCCGCAGGGCCTCATGTGTGCAGAGCACCTATCAGGCCAGGCCTaGTGGCACCTGAACACCCTGAAGGCCAGTTCCTTTCAACCGAGG +
Preference number: 5 (lower is better)
Translates to: CPQGLMCAEHLSGQA*WHLNTLKASSFQPR
Trigger: CCTCGGTTGAAAGGAACTGGCCTTCAGGGTGTTCAGGTGCCAGCAGGCCTGGCCTGATAGGTGCTCTGCACACATGAGGCCCTGCGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS GCA 90 bp GAACCCGCCAGGACTTCGGAGGAACCTAGCAACAGTGGGGTGGACTaGAGGGTGTGGACGCTAGGAACGAGAGCCCAGCCCAGAGCATGT +
Preference number: 5 (lower is better)
Translates to: EPARTSEEPSNSGVD*RVWTLGTRAQPRAC
Trigger: ACATGCTCTGGGCTGGGCTCTCGTTCCTAGCGTCCACACCCTGCAGTCCACCCCACTGTTGCTAGGTTCCTCCGAAGTCCTGGCGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469381.1
ENST00000479488.1
CDS GCA 90 bp CTCCTCTTCACACCCTGCCCAGCAGAGCCCAAAACCTCTCTCCAGTaGAGCCAGCGAAGGCCTCTCCTGTGGACCACAATGCTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: LLFTPCPAEPKTSLQ*SQRRPLLWTTMLPA
Trigger: GGCTGGGAGCATTGTGGTCCACAGGAGAGGCCTTCGCTGGCTGCACTGGAGAGAGGTTTTGGGCTCTGCTGGGCAGGGTGTGAAGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496345.1
CDS GCA 90 bp GCACACACCAGGGTCCCACACTCCACGCAAGCACCGATGATCAGCTaGTGTCCGTCATCCACCAACAGGCTGTGGCTTGCTCGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: AHTRVPHSTQAPMIS*CPSSTNRLWLARRV
Trigger: CACCCTGCGAGCAAGCCACAGCCTGTTGGTGGATGACGGACAGCAGCTGATCATCGGTGCTTGCGTGGAGTGTGGGACCCTGGTGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574293.1
ENST00000637419.1
CDS CCA 90 bp TCTGCCACAAAGGGCTCCCACGGCTTGCTCTTCCCATTGGTGCTGTaGGACAGCGGCACAGGAATGTCCTTGGGTGCAGCGCCCCGGATA +
Preference number: 5 (lower is better)
Translates to: SATKGSHGLLFPLVL*DSGTGMSLGAAPRI
Trigger: TATCCGGGGCGCTGCACCCAAGGACATTCCTGTGCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGCCGTGGGAGCCCTTTGTGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS CCA 90 bp CAAGCACCGATGATCAGCTGCTGTCCGTCATCCACCAACAGGCTGTaGCTTGCTCGCAGGGTGTATAGGAACAGGGGCAGCCGGGCCACC +
Preference number: 5 (lower is better)
Translates to: QAPMISCCPSSTNRL*LARRVYRNRGSRAT
Trigger: GGTGGCCCGGCTGCCCCTGTTCCTATACACCCTGCGAGCAAGCCACAGCCTGTTGGTGGATGACGGACAGCAGCTGATCATCGGTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574293.1
ENST00000637419.1
CDS-3UTR CAA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGTCCAGGGAAAAGCCTTaGGGTTGCTTTGTGTGCTCC +
Preference number: 5 (lower is better)
Translates to: AARARAKGSAAGHSSEQPSREKP*GCFVCS
Trigger: GGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGA...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS TCA 90 bp GTTCATCTCATCAGGGCTGTAGCGGGTAGACAGCGCCAGTCTCGGTaGAGGCGTCTGCCGCTTGCTCTGAATTGTTGGGGGCGACGGGCT +
Preference number: 5 (lower is better)
Translates to: VHLIRAVAGRQRQSR*RRLPLALNCWGRRA
Trigger: AGCCCGTCGCCCCCAACAATTCAGAGCAAGCGGCAGACGCCTTCACCGAGACTGGCGCTGTCTACCCGCTACAGCCCTGATGAGATGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
CDS TCA 90 bp TCCTCAACTCCGCCACGCTGTGGGAGAGCTGCTCTGCCGTCAGGCTaGGGCTGTAGTGCCGGGCCTCCAGTCGTCTACATTGTGTCTGTA +
Preference number: 5 (lower is better)
Translates to: SSTPPRCGRAALPSG*GCSAGPPVVYIVSV
Trigger: TACAGACACAATGTAGACGACTGGAGGCCCGGCACTACAGCCTCAGCCTGACGGCAGAGCAGCTCTCCCACAGCGTGGCGGAGTTGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000469381.1
ENST00000496345.1
CDS TCA 90 bp GAAACCCCATCGCCACGCTGTGGGAGAGCTGCTCTGCCGTCAGGCTaGGGCTGTAGTGCCGGGCCTCCAGTCGTCTACATTGTGTCTGTA +
Preference number: 5 (lower is better)
Translates to: ETPSPRCGRAALPSG*GCSAGPPVVYIVSV
Trigger: TACAGACACAATGTAGACGACTGGAGGCCCGGCACTACAGCCTCAGCCTGACGGCAGAGCAGCTCTCCCACAGCGTGGCGATGGGGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS TCA 90 bp AGACGTGCTCCAAAGACAGCTGTCCGTGCGGTGACGACGCCTCTGTaGATCACTGTGCCCACGGACCTCGGTGGTGACGTGCGAGGATGT +
Preference number: 5 (lower is better)
Translates to: RRAPKTAVRAVTTPL*ITVPTDLGGDVRGC
Trigger: ACATCCTCGCACGTCACCACCGAGGTCCGTGGGCACAGTGATTCACAGAGGCGTCGTCACCGCACGGACAGCTGTCTTTGGAGCACGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495192.1
CDS GCA 90 bp AAAAACTCTAGCTTCTCAGAGGACGTGTCCAGTTTGAGGGGCGGCTaGTCGGCCACGCAACGGAGGTGGGCCCTGACCTCCTCCTCATCG +
Preference number: 5 (lower is better)
Translates to: KNSSFSEDVSSLRGG*SATQRRWALTSSSS
Trigger: CGATGAGGAGGAGGTCAGGGCCCACCTCCGTTGCGTGGCCGAGCAGCCGCCCCTCAAACTGGACACGTCCTCTGAGAAGCTAGAGTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS GCA 90 bp GTGTCCACGGCAACACAGGGCTGCTTGTGCACATGCACTCCCCCATaGTGTGGCCATCTGAGTCCATCTCCTGGGAGGAGACAGGCACAC +
Preference number: 5 (lower is better)
Translates to: VSTATQGCLCTCTPP*CGHLSPSPGRRQAH
Trigger: GTGTGCCTGTCTCCTCCCAGGAGATGGACTCAGATGGCCACAGCATGGGGGAGTGCATGTGCACAAGCAGCCCTGTGTTGCCGTGGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS GCA 90 bp AGAGCCTTCATCTGTCCAGTGGACATGCCCGCAGGGCCTCATGTGTaGAGAGCACCTATCAGGCCAGGCCTGCTGGCACCTGAACACCCT +
Preference number: 5 (lower is better)
Translates to: RAFICPVDMPAGPHV*RAPIRPGLLAPEHP
Trigger: AGGGTGTTCAGGTGCCAGCAGGCCTGGCCTGATAGGTGCTCTGCACACATGAGGCCCTGCGGGCATGTCCACTGGACAGATGAAGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS GCA 90 bp CAGGGTCTTAGTGGCTCTGCCAGAGGGAGGCCCTTTCATGCCGTCTaGAGGGGCCTCTTGGACAAGAGGGCCTTGCCAGGGATCCTGAAT +
Preference number: 5 (lower is better)
Translates to: QGLSGSARGRPFHAV*RGLLDKRALPGILN
Trigger: ATTCAGGATCCCTGGCAAGGCCCTCTTGTCCAAGAGGCCCCTGCAGACGGCATGAAAGGGCCTCCCTCTGGCAGAGCCACTAAGACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CCA 90 bp CACGGCAACACAGGGCTGCTTGTGCACATGCACTCCCCCATGCTGTaGCCATCTGAGTCCATCTCCTGGGAGGAGACAGGCACACACAGG +
Preference number: 5 (lower is better)
Translates to: HGNTGLLVHMHSPML*PSESISWEETGTHR
Trigger: CCTGTGTGTGCCTGTCTCCTCCCAGGAGATGGACTCAGATGGCCACAGCATGGGGGAGTGCATGTGCACAAGCAGCCCTGTGTTGCCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS CCA 90 bp CTCTCTCTCCGACCAGCGCCCAGGCAATTTCGGCCACCTTGGCCCTaGCAGATCCACAATGAGGTAATTGACGACCAAGGACGGGCCGGA +
Preference number: 5 (lower is better)
Translates to: LSLRPAPRQFRPPWP*QIHNEVIDDQGRAG
Trigger: TCCGGCCCGTCCTTGGTCGTCAATTACCTCATTGTGGATCTGCCAGGGCCAAGGTGGCCGAAATTGCCTGGGCGCTGGTCGGAGAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635906.1
CDS CCA 90 bp GGCTGTCCTGGAGAGCCCGGGGGACACGGCCACTGTTCTTCTCTTTaGGGTTGCAGACGCCTGGGAAAGGCTGTTCCTTGTGGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: GCPGEPGGHGHCSSL*GCRRLGKAVPCGPL
Trigger: AAGAGGACCACAAGGAACAGCCTTTCCCAGGCGTCTGCAACCCCAAAGAGAAGAACAGTGGCCGTGTCCCCCGGGCTCTCCAGGACAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS-3UTR CAA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAGGCTTGCTCTTCCCATaGGTGCTGTGGGACAGCGGC +
Preference number: 5 (lower is better)
Translates to: GADKATRCQLPASCSAQQGLLFP*VLWDSG
Trigger: GCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGCC...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAAACGGCCTCGATCCCTaGCCACTTGCGCTTGGGGAC +
Preference number: 5 (lower is better)
Translates to: GADKATRCQLPASCSAQQNGLDP*PLALGD
Trigger: GTCCCCAAGCGCAAGTGGCAAGGGATCGAGGCCGTT...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGACTGGGTACTGTGTCTaGGGTGGTGTGCTTTCGTTT +
Preference number: 5 (lower is better)
Translates to: AARARAKGSAAGHSSEQPTGYCV*GGVLSF
Trigger: AAACGAAAGCACACCACCCAAGACACAGTACCCAGT...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS CCA 90 bp CAAACTCTTCTGCCACAAAGGGCTCCCACGGCTTGCTCTTCCCATTaGTGCTGTGGGACAGCGGCACAGGAATGTCCTTGGGTGCAGCGC +
Preference number: 5 (lower is better)
Translates to: QTLLPQRAPTACSSH*CCGTAAQECPWVQR
Trigger: GCGCTGCACCCAAGGACATTCCTGTGCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGCCGTGGGAGCCCTTTGTGGCAGAAGAGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS-3UTR CAA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACCCCATGGGCACGCGCTaGGGTGTGCTGGCGGGGGAG +
Preference number: 5 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNPMGTR*GVLAGE
Trigger: CTCCCCCGCCAGCACACCCAAGCGCGTGCCCATGGG...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR CAA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACGGGTGTTGGACGGGCTaGGGCGCCTGCAGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNGCWTG*GACRPA
Trigger: TGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACCC...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCCGCGTCTCCAAGGTGTaGTCCATCAGGGACACGGGG +
Preference number: 5 (lower is better)
Translates to: PLVRALGSKRGLLDLNTARVSKV*SIRDTG
Trigger: CCCCGTGTCCCTGATGGACAACACCTTGGAGACGCG...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAATCCTCCAGGTCCAGCTaGCTGACCAGCCTCCGGCGC +
Preference number: 5 (lower is better)
Translates to: EEVSSSAWLSTAASGATQSSRSS*LTSLRR
Trigger: GCGCCGGAGGCTGGTCAGCAAGCTGGACCTGGAGGA...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp AAACCGTCACCTGGGATATCCCTTCAGGTAGCCCCTAGGCCAGTGCATTGCAGGGGCTTGCTCTTCCCATaGGTGCTGTGGGACAGCGGC +
Preference number: 5 (lower is better)
Translates to: KPSPGISLQVAPRPVHCRGLLFP*VLWDSG
Trigger: GCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGCC...CCTGCAATGCACTGGCCTAGGGGCTACCTGAAGGGATATCCCAGGTGACGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CAA 90 bp AAACCGTCACCTGGGATATCCCTTCAGGTAGCCCCTAGGCCAGTGCATTGCAGGAACGGCCTCGATCCCTaGCCACTTGCGCTTGGGGAC +
Preference number: 5 (lower is better)
Translates to: KPSPGISLQVAPRPVHCRNGLDP*PLALGD
Trigger: GTCCCCAAGCGCAAGTGGCAAGGGATCGAGGCCGTT...CCTGCAATGCACTGGCCTAGGGGCTACCTGAAGGGATATCCCAGGTGACGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CAA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGCTACCCCCTCCTCCCTaGATAGCAATGGGTAATATT +
Preference number: 5 (lower is better)
Translates to: AARARAKGSAAGHSSEQPLPPPP*IAMGNI
Trigger: AATATTACCCATTGCTATCAAGGGAGGAGGGGGTAG...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAAGACTCGCCCGTTGCTTaGCCTTGGTGTGATGAGCCC +
Preference number: 5 (lower is better)
Translates to: GADKATRCQLPASCSAQQDSPVA*PWCDEP
Trigger: GGGCTCATCACACCAAGGCAAAGCAACGGGCGAGTC...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGGTGGAAAGTCCCGTCTaGGTCACTTATCTGAGACAA +
Preference number: 5 (lower is better)
Translates to: AARARAKGSAAGHSSEQPVESPV*VTYLRQ
Trigger: TTGTCTCAGATAAGTGACCAAGACGGGACTTTCCAC...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS TCA 90 bp CTACACAATGTCCTAGACGTGCTCCAAAGACAGCTGTCCGTGCGGTaGCGACGCCTCTGTGAATCACTGTGCCCACGGACCTCGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LHNVLDVLQRQLSVR*RRLCESLCPRTSVV
Trigger: CACCACCGAGGTCCGTGGGCACAGTGATTCACAGAGGCGTCGTCACCGCACGGACAGCTGTCTTTGGAGCACGTCTAGGACATTGTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495192.1
CDS CCA 90 bp GTGCACATGCACTCCCCCATGCTGTGGCCATCTGAGTCCATCTCCTaGGAGGAGACAGGCACACACAGGCCTGAGCTCTCTAAGACACAG +
Preference number: 5 (lower is better)
Translates to: VHMHSPMLWPSESIS*EETGTHRPELSKTQ
Trigger: CTGTGTCTTAGAGAGCTCAGGCCTGTGTGTGCCTGTCTCCTCCCAGGAGATGGACTCAGATGGCCACAGCATGGGGGAGTGCATGTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS-3UTR CAA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACCTGGGCTCCAGGGCCTaGGCGGCCAGCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNLGSRA*AASSSF
Trigger: GAAGGAGCTGCTGGCCGCCAAGGCCCTGGAGCCCAG...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGGGGTGTTGGACGGGCTaGGGCGCCTGCAGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQGCWTG*GACRPA
Trigger: TGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACCC...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAACACTTCTCCTCCTCATaGGTGCGCTGGATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GADKATRCQLPASCSAQQHFSSS*VRWISR
Trigger: CCTGCTGATCCAGCGCACCAATGAGGAGGAGAAGTG...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GTTCGGCCTAGTGCAAGGGAAACCGTCACCTGGGATATCCCTTCAGGTAGCCCCATGCTCAGACTCTTTTaGCCTCCAGGGGCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: VRPSARETVTWDIPSGSPMLRLF*PPGASL
Trigger: GAGCGAGGCCCCTGGAGGCAAAAAGAGTCTGAGCAT...GGGGCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCTTGCACTAGGCCGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CAA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCGGCTCCTGCTGCCCATaGTGCTGGGGTGGAGGGGCG +
Preference number: 5 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGGSCCP*CWGGGA
Trigger: CGCCCCTCCACCCCAGCACAATGGGCAGCAGGAGCC...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp GTTCGGCCTAGTGCAAGGGAAACCGTCACCTGGGATATCCCTTCAGGTAGCCCCGGCTCCTCAACTCATTaGAAAATGTCCCGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: VRPSARETVTWDIPSGSPGSSTH*KMSRPG
Trigger: GCCCGGCCGGGACATTTTCAAATGAGTTGAGGAGCC...GGGGCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCTTGCACTAGGCCGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS TCA 90 bp TTCTGCAGGGCCTTCTGGGTGGACTGCAGCACTGACTCGTGGAACTaGTGTGCAAACTCTTCTGCCACAAAGGGCTCCCACGGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: FCRAFWVDCSTDSWN*CANSSATKGSHGLL
Trigger: GAGCAAGCCGTGGGAGCCCTTTGTGGCAGAAGAGTTTGCACATCAGTTCCACGAGTCAGTGCTGCAGTCCACCCAGAAGGCCCTGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS GCA 90 bp CTTTCAACCGAGGTGGAAACCAACATTAACCCAGTCCTGGGGCTTTaGAGGACCGCAGACACCAGGCTTCCCTGGGATCCATGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: LSTEVETNINPVLGL*RTADTRLPWDPWLP
Trigger: TGGGAGCCATGGATCCCAGGGAAGCCTGGTGTCTGCGGTCCTGCAAAGCCCCAGGACTGGGTTAATGTTGGTTTCCACCTCGGTTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS GCA 90 bp GGTTGTATTCAGCCAGACAAAGAGCCTTCATCTGTCCAGTGGACATaGCCGCAGGGCCTCATGTGTGCAGAGCACCTATCAGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GCIQPDKEPSSVQWT*PQGLMCAEHLSGQA
Trigger: GGCCTGGCCTGATAGGTGCTCTGCACACATGAGGCCCTGCGGGCATGTCCACTGGACAGATGAAGGCTCTTTGTCTGGCTGAATACAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS CCA 90 bp GCAACTTTGGTCAGCCTCAACCACAGCCGAGAGCTGAGCAGGGACTaGCAGCCTCATTACCTTTATGCTTCTGCAGGGCCTTCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: ATLVSLNHSRELSRD*QPHYLYASAGPSGW
Trigger: CCACCCAGAAGGCCCTGCAGAAGCATAAAGGTAATGAGGCTGCCAGTCCCTGCTCAGCTCTCGGCTGTGGTTGAGGCTGACCAAAGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562659.1
CDS CCA 90 bp AAAAGGCTCTCTCTCCGACCAGCGCCCAGGCAATTTCGGCCACCTTaGCCCTGGCAGATCCACAATGAGGTAATTGACGACCAAGGACGG +
Preference number: 5 (lower is better)
Translates to: KRLSLRPAPRQFRPP*PWQIHNEVIDDQGR
Trigger: CCGTCCTTGGTCGTCAATTACCTCATTGTGGATCTGCCAGGGCCAAGGTGGCCGAAATTGCCTGGGCGCTGGTCGGAGAGAGAGCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635906.1
CDS-3UTR CAA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAGGCACCAGGGCGCCATaGAGCGGCGAGGGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETGTRAP*SGEGVR
Trigger: CCTCACCCCCTCGCCGCTCAATGGCGCCCTGGTGCC...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR CAA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCACGGGCCGCTGGAGGTaGAGTGGCGGGAAGCGGGAA +
Preference number: 5 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGTGRWR*SGGKRE
Trigger: TTCCCGCTTCCCGCCACTCAACCTCCAGCGGCCCGT...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CAA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGCTGGGCTCCAGGGCCTaGGCGGCCAGCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQLGSRA*AASSSF
Trigger: GAAGGAGCTGCTGGCCGCCAAGGCCCTGGAGCCCAG...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTAGGGTGTTGGACGGGCTaGGGCGCCTGCAGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLGCWTG*GACRPA
Trigger: TGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACCC...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAGGGTGTTGGACGGGCTaGGGCGCCTGCAGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETGCWTG*GACRPA
Trigger: TGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACCC...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGACGGATGCAAGGGGTGTaGGACGGGCTTGGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRRMQGV*DGLGRL
Trigger: CAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCCG...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCTCCTCCAGGTCCAGCTaGCTGACCAGCCTCCGGCGC +
Preference number: 5 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGSSRSS*LTSLRR
Trigger: GCGCCGGAGGCTGGTCAGCAAGCTGGACCTGGAGGA...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp GGCCAGTGCATTGCAGGCAAGGCAAGGCACTTTCGTAAGTGGTCCAGTTCTGCCGCTTGCTCTGAATTGTaGGGGGCGACGGGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: GQCIAGKARHFRKWSSSAACSEL*GATGFS
Trigger: AGAGAAGCCCGTCGCCCCCAACAATTCAGAGCAAGC...GGCAGAACTGGACCACTTACGAAAGTGCCTTGCCTTGCCTGCAATGCACTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CAA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTGTCCCTCGGAGAGTTaGTCAAGGAGTCGGCCACTG +
