Pregenerated sensors for GSC (Homo sapiens)
Ensembl gene IDs: ENSG00000133937Ensembl transcript IDs: ENST00000238558.5
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGCTAGTCGCGGGCGGCCTCGGGCTGCTGGGCTGTGCGCGCCCTaGCCCCAGACGCCGACCCTCCCGGCTCTGTACACTATTTACAGC | + |
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Preference number: 1 (lower is better) Translates to: GASRGRPRAAGLCAP*PQTPTLPALYTIYS Trigger: GCTGTAAATAGTGTACAGAGCCGGGAGGGTCGGCGTCTGGGGTCAGGGCGCGCACAGCCCAGCAGCCCGAGGCCGCCCGCGACTAGCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| 3UTR-3UTR GCA 90 bp | ACTATAAATACTACGGTGGGGGCTAGTCGCGGGCGGCCTCGGGCTGCTGGGCTGGCAAGGCAGCGCGTGTaGAAGAAAGTAGCATCGTCT | + |
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Preference number: 2 (lower is better) Translates to: TINTTVGASRGRPRAAGLARQRV*KKVASS Trigger: AGACGATGCTACTTTCTTGCACACGCGCTGCCTTGC...CAGCCCAGCAGCCCGAGGCCGCCCGCGACTAGCCCCCACCGTAGTATTTATAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| 3UTR-3UTR GCA 90 bp | ACACTATTTACAGCTCCTCGTTCCTCTTTCTCGACCCCCTCCCGCAAGGCAGCGAGCATCGTCTGTCTGTaGAAGTCCTTCGAGTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: TLFTAPRSSFSTPSRKAASIVCL*KSFELG Trigger: ACCTAACTCGAAGGACTTGCACAGACAGACGATGCT...CGCTGCCTTGCGGGAGGGGGTCGAGAAAGAGGAACGAGGAGCTGTAAATAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| 3UTR TCA 72 bp | CGCGGGCGGCCTCGGGCTGCTGGGCTGTGCGCGCCCTaGCCCCAGACGCCGACCCTCCCGGCTCTGTACACT | + |
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Preference number: 3 (lower is better) Translates to: RGRPRAAGLCAP*PQTPTLPALYT Trigger: AGTGTACAGAGCCGGGAGGGTCGGCGTCTGGGGTCAGGGCGCGCACAGCCCAGCAGCCCGAGGCCGCCCGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| 3UTR GCA 72 bp | CCTCTTTCTCGACCCCCTCCCGCAAGGCAGCGCGTGTaGAAGAAAGTAGCATCGTCTGTCTGTGCAAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: PLSRPPPARQRV*KKVASSVCASP Trigger: AGGACTTGCACAGACAGACGATGCTACTTTCTTGCACACGCGCTGCCTTGCGGGAGGGGGTCGAGAAAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR CCA 90 bp | TGCTGGGCTGTGCGCGCCCTGACCCCAGACGCCGACCCTCCCGGCTCTGTACACGGGGCCCTCGTAGCCTaGGGGCGTCGGGACGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: CWAVRALTPDADPPGSVHGALVA*GRRDAG Trigger: TCCTGCGTCCCGACGCCCCCAGGCTACGAGGGCCCC...GTGTACAGAGCCGGGAGGGTCGGCGTCTGGGGTCAGGGCGCGCACAGCCCAGCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR TCA 90 bp | GTCGCGGGCGGCCTCGGGCTGCTGGGCTGTGCGCGCCCTGACCCCAGACGCCGAGGATGTTGTCGATGCTaGACATGCTGGCGGGCATCC | + |
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Preference number: 4 (lower is better) Translates to: VAGGLGLLGCARPDPRRRGCCRC*TCWRAS Trigger: GGATGCCCGCCAGCATGTTCAGCATCGACAACATCC...TCGGCGTCTGGGGTCAGGGCGCGCACAGCCCAGCAGCCCGAGGCCGCCCGCGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR CCA 90 bp | CGACCCCCTCCCGCAAGGCAGCGCGTGTGCAAGAAAGTAGCATCGTCTGTCTGTACGCAGGAGCACTGCTaGGCGCCCAGCGGCGGCACG | + |
