Pregenerated sensors for GRXCR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000215203Ensembl transcript IDs: ENST00000399770.3
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCAGAACTCGCCCACTGTaGGAGGACGCGATCCGAAAC | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSRTRPL*EDAIRN Trigger: GTTTCGGATCGCGTCCTCTCACAGTGGGCGAGTTCT...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR TCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCGCCAATGGTGGGCATTaGAAAGGACCTGAGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSANGGH*KGPEQW Trigger: CCACTGCTCAGGTCCTTTTCAATGCCCACCATTGGC...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR GCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCGAAACATGGACATCTTaGTCCCATGGCACACGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSETWTS*SHGTRS Trigger: GCTCCGTGTGCCATGGGAGCAAGATGTCCATGTTTC...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCATGGCACACGGAGCATaGAAGAAAGCCAAAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSMAHGA*KKAKAS Trigger: GGAGGCTTTGGCTTTCTTCCATGCTCCGTGTGCCAT...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCGACATCTTGCTCCCATaGCACACGGAGCATGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSDILLP*HTEHGR Trigger: TCTTCCATGCTCCGTGTGCCATGGGAGCAAGATGTC...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR TCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCAGAATCCAGAGAGCCTaGCGGTTGCCCATCTTCATA | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSRIQRA*RLPIFI Trigger: TATGAAGATGGGCAACCGTCAGGCTCTCTGGATTCT...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR GCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCTGGACCCGTTGTTACTaGACTAGTCCACTTGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSWTRCY*TSPLAR Trigger: TCTGGCAAGTGGACTAGTGCAGTAACAACGGGTCCA...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR GCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCAGAGAGCCTGACGGTTaGCCATCTTCATACACTTCC | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSREPDG*PSSYTS Trigger: GGAAGTGTATGAAGATGGGCAACCGTCAGGCTCTCT...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCAAACCGGACTTTCCGTaGCCTGTCACTTTCTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSKPDFP*PVTFWL Trigger: AAGCCAGAAAGTGACAGGCCACGGAAAGTCCGGTTT...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCCCTTCTGACTCTATGTaGCCATTCTGCTGTCCATCG | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSPSDSM*PFCCPS Trigger: CGATGGACAGCAGAATGGCCACATAGAGTCAGAAGG...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR TCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCTTCTTTAAAGGGCAGTaGACACGCTGCATGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSFFKGQ*TRCMLH Trigger: ATGCAGCATGCAGCGTGTTCACTGCCCTTTAAAGAA...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR TCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCGCATTGAAAAGGACCTaGGCAGTGGACATGTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSALKRT*AVDMSL Trigger: TAGAGACATGTCCACTGCTCAGGTCCTTTTCAATGC...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR TCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCGAAAGGCTTGAACTTTaGAGCCAATGGTGGGCATTG | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSERLEL*SQWWAL Trigger: CAATGCCCACCATTGGCTTCAAAGTTCAAGCCTTTC...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR GCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCACGCTGCATGCTGCATaGCTGCATAGAGCTATTACT | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSTLHAA*LHRAIT Trigger: AGTAATAGCTCTATGCAGGCATGCAGCATGCAGCGT...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR GCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCTCTATGTGGCCATTCTaGTGTCCATCGGAATCACCT | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSSMWPF*CPSESP Trigger: AGGTGATTCCGATGGACAGCAGAATGGCCACATAGA...