Preference number: 5 (lower is better)
Translates to: PLVRALGSKRGLLDLNTACPSES*SRSRPL
Trigger: CAGTGGCCGACTCCTTGACAAACTCTCCGAGGGACA...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR CAA 90 bp GGCCAGTGCATTGCAGGCAAGGCAAGGCACTTTCGTAAGTGGTCCAGTTCTGCCCACATCCAGAGAGGCTaGCTGCGTGGCTGGTTCACT +
Preference number: 5 (lower is better)
Translates to: GQCIAGKARHFRKWSSSAHIQRG*LRGWFT
Trigger: AGTGAACCAGCCACGCAGCAAGCCTCTCTGGATGTG...GGCAGAACTGGACCACTTACGAAAGTGCCTTGCCTTGCCTGCAATGCACTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CAA 90 bp GTTCGGCCTAGTGCAAGGGAAACCGTCACCTGGGATATCCCTTCAGGTAGCCCCACGGACGTGTCAACCTaGTGGTTCTGCTCTGCAGAC +
Preference number: 5 (lower is better)
Translates to: VRPSARETVTWDIPSGSPTDVST*WFCSAD
Trigger: GTCTGCAGAGCAGAACCACAAGGTTGACACGTCCGT...GGGGCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCTTGCACTAGGCCGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS GCA 90 bp CTTCCCATTGGTGCTGTGGGACAGCGGCACAGGAATGTCCTTGGGTaGAGCGCCCCGGATATAGTGAAGCATGCTCAGACTCTTTTTGCC +
Preference number: 5 (lower is better)
Translates to: LPIGAVGQRHRNVLG*SAPDIVKHAQTLFA
Trigger: GGCAAAAAGAGTCTGAGCATGCTTCACTATATCCGGGGCGCTGCACCCAAGGACATTCCTGTGCCGCTGTCCCACAGCACCAATGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS GCA 90 bp GGAACTGATGTGCAAACTCTTCTGCCACAAAGGGCTCCCACGGCTTaGTCTTCCCATTGGTGCTGTGGGACAGCGGCACAGGAATGTCCT +
Preference number: 5 (lower is better)
Translates to: GTDVQTLLPQRAPTA*SSHWCCGTAAQECP
Trigger: AGGACATTCCTGTGCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGCCGTGGGAGCCCTTTGTGGCAGAAGAGTTTGCACATCAGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS CCA 90 bp GCCAGTTCCTTTCAACCGAGGTGGAAACCAACATTAACCCAGTCCTaGGGCTTTGCAGGACCGCAGACACCAGGCTTCCCTGGGATCCAT +
Preference number: 5 (lower is better)
Translates to: ASSFQPRWKPTLTQS*GFAGPQTPGFPGIH
Trigger: ATGGATCCCAGGGAAGCCTGGTGTCTGCGGTCCTGCAAAGCCCCAGGACTGGGTTAATGTTGGTTTCCACCTCGGTTGAAAGGAACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS CCA 90 bp TGCTGGCACCTGAACACCCTGAAGGCCAGTTCCTTTCAACCGAGGTaGAAACCAACATTAACCCAGTCCTGGGGCTTTGCAGGACCGCAG +
Preference number: 5 (lower is better)
Translates to: CWHLNTLKASSFQPR*KPTLTQSWGFAGPQ
Trigger: CTGCGGTCCTGCAAAGCCCCAGGACTGGGTTAATGTTGGTTTCCACCTCGGTTGAAAGGAACTGGCCTTCAGGGTGTTCAGGTGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS-3UTR CAA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTACTGGGCTCCAGGGCCTaGGCGGCCAGCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLLGSRA*AASSSF
Trigger: GAAGGAGCTGCTGGCCGCCAAGGCCCTGGAGCCCAG...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGACTGGCTCGTGACGGTTaGGTCCTGGCCTGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRLARDG*VLAWWC
Trigger: GCACCACCAGGCCAGGACCAAACCGTCACGAGCCAG...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAATCGATCCCTTGCCACTaGCGCTTGGGGACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: EEVSSSAWLSTAASGATQSIPCH*RLGTSS
Trigger: GGAGGAAGTCCCCAAGCGCAAGTGGCAAGGGATCGA...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCAGGAAGACTCGCCCGTaGCTTTGCCTTGGTGTGATG +
Preference number: 5 (lower is better)
Translates to: PLVRALGSKRGLLDLNTARKTRP*LCLGVM
Trigger: CATCACACCAAGGCAAAGCAACGGGCGAGTCTTCCT...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAACACTGGATGGAAAAGTaGGGGACAGGCTACTGCAAG +
Preference number: 5 (lower is better)
Translates to: GADKATRCQLPASCSAQQHWMEK*GTGYCK
Trigger: CTTGCAGTAGCCTGTCCCCAACTTTTCCATCCAGTG...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS TCA 90 bp GGTGACGACGCCTCTGTGAATCACTGTGCCCACGGACCTCGGTGGTaGCGTGCGAGGATGTATTCTTATTTCAAGTCAGACAAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: GDDASVNHCAHGPRW*RARMYSYFKSDKVA
Trigger: GGCCACCTTGTCTGACTTGAAATAAGAATACATCCTCGCACGTCACCACCGAGGTCCGTGGGCACAGTGATTCACAGAGGCGTCGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495192.1
CDS GCA 90 bp CGACGCCTCTGTGAATCACTGTGCCCACGGACCTCGGTGGTGACGTaGGAGGATGTATTCTTATTTCAAGTCAGACAAGGTGGCCCCAAC +
Preference number: 5 (lower is better)
Translates to: RRLCESLCPRTSVVT*EDVFLFQVRQGGPN
Trigger: GTTGGGGCCACCTTGTCTGACTTGAAATAAGAATACATCCTCGCACGTCACCACCGAGGTCCGTGGGCACAGTGATTCACAGAGGCGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495192.1
CDS GCA 90 bp ATGGTGATGTATTTTCCGTATGCAGGAGCCCGAAGGCCCGCTTTGTaGTCTCCTCTTCACACCCTGCCCAGCAGAGCCCAAAACCTCTCT +
Preference number: 5 (lower is better)
Translates to: MVMYFPYAGARRPAL*SPLHTLPSRAQNLS
Trigger: AGAGAGGTTTTGGGCTCTGCTGGGCAGGGTGTGAAGAGGAGAGCACAAAGCGGGCCTTCGGGCTCCTGCATACGGAAAATACATCACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496345.1
CDS CCA 90 bp TGCTCTTCCCATTGGTGCTGTGGGACAGCGGCACAGGAATGTCCTTaGGTGCAGCGCCCCGGATATAGTGAAGCATGCTCAGACTCTTTT +
Preference number: 5 (lower is better)
Translates to: CSSHWCCGTAAQECP*VQRPGYSEACSDSF
Trigger: AAAAGAGTCTGAGCATGCTTCACTATATCCGGGGCGCTGCACCCAAGGACATTCCTGTGCCGCTGTCCCACAGCACCAATGGGAAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS CCA 90 bp ACAGCACAGCCACGCTCCCTTTATGCTTCTGCAGGGCCTTCTGGGTaGACTGCAGCACTGACTCGTGGAACTGATGTGCAAACTCTTCTG +
Preference number: 5 (lower is better)
Translates to: TAQPRSLYASAGPSG*TAALTRGTDVQTLL
Trigger: CAGAAGAGTTTGCACATCAGTTCCACGAGTCAGTGCTGCAGTCCACCCAGAAGGCCCTGCAGAAGCATAAAGGGAGCGTGGCTGTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
CDS-3UTR CAA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCTGGGCTCCAGGGCCTaGGCGGCCAGCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLLGSRA*AASSSF
Trigger: GAAGGAGCTGCTGGCCGCCAAGGCCCTGGAGCCCAG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAAGCTGCTCCGAGGGCTaGCCCCGCTCCTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETSCSEG*PRSSVA
Trigger: TGCCACTGAGGAGCGGGGCAAGCCCTCGGAGCAGCT...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTACGGATGCAAGGGGTGTaGGACGGGCTTGGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLRMQGV*DGLGRL
Trigger: CAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCCG...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGGGAGGTGGCTGGTACTaGTCCAGAGGGGCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEGGGWY*SRGAGS
Trigger: TGAGCCTGCCCCTCTGGACAAGTACCAGCCACCTCC...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCGGAGGTGGCTGGTACTaGTCCAGAGGGGCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGGGGWY*SRGAGS
Trigger: TGAGCCTGCCCCTCTGGACAAGTACCAGCCACCTCC...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAGCCGCTTGCTCTGAATaGTTGGGGGCGACGGGCTTC +
Preference number: 5 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRAACSE*LGATGF
Trigger: GAAGCCCGTCGCCCCCAACAATTCAGAGCAAGCGGC...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCGGCACAGGAATGTCCTaGGGTGCAGCGCCCCGGATA +
Preference number: 5 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGGTGMS*GAAPRI
Trigger: TATCCGGGGCGCTGCACCCAAGGACATTCCTGTGCC...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAGGCTCCTGCTGCCCATaGTGCTGGGGTGGAGGGGCG +
Preference number: 5 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSGSCCP*CWGGGA
Trigger: CGCCCCTCCACCCCAGCACAATGGGCAGCAGGAGCC...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAAACGGCCTCGATCCCTaGCCACTTGCGCTTGGGGAC +
Preference number: 5 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRNGLDP*PLALGD
Trigger: GTCCCCAAGCGCAAGTGGCAAGGGATCGAGGCCGTT...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAACTGCCGCTCCAGATTTaGCTCTTCTATGTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: GADKATRCQLPASCSAQQLPLQI*LFYVFL
Trigger: CAGGAACACATAGAAGAGCAAAATCTGGAGCGGCAG...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GTTCGGCCTAGTGCAAGGGAAACCGTCACCTGGGATATCCCTTCAGGTAGCCCCCTGCCGCTCCAGATTTaGCTCTTCTATGTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: VRPSARETVTWDIPSGSPLPLQI*LFYVFL
Trigger: CAGGAACACATAGAAGAGCAAAATCTGGAGCGGCAG...GGGGCTACCTGAAGGGATATCCCAGGTGACGGTTTCCCTTGCACTAGGCCGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CAA 90 bp GCAGCAAGGGCTAGGGCCAAGGGCTCGGCTGCTGGTCACAGCAGTGAGCAGCCGAGTATTATGAGCTACTaGAGGAAAATACCATTCTGC +
Preference number: 5 (lower is better)
Translates to: AARARAKGSAAGHSSEQPSIMSY*RKIPFC
Trigger: GCAGAATGGTATTTTCCTCAAGTAGCTCATAATACT...CGGCTGCTCACTGCTGTGACCAGCAGCCGAGCCCTTGGCCCTAGCCCTTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS TCA 90 bp AGGACTGTCCCTCGGAGAGTTTGTCAAGGAGTCGGCCACTGCTGCTaGCAGTGCCTTCTGCTTCATGGCACGGAGCATTTCAACAAGTCT +
Preference number: 5 (lower is better)
Translates to: RTVPRRVCQGVGHCC*QCLLLHGTEHFNKS
Trigger: AGACTTGTTGAAATGCTCCGTGCCATGAAGCAGAAGGCACTGTCAGCAGCAGTGGCCGACTCCTTGACAAACTCTCCGAGGGACAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000438180.1
ENST00000495192.1
ENST00000562659.1
CDS CCA 90 bp TTCTTCTCTTTGGGGTTGCAGACGCCTGGGAAAGGCTGTTCCTTGTaGTCCTCTTCCCCACTGGTGATGTTGATGTCACTGTCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: FFSLGLQTPGKGCSL*SSSPLVMLMSLSSE
Trigger: CTCCGAGGACAGTGACATCAACATCACCAGTGGGGAAGAGGACCACAAGGAACAGCCTTTCCCAGGCGTCTGCAACCCCAAAGAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS-3UTR CAA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGGCTCCTCCGCCTGTTaGGCGAGCTTGCGCAGCGCG +
Preference number: 5 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGGSSAC*ASLRSA
Trigger: CGCGCTGCGCAAGCTCGCCAAACAGGCGGAGGAGCC...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR CAA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTACGGGCCGCTGGAGGTaGAGTGGCGGGAAGCGGGAA +
Preference number: 5 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLTGRWR*SGGKRE
Trigger: TTCCCGCTTCCCGCCACTCAACCTCCAGCGGCCCGT...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CAA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAAGCTGCTCCGAGGGCTaGCCCCGCTCCTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSSCSEG*PRSSVA
Trigger: TGCCACTGAGGAGCGGGGCAAGCCCTCGGAGCAGCT...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGAGGACGTGTCCAGTTaGAGGGGCGGCTGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIEDVSS*RGGCSA
Trigger: GGCCGAGCAGCCGCCCCTCAAACTGGACACGTCCTC...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCCAGGCTCCGCGGCCTTaGGGATGTCAGACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGQAPRP*GCQTRK
Trigger: CTTCCTTGTCTGACATCCCAAAGGCCGCGGAGCCTG...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGCAGGCTCCGCGGCCTTaGGGATGTCAGACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEQAPRP*GCQTRK
Trigger: CTTCCTTGTCTGACATCCCAAAGGCCGCGGAGCCTG...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACTCGATCCCTTGCCACTaGCGCTTGGGGACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNSIPCH*RLGTSS
Trigger: GGAGGAAGTCCCCAAGCGCAAGTGGCAAGGGATCGA...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GGCCAGTGCATTGCAGGCAAGGCAAGGCACTTTCGTAAGTGGTCCAGTTCTGCCGGAGCCTGGAATCCTTaGCTTCATGCATGGCACATT +
Preference number: 5 (lower is better)
Translates to: GQCIAGKARHFRKWSSSAGAWNP*LHAWHI
Trigger: AATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCC...GGCAGAACTGGACCACTTACGAAAGTGCCTTGCCTTGCCTGCAATGCACTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CAA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAACACATCCAGAGAGGCTaGCTGCGTGGCTGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: EEVSSSAWLSTAASGATQHIQRG*LRGWFF
Trigger: AAAGAACCAGCCACGCAGCAAGCCTCTCTGGATGTG...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412692.5
CDS TCA 90 bp CTGGTGATTGGAGTTTATAAAAACTTGTGCCCACGGCTGAACGGCTaGGCAGCTGTGGCGCTCAGCAACTTTGGTCAGCCTCAACCACAG +
Preference number: 5 (lower is better)
Translates to: LVIGVYKNLCPRLNG*AAVALSNFGQPQPQ
Trigger: CTGTGGTTGAGGCTGACCAAAGTTGCTGAGCGCCACAGCTGCTCAGCCGTTCAGCCGTGGGCACAAGTTTTTATAAACTCCAATCACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562659.1
CDS GCA 90 bp ATCCTCCGCCGCTTCCTCCGCTTCTGGGCCACCAATTCCTCCTTCTaGTGTTGGGTGGTCAAGCCAAAAAGTTGCAAAAACTCTAGCTTC +
Preference number: 5 (lower is better)
Translates to: ILRRFLRFWATNSSF*CWVVKPKSCKNSSF
Trigger: GAAGCTAGAGTTTTTGCAACTTTTTGGCTTGACCACCCAACAGCAGAAGGAGGAATTGGTGGCCCAGAAGCGGAGGAAGCGGCGGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000469381.1
CDS CCA 90 bp CGCCGCTTCCTCCGCTTCTGGGCCACCAATTCCTCCTTCTGCTGTTaGGTGGTCAAGCCAAAAAGTTGCAAAAACTCTAGCTTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: RRFLRFWATNSSFCC*VVKPKSCKNSSFSE
Trigger: CTCTGAGAAGCTAGAGTTTTTGCAACTTTTTGGCTTGACCACCCAACAGCAGAAGGAGGAATTGGTGGCCCAGAAGCGGAGGAAGCGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 90 bp AGAAATGGTTGTATTCAGCCAGACAAAGAGCCTTCATCTGTCCAGTaGACATGCCCGCAGGGCCTCATGTGTGCAGAGCACCTATCAGGC +
Preference number: 5 (lower is better)
Translates to: RNGCIQPDKEPSSVQ*TCPQGLMCAEHLSG
Trigger: GCCTGATAGGTGCTCTGCACACATGAGGCCCTGCGGGCATGTCCACTGGACAGATGAAGGCTCTTTGTCTGGCTGAATACAACCATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS-3UTR CAA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGCACTTCTCCTCCTCATaGGTGCGCTGGATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEHFSSS*VRWISR
Trigger: CCTGCTGATCCAGCGCACCAATGAGGAGGAGAAGTG...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCACTGGCTCGTGACGGTTaGGTCCTGGCCTGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSLARDG*VLAWWC
Trigger: GCACCACCAGGCCAGGACCAAACCGTCACGAGCCAG...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGGAGGTGGCTGGTACTaGTCCAGAGGGGCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLGGGWY*SRGAGS
Trigger: TGAGCCTGCCCCTCTGGACAAGTACCAGCCACCTCC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAGCTTGCTCTGAATTGTaGGGGGCGACGGGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRACSEL*GATGFS
Trigger: AGAGAAGCCCGTCGCCCCCAACAATTCAGAGCAAGC...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGGCTTGCTCTGAATTGTaGGGGGCGACGGGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEACSEL*GATGFS
Trigger: AGAGAAGCCCGTCGCCCCCAACAATTCAGAGCAAGC...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGCCGCTTGCTCTGAATaGTTGGGGGCGACGGGCTTC +
Preference number: 5 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLAACSE*LGATGF
Trigger: GAAGCCCGTCGCCCCCAACAATTCAGAGCAAGCGGC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp CAAGGCACTTTCGTAAGTGGTCCAGTTCTGCCTGGAGCCGCTCCCTTTCTGAGATCGAAGTTGGGACTGTaGTTCATCTCATCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: QGTFVSGPVLPGAAPFLRSKLGL*FISSGL
Trigger: CAGCCCTGATGAGATGAACAACAGTCCCAACTTCGA...TCTCAGAAAGGGAGCGGCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CAA 90 bp CAAGGCACTTTCGTAAGTGGTCCAGTTCTGCCTGGAGCCGCTCCCTTTCTGAGACTGATGTGGGTCAGGTaGAAGATGGTCAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: QGTFVSGPVLPGAAPFLRLMWVR*KMVRNF
Trigger: GAAGTTCCTGACCATCTTCAACCTGACCCACATCAG...TCTCAGAAAGGGAGCGGCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CAA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCGTGGAAAGTCCCGTCTaGGTCACTTATCTGAGACAA +
Preference number: 5 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAVESPV*VTYLRQ
Trigger: TTGTCTCAGATAAGTGACCAAGACGGGACTTTCCAC...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCAGGTGTGGGCTCCTTTaGATGCTCTCTGAATACTCT +
Preference number: 5 (lower is better)
Translates to: PLVRALGSKRGLLDLNTARCGLL*MLSEYS
Trigger: AGAGTATTCAGAGAGCATCAAAAGGAGCCCACACCT...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS GCA 90 bp CTGTGTTCTGTCCCTGGCTCTTCCAGAGTCTTAAGAATCGGCATCTaGTGCTGTCTTGGCTCAAACTCGGAGTTCTTGGAACCCCCAGAT +
Preference number: 5 (lower is better)
Translates to: LCSVPGSSRVLRIGI*CCLGSNSEFLEPPD
Trigger: ATCTGGGGGTTCCAAGAACTCCGAGTTTGAGCCAAGACAGCAGCAGATGCCGATTCTTAAGACTCTGGAAGAGCCAGGGACAGAACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471070.1
CDS GCA 90 bp CAGGCCCAGTTGAAAGGAAGCAACCATCTCAAAGCGAGCCCAGATTaGTCTCGGCATCCACTACACAATGTCCTAGACGTGCTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: QAQLKGSNHLKASPD*SRHPLHNVLDVLQR
Trigger: TCTTTGGAGCACGTCTAGGACATTGTGTAGTGGATGCCGAGAGCAATCTGGGCTCGCTTTGAGATGGTTGCTTCCTTTCAACTGGGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495192.1
CDS CCA 90 bp GCTTCCTCCGCTTCTGGGCCACCAATTCCTCCTTCTGCTGTTGGGTaGTCAAGCCAAAAAGTTGCAAAAACTCTAGCTTCTCAGAGGACG +
Preference number: 5 (lower is better)
Translates to: ASSASGPPIPPSAVG*SSQKVAKTLASQRT
Trigger: CGTCCTCTGAGAAGCTAGAGTTTTTGCAACTTTTTGGCTTGACCACCCAACAGCAGAAGGAGGAATTGGTGGCCCAGAAGCGGAGGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTACCTAGCGAAGGGGACTaGGGCTCATGGCTCATGCCT +
Preference number: 5 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLPSEGD*GSWLMP