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Preference number: 4 (lower is better) Translates to: RPPPARQRVCKKVASSVCTQEHC*APSGGT Trigger: CGTGCCGCCGCTGGGCGCCCAGCAGTGCTCCTGCGT...ACAGACAGACGATGCTACTTTCTTGCACACGCGCTGCCTTGCGGGAGGGGGTCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR TCA 90 bp | CCCGCAAGGCAGCGCGTGTGCAAGAAAGTAGCATCGTCTGTCTGTGCAAGTCCTGGGCTGTGCGCGCCCTaGCCCCAGACGCCGACCCTC | + |
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Preference number: 4 (lower is better) Translates to: PARQRVCKKVASSVCASPGLCAP*PQTPTL Trigger: GAGGGTCGGCGTCTGGGGTCAGGGCGCGCACAGCCC...AGGACTTGCACAGACAGACGATGCTACTTTCTTGCACACGCGCTGCCTTGCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR GCA 90 bp | CCAGACGCCGACCCTCCCGGCTCTGTACACTATTTACAGCTCCTCGTTCCTCTTGGAGCCGCCGCGCTGTaGGCCACCGGCAACACCGAG | + |
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Preference number: 4 (lower is better) Translates to: PDADPPGSVHYLQLLVPLGAAAL*ATGNTE Trigger: CTCGGTGTTGCCGGTGGCGCACAGCGCGGCGGCTCC...AAGAGGAACGAGGAGCTGTAAATAGTGTACAGAGCCGGGAGGGTCGGCGTCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR GCA 90 bp | CCTCTTTCTCGACCCCCTCCCGCAAGGCAGCGCGTGTGCAAGAAAGTAGCATCGCCAGCTGCTCGCGCGTaGCCACGTCCGGGTACTTGG | + |
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Preference number: 4 (lower is better) Translates to: PLSRPPPARQRVCKKVASPAARA*PRPGTW Trigger: CCAAGTACCCGGACGTGGGCACGCGCGAGCAGCTGG...CGATGCTACTTTCTTGCACACGCGCTGCCTTGCGGGAGGGGGTCGAGAAAGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR CCA 90 bp | CCTCCCGCAAGGCAGCGCGTGTGCAAGAAAGTAGCATCGTCTGTCTGTGCAAGTAGGAGGCGCCGCCGCTaGCGCCGTAGAGCGAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: PPARQRVCKKVASSVCASRRRRR*RRRASP Trigger: GGGACTCGCTCTACGGCGCCAGCGGCGGCGCCTCCT...ACTTGCACAGACAGACGATGCTACTTTCTTGCACACGCGCTGCCTTGCGGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR TCA 90 bp | ACAGCTCCTCGTTCCTCTTTCTCGACCCCCTCCCGCAAGGCAGCGCGTGTGCAAGACAGTGCAGCTGGTTaGGAAGCTGCAGCTCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: TAPRSSFSTPSRKAARVQDSAAG*EAAARC Trigger: GCACCGAGCTGCAGCTTCTCAACCAGCTGCACTGTC...TTGCACACGCGCTGCCTTGCGGGAGGGGGTCGAGAAAGAGGAACGAGGAGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR GCA 90 bp | ACACTATTTACAGCTCCTCGTTCCTCTTTCTCGACCCCCTCCCGCAAGGCAGCGGCAACACCGAGTCCTTaGAGCGCGGCCGGGCGGCTA | + |
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Preference number: 4 (lower is better) Translates to: TLFTAPRSSFSTPSRKAAATPSP*SAAGRL Trigger: TAGCCGCCCGGCCGCGCTGCAAGGACTCGGTGTTGC...CGCTGCCTTGCGGGAGGGGGTCGAGAAAGAGGAACGAGGAGCTGTAAATAGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR GCA 90 bp | CGACCCCCTCCCGCAAGGCAGCGCGTGTGCAAGAAAGTAGCATCGTCTGTCTGTTTCTCCTCGCGGAGGTaGACTTTCCGGGCCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RPPPARQRVCKKVASSVCFSSRR*TFRASC Trigger: GCAGCTGGCCCGGAAAGTGCACCTCCGCGAGGAGAA...ACAGACAGACGATGCTACTTTCTTGCACACGCGCTGCCTTGCGGGAGGGGGTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR CCA 90 bp | ACAGCTCCTCGTTCCTCTTTCTCGACCCCCTCCCGCAAGGCAGCGCGTGTGCAACGCCGACAGTGCAGCTaGTTGAGAAGCTGCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: TAPRSSFSTPSRKAARVQRRQCS*LRSCSS Trigger: CGAGCTGCAGCTTCTCAACCAGCTGCACTGTCGGCG...TTGCACACGCGCTGCCTTGCGGGAGGGGGTCGAGAAAGAGGAACGAGGAGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR GCA 90 bp | GCCGACCCTCCCGGCTCTGTACACTATTTACAGCTCCTCGTTCCTCTTTCTCGAACTTTCCGGGCCAGCTaGTCGCGCGTGCCCACGTCC | + |
