RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GSDMB (Homo sapiens)

Ensembl gene IDs: ENSG00000073605

Ensembl transcript IDs: ENST00000309481.11, ENST00000360317.7, ENST00000394175.6, ENST00000394179.5, ENST00000418519.5, ENST00000418519.6, ENST00000464556.1, ENST00000468820.1, ENST00000477054.6, ENST00000479136.5, ENST00000486560.1, ENST00000519429.1, ENST00000520542.5, ENST00000522564.5, ENST00000523371.5, ENST00000524039.5

Found 434 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCCAGCAGGATAGAGACAACAACATACAGCGCACAGAGAATTCGTaGCTCAGGGTCATAGTCCATGTCAGGAGGACTGCTGGCCAGCTC +
Preference number: 1 (lower is better)
Translates to: LQQDRDNNIQRTENS*LRVIVHVRRTAGQL
Trigger: GAGCTGGCCAGCAGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTCTCTGTGCGCTGTATGTTGTTGTCTCTATCCTGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR TCA 90 bp CGAGGGAGTTTAGCACATCTTTTCTCTTCTCCTCTGTCAGGTCCTTaGGGACACTCTCCATGTCCTCCAACTTCTCCTTCATGTTTCTGG +
Preference number: 1 (lower is better)
Translates to: RGSLAHLFSSPLSGP*GHSPCPPTSPSCFW
Trigger: CCAGAAACATGAAGGAGAAGTTGGAGGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGAGAAGAGAAAAGATGTGCTAAACTCCCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523371.5
3UTR CCA 90 bp CTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATaGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGGATGG +
Preference number: 1 (lower is better)
Translates to: LVLDVNMERMGYIKE*LAACFKEVPLVTGW
Trigger: CCATCCTGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.5
ENST00000520542.5
3UTR-3UTR TCA 90 bp GCGCACAGAGAATTCGTGCCTCAGGGTCATAGTCCATGTCAGGAGGACTGCTGGCCCAGTTCTGCTCCATaGCAGATTTCACCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: AHREFVPQGHSPCQEDCWPSSAP*QISPGP
Trigger: AGGACCAGGTGAAATCTGTCATGGAGCAGAACTGGG...CCAGCAGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTCTCTGTGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR GCA 90 bp TTTCACCTGGTCCTTCAACAGAGGAAGGGTCCCCTTCTCCAGGGCCTCAGCCACCTTTGCTCTAGATCCTaGCGAATATCCTCCTTGCCG +
Preference number: 2 (lower is better)
Translates to: FHLVLQQRKGPLLQGLSHLCSRS*RISSLP
Trigger: CGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAG...GTGGCTGAGGCCCTGGAGAAGGGGACCCTTCCTCTGTTGAAGGACCAGGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR GCA 90 bp GAGACAGAGGTAGGCCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACGCCTCAGCCACAAACTaGTGCTCTTCAGACAGCTCT +
Preference number: 2 (lower is better)
Translates to: ETEVGPSASSSRIETTTYASATN*CSSDSS
Trigger: AGAGCTGTCTGAAGAGCAGCAGTTTGTGGCTGAGGC...GTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGGCCTACCTCTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR GCA 90 bp CTCCAGCAGGATAGAGACAACAACATACAGCGCACAGAGAATTCGTGCCTCAGGCCATGTCAGGAGGACTaGTGGCCAGCTCATCCCAGT +
Preference number: 2 (lower is better)
Translates to: LQQDRDNNIQRTENSCLRPCQED*WPAHPS
Trigger: ACTGGGATGAGCTGGCCAGCAGTCCTCCTGACATGG...CCTGAGGCACGAATTCTCTGTGCGCTGTATGTTGTTGTCTCTATCCTGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR GCA 90 bp GTAGGCCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACAGCGCACAGCGCACAGAGAATTCGTaGCTCAGGGTCATAGTCCAT +
Preference number: 2 (lower is better)
Translates to: VGPSASSSRIETTTYSAQRTENS*LRVIVH
Trigger: ATGGACTATGACCCTGAGGCACGAATTCTCTGTGCG...CTGTGCGCTGTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGGCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR GCA 90 bp GAGAATTCGTGCCTCAGGGTCATAGTCCATGTCAGGAGGACTGCTGGCCAGCTCAGCTCATCCCAGTTCTaGTCCATGACAGATTTCACC +
Preference number: 2 (lower is better)
Translates to: ENSCLRVIVHVRRTAGQLSSSQF*SMTDFT
Trigger: GGTGAAATCTGTCATGGAGCAGAACTGGGATGAGCT...GAGCTGGCCAGCAGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR GCA 90 bp AGAGGTAGGCCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACAGCGCAGCTCATCCCAGTTCTaGTCCATGACAGATTTCACC +
Preference number: 2 (lower is better)
Translates to: RGRPLSQLQQDRDNNIQRSSSQF*SMTDFT
Trigger: GGTGAAATCTGTCATGGAGCAGAACTGGGATGAGCT...GCGCTGTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGGCCTACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR CCA 90 bp GAATTCGTGCCTCAGGGTCATAGTCCATGTCAGGAGGACTGCTGGCCAGCTCATCCAGGAAGTCCAGAATaGCTTTTGCACGCGCTTCTA +
Preference number: 2 (lower is better)
Translates to: EFVPQGHSPCQEDCWPAHPGSPE*LLHALL
Trigger: TAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGG...ATGAGCTGGCCAGCAGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR GCA 90 bp AAGACCCCAGCAGCATTAAAAAGGCTGCTTAGGAGAGGCTTGTCTGGGTCCTCCCTTTGCTCTAGATCCTaGCGAATATCCTCCTTGCCG +
Preference number: 2 (lower is better)
Translates to: KTPAALKRLLRRGLSGSSLCSRS*RISSLP
Trigger: CGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAG...GGAGGACCCAGACAAGCCTCTCCTAAGCAGCCTTTTTAATGCTGCTGGGGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR GCA 90 bp TGCTCCATGACAGATTTCACCTGGTCCTTCAACAGAGGAAGGGTCCCCTTCTCCTCAGCCACAAACTGCTaGTCTTCAGACAGCTCTAGC +
Preference number: 2 (lower is better)
Translates to: CSMTDFTWSFNRGRVPFSSATNC*SSDSSS
Trigger: GCTAGAGCTGTCTGAAGAGCAGCAGTTTGTGGCTGA...GGAGAAGGGGACCCTTCCTCTGTTGAAGGACCAGGTGAAATCTGTCATGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR CCA 90 bp GGCATCCAGGAAGTCCAGAATGGCTTTTGCACGCGCTTCTACCAAGACCCCAGCTCTCCTTCATGTTTCTaGAATCCTCCGAACCCAAAG +
Preference number: 2 (lower is better)
Translates to: GIQEVQNGFCTRFYQDPSSPSCF*NPPNPK
Trigger: CTTTGGGTTCGGAGGATTCCAGAAACATGAAGGAGA...GCTGGGGTCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523371.5
3UTR-3UTR CCA 90 bp CTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACAGCGCACAGAGAATTCGCCAGGAAGTCCAGAATaGCTTTTGCACGCGCTTCTA +
Preference number: 2 (lower is better)
Translates to: LSQLQQDRDNNIQRTENSPGSPE*LLHALL
Trigger: TAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGG...CGAATTCTCTGTGCGCTGTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR GCA 90 bp GACAGAGGTAGGCCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACAGACCTCAGATACTCTTTaGTCTAGATCCTGCCGAATA +
Preference number: 2 (lower is better)
Translates to: DRGRPLSQLQQDRDNNIQTSDTL*SRSCRI
Trigger: TATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGT...CTGTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGGCCTACCTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR CAA 90 bp AGGACCTCAGATACTCTTTGCTCTAGATCCTGCCGAATATCCTCCTaGCCGAGGCACTTAGCGAGGGAGTTTAGCACATCTTTTCTCTTC +
Preference number: 2 (lower is better)
Translates to: RTSDTLCSRSCRISS*PRHLAREFSTSFLF
Trigger: GAAGAGAAAAGATGTGCTAAACTCCCTCGCTAAGTGCCTCGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468820.1
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR TCA 90 bp TCCAGGCTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGAAGAGGTCCCACTGGTaGCAGGATGGTAGTGGCGAT +
Preference number: 2 (lower is better)
Translates to: SRLVLDVNMERMGYIKEWKRSHW*QDGSGD
Trigger: ATCGCCACTACCATCCTGTCACCAGTGGGACCTCTT...CCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAGCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.5
ENST00000520542.5
3UTR-3UTR GCA 90 bp CTCCATGACAGATTTCACCTGGTCCTTCAACAGAGGAAGGGTCCCCTTCTCCAGACCTCAGATACTCTTTaGTCTAGATCCTGCCGAATA +
Preference number: 2 (lower is better)
Translates to: LHDRFHLVLQQRKGPLLQTSDTL*SRSCRI
Trigger: TATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGT...CTGGAGAAGGGGACCCTTCCTCTGTTGAAGGACCAGGTGAAATCTGTCATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR TCA 90 bp CTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTAAGAGGTCCCACTGGTaGCAGGATGGTAGTGGCGAT +
Preference number: 2 (lower is better)
Translates to: LVLDVNMERMGYIKEWLAKRSHW*QDGSGD
Trigger: ATCGCCACTACCATCCTGTCACCAGTGGGACCTCTT...AGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.5
ENST00000520542.5
3UTR-3UTR TCA 90 bp TGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTAAGAGGTCCCACTGGTaGCAGGATGGTAGTGGCGAT +
Preference number: 2 (lower is better)
Translates to: WMLTWSEWDTSKNGWLLVKRSHW*QDGSGD
Trigger: ATCGCCACTACCATCCTGTCACCAGTGGGACCTCTT...AACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.5
ENST00000520542.5
3UTR-3UTR TCA 90 bp TTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTAAGAGGTCCCACTGGTaGCAGGATGGTAGTGGCGAT +
Preference number: 2 (lower is better)
Translates to: FWMLTWSEWDTSKNGWLLKRSHW*QDGSGD
Trigger: ATCGCCACTACCATCCTGTCACCAGTGGGACCTCTT...AAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.5
ENST00000520542.5
3UTR CAA 90 bp CTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGGTTTaGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTG +
Preference number: 2 (lower is better)
Translates to: LPLLIRSPCMKSRLV*DVNMERMGYIKEWL
Trigger: CAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.5
ENST00000520542.5
3UTR-3UTR CCA 90 bp AACATGCACAACCTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGTTAACATGGAGCGAATaGGATACATCAAAGAATGGT +
Preference number: 2 (lower is better)
Translates to: NMHNLPLLIRSPCMKSRLLTWSE*DTSKNG
Trigger: ACCATTCTTTGATGTATCCCATTCGCTCCATGTTAA...CAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAGGTTGTGCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.5
ENST00000520542.5
3UTR-3UTR CCA 90 bp CTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGGTTTTGGATGTTACATCAAAGAATGGTTaGCTGCTTGTTTTAAAGAGG +
Preference number: 2 (lower is better)
Translates to: LPLLIRSPCMKSRLVLDVTSKNG*LLVLKR
Trigger: CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGT...AACATCCAAAACCAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.5
ENST00000520542.5
3UTR-3UTR CAA 90 bp ACAGCGCACAGAGAATTCGTGCCTCAGGGTCATAGTCCATGTCAGGAGGACTGCTCCTCTGTCAGGTCCTaGAGGACACTCTCCATGTCC +
Preference number: 3 (lower is better)
Translates to: TAHREFVPQGHSPCQEDCSSVRS*RTLSMS
Trigger: GGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGA...GCAGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTCTCTGTGCGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR CAA 90 bp GAATTCGTGCCTCAGGGTCATAGTCCATGTCAGGAGGACTGCTGGCCAGCTCATCTGCTTAGGAGAGGCTaGTCTGGGTCCTCCATGTGT +
Preference number: 3 (lower is better)
Translates to: EFVPQGHSPCQEDCWPAHLLRRG*SGSSMC
Trigger: ACACATGGAGGACCCAGACAAGCCTCTCCTAAGCAG...ATGAGCTGGCCAGCAGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR CAA 90 bp CATCCAGGAAGTCCAGAATGGCTTTTGCACGCGCTTCTACCAAGACCCCAGCAGCTGCTTAGGAGAGGCTaGTCTGGGTCCTCCATGTGT +
Preference number: 3 (lower is better)
Translates to: HPGSPEWLLHALLPRPQQLLRRG*SGSSMC
Trigger: ACACATGGAGGACCCAGACAAGCCTCTCCTAAGCAG...CTGCTGGGGTCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR CAA 90 bp CCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACAGCGCACAGAGAATTCCTCTGTCAGGTCCTaGAGGACACTCTCCATGTCC +
Preference number: 3 (lower is better)
Translates to: PLSQLQQDRDNNIQRTENSSVRS*RTLSMS
Trigger: GGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGA...ATTCTCTGTGCGCTGTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523371.5
ENST00000524039.5
3UTR GCA 72 bp ATGTCAGGAGGACTGCTGGCCAGCTCATCCCAGTTCTaGTCCATGACAGATTTCACCTGGTCCTTCAACAGA +
Preference number: 3 (lower is better)
Translates to: MSGGLLASSSQF*SMTDFTWSFNR
Trigger: TCTGTTGAAGGACCAGGTGAAATCTGTCATGGAGCAGAACTGGGATGAGCTGGCCAGCAGTCCTCCTGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR CAA 90 bp TCAGGACCTCAGATACTCTTTGCTCTAGATCCTGCCGAATATCCTCCTTGCCGATCCTCTGTCAGGTCCTaGAGGACACTCTCCATGTCC +
Preference number: 3 (lower is better)
Translates to: SGPQILFALDPAEYPPCRSSVRS*RTLSMS
Trigger: GGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGA...TCGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468820.1
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR CAA 90 bp ATACAGCGCACAGAGAATTCGTGCCTCAGGGTCATAGTCCATGTCAGGAGGACTAGTCCAGAATGGCTTTaGCACGCGCTTCTACCAAGA +
Preference number: 3 (lower is better)
Translates to: IQRTENSCLRVIVHVRRTSPEWL*HALLPR
Trigger: TCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACT...AGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTCTCTGTGCGCTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR GCA 72 bp GAAATCAGGACCTCAGATACTCTTTGCTCTAGATCCTaGCGAATATCCTCCTTGCCGAGGCACTTAGCGAGG +
Preference number: 3 (lower is better)
Translates to: EIRTSDTLCSRS*RISSLPRHLAR
Trigger: CCTCGCTAAGTGCCTCGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGTCCTGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468820.1
ENST00000523371.5
ENST00000524039.5
3UTR GCA 72 bp GATAGAGACAACAACATACAGCGCACAGAGAATTCGTaGCTCAGGGTCATAGTCCATGTCAGGAGGACTGCT +
Preference number: 3 (lower is better)
Translates to: DRDNNIQRTENS*LRVIVHVRRTA
Trigger: AGCAGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTCTCTGTGCGCTGTATGTTGTTGTCTCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR-3UTR CAA 90 bp AGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACGGAAAACCCAGAGGCTaGTGGGGAGAAAGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: SEWDTSKNGWLLVLKRSHGKPRG*WGERAF
Trigger: AAAAGCCCTTTCTCCCCACAAGCCTCTGGGTTTTCC...GTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.5
ENST00000520542.5
3UTR-3UTR CAA 90 bp GGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGGAAAACCCAGAGGCTaGTGGGGAGAAAGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: GYIKEWLAACFKEVPLVTGKPRG*WGERAF
Trigger: AAAAGCCCTTTCTCCCCACAAGCCTCTGGGTTTTCC...TGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.5
ENST00000520542.5
3UTR-3UTR CAA 90 bp GAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCAGGAAAACCCAGAGGCTaGTGGGGAGAAAGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: ERMGYIKEWLAACFKEVPGKPRG*WGERAF
Trigger: AAAAGCCCTTTCTCCCCACAAGCCTCTGGGTTTTCC...TGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.5
ENST00000520542.5
3UTR-3UTR CAA 90 bp TGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCGGAAAACCCAGAGGCTaGTGGGGAGAAAGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: WSEWDTSKNGWLLVLKRSGKPRG*WGERAF
Trigger: AAAAGCCCTTTCTCCCCACAAGCCTCTGGGTTTTCC...GGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.5
ENST00000520542.5
3UTR-3UTR CAA 90 bp ATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCGGAAAACCCAGAGGCTaGTGGGGAGAAAGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: MERMGYIKEWLAACFKEVGKPRG*WGERAF
Trigger: AAAAGCCCTTTCTCCCCACAAGCCTCTGGGTTTTCC...GACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.5
ENST00000520542.5
3UTR CCA 72 bp AATCCAGGCTGGTTTTGGATGTTAACATGGAGCGAATaGGATACATCAAAGAATGGTTGGCTGCTTGTTTTA +
Preference number: 3 (lower is better)
Translates to: NPGWFWMLTWSE*DTSKNGWLLVL
Trigger: TAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAGCCTGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.5
ENST00000520542.5
3UTR-3UTR CAA 90 bp CTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGGTTTTGGATGTTTACATCAAAGAATGGTaGGCTGCTTGTTTTAAAGAG +
Preference number: 3 (lower is better)
Translates to: LPLLIRSPCMKSRLVLDVYIKEW*AACFKE
Trigger: CTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTA...AACATCCAAAACCAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.5
ENST00000520542.5
CDS-3UTR GCA 90 bp GATTTCACCTGGTCCTTCAACAGAGGAAGGGTCCCCTTCTCCAGGGCCTCAGCCCCATGTCAGGAGGACTaGTGGCCAGCTCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: DFTWSFNRGRVPFSRASAPCQED*WPAHPS
Trigger: ACTGGGATGAGCTGGCCAGCAGTCCTCCTGACATGG...GGCTGAGGCCCTGGAGAAGGGGACCCTTCCTCTGTTGAAGGACCAGGTGAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp AGAGAATTCGTGCCTCAGGGTCATAGTCCATGTCAGGAGGACTGCTGGCCAGCTCCATGTCAGGAGGACTaGTGGCCAGCTCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: REFVPQGHSPCQEDCWPAPCQED*WPAHPS
Trigger: ACTGGGATGAGCTGGCCAGCAGTCCTCCTGACATGG...AGCTGGCCAGCAGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp GGCATCCAGGAAGTCCAGAATGGCTTTTGCACGCGCTTCTACCAAGACCCCAGCGCCTCAGCCACAAACTaGTGCTCTTCAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: GIQEVQNGFCTRFYQDPSASATN*CSSDSS
Trigger: AGAGCTGTCTGAAGAGCAGCAGTTTGTGGCTGAGGC...GCTGGGGTCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp GGCTTGTCTGGGTCCTCCATGTGTAGCTCCCCGGAAATCAGGACCTCAGATACTAGGGTAGCCAGATACTaGTGGGATATCCGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GLSGSSMCSSPEIRTSDTRVARY*WDIRFS
Trigger: GGAGAACCGGATATCCCAGCAGTATCTGGCTACCCT...AGTATCTGAGGTCCTGATTTCCGGGGAGCTACACATGGAGGACCCAGACAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp CATCCAGGAAGTCCAGAATGGCTTTTGCACGCGCTTCTACCAAGACCCCAGCAGAGGGTAGCCAGATACTaGTGGGATATCCGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: HPGSPEWLLHALLPRPQQRVARY*WDIRFS
Trigger: GGAGAACCGGATATCCCAGCAGTATCTGGCTACCCT...CTGCTGGGGTCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp GATTTCACCTGGTCCTTCAACAGAGGAAGGGTCCCCTTCTCCAGGGCCTCAGCCAGCTCATCCCAGTTCTaGTCCATGACAGATTTCACC +
Preference number: 4 (lower is better)
Translates to: DFTWSFNRGRVPFSRASASSSQF*SMTDFT
Trigger: GGTGAAATCTGTCATGGAGCAGAACTGGGATGAGCT...GGCTGAGGCCCTGGAGAAGGGGACCCTTCCTCTGTTGAAGGACCAGGTGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp AGGACCTCAGATACTCTTTGCTCTAGATCCTGCCGAATATCCTCCTTGCCGAGGCCATGTCAGGAGGACTaGTGGCCAGCTCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: RTSDTLCSRSCRISSLPRPCQED*WPAHPS
Trigger: ACTGGGATGAGCTGGCCAGCAGTCCTCCTGACATGG...CCTCGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CCA 90 bp AGAGGTAGGCCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACAGCGCGTAGCCAGATACTGCTaGGATATCCGGTTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: RGRPLSQLQQDRDNNIQRVARYC*DIRFSD
Trigger: ATCGGAGAACCGGATATCCCAGCAGTATCTGGCTAC...GCGCTGTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGGCCTACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR TCA 90 bp GACAGATTTCACCTGGTCCTTCAACAGAGGAAGGGTCCCCTTCTCCAGGGCCTCCCTTGTGTTTATAGCTaGGATGGCCCTGAGAGATCT +
Preference number: 4 (lower is better)
Translates to: DRFHLVLQQRKGPLLQGLPCVYS*DGPERS
Trigger: AGATCTCTCAGGGCCATCTCAGCTATAAACACAAGG...GAGGCCCTGGAGAAGGGGACCCTTCCTCTGTTGAAGGACCAGGTGAAATCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524039.5
CDS-3UTR GCA 90 bp AGGGCATCCAGGAAGTCCAGAATGGCTTTTGCACGCGCTTCTACCAAGACCCCACTTTGCTCTAGATCCTaGCGAATATCCTCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: RASRKSRMAFARASTKTPLCSRS*RISSLP