Trigger: AGGCATGAGCCATGAGCCCAAGTCCCCTTCGCTAGG...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR CAA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGAGGGGGTGAGGGGGTaGACGGTGGCGGTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVEGVRG*TVAVVL
Trigger: CAGGACCACCGCCACCGTCAACCCCCTCACCCCCTC...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS-3UTR CAA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCCGGATGCAAGGGGTGTaGGACGGGCTTGGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICRMQGV*DGLGRL
Trigger: CAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCCG...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTGGCTCGTGACGGTTaGGTCCTGGCCTGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVLARDG*VLAWWC
Trigger: GCACCACCAGGCCAGGACCAAACCGTCACGAGCCAG...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAGGAGGTGGCTGGTACTaGTCCAGAGGGGCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSGGGWY*SRGAGS
Trigger: TGAGCCTGCCCCTCTGGACAAGTACCAGCCACCTCC...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCTCCTCCAGGTCCAGCTaGCTGACCAGCCTCCGGCGC +
Preference number: 5 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICSSRSS*LTSLRR
Trigger: GCGCCGGAGGCTGGTCAGCAAGCTGGACCTGGAGGA...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGGAGGACGTGTCCAGTTaGAGGGGCGGCTGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWEDVSS*RGGCSA
Trigger: GGCCGAGCAGCCGCCCCTCAAACTGGACACGTCCTC...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGTGTCCCTCGGAGAGTTaGTCAAGGAGTCGGCCACTG +
Preference number: 5 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQCPSES*SRSRPL
Trigger: CAGTGGCCGACTCCTTGACAAACTCTCCGAGGGACA...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR CAA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCCAGGCTCCGCGGCCTTaGGGATGTCAGACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLQAPRP*GCQTRK
Trigger: CTTCCTTGTCTGACATCCCAAAGGCCGCGGAGCCTG...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTGGCACAGGAATGTCCTaGGGTGCAGCGCCCCGGATA +
Preference number: 5 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLGTGMS*GAAPRI
Trigger: TATCCGGGGCGCTGCACCCAAGGACATTCCTGTGCC...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAGGCTTGCTCTTCCCATaGGTGCTGTGGGACAGCGGC +
Preference number: 5 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSGLLFP*VLWDSG
Trigger: GCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGCC...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAGGCTTGCTCTTCCCATaGGTGCTGTGGGACAGCGGC +
Preference number: 5 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSGLLFP*VLWDSG
Trigger: GCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGCC...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATGGCTCCTGCTGCCCATaGTGCTGGGGTGGAGGGGCG +
Preference number: 5 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNGSCCP*CWGGGA
Trigger: CGCCCCTCCACCCCAGCACAATGGGCAGCAGGAGCC...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAACCAGATAATTTACTATaGGAAGGTATCCCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: GADKATRCQLPASCSAQQPDNLL*EGIPLQ
Trigger: CTGCAGAGGGATACCTTCCAATAGTAAATTATCTGG...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GGGGCAGATAAAGCGACACGATGCCAGCTGCCAGCAAGCTGTTCTGCGCAGCAATGGCATTTTCTACACTaGTGTGAAACATGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: GADKATRCQLPASCSAQQWHFLH*CETCGS
Trigger: TGAGCCACATGTTTCACACAAGTGTAGAAAATGCCA...TTGCTGCGCAGAACAGCTTGCTGGCAGCTGGCATCGTGTCGCTTTATCTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS GCA 90 bp GGAGAGTTTGTCAAGGAGTCGGCCACTGCTGCTGACAGTGCCTTCTaGTTCATGGCACGGAGCATTTCAACAAGTCTCTCTTTGTCTTTC +
Preference number: 5 (lower is better)
Translates to: GEFVKESATAADSAF*FMARSISTSLSLSF
Trigger: GAAAGACAAAGAGAGACTTGTTGAAATGCTCCGTGCCATGAAGCAGAAGGCACTGTCAGCAGCAGTGGCCGACTCCTTGACAAACTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000438180.1
CDS GCA 90 bp GGAGAGTTTGTCAAGGAGTCGGCCACTGCTGCTGACAGTGCCTTCTaGTTCATGGCACGGAGCATTTCAACAAGTCTCTCTTTGTCTATG +
Preference number: 5 (lower is better)
Translates to: GEFVKESATAADSAF*FMARSISTSLSLSM
Trigger: CATAGACAAAGAGAGACTTGTTGAAATGCTCCGTGCCATGAAGCAGAAGGCACTGTCAGCAGCAGTGGCCGACTCCTTGACAAACTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495192.1
CDS-3UTR CAA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGACGGGCCGCTGGAGGTaGAGTGGCGGGAAGCGGGAA +
Preference number: 5 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVTGRWR*SGGKRE
Trigger: TTCCCGCTTCCCGCCACTCAACCTCCAGCGGCCCGT...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CAA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATAGCTGCTCCGAGGGCTaGCCCCGCTCCTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNSCSEG*PRSSVA
Trigger: TGCCACTGAGGAGCGGGGCAAGCCCTCGGAGCAGCT...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGAGAAGATGCCATGGTaGGAGATGAGGCTGGGCACC +
Preference number: 5 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLEKMPW*EMRLGT
Trigger: GGTGCCCAGCCTCATCTCCAACCATGGCATCTTCTC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCCTGGCTCGTGACGGTTaGGTCCTGGCCTGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFLARDG*VLAWWC
Trigger: GCACCACCAGGCCAGGACCAAACCGTCACGAGCCAG...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTCGCGTCTCCAAGGTGTaGTCCATCAGGGACACGGGG +
Preference number: 5 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGRVSKV*SIRDTG
Trigger: CCCCGTGTCCCTGATGGACAACACCTTGGAGACGCG...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGAGGACGTGTCCAGTTaGAGGGGCGGCTGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVEDVSS*RGGCSA
Trigger: GGCCGAGCAGCCGCCCCTCAAACTGGACACGTCCTC...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGCCGCTTGCTCTGAATaGTTGGGGGCGACGGGCTTC +
Preference number: 5 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGAACSE*LGATGF
Trigger: GAAGCCCGTCGCCCCCAACAATTCAGAGCAAGCGGC...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAGGCTCCGCGGCCTTaGGGATGTCAGACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLQAPRP*GCQTRK
Trigger: CTTCCTTGTCTGACATCCCAAAGGCCGCGGAGCCTG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTCAGGCTCCGCGGCCTTaGGGATGTCAGACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIQAPRP*GCQTRK
Trigger: CTTCCTTGTCTGACATCCCAAAGGCCGCGGAGCCTG...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGGCACAGGAATGTCCTaGGGTGCAGCGCCCCGGATA +
Preference number: 5 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGGTGMS*GAAPRI
Trigger: TATCCGGGGCGCTGCACCCAAGGACATTCCTGTGCC...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCATCGATCCCTTGCCACTaGCGCTTGGGGACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSSIPCH*RLGTSS
Trigger: GGAGGAAGTCCCCAAGCGCAAGTGGCAAGGGATCGA...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp CCTGGGATATCCCTTCAGGTAGCCCCTAGGCCAGTGCATTGCAGGCAAGGCAAGGATCAAGTTTTAGTGTaGCTAATGGAGCCTTCATGT +
Preference number: 5 (lower is better)
Translates to: PGISLQVAPRPVHCRQGKDQVLV*LMEPSC
Trigger: ACATGAAGGCTCCATTAGCAACACTAAAACTTGATC...CTTGCCTTGCCTGCAATGCACTGGCCTAGGGGCTACCTGAAGGGATATCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CAA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGACTGACCATCTCCATCTaGTGGTGGATCCCTGGCATT +
Preference number: 5 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRLTISI*WWIPGI
Trigger: AATGCCAGGGATCCACCACAAGATGGAGATGGTCAG...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCCTGACCATCTCCATCTaGTGGTGGATCCCTGGCATT +
Preference number: 5 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGLTISI*WWIPGI
Trigger: AATGCCAGGGATCCACCACAAGATGGAGATGGTCAG...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS CCA 90 bp TTGTCAAGGAGTCGGCCACTGCTGCTGACAGTGCCTTCTGCTTCATaGCACGGAGCATTTCAACAAGTCTCTCTTTGTCTTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LSRSRPLLLTVPSAS*HGAFQQVSLCLSSS
Trigger: AGAAGAGGAAAGACAAAGAGAGACTTGTTGAAATGCTCCGTGCCATGAAGCAGAAGGCACTGTCAGCAGCAGTGGCCGACTCCTTGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000438180.1
CDS CCA 90 bp GCTTCCTCCGCTTCTGGGCCACCAATTCCTCCTTCTGCTGTTGGGTaGTCAAGCCAAAAAGTTGCAAAAACTCTAGCTTCTAGATTGGGA +
Preference number: 5 (lower is better)
Translates to: ASSASGPPIPPSAVG*SSQKVAKTLASRLG
Trigger: TCCCAATCTAGAAGCTAGAGTTTTTGCAACTTTTTGGCTTGACCACCCAACAGCAGAAGGAGGAATTGGTGGCCCAGAAGCGGAGGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS-3UTR CAA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAGAGAAGATGCCATGGTaGGAGATGAGGCTGGGCACC +
Preference number: 5 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSEKMPW*EMRLGT
Trigger: GGTGCCCAGCCTCATCTCCAACCATGGCATCTTCTC...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCACTTCTCCTCCTCATaGGTGCGCTGGATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLHFSSS*VRWISR
Trigger: CCTGCTGATCCAGCGCACCAATGAGGAGGAGAAGTG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAACGCGTCTCCAAGGTGTaGTCCATCAGGGACACGGGG +
Preference number: 5 (lower is better)
Translates to: SLESFASCMAHSHFVSFKRVSKV*SIRDTG
Trigger: CCCCGTGTCCCTGATGGACAACACCTTGGAGACGCG...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGCGCGTCTCCAAGGTGTaGTCCATCAGGGACACGGGG +
Preference number: 5 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWRVSKV*SIRDTG
Trigger: CCCCGTGTCCCTGATGGACAACACCTTGGAGACGCG...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGCTGATGTGGGTCAGGTaGAAGATGGTCAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNELMWVR*KMVRNF
Trigger: GAAGTTCCTGACCATCTTCAACCTGACCCACATCAG...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTCACATCCAGAGAGGCTaGCTGCGTGGCTGGTTCACT +
Preference number: 5 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIHIQRG*LRGWFT
Trigger: AGTGAACCAGCCACGCAGCAAGCCTCTCTGGATGTG...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000438180.1
CDS-3UTR CAA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTATGCTCAGACTCTTTTaGCCTCCAGGGGCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLMLRLF*PPGASL
Trigger: GAGCGAGGCCCCTGGAGGCAAAAAGAGTCTGAGCAT...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGGGCTTGCTCTTCCCATaGGTGCTGTGGGACAGCGGC +
Preference number: 5 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWGLLFP*VLWDSG
Trigger: GCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGCC...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACAACGGACGTGTCAACCTaGTGGTTCTGCTCTGCAGAC +
Preference number: 5 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETTDVST*WFCSAD
Trigger: GTCTGCAGAGCAGAACCACAAGGTTGACACGTCCGT...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCACCTTGCCACTTGCGCTaGGGGACTTCCTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSPCHLR*GTSSSS
Trigger: AGATGAGGAGGAAGTCCCCAAGCGCAAGTGGCAAGG...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGAACGGCCTCGATCCCTaGCCACTTGCGCTTGGGGAC +
Preference number: 5 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWNGLDP*PLALGD
Trigger: GTCCCCAAGCGCAAGTGGCAAGGGATCGAGGCCGTT...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCAACGGCCTCGATCCCTaGCCACTTGCGCTTGGGGAC +
Preference number: 5 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICNGLDP*PLALGD
Trigger: GTCCCCAAGCGCAAGTGGCAAGGGATCGAGGCCGTT...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCAGCCTTTGGGTTGCTTaGTGTGCTCCTAGGACTTGT +
Preference number: 5 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGSLWVA*CAPRTC
Trigger: ACAAGTCCTAGGAGCACACAAAGCAACCCAAAGGCT...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGGGAAAAGCCTTTGGGTaGCTTTGTGTGCTCCTAGGA +
Preference number: 5 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEGKAFG*LCVLLG
Trigger: TCCTAGGAGCACACAAAGCAACCCAAAGGCTTTTCC...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACGGAAAAGCCTTTGGGTaGCTTTGTGTGCTCCTAGGA +
Preference number: 5 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNGKAFG*LCVLLG
Trigger: TCCTAGGAGCACACAAAGCAACCCAAAGGCTTTTCC...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGACTCGCCCGTTGCTTaGCCTTGGTGTGATGAGCCC +
Preference number: 5 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGDSPVA*PWCDEP
Trigger: GGGCTCATCACACCAAGGCAAAGCAACGGGCGAGTC...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CCTCTGGTGAGGGCCCTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCATAACTGGAAGATTCTaGGCAGACGTACAAAGCAAA +
Preference number: 5 (lower is better)
Translates to: PLVRALGSKRGLLDLNTAITGRF*ADVQSK
Trigger: TTTGCTTTGTACGTCTGCCAAGAATCTTCCAGTTAT...GGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAGGGCCCTCACCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGACTGGGTACTGTGTCTaGGGTGGTGTGCTTTCGTTT +
Preference number: 5 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNETGYCV*GGVLSF
Trigger: AAACGAAAGCACACCACCCAAGACACAGTACCCAGT...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS CCA 90 bp CGTCGTAAGAGTCATCGAGGTCGTAGTAGTACCCTGATGGAGAAATaGTTGTATTCAGCCAGACAAAGAGCCTTCATCTGTCCAGTGGAC +
Preference number: 5 (lower is better)
Translates to: RRKSHRGRSSTLMEK*LYSARQRAFICPVD
Trigger: GTCCACTGGACAGATGAAGGCTCTTTGTCTGGCTGAATACAACCATTTCTCCATCAGGGTACTACTACGACCTCGATGACTCTTACGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS-3UTR CAA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCATTCACGGTTTTGGTaGGAGCGATGGTCACCACGG +
Preference number: 5 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLHSRFW*ERWSPR
Trigger: CCGTGGTGACCATCGCTCCAACCAAAACCGTGAATG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CAA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGGAGAAGATGCCATGGTaGGAGATGAGGCTGGGCACC +
Preference number: 5 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVEKMPW*EMRLGT
Trigger: GGTGCCCAGCCTCATCTCCAACCATGGCATCTTCTC...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGTTCCTCCTTCTGCTGTaGGGTGGTCAAGCCAAAAAG +
Preference number: 5 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQFLLLL*GGQAKK
Trigger: CTTTTTGGCTTGACCACCCAACAGCAGAAGGAGGAA...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGCCGCTTGCTCTGAATaGTTGGGGGCGACGGGCTTC +
Preference number: 5 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWAACSE*LGATGF
Trigger: GAAGCCCGTCGCCCCCAACAATTCAGAGCAAGCGGC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp CAAGGCACTTTCGTAAGTGGTCCAGTTCTGCCTGGAGCCGCTCCCTTTCTGAGATTCTTTTCTTCGAAGTaGGGACTGTTGTTCATCTCA +
Preference number: 5 (lower is better)
Translates to: QGTFVSGPVLPGAAPFLRFFSSK*GLLFIS
Trigger: TGAGATGAACAACAGTCCCAACTTCGAAGAAAAGAA...TCTCAGAAAGGGAGCGGCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS-3UTR CAA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTATGCTCAGACTCTTTTaGCCTCCAGGGGCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGMLRLF*PPGASL
Trigger: GAGCGAGGCCCCTGGAGGCAAAAAGAGTCTGAGCAT...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGGCACAGGAATGTCCTaGGGTGCAGCGCCCCGGATA +
Preference number: 5 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWGTGMS*GAAPRI
Trigger: TATCCGGGGCGCTGCACCCAAGGACATTCCTGTGCC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAACGGACGTGTCAACCTaGTGGTTCTGCTCTGCAGAC +
Preference number: 5 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSTDVST*WFCSAD
Trigger: GTCTGCAGAGCAGAACCACAAGGTTGACACGTCCGT...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGTCGATCCCTTGCCACTaGCGCTTGGGGACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWSIPCH*RLGTSS
Trigger: GGAGGAAGTCCCCAAGCGCAAGTGGCAAGGGATCGA...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp GCTGACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAGGAGCCTGGAATCCTTaGCTTCATGCATGGCACATT +
Preference number: 5 (lower is better)
Translates to: ADHLHLVVDPWHFLHLCEGAWNP*LHAWHI
Trigger: AATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCC...TTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTATCCAGGGAAAAGCCTTaGGGTTGCTTTGTGTGCTCC +
Preference number: 5 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLSREKP*GCFVCS
Trigger: GGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGA...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp CTTGGGAGCAAGAGAGGCCTTCTTGATCTAAACACTGCCTCCATAGGCAGTAACATATTTGCTATTAGCTaGTCCAGATGCTGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: LGSKRGLLDLNTASIGSNIFAIS*SRCWGQ