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCCCACACGAAGGCAGGTaGTATAAATCACTACACGGT | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSPHEGR*YKSLHG Trigger: ACCGTGTAGTGATTTATACCACCTGCCTTCGTGTGG...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCAGCAGTTTCGAAACATaGACATCTTGCTCCCATGGC | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSSSFET*TSCSHG Trigger: GCCATGGGAGCAAGATGTCCATGTTTCGAAACTGCT...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR TCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCTCACCTCCACCCATATaGACAGTTTACAGCATTCTG | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSSPPPI*TVYSIL Trigger: CAGAATGCTGTAAACTGTTCATATGGGTGGAGGTGA...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR GCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCGAAGACCATTTTCATTaGAAGCCGTACACTTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSEDHFH*KPYTSG Trigger: CCCTGAAGTGTACGGCTTGCAATGAAAATGGTCTTC...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCCAGTTTACAGCATTCTaGACCCGTTGTTACTGCACT | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSQFTAF*TRCYCT Trigger: AGTGCAGTAACAACGGGTCCAGAATGCTGTAAACTG...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCCTATCCCACAGATACTaGCACATTCAGAATCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSLSHRY*HIQNPE Trigger: CTCTGGATTCTGAATGTGCCAGTATCTGTGGGATAG...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCAGAGGGACACTCATGTaGATGCTGTACTCTCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSRGTLM*MLYSLN Trigger: ATTGAGAGAGTACAGCATCCACATGAGTGTCCCTCT...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR GCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCGGACACTCATGTGGATaGTGTACTCTCTCAATTTTG | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSGHSCG*CTLSIL Trigger: CAAAATTGAGAGAGTACAGCATCCACATGAGTGTCC...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCAAAGGACCTGAGCAGTaGACATGTCTCTACTATTCA | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSKGPEQ*TCLYYS Trigger: TGAATAGTAGAGACATGTCCACTGCTCAGGTCCTTT...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCACAAGTGCAAGAAAGTaGCATGCAGCGAATCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSTSARK*HAANLK Trigger: TTTCAGATTCGCTGCATGCCACTTTCTTGCACTTGT...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCACCAGCAAGCTATCCTaGTCATTCTCATTCTCATCA | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSTSKLS*SFSFSS Trigger: TGATGAGAATGAGAATGACCAGGATAGCTTGCTGGT...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR TCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCCAGTTCTTACAACGCTaGAGACCATTTTCATTGCAA | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSQFLQR*RPFSLQ Trigger: TTGCAATGAAAATGGTCTTCAGCGTTGTAAGAACTG...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR GCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCTGCATGCTGCATGCCTaGATAGAGCTATTACTATTA | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSCMLHA*IELLLL Trigger: TAATAGTAATAGCTCTATGCAGGCATGCAGCATGCA...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR GCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCTGCAAGAAAGTGGCATaGAGCGAATCTGAAAATATG | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSCKKVA*SESENM Trigger: CATATTTTCAGATTCGCTGCATGCCACTTTCTTGCA...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR GCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCTTGGTTAGGATGTCTTaGAGTTCTCCTGATTCATTC | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSLVRMS*SSPDSF Trigger: GAATGAATCAGGAGAACTGCAAGACATCCTAACCAA...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCGTACTCTCTCAATTTTaGTTAGGATGTCTTGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSVLSQF*LGCLAV Trigger: AACTGCAAGACATCCTAACCAAAATTGAGAGAGTAC...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR GCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCAGATCAGTTGATGGTTaGTGTAATACTTTGGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSRSVDG*CNTLVK Trigger: TTTGACCAAAGTATTACAGCAACCATCAACTGATCT...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCTTTACGCGATGGTTTTaGAAAATCTTTCTAACCAGT | + |