Trigger: CGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAG...TGGGGTCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGGATGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp GACAGAGGTAGGCCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACAGGTCCAGAATGGCTTTTaGACGCGCTTCTACCAAGAC +
Preference number: 4 (lower is better)
Translates to: DRGRPLSQLQQDRDNNIQVQNGF*TRFYQD
Trigger: GTCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGAC...CTGTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGGCCTACCTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp GATGGCAGTGAGGACAGACTGGTAAAGGGAAAACCCAGAGGCTTGTGGGGAGAAGCCTCAGCCACAAACTaGTGCTCTTCAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: DGSEDRLVKGKPRGLWGEASATN*CSSDSS
Trigger: AGAGCTGTCTGAAGAGCAGCAGTTTGTGGCTGAGGC...TTCTCCCCACAAGCCTCTGGGTTTTCCCTTTACCAGTCTGTCCTCACTGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp GAATTCGTGCCTCAGGGTCATAGTCCATGTCAGGAGGACTGCTGGCCAGCTCATCGCACAGAGAATTCGTaGCTCAGGGTCATAGTCCAT +
Preference number: 4 (lower is better)
Translates to: EFVPQGHSPCQEDCWPAHRTENS*LRVIVH
Trigger: ATGGACTATGACCCTGAGGCACGAATTCTCTGTGCG...ATGAGCTGGCCAGCAGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CCA 90 bp GAGACAGAGGTAGGCCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACGTAGCCAGATACTGCTaGGATATCCGGTTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: ETEVGPSASSSRIETTTYVARYC*DIRFSD
Trigger: ATCGGAGAACCGGATATCCCAGCAGTATCTGGCTAC...GTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGGCCTACCTCTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CCA 90 bp CATGACAGATTTCACCTGGTCCTTCAACAGAGGAAGGGTCCCCTTCTCCAGGGCGTAGCCAGATACTGCTaGGATATCCGGTTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: HDRFHLVLQQRKGPLLQGVARYC*DIRFSD
Trigger: ATCGGAGAACCGGATATCCCAGCAGTATCTGGCTAC...GCCCTGGAGAAGGGGACCCTTCCTCTGTTGAAGGACCAGGTGAAATCTGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR TCA 90 bp GACAGATTTCACCTGGTCCTTCAACAGAGGAAGGGTCCCCTTCTCCAGGGCCTCGGTTCTCCGATATCTTaGTTTTCTGATGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: DRFHLVLQQRKGPLLQGLGSPIS*FSDGGS
Trigger: GCTTCCACCATCAGAAAATCAAGATATCGGAGAACC...GAGGCCCTGGAGAAGGGGACCCTTCCTCTGTTGAAGGACCAGGTGAAATCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR TCA 90 bp ATACAGCGCACAGAGAATTCGTGCCTCAGGGTCATAGTCCATGTCAGGAGGACTCCCAGTTCTGCTCCATaGCAGATTTCACCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: IQRTENSCLRVIVHVRRTPSSAP*QISPGP
Trigger: AGGACCAGGTGAAATCTGTCATGGAGCAGAACTGGG...AGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTCTCTGTGCGCTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR TCA 90 bp AGGACCTCAGATACTCTTTGCTCTAGATCCTGCCGAATATCCTCCTTGCCGAGGCCCAGTTCTGCTCCATaGCAGATTTCACCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: RTSDTLCSRSCRISSLPRPSSAP*QISPGP
Trigger: AGGACCAGGTGAAATCTGTCATGGAGCAGAACTGGG...CCTCGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp AGGACCTCAGATACTCTTTGCTCTAGATCCTGCCGAATATCCTCCTTGCCGAGGAGGGTAGCCAGATACTaGTGGGATATCCGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: RTSDTLCSRSCRISSLPRRVARY*WDIRFS
Trigger: GGAGAACCGGATATCCCAGCAGTATCTGGCTACCCT...CCTCGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp GATGGCAGTGAGGACAGACTGGTAAAGGGAAAACCCAGAGGCTTGTGGGGAGAAGTCCAGAATGGCTTTTaGACGCGCTTCTACCAAGAC +
Preference number: 4 (lower is better)
Translates to: DGSEDRLVKGKPRGLWGEVQNGF*TRFYQD
Trigger: GTCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGAC...TTCTCCCCACAAGCCTCTGGGTTTTCCCTTTACCAGTCTGTCCTCACTGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp AAGACCCCAGCAGCATTAAAAAGGCTGCTTAGGAGAGGCTTGTCTGGGTCCTCCGTCCAGAATGGCTTTTaGACGCGCTTCTACCAAGAC +
Preference number: 4 (lower is better)
Translates to: KTPAALKRLLRRGLSGSSVQNGF*TRFYQD
Trigger: GTCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGAC...GGAGGACCCAGACAAGCCTCTCCTAAGCAGCCTTTTTAATGCTGCTGGGGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp AAGACCCCAGCAGCATTAAAAAGGCTGCTTAGGAGAGGCTTGTCTGGGTCCTCCTCAGCCACAAACTGCTaGTCTTCAGACAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: KTPAALKRLLRRGLSGSSSATNC*SSDSSS
Trigger: GCTAGAGCTGTCTGAAGAGCAGCAGTTTGTGGCTGA...GGAGGACCCAGACAAGCCTCTCCTAAGCAGCCTTTTTAATGCTGCTGGGGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp CCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACAGCGCACAGAGAATTGCCTCAGCCACAAACTaGTGCTCTTCAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: PSASSSRIETTTYSAQRIASATN*CSSDSS
Trigger: AGAGCTGTCTGAAGAGCAGCAGTTTGTGGCTGAGGC...AATTCTCTGTGCGCTGTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp GACAGAGGTAGGCCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACAGAGCTCATCCCAGTTCTaGTCCATGACAGATTTCACC +
Preference number: 4 (lower is better)
Translates to: DRGRPLSQLQQDRDNNIQSSSQF*SMTDFT
Trigger: GGTGAAATCTGTCATGGAGCAGAACTGGGATGAGCT...CTGTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGGCCTACCTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp GAGACAGAGGTAGGCCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACAGCTCATCCCAGTTCTaGTCCATGACAGATTTCACC +
Preference number: 4 (lower is better)
Translates to: ETEVGPSASSSRIETTTYSSSQF*SMTDFT
Trigger: GGTGAAATCTGTCATGGAGCAGAACTGGGATGAGCT...GTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGGCCTACCTCTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CCA 90 bp GATGGCAGTGAGGACAGACTGGTAAAGGGAAAACCCAGAGGCTTGTGGGGAGAATTCTCCCCCACCAGATaGAAGCAGCGGAATCTATCA +
Preference number: 4 (lower is better)
Translates to: DGSEDRLVKGKPRGLWGEFSPTR*KQRNLS
Trigger: TGATAGATTCCGCTGCTTCCATCTGGTGGGGGAGAA...TTCTCCCCACAAGCCTCTGGGTTTTCCCTTTACCAGTCTGTCCTCACTGCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp GATGGCAGTGAGGACAGACTGGTAAAGGGAAAACCCAGAGGCTTGTGGGGAGAATCTCTGCACAGTTCCTaGCCTCTGAATCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DGSEDRLVKGKPRGLWGESLHSS*PLNLRK
Trigger: CTTCCTGAGATTCAGAGGCCAGGAACTGTGCAGAGA...TTCTCCCCACAAGCCTCTGGGTTTTCCCTTTACCAGTCTGTCCTCACTGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520542.5
CDS-3UTR TCA 90 bp GGTAGGCCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACAGCGCACAGATATCTTGATTTTCTaGTGGTGGAAGCCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GRPLSQLQQDRDNNIQRTDILIF*WWKPWK
Trigger: TTTCCAGGGCTTCCACCATCAGAAAATCAAGATATC...TGTGCGCTGTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGGCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR TCA 90 bp CTGCTTAGGAGAGGCTTGTCTGGGTCCTCCATGTGTAGCTCCCCGGAAATCAGGGATATCTTGATTTTCTaGTGGTGGAAGCCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LLRRGLSGSSMCSSPEIRDILIF*WWKPWK
Trigger: TTTCCAGGGCTTCCACCATCAGAAAATCAAGATATC...CCTGATTTCCGGGGAGCTACACATGGAGGACCCAGACAAGCCTCTCCTAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR TCA 90 bp AGGGCATCCAGGAAGTCCAGAATGGCTTTTGCACGCGCTTCTACCAAGACCCCAGGTTCTCCGATATCTTaGTTTTCTGATGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: RASRKSRMAFARASTKTPGSPIS*FSDGGS
Trigger: GCTTCCACCATCAGAAAATCAAGATATCGGAGAACC...TGGGGTCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGGATGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR TCA 90 bp GCTTCTACCAAGACCCCAGCAGCATTAAAAAGGCTGCTTAGGAGAGGCTTGTCTCCCAGTTCTGCTCCATaGCAGATTTCACCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ASTKTPAALKRLLRRGLSPSSAP*QISPGP
Trigger: AGGACCAGGTGAAATCTGTCATGGAGCAGAACTGGG...AGACAAGCCTCTCCTAAGCAGCCTTTTTAATGCTGCTGGGGTCTTGGTAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR TCA 90 bp AGGGCATCCAGGAAGTCCAGAATGGCTTTTGCACGCGCTTCTACCAAGACCCCATCTTGTGTTTATAGCTaGGATGGCCCTGAGAGATCT +
Preference number: 4 (lower is better)
Translates to: RASRKSRMAFARASTKTPSCVYS*DGPERS
Trigger: AGATCTCTCAGGGCCATCTCAGCTATAAACACAAGA...TGGGGTCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGGATGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523371.5
CDS-3UTR GCA 90 bp AGGACCTCAGATACTCTTTGCTCTAGATCCTGCCGAATATCCTCCTTGCCGAGGCTTTGCTCTAGATCCTaGCGAATATCCTCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: RTSDTLCSRSCRISSLPRLCSRS*RISSLP
Trigger: CGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAG...CCTCGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000468820.1
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp GAGAATTCGTGCCTCAGGGTCATAGTCCATGTCAGGAGGACTGCTGGCCAGCTCACCTCAGATACTCTTTaGTCTAGATCCTGCCGAATA +
Preference number: 4 (lower is better)
Translates to: ENSCLRVIVHVRRTAGQLTSDTL*SRSCRI
Trigger: TATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGT...GAGCTGGCCAGCAGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp TCTACCAAGACCCCAGCAGCATTAAAAAGGCTGCTTAGGAGAGGCTTGTCTGGGGTCCAGAATGGCTTTTaGACGCGCTTCTACCAAGAC +
Preference number: 4 (lower is better)
Translates to: STKTPAALKRLLRRGLSGVQNGF*TRFYQD
Trigger: GTCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGAC...CCCAGACAAGCCTCTCCTAAGCAGCCTTTTTAATGCTGCTGGGGTCTTGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp TCTACCAAGACCCCAGCAGCATTAAAAAGGCTGCTTAGGAGAGGCTTGTCTGGGTCAGCCACAAACTGCTaGTCTTCAGACAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: STKTPAALKRLLRRGLSGSATNC*SSDSSS
Trigger: GCTAGAGCTGTCTGAAGAGCAGCAGTTTGTGGCTGA...CCCAGACAAGCCTCTCCTAAGCAGCCTTTTTAATGCTGCTGGGGTCTTGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp TTGTCTGGGTCCTCCATGTGTAGCTCCCCGGAAATCAGGACCTCAGATACTCTTTCAGCCACAAACTGCTaGTCTTCAGACAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LSGSSMCSSPEIRTSDTLSATNC*SSDSSS
Trigger: GCTAGAGCTGTCTGAAGAGCAGCAGTTTGTGGCTGA...AAGAGTATCTGAGGTCCTGATTTCCGGGGAGCTACACATGGAGGACCCAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp TCTTTTCTCTTCTCCTCTGTCAGGTCCTTGAGGACACTCTCCATGTCCTCCAACGCCTCAGCCACAAACTaGTGCTCTTCAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: SFLFSSVRSLRTLSMSSNASATN*CSSDSS
Trigger: AGAGCTGTCTGAAGAGCAGCAGTTTGTGGCTGAGGC...GTTGGAGGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGAGAAGAGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp GATGGCAGTGAGGACAGACTGGTAAAGGGAAAACCCAGAGGCTTGTGGGGAGAAAGCTCATCCCAGTTCTaGTCCATGACAGATTTCACC +
Preference number: 4 (lower is better)
Translates to: DGSEDRLVKGKPRGLWGESSSQF*SMTDFT
Trigger: GGTGAAATCTGTCATGGAGCAGAACTGGGATGAGCT...TTCTCCCCACAAGCCTCTGGGTTTTCCCTTTACCAGTCTGTCCTCACTGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp TGTCTGGGTCCTCCATGTGTAGCTCCCCGGAAATCAGGACCTCAGATACTCTTTCGCACAGAGAATTCGTaGCTCAGGGTCATAGTCCAT +
Preference number: 4 (lower is better)
Translates to: CLGPPCVAPRKSGPQILFRTENS*LRVIVH
Trigger: ATGGACTATGACCCTGAGGCACGAATTCTCTGTGCG...AAAGAGTATCTGAGGTCCTGATTTCCGGGGAGCTACACATGGAGGACCCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CCA 90 bp ATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGGATGGGCTCAGGACCCGATTTaGGGGGATGGTCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: IKEWLAACFKEVPLVTGWAQDPI*GDGHFP
Trigger: AGGGAAGTGACCATCCCCCCAAATCGGGTCCTGAGC...CCATCCTGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp TGTCTGGGTCCTCCATGTGTAGCTCCCCGGAAATCAGGACCTCAGATACTCTTTCCAGGAAGTCCAGAATaGCTTTTGCACGCGCTTCTA +
Preference number: 4 (lower is better)
Translates to: CLGPPCVAPRKSGPQILFPGSPE*LLHALL
Trigger: TAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGG...AAAGAGTATCTGAGGTCCTGATTTCCGGGGAGCTACACATGGAGGACCCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CCA 90 bp GCAGCATTAAAAAGGCTGCTTAGGAGAGGCTTGTCTGGGTCCTCCATGTGTAGCCCAGGAAGTCCAGAATaGCTTTTGCACGCGCTTCTA +
Preference number: 4 (lower is better)
Translates to: AALKRLLRRGLSGSSMCSPGSPE*LLHALL
Trigger: TAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGG...GCTACACATGGAGGACCCAGACAAGCCTCTCCTAAGCAGCCTTTTTAATGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR TCA 90 bp AGAGAATTCGTGCCTCAGGGTCATAGTCCATGTCAGGAGGACTGCTGGCCAGCTGATATCTTGATTTTCTaGTGGTGGAAGCCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: REFVPQGHSPCQEDCWPADILIF*WWKPWK
Trigger: TTTCCAGGGCTTCCACCATCAGAAAATCAAGATATC...AGCTGGCCAGCAGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR TCA 90 bp ATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGGATGGAAGAGGTCCCACTGGTaGCAGGATGGTAGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: IKEWLAACFKEVPLVTGWKRSHW*QDGSGD
Trigger: ATCGCCACTACCATCCTGTCACCAGTGGGACCTCTT...CCATCCTGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp GATGGCAGTGAGGACAGACTGGTAAAGGGAAAACCCAGAGGCTTGTGGGGAGAATCAGAAGTCCATGTATaGAATCCAGGCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: DGSEDRLVKGKPRGLWGESEVHV*NPGWFW
Trigger: CCAAAACCAGCCTGGATTTCATACATGGACTTCTGA...TTCTCCCCACAAGCCTCTGGGTTTTCCCTTTACCAGTCTGTCCTCACTGCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp GAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACCATGTCAGGAGGACTaGTGGCCAGCTCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: ERMGYIKEWLAACFKEVPPCQED*WPAHPS
Trigger: ACTGGGATGAGCTGGCCAGCAGTCCTCCTGACATGG...TGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp TGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCCATGTCAGGAGGACTaGTGGCCAGCTCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: WSEWDTSKNGWLLVLKRSPCQED*WPAHPS
Trigger: ACTGGGATGAGCTGGCCAGCAGTCCTCCTGACATGG...GGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp ATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGCCATGTCAGGAGGACTaGTGGCCAGCTCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: MGYIKEWLAACFKEVPLVPCQED*WPAHPS
Trigger: ACTGGGATGAGCTGGCCAGCAGTCCTCCTGACATGG...CACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp TGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCGCTCAGGACCCGATTTaGGGGGATGGTCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: WSEWDTSKNGWLLVLKRSAQDPI*GDGHFP
Trigger: AGGGAAGTGACCATCCCCCCAAATCGGGTCCTGAGC...GGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp GAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCAGCTCAGGACCCGATTTaGGGGGATGGTCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: ERMGYIKEWLAACFKEVPAQDPI*GDGHFP
Trigger: AGGGAAGTGACCATCCCCCCAAATCGGGTCCTGAGC...TGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp CCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACAGCGCACAGAGAATTCTCCTTCATGTTTCTaGAATCCTCCGAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: PLSQLQQDRDNNIQRTENSPSCF*NPPNPK
Trigger: CTTTGGGTTCGGAGGATTCCAGAAACATGAAGGAGA...ATTCTCTGTGCGCTGTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CCA 90 bp AGCAGGATAGAGACAACAACATACAGCGCACAGAGAATTCGTGCCTCAGGGTCACCAGGAAGTCCAGAATaGCTTTTGCACGCGCTTCTA +
Preference number: 4 (lower is better)
Translates to: SRIETTTYSAQRIRASGSPGSPE*LLHALL
Trigger: TAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGG...TGACCCTGAGGCACGAATTCTCTGTGCGCTGTATGTTGTTGTCTCTATCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
3UTR CAA 72 bp GATACTCTTTGCTCTAGATCCTGCCGAATATCCTCCTaGCCGAGGCACTTAGCGAGGGAGTTTAGCACATCT +
Preference number: 4 (lower is better)
Translates to: DTLCSRSCRISS*PRHLAREFSTS
Trigger: AGATGTGCTAAACTCCCTCGCTAAGTGCCTCGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAGAGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468820.1
ENST00000523371.5
ENST00000524039.5
CDS-3UTR TCA 90 bp GGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGGACCAACTCCTCTCTaGCCTCAGCTGTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: GYIKEWLAACFKEVPLVTGPTPL*PQLFTR
Trigger: TCTGGTGAACAGCTGAGGTCAGAGAGGAGTTGGTCC...TGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309481.11
CDS-3UTR TCA 90 bp AGAGAATTCGTGCCTCAGGGTCATAGTCCATGTCAGGAGGACTGCTGGCCAGCTTATCAACTCTCCCGTTaGGTCTACATTATCCAGAAT +
Preference number: 4 (lower is better)
Translates to: REFVPQGHSPCQEDCWPAYQLSR*VYIIQN
Trigger: ATTCTGGATAATGTAGACTCAACGGGAGAGTTGATA...AGCTGGCCAGCAGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR TCA 90 bp GAATTCGTGCCTCAGGGTCATAGTCCATGTCAGGAGGACTGCTGGCCAGCTCATTATCAACTCTCCCGTTaGGTCTACATTATCCAGAAT +
Preference number: 4 (lower is better)
Translates to: EFVPQGHSPCQEDCWPAHYQLSR*VYIIQN
Trigger: ATTCTGGATAATGTAGACTCAACGGGAGAGTTGATA...ATGAGCTGGCCAGCAGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR TCA 90 bp TGCCGAATATCCTCCTTGCCGAGGCACTTAGCGAGGGAGTTTAGCACATCTTTTCCTTGTGTTTATAGCTaGGATGGCCCTGAGAGATCT +
Preference number: 4 (lower is better)
Translates to: CRISSLPRHLAREFSTSFPCVYS*DGPERS
Trigger: AGATCTCTCAGGGCCATCTCAGCTATAAACACAAGG...AAAAGATGTGCTAAACTCCCTCGCTAAGTGCCTCGGCAAGGAGGATATTCGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468820.1
ENST00000524039.5
CDS-3UTR TCA 90 bp ATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGAAGAGGTCCCACTGGTaGCAGGATGGTAGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: MGYIKEWLAACFKEVPLVKRSHW*QDGSGD
Trigger: ATCGCCACTACCATCCTGTCACCAGTGGGACCTCTT...CACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp CATGACAGATTTCACCTGGTCCTTCAACAGAGGAAGGGTCCCCTTCTCCAGGGCCTCCAAAATTTATATTaGCGGTCGCTTTTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: HDRFHLVLQQRKGPLLQGLQNLY*RSLFRV
Trigger: AACCCTGAAAAGCGACCGGCAATATAAATTTTGGAG...GCCCTGGAGAAGGGGACCCTTCCTCTGTTGAAGGACCAGGTGAAATCTGTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp ATCTTTTCTCTTCTCCTCTGTCAGGTCCTTGAGGACACTCTCCATGTCCTCCAACTTTGCTCTAGATCCTaGCGAATATCCTCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: IFSLLLCQVLEDTLHVLQLCSRS*RISSLP
Trigger: CGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAG...TTGGAGGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGAGAAGAGAAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468820.1
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp CAGGATAGAGACAACAACATACAGCGCACAGAGAATTCGTGCCTCAGGGTCATACTTTGCTCTAGATCCTaGCGAATATCCTCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: QDRDNNIQRTENSCLRVILCSRS*RISSLP
Trigger: CGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAG...TATGACCCTGAGGCACGAATTCTCTGTGCGCTGTATGTTGTTGTCTCTATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp AACATGCACAACCTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGCCATGTCAGGAGGACTaGTGGCCAGCTCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: NMHNLPLLIRSPCMKSRLPCQED*WPAHPS