Trigger: CTGCCCCCAGCATCTGGACAAGCTAATAGCAAATAT...GTTACTGCCTATGGAGGCAGTGTTTAGATCAAGAAGGCCTCTCTTGCTCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCATATTTGCTATTAGCTaGTCCAGATGCTGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGIFAIS*SRCWGQ
Trigger: CTGCCCCCAGCATCTGGACAAGCTAATAGCAAATAT...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGAGAGGAAGGTGCTTGTaGACTGCTGATAATACTGGC +
Preference number: 5 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNERGRCL*TADNTG
Trigger: GCCAGTATTATCAGCAGTCAACAAGCACCTTCCTCT...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGAGGTGTGGGCTCCTTTaGATGCTCTCTGAATACTCT +
Preference number: 5 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNERCGLL*MLSEYS
Trigger: AGAGTATTCAGAGAGCATCAAAAGGAGCCCACACCT...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GAGGAGGTAAGCAGTAGCGCATGGCTTTCTACGGCAGCTTCTGGTGCAACTCAATGGCATTTTCTACACTaGTGTGAAACATGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: EEVSSSAWLSTAASGATQWHFLH*CETCGS
Trigger: TGAGCCACATGTTTCACACAAGTGTAGAAAATGCCA...TTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGCTACTGCTTACCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACACACTGGATGGAAAAGTaGGGGACAGGCTACTGCAAG +
Preference number: 5 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETHWMEK*GTGYCK
Trigger: CTTGCAGTAGCCTGTCCCCAACTTTTCCATCCAGTG...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS TCA 90 bp CTCATCGCTCTCGTCGTAAGAGTCATCGAGGTCGTAGTAGTACCCTaGTGGAGAAATGGTTGTATTCAGCCAGACAAAGAGCCTTCATCT +
Preference number: 5 (lower is better)
Translates to: LIALVVRVIEVVVVP*WRNGCIQPDKEPSS
Trigger: AGATGAAGGCTCTTTGTCTGGCTGAATACAACCATTTCTCCATCAGGGTACTACTACGACCTCGATGACTCTTACGACGAGAGCGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS-3UTR CAA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAACACCATTCACGGTTTaGGTTGGAGCGATGGTCACC +
Preference number: 5 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSTPFTV*VGAMVT
Trigger: GGTGACCATCGCTCCAACCAAAACCGTGAATGGTGT...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CAA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAAGAGAAGATGCCATGGTaGGAGATGAGGCTGGGCACC +
Preference number: 5 (lower is better)
Translates to: SLESFASCMAHSHFVSFKEKMPW*EMRLGT
Trigger: GGTGCCCAGCCTCATCTCCAACCATGGCATCTTCTC...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCCACTTCTCCTCCTCATaGGTGCGCTGGATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFHFSSS*VRWISR
Trigger: CCTGCTGATCCAGCGCACCAATGAGGAGGAGAAGTG...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCGCTTGCTCTGAATTGTaGGGGGCGACGGGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICACSEL*GATGFS
Trigger: AGAGAAGCCCGTCGCCCCCAACAATTCAGAGCAAGC...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTATCGAAGTTGGGACTGTaGTTCATCTCATCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLSKLGL*FISSGL
Trigger: CAGCCCTGATGAGATGAACAACAGTCCCAACTTCGA...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp GACCATCTCCATCTTGTGGTGGATCCCTGGCATTTTCTACACTTGTGTGAAACACTGATGTGGGTCAGGTaGAAGATGGTCAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: DHLHLVVDPWHFLHLCETLMWVR*KMVRNF
Trigger: GAAGTTCCTGACCATCTTCAACCTGACCCACATCAG...TGTTTCACACAAGTGTAGAAAATGCCAGGGATCCACCACAAGATGGAGATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCTGTCCCTCGGAGAGTTaGTCAAGGAGTCGGCCACTG +
Preference number: 5 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICCPSES*SRSRPL
Trigger: CAGTGGCCGACTCCTTGACAAACTCTCCGAGGGACA...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CAA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAATGTCCCTCGGAGAGTTaGTCAAGGAGTCGGCCACTG +
Preference number: 5 (lower is better)
Translates to: SLESFASCMAHSHFVSFKCPSES*SRSRPL
Trigger: CAGTGGCCGACTCCTTGACAAACTCTCCGAGGGACA...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000438180.1
CDS-3UTR CAA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGCACATCCAGAGAGGCTaGCTGCGTGGCTGGTTCACT +
Preference number: 5 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWHIQRG*LRGWFT
Trigger: AGTGAACCAGCCACGCAGCAAGCCTCTCTGGATGTG...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CAA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGCCTTGCCACTTGCGCTaGGGGACTTCCTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWPCHLR*GTSSSS
Trigger: AGATGAGGAGGAAGTCCCCAAGCGCAAGTGGCAAGG...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTTCGATCCCTTGCCACTaGCGCTTGGGGACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCSIPCH*RLGTSS
Trigger: GGAGGAAGTCCCCAAGCGCAAGTGGCAAGGGATCGA...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGACTCGCCCGTTGCTTaGCCTTGGTGTGATGAGCCC +
Preference number: 5 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWDSPVA*PWCDEP
Trigger: GGGCTCATCACACCAAGGCAAAGCAACGGGCGAGTC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCACTGACCATCTCCATCTaGTGGTGGATCCCTGGCATT +
Preference number: 5 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSLTISI*WWIPGI
Trigger: AATGCCAGGGATCCACCACAAGATGGAGATGGTCAG...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCCATTCACGGTTTTGGTaGGAGCGATGGTCACCACGG +
Preference number: 5 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFHSRFW*ERWSPR
Trigger: CCGTGGTGACCATCGCTCCAACCAAAACCGTGAATG...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CAA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGACACCATTCACGGTTTaGGTTGGAGCGATGGTCACC +
Preference number: 5 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVTPFTV*VGAMVT
Trigger: GGTGACCATCGCTCCAACCAAAACCGTGAATGGTGT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CAA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCATTCCTCCTTCTGCTGTaGGGTGGTCAAGCCAAAAAG +
Preference number: 5 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSFLLLL*GGQAKK
Trigger: CTTTTTGGCTTGACCACCCAACAGCAGAAGGAGGAA...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGCTTGCTCTGAATTGTaGGGGGCGACGGGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVACSEL*GATGFS
Trigger: AGAGAAGCCCGTCGCCCCCAACAATTCAGAGCAAGC...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCATCGAAGTTGGGACTGTaGTTCATCTCATCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSSKLGL*FISSGL
Trigger: CAGCCCTGATGAGATGAACAACAGTCCCAACTTCGA...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCTGATGTGGGTCAGGTaGAAGATGGTCAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLLMWVR*KMVRNF
Trigger: GAAGTTCCTGACCATCTTCAACCTGACCCACATCAG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCACTGATGTGGGTCAGGTaGAAGATGGTCAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSLMWVR*KMVRNF
Trigger: GAAGTTCCTGACCATCTTCAACCTGACCCACATCAG...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGCACATCCAGAGAGGCTaGCTGCGTGGCTGGTTCACT +
Preference number: 5 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVHIQRG*LRGWFT
Trigger: AGTGAACCAGCCACGCAGCAAGCCTCTCTGGATGTG...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CAA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGATGCTCAGACTCTTTTaGCCTCCAGGGGCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVMLRLF*PPGASL
Trigger: GAGCGAGGCCCCTGGAGGCAAAAAGAGTCTGAGCAT...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACGGACGTGTCAACCTaGTGGTTCTGCTCTGCAGAC +
Preference number: 5 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFTDVST*WFCSAD
Trigger: GTCTGCAGAGCAGAACCACAAGGTTGACACGTCCGT...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAAACGGACGTGTCAACCTaGTGGTTCTGCTCTGCAGAC +
Preference number: 5 (lower is better)
Translates to: SLESFASCMAHSHFVSFKTDVST*WFCSAD
Trigger: GTCTGCAGAGCAGAACCACAAGGTTGACACGTCCGT...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGCCTTGCCACTTGCGCTaGGGGACTTCCTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWPCHLR*GTSSSS
Trigger: AGATGAGGAGGAAGTCCCCAAGCGCAAGTGGCAAGG...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCACTGCCGCTCCAGATTTaGCTCTTCTATGTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSLPLQI*LFYVFL
Trigger: CAGGAACACATAGAAGAGCAAAATCTGGAGCGGCAG...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGGAGCCTGGAATCCTTaGCTTCATGCATGGCACATT +
Preference number: 5 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIGAWNP*LHAWHI
Trigger: AATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCC...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTGGAAAAGCCTTTGGGTaGCTTTGTGTGCTCCTAGGA +
Preference number: 5 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLGKAFG*LCVLLG
Trigger: TCCTAGGAGCACACAAAGCAACCCAAAGGCTTTTCC...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCGTGGAAAGTCCCGTCTaGGTCACTTATCTGAGACAA +
Preference number: 5 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLVESPV*VTYLRQ
Trigger: TTGTCTCAGATAAGTGACCAAGACGGGACTTTCCAC...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTCACTGGATGGAAAAGTaGGGGACAGGCTACTGCAAG +
Preference number: 5 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGHWMEK*GTGYCK
Trigger: CTTGCAGTAGCCTGTCCCCAACTTTTCCATCCAGTG...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGCATTCACGGTTTTGGTaGGAGCGATGGTCACCACGG +
Preference number: 5 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWHSRFW*ERWSPR
Trigger: CCGTGGTGACCATCGCTCCAACCAAAACCGTGAATG...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
CDS-3UTR CAA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGTTCCTCCTTCTGCTGTaGGGTGGTCAAGCCAAAAAG +
Preference number: 5 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVFLLLL*GGQAKK
Trigger: CTTTTTGGCTTGACCACCCAACAGCAGAAGGAGGAA...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTCTGCCGCTCCAGATTTaGCTCTTCTATGTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGLPLQI*LFYVFL
Trigger: CAGGAACACATAGAAGAGCAAAATCTGGAGCGGCAG...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGGAGCCTGGAATCCTTaGCTTCATGCATGGCACATT +
Preference number: 5 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGGAWNP*LHAWHI
Trigger: AATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCC...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCGATCAAGTTTTAGTGTaGCTAATGGAGCCTTCATGT +
Preference number: 5 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGDQVLV*LMEPSC
Trigger: ACATGAAGGCTCCATTAGCAACACTAAAACTTGATC...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCTCCAGGGAAAAGCCTTaGGGTTGCTTTGTGTGCTCC +
Preference number: 5 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFSREKP*GCFVCS
Trigger: GGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGA...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTATATTTGCTATTAGCTaGTCCAGATGCTGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIIFAIS*SRCWGQ
Trigger: CTGCCCCCAGCATCTGGACAAGCTAATAGCAAATAT...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCTACCCCCTCCTCCCTaGATAGCAATGGGTAATATT +
Preference number: 5 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLLPPPP*IAMGNI
Trigger: AATATTACCCATTGCTATCAAGGGAGGAGGGGGTAG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAGGCTTTTACAAAGCTTaGCGTTTAAACAAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRGFYKA*RLNKAS
Trigger: AGAGGCTTTGTTTAAACGCAAAGCTTTGTAAAAGCC...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTAGGAAGACTCGCCCGTaGCTTTGCCTTGGTGTGATG +
Preference number: 5 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCRKTRP*LCLGVM
Trigger: CATCACACCAAGGCAAAGCAACGGGCGAGTCTTCCT...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTAGAGGAAGGTGCTTGTaGACTGCTGATAATACTGGC +
Preference number: 5 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIRGRCL*TADNTG
Trigger: GCCAGTATTATCAGCAGTCAACAAGCACCTTCCTCT...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAGGTGTGCTTTCGTTTTaGAGACAGTTCTTACCTTTT +
Preference number: 5 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRGVLSF*RQFLPF
Trigger: AAAAGGTAAGAACTGTCTCAAAAACGAAAGCACACC...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATACACCATTCACGGTTTaGGTTGGAGCGATGGTCACC +
Preference number: 5 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNTPFTV*VGAMVT
Trigger: GGTGACCATCGCTCCAACCAAAACCGTGAATGGTGT...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000393243.5
CDS-3UTR CAA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCTCGAAGTTGGGACTGTaGTTCATCTCATCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICSKLGL*FISSGL
Trigger: CAGCCCTGATGAGATGAACAACAGTCCCAACTTCGA...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAAAGAACAGAACCGGTTaGATCCACTCATATGCACAG +
Preference number: 5 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSKNRTG*IHSYAQ
Trigger: CTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTT...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAAAAAGCAAACTGGGCTaGAGGCATAGTAACATGGCA +
Preference number: 5 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSKSKLG*RHSNMA
Trigger: TGCCATGTTACTATGCCTCAAGCCCAGTTTGCTTTT...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCAGCCTTTGGGTTGCTTaGTGTGCTCCTAGGACTTGT +
Preference number: 5 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICSLWVA*CAPRTC
Trigger: ACAAGTCCTAGGAGCACACAAAGCAACCCAAAGGCT...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCGGAAAAGCCTTTGGGTaGCTTTGTGTGCTCCTAGGA +
Preference number: 5 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFGKAFG*LCVLLG
Trigger: TCCTAGGAGCACACAAAGCAACCCAAAGGCTTTTCC...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATTCCAGGGAAAAGCCTTaGGGTTGCTTTGTGTGCTCC +
Preference number: 5 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNSREKP*GCFVCS
Trigger: GGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGA...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TTTAAAAGCCCCCGCCCATGTGTGCACATGACTGTCACACATGGGTTCTACAGAAAGGCTGAAGCACCTTaGACTTTTCTCTCAAAATTT +
Preference number: 5 (lower is better)
Translates to: FKSPRPCVHMTVTHGFYRKAEAP*TFLSKF
Trigger: AAATTTTGAGAGAAAAGTCAAAGGTGCTTCAGCCTT...TCTGTAGAACCCATGTGTGACAGTCATGTGCACACATGGGCGGGGGCTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GAAACCATGACTGGGTACTGTGTCTTGGGTGGTGTGCTTTCGTTTTTGAGACAGGGCTTTTACAAAGCTTaGCGTTTAAACAAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: ETMTGYCVLGGVLSFLRQGFYKA*RLNKAS
Trigger: AGAGGCTTTGTTTAAACGCAAAGCTTTGTAAAAGCC...CTGTCTCAAAAACGAAAGCACACCACCCAAGACACAGTACCCAGTCATGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCAGGTTCAGCTCAGACCTaGTGGCTTTTACAAAGCTTT +
Preference number: 5 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSGSAQT*WLLQSF
Trigger: AAAGCTTTGTAAAAGCCACAAGGTCTGAGCTGAACC...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGTACATTCGTCTGAGTTaGCTAATAACTGGAAGATTC +
Preference number: 5 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNEYIRLS*LITGRF
Trigger: GAATCTTCCAGTTATTAGCAAACTCAGACGAATGTA...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCACAGGGGGCTACATTCGTCTGAGTTaGCTAATAACTGGAAGATTC +
Preference number: 5 (lower is better)
Translates to: WQHKKEQNRFDPLICTGGYIRLS*LITGRF
Trigger: GAATCTTCCAGTTATTAGCAAACTCAGACGAATGTA...GCCCCCTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp AGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCAAAACTGGGTACTGTGTCTaGGGTGGTGTGCTTTCGTTT +
Preference number: 5 (lower is better)
Translates to: SLESFASCMAHSHFVSFKTGYCV*GGVLSF
Trigger: AAACGAAAGCACACCACCCAAGACACAGTACCCAGT...TTTGAAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGAGGTGTGGGCTCCTTTaGATGCTCTCTGAATACTCT +
Preference number: 5 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVRCGLL*MLSEYS
Trigger: AGAGTATTCAGAGAGCATCAAAAGGAGCCCACACCT...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCACTCCTGGGGAGGAATGAGAGTATTATGAGCTACTaGAGGAAAATACCATTCTGC +
Preference number: 5 (lower is better)
Translates to: QCTQPFQLKQVSLLGRNESIMSY*RKIPFC
Trigger: GCAGAATGGTATTTTCCTCAAGTAGCTCATAATACT...CTCATTCCTCCCCAGGAGTGAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATTTCCTCCTTCTGCTGTaGGGTGGTCAAGCCAAAAAG +
Preference number: 5 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNFLLLL*GGQAKK
Trigger: CTTTTTGGCTTGACCACCCAACAGCAGAAGGAGGAA...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATCTGCCGCTCCAGATTTaGCTCTTCTATGTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNLPLQI*LFYVFL
Trigger: CAGGAACACATAGAAGAGCAAAATCTGGAGCGGCAG...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATAGCCTTTGGGTTGCTTaGTGTGCTCCTAGGACTTGT +
Preference number: 5 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNSLWVA*CAPRTC