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Preference number: 4 (lower is better) Translates to: TKVLPLINKMRFFLGRSSFTRWF*KIFLTS Trigger: ACTGGTTAGAAAGATTTTCCAAAACCATCGCGTAAA...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CCA 90 bp | AACTCGCCCACTGTGAGAGGACGCGATCCGAAACCGGACTTTCCGTaGCCTGTCACTTTCTGGCTTCATCTCCCTTTTAAGCATGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: NSPTVRGRDPKPDFP*PVTFWLHLPFKHGH Trigger: GTGACCATGCTTAAAAGGGAGATGAAGCCAGAAAGTGACAGGCCACGGAAAGTCCGGTTTCGGATCGCGTCCTCTCACAGTGGGCGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CCA 90 bp | AGAGGACGCGATCCGAAACCGGACTTTCCGTGGCCTGTCACTTTCTaGCTTCATCTCCCTTTTAAGCATGGTCACCTCCACCCATATGAA | + |
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Preference number: 5 (lower is better) Translates to: RGRDPKPDFPWPVTF*LHLPFKHGHLHPYE Trigger: TTCATATGGGTGGAGGTGACCATGCTTAAAAGGGAGATGAAGCCAGAAAGTGACAGGCCACGGAAAGTCCGGTTTCGGATCGCGTCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CCA 90 bp | GCAGTTTCGAAACATGGACATCTTGCTCCCATGGCACACGGAGCATaGAAGAAAGCCAAAGCCTCCACAAGAGGGACACTCATGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: AVSKHGHLAPMAHGA*KKAKASTRGTLMWM Trigger: CATCCACATGAGTGTCCCTCTTGTGGAGGCTTTGGCTTTCTTCCATGCTCCGTGTGCCATGGGAGCAAGATGTCCATGTTTCGAAACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS TCA 90 bp | TCCATCTATCCCACAGATACTGGCACATTCAGAATCCAGAGAGCCTaGCGGTTGCCCATCTTCATACACTTCCTTCAGAACTCGCCCACT | + |
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Preference number: 5 (lower is better) Translates to: SIYPTDTGTFRIQRA*RLPIFIHFLQNSPT Trigger: AGTGGGCGAGTTCTGAAGGAAGTGTATGAAGATGGGCAACCGTCAGGCTCTCTGGATTCTGAATGTGCCAGTATCTGTGGGATAGATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CCA 90 bp | TCTGCTGTCCATCGGAATCACCTAGTCCATCTATCCCACAGATACTaGCACATTCAGAATCCAGAGAGCCTGACGGTTGCCCATCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: SAVHRNHLVHLSHRY*HIQNPESLTVAHLH Trigger: ATGAAGATGGGCAACCGTCAGGCTCTCTGGATTCTGAATGTGCCAGTATCTGTGGGATAGATGGACTAGGTGATTCCGATGGACAGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CCA 90 bp | AAAGAGTCTGTGAAGCAGTTTCGAAACATGGACATCTTGCTCCCATaGCACACGGAGCATGGAAGAAAGCCAAAGCCTCCACAAGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: KESVKQFRNMDILLP*HTEHGRKPKPPQEG Trigger: TCCCTCTTGTGGAGGCTTTGGCTTTCTTCCATGCTCCGTGTGCCATGGGAGCAAGATGTCCATGTTTCGAAACTGCTTCACAGACTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS GCA 90 bp | TGGTCATTCTCATTCTCATCACCTTCTGACTCTATGTGGCCATTCTaGTGTCCATCGGAATCACCTAGTCCATCTATCCCACAGATACTG | + |
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Preference number: 5 (lower is better) Translates to: WSFSFSSPSDSMWPF*CPSESPSPSIPQIL Trigger: CAGTATCTGTGGGATAGATGGACTAGGTGATTCCGATGGACAGCAGAATGGCCACATAGAGTCAGAAGGTGATGAGAATGAGAATGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CCA 90 bp | AAGCTATCCTGGTCATTCTCATTCTCATCACCTTCTGACTCTATGTaGCCATTCTGCTGTCCATCGGAATCACCTAGTCCATCTATCCCA | + |
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Preference number: 5 (lower is better) Translates to: KLSWSFSFSSPSDSM*PFCCPSESPSPSIP Trigger: TGGGATAGATGGACTAGGTGATTCCGATGGACAGCAGAATGGCCACATAGAGTCAGAAGGTGATGAGAATGAGAATGACCAGGATAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS TCA 90 bp | GGCAAGAAAATGAAAGGCTTGAACTTTGAAGCCAATGGTGGGCATTaGAAAGGACCTGAGCAGTGGACATGTCTCTACTATTCATTGTCC | + |
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Preference number: 5 (lower is better) Translates to: GKKMKGLNFEANGGH*KGPEQWTCLYYSLS Trigger: GGACAATGAATAGTAGAGACATGTCCACTGCTCAGGTCCTTTTCAATGCCCACCATTGGCTTCAAAGTTCAAGCCTTTCATTTTCTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CCA 90 bp | CCAGTTCACATCTTTCAAAGGTTGTCCGGACCACACGAAGGCAGGTaGTATAAATCACTACACGGTCAAATTCTAGATCAGTTGATGGTT | + |