Trigger: ACTGGGATGAGCTGGCCAGCAGTCCTCCTGACATGG...CAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAGGTTGTGCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp ATATCCTCCTTGCCGAGGCACTTAGCGAGGGAGTTTAGCACATCTTTTCTCTTCCGCACAGAGAATTCGTaGCTCAGGGTCATAGTCCAT +
Preference number: 4 (lower is better)
Translates to: ISSLPRHLAREFSTSFLFRTENS*LRVIVH
Trigger: ATGGACTATGACCCTGAGGCACGAATTCTCTGTGCG...GAAGAGAAAAGATGTGCTAAACTCCCTCGCTAAGTGCCTCGGCAAGGAGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CCA 90 bp TCCAGGCTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGGCTGAACATTGCGCCTaGACCAACTCCTCTCTGACC +
Preference number: 4 (lower is better)
Translates to: SRLVLDVNMERMGYIKEWAEHCA*TNSSLT
Trigger: GGTCAGAGAGGAGTTGGTCCAGGCGCAATGTTCAGC...CCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAGCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309481.11
CDS-3UTR TCA 90 bp AACATGCACAACCTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGGAATGTCCATCAGGGTaGGGCCTGTTGTGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: NMHNLPLLIRSPCMKSRLECPSG*GLLCSA
Trigger: GGCACTACACAACAGGCCTCACCCTGATGGACATTC...CAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAGGTTGTGCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp TGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCCCAGTTCTGCTCCATaGCAGATTTCACCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: WSEWDTSKNGWLLVLKRSPSSAP*QISPGP
Trigger: AGGACCAGGTGAAATCTGTCATGGAGCAGAACTGGG...GGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp ACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGAAGAGGTCCCACTGGTaGCAGGATGGTAGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: TWSEWDTSKNGWLLVLKRKRSHW*QDGSGD
Trigger: ATCGCCACTACCATCCTGTCACCAGTGGGACCTCTT...CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp ATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCAAGAGGTCCCACTGGTaGCAGGATGGTAGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: MERMGYIKEWLAACFKEVKRSHW*QDGSGD
Trigger: ATCGCCACTACCATCCTGTCACCAGTGGGACCTCTT...GACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp GATGGCAGTGAGGACAGACTGGTAAAGGGAAAACCCAGAGGCTTGTGGGGAGAAGGAAGCCCTGGAAACTaGCTGAAATTGTTATTTCTT +
Preference number: 4 (lower is better)
Translates to: DGSEDRLVKGKPRGLWGEGSPGN*LKLLFL
Trigger: AAGAAATAACAATTTCAGGCAGTTTCCAGGGCTTCC...TTCTCCCCACAAGCCTCTGGGTTTTCCCTTTACCAGTCTGTCCTCACTGCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp GAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCAAGGGTAGCCAGATACTaGTGGGATATCCGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: ERMGYIKEWLAACFKEVPRVARY*WDIRFS
Trigger: GGAGAACCGGATATCCCAGCAGTATCTGGCTACCCT...TGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp TCCAGGCTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGAGGGTAGCCAGATACTaGTGGGATATCCGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SRLVLDVNMERMGYIKEWRVARY*WDIRFS
Trigger: GGAGAACCGGATATCCCAGCAGTATCTGGCTACCCT...CCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp TCCATGACAGATTTCACCTGGTCCTTCAACAGAGGAAGGGTCCCCTTCTCCAGGCTCCAAAATTTATATTaGCGGTCGCTTTTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SMTDFTWSFNRGRVPFSRLQNLY*RSLFRV
Trigger: AACCCTGAAAAGCGACCGGCAATATAAATTTTGGAG...CCTGGAGAAGGGGACCCTTCCTCTGTTGAAGGACCAGGTGAAATCTGTCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp CCTCAGATACTCTTTGCTCTAGATCCTGCCGAATATCCTCCTTGCCGAGGCACTACCTCAGATACTCTTTaGTCTAGATCCTGCCGAATA +
Preference number: 4 (lower is better)
Translates to: PQILFALDPAEYPPCRGTTSDTL*SRSCRI
Trigger: TATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGT...AGTGCCTCGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468820.1
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp GGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGCCTCAGCCACAAACTaGTGCTCTTCAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: GYIKEWLAACFKEVPLVTASATN*CSSDSS
Trigger: AGAGCTGTCTGAAGAGCAGCAGTTTGTGGCTGAGGC...TGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp ATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGGCCTCAGCCACAAACTaGTGCTCTTCAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: MGYIKEWLAACFKEVPLVASATN*CSSDSS
Trigger: AGAGCTGTCTGAAGAGCAGCAGTTTGTGGCTGAGGC...CACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp GAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCAGCCTCAGCCACAAACTaGTGCTCTTCAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: ERMGYIKEWLAACFKEVPASATN*CSSDSS
Trigger: AGAGCTGTCTGAAGAGCAGCAGTTTGTGGCTGAGGC...TGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp TCCAGGCTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGGCCTCAGCCACAAACTaGTGCTCTTCAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: SRLVLDVNMERMGYIKEWASATN*CSSDSS
Trigger: AGAGCTGTCTGAAGAGCAGCAGTTTGTGGCTGAGGC...CCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp CTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGGTTTTGGATGTTCCATGTCAGGAGGACTaGTGGCCAGCTCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: LPLLIRSPCMKSRLVLDVPCQED*WPAHPS
Trigger: ACTGGGATGAGCTGGCCAGCAGTCCTCCTGACATGG...AACATCCAAAACCAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp ATGTGTAGCTCCCCGGAAATCAGGACCTCAGATACTCTTTGCTCTAGATCCTGCTCTCCTTCATGTTTCTaGAATCCTCCGAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: MCSSPEIRTSDTLCSRSCSPSCF*NPPNPK
Trigger: CTTTGGGTTCGGAGGATTCCAGAAACATGAAGGAGA...GCAGGATCTAGAGCAAAGAGTATCTGAGGTCCTGATTTCCGGGGAGCTACACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CCA 90 bp ATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGGATGGCCAGGAAGTCCAGAATaGCTTTTGCACGCGCTTCTA +
Preference number: 4 (lower is better)
Translates to: IKEWLAACFKEVPLVTGWPGSPE*LLHALL
Trigger: TAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGG...CCATCCTGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp CTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGGTTTTGGATGTTGAATGTCCATCAGGGTaGGGCCTGTTGTGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: LPLLIRSPCMKSRLVLDVECPSG*GLLCSA
Trigger: GGCACTACACAACAGGCCTCACCCTGATGGACATTC...AACATCCAAAACCAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp CTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTCCCAGTTCTGCTCCATaGCAGATTTCACCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LVLDVNMERMGYIKEWLAPSSAP*QISPGP
Trigger: AGGACCAGGTGAAATCTGTCATGGAGCAGAACTGGG...AGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp ATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCCAGTTCTGCTCCATaGCAGATTTCACCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: MERMGYIKEWLAACFKEVPSSAP*QISPGP
Trigger: AGGACCAGGTGAAATCTGTCATGGAGCAGAACTGGG...GACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp AACATGCACAACCTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGCCCAGTTCTGCTCCATaGCAGATTTCACCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: NMHNLPLLIRSPCMKSRLPSSAP*QISPGP
Trigger: AGGACCAGGTGAAATCTGTCATGGAGCAGAACTGGG...CAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAGGTTGTGCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp CTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGGTTTTGGATGTTGAGGTGTCAGGCCTCTaGACCCAAGCTAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: LPLLIRSPCMKSRLVLDVEVSGL*TQAKPS
Trigger: TGATGGCTTAGCTTGGGTTCAGAGGCCTGACACCTC...AACATCCAAAACCAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394175.6
CDS-3UTR TCA 90 bp CTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGGTTTTGGATGTTATTGCGCCTCCTCTCTaGCCTCAGCTGTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: LPLLIRSPCMKSRLVLDVIAPPL*PQLFTR
Trigger: TCTGGTGAACAGCTGAGGTCAGAGAGGAGGCGCAAT...AACATCCAAAACCAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520542.5
CDS-3UTR GCA 90 bp ACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGAGGGTAGCCAGATACTaGTGGGATATCCGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TWSEWDTSKNGWLLVLKRRVARY*WDIRFS
Trigger: GGAGAACCGGATATCCCAGCAGTATCTGGCTACCCT...CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp AACATGCACAACCTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGAGGGTAGCCAGATACTaGTGGGATATCCGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: NMHNLPLLIRSPCMKSRLRVARY*WDIRFS
Trigger: GGAGAACCGGATATCCCAGCAGTATCTGGCTACCCT...CAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAGGTTGTGCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp AGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACCTTTGCTCTAGATCCTaGCGAATATCCTCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: SEWDTSKNGWLLVLKRSHLCSRS*RISSLP
Trigger: CGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAG...GTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp GGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACACTTTGCTCTAGATCCTaGCGAATATCCTCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: GYIKEWLAACFKEVPLVTLCSRS*RISSLP
Trigger: CGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAG...TGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp ATGTGTAGCTCCCCGGAAATCAGGACCTCAGATACTCTTTGCTCTAGATCCTGCACCTCAGATACTCTTTaGTCTAGATCCTGCCGAATA +
Preference number: 4 (lower is better)
Translates to: MCSSPEIRTSDTLCSRSCTSDTL*SRSCRI
Trigger: TATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGT...GCAGGATCTAGAGCAAAGAGTATCTGAGGTCCTGATTTCCGGGGAGCTACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp TTTGCACGCGCTTCTACCAAGACCCCAGCAGCATTAAAAAGGCTGCTTAGGAGAACCTCAGATACTCTTTaGTCTAGATCCTGCCGAATA +
Preference number: 4 (lower is better)
Translates to: FARASTKTPAALKRLLRRTSDTL*SRSCRI
Trigger: TATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGT...TCTCCTAAGCAGCCTTTTTAATGCTGCTGGGGTCTTGGTAGAAGCGCGTGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp AGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACGTCCAGAATGGCTTTTaGACGCGCTTCTACCAAGAC +
Preference number: 4 (lower is better)
Translates to: SEWDTSKNGWLLVLKRSHVQNGF*TRFYQD
Trigger: GTCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGAC...GTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp ATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGTCAGCCACAAACTGCTaGTCTTCAGACAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: MGYIKEWLAACFKEVPLVSATNC*SSDSSS
Trigger: GCTAGAGCTGTCTGAAGAGCAGCAGTTTGTGGCTGA...CACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp ATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGCGCACAGAGAATTCGTaGCTCAGGGTCATAGTCCAT +
Preference number: 4 (lower is better)
Translates to: MGYIKEWLAACFKEVPLVRTENS*LRVIVH
Trigger: ATGGACTATGACCCTGAGGCACGAATTCTCTGTGCG...CACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp AGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACCGCACAGAGAATTCGTaGCTCAGGGTCATAGTCCAT +
Preference number: 4 (lower is better)
Translates to: SEWDTSKNGWLLVLKRSHRTENS*LRVIVH
Trigger: ATGGACTATGACCCTGAGGCACGAATTCTCTGTGCG...GTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp TGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCGCACAGAGAATTCGTaGCTCAGGGTCATAGTCCAT +
Preference number: 4 (lower is better)
Translates to: WSEWDTSKNGWLLVLKRSRTENS*LRVIVH
Trigger: ATGGACTATGACCCTGAGGCACGAATTCTCTGTGCG...GGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp AGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTTCTCCCCCACCAGATaGAAGCAGCGGAATCTATCA +
Preference number: 4 (lower is better)
Translates to: SEWDTSKNGWLLVLKRSHFSPTR*KQRNLS
Trigger: TGATAGATTCCGCTGCTTCCATCTGGTGGGGGAGAA...GTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp TGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCGTAGCCAGATACTGCTaGGATATCCGGTTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: WSEWDTSKNGWLLVLKRSVARYC*DIRFSD
Trigger: ATCGGAGAACCGGATATCCCAGCAGTATCTGGCTAC...GGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp ATCTTTTCTCTTCTCCTCTGTCAGGTCCTTGAGGACACTCTCCATGTCCTCCAATCTCCTTCATGTTTCTaGAATCCTCCGAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: IFSLLLCQVLEDTLHVLQSPSCF*NPPNPK
Trigger: CTTTGGGTTCGGAGGATTCCAGAAACATGAAGGAGA...TTGGAGGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGAGAAGAGAAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468820.1
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CCA 90 bp AGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACCCAGGAAGTCCAGAATaGCTTTTGCACGCGCTTCTA +
Preference number: 4 (lower is better)
Translates to: SEWDTSKNGWLLVLKRSHPGSPE*LLHALL
Trigger: TAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGG...GTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp GATGGCAGTGAGGACAGACTGGTAAAGGGAAAACCCAGAGGCTTGTGGGGAGAATTAACATGGAGCGAATaGGATACATCAAAGAATGGT +
Preference number: 4 (lower is better)
Translates to: DGSEDRLVKGKPRGLWGELTWSE*DTSKNG
Trigger: ACCATTCTTTGATGTATCCCATTCGCTCCATGTTAA...TTCTCCCCACAAGCCTCTGGGTTTTCCCTTTACCAGTCTGTCCTCACTGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp TCCAGGCTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTTCCTCAAATACGCTaGACATTGCGCCTGGACCAA +
Preference number: 4 (lower is better)
Translates to: SRLVLDVNMERMGYIKEWFPQIR*TLRLDQ
Trigger: TTGGTCCAGGCGCAATGTTCAGCGTATTTGAGGAAA...CCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAGCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309481.11
ENST00000394175.6
CDS-3UTR TCA 90 bp GGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACATTTCCTCAAATACGCTaGACATTGCGCCTGGACCAA +
Preference number: 4 (lower is better)
Translates to: GYIKEWLAACFKEVPLVTFPQIR*TLRLDQ
Trigger: TTGGTCCAGGCGCAATGTTCAGCGTATTTGAGGAAA...TGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309481.11
ENST00000394175.6
CDS-3UTR TCA 90 bp GAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACCTTGTGTTTATAGCTaGGATGGCCCTGAGAGATCT +
Preference number: 4 (lower is better)
Translates to: ERMGYIKEWLAACFKEVPPCVYS*DGPERS
Trigger: AGATCTCTCAGGGCCATCTCAGCTATAAACACAAGG...TGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp AGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACCCTTGTGTTTATAGCTaGGATGGCCCTGAGAGATCT +
Preference number: 4 (lower is better)
Translates to: SEWDTSKNGWLLVLKRSHPCVYS*DGPERS
Trigger: AGATCTCTCAGGGCCATCTCAGCTATAAACACAAGG...GTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp TCCAGGCTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGCCTTGTGTTTATAGCTaGGATGGCCCTGAGAGATCT +
Preference number: 4 (lower is better)
Translates to: SRLVLDVNMERMGYIKEWPCVYS*DGPERS
Trigger: AGATCTCTCAGGGCCATCTCAGCTATAAACACAAGG...CCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAGCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp ATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGGATGGCAGAAATGGAAGTTGTaGGAATCCCCACAGATCTCT +
Preference number: 4 (lower is better)
Translates to: IKEWLAACFKEVPLVTGWQKWKL*ESPQIS
Trigger: AGAGATCTGTGGGGATTCTCACAACTTCCATTTCTG...CCATCCTGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520542.5
CDS-3UTR GCA 90 bp TTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTAGGGTAGCCAGATACTaGTGGGATATCCGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: FWMLTWSEWDTSKNGWLLRVARY*WDIRFS
Trigger: GGAGAACCGGATATCCCAGCAGTATCTGGCTACCCT...AAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp CGAATATCCTCCTTGCCGAGGCACTTAGCGAGGGAGTTTAGCACATCTTTTCTCCTCCAAAATTTATATTaGCGGTCGCTTTTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: RISSLPRHLAREFSTSFLLQNLY*RSLFRV
Trigger: AACCCTGAAAAGCGACCGGCAATATAAATTTTGGAG...GAGAAAAGATGTGCTAAACTCCCTCGCTAAGTGCCTCGGCAAGGAGGATATTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000468820.1
ENST00000523371.5
ENST00000524039.5
CDS-3UTR GCA 90 bp ACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGCTTTGCTCTAGATCCTaGCGAATATCCTCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: TWSEWDTSKNGWLLVLKRLCSRS*RISSLP
Trigger: CGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAG...CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp TGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTGTCCAGAATGGCTTTTaGACGCGCTTCTACCAAGAC +
Preference number: 4 (lower is better)
Translates to: WMLTWSEWDTSKNGWLLVVQNGF*TRFYQD
Trigger: GTCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGAC...AACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp GTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTGTCCAGAATGGCTTTTaGACGCGCTTCTACCAAGAC +
Preference number: 4 (lower is better)
Translates to: VLDVNMERMGYIKEWLAAVQNGF*TRFYQD
Trigger: GTCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGAC...AGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp ATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCTCAGCCACAAACTGCTaGTCTTCAGACAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: MERMGYIKEWLAACFKEVSATNC*SSDSSS
Trigger: GCTAGAGCTGTCTGAAGAGCAGCAGTTTGTGGCTGA...GACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp GTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTCAGCCACAAACTGCTaGTCTTCAGACAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: VLDVNMERMGYIKEWLAASATNC*SSDSSS
Trigger: GCTAGAGCTGTCTGAAGAGCAGCAGTTTGTGGCTGA...AGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp AACATGCACAACCTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGTCAGCCACAAACTGCTaGTCTTCAGACAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: NMHNLPLLIRSPCMKSRLSATNC*SSDSSS
Trigger: GCTAGAGCTGTCTGAAGAGCAGCAGTTTGTGGCTGA...CAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAGGTTGTGCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp TCCAGGCTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGAGCTCATCCCAGTTCTaGTCCATGACAGATTTCACC +
Preference number: 4 (lower is better)
Translates to: SRLVLDVNMERMGYIKEWSSSQF*SMTDFT
Trigger: GGTGAAATCTGTCATGGAGCAGAACTGGGATGAGCT...CCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAGCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp ATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGAGCTCATCCCAGTTCTaGTCCATGACAGATTTCACC +
Preference number: 4 (lower is better)
Translates to: MGYIKEWLAACFKEVPLVSSSQF*SMTDFT