Trigger: ACAAGTCCTAGGAGCACACAAAGCAACCCAAAGGCT...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCCTACCCCCTCCTCCCTaGATAGCAATGGGTAATATT +
Preference number: 5 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFLPPPP*IAMGNI
Trigger: AATATTACCCATTGCTATCAAGGGAGGAGGGGGTAG...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGGTTCAGCTCAGACCTaGTGGCTTTTACAAAGCTTT +
Preference number: 5 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGGSAQT*WLLQSF
Trigger: AAAGCTTTGTAAAAGCCACAAGGTCTGAGCTGAACC...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp AAAAAGAAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTTGGAGAGGAAGGTGCTaGTTGACTGCTGATAATACT +
Preference number: 5 (lower is better)
Translates to: KKKNCGQSYIGCSLNDNGWRGRC*LTADNT
Trigger: AGTATTATCAGCAGTCAACAAGCACCTTCCTCTCCA...ACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCTTGTCGTATTACTTCTaGAGCAAGAGTAGAGTACTC +
Preference number: 5 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLLSYYF*SKSRVL
Trigger: GAGTACTCTACTCTTGCTCAAGAAGTAATACGACAA...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCATGGCATTTTCTACACTaGTGTGAAACATGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSWHFLH*CETCGS
Trigger: TGAGCCACATGTTTCACACAAGTGTAGAAAATGCCA...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCATTCTTTTCTTCGAAGTaGGGACTGTTGTTCATCTCA +
Preference number: 5 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSFFSSK*GLLFIS
Trigger: TGAGATGAACAACAGTCCCAACTTCGAAGAAAAGAA...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp TCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGCATTGACGTCATTCTTTTCTTCGAAGTaGGGACTGTTGTTCATCTCA +
Preference number: 5 (lower is better)
Translates to: SYIGCSLNDNGDSIALTSFFSSK*GLLFIS
Trigger: TGAGATGAACAACAGTCCCAACTTCGAAGAAAAGAA...TGACGTCAATGCAATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTGATCAAGTTTTAGTGTaGCTAATGGAGCCTTCATGT +
Preference number: 5 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIDQVLV*LMEPSC
Trigger: ACATGAAGGCTCCATTAGCAACACTAAAACTTGATC...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
CDS-3UTR CAA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCAAGAACAGAACCGGTTaGATCCACTCATATGCACAG +
Preference number: 5 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICKNRTG*IHSYAQ
Trigger: CTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTT...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCAAAAGCAAACTGGGCTaGAGGCATAGTAACATGGCA +
Preference number: 5 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFKSKLG*RHSNMA
Trigger: TGCCATGTTACTATGCCTCAAGCCCAGTTTGCTTTT...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTATACATTCGTCTGAGTTaGCTAATAACTGGAAGATTC +
Preference number: 5 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLYIRLS*LITGRF
Trigger: GAATCTTCCAGTTATTAGCAAACTCAGACGAATGTA...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCTGGAGAGGAAGGTGCTaGTTGACTGCTGATAATACT +
Preference number: 5 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICWRGRC*LTADNT
Trigger: AGTATTATCAGCAGTCAACAAGCACCTTCCTCTCCA...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTTTGTCGTATTACTTCTaGAGCAAGAGTAGAGTACTC +
Preference number: 5 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSILSYYF*SKSRVL
Trigger: GAGTACTCTACTCTTGCTCAAGAAGTAATACGACAA...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp GGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGCTCCTACTTAGTTTATTCGTGTaGCCTTACTGGTTTGTATTC +
Preference number: 5 (lower is better)
Translates to: GKKELFQGKAFGLLCVLLLSLFV*PYWFVF
Trigger: GAATACAAACCAGTAAGGCAACACGAATAAACTAAG...TAGGAGCACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp AGTAACAATCTGGTGGGTGTGAAGCTGTGTATACACAGAGCTCTGTACATGCTCAGTATTATGAGCTACTaGAGGAAAATACCATTCTGC +
Preference number: 5 (lower is better)
Translates to: SNNLVGVKLCIHRALYMLSIMSY*RKIPFC
Trigger: GCAGAATGGTATTTTCCTCAAGTAGCTCATAATACT...GAGCATGTACAGAGCTCTGTGTATACACAGCTTCACACCCACCAGATTGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGTTCTTTTCTTCGAAGTaGGGACTGTTGTTCATCTCA +
Preference number: 5 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVFFSSK*GLLFIS
Trigger: TGAGATGAACAACAGTCCCAACTTCGAAGAAAAGAA...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTAAGAACAGAACCGGTTaGATCCACTCATATGCACAG +
Preference number: 5 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCKNRTG*IHSYAQ
Trigger: CTGTGCATATGAGTGGATCAAACCGGTTCTGTTCTT...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGAAAAGCAAACTGGGCTaGAGGCATAGTAACATGGCA +
Preference number: 5 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVKSKLG*RHSNMA
Trigger: TGCCATGTTACTATGCCTCAAGCCCAGTTTGCTTTT...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp AACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCAATTAAGGCTGAAGCACCTTaGACTTTTCTCTCAAAATTT +
Preference number: 5 (lower is better)
Translates to: NCGQSYIGCSLNDNGDSIKAEAP*TFLSKF
Trigger: AAATTTTGAGAGAAAAGTCAAAGGTGCTTCAGCCTT...AATTGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGGTTCAGCTCAGACCTaGTGGCTTTTACAAAGCTTT +
Preference number: 5 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVGSAQT*WLLQSF
Trigger: AAAGCTTTGTAAAAGCCACAAGGTCTGAGCTGAACC...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CACCTGCGTATGGGGTTTACTGTTATAGAATTAAGCACAGGGTACATACAAAATTGGAGAGGAAGGTGCTaGTTGACTGCTGATAATACT +
Preference number: 5 (lower is better)
Translates to: HLRMGFTVIELSTGYIQNWRGRC*LTADNT
Trigger: AGTATTATCAGCAGTCAACAAGCACCTTCCTCTCCA...ATTTTGTATGTACCCTGTGCTTAATTCTATAACAGTAAACCCCATACGCAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CTGGAGCCTGGAATCCTTTGCTTCATGCATGGCACATTCTCATTTTGTAAGCTTCTTAGTTTATTCGTGTaGCCTTACTGGTTTGTATTC +
Preference number: 5 (lower is better)
Translates to: LEPGILCFMHGTFSFCKLLSLFV*PYWFVF
Trigger: GAATACAAACCAGTAAGGCAACACGAATAAACTAAG...AAGCTTACAAAATGAGAATGTGCCATGCATGAAGCAAAGGATTCCAGGCTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGTGGGTGTGCTTTCGTTTTaGAGACAGTTCTTACCTTTT +
Preference number: 5 (lower is better)
Translates to: SLGKKELFQGKAFGLLCVGVLSF*RQFLPF
Trigger: AAAAGGTAAGAACTGTCTCAAAAACGAAAGCACACC...CACACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp AAAAACTGTGGGCAATCCTACATTGGTTGCTCGCTGAATGACAACGGTGATTCACAACAGCTTGGTTACTaGAAAGAATATAGAGATTGC +
Preference number: 5 (lower is better)
Translates to: KNCGQSYIGCSLNDNGDSQQLGY*KEYRDC
Trigger: GCAATCTCTATATTCTTTCAAGTAACCAAGCTGTTG...TGAATCACCGTTGTCATTCAGCGAGCAACCAATGTAGGATTGCCCACAGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGTTCTTTTCTTCGAAGTaGGGACTGTTGTTCATCTCA +
Preference number: 5 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWFFSSK*GLLFIS
Trigger: TGAGATGAACAACAGTCCCAACTTCGAAGAAAAGAA...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp CTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGGTTGTCGTATTACTTCTaGAGCAAGAGTAGAGTACTC +
Preference number: 5 (lower is better)
Translates to: LKIYVCMKTQPTVVTIWWLSYYF*SKSRVL
Trigger: GAGTACTCTACTCTTGCTCAAGAAGTAATACGACAA...CCACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGCCAGATAATTTACTATaGGAAGGTATCCCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVPDNLL*EGIPLQ
Trigger: CTGCAGAGGGATACCTTCCAATAGTAAATTATCTGG...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCAAGGCTGAAGCACCTTaGACTTTTCTCTCAAAATTT +
Preference number: 5 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICKAEAP*TFLSKF
Trigger: AAATTTTGAGAGAAAAGTCAAAGGTGCTTCAGCCTT...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGGGCTTTTACAAAGCTTaGCGTTTAAACAAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWGFYKA*RLNKAS
Trigger: AGAGGCTTTGTTTAAACGCAAAGCTTTGTAAAAGCC...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGATAACTGGAAGATTCTaGGCAGACGTACAAAGCAAA +
Preference number: 5 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVITGRF*ADVQSK
Trigger: TTTGCTTTGTACGTCTGCCAAGAATCTTCCAGTTAT...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp AATAAGCCCTTTTTACTGACAATGCACCCAACCTTTTCAGCTGAAGCAAGTTTCTGTTGCCTTACTGGTTaGTATTCTGATTGTCGTATT +
Preference number: 5 (lower is better)
Translates to: NKPFLLTMHPTFSAEASFCCLTG*YSDCRI
Trigger: AATACGACAATCAGAATACAAACCAGTAAGGCAACA...GAAACTTGCTTCAGCTGAAAAGGTTGGGTGCATTGTCAGTAAAAAGGGCTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp ATAGTAACATGGCAACACAAGAAAGAACAGAACCGGTTTGATCCACTCATATGCTGTTGCCTTACTGGTTaGTATTCTGATTGTCGTATT +
Preference number: 5 (lower is better)
Translates to: IVTWQHKKEQNRFDPLICCCLTG*YSDCRI
Trigger: AATACGACAATCAGAATACAAACCAGTAAGGCAACA...GCATATGAGTGGATCAAACCGGTTCTGTTCTTTCTTGTGTTGCCATGTTACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTGGTGTGCTTTCGTTTTaGAGACAGTTCTTACCTTTT +
Preference number: 5 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCGVLSF*RQFLPF
Trigger: AAAAGGTAAGAACTGTCTCAAAAACGAAAGCACACC...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TTATCTTTAGGTAAGAAAGAGCTTTTCCAGGGAAAAGCCTTTGGGTTGCTTTGTAAGGCTGAAGCACCTTaGACTTTTCTCTCAAAATTT +
Preference number: 5 (lower is better)
Translates to: LSLGKKELFQGKAFGLLCKAEAP*TFLSKF
Trigger: AAATTTTGAGAGAAAAGTCAAAGGTGCTTCAGCCTT...ACAAAGCAACCCAAAGGCTTTTCCCTGGAAAAGCTCTTTCTTACCTAAAGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS-3UTR CAA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGTTGCCTTACTGGTTaGTATTCTGATTGTCGTATT +
Preference number: 5 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWCCLTG*YSDCRI
Trigger: AATACGACAATCAGAATACAAACCAGTAAGGCAACA...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGTGCTTAGTTTATTCGTGTaGCCTTACTGGTTTGTATTC +
Preference number: 5 (lower is better)
Translates to: SQNLRLYENPTHCSNNLVLSLFV*PYWFVF
Trigger: GAATACAAACCAGTAAGGCAACACGAATAAACTAAG...CACCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS-3UTR CAA 90 bp TCTCTCAAAATTTACGTCTGTATGAAAACCCAACCCACTGTAGTAACAATCTGGCAACAGCTTGGTTACTaGAAAGAATATAGAGATTGC +
Preference number: 5 (lower is better)
Translates to: SLKIYVCMKTQPTVVTIWQQLGY*KEYRDC
Trigger: GCAATCTCTATATTCTTTCAAGTAACCAAGCTGTTG...CCAGATTGTTACTACAGTGGGTTGGGTTTTCATACAGACGTAAATTTTGAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000412692.5
CDS CCA 72 bp CGCAGCGCGGCGGCAAAGCTGGAGGATGGCGCGGCCTaGGCCGACAGCGCGCTGCTGGTGGCGGGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: RSAAAKLEDGAA*ADSALLVAGLP
Trigger: CGGCAGCCCCGCCACCAGCAGCGCGCTGTCGGCCCAGGCCGCGCCATCCTCCAGCTTTGCCGCCGCGCTGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000637419.1
CDS CAA 90 bp CCGCCACGGCGGCCGCCTGCGCCCGCGTCGCACTGGTGGGGCCGCTaGAGCCAGTACATGCGCTTGTCCACCGGCGTGCGGGCGCGCTCG +
Preference number: 6 (lower is better)
Translates to: PPRRPPAPASHWWGR*SQYMRLSTGVRARS
Trigger: CGAGCGCGCCCGCACGCCGGTGGACAAGCGCATGTACTGGCTCAAGCGGCCCCACCAGTGCGACGCGGGCGCAGGCGGCCGCCGTGGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CCA 72 bp CCTGGGGCCTCTGGGCAGGGTCTCCGTGGGGGCGCGTaGCCGGGTCTCGGACTCCCGGGTGGGAGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: PGASGQGLRGGA*PGLGLPGGRVA
Trigger: AGCCACCCTCCCACCCGGGAGTCCGAGACCCGGCCACGCGCCCCCACGGAGACCCTGCCCAGAGGCCCCAGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568080.1
ENST00000637419.1
CDS GCA 72 bp TCCACCGGCGTGCGGGCGCGCTCGAAGGCGGCCCACTaGTCGCCCAGGAAGCAGCGGCACACGGCGCACACC +
Preference number: 6 (lower is better)
Translates to: STGVRARSKAAH*SPRKQRHTAHT
Trigger: GGTGTGCGCCGTGTGCCGCTGCTTCCTGGGCGAGCAGTGGGCCGCCTTCGAGCGCGCCCGCACGCCGGTGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CCA 72 bp GGCGAGCTTGCGCAGCGCGGCGGCAAAGCTGGAGGATaGCGCGGCCTGGGCCGACAGCGCGCTGCTGGTGGC +
Preference number: 6 (lower is better)
Translates to: GELAQRGGKAGG*RGLGRQRAAGG
Trigger: GCCACCAGCAGCGCGCTGTCGGCCCAGGCCGCGCCATCCTCCAGCTTTGCCGCCGCGCTGCGCAAGCTCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000637419.1
CDS CCA 72 bp CTGCTCAGTGAGGACCCTGCGGACGCTGGCCGGCCCTaGCACGGCGCGGGGGTGCTGCTTCCCCGCACGACC +
Preference number: 6 (lower is better)
Translates to: LLSEDPADAGRP*HGAGVLLPRTT
Trigger: GGTCGTGCGGGGAAGCAGCACCCCCGCGCCGTGCCAGGGCCGGCCAGCGTCCGCAGGGTCCTCACTGAGCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405402.6
CDS TCA 72 bp GGCCGCCTGCGCCCGCGTCGCACTGGTGGGGCCGCTTaGGCCAGTACATGCGCTTGTCCACCGGCGTGCGGG +
Preference number: 6 (lower is better)
Translates to: GRLRPRRTGGAA*ASTCACPPACG
Trigger: CCCGCACGCCGGTGGACAAGCGCATGTACTGGCTCAAGCGGCCCCACCAGTGCGACGCGGGCGCAGGCGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CCA 72 bp CCGCCACGGCGGCCGCCTGCGCCCGCGTCGCACTGGTaGGGCCGCTTGAGCCAGTACATGCGCTTGTCCACC +
Preference number: 6 (lower is better)
Translates to: PPRRPPAPASHW*GRLSQYMRLST
Trigger: GGTGGACAAGCGCATGTACTGGCTCAAGCGGCCCCACCAGTGCGACGCGGGCGCAGGCGGCCGCCGTGGCGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 72 bp CGGCCGCCTGCGCCCGCGTCGCACTGGTGGGGCCGCTaGAGCCAGTACATGCGCTTGTCCACCGGCGTGCGG +
Preference number: 6 (lower is better)
Translates to: RPPAPASHWWGR*SQYMRLSTGVR
Trigger: CCGCACGCCGGTGGACAAGCGCATGTACTGGCTCAAGCGGCCCCACCAGTGCGACGCGGGCGCAGGCGGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 90 bp GTCCCCGCGCCCGCCGCCGGCTGCTTCACCTGCAGCTTCAGCTCCTaGCCGCGCCCGATGCCGCCGCCGCAGATGAAGCAGGAGAGCGGC +
Preference number: 6 (lower is better)
Translates to: VPAPAAGCFTCSFSS*PRPMPPPQMKQESG
Trigger: GCCGCTCTCCTGCTTCATCTGCGGCGGCGGCATCGGGCGCGGCAAGGAGCTGAAGCTGCAGGTGAAGCAGCCGGCGGCGGGCGCGGGGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 90 bp GCGCCCGCGTCGCACTGGTGGGGCCGCTTGAGCCAGTACATGCGCTaGTCCACCGGCGTGCGGGCGCGCTCGAAGGCGGCCCACTGCTCG +
Preference number: 6 (lower is better)
Translates to: APASHWWGRLSQYMR*STGVRARSKAAHCS
Trigger: CGAGCAGTGGGCCGCCTTCGAGCGCGCCCGCACGCCGGTGGACAAGCGCATGTACTGGCTCAAGCGGCCCCACCAGTGCGACGCGGGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS GCA 72 bp TGGTCCTGGCCTGGTGGTGCTCTCCGGCCTGTGCTCTaGCTCCGCCGGCACCGGGGGCCGGCCCATATCCAG +
Preference number: 6 (lower is better)
Translates to: WSWPGGALRPVL*LRRHRGPAHIQ
Trigger: CTGGATATGGGCCGGCCCCCGGTGCCGGCGGAGGCAGAGCACAGGCCGGAGAGCACCACCAGGCCAGGACCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS GCA 72 bp CGGTTTGGTCCTGGCCTGGTGGTGCTCTCCGGCCTGTaGTCTGCCTCCGCCGGCACCGGGGGCCGGCCCATA +
Preference number: 6 (lower is better)
Translates to: RFGPGLVVLSGL*SASAGTGGRPI
Trigger: TATGGGCCGGCCCCCGGTGCCGGCGGAGGCAGAGCACAGGCCGGAGAGCACCACCAGGCCAGGACCAAACCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 72 bp CCTGTTTGGCGAGCTTGCGCAGCGCGGCGGCAAAGCTaGAGGATGGCGCGGCCTGGGCCGACAGCGCGCTGC +
Preference number: 6 (lower is better)
Translates to: PVWRACAARRQS*RMARPGPTARC
Trigger: GCAGCGCGCTGTCGGCCCAGGCCGCGCCATCCTCCAGCTTTGCCGCCGCGCTGCGCAAGCTCGCCAAACAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000637419.1
CDS GCA 72 bp GGTTGGTGGCCGGAGAGGACACGGGGGACGACTCGCTaGTCAGTGAGGACCCTGCGGACGCTGGCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: GWWPERTRGTTR*SVRTLRTLAGP
Trigger: AGGGCCGGCCAGCGTCCGCAGGGTCCTCACTGAGCAGCGAGTCGTCCCCCGTGTCCTCTCCGGCCACCAACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405402.6
CDS GCA 72 bp CAGCGGGGCCCCGCAGATGTAGCAGCAAAGGCCTTCTaGTGGTGCCGCCCGGCTGTCCTGGAGAGCCCGGGG +
Preference number: 6 (lower is better)
Translates to: QRGPADVAAKAF*WCRPAVLESPG
Trigger: CCCCGGGCTCTCCAGGACAGCCGGGCGGCACCAGCAGAAGGCCTTTGCTGCTACATCTGCGGGGCCCCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CCA 72 bp GGGTCAGCTGCTCCGAGGGCTTGCCCCGCTCCTCAGTaGCATGGCCACGCAGCCCATGCAGCTCGGCCACGG +
Preference number: 6 (lower is better)
Translates to: GSAAPRACPAPQ*HGHAAHAARPR
Trigger: CCGTGGCCGAGCTGCATGGGCTGCGTGGCCATGCCACTGAGGAGCGGGGCAAGCCCTCGGAGCAGCTGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 72 bp CCGTGGGGGCGCGTGGCCGGGTCTCGGACTCCCGGGTaGGAGGGTGGCTGGCTGCAGATGCTTCCAGAGATC +
Preference number: 6 (lower is better)
Translates to: PWGRVAGSRTPG*EGGWLQMLPEI
Trigger: GATCTCTGGAAGCATCTGCAGCCAGCCACCCTCCCACCCGGGAGTCCGAGACCCGGCCACGCGCCCCCACGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568080.1
ENST00000637419.1
CDS CAA 72 bp TCGCACTGGTGGGGCCGCTTGAGCCAGTACATGCGCTaGTCCACCGGCGTGCGGGCGCGCTCGAAGGCGGCC +
Preference number: 6 (lower is better)
Translates to: SHWWGRLSQYMR*STGVRARSKAA
Trigger: GGCCGCCTTCGAGCGCGCCCGCACGCCGGTGGACAAGCGCATGTACTGGCTCAAGCGGCCCCACCAGTGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 90 bp CCGCTGGGCACCAGGGCGCCATTGAGCGGCGAGGGGGTGAGGGGGTaGACGGTGGCGGTGGTCCTGGTCGCGGTGGAAAGCATCCCTAGC +
Preference number: 6 (lower is better)
Translates to: PLGTRAPLSGEGVRG*TVAVVLVAVESIPS