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Preference number: 5 (lower is better) Translates to: PVHIFQRLSGPHEGR*YKSLHGQILDQLMV Trigger: AACCATCAACTGATCTAGAATTTGACCGTGTAGTGATTTATACCACCTGCCTTCGTGTGGTCCGGACAACCTTTGAAAGATGTGAACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CAA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCCGAAACATGGACATCTaGCTCCCATGGCACACGGAG | + |
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Preference number: 5 (lower is better) Translates to: TKVLPLINKMRFFLGRSSRNMDI*LPWHTE Trigger: CTCCGTGTGCCATGGGAGCAAGATGTCCATGTTTCG...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CAA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCTCTCACTGGCAGCCCTaGCTAACACCAGCAAGCTAT | + |
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Preference number: 5 (lower is better) Translates to: TKVLPLINKMRFFLGRSSSHWQP*LTPASY Trigger: ATAGCTTGCTGGTGTTAGCAAGGGCTGCCAGTGAGA...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CAA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCCACATCTTTCAAAGGTaGTCCGGACCACACGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: TKVLPLINKMRFFLGRSSHIFQR*SGPHEG Trigger: GCCTTCGTGTGGTCCGGACAACCTTTGAAAGATGTG...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CCA 90 bp | GTTGATGGTTGCTGTAATACTTTGGTCAAATTGTTAAATAGAGCCTaGCCAGCACTCACTTTGTATTTGACGCCTCTGACTGTGCCATTT | + |
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Preference number: 5 (lower is better) Translates to: VDGCCNTLVKLLNRA*PALTLYLTPLTVPF Trigger: AAATGGCACAGTCAGAGGCGTCAAATACAAAGTGAGTGCTGGCCAGGCTCTATTTAACAATTTGACCAAAGTATTACAGCAACCATCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CAA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCGCACTCACTTTGTATTaGACGCCTCTGACTGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: TKVLPLINKMRFFLGRSSALTLY*TPLTVP Trigger: TGGCACAGTCAGAGGCGTCAAATACAAAGTGAGTGC...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CAA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCTGGCCAGCACTCACTTaGTATTTGACGCCTCTGACT | + |
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Preference number: 5 (lower is better) Translates to: TKVLPLINKMRFFLGRSSWPALT*YLTPLT Trigger: AGTCAGAGGCGTCAAATACAAAGTGAGTGCTGGCCA...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CAA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCGTACACTTCAGGGCTTaGAAAGAGTCTGTGAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: TKVLPLINKMRFFLGRSSVHFRA*KESVKQ Trigger: CTGCTTCACAGACTCTTTCAAAGCCCTGAAGTGTAC...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CCA 90 bp | TGTCTCTACTATTCATTGTCCAAACCAGAGGTTAGAGGTAAAATGTaGAACCAAGTTTGTAGGATAAGAGCAGTCACAGTTTTCTCACAG | + |
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Preference number: 5 (lower is better) Translates to: CLYYSLSKPEVRGKM*NQVCRIRAVTVFSQ Trigger: CTGTGAGAAAACTGTGACTGCTCTTATCCTACAAACTTGGTTCCACATTTTACCTCTAACCTCTGGTTTGGACAATGAATAGTAGAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CAA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCACTGCACTAGTCCACTaGCCAGATAGCAATATCAGA | + |
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Preference number: 5 (lower is better) Translates to: TKVLPLINKMRFFLGRSSTALVH*PDSNIR Trigger: TCTGATATTGCTATCTGGCAAGTGGACTAGTGCAGT...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CAA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCTGTCTCTACTATTCATaGTCCAAACCAGAGGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: TKVLPLINKMRFFLGRSSCLYYS*SKPEVR Trigger: TCTAACCTCTGGTTTGGACAATGAATAGTAGAGACA...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CAA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCTGTACTCTCTCAATTTaGGTTAGGATGTCTTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: TKVLPLINKMRFFLGRSSCTLSI*VRMSCS Trigger: ACTGCAAGACATCCTAACCAAAATTGAGAGAGTACA...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CAA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCAATACTTTGGTCAAATaGTTAAATAGAGCCTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: TKVLPLINKMRFFLGRSSNTLVK*LNRAWP Trigger: TGGCCAGGCTCTATTTAACAATTTGACCAAAGTATT...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CAA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCTTTTACGCGATGGTTTaGGAAAATCTTTCTAACCAG | + |