Trigger: GGTGAAATCTGTCATGGAGCAGAACTGGGATGAGCT...CACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp AACATGCACAACCTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGCGCACAGAGAATTCGTaGCTCAGGGTCATAGTCCAT +
Preference number: 4 (lower is better)
Translates to: NMHNLPLLIRSPCMKSRLRTENS*LRVIVH
Trigger: ATGGACTATGACCCTGAGGCACGAATTCTCTGTGCG...CAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAGGTTGTGCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp ATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCTTCTCCCCCACCAGATaGAAGCAGCGGAATCTATCA +
Preference number: 4 (lower is better)
Translates to: MERMGYIKEWLAACFKEVFSPTR*KQRNLS
Trigger: TGATAGATTCCGCTGCTTCCATCTGGTGGGGGAGAA...GACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp CTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGTAGCCAGATACTGCTaGGATATCCGGTTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: LVLDVNMERMGYIKEWLAVARYC*DIRFSD
Trigger: ATCGGAGAACCGGATATCCCAGCAGTATCTGGCTAC...AGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp AACATGCACAACCTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGGTAGCCAGATACTGCTaGGATATCCGGTTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: NMHNLPLLIRSPCMKSRLVARYC*DIRFSD
Trigger: ATCGGAGAACCGGATATCCCAGCAGTATCTGGCTAC...CAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAGGTTGTGCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp GTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTCCAGGAAGTCCAGAATaGCTTTTGCACGCGCTTCTA +
Preference number: 4 (lower is better)
Translates to: VLDVNMERMGYIKEWLAAPGSPE*LLHALL
Trigger: TAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGG...AGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp AGACAACAACATACAGCGCACAGAGAATTCGTGCCTCAGGGTCATAGTCCATGTTATCAACTCTCCCGTTaGGTCTACATTATCCAGAAT +
Preference number: 4 (lower is better)
Translates to: RQQHTAHREFVPQGHSPCYQLSR*VYIIQN
Trigger: ATTCTGGATAATGTAGACTCAACGGGAGAGTTGATA...ACATGGACTATGACCCTGAGGCACGAATTCTCTGTGCGCTGTATGTTGTTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR TCA 90 bp TGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCGGTTCTCCGATATCTTaGTTTTCTGATGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: WSEWDTSKNGWLLVLKRSGSPIS*FSDGGS
Trigger: GCTTCCACCATCAGAAAATCAAGATATCGGAGAACC...GGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp GGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGGTTCTCCGATATCTTaGTTTTCTGATGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: GYIKEWLAACFKEVPLVTGSPIS*FSDGGS
Trigger: GCTTCCACCATCAGAAAATCAAGATATCGGAGAACC...TGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp TCCAGGCTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGGGTTCTCCGATATCTTaGTTTTCTGATGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SRLVLDVNMERMGYIKEWGSPIS*FSDGGS
Trigger: GCTTCCACCATCAGAAAATCAAGATATCGGAGAACC...CCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAGCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp CTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTCCTTGTGTTTATAGCTaGGATGGCCCTGAGAGATCT +
Preference number: 4 (lower is better)
Translates to: LVLDVNMERMGYIKEWLAPCVYS*DGPERS
Trigger: AGATCTCTCAGGGCCATCTCAGCTATAAACACAAGG...AGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp GAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCATCAGAAGTCCATGTATaGAATCCAGGCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: ERMGYIKEWLAACFKEVPSEVHV*NPGWFW
Trigger: CCAAAACCAGCCTGGATTTCATACATGGACTTCTGA...TGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp TGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTTCCTCAAATACGCTaGACATTGCGCCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: WMLTWSEWDTSKNGWLLVFPQIR*TLRLLS
Trigger: AGAGAGGAGGCGCAATGTTCAGCGTATTTGAGGAAA...AACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520542.5
CDS-3UTR GCA 90 bp AACATGCACAACCTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGAAATACGCTGAACATTaGGCCTGGACCAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: NMHNLPLLIRSPCMKSRLKYAEH*AWTNSS
Trigger: AGAGGAGTTGGTCCAGGCGCAATGTTCAGCGTATTT...CAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAGGTTGTGCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309481.11
CDS-3UTR GCA 90 bp AACATGCACAACCTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGAGCTCATCCCAGTTCTaGTCCATGACAGATTTCACC +
Preference number: 4 (lower is better)
Translates to: NMHNLPLLIRSPCMKSRLSSSQF*SMTDFT
Trigger: GGTGAAATCTGTCATGGAGCAGAACTGGGATGAGCT...CAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAGGTTGTGCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp TTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTTTCTCCCCCACCAGATaGAAGCAGCGGAATCTATCA +
Preference number: 4 (lower is better)
Translates to: FWMLTWSEWDTSKNGWLLFSPTR*KQRNLS
Trigger: TGATAGATTCCGCTGCTTCCATCTGGTGGGGGAGAA...AAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp TTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTAGCCAGATACTGCTaGGATATCCGGTTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: FWMLTWSEWDTSKNGWLLVARYC*DIRFSD
Trigger: ATCGGAGAACCGGATATCCCAGCAGTATCTGGCTAC...AAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp GAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCATCATCGTCTCCTTGTTaGGGAAGACAAGCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: ERMGYIKEWLAACFKEVPSSSPC*GRQAAL
Trigger: TAAAGCAGCTTGTCTTCCCCAACAAGGAGACGATGA...TGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp TGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCTCTCCTTCATGTTTCTaGAATCCTCCGAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: WSEWDTSKNGWLLVLKRSSPSCF*NPPNPK
Trigger: CTTTGGGTTCGGAGGATTCCAGAAACATGAAGGAGA...GGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp AGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTCTCCTTCATGTTTCTaGAATCCTCCGAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: SEWDTSKNGWLLVLKRSHSPSCF*NPPNPK
Trigger: CTTTGGGTTCGGAGGATTCCAGAAACATGAAGGAGA...GTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp TTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTCCAGGAAGTCCAGAATaGCTTTTGCACGCGCTTCTA +
Preference number: 4 (lower is better)
Translates to: FWMLTWSEWDTSKNGWLLPGSPE*LLHALL
Trigger: TAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGG...AAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp CTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGGTTTTGGATGTTCCAGGAAGTCCAGAATaGCTTTTGCACGCGCTTCTA +
Preference number: 4 (lower is better)
Translates to: LPLLIRSPCMKSRLVLDVPGSPE*LLHALL
Trigger: TAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGG...AACATCCAAAACCAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp ACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGGCTGAACATTGCGCCTaGACCAACTCAGAAACAGAA +
Preference number: 4 (lower is better)
Translates to: TWSEWDTSKNGWLLVLKRAEHCA*TNSETE
Trigger: TTCTGTTTCTGAGTTGGTCCAGGCGCAATGTTCAGC...CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394175.6
3UTR CAA 72 bp GTTAACATGGAGCGAATGGGATACATCAAAGAATGGTaGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACA +
Preference number: 4 (lower is better)
Translates to: VNMERMGYIKEW*AACFKEVPLVT
Trigger: TGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.5
ENST00000520542.5
CDS-3UTR TCA 90 bp ATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGGATGGTATCAACTCTCCCGTTaGGTCTACATTATCCAGAAT +
Preference number: 4 (lower is better)
Translates to: IKEWLAACFKEVPLVTGWYQLSR*VYIIQN
Trigger: ATTCTGGATAATGTAGACTCAACGGGAGAGTTGATA...CCATCCTGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp ATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGGATATCTTGATTTTCTaGTGGTGGAAGCCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: MGYIKEWLAACFKEVPLVDILIF*WWKPWK
Trigger: TTTCCAGGGCTTCCACCATCAGAAAATCAAGATATC...CACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp TCCAGGCTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGGATATCTTGATTTTCTaGTGGTGGAAGCCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SRLVLDVNMERMGYIKEWDILIF*WWKPWK
Trigger: TTTCCAGGGCTTCCACCATCAGAAAATCAAGATATC...CCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAGCCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp ATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCGGTTCTCCGATATCTTaGTTTTCTGATGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: MERMGYIKEWLAACFKEVGSPIS*FSDGGS
Trigger: GCTTCCACCATCAGAAAATCAAGATATCGGAGAACC...GACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp AACATGCACAACCTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGGGTTCTCCGATATCTTaGTTTTCTGATGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: NMHNLPLLIRSPCMKSRLGSPIS*FSDGGS
Trigger: GCTTCCACCATCAGAAAATCAAGATATCGGAGAACC...CAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAGGTTGTGCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp TTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTCCTTGTGTTTATAGCTaGGATGGCCCTGAGAGATCT +
Preference number: 4 (lower is better)
Translates to: FWMLTWSEWDTSKNGWLLPCVYS*DGPERS
Trigger: AGATCTCTCAGGGCCATCTCAGCTATAAACACAAGG...AAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp ATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCTCAGAAGTCCATGTATaGAATCCAGGCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: MERMGYIKEWLAACFKEVSEVHV*NPGWFW
Trigger: CCAAAACCAGCCTGGATTTCATACATGGACTTCTGA...GACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp TGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTCAGAAGTCCATGTATaGAATCCAGGCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: WMLTWSEWDTSKNGWLLVSEVHV*NPGWFW
Trigger: CCAAAACCAGCCTGGATTTCATACATGGACTTCTGA...AACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp ACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCAGAAGTCCATGTATaGAATCCAGGCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: TWSEWDTSKNGWLLVLKRSEVHV*NPGWFW
Trigger: CCAAAACCAGCCTGGATTTCATACATGGACTTCTGA...CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp GGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGTTTTGCCCCTGAAATaGATATTCATCGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GYIKEWLAACFKEVPLVTVLPLK*IFIVSL
Trigger: CAAGGAGACGATGAATATTCATTTCAGGGGCAAAAC...TGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360317.7
ENST00000520542.5
CDS-3UTR TCA 90 bp GTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTCCATCATATTCCCTGTaGCCTGCATGTATACATCCA +
Preference number: 4 (lower is better)
Translates to: VLDVNMERMGYIKEWLAAPSYSL*PACIHP
Trigger: TGGATGTATACATGCAGGTCACAGGGAATATGATGG...AGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394175.6
CDS-3UTR GCA 90 bp ATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGGATGGCTCCAAAATTTATATTaGCGGTCGCTTTTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: IKEWLAACFKEVPLVTGWLQNLY*RSLFRV
Trigger: AACCCTGAAAAGCGACCGGCAATATAAATTTTGGAG...CCATCCTGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp GAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCAACCTCAGATACTCTTTaGTCTAGATCCTGCCGAATA +
Preference number: 4 (lower is better)
Translates to: ERMGYIKEWLAACFKEVPTSDTL*SRSCRI
Trigger: TATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGT...TGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp TGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCACCTCAGATACTCTTTaGTCTAGATCCTGCCGAATA +
Preference number: 4 (lower is better)
Translates to: WSEWDTSKNGWLLVLKRSTSDTL*SRSCRI
Trigger: TATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGT...GGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp TTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTAGCTCATCCCAGTTCTaGTCCATGACAGATTTCACC +
Preference number: 4 (lower is better)
Translates to: FWMLTWSEWDTSKNGWLLSSSQF*SMTDFT
Trigger: GGTGAAATCTGTCATGGAGCAGAACTGGGATGAGCT...AAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp AACATGCACAACCTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGAAATACGCTGAACATTaGGCCTGGACCAACTCAGAA +
Preference number: 4 (lower is better)
Translates to: NMHNLPLLIRSPCMKSRLKYAEH*AWTNSE
Trigger: TTCTGAGTTGGTCCAGGCGCAATGTTCAGCGTATTT...CAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAGGTTGTGCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394175.6
CDS-3UTR CCA 90 bp ATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCTCATCGTCTCCTTGTTaGGGAAGACAAGCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: MERMGYIKEWLAACFKEVSSSPC*GRQAAL
Trigger: TAAAGCAGCTTGTCTTCCCCAACAAGGAGACGATGA...GACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp GTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTCATCGTCTCCTTGTTaGGGAAGACAAGCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: VLDVNMERMGYIKEWLAASSSPC*GRQAAL
Trigger: TAAAGCAGCTTGTCTTCCCCAACAAGGAGACGATGA...AGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp ACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCTCCTTCATGTTTCTaGAATCCTCCGAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: TWSEWDTSKNGWLLVLKRSPSCF*NPPNPK
Trigger: CTTTGGGTTCGGAGGATTCCAGAAACATGAAGGAGA...CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp TGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCAATCCAGGCTGGTTTTaGATGTTAACATGGAGCGAA +
Preference number: 4 (lower is better)
Translates to: WSEWDTSKNGWLLVLKRSNPGWF*MLTWSE
Trigger: TTCGCTCCATGTTAACATCCAAAACCAGCCTGGATT...GGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp AGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACAATCCAGGCTGGTTTTaGATGTTAACATGGAGCGAA +
Preference number: 4 (lower is better)
Translates to: SEWDTSKNGWLLVLKRSHNPGWF*MLTWSE
Trigger: TTCGCTCCATGTTAACATCCAAAACCAGCCTGGATT...GTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp AGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACGCCAATTTCAGTTTTTaGGAGGAGGGTATTGGTTCA +
Preference number: 4 (lower is better)
Translates to: SEWDTSKNGWLLVLKRSHANFSF*EEGIGS
Trigger: TGAACCAATACCCTCCTCCCAAAAACTGAAATTGGC...GTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394175.6
CDS-3UTR TCA 90 bp ATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGTATCAACTCTCCCGTTaGGTCTACATTATCCAGAAT +
Preference number: 4 (lower is better)
Translates to: MGYIKEWLAACFKEVPLVYQLSR*VYIIQN
Trigger: ATTCTGGATAATGTAGACTCAACGGGAGAGTTGATA...CACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp ATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCGATATCTTGATTTTCTaGTGGTGGAAGCCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: MERMGYIKEWLAACFKEVDILIF*WWKPWK
Trigger: TTTCCAGGGCTTCCACCATCAGAAAATCAAGATATC...GACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp GTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTGATATCTTGATTTTCTaGTGGTGGAAGCCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: VLDVNMERMGYIKEWLAADILIF*WWKPWK
Trigger: TTTCCAGGGCTTCCACCATCAGAAAATCAAGATATC...AGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp GGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGGAAGCCCTGGAAACTaGCTGAAATTGTTATTTCTT +
Preference number: 4 (lower is better)
Translates to: GYIKEWLAACFKEVPLVTGSPGN*LKLLFL
Trigger: AAGAAATAACAATTTCAGGCAGTTTCCAGGGCTTCC...TGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp TGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCTCCAAAATTTATATTaGCGGTCGCTTTTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: WSEWDTSKNGWLLVLKRSLQNLY*RSLFRV
Trigger: AACCCTGAAAAGCGACCGGCAATATAAATTTTGGAG...GGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp AGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACCTCCAAAATTTATATTaGCGGTCGCTTTTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SEWDTSKNGWLLVLKRSHLQNLY*RSLFRV
Trigger: AACCCTGAAAAGCGACCGGCAATATAAATTTTGGAG...GTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp GTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTACCTCAGATACTCTTTaGTCTAGATCCTGCCGAATA +
Preference number: 4 (lower is better)
Translates to: VLDVNMERMGYIKEWLAATSDTL*SRSCRI
Trigger: TATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGT...AGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp AACATGCACAACCTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGACCTCAGATACTCTTTaGTCTAGATCCTGCCGAATA +
Preference number: 4 (lower is better)
Translates to: NMHNLPLLIRSPCMKSRLTSDTL*SRSCRI
Trigger: TATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGT...CAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAGGTTGTGCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp ACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGACCTCAGATACTCTTTaGTCTAGATCCTGCCGAATA +
Preference number: 4 (lower is better)
Translates to: TWSEWDTSKNGWLLVLKRTSDTL*SRSCRI
Trigger: TATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGT...CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp CTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGGTTTTGGATGTTTCATCGTCTCCTTGTTaGGGAAGACAAGCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: LPLLIRSPCMKSRLVLDVSSSPC*GRQAAL
Trigger: TAAAGCAGCTTGTCTTCCCCAACAAGGAGACGATGA...AACATCCAAAACCAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp CTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGGTTTTGGATGTTTCTCCTTCATGTTTCTaGAATCCTCCGAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: LPLLIRSPCMKSRLVLDVSPSCF*NPPNPK
Trigger: CTTTGGGTTCGGAGGATTCCAGAAACATGAAGGAGA...AACATCCAAAACCAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp TTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTTCTCCTTCATGTTTCTaGAATCCTCCGAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: FWMLTWSEWDTSKNGWLLSPSCF*NPPNPK
Trigger: CTTTGGGTTCGGAGGATTCCAGAAACATGAAGGAGA...AAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp CTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTAATCCAGGCTGGTTTTaGATGTTAACATGGAGCGAA +
Preference number: 4 (lower is better)
Translates to: LVLDVNMERMGYIKEWLANPGWF*MLTWSE
Trigger: TTCGCTCCATGTTAACATCCAAAACCAGCCTGGATT...AGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp GTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTATCAACTCTCCCGTTaGGTCTACATTATCCAGAAT +
Preference number: 4 (lower is better)