Trigger: GCTAGGGATGCTTTCCACCGCGACCAGGACCACCGCCACCGTCAACCCCCTCACCCCCTCGCCGCTCAATGGCGCCCTGGTGCCCAGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000637419.1
CDS CAA 90 bp CTGCTCAGTGAGGACCCTCTGGGCTCCTCCGCCTGTTTGGCGAGCTaGCGCAGCGCGGCGGCAAAGCTGGAGGATGGCGCGGCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: LLSEDPLGSSACLAS*RSAAAKLEDGAAWA
Trigger: GGCCCAGGCCGCGCCATCCTCCAGCTTTGCCGCCGCGCTGCGCAAGCTCGCCAAACAGGCGGAGGAGCCCAGAGGGTCCTCACTGAGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS CAA 90 bp GGGCCCATGGGCACGCGCTTGGGTGTGCTGGCGGGGGAGCTGTGGTaGGTGGCCGGAGAGGACACGGGGGACGACTCGCTGCTCAGTGAG +
Preference number: 6 (lower is better)
Translates to: GPMGTRLGVLAGELW*VAGEDTGDDSLLSE
Trigger: CTCACTGAGCAGCGAGTCGTCCCCCGTGTCCTCTCCGGCCACCAACCACAGCTCCCCCGCCAGCACACCCAAGCGCGTGCCCATGGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000411612.5
ENST00000635906.1
CDS GCA 72 bp AGGACCCTCTGGGCTCCTCCGCCTGTTTGGCGAGCTTaGGCAGCGCGGCGGCAAAGCTGGAGGATGGCGCGG +
Preference number: 6 (lower is better)
Translates to: RTLWAPPPVWRA*AARRQSWRMAR
Trigger: CCGCGCCATCCTCCAGCTTTGCCGCCGCGCTGCGCAAGCTCGCCAAACAGGCGGAGGAGCCCAGAGGGTCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS GCA 72 bp TCCCCGAAGGTGGCCGCCTGTGGGAGGGAGGCCCGCTaGTGGCCCAGGATGGTCTGGGTGGACTTCTCGAGC +
Preference number: 6 (lower is better)
Translates to: SPKVAACGREAR*WPRMVWVDFSS
Trigger: GCTCGAGAAGTCCACCCAGACCATCCTGGGCCAGCAGCGGGCCTCCCTCCCACAGGCGGCCACCTTCGGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000479488.1
CDS CCA 72 bp ACGGCTGCCTGGCGGCTGGGCTCAAATGCAGCCGGGTaGCTGTGCAGAGAGTGGCTTTCGGCCCGCCGCGTC +
Preference number: 6 (lower is better)
Translates to: TAAWRLGSNAAG*LCREWLSARRV
Trigger: GACGCGGCGGGCCGAAAGCCACTCTCTGCACAGCCACCCGGCTGCATTTGAGCCCAGCCGCCAGGCAGCCGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CAA 72 bp ACCAGGGCGCCATTGAGCGGCGAGGGGGTGAGGGGGTaGACGGTGGCGGTGGTCCTGGTCGCGGTGGAAAGC +
Preference number: 6 (lower is better)
Translates to: TRAPLSGEGVRG*TVAVVLVAVES
Trigger: GCTTTCCACCGCGACCAGGACCACCGCCACCGTCAACCCCCTCACCCCCTCGCCGCTCAATGGCGCCCTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253458.12
ENST00000637419.1
CDS CAA 72 bp GAGGACCCTCTGGGCTCCTCCGCCTGTTTGGCGAGCTaGCGCAGCGCGGCGGCAAAGCTGGAGGATGGCGCG +
Preference number: 6 (lower is better)
Translates to: EDPLGSSACLAS*RSAAAKLEDGA
Trigger: CGCGCCATCCTCCAGCTTTGCCGCCGCGCTGCGCAAGCTCGCCAAACAGGCGGAGGAGCCCAGAGGGTCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS CAA 90 bp GCTGGGCACCGTGTGGTGTGGGGTGGGCACCGGATGCAAGGGGTGTaGGACGGGCTTGGGCGCCTGCAGGCCGGCATCCTTCAGCTTCTC +
Preference number: 6 (lower is better)
Translates to: AGHRVVWGGHRMQGV*DGLGRLQAGILQLL
Trigger: GAGAAGCTGAAGGATGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCCGGTGCCCACCCCACACCACACGGTGCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS TCA 72 bp GCTCCTTCTCGCCCAAGCGGCTGGCGGGGTTCACGTTaGGCTGGAACTCCTTCCCGGGGCCCAGCTCAGCCC +
Preference number: 6 (lower is better)
Translates to: APSRPSGWRGSR*AGTPSRGPAQP
Trigger: GGGCTGAGCTGGGCCCCGGGAAGGAGTTCCAGCTCAACGTGAACCCCGCCAGCCGCTTGGGCGAGAAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574293.1
ENST00000637419.1
CDS TCA 72 bp GGAAGGGGAAATGCATGGCGCTCCTGGCGTTGCCGTTaGGGATCCTGGAGGGGACCGCCCGGGCATCCGGGG +
Preference number: 6 (lower is better)
Translates to: GRGNAWRSWRCR*GSWRGPPGHPG
Trigger: CCCCGGATGCCCGGGCGGTCCCCTCCAGGATCCTCAACGGCAACGCCAGGAGCGCCATGCATTTCCCCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS GCA 72 bp GCAGAAGACCCGCTCCACCTTCACCAGCGGCACGGCTaGCTGGCGGCTGGGCTCAAATGCAGCCGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: AEDPLHLHQRHG*LAAGLKCSRVA
Trigger: AGCCACCCGGCTGCATTTGAGCCCAGCCGCCAGGCAGCCGTGCCGCTGGTGAAGGTGGAGCGGGTCTTCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 72 bp GTGTGGTGTGGGGTGGGCACCGGATGCAAGGGGTGTTaGACGGGCTTGGGCGCCTGCAGGCCGGCATCCTTC +
Preference number: 6 (lower is better)
Translates to: VWCGVGTGCKGC*TGLGACRPASF
Trigger: GAAGGATGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCCGGTGCCCACCCCACACCACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 72 bp CCGAAGGTGGCCGCCTGTGGGAGGGAGGCCCGCTGCTaGCCCAGGATGGTCTGGGTGGACTTCTCGAGCTCA +
Preference number: 6 (lower is better)
Translates to: PKVAACGREARC*PRMVWVDFSSS
Trigger: TGAGCTCGAGAAGTCCACCCAGACCATCCTGGGCCAGCAGCGGGCCTCCCTCCCACAGGCGGCCACCTTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000479488.1
CDS CCA 72 bp TCCACCTGGTACTGCCGGGACCAGGCGCTGACAGCGTaGTGGGAGCTGCGGGCCTCATGCTGCAGCCACTGG +
Preference number: 6 (lower is better)
Translates to: STWYCRDQALTA*WELRASCCSHW
Trigger: CCAGTGGCTGCAGCATGAGGCCCGCAGCTCCCACCACGCTGTCAGCGCCTGGTCCCGGCAGTACCAGGTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574293.1
ENST00000637419.1
CDS CAA 72 bp CGTGTGGTGTGGGGTGGGCACCGGATGCAAGGGGTGTaGGACGGGCTTGGGCGCCTGCAGGCCGGCATCCTT +
Preference number: 6 (lower is better)
Translates to: RVVWGGHRMQGV*DGLGRLQAGIL
Trigger: AAGGATGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCCGGTGCCCACCCCACACCACACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CAA 72 bp GGCTCCTTCTCGCCCAAGCGGCTGGCGGGGTTCACGTaGAGCTGGAACTCCTTCCCGGGGCCCAGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: GSFSPKRLAGFT*SWNSFPGPSSA
Trigger: GGCTGAGCTGGGCCCCGGGAAGGAGTTCCAGCTCAACGTGAACCCCGCCAGCCGCTTGGGCGAGAAGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574293.1
ENST00000637419.1
CDS CAA 90 bp CAGGCCCGGTACAGGGCCCAGACATCCTCCAGGACGCTGAAGCACTaGGGGCAGCTGCGGACTTCACAGCGCTTGTTGGGGCCCTGGGCG +
Preference number: 6 (lower is better)
Translates to: QARYRAQTSSRTLKH*GQLRTSQRLLGPWA
Trigger: CGCCCAGGGCCCCAACAAGCGCTGTGAAGTCCGCAGCTGCCCCAAGTGCTTCAGCGTCCTGGAGGATGTCTGGGCCCTGTACCGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS TCA 72 bp CCCCTGCCTTCTCCTGAGGGAGCGGGGGCTCCACAATaGGGCGTTCCCGACCTCCACTGCTGCTCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: PLPSPEGAGAPQ*GVPDLHCCSWS
Trigger: GCTCCAGGAGCAGCAGTGGAGGTCGGGAACGCCTCATTGTGGAGCCCCCGCTCCCTCAGGAGAAGGCAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000411612.5
CDS TCA 72 bp GCCAGACATGCGCTCCGAGTGCAGCGCTGCCAGGGATaGGTGGGAGAGCTCGGGAGGGTAGCGGACCCCAGA +
Preference number: 6 (lower is better)
Translates to: ARHALRVQRCQG*VGELGRVADPR
Trigger: TCTGGGGTCCGCTACCCTCCCGAGCTCTCCCACTCATCCCTGGCAGCGCTGCACTCGGAGCGCATGTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS TCA 72 bp CCAAAGTGCTGCGGAGGGTCACGGCCACCTGGCTCGTaGCGGTTTGGTCCTGGCCTGGTGGTGCTCTCCGGC +
Preference number: 6 (lower is better)
Translates to: PKCCGGSRPPGS*RFGPGLVVLSG
Trigger: GCCGGAGAGCACCACCAGGCCAGGACCAAACCGTCACGAGCCAGGTGGCCGTGACCCTCCGCAGCACTTTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS GCA 72 bp GGTTGGTGGCCGGAGAGGACACGGGGGACGACTCGCTaGTCAGTGAGGACCCTCTGGGCTCCTCCGCCTGTT +
Preference number: 6 (lower is better)
Translates to: GWWPERTRGTTR*SVRTLWAPPPV
Trigger: AACAGGCGGAGGAGCCCAGAGGGTCCTCACTGAGCAGCGAGTCGTCCCCCGTGTCCTCTCCGGCCACCAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS GCA 72 bp TCTCTGCTCGGGTTGGGGTCAGCTGCTCCGAGGGCTTaGCCCGCTCCTCAGTGGCATGGCCACGCAGCCCAT +
Preference number: 6 (lower is better)
Translates to: SLLGLGSAAPRA*PAPQWHGHAAH
Trigger: ATGGGCTGCGTGGCCATGCCACTGAGGAGCGGGGCAAGCCCTCGGAGCAGCTGACCCCAACCCGAGCAGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS GCA 72 bp GCTCCTCAACTCCGCCACGCTGTGGGAGAGCTGCTCTaGCGTCAGGCTGAGGCTGTAGTGCCGGGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: APQLRHAVGELL*RQAEAVVPGLQ
Trigger: CTGGAGGCCCGGCACTACAGCCTCAGCCTGACGGCAGAGCAGCTCTCCCACAGCGTGGCGGAGTTGAGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000469381.1
ENST00000496345.1
CDS GCA 72 bp GGGAAACCCCATCGCCACGCTGTGGGAGAGCTGCTCTaGCGTCAGGCTGAGGCTGTAGTGCCGGGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: GKPHRHAVGELL*RQAEAVVPGLQ
Trigger: CTGGAGGCCCGGCACTACAGCCTCAGCCTGACGGCAGAGCAGCTCTCCCACAGCGTGGCGATGGGGTTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438180.1
CDS CCA 72 bp TGCTCAGTGAGGACCCTCTGGGCTCCTCCGCCTGTTTaGCGAGCTTGCGCAGCGCGGCGGCAAAGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: CSVRTLWAPPPV*RACAARRQSWR
Trigger: CCTCCAGCTTTGCCGCCGCGCTGCGCAAGCTCGCCAAACAGGCGGAGGAGCCCAGAGGGTCCTCACTGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS CCA 72 bp GCCGGAAGCTTCTCAGGTAGTCCTCGGTCACGGTACTaGGGGGCACCACGTGGTGCACGGGCCGCTGGAGGT +
Preference number: 6 (lower is better)
Translates to: AGSFSGSPRSRY*GAPRGARAAGG
Trigger: ACCTCCAGCGGCCCGTGCACCACGTGGTGCCCCCCAGTACCGTGACCGAGGACTACCTGAGAAGCTTCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000411612.5
ENST00000412692.5
CDS CCA 72 bp GGGTGGGCACCGGATGCAAGGGGTGTTGGACGGGCTTaGGCGCCTGCAGGCCGGCATCCTTCAGCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: GWAPDARGVGRA*APAGRHPSASL
Trigger: CAGAGAAGCTGAAGGATGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCCGGTGCCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 72 bp GCTCCACCTTCACCAGCGGCACGGCTGCCTGGCGGCTaGGCTCAAATGCAGCCGGGTGGCTGTGCAGAGAGT +
Preference number: 6 (lower is better)
Translates to: APPSPAARLPGG*AQMQPGGCAES
Trigger: ACTCTCTGCACAGCCACCCGGCTGCATTTGAGCCCAGCCGCCAGGCAGCCGTGCCGCTGGTGAAGGTGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 72 bp AGGCTCCCTCCCTCTCGTGGTGGCGGCGGAGGTGGCTaGTACTTGTCCAGAGGGGCAGGCTCACGCTTCCGT +
Preference number: 6 (lower is better)
Translates to: RLPPSRGGGGGG*YLSRGAGSRFR
Trigger: ACGGAAGCGTGAGCCTGCCCCTCTGGACAAGTACCAGCCACCTCCGCCGCCACCACGAGAGGGAGGGAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 72 bp CTCCAGGCTCCCTCCCTCTCGTGGTGGCGGCGGAGGTaGCTGGTACTTGTCCAGAGGGGCAGGCTCACGCTT +
Preference number: 6 (lower is better)
Translates to: LQAPSLSWWRRR*LVLVQRGRLTL
Trigger: AAGCGTGAGCCTGCCCCTCTGGACAAGTACCAGCCACCTCCGCCGCCACCACGAGAGGGAGGGAGCCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 72 bp GGGGTCCTCGAAGTGTGGGCCGTAGCTGGCTGCGCCTaGTGGGAGAAGAGCTTCATGGGGCGAACCCGCCAG +
Preference number: 6 (lower is better)
Translates to: GVLEVWAVAGCA*WEKSFMGRTRQ
Trigger: CTGGCGGGTTCGCCCCATGAAGCTCTTCTCCCACCAGGCGCAGCCAGCTACGGCCCACACTTCGAGGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469381.1
ENST00000479488.1
CDS CAA 72 bp CTGCTCAGTGAGGACCCTCTGGGCTCCTCCGCCTGTTaGGCGAGCTTGCGCAGCGCGGCGGCAAAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: LLSEDPLGSSAC*ASLRSAAAKLE
Trigger: CTCCAGCTTTGCCGCCGCGCTGCGCAAGCTCGCCAAACAGGCGGAGGAGCCCAGAGGGTCCTCACTGAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS CAA 72 bp GGGGTGGGCACCGGATGCAAGGGGTGTTGGACGGGCTaGGGCGCCTGCAGGCCGGCATCCTTCAGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: GVGTGCKGCWTG*GACRPASFSFS
Trigger: AGAGAAGCTGAAGGATGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCCGGTGCCCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CAA 72 bp AGGAAGGGGAAATGCATGGCGCTCCTGGCGTTGCCGTaGAGGATCCTGGAGGGGACCGCCCGGGCATCCGGG +
Preference number: 6 (lower is better)
Translates to: RKGKCMALLALP*RILEGTARASG
Trigger: CCCGGATGCCCGGGCGGTCCCCTCCAGGATCCTCAACGGCAACGCCAGGAGCGCCATGCATTTCCCCTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 90 bp GTGTGGTGTGGGGTGGGCACCGGATGCAAGGGGTGTTGGACGGGCTaGGGCGCCTGCAGGCCGGCATCCTTCAGCTTCTCTGCTCGGGTT +
Preference number: 6 (lower is better)
Translates to: VWCGVGTGCKGCWTG*GACRPASFSFSARV
Trigger: AACCCGAGCAGAGAAGCTGAAGGATGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCCGGTGCCCACCCCACACCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS TCA 72 bp GGGGCGGCTGCTCGGCCACGCAACGGAGGTGGGCCCTaGCCTCCTCCTCATCGCTCTCGTCGTAAGAGTCAT +
Preference number: 6 (lower is better)
Translates to: GAAARPRNGGGP*PPPHRSRRKSH
Trigger: ATGACTCTTACGACGAGAGCGATGAGGAGGAGGTCAGGGCCCACCTCCGTTGCGTGGCCGAGCAGCCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000469381.1
ENST00000479488.1
CDS GCA 72 bp CAGAGGGGCAGGCTCACGCTTCCGTGGCCCCTCCTCTaGTTTCTCCGGGCAGAAGACCCGCTCCACCTTCAC +
Preference number: 6 (lower is better)
Translates to: QRGRLTLPWPLL*FLRAEDPLHLH
Trigger: GTGAAGGTGGAGCGGGTCTTCTGCCCGGAGAAAGCAGAGGAGGGGCCACGGAAGCGTGAGCCTGCCCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS GCA 72 bp GAGGTGGAGCTTCCGGGGCCCCGGCCAAGAAACACCTaGTGCTGTCGCCGCCGAGGACACACCCAAACGCAA +
Preference number: 6 (lower is better)
Translates to: EVELPGPRPRNT*CCRRRGHTQTQ
Trigger: TTGCGTTTGGGTGTGTCCTCGGCGGCGACAGCAGCAGGTGTTTCTTGGCCGGGGCCCCGGAAGCTCCACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411612.5
CDS GCA 72 bp CCTCCTGGGGTCCTCGAAGTGTGGGCCGTAGCTGGCTaGGCCTGGTGGGAGAAGAGCTTCATGGGGCGAACC +
Preference number: 6 (lower is better)
Translates to: PPGVLEVWAVAG*AWWEKSFMGRT
Trigger: GGTTCGCCCCATGAAGCTCTTCTCCCACCAGGCGCAGCCAGCTACGGCCCACACTTCGAGGACCCCAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469381.1
ENST00000479488.1
CDS GCA 72 bp CCTCTTGGACAAGAGGGCCTTGCCAGGGATCCTGAATaGTCCTCAGGACGCTGGCCCGGGCCTCGGGAACCC +
Preference number: 6 (lower is better)
Translates to: PLGQEGLARDPE*SSGRWPGPREP
Trigger: GGGTTCCCGAGGCCCGGGCCAGCGTCCTGAGGAGCATTCAGGATCCCTGGCAAGGCCCTCTTGTCCAAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS GCA 72 bp CGCTGCAGGACTGGCACGTTGGCCAGCTCGAAGCTCTaGCACTGCTGCGTGAGGGAGGAGAAGCAGCTGGCG +
Preference number: 6 (lower is better)
Translates to: RCRTGTLASSKL*HCCVREEKQLA
Trigger: CGCCAGCTGCTTCTCCTCCCTCACGCAGCAGTGGCAGAGCTTCGAGCTGGCCAACGTGCCAGTCCTGCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS GCA 72 bp GCGGAGAAGGCCTGGTGGTACCTGCCCAGGAAGCCCTaGACGGAGGTGATGAGCTCCTCGTTCTGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: AEKAWWYLPRKP*TEVMSSSFWQA
Trigger: GGCCTGCCAGAACGAGGAGCTCATCACCTCCGTGCAGGGCTTCCTGGGCAGGTACCACCAGGCCTTCTCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CCA 72 bp GCCATGGTTGGAGATGAGGCTGGGCACCGTGTGGTGTaGGGTGGGCACCGGATGCAAGGGGTGTTGGACGGG +
Preference number: 6 (lower is better)
Translates to: AMVGDEAGHRVV*GGHRMQGVLDG
Trigger: CCCGTCCAACACCCCTTGCATCCGGTGCCCACCCCACACCACACGGTGCCCAGCCTCATCTCCAACCATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 72 bp GAACTCATCATAGATGTAGGCAGGGTCGGGGGCCCGTaGCACTGGGGGCCGGTAGGGCGAGCCAGGCTTCAG +
Preference number: 6 (lower is better)
Translates to: ELIIDVGRVGGP*HWGPVGRARLQ
Trigger: CTGAAGCCTGGCTCGCCCTACCGGCCCCCAGTGCCACGGGCCCCCGACCCTGCCTACATCTATGATGAGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000479488.1
CDS CCA 72 bp GTCCTCGAAGTGTGGGCCGTAGCTGGCTGCGCCTGGTaGGAGAAGAGCTTCATGGGGCGAACCCGCCAGGAC +
Preference number: 6 (lower is better)
Translates to: VLEVWAVAGCAW*EKSFMGRTRQD
Trigger: GTCCTGGCGGGTTCGCCCCATGAAGCTCTTCTCCCACCAGGCGCAGCCAGCTACGGCCCACACTTCGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469381.1
ENST00000479488.1
CDS CCA 72 bp CAGCAAAGGCCTTCTGCTGGTGCCGCCCGGCTGTCCTaGAGAGCCCGGGGGACACGGCCACTGTTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: QQRPSAGAARLS*RARGTRPLFFS
Trigger: AGAGAAGAACAGTGGCCGTGTCCCCCGGGCTCTCCAGGACAGCCGGGCGGCACCAGCAGAAGGCCTTTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 72 bp AGGCTGAGGAAGGGGAAATGCATGGCGCTCCTGGCGTaGCCGTTGAGGATCCTGGAGGGGACCGCCCGGGCA +
Preference number: 6 (lower is better)
Translates to: RLRKGKCMALLA*PLRILEGTARA
Trigger: TGCCCGGGCGGTCCCCTCCAGGATCCTCAACGGCAACGCCAGGAGCGCCATGCATTTCCCCTTCCTCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 90 bp TGGCTGTGCAGAGAGTGGCTTTCGGCCCGCCGCGTCTCCAAGGTGTaGTCCATCAGGGACACGGGGTTCCAGAGGGCCGTGGGTGCAGCA +
Preference number: 6 (lower is better)
Translates to: WLCREWLSARRVSKV*SIRDTGFQRAVGAA
Trigger: TGCTGCACCCACGGCCCTCTGGAACCCCGTGTCCCTGATGGACAACACCTTGGAGACGCGGCGGGCCGAAAGCCACTCTCTGCACAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CAA 90 bp AGGCCCTTTCATGCCGTCTGCAGGGGCCTCTTGGACAAGAGGGCCTaGCCAGGGATCCTGAATGCTCCTCAGGACGCTGGCCCGGGCCTC +
Preference number: 6 (lower is better)
Translates to: RPFHAVCRGLLDKRA*PGILNAPQDAGPGL
Trigger: GAGGCCCGGGCCAGCGTCCTGAGGAGCATTCAGGATCCCTGGCAAGGCCCTCTTGTCCAAGAGGCCCCTGCAGACGGCATGAAAGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS TCA 72 bp AGGCCCGGTACAGGGCCCAGACATCCTCCAGGACGCTaGAGCACTTGGGGCAGCTGCGGACTTCACAGCGCT +
Preference number: 6 (lower is better)
Translates to: RPGTGPRHPPGR*STWGSCGLHSA
Trigger: AGCGCTGTGAAGTCCGCAGCTGCCCCAAGTGCTTCAGCGTCCTGGAGGATGTCTGGGCCCTGTACCGGGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS GCA 72 bp GCATCCTTCAGCTTCTCTGCTCGGGTTGGGGTCAGCTaGTCCGAGGGCTTGCCCCGCTCCTCAGTGGCATGG +
Preference number: 6 (lower is better)
Translates to: ASFSFSARVGVS*SEGLPRSSVAW
Trigger: CCATGCCACTGAGGAGCGGGGCAAGCCCTCGGAGCAGCTGACCCCAACCCGAGCAGAGAAGCTGAAGGATGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS GCA 72 bp ACCGGATGCAAGGGGTGTTGGACGGGCTTGGGCGCCTaGAGGCCGGCATCCTTCAGCTTCTCTGCTCGGGTT +