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Preference number: 5 (lower is better) Translates to: TKVLPLINKMRFFLGRSSFYAMV*ENLSNQ Trigger: CTGGTTAGAAAGATTTTCCAAAACCATCGCGTAAAA...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS-3UTR CAA 90 bp | ACCAAAGTATTGCCTTTGATTAATAAAATGAGGTTTTTCCTGGGTAGAAGCTCCCTCCTGATTCATTCATaGACAAAATTTTCTCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: TKVLPLINKMRFFLGRSSLLIHS*TKFSQH Trigger: GTGCTGAGAAAATTTTGTCAATGAATGAATCAGGAG...GGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CCA 72 bp | ACTGTGAGAGGACGCGATCCGAAACCGGACTTTCCGTaGCCTGTCACTTTCTGGCTTCATCTCCCTTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: TVRGRDPKPDFP*PVTFWLHLPFK Trigger: CTTAAAAGGGAGATGAAGCCAGAAAGTGACAGGCCACGGAAAGTCCGGTTTCGGATCGCGTCCTCTCACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CCA 72 bp | AAACATGGACATCTTGCTCCCATGGCACACGGAGCATaGAAGAAAGCCAAAGCCTCCACAAGAGGGACACTC | + |
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Preference number: 6 (lower is better) Translates to: KHGHLAPMAHGA*KKAKASTRGTL Trigger: GAGTGTCCCTCTTGTGGAGGCTTTGGCTTTCTTCCATGCTCCGTGTGCCATGGGAGCAAGATGTCCATGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CCA 72 bp | GTGAAGCAGTTTCGAAACATGGACATCTTGCTCCCATaGCACACGGAGCATGGAAGAAAGCCAAAGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VKQFRNMDILLP*HTEHGRKPKPP Trigger: TGGAGGCTTTGGCTTTCTTCCATGCTCCGTGTGCCATGGGAGCAAGATGTCCATGTTTCGAAACTGCTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CAA 90 bp | AGGGCTTTGAAAGAGTCTGTGAAGCAGTTTCGAAACATGGACATCTaGCTCCCATGGCACACGGAGCATGGAAGAAAGCCAAAGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RALKESVKQFRNMDI*LPWHTEHGRKPKPP Trigger: TGGAGGCTTTGGCTTTCTTCCATGCTCCGTGTGCCATGGGAGCAAGATGTCCATGTTTCGAAACTGCTTCACAGACTCTTTCAAAGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS TCA 72 bp | CCCACAGATACTGGCACATTCAGAATCCAGAGAGCCTaGCGGTTGCCCATCTTCATACACTTCCTTCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: PTDTGTFRIQRA*RLPIFIHFLQN Trigger: GTTCTGAAGGAAGTGTATGAAGATGGGCAACCGTCAGGCTCTCTGGATTCTGAATGTGCCAGTATCTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS GCA 72 bp | ATACTGGCACATTCAGAATCCAGAGAGCCTGACGGTTaGCCATCTTCATACACTTCCTTCAGAACTCGCCCA | + |
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Preference number: 6 (lower is better) Translates to: ILAHSESREPDG*PSSYTSFRTRP Trigger: TGGGCGAGTTCTGAAGGAAGTGTATGAAGATGGGCAACCGTCAGGCTCTCTGGATTCTGAATGTGCCAGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CCA 72 bp | GGTCACCTCCACCCATATGAACAGTTTACAGCATTCTaGACCCGTTGTTACTGCACTAGTCCACTTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: GHLHPYEQFTAF*TRCYCTSPLAR Trigger: TCTGGCAAGTGGACTAGTGCAGTAACAACGGGTCCAGAATGCTGTAAACTGTTCATATGGGTGGAGGTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CAA 72 bp | AAAGAGTCTGTGAAGCAGTTTCGAAACATGGACATCTaGCTCCCATGGCACACGGAGCATGGAAGAAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: KESVKQFRNMDI*LPWHTEHGRKP Trigger: TGGCTTTCTTCCATGCTCCGTGTGCCATGGGAGCAAGATGTCCATGTTTCGAAACTGCTTCACAGACTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS TCA 72 bp | CAAGCTATCCTGGTCATTCTCATTCTCATCACCTTCTaGCTCTATGTGGCCATTCTGCTGTCCATCGGAATC | + |
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Preference number: 6 (lower is better) Translates to: QAILVILILITF*LYVAILLSIGI Trigger: GATTCCGATGGACAGCAGAATGGCCACATAGAGTCAGAAGGTGATGAGAATGAGAATGACCAGGATAGCTTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS GCA 72 bp | TCATTCTCATCACCTTCTGACTCTATGTGGCCATTCTaGTGTCCATCGGAATCACCTAGTCCATCTATCCCA | + |