Translates to: VLDVNMERMGYIKEWLAAYQLSR*VYIIQN
Trigger: ATTCTGGATAATGTAGACTCAACGGGAGAGTTGATA...AGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp GTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTGGAAGCCCTGGAAACTaGCTGAAATTGTTATTTCTT +
Preference number: 4 (lower is better)
Translates to: VLDVNMERMGYIKEWLAAGSPGN*LKLLFL
Trigger: AAGAAATAACAATTTCAGGCAGTTTCCAGGGCTTCC...AGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp ATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCTCCAAAATTTATATTaGCGGTCGCTTTTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: MERMGYIKEWLAACFKEVLQNLY*RSLFRV
Trigger: AACCCTGAAAAGCGACCGGCAATATAAATTTTGGAG...GACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp GAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCAACATCAAAGAATGGTTaGCTGCTTGTTTTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ERMGYIKEWLAACFKEVPTSKNG*LLVLKR
Trigger: CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGT...TGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp AGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACACATCAAAGAATGGTTaGCTGCTTGTTTTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SEWDTSKNGWLLVLKRSHTSKNG*LLVLKR
Trigger: CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGT...GTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp AGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTTAACATGGAGCGAATaGGATACATCAAAGAATGGT +
Preference number: 4 (lower is better)
Translates to: SEWDTSKNGWLLVLKRSHLTWSE*DTSKNG
Trigger: ACCATTCTTTGATGTATCCCATTCGCTCCATGTTAA...GTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp TGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCTTAACATGGAGCGAATaGGATACATCAAAGAATGGT +
Preference number: 4 (lower is better)
Translates to: WSEWDTSKNGWLLVLKRSLTWSE*DTSKNG
Trigger: ACCATTCTTTGATGTATCCCATTCGCTCCATGTTAA...GGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp TCCAGGCTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTTTGGATGTTAACATaGAGCGAATGGGATACATCA +
Preference number: 4 (lower is better)
Translates to: SRLVLDVNMERMGYIKEWFWMLT*SEWDTS
Trigger: TGATGTATCCCATTCGCTCCATGTTAACATCCAAAA...CCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAGCCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp GGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACATTTTGGATGTTAACATaGAGCGAATGGGATACATCA +
Preference number: 4 (lower is better)
Translates to: GYIKEWLAACFKEVPLVTFWMLT*SEWDTS
Trigger: TGATGTATCCCATTCGCTCCATGTTAACATCCAAAA...TGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp TTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTAATCCAGGCTGGTTTTaGATGTTAACATGGAGCGAA +
Preference number: 4 (lower is better)
Translates to: FWMLTWSEWDTSKNGWLLNPGWF*MLTWSE
Trigger: TTCGCTCCATGTTAACATCCAAAACCAGCCTGGATT...AAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR TCA 90 bp TTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTTATCAACTCTCCCGTTaGGTCTACATTATCCAGAAT +
Preference number: 4 (lower is better)
Translates to: FWMLTWSEWDTSKNGWLLYQLSR*VYIIQN
Trigger: ATTCTGGATAATGTAGACTCAACGGGAGAGTTGATA...AAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR GCA 90 bp TTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGGAAGCCCTGGAAACTaGCTGAAATTGTTATTTCTT +
Preference number: 4 (lower is better)
Translates to: FWMLTWSEWDTSKNGWLLGSPGN*LKLLFL
Trigger: AAGAAATAACAATTTCAGGCAGTTTCCAGGGCTTCC...AAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp TGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTACATCAAAGAATGGTTaGCTGCTTGTTTTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: WMLTWSEWDTSKNGWLLVTSKNG*LLVLKR
Trigger: CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGT...AACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp AACATGCACAACCTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGACATCAAAGAATGGTTaGCTGCTTGTTTTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: NMHNLPLLIRSPCMKSRLTSKNG*LLVLKR
Trigger: CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGT...CAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAGGTTGTGCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp GTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTTAACATGGAGCGAATaGGATACATCAAAGAATGGT +
Preference number: 4 (lower is better)
Translates to: VLDVNMERMGYIKEWLAALTWSE*DTSKNG
Trigger: ACCATTCTTTGATGTATCCCATTCGCTCCATGTTAA...AGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp ACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTTAACATGGAGCGAATaGGATACATCAAAGAATGGT +
Preference number: 4 (lower is better)
Translates to: TWSEWDTSKNGWLLVLKRLTWSE*DTSKNG
Trigger: ACCATTCTTTGATGTATCCCATTCGCTCCATGTTAA...CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp TGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTTTGGATGTTAACATaGAGCGAATGGGATACATCA +
Preference number: 4 (lower is better)
Translates to: WMLTWSEWDTSKNGWLLVFWMLT*SEWDTS
Trigger: TGATGTATCCCATTCGCTCCATGTTAACATCCAAAA...AACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp ACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTTTTGGATGTTAACATaGAGCGAATGGGATACATCA +
Preference number: 4 (lower is better)
Translates to: TWSEWDTSKNGWLLVLKRFWMLT*SEWDTS
Trigger: TGATGTATCCCATTCGCTCCATGTTAACATCCAAAA...CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp CTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTTTTTGGATGTTAACATaGAGCGAATGGGATACATCA +
Preference number: 4 (lower is better)
Translates to: LVLDVNMERMGYIKEWLAFWMLT*SEWDTS
Trigger: TGATGTATCCCATTCGCTCCATGTTAACATCCAAAA...AGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CCA 90 bp ATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGTTGGGAGGAGGGTATTaGTTCAAGTATTTAAATCTT +
Preference number: 4 (lower is better)
Translates to: MGYIKEWLAACFKEVPLVLGGGY*FKYLNL
Trigger: AAGATTTAAATACTTGAACCAATACCCTCCTCCCAA...CACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394175.6
CDS-3UTR CCA 90 bp GTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTCAAAGACTTTCCTTCTaGAAAGGATTTTGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: VLDVNMERMGYIKEWLAAQRLSF*KGFCFA
Trigger: GGCAAAACAAAATCCTTTCCAGAAGGAAAGTCTTTG...AGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520542.5
3UTR CAA 72 bp TTAATCAGAAGTCCATGTATGAAATCCAGGCTGGTTTaGGATGTTAACATGGAGCGAATGGGATACATCAAA +
Preference number: 4 (lower is better)
Translates to: LIRSPCMKSRLV*DVNMERMGYIK
Trigger: TTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAGCCTGGATTTCATACATGGACTTCTGATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.5
ENST00000520542.5
CDS TCA 90 bp TTGAAACCTGCTAGGCAGTGCCTCCCGACTTCCTACCCACTCAGCTaGCCCCACCTGAGCAGCAGTCTTGAGCCACATGGACTCAGGGTG +
Preference number: 5 (lower is better)
Translates to: LKPARQCLPTSYPLS*PHLSSSLEPHGLRV
Trigger: CACCCTGAGTCCATGTGGCTCAAGACTGCTGCTCAGGTGGGGTCAGCTGAGTGGGTAGGAAGTCGGGAGGCACTGCCTAGCAGGTTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477054.6
ENST00000479136.5
CDS GCA 90 bp GAAAAGAGGGCACCGCTAGAGAGTAACAAGGGAAGGACTGGGCAATaGCACCCACCCTTTCTTGGGGCAAGGTGGCCAAGAGCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: EKRAPLESNKGRTGQ*HPPFLGARWPRAAG
Trigger: CCCTGCTGCTCTTGGCCACCTTGCCCCAAGAAAGGGTGGGTGGCATTGCCCAGTCCTTCCCTTGTTACTCTCTAGCGGTGCCCTCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464556.1
CDS-3UTR CAA 90 bp TTTCACCTGGTCCTTCAACAGAGGAAGGGTCCCCTTCTCCAGGGCCTCAGCCACCTGCTTAGGAGAGGCTaGTCTGGGTCCTCCATGTGT +
Preference number: 5 (lower is better)
Translates to: FHLVLQQRKGPLLQGLSHLLRRG*SGSSMC
Trigger: ACACATGGAGGACCCAGACAAGCCTCTCCTAAGCAG...GTGGCTGAGGCCCTGGAGAAGGGGACCCTTCCTCTGTTGAAGGACCAGGTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS TCA 90 bp CTTGTACCTAAGGAGTGGGTAGGAGATCCTGGTATGTATTCTAGGTaGGTGTGGGCCAGACAATGGTGCACACCGTGGCGCCCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: LVPKEWVGDPGMYSR*VWARQWCTPWRPGP
Trigger: TGGCCCAGGGCGCCACGGTGTGCACCATTGTCTGGCCCACACTCACCTAGAATACATACCAGGATCTCCTACCCACTCCTTAGGTACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS GCA 90 bp AGCCTCCCTCCCCATCTCGTGCTCCCGTGTACACTCTCAAGGAGATaGTGGTCTTCCTTATCTGGATGCCATCTGGCTTCTCCACCTACC +
Preference number: 5 (lower is better)
Translates to: SLPPHLVLPCTLSRR*WSSLSGCHLASPPT
Trigger: GGTAGGTGGAGAAGCCAGATGGCATCCAGATAAGGAAGACCAGCATCTCCTTGAGAGTGTACACGGGAGCACGAGATGGGGAGGGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS GCA 90 bp GCCAGGGACATGAGGACCATAACCCAGCAGAACCAGCTGCCCAAATaGCATGCGACGGTCAACACTGAAGACCCAGGACAACAGCAGCTA +
Preference number: 5 (lower is better)
Translates to: ARDMRTITQQNQLPK*HATVNTEDPGQQQL
Trigger: TAGCTGCTGTTGTCCTGGGTCTTCAGTGTTGACCGTCGCATGGCATTTGGGCAGCTGGTTCTGCTGGGTTATGGTCCTCATGTCCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CCA 90 bp CCCCACCTGAGCAGCAGTCTTGAGCCACATGGACTCAGGGTGGGTTaGTGCAGCCACCCTGAACACACTTGGCTATCACCCTTACCTAAA +
Preference number: 5 (lower is better)
Translates to: PHLSSSLEPHGLRVG*CSHPEHTWLSPLPK
Trigger: TTTAGGTAAGGGTGATAGCCAAGTGTGTTCAGGGTGGCTGCACCAACCCACCCTGAGTCCATGTGGCTCAAGACTGCTGCTCAGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477054.6
ENST00000479136.5
CDS CCA 90 bp CTCCCTCCCCATCTCGTGCTCCCGTGTACACTCTCAAGGAGATGCTaGTCTTCCTTATCTGGATGCCATCTGGCTTCTCCACCTACCTCC +
Preference number: 5 (lower is better)
Translates to: LPPHLVLPCTLSRRC*SSLSGCHLASPPTS
Trigger: GGAGGTAGGTGGAGAAGCCAGATGGCATCCAGATAAGGAAGACCAGCATCTCCTTGAGAGTGTACACGGGAGCACGAGATGGGGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS GCA 90 bp CACCTGAGCAGCAGTCTTGAGCCACATGGACTCAGGGTGGGTTGGTaGAGCCACCCTGAACACACTTGGCTATCACCCTTACCTAAACAG +
Preference number: 5 (lower is better)
Translates to: HLSSSLEPHGLRVGW*SHPEHTWLSPLPKQ
Trigger: CTGTTTAGGTAAGGGTGATAGCCAAGTGTGTTCAGGGTGGCTGCACCAACCCACCCTGAGTCCATGTGGCTCAAGACTGCTGCTCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477054.6
ENST00000479136.5
CDS CCA 90 bp ATAAGAAGGGGCTGTACCCTGGGACTTCTGGGTCCCTTGAGAATATaGGCATTCCCTTCCACTATGACCATGGCCCTCAGCCCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: IRRGCTLGLLGPLRI*AFPSTMTMALSPGC
Trigger: ACAGCCTGGGCTGAGGGCCATGGTCATAGTGGAAGGGAATGCCCATATTCTCAAGGGACCCAGAAGTCCCAGGGTACAGCCCCTTCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486560.1
CDS-3UTR CAA 90 bp CTTTGCTCTAGATCCTGCCGAATATCCTCCTTGCCGAGGCACTTAGCGAGGGAGTCCTCTGTCAGGTCCTaGAGGACACTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: LCSRSCRISSLPRHLARESSVRS*RTLSMS
Trigger: GGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGA...CTCCCTCGCTAAGTGCCTCGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468820.1
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp GAAGAGACAGAGGTAGGCCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATCCTCTGTCAGGTCCTaGAGGACACTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: EETEVGPSASSSRIETTTSSVRS*RTLSMS
Trigger: GGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGA...TGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGGCCTACCTCTGTCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp GATGGCAGTGAGGACAGACTGGTAAAGGGAAAACCCAGAGGCTTGTGGGGAGAATGCCGAATATCCTCCTaGCCGAGGCACTTAGCGAGG +
Preference number: 5 (lower is better)
Translates to: DGSEDRLVKGKPRGLWGECRISS*PRHLAR
Trigger: CCTCGCTAAGTGCCTCGGCAAGGAGGATATTCGGCA...TTCTCCCCACAAGCCTCTGGGTTTTCCCTTTACCAGTCTGTCCTCACTGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS CCA 90 bp CACTGCTGGTGCCAGGGAGCCTGCATCCTCACCAGCGTGTGTCAATaGGAAAGCACTGTATTTGCAGACCCTTCCCACATCCTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: HCWCQGACILTSVCQ*ESTVFADPSHILKN
Trigger: GTTTTTGAGGATGTGGGAAGGGTCTGCAAATACAGTGCTTTCCCATTGACACACGCTGGTGAGGATGCAGGCTCCCTGGCACCAGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479136.5
ENST00000519429.1
CDS-3UTR CAA 90 bp GAGACAGAGGTAGGCCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACCTCAGCCTTTTGACCTaGGAGCCCAGAATCCAGTTC +
Preference number: 5 (lower is better)
Translates to: ETEVGPSASSSRIETTTYLSLLT*EPRIQF
Trigger: GAACTGGATTCTGGGCTCCAAGGTCAAAAGGCTGAG...GTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGGCCTACCTCTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp CAGCTCATCCCAGTTCTGCTCCATGACAGATTTCACCTGGTCCTTCAACAGAGGTGCCGAATATCCTCCTaGCCGAGGCACTTAGCGAGG +
Preference number: 5 (lower is better)
Translates to: QLIPVLLHDRFHLVLQQRCRISS*PRHLAR
Trigger: CCTCGCTAAGTGCCTCGGCAAGGAGGATATTCGGCA...CCTCTGTTGAAGGACCAGGTGAAATCTGTCATGGAGCAGAACTGGGATGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp CCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACAGCGCACAGAGAATTTGCCGAATATCCTCCTaGCCGAGGCACTTAGCGAGG +
Preference number: 5 (lower is better)
Translates to: PSASSSRIETTTYSAQRICRISS*PRHLAR
Trigger: CCTCGCTAAGTGCCTCGGCAAGGAGGATATTCGGCA...AATTCTCTGTGCGCTGTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp TCCTGCCGAATATCCTCCTTGCCGAGGCACTTAGCGAGGGAGTTTAGCACATCTCTGCTTAGGAGAGGCTaGTCTGGGTCCTCCATGTGT +
Preference number: 5 (lower is better)
Translates to: SCRISSLPRHLAREFSTSLLRRG*SGSSMC
Trigger: ACACATGGAGGACCCAGACAAGCCTCTCCTAAGCAG...AGATGTGCTAAACTCCCTCGCTAAGTGCCTCGGCAAGGAGGATATTCGGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523371.5
ENST00000524039.5
CDS TCA 90 bp GCCAGACTAGCCCCAACGTTGATGAACAGAGGAACCAGGGAGGAATaGCGGGCACGGTTGCCAGACTTCACATTACTAACCTCAACTGGT +
Preference number: 5 (lower is better)
Translates to: ARLAPTLMNRGTREE*RARLPDFTLLTSTG
Trigger: ACCAGTTGAGGTTAGTAATGTGAAGTCTGGCAACCGTGCCCGTCATTCCTCCCTGGTTCCTCTGTTCATCAACGTTGGGGCTAGTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CCA 90 bp CCACATGGACTCAGGGTGGGTTGGTGCAGCCACCCTGAACACACTTaGCTATCACCCTTACCTAAACAGGATGAAGCACCATCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: PHGLRVGWCSHPEHT*LSPLPKQDEAPSFS
Trigger: AGAGAAGGATGGTGCTTCATCCTGTTTAGGTAAGGGTGATAGCCAAGTGTGTTCAGGGTGGCTGCACCAACCCACCCTGAGTCCATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479136.5
CDS CCA 90 bp ATAATGAAACTGAAAGTTGTCCAGGTGTGGAACTTCCTGGACGGGTaGGTAGGGCTGGGTGCCCCACCTCCCAAGCCTTTAGATAAGCCA +
Preference number: 5 (lower is better)
Translates to: IMKLKVVQVWNFLDG*VGLGAPPPKPLDKP
Trigger: TGGCTTATCTAAAGGCTTGGGAGGTGGGGCACCCAGCCCTACCCACCCGTCCAGGAAGTTCCACACCTGGACAACTTTCAGTTTCATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CCA 90 bp GAATCTCAGGAAGCTAAAATAATGAAACTGAAAGTTGTCCAGGTGTaGAACTTCCTGGACGGGTGGGTAGGGCTGGGTGCCCCACCTCCC +
Preference number: 5 (lower is better)
Translates to: ESQEAKIMKLKVVQV*NFLDGWVGLGAPPP
Trigger: GGGAGGTGGGGCACCCAGCCCTACCCACCCGTCCAGGAAGTTCCACACCTGGACAACTTTCAGTTTCATTATTTTAGCTTCCTGAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CCA 90 bp GGAATGACGGGCACGGTTGCCAGACTTCACATTACTAACCTCAACTaGTCGTTTCTTCCCTTGGCTCTGATTCTTGGGCTCCCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: GMTGTVARLHITNLN*SFLPLALILGLPAL
Trigger: CAAGGCAGGGAGCCCAAGAATCAGAGCCAAGGGAAGAAACGACCAGTTGAGGTTAGTAATGTGAAGTCTGGCAACCGTGCCCGTCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS-3UTR CAA 90 bp GAGAATTCGTGCCTCAGGGTCATAGTCCATGTCAGGAGGACTGCTGGCCAGCTCAGTTCATCTAACCACTaGTCCCCATCTGTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: ENSCLRVIVHVRRTAGQLSSSNH*SPSVSR
Trigger: TCTGGACACAGATGGGGACAAGTGGTTAGATGAACT...GAGCTGGCCAGCAGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp AAGACCCCAGCAGCATTAAAAAGGCTGCTTAGGAGAGGCTTGTCTGGGTCCTCCCTCAGCCTTTTGACCTaGGAGCCCAGAATCCAGTTC +
Preference number: 5 (lower is better)
Translates to: KTPAALKRLLRRGLSGSSLSLLT*EPRIQF
Trigger: GAACTGGATTCTGGGCTCCAAGGTCAAAAGGCTGAG...GGAGGACCCAGACAAGCCTCTCCTAAGCAGCCTTTTTAATGCTGCTGGGGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp CTCCATGACAGATTTCACCTGGTCCTTCAACAGAGGAAGGGTCCCCTTCTCCAGCTCAGCCTTTTGACCTaGGAGCCCAGAATCCAGTTC +
Preference number: 5 (lower is better)
Translates to: LHDRFHLVLQQRKGPLLQLSLLT*EPRIQF
Trigger: GAACTGGATTCTGGGCTCCAAGGTCAAAAGGCTGAG...CTGGAGAAGGGGACCCTTCCTCTGTTGAAGGACCAGGTGAAATCTGTCATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp GGTAGGCCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACAGCGCACATTGAAACTCAGCCTTTaGACCTTGGAGCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: GRPLSQLQQDRDNNIQRTLKLSL*TLEPRI
Trigger: GATTCTGGGCTCCAAGGTCAAAAGGCTGAGTTTCAA...TGTGCGCTGTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGGCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp AGGACCTCAGATACTCTTTGCTCTAGATCCTGCCGAATATCCTCCTTGCCGAGGTCCTCTGTCAGGTCCTaGAGGACACTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: RTSDTLCSRSCRISSLPRSSVRS*RTLSMS
Trigger: GGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGA...CCTCGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAGAGTATCTGAGGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000468820.1
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp ATACAGCGCACAGAGAATTCGTGCCTCAGGGTCATAGTCCATGTCAGGAGGACTTCCTCTGTCAGGTCCTaGAGGACACTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: IQRTENSCLRVIVHVRRTSSVRS*RTLSMS
Trigger: GGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGA...AGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTCTCTGTGCGCTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp GAAGTCCAGAATGGCTTTTGCACGCGCTTCTACCAAGACCCCAGCAGCATTAAATGCCGAATATCCTCCTaGCCGAGGCACTTAGCGAGG +
Preference number: 5 (lower is better)
Translates to: EVQNGFCTRFYQDPSSIKCRISS*PRHLAR
Trigger: CCTCGCTAAGTGCCTCGGCAAGGAGGATATTCGGCA...TTTAATGCTGCTGGGGTCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp AGGGCATCCAGGAAGTCCAGAATGGCTTTTGCACGCGCTTCTACCAAGACCCCAAGTCCAGAATGGCTTTaGCACGCGCTTCTACCAAGA +
Preference number: 5 (lower is better)
Translates to: RASRKSRMAFARASTKTPSPEWL*HALLPR
Trigger: TCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACT...TGGGGTCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGGATGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS TCA 90 bp CCCACCTCCTCTCTGACCTCAGCTGTTCACCAGAAATGGAAGTTGTaGGAATCCCCACAGATCTCTGCACAGTTCCTGGCCTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: PTSSLTSAVHQKWKL*ESPQISAQFLASES
Trigger: AGATTCAGAGGCCAGGAACTGTGCAGAGATCTGTGGGGATTCTCACAACTTCCATTTCTGGTGAACAGCTGAGGTCAGAGAGGAGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS TCA 90 bp TGCGCCTCCTCTCTGACCTCAGCTGTTCACCAGAAATGGAAGTTGTaGGAATCCCCACAGATCTCTGCACAGTTCCTGGCCTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: CASSLTSAVHQKWKL*ESPQISAQFLASES