Preference number: 6 (lower is better)
Translates to: TGCKGCWTGLGA*RPASFSFSARV
Trigger: AACCCGAGCAGAGAAGCTGAAGGATGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACCCCTTGCATCCGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS GCA 72 bp AGTGGCTCTGCCAGAGGGAGGCCCTTTCATGCCGTCTaGAGGGGCCTCTTGGACAAGAGGGCCTTGCCAGGG +
Preference number: 6 (lower is better)
Translates to: SGSARGRPFHAV*RGLLDKRALPG
Trigger: CCCTGGCAAGGCCCTCTTGTCCAAGAGGCCCCTGCAGACGGCATGAAAGGGCCTCCCTCTGGCAGAGCCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CCA 72 bp TGCCGCGCCAGCCACTTCTCCTCCTCATTGGTGCGCTaGATCAGCAGGGCTGTGGCAGCACTGCTGCTAGGC +
Preference number: 6 (lower is better)
Translates to: CRASHFSSSLVR*ISRAVAALLLG
Trigger: GCCTAGCAGCAGTGCTGCCACAGCCCTGCTGATCCAGCGCACCAATGAGGAGGAGAAGTGGCTGGCGCGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 72 bp CTGGTACTTGTCCAGAGGGGCAGGCTCACGCTTCCGTaGCCCCTCCTCTGCTTTCTCCGGGCAGAAGACCCG +
Preference number: 6 (lower is better)
Translates to: LVLVQRGRLTLP*PLLCFLRAEDP
Trigger: CGGGTCTTCTGCCCGGAGAAAGCAGAGGAGGGGCCACGGAAGCGTGAGCCTGCCCCTCTGGACAAGTACCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 72 bp CACCAGGCTTCCCTGGGATCCATGGCTCCCAGTAGCTaGGTGGTCCCCTGGGCTGACAAGACCTCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: HQASLGSMAPSS*VVPWADKTSLL
Trigger: GAGGAGGGAGGTCTTGTCAGCCCAGGGGACCACCCAGCTACTGGGAGCCATGGATCCCAGGGAAGCCTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS CCA 72 bp TGCAGGACCGCAGACACCAGGCTTCCCTGGGATCCATaGCTCCCAGTAGCTGGGTGGTCCCCTGGGCTGACA +
Preference number: 6 (lower is better)
Translates to: CRTADTRLPWDP*LPVAGWSPGLT
Trigger: TGTCAGCCCAGGGGACCACCCAGCTACTGGGAGCCATGGATCCCAGGGAAGCCTGGTGTCTGCGGTCCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS CCA 72 bp AGGAAGCCCTGCACGGAGGTGATGAGCTCCTCGTTCTaGCAGGCCCGGTACAGGGCCCAGACATCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: RKPCTEVMSSSF*QARYRAQTSSR
Trigger: CCTGGAGGATGTCTGGGCCCTGTACCGGGCCTGCCAGAACGAGGAGCTCATCACCTCCGTGCAGGGCTTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CCA 72 bp GTGGCCGGGTCTCGGACTCCCGGGTGGGAGGGTGGCTaGCTGCAGATGCTTCCAGAGATCCACAAACAGGCT +
Preference number: 6 (lower is better)
Translates to: VAGSRTPGWEGG*LQMLPEIHKQA
Trigger: AGCCTGTTTGTGGATCTCTGGAAGCATCTGCAGCCAGCCACCCTCCCACCCGGGAGTCCGAGACCCGGCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 72 bp AGAGAGTGGCTTTCGGCCCGCCGCGTCTCCAAGGTGTaGTCCATCAGGGACACGGGGTTCCAGAGGGCCGTG +
Preference number: 6 (lower is better)
Translates to: REWLSARRVSKV*SIRDTGFQRAV
Trigger: CACGGCCCTCTGGAACCCCGTGTCCCTGATGGACAACACCTTGGAGACGCGGCGGGCCGAAAGCCACTCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CAA 90 bp ACAGCGCCAGTCTCGGTGAAGGCGTCTGCCGCTTGCTCTGAATTGTaGGGGGCGACGGGCTTCTCTCTCGCAGCATCCTCCGCCGCTTCC +
Preference number: 6 (lower is better)
Translates to: TAPVSVKASAACSEL*GATGFSLAASSAAS
Trigger: GGAAGCGGCGGAGGATGCTGCGAGAGAGAAGCCCGTCGCCCCCAACAATTCAGAGCAAGCGGCAGACGCCTTCACCGAGACTGGCGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
CDS TCA 72 bp AGCGCCAGTCTCGGTGAAGGCGTCTGCCGCTTGCTCTaGATTGTTGGGGGCGACGGGCTTCTCTCTCGCAGC +
Preference number: 6 (lower is better)
Translates to: SASLGEGVCRLL*IVGGDGLLSRS
Trigger: GCTGCGAGAGAGAAGCCCGTCGCCCCCAACAATTCAGAGCAAGCGGCAGACGCCTTCACCGAGACTGGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
CDS TCA 72 bp GCACGTTGGCCAGCTCGAAGCTCTGCCACTGCTGCGTaGGGGAGGAGAAGCAGCTGGCGCACACCAAGGTAC +
Preference number: 6 (lower is better)
Translates to: ARWPARSSATAA*GRRSSWRTPRY
Trigger: GTACCTTGGTGTGCGCCAGCTGCTTCTCCTCCCTCACGCAGCAGTGGCAGAGCTTCGAGCTGGCCAACGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS GCA 72 bp ACTGGCACGTTGGCCAGCTCGAAGCTCTGCCACTGCTaGGTGAGGGAGGAGAAGCAGCTGGCGCACACCAAG +
Preference number: 6 (lower is better)
Translates to: TGTLASSKLCHC*VREEKQLAHTK
Trigger: CTTGGTGTGCGCCAGCTGCTTCTCCTCCCTCACGCAGCAGTGGCAGAGCTTCGAGCTGGCCAACGTGCCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS GCA 72 bp CCGGGTCTCGGACTCCCGGGTGGGAGGGTGGCTGGCTaGAGATGCTTCCAGAGATCCACAAACAGGCTTCGT +
Preference number: 6 (lower is better)
Translates to: PGLGLPGGRVAG*RCFQRSTNRLR
Trigger: ACGAAGCCTGTTTGTGGATCTCTGGAAGCATCTGCAGCCAGCCACCCTCCCACCCGGGAGTCCGAGACCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 72 bp CATGCCGTCTGCAGGGGCCTCTTGGACAAGAGGGCCTaGCCAGGGATCCTGAATGCTCCTCAGGACGCTGGC +
Preference number: 6 (lower is better)
Translates to: HAVCRGLLDKRA*PGILNAPQDAG
Trigger: GCCAGCGTCCTGAGGAGCATTCAGGATCCCTGGCAAGGCCCTCTTGTCCAAGAGGCCCCTGCAGACGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 90 bp AGGGCTGTGGCAGCACTGCTGCTAGGCAGAGAGAAGATGCCATGGTaGGAGATGAGGCTGGGCACCGTGTGGTGTGGGGTGGGCACCGGA +
Preference number: 6 (lower is better)
Translates to: RAVAALLLGREKMPW*EMRLGTVWCGVGTG
Trigger: TCCGGTGCCCACCCCACACCACACGGTGCCCAGCCTCATCTCCAACCATGGCATCTTCTCTCTGCCTAGCAGCAGTGCTGCCACAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CAA 90 bp GCTCCTGGGGCCGGACCTGTTCCAGCTTCCCAGGCTCCGCGGCCTTaGGGATGTCAGACAAGGAAGCAGCAACACCAACCGGCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: APGAGPVPASQAPRP*GCQTRKQQHQPASP
Trigger: TGGAGAAGCCGGTTGGTGTTGCTGCTTCCTTGTCTGACATCCCAAAGGCCGCGGAGCCTGGGAAGCTGGAACAGGTCCGGCCCCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS CAA 90 bp GGCTCTGCCAGAGGGAGGCCCTTTCATGCCGTCTGCAGGGGCCTCTaGGACAAGAGGGCCTTGCCAGGGATCCTGAATGCTCCTCAGGAC +
Preference number: 6 (lower is better)
Translates to: GSARGRPFHAVCRGL*DKRALPGILNAPQD
Trigger: GTCCTGAGGAGCATTCAGGATCCCTGGCAAGGCCCTCTTGTCCAAGAGGCCCCTGCAGACGGCATGAAAGGGCCTCCCTCTGGCAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 90 bp CGGCTGTCCTGGAGAGCCCGGGGGACACGGCCACTGTTCTTCTCTTaGGGGTTGCAGACGCCTGGGAAAGGCTGTTCCTTGTGGTCCTCT +
Preference number: 6 (lower is better)
Translates to: RLSWRARGTRPLFFS*GLQTPGKGCSLWSS
Trigger: AGAGGACCACAAGGAACAGCCTTTCCCAGGCGTCTGCAACCCCAAAGAGAAGAACAGTGGCCGTGTCCCCCGGGCTCTCCAGGACAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS TCA 72 bp CCAAAGACAGCTGTCCGTGCGGTGACGACGCCTCTGTaGATCACTGTGCCCACGGACCTCGGTGGTGACGTG +
Preference number: 6 (lower is better)
Translates to: PKTAVRAVTTPL*ITVPTDLGGDV
Trigger: CACGTCACCACCGAGGTCCGTGGGCACAGTGATTCACAGAGGCGTCGTCACCGCACGGACAGCTGTCTTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495192.1
CDS GCA 72 bp ATCTGTCCAGTGGACATGCCCGCAGGGCCTCATGTGTaGAGAGCACCTATCAGGCCAGGCCTGCTGGCACCT +
Preference number: 6 (lower is better)
Translates to: ICPVDMPAGPHV*RAPIRPGLLAP
Trigger: AGGTGCCAGCAGGCCTGGCCTGATAGGTGCTCTGCACACATGAGGCCCTGCGGGCATGTCCACTGGACAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS GCA 72 bp AGGACTTCGGAGGAACCTAGCAACAGTGGGGTGGACTaGAGGGTGTGGACGCTAGGAACGAGAGCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: RTSEEPSNSGVD*RVWTLGTRAQP
Trigger: GGGCTGGGCTCTCGTTCCTAGCGTCCACACCCTGCAGTCCACCCCACTGTTGCTAGGTTCCTCCGAAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469381.1
ENST00000479488.1
CDS GCA 72 bp GGTTGGTGGCCGGAGAGGACACGGGGGACGACTCGCTaGTCAGTGAGGACCCTGGTAAGTAATACAGAGGCG +
Preference number: 6 (lower is better)
Translates to: GWWPERTRGTTR*SVRTLVSNTEA
Trigger: CGCCTCTGTATTACTTACCAGGGTCCTCACTGAGCAGCGAGTCGTCCCCCGTGTCCTCTCCGGCCACCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635906.1
CDS CCA 72 bp TGGTCGCGGTGGAAAGCATCCCTAGCGAAGGGGACTTaGGCTCATGGCTCATGCCTTTCATGCCAGGGCCCC +
Preference number: 6 (lower is better)
Translates to: WSRWKASLAKGT*AHGSCLSCQGP
Trigger: GGGGCCCTGGCATGAAAGGCATGAGCCATGAGCCCAAGTCCCCTTCGCTAGGGATGCTTTCCACCGCGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS CCA 72 bp AAGGGCTCCCACGGCTTGCTCTTCCCATTGGTGCTGTaGGACAGCGGCACAGGAATGTCCTTGGGTGCAGCG +
Preference number: 6 (lower is better)
Translates to: KGSHGLLFPLVL*DSGTGMSLGAA
Trigger: CGCTGCACCCAAGGACATTCCTGTGCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGCCGTGGGAGCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS CAA 72 bp CTGGTCGCGGTGGAAAGCATCCCTAGCGAAGGGGACTaGGGCTCATGGCTCATGCCTTTCATGCCAGGGCCC +
Preference number: 6 (lower is better)
Translates to: LVAVESIPSEGD*GSWLMPFMPGP
Trigger: GGGCCCTGGCATGAAAGGCATGAGCCATGAGCCCAAGTCCCCTTCGCTAGGGATGCTTTCCACCGCGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253458.12
CDS CAA 72 bp GTCTCGGTGAAGGCGTCTGCCGCTTGCTCTGAATTGTaGGGGGCGACGGGCTTCTCTCTCGCAGCATCCTCC +
Preference number: 6 (lower is better)
Translates to: VSVKASAACSEL*GATGFSLAASS
Trigger: GGAGGATGCTGCGAGAGAGAAGCCCGTCGCCCCCAACAATTCAGAGCAAGCGGCAGACGCCTTCACCGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
CDS CAA 72 bp CCAGTCTCGGTGAAGGCGTCTGCCGCTTGCTCTGAATaGTTGGGGGCGACGGGCTTCTCTCTCGCAGCATCC +
Preference number: 6 (lower is better)
Translates to: PVSVKASAACSE*LGATGFSLAAS
Trigger: GGATGCTGCGAGAGAGAAGCCCGTCGCCCCCAACAATTCAGAGCAAGCGGCAGACGCCTTCACCGAGACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
CDS CAA 72 bp GCCGGACCTGTTCCAGCTTCCCAGGCTCCGCGGCCTTaGGGATGTCAGACAAGGAAGCAGCAACACCAACCG +
Preference number: 6 (lower is better)
Translates to: AGPVPASQAPRP*GCQTRKQQHQP
Trigger: CGGTTGGTGTTGCTGCTTCCTTGTCTGACATCCCAAAGGCCGCGGAGCCTGGGAAGCTGGAACAGGTCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS CAA 72 bp TCAGCTGCTGTCCGTCATCCACCAACAGGCTGTGGCTaGCTCGCAGGGTGTATAGGAACAGGGGCAGCCGGG +
Preference number: 6 (lower is better)
Translates to: SAAVRHPPTGCG*LAGCIGTGAAG
Trigger: CCCGGCTGCCCCTGTTCCTATACACCCTGCGAGCAAGCCACAGCCTGTTGGTGGATGACGGACAGCAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574293.1
ENST00000637419.1
CDS CAA 72 bp GCCCGGGGGACACGGCCACTGTTCTTCTCTTTGGGGTaGCAGACGCCTGGGAAAGGCTGTTCCTTGTGGTCC +
Preference number: 6 (lower is better)
Translates to: ARGTRPLFFSLG*QTPGKGCSLWS
Trigger: GGACCACAAGGAACAGCCTTTCCCAGGCGTCTGCAACCCCAAAGAGAAGAACAGTGGCCGTGTCCCCCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 72 bp TACAGGGCCCAGACATCCTCCAGGACGCTGAAGCACTaGGGGCAGCTGCGGACTTCACAGCGCTTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: YRAQTSSRTLKH*GQLRTSQRLLG
Trigger: CCCCAACAAGCGCTGTGAAGTCCGCAGCTGCCCCAAGTGCTTCAGCGTCCTGGAGGATGTCTGGGCCCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS TCA 72 bp GCAAAAACTCTAGCTTCTCAGAGGACGTGTCCAGTTTaGGGGGCGGCTGCTCGGCCACGCAACGGAGGTGGG +
Preference number: 6 (lower is better)
Translates to: AKTLASQRTCPV*GAAARPRNGGG
Trigger: CCCACCTCCGTTGCGTGGCCGAGCAGCCGCCCCTCAAACTGGACACGTCCTCTGAGAAGCTAGAGTTTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS TCA 72 bp ATCAGGGCTGTAGCGGGTAGACAGCGCCAGTCTCGGTaGAGGCGTCTGCCGCTTGCTCTGAATTGTTGGGGG +
Preference number: 6 (lower is better)
Translates to: IRAVAGRQRQSR*RRLPLALNCWG
Trigger: CCCCCAACAATTCAGAGCAAGCGGCAGACGCCTTCACCGAGACTGGCGCTGTCTACCCGCTACAGCCCTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
CDS TCA 72 bp GTCCTAGACGTGCTCCAAAGACAGCTGTCCGTGCGGTaGCGACGCCTCTGTGAATCACTGTGCCCACGGACC +
Preference number: 6 (lower is better)
Translates to: VLDVLQRQLSVR*RRLCESLCPRT
Trigger: GGTCCGTGGGCACAGTGATTCACAGAGGCGTCGTCACCGCACGGACAGCTGTCTTTGGAGCACGTCTAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495192.1
CDS GCA 72 bp ACACCAACCGGCTTCTCCACATCCAGAGAGGCTTGCTaGGTGGCTGGTTCACTCAGGGAGACGGCAGGACTG +
Preference number: 6 (lower is better)
Translates to: TPTGFSTSREAC*VAGSLRETAGL
Trigger: CAGTCCTGCCGTCTCCCTGAGTGAACCAGCCACGCAGCAAGCCTCTCTGGATGTGGAGAAGCCGGTTGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000438180.1
ENST00000562659.1
CDS GCA 72 bp GCAACACCAACCGGCTTCTCCACATCCAGAGAGGCTTaGTGCGTGGCTGGTTCACTCAGGGAGACGGCAGGA +
Preference number: 6 (lower is better)
Translates to: ATPTGFSTSREA*CVAGSLRETAG
Trigger: TCCTGCCGTCTCCCTGAGTGAACCAGCCACGCAGCAAGCCTCTCTGGATGTGGAGAAGCCGGTTGGTGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000438180.1
ENST00000562659.1
CDS GCA 72 bp CCACAAAGGGCTCCCACGGCTTGCTCTTCCCATTGGTaGTGTGGGACAGCGGCACAGGAATGTCCTTGGGTG +
Preference number: 6 (lower is better)
Translates to: PQRAPTACSSHW*CGTAAQECPWV
Trigger: CACCCAAGGACATTCCTGTGCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGCCGTGGGAGCCCTTTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS GCA 72 bp ACACCCTGCCCAGCAGAGCCCAAAACCTCTCTCCAGTaGAGCCAGCGAAGGCCTCTCCTGTGGACCACAATG +
Preference number: 6 (lower is better)
Translates to: TPCPAEPKTSLQ*SQRRPLLWTTM
Trigger: CATTGTGGTCCACAGGAGAGGCCTTCGCTGGCTGCACTGGAGAGAGGTTTTGGGCTCTGCTGGGCAGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496345.1
CDS CCA 72 bp CTGCCACAAAGGGCTCCCACGGCTTGCTCTTCCCATTaGTGCTGTGGGACAGCGGCACAGGAATGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: LPQRAPTACSSH*CCGTAAQECPW
Trigger: CCAAGGACATTCCTGTGCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGCCGTGGGAGCCCTTTGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS CCA 72 bp ACAGGGCTGCTTGTGCACATGCACTCCCCCATGCTGTaGCCATCTGAGTCCATCTCCTGGGAGGAGACAGGC +
Preference number: 6 (lower is better)
Translates to: TGLLVHMHSPML*PSESISWEETG
Trigger: GCCTGTCTCCTCCCAGGAGATGGACTCAGATGGCCACAGCATGGGGGAGTGCATGTGCACAAGCAGCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS CCA 72 bp GGAGAGCCCGGGGGACACGGCCACTGTTCTTCTCTTTaGGGTTGCAGACGCCTGGGAAAGGCTGTTCCTTGT +
Preference number: 6 (lower is better)
Translates to: GEPGGHGHCSSL*GCRRLGKAVPC
Trigger: ACAAGGAACAGCCTTTCCCAGGCGTCTGCAACCCCAAAGAGAAGAACAGTGGCCGTGTCCCCCGGGCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 72 bp CACTCAGGGAGACGGCAGGACTGTCCCTCGGAGAGTTaGTCAAGGAGTCGGCCACTGCTGCTGACAGTGCCT +
Preference number: 6 (lower is better)
Translates to: HSGRRQDCPSES*SRSRPLLLTVP
Trigger: AGGCACTGTCAGCAGCAGTGGCCGACTCCTTGACAAACTCTCCGAGGGACAGTCCTGCCGTCTCCCTGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000438180.1
ENST00000495192.1
ENST00000562659.1
CDS CAA 72 bp AGCAACACCAACCGGCTTCTCCACATCCAGAGAGGCTaGCTGCGTGGCTGGTTCACTCAGGGAGACGGCAGG +
Preference number: 6 (lower is better)
Translates to: SNTNRLLHIQRG*LRGWFTQGDGR
Trigger: CCTGCCGTCTCCCTGAGTGAACCAGCCACGCAGCAAGCCTCTCTGGATGTGGAGAAGCCGGTTGGTGTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000438180.1
ENST00000562659.1
CDS CAA 72 bp AGAGGGAGGCCCTTTCATGCCGTCTGCAGGGGCCTCTaGGACAAGAGGGCCTTGCCAGGGATCCTGAATGCT +
Preference number: 6 (lower is better)
Translates to: RGRPFHAVCRGL*DKRALPGILNA
Trigger: AGCATTCAGGATCCCTGGCAAGGCCCTCTTGTCCAAGAGGCCCCTGCAGACGGCATGAAAGGGCCTCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 72 bp TGGAGAGCCCGGGGGACACGGCCACTGTTCTTCTCTTaGGGGTTGCAGACGCCTGGGAAAGGCTGTTCCTTG +
Preference number: 6 (lower is better)
Translates to: WRARGTRPLFFS*GLQTPGKGCSL
Trigger: CAAGGAACAGCCTTTCCCAGGCGTCTGCAACCCCAAAGAGAAGAACAGTGGCCGTGTCCCCCGGGCTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 90 bp GCAAACTCTTCTGCCACAAAGGGCTCCCACGGCTTGCTCTTCCCATaGGTGCTGTGGGACAGCGGCACAGGAATGTCCTTGGGTGCAGCG +
Preference number: 6 (lower is better)
Translates to: ANSSATKGSHGLLFP*VLWDSGTGMSLGAA
Trigger: CGCTGCACCCAAGGACATTCCTGTGCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGCCGTGGGAGCCCTTTGTGGCAGAAGAGTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS TCA 72 bp GCTTGTGCACATGCACTCCCCCATGCTGTGGCCATCTaGGTCCATCTCCTGGGAGGAGACAGGCACACACAG +
Preference number: 6 (lower is better)
Translates to: ACAHALPHAVAI*VHLLGGDRHTQ
Trigger: CTGTGTGTGCCTGTCTCCTCCCAGGAGATGGACTCAGATGGCCACAGCATGGGGGAGTGCATGTGCACAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS TCA 72 bp CACACACCAGGGTCCCACACTCCACGCAAGCACCGATaGTCAGCTGCTGTCCGTCATCCACCAACAGGCTGT +
Preference number: 6 (lower is better)
Translates to: HTPGSHTPRKHR*SAAVRHPPTGC
Trigger: ACAGCCTGTTGGTGGATGACGGACAGCAGCTGATCATCGGTGCTTGCGTGGAGTGTGGGACCCTGGTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574293.1
ENST00000637419.1
CDS GCA 72 bp GGTGCTGTGGGACAGCGGCACAGGAATGTCCTTGGGTaGAGCGCCCCGGATATAGTGAAGCATGCTCAGACT +
Preference number: 6 (lower is better)
Translates to: GAVGQRHRNVLG*SAPDIVKHAQT
Trigger: AGTCTGAGCATGCTTCACTATATCCGGGGCGCTGCACCCAAGGACATTCCTGTGCCGCTGTCCCACAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS GCA 72 bp GTGCAAACTCTTCTGCCACAAAGGGCTCCCACGGCTTaGTCTTCCCATTGGTGCTGTGGGACAGCGGCACAG +
Preference number: 6 (lower is better)
Translates to: VQTLLPQRAPTA*SSHWCCGTAAQ
Trigger: CTGTGCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGCCGTGGGAGCCCTTTGTGGCAGAAGAGTTTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS GCA 72 bp GCAACACAGGGCTGCTTGTGCACATGCACTCCCCCATaGTGTGGCCATCTGAGTCCATCTCCTGGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: ATQGCLCTCTPP*CGHLSPSPGRR