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Preference number: 4 (lower is better) Translates to: ADPPGSVHYLQLLVPLSRTFRAS*SRVPTS Trigger: GGACGTGGGCACGCGCGAGCAGCTGGCCCGGAAAGT...TCGAGAAAGAGGAACGAGGAGCTGTAAATAGTGTACAGAGCCGGGAGGGTCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR GCA 90 bp | CTGGGCTGTGCGCGCCCTGACCCCAGACGCCGACCCTCCCGGCTCTGTACACTAAGCATCGTCTGTCTGTaGAAGTCCTTCGAGTTAGGT | + |
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Preference number: 4 (lower is better) Translates to: LGCARPDPRRRPSRLCTLSIVCL*KSFELG Trigger: ACCTAACTCGAAGGACTTGCACAGACAGACGATGCT...TAGTGTACAGAGCCGGGAGGGTCGGCGTCTGGGGTCAGGGCGCGCACAGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR GCA 90 bp | CCTCCCGCAAGGCAGCGCGTGTGCAAGAAAGTAGCATCGTCTGTCTGTGCAAGTCGGTGCGCGACAGCGTaGCCACGTTCATGTAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: PPARQRVCKKVASSVCASRCATA*PRSCRA Trigger: TGCCCTACATGAACGTGGGCACGCTGTCGCGCACCG...ACTTGCACAGACAGACGATGCTACTTTCTTGCACACGCGCTGCCTTGCGGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR GCA 90 bp | CCCGCAAGGCAGCGCGTGTGCAAGAAAGTAGCATCGTCTGTCTGTGCAAGTCCTGATGAGGACCGCTTCTaGCGCCTCCATTTGGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: PARQRVCKKVASSVCASPDEDRF*RLHLAR Trigger: CCGCGCCAAATGGAGGCGGCAGAAGCGGTCCTCATC...AGGACTTGCACAGACAGACGATGCTACTTTCTTGCACACGCGCTGCCTTGCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR TCA 90 bp | GCCGACCCTCCCGGCTCTGTACACTATTTACAGCTCCTCGTTCCTCTTTCTCGATTCCCTCTTCTCCGGTaGCGCCTTCGACGACGACGT | + |
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Preference number: 4 (lower is better) Translates to: ADPPGSVHYLQLLVPLSRFPLLR*RLRRRR Trigger: ACGTCGTCGTCGAAGGCGTCACCGGAGAAGAGGGAA...TCGAGAAAGAGGAACGAGGAGCTGTAAATAGTGTACAGAGCCGGGAGGGTCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR GCA 90 bp | CGACCCTCCCGGCTCTGTACACTATTTACAGCTCCTCGTTCCTCTTTCTCGACCAGCTGGTTGAGAAGCTaGAGCTCGGTGCGCGACAGC | + |
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Preference number: 4 (lower is better) Translates to: RPSRLCTLFTAPRSSFSTSWLRS*SSVRDS Trigger: GCTGTCGCGCACCGAGCTGCAGCTTCTCAACCAGCT...GGTCGAGAAAGAGGAACGAGGAGCTGTAAATAGTGTACAGAGCCGGGAGGGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR CCA 90 bp | GTTCCTCTTTCTCGACCCCCTCCCGCAAGGCAGCGCGTGTGCAAGAAAGTAGCACCACGTCCGGGTACTTaGTCTCCTGGAAGAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: VPLSRPPPARQRVCKKVAPRPGT*SPGRGS Trigger: AGAACCTCTTCCAGGAGACCAAGTACCCGGACGTGG...TGCTACTTTCTTGCACACGCGCTGCCTTGCGGGAGGGGGTCGAGAAAGAGGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR GCA 90 bp | GCTCTGTACACTATTTACAGCTCCTCGTTCCTCTTTCTCGACCCCCTCCCGCAACGCTTCCGCCGACAGTaGAGCTGGTTGAGAAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ALYTIYSSSFLFLDPLPQRFRRQ*SWLRSC Trigger: GCAGCTTCTCAACCAGCTGCACTGTCGGCGGAAGCG...TTGCGGGAGGGGGTCGAGAAAGAGGAACGAGGAGCTGTAAATAGTGTACAGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR CCA 90 bp | ACACTATTTACAGCTCCTCGTTCCTCTTTCTCGACCCCCTCCCGCAAGGCAGCGGGGTACTTGGTCTCCTaGAAGAGGTTCTCGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: TLFTAPRSSFSTPSRKAAGYLVS*KRFSRA Trigger: AGCTCTCGAGAACCTCTTCCAGGAGACCAAGTACCC...CGCTGCCTTGCGGGAGGGGGTCGAGAAAGAGGAACGAGGAGCTGTAAATAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR GCA 90 bp | CAGACGCCGACCCTCCCGGCTCTGTACACTATTTACAGCTCCTCGTTCCTCTTTTCGAGAGCTTCGAGCTaGTCGTCAGTGAAGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: QTPTLPALYTIYSSSFLFSRASS*SSVKMV Trigger: CACCATCTTCACTGACGAGCAGCTCGAAGCTCTCGA...AAAGAGGAACGAGGAGCTGTAAATAGTGTACAGAGCCGGGAGGGTCGGCGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR GCA 90 bp | AGGCAGCGCGTGTGCAAGAAAGTAGCATCGTCTGTCTGTGCAAGTCCTTCGAGTGCAAGGCAGCGCGTGTaGAAGAAAGTAGCATCGTCT | + |
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Preference number: 4 (lower is better) Translates to: RQRVCKKVASSVCASPSSARQRV*KKVASS Trigger: AGACGATGCTACTTTCTTGCACACGCGCTGCCTTGC...ACTCGAAGGACTTGCACAGACAGACGATGCTACTTTCTTGCACACGCGCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR GCA 90 bp | CCATCACTTTATTGTACTGTCACCCTTAATTTAACTATAAATACTACGGTGGGGGAAGCTGCAGCTCGGTaGGCGACAGCGTGCCCACGT | + |
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Preference number: 4 (lower is better) Translates to: PSLYCTVTLNLTINTTVGEAAAR*ATACPR Trigger: ACGTGGGCACGCTGTCGCGCACCGAGCTGCAGCTTC...CCCCACCGTAGTATTTATAGTTAAATTAAGGGTGACAGTACAATAAAGTGATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS TCA 90 bp | GCAGCTGCCCGTAGAAGTAGTTGTTGTAGCCGAGGCGGGAGCCGCTaGCCGCGGCCGGGAGGCCCGCGCCGCCGGGGGCCACGGGGCGCG | + |
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Preference number: 5 (lower is better) Translates to: AAARRSSCCSRGGSR*PRPGGPRRRGPRGA Trigger: CGCGCCCCGTGGCCCCCGGCGGCGCGGGCCTCCCGGCCGCGGTCAGCGGCTCCCGCCTCGGCTACAACAACTACTTCTACGGGCAGCTGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR CAA 90 bp | GTCGCGGGCGGCCTCGGGCTGCTGGGCTGTGCGCGCCCTGACCCCAGACGCCGAGGCAACACCGAGTCCTaGCAGCGCGGCCGGGCGGCT | + |
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Preference number: 5 (lower is better) Translates to: VAGGLGLLGCARPDPRRRGNTES*QRGRAA Trigger: AGCCGCCCGGCCGCGCTGCAAGGACTCGGTGTTGCC...TCGGCGTCTGGGGTCAGGGCGCGCACAGCCCAGCAGCCCGAGGCCGCCCGCGAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS GCA 90 bp | GAGTCCCCGTGCAGGGCCGGGAAGACGACGGGAGCCGCCGCGCTGTaGGCCACCGGCAACACCGAGTCCTTGCAGCGCGGCCGGGCGGCT | + |
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Preference number: 5 (lower is better) Translates to: ESPCRAGKTTGAAAL*ATGNTESLQRGRAA Trigger: AGCCGCCCGGCCGCGCTGCAAGGACTCGGTGTTGCCGGTGGCGCACAGCGCGGCGGCTCCCGTCGTCTTCCCGGCCCTGCACGGGGACTC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS CCA 90 bp | CGGGGCGCGGGTAGAAGGCGCCATAGTCCGAGGAGGCGCCGCCGCTaGCGCCGTAGAGCGAGTCCCCGTGCAGGGCCGGGAAGACGACGG | + |