Trigger: AGATTCAGAGGCCAGGAACTGTGCAGAGATCTGTGGGGATTCTCACAACTTCCATTTCTGGTGAACAGCTGAGGTCAGAGAGGAGGCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520542.5
CDS CCA 90 bp GTTGGGGAAGACAAGCTGCTTTACTCGATAGCTCAGGACCCGATTTaGGGGGATGGTCACTTCCCTTTGGCCCTTGTGTTTATAGCTGAG +
Preference number: 5 (lower is better)
Translates to: VGEDKLLYSIAQDPI*GDGHFPLALVFIAE
Trigger: CTCAGCTATAAACACAAGGGCCAAAGGGAAGTGACCATCCCCCCAAATCGGGTCCTGAGCTATCGAGTAAAGCAGCTTGTCTTCCCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.6
ENST00000477054.6
ENST00000520542.5
CDS CCA 90 bp AAGGCCCAGAAAGGGGGCAGCATACACTCAGTCGCTCCGCAAATTTaGGTCAGACTTCTCTATCCCTTTCCAAGCTCTCTTAGGCAGTAC +
Preference number: 5 (lower is better)
Translates to: KAQKGGSIHSVAPQI*VRLLYPFPSSLRQY
Trigger: GTACTGCCTAAGAGAGCTTGGAAAGGGATAGAGAAGTCTGACCCAAATTTGCGGAGCGACTGAGTGTATGCTGCCCCCTTTCTGGGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479136.5
ENST00000519429.1
CDS CCA 90 bp GTGGTTGACTCTCAGTTCACTACCAACCTGGGAATTCTAGGTGTCTaGAAAGACAGTACCCGGGAACCACAGGCCCATCTCAAGTGGTAC +
Preference number: 5 (lower is better)
Translates to: VVDSQFTTNLGILGV*KDSTREPQAHLKWY
Trigger: GTACCACTTGAGATGGGCCTGTGGTTCCCGGGTACTGTCTTTCCAGACACCTAGAATTCCCAGGTTGGTAGTGAACTGAGAGTCAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS-3UTR CAA 90 bp GAAGAGACAGAGGTAGGCCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATTGAAACTCAGCCTTTaGACCTTGGAGCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: EETEVGPSASSSRIETTTLKLSL*TLEPRI
Trigger: GATTCTGGGCTCCAAGGTCAAAAGGCTGAGTTTCAA...TGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGGCCTACCTCTGTCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp ATCTTTTCTCTTCTCCTCTGTCAGGTCCTTGAGGACACTCTCCATGTCCTCCAATGCCGAATATCCTCCTaGCCGAGGCACTTAGCGAGG +
Preference number: 5 (lower is better)
Translates to: IFSLLLCQVLEDTLHVLQCRISS*PRHLAR
Trigger: CCTCGCTAAGTGCCTCGGCAAGGAGGATATTCGGCA...TTGGAGGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGAGAAGAGAAAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468820.1
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp TTTCTCTTCTCCTCTGTCAGGTCCTTGAGGACACTCTCCATGTCCTCCAACTTCCTGCTTAGGAGAGGCTaGTCTGGGTCCTCCATGTGT +
Preference number: 5 (lower is better)
Translates to: FLFSSVRSLRTLSMSSNFLLRRG*SGSSMC
Trigger: ACACATGGAGGACCCAGACAAGCCTCTCCTAAGCAG...GAAGTTGGAGGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGAGAAGAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp GATGGCAGTGAGGACAGACTGGTAAAGGGAAAACCCAGAGGCTTGTGGGGAGAAAGTCCAGAATGGCTTTaGCACGCGCTTCTACCAAGA +
Preference number: 5 (lower is better)
Translates to: DGSEDRLVKGKPRGLWGESPEWL*HALLPR
Trigger: TCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACT...TTCTCCCCACAAGCCTCTGGGTTTTCCCTTTACCAGTCTGTCCTCACTGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS TCA 90 bp CCACATCCTCAAAAACAGGCAGTCATAGGACTGTGCCTAGATGATTaGGGAAGAAGCCAAGGCCCAGAAAGGGGGCAGCATACACTCAGT +
Preference number: 5 (lower is better)
Translates to: PHPQKQAVIGLCLDD*GRSQGPERGQHTLS
Trigger: ACTGAGTGTATGCTGCCCCCTTTCTGGGCCTTGGCTTCTTCCTCAATCATCTAGGCACAGTCCTATGACTGCCTGTTTTTGAGGATGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000479136.5
ENST00000519429.1
CDS TCA 90 bp CTTCCCACATCCTCAAAAACAGGCAGTCATAGGACTGTGCCTAGATaGTTGAGGAAGAAGCCAAGGCCCAGAAAGGGGGCAGCATACACT +
Preference number: 5 (lower is better)
Translates to: LPTSSKTGSHRTVPR*LRKKPRPRKGAAYT
Trigger: AGTGTATGCTGCCCCCTTTCTGGGCCTTGGCTTCTTCCTCAATCATCTAGGCACAGTCCTATGACTGCCTGTTTTTGAGGATGTGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000479136.5
ENST00000519429.1
CDS GCA 90 bp AGCCTGCATCCTCACCAGCGTGTGTCAATGGGAAAGCACTGTATTTaGAGACCCTTCCCACATCCTCAAAAACAGGCAGTCATAGGACTG +
Preference number: 5 (lower is better)
Translates to: SLHPHQRVSMGKHCI*RPFPHPQKQAVIGL
Trigger: CAGTCCTATGACTGCCTGTTTTTGAGGATGTGGGAAGGGTCTGCAAATACAGTGCTTTCCCATTGACACACGCTGGTGAGGATGCAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479136.5
ENST00000519429.1
CDS GCA 90 bp TCTTCCCTTGGCTCTGATTCTTGGGCTCCCTGCCTTGCTGTATTCTaGAAGGCAATTGGATGGGTGCCTCCCTACCAACAATTTCCCAAT +
Preference number: 5 (lower is better)
Translates to: SSLGSDSWAPCLAVF*KAIGWVPPYQQFPN
Trigger: ATTGGGAAATTGTTGGTAGGGAGGCACCCATCCAATTGCCTTGCAGAATACAGCAAGGCAGGGAGCCCAAGAATCAGAGCCAAGGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS-3UTR CAA 90 bp CTTTGCTCTAGATCCTGCCGAATATCCTCCTTGCCGAGGCACTTAGCGAGGGAGGCTCCAAAATTTATATaGCCGGTCGCTTTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: LCSRSCRISSLPRHLAREAPKFI*PVAFQG
Trigger: ACCCTGAAAAGCGACCGGCAATATAAATTTTGGAGC...CTCCCTCGCTAAGTGCCTCGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000468820.1
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp ATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGGATGGTGCCGAATATCCTCCTaGCCGAGGCACTTAGCGAGG +
Preference number: 5 (lower is better)
Translates to: IKEWLAACFKEVPLVTGWCRISS*PRHLAR
Trigger: CCTCGCTAAGTGCCTCGGCAAGGAGGATATTCGGCA...CCATCCTGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp GCCAGCTCATCCCAGTTCTGCTCCATGACAGATTTCACCTGGTCCTTCAACAGAAGTCCAGAATGGCTTTaGCACGCGCTTCTACCAAGA +
Preference number: 5 (lower is better)
Translates to: ASSSQFCSMTDFTWSFNRSPEWL*HALLPR
Trigger: TCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACT...TCTGTTGAAGGACCAGGTGAAATCTGTCATGGAGCAGAACTGGGATGAGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS TCA 90 bp CATCTAACCACTTGTCCCCATCTGTGTCCAGAATGTCCATCAGGGTaGGGCCTGTTGTGTAGTGCCGGCATCCAAAGAAAGTTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: HLTTCPHLCPECPSG*GLLCSAGIQRKFSS
Trigger: AGAAGAGAACTTTCTTTGGATGCCGGCACTACACAACAGGCCTCACCCTGATGGACATTCTGGACACAGATGGGGACAAGTGGTTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.6
ENST00000477054.6
ENST00000520542.5
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS TCA 90 bp ACCAACTCCTCTCTGACCTCAGCTGTTCACCAGAAATGGAAGTTGTaGGAATCCCCACAGATCTCTGCACAGTTCCTGGCCTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: TNSSLTSAVHQKWKL*ESPQISAQFLASES
Trigger: AGATTCAGAGGCCAGGAACTGTGCAGAGATCTGTGGGGATTCTCACAACTTCCATTTCTGGTGAACAGCTGAGGTCAGAGAGGAGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418519.6
CDS TCA 90 bp GAATCTTCAGATCACCTCCAGTCCCCTGCAGACTTCTCTTCCCAGTaGTGGAAGTTTTTACTCTTGCAATCTGAGCCCTCACTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: ESSDHLQSPADFSSQ*WKFLLLQSEPSLLV
Trigger: CACCAGCAGTGAGGGCTCAGATTGCAAGAGTAAAAACTTCCATCACTGGGAAGAGAAGTCTGCAGGGGACTGGAGGTGATCTGAAGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479136.5
ENST00000519429.1
CDS CCA 90 bp TGGGTGCCTCCCTACCAACAATTTCCCAATGAGGTGGTGGTAAATTaGCCTCAGAAGAAACAAAAGCTTCCTGGGATCCACTTCCCCATC +
Preference number: 5 (lower is better)
Translates to: WVPPYQQFPNEVVVN*PQKKQKLPGIHFPI
Trigger: GATGGGGAAGTGGATCCCAGGAAGCTTTTGTTTCTTCTGAGGCCAATTTACCACCACCTCATTGGGAAATTGTTGGTAGGGAGGCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CCA 90 bp GATTCTTGGGCTCCCTGCCTTGCTGTATTCTGCAAGGCAATTGGATaGGTGCCTCCCTACCAACAATTTCCCAATGAGGTGGTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: DSWAPCLAVFCKAIG*VPPYQQFPNEVVVN
Trigger: ATTTACCACCACCTCATTGGGAAATTGTTGGTAGGGAGGCACCCATCCAATTGCCTTGCAGAATACAGCAAGGCAGGGAGCCCAAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS-3UTR CAA 90 bp GAATTCGTGCCTCAGGGTCATAGTCCATGTCAGGAGGACTGCTGGCCAGCTCATCTATCAACTCTCCCGTaGAGTCTACATTATCCAGAA +
Preference number: 5 (lower is better)
Translates to: EFVPQGHSPCQEDCWPAHLSTLP*SLHYPE
Trigger: TTCTGGATAATGTAGACTCAACGGGAGAGTTGATAG...ATGAGCTGGCCAGCAGTCCTCCTGACATGGACTATGACCCTGAGGCACGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp GAAGAGACAGAGGTAGGCCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACACTATCAACTCTCCCGTaGAGTCTACATTATCCAGAA +
Preference number: 5 (lower is better)
Translates to: EETEVGPSASSSRIETTTLSTLP*SLHYPE
Trigger: TTCTGGATAATGTAGACTCAACGGGAGAGTTGATAG...TGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGGCCTACCTCTGTCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp GAGACAGAGGTAGGCCCCTCAGCCAGCTCCAGCAGGATAGAGACAACAACATACCTATCAACTCTCCCGTaGAGTCTACATTATCCAGAA +
Preference number: 5 (lower is better)
Translates to: ETEVGPSASSSRIETTTYLSTLP*SLHYPE
Trigger: TTCTGGATAATGTAGACTCAACGGGAGAGTTGATAG...GTATGTTGTTGTCTCTATCCTGCTGGAGCTGGCTGAGGGGCCTACCTCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp TTTCACCTGGTCCTTCAACAGAGGAAGGGTCCCCTTCTCCAGGGCCTCAGCCACGGAAACTGCCTGAAATaGTTATTTCTTTGGGTAATC +
Preference number: 5 (lower is better)
Translates to: FHLVLQQRKGPLLQGLSHGNCLK*LFLWVI
Trigger: GATTACCCAAAGAAATAACAATTTCAGGCAGTTTCC...GTGGCTGAGGCCCTGGAGAAGGGGACCCTTCCTCTGTTGAAGGACCAGGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp GATGGCAGTGAGGACAGACTGGTAAAGGGAAAACCCAGAGGCTTGTGGGGAGAAGCTCCAAAATTTATATaGCCGGTCGCTTTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: DGSEDRLVKGKPRGLWGEAPKFI*PVAFQG
Trigger: ACCCTGAAAAGCGACCGGCAATATAAATTTTGGAGC...TTCTCCCCACAAGCCTCTGGGTTTTCCCTTTACCAGTCTGTCCTCACTGCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp TGCTCCATGACAGATTTCACCTGGTCCTTCAACAGAGGAAGGGTCCCCTTCTCCGCTCCAAAATTTATATaGCCGGTCGCTTTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: CSMTDFTWSFNRGRVPFSAPKFI*PVAFQG
Trigger: ACCCTGAAAAGCGACCGGCAATATAAATTTTGGAGC...GGAGAAGGGGACCCTTCCTCTGTTGAAGGACCAGGTGAAATCTGTCATGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp GAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCATGCCGAATATCCTCCTaGCCGAGGCACTTAGCGAGG +
Preference number: 5 (lower is better)
Translates to: ERMGYIKEWLAACFKEVPCRISS*PRHLAR
Trigger: CCTCGCTAAGTGCCTCGGCAAGGAGGATATTCGGCA...TGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp ATGTGTAGCTCCCCGGAAATCAGGACCTCAGATACTCTTTGCTCTAGATCCTGCAGTCCAGAATGGCTTTaGCACGCGCTTCTACCAAGA +
Preference number: 5 (lower is better)
Translates to: MCSSPEIRTSDTLCSRSCSPEWL*HALLPR
Trigger: TCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACT...GCAGGATCTAGAGCAAAGAGTATCTGAGGTCCTGATTTCCGGGGAGCTACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS TCA 90 bp TCTGGAATCCTCCGAACCCAAAGACTTTCCTGTAGAGGCAGCAATTaGGAACCTGGGCCACCCAGCCCAAAAGGTTTTATTTCTAAGGCT +
Preference number: 5 (lower is better)
Translates to: SGILRTQRLSCRGSN*EPGPPSPKGFISKA
Trigger: AGCCTTAGAAATAAAACCTTTTGGGCTGGGTGGCCCAGGTTCTCAATTGCTGCCTCTACAGGAAAGTCTTTGGGTTCGGAGGATTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477054.6
ENST00000479136.5
CDS-3UTR CAA 90 bp GCAGGGCATCCAGGAAGTCCAGAATGGCTTTTGCACGCGCTTCTACCAAGACCCTACATTATCCAGAATTaGAAACTCAGCCTTTTGACC +
Preference number: 5 (lower is better)
Translates to: AGHPGSPEWLLHALLPRPYIIQN*KLSLLT
Trigger: GGTCAAAAGGCTGAGTTTCAAATTCTGGATAATGTA...GGGTCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACTTCCTGGATGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp GGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACATCCTCTGTCAGGTCCTaGAGGACACTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: GYIKEWLAACFKEVPLVTSSVRS*RTLSMS
Trigger: GGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGA...TGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp ATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCTGCCGAATATCCTCCTaGCCGAGGCACTTAGCGAGG +
Preference number: 5 (lower is better)
Translates to: MERMGYIKEWLAACFKEVCRISS*PRHLAR
Trigger: CCTCGCTAAGTGCCTCGGCAAGGAGGATATTCGGCA...GACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp AGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACCTGCTTAGGAGAGGCTaGTCTGGGTCCTCCATGTGT +
Preference number: 5 (lower is better)
Translates to: SEWDTSKNGWLLVLKRSHLLRRG*SGSSMC
Trigger: ACACATGGAGGACCCAGACAAGCCTCTCCTAAGCAG...GTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp GAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGCTTAGGAGAGGCTaGTCTGGGTCCTCCATGTGT +
Preference number: 5 (lower is better)
Translates to: ERMGYIKEWLAACFKEVPLLRRG*SGSSMC
Trigger: ACACATGGAGGACCCAGACAAGCCTCTCCTAAGCAG...TGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp TGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCTGCTTAGGAGAGGCTaGTCTGGGTCCTCCATGTGT +
Preference number: 5 (lower is better)
Translates to: WSEWDTSKNGWLLVLKRSLLRRG*SGSSMC
Trigger: ACACATGGAGGACCCAGACAAGCCTCTCCTAAGCAG...GGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp GGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACACTCAGCCTTTTGACCTaGGAGCCCAGAATCCAGTTC +
Preference number: 5 (lower is better)
Translates to: GYIKEWLAACFKEVPLVTLSLLT*EPRIQF
Trigger: GAACTGGATTCTGGGCTCCAAGGTCAAAAGGCTGAG...TGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp ATCTTTTCTCTTCTCCTCTGTCAGGTCCTTGAGGACACTCTCCATGTCCTCCAATTGAAACTCAGCCTTTaGACCTTGGAGCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: IFSLLLCQVLEDTLHVLQLKLSL*TLEPRI
Trigger: GATTCTGGGCTCCAAGGTCAAAAGGCTGAGTTTCAA...TTGGAGGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGAGAAGAGAAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp CTTTGCTCTAGATCCTGCCGAATATCCTCCTTGCCGAGGCACTTAGCGAGGGAGTACATTATCCAGAATTaGAAACTCAGCCTTTTGACC +
Preference number: 5 (lower is better)
Translates to: LCSRSCRISSLPRHLAREYIIQN*KLSLLT
Trigger: GGTCAAAAGGCTGAGTTTCAAATTCTGGATAATGTA...CTCCCTCGCTAAGTGCCTCGGCAAGGAGGATATTCGGCAGGATCTAGAGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp GGCTTGTCTGGGTCCTCCATGTGTAGCTCCCCGGAAATCAGGACCTCAGATACTTACATTATCCAGAATTaGAAACTCAGCCTTTTGACC +
Preference number: 5 (lower is better)
Translates to: GLSGSSMCSSPEIRTSDTYIIQN*KLSLLT
Trigger: GGTCAAAAGGCTGAGTTTCAAATTCTGGATAATGTA...AGTATCTGAGGTCCTGATTTCCGGGGAGCTACACATGGAGGACCCAGACAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp AACATGCACAACCTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGTCCTCTGTCAGGTCCTaGAGGACACTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: NMHNLPLLIRSPCMKSRLSSVRS*RTLSMS
Trigger: GGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGA...CAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAGGTTGTGCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp ATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCTCCTCTGTCAGGTCCTaGAGGACACTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: MERMGYIKEWLAACFKEVSSVRS*RTLSMS
Trigger: GGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGA...GACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp GTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTCCTCTGTCAGGTCCTaGAGGACACTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: VLDVNMERMGYIKEWLAASSVRS*RTLSMS
Trigger: GGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGA...AGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp CTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTCTGCTTAGGAGAGGCTaGTCTGGGTCCTCCATGTGT +
Preference number: 5 (lower is better)
Translates to: LVLDVNMERMGYIKEWLALLRRG*SGSSMC
Trigger: ACACATGGAGGACCCAGACAAGCCTCTCCTAAGCAG...AGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp ATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGGATGGAGTTCATCTAACCACTaGTCCCCATCTGTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: IKEWLAACFKEVPLVTGWSSSNH*SPSVSR
Trigger: TCTGGACACAGATGGGGACAAGTGGTTAGATGAACT...CCATCCTGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp TGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTCTCAGCCTTTTGACCTaGGAGCCCAGAATCCAGTTC +
Preference number: 5 (lower is better)
Translates to: WMLTWSEWDTSKNGWLLVLSLLT*EPRIQF
Trigger: GAACTGGATTCTGGGCTCCAAGGTCAAAAGGCTGAG...AACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp AACATGCACAACCTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGCTCAGCCTTTTGACCTaGGAGCCCAGAATCCAGTTC +
Preference number: 5 (lower is better)
Translates to: NMHNLPLLIRSPCMKSRLLSLLT*EPRIQF
Trigger: GAACTGGATTCTGGGCTCCAAGGTCAAAAGGCTGAG...CAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAGGTTGTGCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp ACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGCTCAGCCTTTTGACCTaGGAGCCCAGAATCCAGTTC +
Preference number: 5 (lower is better)
Translates to: TWSEWDTSKNGWLLVLKRLSLLT*EPRIQF
Trigger: GAACTGGATTCTGGGCTCCAAGGTCAAAAGGCTGAG...CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp ATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCTCAGCCTTTTGACCTaGGAGCCCAGAATCCAGTTC +
Preference number: 5 (lower is better)
Translates to: MERMGYIKEWLAACFKEVLSLLT*EPRIQF
Trigger: GAACTGGATTCTGGGCTCCAAGGTCAAAAGGCTGAG...GACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp AAGACCCCAGCAGCATTAAAAAGGCTGCTTAGGAGAGGCTTGTCTGGGTCCTCCGGAAACTGCCTGAAATaGTTATTTCTTTGGGTAATC +
Preference number: 5 (lower is better)
Translates to: KTPAALKRLLRRGLSGSSGNCLK*LFLWVI
Trigger: GATTACCCAAAGAAATAACAATTTCAGGCAGTTTCC...GGAGGACCCAGACAAGCCTCTCCTAAGCAGCCTTTTTAATGCTGCTGGGGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp AGAGACAACAACATACAGCGCACAGAGAATTCGTGCCTCAGGGTCATAGTCCATGCTCCAAAATTTATATaGCCGGTCGCTTTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: RDNNIQRTENSCLRVIVHAPKFI*PVAFQG
Trigger: ACCCTGAAAAGCGACCGGCAATATAAATTTTGGAGC...ATGGACTATGACCCTGAGGCACGAATTCTCTGTGCGCTGTATGTTGTTGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp TCCAGGCTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTCTTCATCGTCTCCTaGTTGGGGAAGACAAGCTGC +
Preference number: 5 (lower is better)
Translates to: SRLVLDVNMERMGYIKEWFFIVS*LGKTSC
Trigger: GCAGCTTGTCTTCCCCAACAAGGAGACGATGAAGAA...CCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAGCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309481.11
ENST00000394179.5
CDS-3UTR CAA 90 bp GAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCATTCTTCATCGTCTCCTaGTTGGGGAAGACAAGCTGC +
Preference number: 5 (lower is better)
Translates to: ERMGYIKEWLAACFKEVPFFIVS*LGKTSC
Trigger: GCAGCTTGTCTTCCCCAACAAGGAGACGATGAAGAA...TGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309481.11
ENST00000394179.5
CDS-3UTR CAA 90 bp TTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTTCCTCTGTCAGGTCCTaGAGGACACTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: FWMLTWSEWDTSKNGWLLSSVRS*RTLSMS