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Preference number: 6 (lower is better) Translates to: SFSSPSDSMWPF*CPSESPSPSIP Trigger: TGGGATAGATGGACTAGGTGATTCCGATGGACAGCAGAATGGCCACATAGAGTCAGAAGGTGATGAGAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CCA 72 bp | TGGTCATTCTCATTCTCATCACCTTCTGACTCTATGTaGCCATTCTGCTGTCCATCGGAATCACCTAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: WSFSFSSPSDSM*PFCCPSESPSP Trigger: TGGACTAGGTGATTCCGATGGACAGCAGAATGGCCACATAGAGTCAGAAGGTGATGAGAATGAGAATGACCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CAA 90 bp | AACAGTTTACAGCATTCTGGACCCGTTGTTACTGCACTAGTCCACTaGCCAGATAGCAATATCAGAGCCAATTCTAGTGATGGCAGCACT | + |
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Preference number: 6 (lower is better) Translates to: NSLQHSGPVVTALVH*PDSNIRANSSDGST Trigger: AGTGCTGCCATCACTAGAATTGGCTCTGATATTGCTATCTGGCAAGTGGACTAGTGCAGTAACAACGGGTCCAGAATGCTGTAAACTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CAA 72 bp | CAGCATTCTGGACCCGTTGTTACTGCACTAGTCCACTaGCCAGATAGCAATATCAGAGCCAATTCTAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: QHSGPVVTALVH*PDSNIRANSSD Trigger: ATCACTAGAATTGGCTCTGATATTGCTATCTGGCAAGTGGACTAGTGCAGTAACAACGGGTCCAGAATGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CCA 72 bp | CATGGTGGACTCTTTAACAGGACAAGTGCAAGAAAGTaGCATGCAGCGAATCTGAAAATATGTATGGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: HGGLFNRTSARK*HAANLKICMGQ Trigger: TTGCCCCATACATATTTTCAGATTCGCTGCATGCCACTTTCTTGCACTTGTCCTGTTAAAGAGTCCACCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CCA 72 bp | ATCTTTCAAAGGTTGTCCGGACCACACGAAGGCAGGTaGTATAAATCACTACACGGTCAAATTCTAGATCAG | + |
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Preference number: 6 (lower is better) Translates to: IFQRLSGPHEGR*YKSLHGQILDQ Trigger: CTGATCTAGAATTTGACCGTGTAGTGATTTATACCACCTGCCTTCGTGTGGTCCGGACAACCTTTGAAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CAA 72 bp | AGACCATTTTCATTGCAAGCCGTACACTTCAGGGCTTaGAAAGAGTCTGTGAAGCAGTTTCGAAACATGGAC | + |
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Preference number: 6 (lower is better) Translates to: RPFSLQAVHFRA*KESVKQFRNMD Trigger: GTCCATGTTTCGAAACTGCTTCACAGACTCTTTCAAAGCCCTGAAGTGTACGGCTTGCAATGAAAATGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CAA 72 bp | GTCAAATTGTTAAATAGAGCCTGGCCAGCACTCACTTaGTATTTGACGCCTCTGACTGTGCCATTTTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: VKLLNRAWPALT*YLTPLTVPFLL Trigger: AAGCAAAAATGGCACAGTCAGAGGCGTCAAATACAAAGTGAGTGCTGGCCAGGCTCTATTTAACAATTTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CAA 90 bp | TTGGTCAAATTGTTAAATAGAGCCTGGCCAGCACTCACTTTGTATTaGACGCCTCTGACTGTGCCATTTTTGCTTAAAATGTTGACTCTT | + |
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Preference number: 6 (lower is better) Translates to: LVKLLNRAWPALTLY*TPLTVPFLLKMLTL Trigger: AAGAGTCAACATTTTAAGCAAAAATGGCACAGTCAGAGGCGTCAAATACAAAGTGAGTGCTGGCCAGGCTCTATTTAACAATTTGACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CAA 90 bp | AATACTTTGGTCAAATTGTTAAATAGAGCCTGGCCAGCACTCACTTaGTATTTGACGCCTCTGACTGTGCCATTTTTGCTTAAAATGTTG | + |
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Preference number: 6 (lower is better) Translates to: NTLVKLLNRAWPALT*YLTPLTVPFLLKML Trigger: CAACATTTTAAGCAAAAATGGCACAGTCAGAGGCGTCAAATACAAAGTGAGTGCTGGCCAGGCTCTATTTAACAATTTGACCAAAGTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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| CDS CCA 72 bp | TATTCATTGTCCAAACCAGAGGTTAGAGGTAAAATGTaGAACCAAGTTTGTAGGATAAGAGCAGTCACAGTT | + |
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Preference number: 6 (lower is better) Translates to: YSLSKPEVRGKM*NQVCRIRAVTV Trigger: AACTGTGACTGCTCTTATCCTACAAACTTGGTTCCACATTTTACCTCTAACCTCTGGTTTGGACAATGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399770.3 |
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