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Preference number: 5 (lower is better) Translates to: RGAGRRRHSPRRRRR*RRRASPRAGPGRRR Trigger: CCGTCGTCTTCCCGGCCCTGCACGGGGACTCGCTCTACGGCGCCAGCGGCGGCGCCTCCTCGGACTATGGCGCCTTCTACCCGCGCCCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS TCA 90 bp | CCGAGTCCTTGCAGCGCGGCCGGGCGGCTAGGATGTTGTCGATGCTaGACATGCTGGCGGGCATCCCCGAGCCCCGCGTCGGGACCGGGG | + |
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Preference number: 5 (lower is better) Translates to: PSPCSAAGRLGCCRC*TCWRASPSPASGPG Trigger: CCCCGGTCCCGACGCGGGGCTCGGGGATGCCCGCCAGCATGTTCAGCATCGACAACATCCTAGCCGCCCGGCCGCGCTGCAAGGACTCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR CAA 90 bp | ACAGCTCCTCGTTCCTCTTTCTCGACCCCCTCCCGCAAGGCAGCGCGTGTGCAACGACAGTGCAGCTGGTaGAGAAGCTGCAGCTCGGTG | + |
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Preference number: 5 (lower is better) Translates to: TAPRSSFSTPSRKAARVQRQCSW*RSCSSV Trigger: CACCGAGCTGCAGCTTCTCAACCAGCTGCACTGTCG...TTGCACACGCGCTGCCTTGCGGGAGGGGGTCGAGAAAGAGGAACGAGGAGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR CAA 90 bp | ATAAATACTACGGTGGGGGCTAGTCGCGGGCGGCCTCGGGCTGCTGGGCTGTGCTTCGACGACGACGTCTaGTTCCACTTCTCCGCGTTC | + |
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Preference number: 5 (lower is better) Translates to: INTTVGASRGRPRAAGLCFDDDV*FHFSAF Trigger: GAACGCGGAGAAGTGGAACAAGACGTCGTCGTCGAA...GCACAGCCCAGCAGCCCGAGGCCGCCCGCGACTAGCCCCCACCGTAGTATTTAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR CAA 90 bp | GTTCCTCTTTCTCGACCCCCTCCCGCAAGGCAGCGCGTGTGCAAGAAAGTAGCACCCACGTCCGGGTACTaGGTCTCCTGGAAGAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: VPLSRPPPARQRVCKKVAPTSGY*VSWKRF Trigger: GAACCTCTTCCAGGAGACCAAGTACCCGGACGTGGG...TGCTACTTTCTTGCACACGCGCTGCCTTGCGGGAGGGGGTCGAGAAAGAGGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS-3UTR CAA 90 bp | CAGACGCCGACCCTCCCGGCTCTGTACACTATTTACAGCTCCTCGTTCCTCTTTTTCTGCCGCCTCCATTaGGCGCGGCGGTTCTTAAAC | + |
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Preference number: 5 (lower is better) Translates to: QTPTLPALYTIYSSSFLFFCRLH*ARRFLN Trigger: GTTTAAGAACCGCCGCGCCAAATGGAGGCGGCAGAA...AAAGAGGAACGAGGAGCTGTAAATAGTGTACAGAGCCGGGAGGGTCGGCGTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS GCA 72 bp | TGCAGGGCCGGGAAGACGACGGGAGCCGCCGCGCTGTaGGCCACCGGCAACACCGAGTCCTTGCAGCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: CRAGKTTGAAAL*ATGNTESLQRG Trigger: GCCGCGCTGCAAGGACTCGGTGTTGCCGGTGGCGCACAGCGCGGCGGCTCCCGTCGTCTTCCCGGCCCTGCA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS CCA 72 bp | GGTAGAAGGCGCCATAGTCCGAGGAGGCGCCGCCGCTaGCGCCGTAGAGCGAGTCCCCGTGCAGGGCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: GRRRHSPRRRRR*RRRASPRAGPG Trigger: TCCCGGCCCTGCACGGGGACTCGCTCTACGGCGCCAGCGGCGGCGCCTCCTCGGACTATGGCGCCTTCTACC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS GCA 72 bp | CCGCCGCGCTGTGCGCCACCGGCAACACCGAGTCCTTaGAGCGCGGCCGGGCGGCTAGGATGTTGTCGATGC | + |