Trigger: GGACATGGAGAGTGTCCTCAAGGACCTGACAGAGGA...AAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp CTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGGTTTTGGATGTTCTGCTTAGGAGAGGCTaGTCTGGGTCCTCCATGTGT +
Preference number: 5 (lower is better)
Translates to: LPLLIRSPCMKSRLVLDVLLRRG*SGSSMC
Trigger: ACACATGGAGGACCCAGACAAGCCTCTCCTAAGCAG...AACATCCAAAACCAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp GGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAAGTCCAGAATGGCTTTaGCACGCGCTTCTACCAAGA +
Preference number: 5 (lower is better)
Translates to: GYIKEWLAACFKEVPLVTSPEWL*HALLPR
Trigger: TCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACT...TGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp TGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTGGAAAACCCAGAGGCTaGTGGGGAGAAAGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: WMLTWSEWDTSKNGWLLVGKPRG*WGERAF
Trigger: AAAAGCCCTTTCTCCCCACAAGCCTCTGGGTTTTCC...AACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp CTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGGAAAACCCAGAGGCTaGTGGGGAGAAAGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: LVLDVNMERMGYIKEWLAGKPRG*WGERAF
Trigger: AAAAGCCCTTTCTCCCCACAAGCCTCTGGGTTTTCC...AGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp GAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCATTGAAACTCAGCCTTTaGACCTTGGAGCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: ERMGYIKEWLAACFKEVPLKLSL*TLEPRI
Trigger: GATTCTGGGCTCCAAGGTCAAAAGGCTGAGTTTCAA...TGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp AGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTTGAAACTCAGCCTTTaGACCTTGGAGCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: SEWDTSKNGWLLVLKRSHLKLSL*TLEPRI
Trigger: GATTCTGGGCTCCAAGGTCAAAAGGCTGAGTTTCAA...GTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp TCCAGGCTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGAAACTCAGCCTTTaGACCTTGGAGCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: SRLVLDVNMERMGYIKEWLKLSL*TLEPRI
Trigger: GATTCTGGGCTCCAAGGTCAAAAGGCTGAGTTTCAA...CCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAGCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp ATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGTTGAAACTCAGCCTTTaGACCTTGGAGCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: MGYIKEWLAACFKEVPLVLKLSL*TLEPRI
Trigger: GATTCTGGGCTCCAAGGTCAAAAGGCTGAGTTTCAA...CACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp CTCCAGCAGGATAGAGACAACAACATACAGCGCACAGAGAATTCGTGCCTCAGGGGAAACTGCCTGAAATaGTTATTTCTTTGGGTAATC +
Preference number: 5 (lower is better)
Translates to: LQQDRDNNIQRTENSCLRGNCLK*LFLWVI
Trigger: GATTACCCAAAGAAATAACAATTTCAGGCAGTTTCC...CCTGAGGCACGAATTCTCTGTGCGCTGTATGTTGTTGTCTCTATCCTGCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS-3UTR CAA 90 bp ATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGGATGGGCTCCAAAATTTATATaGCCGGTCGCTTTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: IKEWLAACFKEVPLVTGWAPKFI*PVAFQG
Trigger: ACCCTGAAAAGCGACCGGCAATATAAATTTTGGAGC...CCATCCTGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp AGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACGATGGTCACTTCCCTTaGGCCCTTGTGTTTATAGCT +
Preference number: 5 (lower is better)
Translates to: SEWDTSKNGWLLVLKRSHDGHFP*ALVFIA
Trigger: AGCTATAAACACAAGGGCCAAAGGGAAGTGACCATC...GTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp ATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGGATGGTCACTTCCCTTaGGCCCTTGTGTTTATAGCT +
Preference number: 5 (lower is better)
Translates to: MGYIKEWLAACFKEVPLVDGHFP*ALVFIA
Trigger: AGCTATAAACACAAGGGCCAAAGGGAAGTGACCATC...CACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp GGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGATGGTCACTTCCCTTaGGCCCTTGTGTTTATAGCT +
Preference number: 5 (lower is better)
Translates to: GYIKEWLAACFKEVPLVTDGHFP*ALVFIA
Trigger: AGCTATAAACACAAGGGCCAAAGGGAAGTGACCATC...TGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp TGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTAGTCCAGAATGGCTTTaGCACGCGCTTCTACCAAGA +
Preference number: 5 (lower is better)
Translates to: WMLTWSEWDTSKNGWLLVSPEWL*HALLPR
Trigger: TCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACT...AACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp GTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTAGTCCAGAATGGCTTTaGCACGCGCTTCTACCAAGA +
Preference number: 5 (lower is better)
Translates to: VLDVNMERMGYIKEWLAASPEWL*HALLPR
Trigger: TCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACT...AGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp ACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGAGTCCAGAATGGCTTTaGCACGCGCTTCTACCAAGA +
Preference number: 5 (lower is better)
Translates to: TWSEWDTSKNGWLLVLKRSPEWL*HALLPR
Trigger: TCTTGGTAGAAGCGCGTGCAAAAGCCATTCTGGACT...CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp TGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCATATTCATCGTCTCCTaGTTGGGGAAGACAAGCTGC +
Preference number: 5 (lower is better)
Translates to: WSEWDTSKNGWLLVLKRSIFIVS*LGKTSC
Trigger: GCAGCTTGTCTTCCCCAACAAGGAGACGATGAATAT...GGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360317.7
ENST00000520542.5
CDS TCA 90 bp CCACCCAGCCCAAAAGGTTTTATTTCTAAGGCTCTGTTATTTGTCTaGCTGTCTTCTGGAGACCACCTCTTTGTATCTTCCCTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: PPSPKGFISKALLFV*LSSGDHLFVSSLLP
Trigger: TGGAAGAAGGGAAGATACAAAGAGGTGGTCTCCAGAAGACAGTCAGACAAATAACAGAGCCTTAGAAATAAAACCTTTTGGGCTGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477054.6
ENST00000479136.5
CDS GCA 90 bp GAGAGGAAGAGTTATTTCAGAATCTTCAGATCACCTCCAGTCCCCTaGAGACTTCTCTTCCCAGTGATGGAAGTTTTTACTCTTGCAATC +
Preference number: 5 (lower is better)
Translates to: ERKSYFRIFRSPPVP*RLLFPVMEVFTLAI
Trigger: GATTGCAAGAGTAAAAACTTCCATCACTGGGAAGAGAAGTCTGCAGGGGACTGGAGGTGATCTGAAGATTCTGAAATAACTCTTCCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479136.5
ENST00000519429.1
CDS-3UTR CAA 90 bp AACATGCACAACCTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGAGTTCATCTAACCACTaGTCCCCATCTGTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: NMHNLPLLIRSPCMKSRLSSSNH*SPSVSR
Trigger: TCTGGACACAGATGGGGACAAGTGGTTAGATGAACT...CAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAGGTTGTGCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp ATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCAGTTCATCTAACCACTaGTCCCCATCTGTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: MERMGYIKEWLAACFKEVSSSNH*SPSVSR
Trigger: TCTGGACACAGATGGGGACAAGTGGTTAGATGAACT...GACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp TGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTGAAACTCAGCCTTTaGACCTTGGAGCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: WMLTWSEWDTSKNGWLLVLKLSL*TLEPRI
Trigger: GATTCTGGGCTCCAAGGTCAAAAGGCTGAGTTTCAA...AACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp ATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGGATGGCTATCAACTCTCCCGTaGAGTCTACATTATCCAGAA +
Preference number: 5 (lower is better)
Translates to: IKEWLAACFKEVPLVTGWLSTLP*SLHYPE
Trigger: TTCTGGATAATGTAGACTCAACGGGAGAGTTGATAG...CCATCCTGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp CTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGATGGTCACTTCCCTTaGGCCCTTGTGTTTATAGCT +
Preference number: 5 (lower is better)
Translates to: LVLDVNMERMGYIKEWLADGHFP*ALVFIA
Trigger: AGCTATAAACACAAGGGCCAAAGGGAAGTGACCATC...AGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp ATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCATATTCATCGTCTCCTaGTTGGGGAAGACAAGCTGC +
Preference number: 5 (lower is better)
Translates to: MERMGYIKEWLAACFKEVIFIVS*LGKTSC
Trigger: GCAGCTTGTCTTCCCCAACAAGGAGACGATGAATAT...GACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360317.7
ENST00000520542.5
CDS-3UTR CAA 90 bp TTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTAGTTCATCTAACCACTaGTCCCCATCTGTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: FWMLTWSEWDTSKNGWLLSSSNH*SPSVSR
Trigger: TCTGGACACAGATGGGGACAAGTGGTTAGATGAACT...AAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp GAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTATCAACTCTCCCGTaGAGTCTACATTATCCAGAA +
Preference number: 5 (lower is better)
Translates to: ERMGYIKEWLAACFKEVPLSTLP*SLHYPE
Trigger: TTCTGGATAATGTAGACTCAACGGGAGAGTTGATAG...TGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp ACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGGCTCCAAAATTTATATaGCCGGTCGCTTTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: TWSEWDTSKNGWLLVLKRAPKFI*PVAFQG
Trigger: ACCCTGAAAAGCGACCGGCAATATAAATTTTGGAGC...CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp GTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTGCTCCAAAATTTATATaGCCGGTCGCTTTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: VLDVNMERMGYIKEWLAAAPKFI*PVAFQG
Trigger: ACCCTGAAAAGCGACCGGCAATATAAATTTTGGAGC...AGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp TTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGATGGTCACTTCCCTTaGGCCCTTGTGTTTATAGCT +
Preference number: 5 (lower is better)
Translates to: FWMLTWSEWDTSKNGWLLDGHFP*ALVFIA
Trigger: AGCTATAAACACAAGGGCCAAAGGGAAGTGACCATC...AAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS CCA 90 bp AACTACAATTCTTGTGATTTCCTCAAATACGCTGAACATTGCGCCTaGACCAACTCAGAAACAGAAGCCAATTTCAGTTTTTGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: NYNSCDFLKYAEHCA*TNSETEANFSFWEE
Trigger: CTCCTCCCAAAAACTGAAATTGGCTTCTGTTTCTGAGTTGGTCCAGGCGCAATGTTCAGCGTATTTGAGGAAATCACAAGAATTGTAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394175.6
ENST00000477054.6
CDS-3UTR CAA 90 bp ATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGGATGGGGAAACTGCCTGAAATaGTTATTTCTTTGGGTAATC +
Preference number: 5 (lower is better)
Translates to: IKEWLAACFKEVPLVTGWGNCLK*LFLWVI
Trigger: GATTACCCAAAGAAATAACAATTTCAGGCAGTTTCC...CCATCCTGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp ATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACAGGATGGTACATCAAAGAATGGTaGGCTGCTTGTTTTAAAGAG +
Preference number: 5 (lower is better)
Translates to: IKEWLAACFKEVPLVTGWYIKEW*AACFKE
Trigger: CTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTA...CCATCCTGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS GCA 90 bp CTCCTTAACTACAATTCTTGTGATTTCCTCAAATACGCTGAACATTaGGCCTGGACCAACTCAGAAACAGAAGCCAATTTCAGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: LLNYNSCDFLKYAEH*AWTNSETEANFSFW
Trigger: CCAAAAACTGAAATTGGCTTCTGTTTCTGAGTTGGTCCAGGCGCAATGTTCAGCGTATTTGAGGAAATCACAAGAATTGTAGTTAAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394175.6
ENST00000477054.6
CDS-3UTR CAA 90 bp TGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCTACATTATCCAGAATTaGAAACTCAGCCTTTTGACC +
Preference number: 5 (lower is better)
Translates to: WSEWDTSKNGWLLVLKRSYIIQN*KLSLLT
Trigger: GGTCAAAAGGCTGAGTTTCAAATTCTGGATAATGTA...GGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp CTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGGTTTTGGATGTTCTATCAACTCTCCCGTaGAGTCTACATTATCCAGAA +
Preference number: 5 (lower is better)
Translates to: LPLLIRSPCMKSRLVLDVLSTLP*SLHYPE
Trigger: TTCTGGATAATGTAGACTCAACGGGAGAGTTGATAG...AACATCCAAAACCAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp TTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTCTATCAACTCTCCCGTaGAGTCTACATTATCCAGAA +
Preference number: 5 (lower is better)
Translates to: FWMLTWSEWDTSKNGWLLLSTLP*SLHYPE
Trigger: TTCTGGATAATGTAGACTCAACGGGAGAGTTGATAG...AAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp ATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGTACATCAAAGAATGGTaGGCTGCTTGTTTTAAAGAG +
Preference number: 5 (lower is better)
Translates to: MGYIKEWLAACFKEVPLVYIKEW*AACFKE
Trigger: CTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTA...CACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp GAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCATACATCAAAGAATGGTaGGCTGCTTGTTTTAAAGAG +
Preference number: 5 (lower is better)
Translates to: ERMGYIKEWLAACFKEVPYIKEW*AACFKE
Trigger: CTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTA...TGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp GGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTCCCACTGGTGACATACATCAAAGAATGGTaGGCTGCTTGTTTTAAAGAG +
Preference number: 5 (lower is better)
Translates to: GYIKEWLAACFKEVPLVTYIKEW*AACFKE
Trigger: CTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTA...TGTCACCAGTGGGACCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp CTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTTACATTATCCAGAATTaGAAACTCAGCCTTTTGACC +
Preference number: 5 (lower is better)
Translates to: LVLDVNMERMGYIKEWLAYIIQN*KLSLLT
Trigger: GGTCAAAAGGCTGAGTTTCAAATTCTGGATAATGTA...AGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp TGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTGGAAACTGCCTGAAATaGTTATTTCTTTGGGTAATC +
Preference number: 5 (lower is better)
Translates to: WMLTWSEWDTSKNGWLLVGNCLK*LFLWVI
Trigger: GATTACCCAAAGAAATAACAATTTCAGGCAGTTTCC...AACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp CTGGTTTTGGATGTTAACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGGAAACTGCCTGAAATaGTTATTTCTTTGGGTAATC +
Preference number: 5 (lower is better)
Translates to: LVLDVNMERMGYIKEWLAGNCLK*LFLWVI
Trigger: GATTACCCAAAGAAATAACAATTTCAGGCAGTTTCC...AGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGTTAACATCCAAAACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp ACATGGAGCGAATGGGATACATCAAAGAATGGTTGGCTGCTTGTTTTAAAGAGGTACATCAAAGAATGGTaGGCTGCTTGTTTTAAAGAG +
Preference number: 5 (lower is better)
Translates to: TWSEWDTSKNGWLLVLKRYIKEW*AACFKE
Trigger: CTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTA...CCTCTTTAAAACAAGCAGCCAACCATTCTTTGATGTATCCCATTCGCTCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp CTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGGTTTTGGATGTTTACATTATCCAGAATTaGAAACTCAGCCTTTTGACC +
Preference number: 5 (lower is better)
Translates to: LPLLIRSPCMKSRLVLDVYIIQN*KLSLLT
Trigger: GGTCAAAAGGCTGAGTTTCAAATTCTGGATAATGTA...AACATCCAAAACCAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS-3UTR CAA 90 bp CTGCCACTTTTAATCAGAAGTCCATGTATGAAATCCAGGCTGGTTTTGGATGTTGGAAACTGCCTGAAATaGTTATTTCTTTGGGTAATC +
Preference number: 5 (lower is better)
Translates to: LPLLIRSPCMKSRLVLDVGNCLK*LFLWVI
Trigger: GATTACCCAAAGAAATAACAATTTCAGGCAGTTTCC...AACATCCAAAACCAGCCTGGATTTCATACATGGACTTCTGATTAAAAGTGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000520542.5
CDS CCA 72 bp CAAGGGAAGGACTGGGCAATGCCACCCACCCTTTCTTaGGGCAAGGTGGCCAAGAGCAGCAGGGCTGCTCGG +
Preference number: 6 (lower is better)
Translates to: QGKDWAMPPTLS*GKVAKSSRAAR
Trigger: CCGAGCAGCCCTGCTGCTCTTGGCCACCTTGCCCCAAGAAAGGGTGGGTGGCATTGCCCAGTCCTTCCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464556.1
CDS CAA 90 bp GCTGCTCGGAGAGGAGTGAAGGAAGAGTCTAAGGCTGGCATCGCCTaGACCTGCGGGGTGTGGGCCAACACTGGCCTCCACAGTCCCTGC +
Preference number: 6 (lower is better)
Translates to: AARRGVKEESKAGIA*TCGVWANTGLHSPC
Trigger: GCAGGGACTGTGGAGGCCAGTGTTGGCCCACACCCCGCAGGTCAAGGCGATGCCAGCCTTAGACTCTTCCTTCACTCCTCTCCGAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464556.1
CDS GCA 72 bp CCAAGGGGCCCAAGGGATGGAAAGGCAGGCCCACCATaGCCCAGCCAGACTAGCCCCAACGTTGATGAACAG +
Preference number: 6 (lower is better)
Translates to: PRGPRDGKAGPP*PSQTSPNVDEQ
Trigger: CTGTTCATCAACGTTGGGGCTAGTCTGGCTGGGGCATGGTGGGCCTGCCTTTCCATCCCTTGGGCCCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CAA 72 bp ACAAGGGAAGGACTGGGCAATGCCACCCACCCTTTCTaGGGGCAAGGTGGCCAAGAGCAGCAGGGCTGCTCG +
Preference number: 6 (lower is better)
Translates to: TREGLGNATHPF*GQGGQEQQGCS
Trigger: CGAGCAGCCCTGCTGCTCTTGGCCACCTTGCCCCAAGAAAGGGTGGGTGGCATTGCCCAGTCCTTCCCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464556.1
CDS CAA 72 bp AGAGGAGTGAAGGAAGAGTCTAAGGCTGGCATCGCCTaGACCTGCGGGGTGTGGGCCAACACTGGCCTCCAC +
Preference number: 6 (lower is better)
Translates to: RGVKEESKAGIA*TCGVWANTGLH
Trigger: GTGGAGGCCAGTGTTGGCCCACACCCCGCAGGTCAAGGCGATGCCAGCCTTAGACTCTTCCTTCACTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464556.1
CDS CCA 72 bp CTGAAAGTTGTCCAGGTGTGGAACTTCCTGGACGGGTaGGTAGGGCTGGGTGCCCCACCTCCCAAGCCTTTA +
Preference number: 6 (lower is better)
Translates to: LKVVQVWNFLDG*VGLGAPPPKPL
Trigger: TAAAGGCTTGGGAGGTGGGGCACCCAGCCCTACCCACCCGTCCAGGAAGTTCCACACCTGGACAACTTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CCA 72 bp AGCAGCAGTCTTGAGCCACATGGACTCAGGGTGGGTTaGTGCAGCCACCCTGAACACACTTGGCTATCACCC +
Preference number: 6 (lower is better)
Translates to: SSSLEPHGLRVG*CSHPEHTWLSP
Trigger: GGGTGATAGCCAAGTGTGTTCAGGGTGGCTGCACCAACCCACCCTGAGTCCATGTGGCTCAAGACTGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477054.6
ENST00000479136.5
CDS TCA 72 bp GAACCAGCTGCCCAAATGCCATGCGACGGTCAACACTaGAGACCCAGGACAACAGCAGCTAACACCTGGAGG +
Preference number: 6 (lower is better)
Translates to: EPAAQMPCDGQH*RPRTTAANTWR
Trigger: CCTCCAGGTGTTAGCTGCTGTTGTCCTGGGTCTTCAGTGTTGACCGTCGCATGGCATTTGGGCAGCTGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS TCA 72 bp AAGGAGTGGGTAGGAGATCCTGGTATGTATTCTAGGTaGGTGTGGGCCAGACAATGGTGCACACCGTGGCGC +
Preference number: 6 (lower is better)
Translates to: KEWVGDPGMYSR*VWARQWCTPWR
Trigger: GCGCCACGGTGTGCACCATTGTCTGGCCCACACTCACCTAGAATACATACCAGGATCTCCTACCCACTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS GCA 72 bp AGCAGTCTTGAGCCACATGGACTCAGGGTGGGTTGGTaGAGCCACCCTGAACACACTTGGCTATCACCCTTA +
Preference number: 6 (lower is better)
Translates to: SSLEPHGLRVGW*SHPEHTWLSPL
Trigger: TAAGGGTGATAGCCAAGTGTGTTCAGGGTGGCTGCACCAACCCACCCTGAGTCCATGTGGCTCAAGACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477054.6
ENST00000479136.5
CDS CCA 72 bp AGTGTGGGCCAGACAATGGTGCACACCGTGGCGCCCTaGGCCATGCAATCCAGTGTGTTTGGAATAGAGAAA +
Preference number: 6 (lower is better)
Translates to: SVGQTMVHTVAP*AMQSSVFGIEK