Trigger: TCTCCTCCCAGGAGATGGACTCAGATGGCCACAGCATGGGGGAGTGCATGTGCACAAGCAGCCCTGTGTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS GCA 72 bp AGGGTCCCACACTCCACGCAAGCACCGATGATCAGCTaGTGTCCGTCATCCACCAACAGGCTGTGGCTTGCT +
Preference number: 6 (lower is better)
Translates to: RVPHSTQAPMIS*CPSSTNRLWLA
Trigger: AGCAAGCCACAGCCTGTTGGTGGATGACGGACAGCAGCTGATCATCGGTGCTTGCGTGGAGTGTGGGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574293.1
ENST00000637419.1
CDS CAA 72 bp CTGGTCGCGGTGGAAAGCATCCCTAGCGAAGGGGACTaGGGCTCATGGCTCATGCCTGCACCAGTAAGGTCT +
Preference number: 6 (lower is better)
Translates to: LVAVESIPSEGD*GSWLMPAPVRS
Trigger: AGACCTTACTGGTGCAGGCATGAGCCATGAGCCCAAGTCCCCTTCGCTAGGGATGCTTTCCACCGCGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 90 bp TGGCTGGTTCACTCAGGGAGACGGCAGGACTGTCCCTCGGAGAGTTaGTCAAGGAGTCGGCCACTGCTGCTGACAGTGCCTTCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: WLVHSGRRQDCPSES*SRSRPLLLTVPSAS
Trigger: TGAAGCAGAAGGCACTGTCAGCAGCAGTGGCCGACTCCTTGACAAACTCTCCGAGGGACAGTCCTGCCGTCTCCCTGAGTGAACCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000438180.1
ENST00000495192.1
ENST00000562659.1
CDS CAA 90 bp CCTGGGAAAGGCTGTTCCTTGTGGTCCTCTTCCCCACTGGTGATGTaGATGTCACTGTCCTCGGAGGTGCAGAAGCCCCGTAGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: PGKGCSLWSSSPLVM*MSLSSEVQKPRRVS
Trigger: GGAGACCCTACGGGGCTTCTGCACCTCCGAGGACAGTGACATCAACATCACCAGTGGGGAAGAGGACCACAAGGAACAGCCTTTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS GCA 72 bp GCAACACCAACCGGCTTCTCCACATCCAGAGAGGCTTaGTGCGTGGCTGGTTCTTTCCTCTTCTCAGCGCTG +
Preference number: 6 (lower is better)
Translates to: ATPTGFSTSREA*CVAGSFLFSAL
Trigger: CAGCGCTGAGAAGAGGAAAGAACCAGCCACGCAGCAAGCCTCTCTGGATGTGGAGAAGCCGGTTGGTGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412692.5
ENST00000469381.1
CDS GCA 72 bp GAGGTGGAAACCAACATTAACCCAGTCCTGGGGCTTTaGAGGACCGCAGACACCAGGCTTCCCTGGGATCCA +
Preference number: 6 (lower is better)
Translates to: EVETNINPVLGL*RTADTRLPWDP
Trigger: TGGATCCCAGGGAAGCCTGGTGTCTGCGGTCCTGCAAAGCCCCAGGACTGGGTTAATGTTGGTTTCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS CCA 72 bp CATTGGTGCTGTGGGACAGCGGCACAGGAATGTCCTTaGGTGCAGCGCCCCGGATATAGTGAAGCATGCTCA +
Preference number: 6 (lower is better)
Translates to: HWCCGTAAQECP*VQRPGYSEACS
Trigger: TGAGCATGCTTCACTATATCCGGGGCGCTGCACCCAAGGACATTCCTGTGCCGCTGTCCCACAGCACCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS CCA 72 bp ATGATCAGCTGCTGTCCGTCATCCACCAACAGGCTGTaGCTTGCTCGCAGGGTGTATAGGAACAGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: MISCCPSSTNRL*LARRVYRNRGS
Trigger: GCTGCCCCTGTTCCTATACACCCTGCGAGCAAGCCACAGCCTGTTGGTGGATGACGGACAGCAGCTGATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574293.1
ENST00000637419.1
CDS CCA 72 bp CGACCAGCGCCCAGGCAATTTCGGCCACCTTGGCCCTaGCAGATCCACAATGAGGTAATTGACGACCAAGGA +
Preference number: 6 (lower is better)
Translates to: RPAPRQFRPPWP*QIHNEVIDDQG
Trigger: TCCTTGGTCGTCAATTACCTCATTGTGGATCTGCCAGGGCCAAGGTGGCCGAAATTGCCTGGGCGCTGGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635906.1
CDS CCA 72 bp TCTCTCCGACCAGCGCCCAGGCAATTTCGGCCACCTTaGCCCTGGCAGATCCACAATGAGGTAATTGACGAC +
Preference number: 6 (lower is better)
Translates to: SLRPAPRQFRPP*PWQIHNEVIDD
Trigger: GTCGTCAATTACCTCATTGTGGATCTGCCAGGGCCAAGGTGGCCGAAATTGCCTGGGCGCTGGTCGGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635906.1
CDS TCA 72 bp CCTCGGAGAGTTTGTCAAGGAGTCGGCCACTGCTGCTaGCAGTGCCTTCTGCTTCATGGCACGGAGCATTTC +
Preference number: 6 (lower is better)
Translates to: PRRVCQGVGHCC*QCLLLHGTEHF
Trigger: GAAATGCTCCGTGCCATGAAGCAGAAGGCACTGTCAGCAGCAGTGGCCGACTCCTTGACAAACTCTCCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000438180.1
ENST00000495192.1
ENST00000562659.1
CDS TCA 72 bp GCCTTCTGGGTGGACTGCAGCACTGACTCGTGGAACTaGTGTGCAAACTCTTCTGCCACAAAGGGCTCCCAC +
Preference number: 6 (lower is better)
Translates to: AFWVDCSTDSWN*CANSSATKGSH
Trigger: GTGGGAGCCCTTTGTGGCAGAAGAGTTTGCACATCAGTTCCACGAGTCAGTGCTGCAGTCCACCCAGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
ENST00000562659.1
CDS GCA 72 bp CAGCCAGACAAAGAGCCTTCATCTGTCCAGTGGACATaGCCGCAGGGCCTCATGTGTGCAGAGCACCTATCA +
Preference number: 6 (lower is better)
Translates to: QPDKEPSSVQWT*PQGLMCAEHLS
Trigger: TGATAGGTGCTCTGCACACATGAGGCCCTGCGGGCATGTCCACTGGACAGATGAAGGCTCTTTGTCTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS CCA 72 bp ACAGAGAACAATAGCAGAGCCCCTGCCCAGGGGCGCTaGGGTATCTCCCTCCTCCTTTACAAAGTGAGTAGG +
Preference number: 6 (lower is better)
Translates to: TENNSRAPAQGR*GISLLLYKVSR
Trigger: CCTACTCACTTTGTAAAGGAGGAGGGAGATACCCCAGCGCCCCTGGGCAGGGGCTCTGCTATTGTTCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS CCA 72 bp ATCGATGCGTCCCTGCTCACAGCACAGCGTCAGCGCTaGTGCCTACAAACGTTTCTCACCTACGAGTTCAGG +
Preference number: 6 (lower is better)
Translates to: IDASLLTAQRQR*CLQTFLTYEFR
Trigger: CCTGAACTCGTAGGTGAGAAACGTTTGTAGGCACCAGCGCTGACGCTGTGCTGTGAGCAGGGACGCATCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562659.1
CDS CCA 72 bp ACGGCCACTGTTCTTCTCTTTGGGGTTGCAGACGCCTaGGAAAGGCTGTTCCTTGTGGTCCTCTTCCCCACT +
Preference number: 6 (lower is better)
Translates to: TATVLLFGVADA*ERLFLVVLFPT
Trigger: AGTGGGGAAGAGGACCACAAGGAACAGCCTTTCCCAGGCGTCTGCAACCCCAAAGAGAAGAACAGTGGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 72 bp AGCAACACCAACCGGCTTCTCCACATCCAGAGAGGCTaGCTGCGTGGCTGGTTCTTTCCTCTTCTCAGCGCT +
Preference number: 6 (lower is better)
Translates to: SNTNRLLHIQRG*LRGWFFPLLSA
Trigger: AGCGCTGAGAAGAGGAAAGAACCAGCCACGCAGCAAGCCTCTCTGGATGTGGAGAAGCCGGTTGGTGTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412692.5
ENST00000469381.1
CDS GCA 72 bp GTAGTGGACGGACGTGTCAACCTTGTGGTTCTGCTCTaGAGACAGCACAGCCACGCTCCCTTTATGCTTCTG +
Preference number: 6 (lower is better)
Translates to: VVDGRVNLVVLL*RQHSHAPFMLL
Trigger: CAGAAGCATAAAGGGAGCGTGGCTGTGCTGTCTGCAGAGCAGAACCACAAGGTTGACACGTCCGTCCACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
CDS GCA 72 bp GATGCGTCCCTGCTCACAGCACAGCGTCAGCGCTGGTaGCTACAAACGTTTCTCACCTACGAGTTCAGGTTT +
Preference number: 6 (lower is better)
Translates to: DASLLTAQRQRW*LQTFLTYEFRF
Trigger: AAACCTGAACTCGTAGGTGAGAAACGTTTGTAGGCACCAGCGCTGACGCTGTGCTGTGAGCAGGGACGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562659.1
CDS CCA 72 bp TTGGGGTTGCAGACGCCTGGGAAAGGCTGTTCCTTGTaGTCCTCTTCCCCACTGGTGATGTTGATGTCACTG +
Preference number: 6 (lower is better)
Translates to: LGLQTPGKGCSL*SSSPLVMLMSL
Trigger: CAGTGACATCAACATCACCAGTGGGGAAGAGGACCACAAGGAACAGCCTTTCCCAGGCGTCTGCAACCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS CAA 90 bp CTGTTCTTCTCTTTGGGGTTGCAGACGCCTGGGAAAGGCTGTTCCTaGTGGTCCTCTTCCCCACTGGTGATGTTGATGTCACTGTCCTCG +
Preference number: 6 (lower is better)
Translates to: LFFSLGLQTPGKGCS*WSSSPLVMLMSLSS
Trigger: CGAGGACAGTGACATCAACATCACCAGTGGGGAAGAGGACCACAAGGAACAGCCTTTCCCAGGCGTCTGCAACCCCAAAGAGAAGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637419.1
CDS TCA 72 bp TTTGGAGAGAAGGACAGCGGGATTCTAGCCGAGCCTTaGGGGGCAGGCAAAGCACTAAAGCCCGAAAAACCA +
Preference number: 6 (lower is better)
Translates to: FGEKDSGILAEP*GAGKALKPEKP
Trigger: TGGTTTTTCGGGCTTTAGTGCTTTGCCTGCCCCTCAAGGCTCGGCTAGAATCCCGCTGTCCTTCTCTCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495192.1
CDS TCA 72 bp CAGCAACTTTGGTCAGCCTCAACCACAGCCGAGAGCTaGGCAGGGACTGGCAGCCTCATTACCTTTATGCTT +
Preference number: 6 (lower is better)
Translates to: QQLWSASTTAES*AGTGSLITFML
Trigger: AAGCATAAAGGTAATGAGGCTGCCAGTCCCTGCTCAGCTCTCGGCTGTGGTTGAGGCTGACCAAAGTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562659.1
CDS TCA 72 bp GGAGTTTATAAAAACTTGTGCCCACGGCTGAACGGCTaGGCAGCTGTGGCGCTCAGCAACTTTGGTCAGCCT +
Preference number: 6 (lower is better)
Translates to: GVYKNLCPRLNG*AAVALSNFGQP
Trigger: AGGCTGACCAAAGTTGCTGAGCGCCACAGCTGCTCAGCCGTTCAGCCGTGGGCACAAGTTTTTATAAACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562659.1
CDS GCA 72 bp GTCAAGGAGTCGGCCACTGCTGCTGACAGTGCCTTCTaGTTCATGGCACGGAGCATTTCAACAAGTCTCTCT +
Preference number: 6 (lower is better)
Translates to: VKESATAADSAF*FMARSISTSLS
Trigger: AGAGAGACTTGTTGAAATGCTCCGTGCCATGAAGCAGAAGGCACTGTCAGCAGCAGTGGCCGACTCCTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000438180.1
ENST00000495192.1
CDS CAA 72 bp GTGTTCCTGGTAAGCTTCAAAAACGGCCTCGATCCCTaGCCACTTGCGCTTGGGGACTTCCTCCTCATCTTC +
Preference number: 6 (lower is better)
Translates to: VFLVSFKNGLDP*PLALGDFLLIF
Trigger: GAAGATGAGGAGGAAGTCCCCAAGCGCAAGTGGCAAGGGATCGAGGCCGTTTTTGAAGCTTACCAGGAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
CDS CAA 90 bp GCAGGCCCAGTTGAAAGGAAGCAACCATCTCAAAGCGAGCCCAGATaGCTCTCGGCATCCACTACACAATGTCCTAGACGTGCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: AGPVERKQPSQSEPR*LSASTTQCPRRAPK
Trigger: CTTTGGAGCACGTCTAGGACATTGTGTAGTGGATGCCGAGAGCAATCTGGGCTCGCTTTGAGATGGTTGCTTCCTTTCAACTGGGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495192.1
CDS TCA 72 bp GCCTCTGTGAATCACTGTGCCCACGGACCTCGGTGGTaGCGTGCGAGGATGTATTCTTATTTCAAGTCAGAC +
Preference number: 6 (lower is better)
Translates to: ASVNHCAHGPRW*RARMYSYFKSD
Trigger: GTCTGACTTGAAATAAGAATACATCCTCGCACGTCACCACCGAGGTCCGTGGGCACAGTGATTCACAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495192.1
CDS GCA 72 bp CGCTTCCTCCGCTTCTGGGCCACCAATTCCTCCTTCTaGTGTTGGGTGGTCAAGCCAAAAAGTTGCAAAAAC +
Preference number: 6 (lower is better)
Translates to: RFLRFWATNSSF*CWVVKPKSCKN
Trigger: GTTTTTGCAACTTTTTGGCTTGACCACCCAACAGCAGAAGGAGGAATTGGTGGCCCAGAAGCGGAGGAAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000469381.1
CDS CCA 72 bp CTGAACACCCTGAAGGCCAGTTCCTTTCAACCGAGGTaGAAACCAACATTAACCCAGTCCTGGGGCTTTGCA +
Preference number: 6 (lower is better)
Translates to: LNTLKASSFQPR*KPTLTQSWGFA
Trigger: TGCAAAGCCCCAGGACTGGGTTAATGTTGGTTTCCACCTCGGTTGAAAGGAACTGGCCTTCAGGGTGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS CCA 72 bp TGGAGCCGCTCCCTTTCTGAGACCATCTTCTGTTTCTaGCTCCTCAACTCCTGTAATCCTAGCTACTCGGGA +
Preference number: 6 (lower is better)
Translates to: WSRSLSETIFCF*LLNSCNPSYSG
Trigger: TCCCGAGTAGCTAGGATTACAGGAGTTGAGGAGCCAGAAACAGAAGATGGTCTCAGAAAGGGAGCGGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471070.1
CDS CCA 72 bp CCTCATTACCTTTATGCTTCTGCAGGGCCTTCTGGGTaGACTGCAGCACTGACTCGTGGAACTGATGTGCAA +
Preference number: 6 (lower is better)
Translates to: PHYLYASAGPSG*TAALTRGTDVQ
Trigger: TTGCACATCAGTTCCACGAGTCAGTGCTGCAGTCCACCCAGAAGGCCCTGCAGAAGCATAAAGGTAATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562659.1
CDS CAA 90 bp CTCTTCTATGTGTTCCTGGTAAGCTTCAAAAACGGCCTCGATCCCTaGCCACTTGCGCTTGGGGACTTCCTCCTCATCTTCTCCATCTTC +
Preference number: 6 (lower is better)
Translates to: LFYVFLVSFKNGLDP*PLALGDFLLIFSIF
Trigger: GAAGATGGAGAAGATGAGGAGGAAGTCCCCAAGCGCAAGTGGCAAGGGATCGAGGCCGTTTTTGAAGCTTACCAGGAACACATAGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000438180.1
ENST00000469381.1
CDS GCA 72 bp TCTGAAAAGACAGGAGATGGTGATGTATTTTCCGTATaGAGGAGCCCGAAGGCCCGCTTTGTGCTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: SEKTGDGDVFSV*RSPKARFVLSS
Trigger: AGAGGAGAGCACAAAGCGGGCCTTCGGGCTCCTGCATACGGAAAATACATCACCATCTCCTGTCTTTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496345.1
CDS GCA 72 bp CGGGCCTCCAGTCGTCTACATTGTGTCTGTAACACCTaGCGCTCCAGATTTTGCTCTGAAAAGACAGGAGAT +
Preference number: 6 (lower is better)
Translates to: RASSRLHCVCNT*RSRFCSEKTGD
Trigger: ATCTCCTGTCTTTTCAGAGCAAAATCTGGAGCGGCAGGTGTTACAGACACAATGTAGACGACTGGAGGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496345.1
CDS GCA 72 bp GTGCCAAGACAAAGATGCTGCCAGAGATGGAGGAGCTaGATCATAGTGGAAACAGCGCCGATTCATCTTCGT +
Preference number: 6 (lower is better)
Translates to: VPRQRCCQRWRS*IIVETAPIHLR
Trigger: ACGAAGATGAATCGGCGCTGTTTCCACTATGATGCAGCTCCTCCATCTCTGGCAGCATCTTTGTCTTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574293.1
CDS CCA 72 bp CTCCGCTTCTGGGCCACCAATTCCTCCTTCTGCTGTTaGGTGGTCAAGCCAAAAAGTTGCAAAAACTCTAGC +
Preference number: 6 (lower is better)
Translates to: LRFWATNSSFCC*VVKPKSCKNSS
Trigger: GCTAGAGTTTTTGCAACTTTTTGGCTTGACCACCCAACAGCAGAAGGAGGAATTGGTGGCCCAGAAGCGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000469381.1
CDS GCA 72 bp TGTGAATCACTGTGCCCACGGACCTCGGTGGTGACGTaGGAGGATGTATTCTTATTTCAAGTCAGACAAGGT +
Preference number: 6 (lower is better)
Translates to: CESLCPRTSVVT*EDVFLFQVRQG
Trigger: ACCTTGTCTGACTTGAAATAAGAATACATCCTCGCACGTCACCACCGAGGTCCGTGGGCACAGTGATTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495192.1
CDS GCA 72 bp TTGAAAGGAAGCAACCATCTCAAAGCGAGCCCAGATTaGTCTCGGCATCCACTACACAATGTCCTAGACGTG +
Preference number: 6 (lower is better)
Translates to: LKGSNHLKASPD*SRHPLHNVLDV
Trigger: CACGTCTAGGACATTGTGTAGTGGATGCCGAGAGCAATCTGGGCTCGCTTTGAGATGGTTGCTTCCTTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495192.1
CDS CAA 72 bp GGCATCTGCTGCTGTCTTGGCTCAAACTCGGAGTTCTaGGAACCCCCAGATGTAAAAACTTTGGGAGTGATC +
Preference number: 6 (lower is better)
Translates to: GICCCLGSNSEF*EPPDVKTLGVI
Trigger: GATCACTCCCAAAGTTTTTACATCTGGGGGTTCCAAGAACTCCGAGTTTGAGCCAAGACAGCAGCAGATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471070.1
CDS CAA 72 bp GTTGAAAGGAAGCAACCATCTCAAAGCGAGCCCAGATaGCTCTCGGCATCCACTACACAATGTCCTAGACGT +
Preference number: 6 (lower is better)
Translates to: VERKQPSQSEPR*LSASTTQCPRR
Trigger: ACGTCTAGGACATTGTGTAGTGGATGCCGAGAGCAATCTGGGCTCGCTTTGAGATGGTTGCTTCCTTTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495192.1
CDS GCA 72 bp TCCTCCTTCTGCTGTTGGGTGGTCAAGCCAAAAAGTTaGAAAAACTCTAGCTTCTCAGAGGACGTGTCCAGT +
Preference number: 6 (lower is better)
Translates to: SSFCCWVVKPKS*KNSSFSEDVSS
Trigger: ACTGGACACGTCCTCTGAGAAGCTAGAGTTTTTGCAACTTTTTGGCTTGACCACCCAACAGCAGAAGGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
CDS CCA 72 bp GCTTCTGGGCCACCAATTCCTCCTTCTGCTGTTGGGTaGTCAAGCCAAAAAGTTGCAAAAACTCTAGCTTCT +
Preference number: 6 (lower is better)
Translates to: ASGPPIPPSAVG*SSQKVAKTLAS
Trigger: AGAAGCTAGAGTTTTTGCAACTTTTTGGCTTGACCACCCAACAGCAGAAGGAGGAATTGGTGGCCCAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253458.12
ENST00000393243.5
ENST00000405402.6
ENST00000412692.5
ENST00000469381.1
CDS CCA 72 bp GTGCGAGGATGTATTCTTATTTCAAGTCAGACAAGGTaGCCCCAACACAAAGAAACACCCCAAAGACCCAGG +
Preference number: 6 (lower is better)
Translates to: VRGCILISSQTR*PQHKETPQRPR
Trigger: CCTGGGTCTTTGGGGTGTTTCTTTGTGTTGGGGCCACCTTGTCTGACTTGAAATAAGAATACATCCTCGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495192.1
CDS CAA 90 bp CGTAAGAGTCATCGAGGTCGTAGTAGTACCCTGATGGAGAAATGGTaGTATTCAGCCAGACAAAGAGCCTTCATCTGTCCAGTGGACATG +
Preference number: 6 (lower is better)
Translates to: RKSHRGRSSTLMEKW*YSARQRAFICPVDM
Trigger: CATGTCCACTGGACAGATGAAGGCTCTTTGTCTGGCTGAATACAACCATTTCTCCATCAGGGTACTACTACGACCTCGATGACTCTTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS TCA 72 bp CTCGTCGTAAGAGTCATCGAGGTCGTAGTAGTACCCTaGTGGAGAAATGGTTGTATTCAGCCAGACAAAGAG +
Preference number: 6 (lower is better)
Translates to: LVVRVIEVVVVP*WRNGCIQPDKE
Trigger: CTCTTTGTCTGGCTGAATACAACCATTTCTCCATCAGGGTACTACTACGACCTCGATGACTCTTACGACGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS CAA 72 bp CATCGAGGTCGTAGTAGTACCCTGATGGAGAAATGGTaGTATTCAGCCAGACAAAGAGCCTTCATCTGTCCA +
Preference number: 6 (lower is better)
Translates to: HRGRSSTLMEKW*YSARQRAFICP
Trigger: TGGACAGATGAAGGCTCTTTGTCTGGCTGAATACAACCATTTCTCCATCAGGGTACTACTACGACCTCGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469381.1
CDS GCA 72 bp ATAATTCAGATAAAAGAGGTGCCAAGACAAAGATGCTaGCAGAGATGGAGGAGCTGCATCATAGTGGAAACA +
Preference number: 6 (lower is better)
Translates to: IIQIKEVPRQRC*QRWRSCIIVET
Trigger: TGTTTCCACTATGATGCAGCTCCTCCATCTCTGGCAGCATCTTTGTCTTGGCACCTCTTTTATCTGAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574293.1
CDS CAA 90 bp CAATACACAGGAATAAAGACAAAGGATCCAGGACCTAAAGGCAATTaGATACAGATTAGGAAGAAATTTGATGGCCTTAAAATGCAGCTT +
Preference number: 6 (lower is better)
Translates to: QYTGIKTKDPGPKGN*IQIRKKFDGLKMQL
Trigger: AAGCTGCATTTTAAGGCCATCAAATTTCTTCCTAATCTGTATCAAATTGCCTTTAGGTCCTGGATCCTTTGTCTTTATTCCTGTGTATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496345.1
CDS CAA 72 bp GGAATAAAGACAAAGGATCCAGGACCTAAAGGCAATTaGATACAGATTAGGAAGAAATTTGATGGCCTTAAA +
Preference number: 6 (lower is better)
Translates to: GIKTKDPGPKGN*IQIRKKFDGLK
Trigger: TTTAAGGCCATCAAATTTCTTCCTAATCTGTATCAAATTGCCTTTAGGTCCTGGATCCTTTGTCTTTATTCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496345.1