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Preference number: 6 (lower is better) Translates to: PPRCAPPATPSP*SAAGRLGCCRC Trigger: GCATCGACAACATCCTAGCCGCCCGGCCGCGCTGCAAGGACTCGGTGTTGCCGGTGGCGCACAGCGCGGCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS CAA 72 bp | GCCGCCGCGCTGTGCGCCACCGGCAACACCGAGTCCTaGCAGCGCGGCCGGGCGGCTAGGATGTTGTCGATG | + |
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Preference number: 6 (lower is better) Translates to: AAALCATGNTES*QRGRAARMLSM Trigger: CATCGACAACATCCTAGCCGCCCGGCCGCGCTGCAAGGACTCGGTGTTGCCGGTGGCGCACAGCGCGGCGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS TCA 72 bp | TGCAGCGCGGCCGGGCGGCTAGGATGTTGTCGATGCTaGACATGCTGGCGGGCATCCCCGAGCCCCGCGTCG | + |
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Preference number: 6 (lower is better) Translates to: CSAAGRLGCCRC*TCWRASPSPAS Trigger: CGACGCGGGGCTCGGGGATGCCCGCCAGCATGTTCAGCATCGACAACATCCTAGCCGCCCGGCCGCGCTGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS CAA 72 bp | GTGCGGTGCCGCCGCTTCCGCCGACAGTGCAGCTGGTaGAGAAGCTGCAGCTCGGTGCGCGACAGCGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: VRCRRFRRQCSW*RSCSSVRDSVP Trigger: GGGCACGCTGTCGCGCACCGAGCTGCAGCTTCTCAACCAGCTGCACTGTCGGCGGAAGCGGCGGCACCGCAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS CAA 90 bp | ACGACGGGAGCCGCCGCGCTGTGCGCCACCGGCAACACCGAGTCCTaGCAGCGCGGCCGGGCGGCTAGGATGTTGTCGATGCTGAACATG | + |
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Preference number: 6 (lower is better) Translates to: TTGAAALCATGNTES*QRGRAARMLSMLNM Trigger: CATGTTCAGCATCGACAACATCCTAGCCGCCCGGCCGCGCTGCAAGGACTCGGTGTTGCCGGTGGCGCACAGCGCGGCGGCTCCCGTCGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS GCA 72 bp | CGCCGCTTCCGCCGACAGTGCAGCTGGTTGAGAAGCTaGAGCTCGGTGCGCGACAGCGTGCCCACGTTCATG | + |
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Preference number: 6 (lower is better) Translates to: RRFRRQCSWLRS*SSVRDSVPTFM Trigger: CATGAACGTGGGCACGCTGTCGCGCACCGAGCTGCAGCTTCTCAACCAGCTGCACTGTCGGCGGAAGCGGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS CCA 72 bp | TGCTCGCGCGTGCCCACGTCCGGGTACTTGGTCTCCTaGAAGAGGTTCTCGAGAGCTTCGAGCTGCTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: CSRVPTSGYLVS*KRFSRASSCSS Trigger: TGACGAGCAGCTCGAAGCTCTCGAGAACCTCTTCCAGGAGACCAAGTACCCGGACGTGGGCACGCGCGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS CAA 90 bp | CCTTCCTCTTCCCTCTTCTCCGGTGACGCCTTCGACGACGACGTCTaGTTCCACTTCTCCGCGTTCTCCGACTCCTCTGATGAGGACCGC | + |
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Preference number: 6 (lower is better) Translates to: PSSSLFSGDAFDDDV*FHFSAFSDSSDEDR Trigger: GCGGTCCTCATCAGAGGAGTCGGAGAACGCGGAGAAGTGGAACAAGACGTCGTCGTCGAAGGCGTCACCGGAGAAGAGGGAAGAGGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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| CDS CAA 72 bp | TCCCTCTTCTCCGGTGACGCCTTCGACGACGACGTCTaGTTCCACTTCTCCGCGTTCTCCGACTCCTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: SLFSGDAFDDDV*FHFSAFSDSSD Trigger: ATCAGAGGAGTCGGAGAACGCGGAGAAGTGGAACAAGACGTCGTCGTCGAAGGCGTCACCGGAGAAGAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238558.5 |
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