Trigger: TTTCTCTATTCCAAACACACTGGATTGCATGGCCCAGGGCGCCACGGTGTGCACCATTGTCTGGCCCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS TCA 72 bp GCCCCAACGTTGATGAACAGAGGAACCAGGGAGGAATaGCGGGCACGGTTGCCAGACTTCACATTACTAACC +
Preference number: 6 (lower is better)
Translates to: APTLMNRGTREE*RARLPDFTLLT
Trigger: GGTTAGTAATGTGAAGTCTGGCAACCGTGCCCGTCATTCCTCCCTGGTTCCTCTGTTCATCAACGTTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS TCA 72 bp AGCCCGTTTCGTGGACTCTCTTCACATGGACGCACGTaGCATGAGGTCAAGGAAGAGCCAAAGGTTCCAGGA +
Preference number: 6 (lower is better)
Translates to: SPFRGLSSHGRT*HEVKEEPKVPG
Trigger: TCCTGGAACCTTTGGCTCTTCCTTGACCTCATGTCACGTGCGTCCATGTGAAGAGAGTCCACGAAACGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS GCA 72 bp CCCCATCTCGTGCTCCCGTGTACACTCTCAAGGAGATaGTGGTCTTCCTTATCTGGATGCCATCTGGCTTCT +
Preference number: 6 (lower is better)
Translates to: PHLVLPCTLSRR*WSSLSGCHLAS
Trigger: AGAAGCCAGATGGCATCCAGATAAGGAAGACCAGCATCTCCTTGAGAGTGTACACGGGAGCACGAGATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS GCA 72 bp ATGAGGACCATAACCCAGCAGAACCAGCTGCCCAAATaGCATGCGACGGTCAACACTGAAGACCCAGGACAA +
Preference number: 6 (lower is better)
Translates to: MRTITQQNQLPK*HATVNTEDPGQ
Trigger: TTGTCCTGGGTCTTCAGTGTTGACCGTCGCATGGCATTTGGGCAGCTGGTTCTGCTGGGTTATGGTCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS GCA 72 bp CATCCTACCTTTGGCCACCTTCCCCTATATCCCTTCTaGCCAGCACAGGCACTTATCCACTCACTGCTTCCT +
Preference number: 6 (lower is better)
Translates to: HPTFGHLPLYPF*PAQALIHSLLP
Trigger: AGGAAGCAGTGAGTGGATAAGTGCCTGTGCTGGGCAGAAGGGATATAGGGGAAGGTGGCCAAAGGTAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CAA 90 bp GCTCTGATTCTTGGGCTCCCTGCCTTGCTGTATTCTGCAAGGCAATaGGATGGGTGCCTCCCTACCAACAATTTCCCAATGAGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: ALILGLPALLYSARQ*DGCLPTNNFPMRWW
Trigger: CCACCACCTCATTGGGAAATTGTTGGTAGGGAGGCACCCATCCAATTGCCTTGCAGAATACAGCAAGGCAGGGAGCCCAAGAATCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CAA 90 bp AACTGGTCGTTTCTTCCCTTGGCTCTGATTCTTGGGCTCCCTGCCTaGCTGTATTCTGCAAGGCAATTGGATGGGTGCCTCCCTACCAAC +
Preference number: 6 (lower is better)
Translates to: NWSFLPLALILGLPA*LYSARQLDGCLPTN
Trigger: GTTGGTAGGGAGGCACCCATCCAATTGCCTTGCAGAATACAGCAAGGCAGGGAGCCCAAGAATCAGAGCCAAGGGAAGAAACGACCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS TCA 72 bp ACTTGTCCCCATCTGTGTCCAGAATGTCCATCAGGGTaGGGCCTGTTGTGTAGTGCCGGCATCCAAAGAAAG +
Preference number: 6 (lower is better)
Translates to: TCPHLCPECPSG*GLLCSAGIQRK
Trigger: CTTTCTTTGGATGCCGGCACTACACAACAGGCCTCACCCTGATGGACATTCTGGACACAGATGGGGACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.6
ENST00000477054.6
ENST00000520542.5
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS GCA 72 bp CCTGCCTTGCTGTATTCTGCAAGGCAATTGGATGGGTaGCTCCCTACCAACAATTTCCCAATGAGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: PALLYSARQLDG*LPTNNFPMRWW
Trigger: CCACCACCTCATTGGGAAATTGTTGGTAGGGAGGCACCCATCCAATTGCCTTGCAGAATACAGCAAGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CCA 72 bp GACAAGCTGCTTTACTCGATAGCTCAGGACCCGATTTaGGGGGATGGTCACTTCCCTTTGGCCCTTGTGTTT +
Preference number: 6 (lower is better)
Translates to: DKLLYSIAQDPI*GDGHFPLALVF
Trigger: AAACACAAGGGCCAAAGGGAAGTGACCATCCCCCCAAATCGGGTCCTGAGCTATCGAGTAAAGCAGCTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.6
ENST00000477054.6
ENST00000520542.5
CDS CCA 72 bp CATCTCGTGCTCCCGTGTACACTCTCAAGGAGATGCTaGTCTTCCTTATCTGGATGCCATCTGGCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: HLVLPCTLSRRC*SSLSGCHLASP
Trigger: TGGAGAAGCCAGATGGCATCCAGATAAGGAAGACCAGCATCTCCTTGAGAGTGTACACGGGAGCACGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CCA 72 bp TCTCAGTTCACTACCAACCTGGGAATTCTAGGTGTCTaGAAAGACAGTACCCGGGAACCACAGGCCCATCTC +
Preference number: 6 (lower is better)
Translates to: SQFTTNLGILGV*KDSTREPQAHL
Trigger: GAGATGGGCCTGTGGTTCCCGGGTACTGTCTTTCCAGACACCTAGAATTCCCAGGTTGGTAGTGAACTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CCA 72 bp GCTCCCTGCCTTGCTGTATTCTGCAAGGCAATTGGATaGGTGCCTCCCTACCAACAATTTCCCAATGAGGTG +
Preference number: 6 (lower is better)
Translates to: APCLAVFCKAIG*VPPYQQFPNEV
Trigger: CACCTCATTGGGAAATTGTTGGTAGGGAGGCACCCATCCAATTGCCTTGCAGAATACAGCAAGGCAGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CAA 72 bp CTTGGGCTCCCTGCCTTGCTGTATTCTGCAAGGCAATaGGATGGGTGCCTCCCTACCAACAATTTCCCAATG +
Preference number: 6 (lower is better)
Translates to: LGLPALLYSARQ*DGCLPTNNFPM
Trigger: CATTGGGAAATTGTTGGTAGGGAGGCACCCATCCAATTGCCTTGCAGAATACAGCAAGGCAGGGAGCCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CAA 72 bp TTTCTTCCCTTGGCTCTGATTCTTGGGCTCCCTGCCTaGCTGTATTCTGCAAGGCAATTGGATGGGTGCCTC +
Preference number: 6 (lower is better)
Translates to: FLPLALILGLPA*LYSARQLDGCL
Trigger: GAGGCACCCATCCAATTGCCTTGCAGAATACAGCAAGGCAGGGAGCCCAAGAATCAGAGCCAAGGGAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CAA 90 bp AACTATGGAATAAGAAGGGGCTGTACCCTGGGACTTCTGGGTCCCTaGAGAATATGGGCATTCCCTTCCACTATGACCATGGCCCTCAGC +
Preference number: 6 (lower is better)
Translates to: NYGIRRGCTLGLLGP*RIWAFPSTMTMALS
Trigger: GCTGAGGGCCATGGTCATAGTGGAAGGGAATGCCCATATTCTCAAGGGACCCAGAAGTCCCAGGGTACAGCCCCTTCTTATTCCATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486560.1
CDS CAA 90 bp GAGCCTGCATCCTCACCAGCGTGTGTCAATGGGAAAGCACTGTATTaGCAGACCCTTCCCACATCCTCAAAAACAGGCAGTCATAGGACT +
Preference number: 6 (lower is better)
Translates to: EPASSPACVNGKALY*QTLPTSSKTGSHRT
Trigger: AGTCCTATGACTGCCTGTTTTTGAGGATGTGGGAAGGGTCTGCAAATACAGTGCTTTCCCATTGACACACGCTGGTGAGGATGCAGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479136.5
ENST00000519429.1
CDS GCA 72 bp CCTCACCAGCGTGTGTCAATGGGAAAGCACTGTATTTaGAGACCCTTCCCACATCCTCAAAAACAGGCAGTC +
Preference number: 6 (lower is better)
Translates to: PHQRVSMGKHCI*RPFPHPQKQAV
Trigger: GACTGCCTGTTTTTGAGGATGTGGGAAGGGTCTGCAAATACAGTGCTTTCCCATTGACACACGCTGGTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479136.5
ENST00000519429.1
CDS CCA 72 bp GTGTACACTCTCAAGGAGATGCTGGTCTTCCTTATCTaGATGCCATCTGGCTTCTCCACCTACCTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: VYTLKEMLVFLI*MPSGFSTYLLL
Trigger: GAGAAGGAGGTAGGTGGAGAAGCCAGATGGCATCCAGATAAGGAAGACCAGCATCTCCTTGAGAGTGTACAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CAA 72 bp TGTTTAGAGGAGACAGATGCAGCCTCCAGACTAAAGTaGAAACCTGCTAGGCAGTGCCTCCCGACTTCCTAC +
Preference number: 6 (lower is better)
Translates to: CLEETDAASRLK*KPARQCLPTSY
Trigger: GTAGGAAGTCGGGAGGCACTGCCTAGCAGGTTTCAACTTTAGTCTGGAGGCTGCATCTGTCTCCTCTAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477054.6
ENST00000479136.5
CDS CAA 72 bp ATAAGAAGGGGCTGTACCCTGGGACTTCTGGGTCCCTaGAGAATATGGGCATTCCCTTCCACTATGACCATG +
Preference number: 6 (lower is better)
Translates to: IRRGCTLGLLGP*RIWAFPSTMTM
Trigger: CATGGTCATAGTGGAAGGGAATGCCCATATTCTCAAGGGACCCAGAAGTCCCAGGGTACAGCCCCTTCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486560.1
CDS CAA 90 bp GTTGCCAGACTTCACATTACTAACCTCAACTGGTCGTTTCTTCCCTaGGCTCTGATTCTTGGGCTCCCTGCCTTGCTGTATTCTGCAAGG +
Preference number: 6 (lower is better)
Translates to: VARLHITNLNWSFLP*ALILGLPALLYSAR
Trigger: CCTTGCAGAATACAGCAAGGCAGGGAGCCCAAGAATCAGAGCCAAGGGAAGAAACGACCAGTTGAGGTTAGTAATGTGAAGTCTGGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS TCA 72 bp CCAGATACTGCTGGGATATCCGGTTCTCCGATATCTTaGTTTTCTGATGGTGGAAGCCCTGGAAACTGCCTG +
Preference number: 6 (lower is better)
Translates to: PDTAGISGSPIS*FSDGGSPGNCL
Trigger: CAGGCAGTTTCCAGGGCTTCCACCATCAGAAAATCAAGATATCGGAGAACCGGATATCCCAGCAGTATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.6
ENST00000464556.1
ENST00000477054.6
ENST00000520542.5
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS TCA 72 bp TGTCCAGGGAATTGTCACAAACCAGCTGCATGGATGTaGGCCGGCAGAAAACTATGGAATAAGAAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: CPGNCHKPAAWM*AGRKLWNKKGL
Trigger: CAGCCCCTTCTTATTCCATAGTTTTCTGCCGGCTCACATCCATGCAGCTGGTTTGTGACAATTCCCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486560.1
CDS CCA 72 bp AAAGGGGGCAGCATACACTCAGTCGCTCCGCAAATTTaGGTCAGACTTCTCTATCCCTTTCCAAGCTCTCTT +
Preference number: 6 (lower is better)
Translates to: KGGSIHSVAPQI*VRLLYPFPSSL
Trigger: AAGAGAGCTTGGAAAGGGATAGAGAAGTCTGACCCAAATTTGCGGAGCGACTGAGTGTATGCTGCCCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479136.5
ENST00000519429.1
CDS CAA 72 bp TCCTCACCAGCGTGTGTCAATGGGAAAGCACTGTATTaGCAGACCCTTCCCACATCCTCAAAAACAGGCAGT +
Preference number: 6 (lower is better)
Translates to: SSPACVNGKALY*QTLPTSSKTGS
Trigger: ACTGCCTGTTTTTGAGGATGTGGGAAGGGTCTGCAAATACAGTGCTTTCCCATTGACACACGCTGGTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479136.5
ENST00000519429.1
CDS CCA 72 bp GTCCAGGCCACACCCCCACAATTAAGTCAGAGTTTCTaGAGACGGGACTCAGTCGTCACTAGTTTTAAAGTT +
Preference number: 6 (lower is better)
Translates to: VQATPPQLSQSF*RRDSVVTSFKV
Trigger: AACTTTAAAACTAGTGACGACTGAGTCCCGTCTCCAGAAACTCTGACTTAATTGTGGGGGTGTGGCCTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477054.6
ENST00000479136.5
CDS CAA 72 bp GAGATGGCCCTGAGAGATCTGGCTCCAAAATTTATATaGCCGGTCGCTTTTCAGGGTTTCCTCCTTTACCGT +
Preference number: 6 (lower is better)
Translates to: EMALRDLAPKFI*PVAFQGFLLYR
Trigger: ACGGTAAAGGAGGAAACCCTGAAAAGCGACCGGCAATATAAATTTTGGAGCCAGATCTCTCAGGGCCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.6
ENST00000464556.1
ENST00000468820.1
ENST00000477054.6
ENST00000520542.5
ENST00000523371.5
ENST00000524039.5
CDS CAA 72 bp CTTCACATTACTAACCTCAACTGGTCGTTTCTTCCCTaGGCTCTGATTCTTGGGCTCCCTGCCTTGCTGTAT +
Preference number: 6 (lower is better)
Translates to: LHITNLNWSFLP*ALILGLPALLY
Trigger: ATACAGCAAGGCAGGGAGCCCAAGAATCAGAGCCAAGGGAAGAAACGACCAGTTGAGGTTAGTAATGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CAA 90 bp TTTATAGCTGAGATGGCCCTGAGAGATCTGGCTCCAAAATTTATATaGCCGGTCGCTTTTCAGGGTTTCCTCCTTTACCGTCTCCAGAGT +
Preference number: 6 (lower is better)
Translates to: FIAEMALRDLAPKFI*PVAFQGFLLYRLQS
Trigger: ACTCTGGAGACGGTAAAGGAGGAAACCCTGAAAAGCGACCGGCAATATAAATTTTGGAGCCAGATCTCTCAGGGCCATCTCAGCTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.6
ENST00000464556.1
ENST00000468820.1
ENST00000477054.6
ENST00000520542.5
ENST00000523371.5
ENST00000524039.5
CDS CAA 90 bp CTGGGCCACCCAGCCCAAAAGGTTTTATTTCTAAGGCTCTGTTATTaGTCTGACTGTCTTCTGGAGACCACCTCTTTGTATCTTCCCTTC +
Preference number: 6 (lower is better)
Translates to: LGHPAQKVLFLRLCY*SDCLLETTSLYLPF
Trigger: GAAGGGAAGATACAAAGAGGTGGTCTCCAGAAGACAGTCAGACAAATAACAGAGCCTTAGAAATAAAACCTTTTGGGCTGGGTGGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477054.6
ENST00000479136.5
CDS TCA 72 bp GGATGGTCACTTCCCTTTGGCCCTTGTGTTTATAGCTaGGATGGCCCTGAGAGATCTGGCTCCAAAATTTAT +
Preference number: 6 (lower is better)
Translates to: GWSLPFGPCVYS*DGPERSGSKIY
Trigger: ATAAATTTTGGAGCCAGATCTCTCAGGGCCATCTCAGCTATAAACACAAGGGCCAAAGGGAAGTGACCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.6
ENST00000477054.6
ENST00000520542.5
CDS CCA 72 bp CACTCTCCATGTCCTCCAACTTCTCCTTCATGTTTCTaGAATCCTCCGAACCCAAAGACTTTCCTAAACAGG +
Preference number: 6 (lower is better)
Translates to: HSPCPPTSPSCF*NPPNPKTFLNR
Trigger: CCTGTTTAGGAAAGTCTTTGGGTTCGGAGGATTCCAGAAACATGAAGGAGAAGTTGGAGGACATGGAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394179.5
ENST00000418519.6
ENST00000519429.1
ENST00000522564.5
ENST00000523371.5
CDS CCA 72 bp CACTCTCCATGTCCTCCAACTTCTCCTTCATGTTTCTaGAATCCTCCGAACCCAAAGACTTTCTCATCGTCT +
Preference number: 6 (lower is better)
Translates to: HSPCPPTSPSCF*NPPNPKTFSSS
Trigger: AGACGATGAGAAAGTCTTTGGGTTCGGAGGATTCCAGAAACATGAAGGAGAAGTTGGAGGACATGGAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394175.6
CDS CCA 72 bp CACTCTCCATGTCCTCCAACTTCTCCTTCATGTTTCTaGAATCCTCCGAACCCAAAGACTTTCCTTCTGGAA +
Preference number: 6 (lower is better)
Translates to: HSPCPPTSPSCF*NPPNPKTFLLE
Trigger: TTCCAGAAGGAAAGTCTTTGGGTTCGGAGGATTCCAGAAACATGAAGGAGAAGTTGGAGGACATGGAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520542.5
CDS TCA 72 bp TGCTGGGATATCCGGTTCTCCGATATCTTGATTTTCTaGTGGTGGAAGCCCTGGAAACTGCCTGAAATTGTT +
Preference number: 6 (lower is better)
Translates to: CWDIRFSDILIF*WWKPWKLPEIV
Trigger: AACAATTTCAGGCAGTTTCCAGGGCTTCCACCATCAGAAAATCAAGATATCGGAGAACCGGATATCCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.6
ENST00000464556.1
ENST00000477054.6
ENST00000520542.5
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS TCA 72 bp CTACATGAGAATCACCTGAGGAGTTATTACAAATCCTaGTGTCCAGGCCACACCCCCACAATTAAGTCAGAG +
Preference number: 6 (lower is better)
Translates to: LHENHLRSYYKS*CPGHTPTIKSE
Trigger: CTCTGACTTAATTGTGGGGGTGTGGCCTGGACATCAGGATTTGTAATAACTCCTCAGGTGATTCTCATGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477054.6
ENST00000479136.5
CDS TCA 72 bp GCAGTGGTTCTCAACCTTGACTACATGAGAATCACCTaGGGAGTTATTACAAATCCTGATGTCCAGGCCACA +
Preference number: 6 (lower is better)
Translates to: AVVLNLDYMRIT*GVITNPDVQAT
Trigger: TGTGGCCTGGACATCAGGATTTGTAATAACTCCTCAGGTGATTCTCATGTAGTCAAGGTTGAGAACCACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477054.6
ENST00000479136.5
CDS GCA 72 bp CTCTTCAGCTTCCTGTTTTCAAGGGTAGCCAGATACTaGTGGGATATCCGGTTCTCCGATATCTTGATTTTC +
Preference number: 6 (lower is better)
Translates to: LFSFLFSRVARY*WDIRFSDILIF
Trigger: GAAAATCAAGATATCGGAGAACCGGATATCCCAGCAGTATCTGGCTACCCTTGAAAACAGGAAGCTGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.6
ENST00000464556.1
ENST00000477054.6
ENST00000520542.5
ENST00000523371.5
ENST00000524039.5
CDS GCA 72 bp CACCATCCTTCTCTGTTTTCAAGGGTAGCCAGATACTaGTGGGATATCCGGTTCTCCGATATCTTGATTTTC +
Preference number: 6 (lower is better)
Translates to: HHPSLFSRVARY*WDIRFSDILIF
Trigger: GAAAATCAAGATATCGGAGAACCGGATATCCCAGCAGTATCTGGCTACCCTTGAAAACAGAGAAGGATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522564.5
CDS CCA 72 bp CACTCTCCATGTCCTCCAACTTCTCCTTCATGTTTCTaGAATCCTCCGAACCCAAAGACTTTCCTTGTGTTT +
Preference number: 6 (lower is better)
Translates to: HSPCPPTSPSCF*NPPNPKTFLVF
Trigger: AAACACAAGGAAAGTCTTTGGGTTCGGAGGATTCCAGAAACATGAAGGAGAAGTTGGAGGACATGGAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468820.1
ENST00000524039.5
CDS TCA 72 bp TCCTCCGAACCCAAAGACTTTCCTTGTGTTTATAGCTaGGATGGCCCTGAGAGATCTGGCTCCAAAATTTAT +
Preference number: 6 (lower is better)
Translates to: SSEPKDFPCVYS*DGPERSGSKIY
Trigger: ATAAATTTTGGAGCCAGATCTCTCAGGGCCATCTCAGCTATAAACACAAGGAAAGTCTTTGGGTTCGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468820.1
ENST00000524039.5
CDS GCA 72 bp AGTTATTTCAGAATCTTCAGATCACCTCCAGTCCCCTaGAGACTTCTCTTCCCAGTGATGGAAGTTTTTACT +
Preference number: 6 (lower is better)
Translates to: SYFRIFRSPPVP*RLLFPVMEVFT
Trigger: AGTAAAAACTTCCATCACTGGGAAGAGAAGTCTGCAGGGGACTGGAGGTGATCTGAAGATTCTGAAATAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479136.5
ENST00000519429.1
CDS GCA 72 bp TACAATTCTTGTGATTTCCTCAAATACGCTGAACATTaGGCCTGGACCAACTCAGAAACAGAAGCCAATTTC +
Preference number: 6 (lower is better)
Translates to: YNSCDFLKYAEH*AWTNSETEANF
Trigger: GAAATTGGCTTCTGTTTCTGAGTTGGTCCAGGCGCAATGTTCAGCGTATTTGAGGAAATCACAAGAATTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394175.6
ENST00000477054.6
CDS CCA 72 bp TCTTGTGATTTCCTCAAATACGCTGAACATTGCGCCTaGACCAACTCAGAAACAGAAGCCAATTTCAGTTTT +
Preference number: 6 (lower is better)
Translates to: SCDFLKYAEHCA*TNSETEANFSF
Trigger: AAAACTGAAATTGGCTTCTGTTTCTGAGTTGGTCCAGGCGCAATGTTCAGCGTATTTGAGGAAATCACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394175.6
ENST00000477054.6
CDS CAA 72 bp CCAGCCCAAAAGGTTTTATTTCTAAGGCTCTGTTATTaGTCTGACTGTCTTCTGGAGACCACCTCTTTGTAT +
Preference number: 6 (lower is better)
Translates to: PAQKVLFLRLCY*SDCLLETTSLY
Trigger: ATACAAAGAGGTGGTCTCCAGAAGACAGTCAGACAAATAACAGAGCCTTAGAAATAAAACCTTTTGGGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477054.6
ENST00000479136.5
CDS CAA 90 bp ACATTGCGCCTGGACCAACTCAGAAACAGAAGCCAATTTCAGTTTTaGGGAGGAGGGTATTGGTTCAAGTATTTAAATCTTCCACATTTG +
Preference number: 6 (lower is better)
Translates to: TLRLDQLRNRSQFQF*GGGYWFKYLNLPHL
Trigger: CAAATGTGGAAGATTTAAATACTTGAACCAATACCCTCCTCCCAAAAACTGAAATTGGCTTCTGTTTCTGAGTTGGTCCAGGCGCAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394175.6
ENST00000477054.6
CDS CAA 90 bp CTAAGGCTCTGTTATTTGTCTGACTGTCTTCTGGAGACCACCTCTTaGTATCTTCCCTTCTTCCAGTCTTTCCGTGTTAAAATTAAGCAT +
Preference number: 6 (lower is better)
Translates to: LRLCYLSDCLLETTS*YLPFFQSFRVKIKH
Trigger: ATGCTTAATTTTAACACGGAAAGACTGGAAGAAGGGAAGATACAAAGAGGTGGTCTCCAGAAGACAGTCAGACAAATAACAGAGCCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477054.6
ENST00000479136.5
CDS CAA 72 bp TTTTCTGATGGTGGAAGCCCTGGAAACTGCCTGAAATaGTTATTTCTTTGGGTAATCTCACTATCAACTCTC +
Preference number: 6 (lower is better)
Translates to: FSDGGSPGNCLK*LFLWVISLSTL
Trigger: GAGAGTTGATAGTGAGATTACCCAAAGAAATAACAATTTCAGGCAGTTTCCAGGGCTTCCACCATCAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.6
ENST00000464556.1
ENST00000477054.6
ENST00000520542.5
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS CAA 72 bp TTATTTCTTTGGGTAATCTCACTATCAACTCTCCCGTaGAGTCTACATTATCCAGAATTTGAAACTCAGCCT +
Preference number: 6 (lower is better)
Translates to: LFLWVISLSTLP*SLHYPEFETQP
Trigger: AGGCTGAGTTTCAAATTCTGGATAATGTAGACTCAACGGGAGAGTTGATAGTGAGATTACCCAAAGAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.6
ENST00000464556.1
ENST00000477054.6
ENST00000520542.5
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5
CDS CAA 72 bp GCCCTTAAGAAGGTACTTTGTAATATTTCTCCACCCTaGAGAATGTACTTTGTAAGCCTATCCCAAACATAT +
Preference number: 6 (lower is better)
Translates to: ALKKVLCNISPP*RMYFVSLSQTY
Trigger: ATATGTTTGGGATAGGCTTACAAAGTACATTCTCAAGGGTGGAGAAATATTACAAAGTACCTTCTTAAGGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477054.6
CDS CAA 90 bp CTGAAATTGTTATTTCTTTGGGTAATCTCACTATCAACTCTCCCGTaGAGTCTACATTATCCAGAATTTGAAACTCAGCCTTTTGACCTT +
Preference number: 6 (lower is better)
Translates to: LKLLFLWVISLSTLP*SLHYPEFETQPFDL
Trigger: AAGGTCAAAAGGCTGAGTTTCAAATTCTGGATAATGTAGACTCAACGGGAGAGTTGATAGTGAGATTACCCAAAGAAATAACAATTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000309481.11
ENST00000360317.7
ENST00000394175.6
ENST00000394179.5
ENST00000418519.6
ENST00000464556.1
ENST00000477054.6
ENST00000520542.5
ENST00000522564.5
ENST00000523371.5
ENST00000524039.5