RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRWD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000105447

Ensembl transcript IDs: ENST00000253237.10, ENST00000598711.1, ENST00000599949.1

Found 358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAGAAGGCAGAACGCGGCGGCACCCAGTGGGCGGAAGGTTGGGTTaGACTGGACTCCCAGTGGCCTCCCCCAGCCTAGCGGCCTGGGGG +
Preference number: 1 (lower is better)
Translates to: REGRTRRHPVGGRLG*TGLPVASPSLAAWG
Trigger: CCCCCAGGCCGCTAGGCTGGGGGAGGCCACTGGGAGTCCAGTGCAACCCAACCTTCCGCCCACTGGGTGCCGCCGCGTTCTGCCTTCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 90 bp AGGTTAGTCCCTTGTCGCAGGTCTCTCAGCCAGTGGGGAGAGGAGTaGCAAAAGCTAGCCTCCCACCCAGGCCTCCTGGGAGCCACGGCC +
Preference number: 1 (lower is better)
Translates to: RLVPCRRSLSQWGEE*QKLASHPGLLGATA
Trigger: GGCCGTGGCTCCCAGGAGGCCTGGGTGGGAGGCTAGCTTTTGCCACTCCTCTCCCCACTGGCTGAGAGACCTGCGACAAGGGACTAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR GCA 90 bp GGGAACAGGCTCAGGGAACGCCATGAGCTGGCCAGGCCCCCGCAGTaGCAGGGGGAATGCTGGTTGGGTCCTAAGCCTTTCTTTCCTTCC +
Preference number: 1 (lower is better)
Translates to: GNRLRERHELARPPQ*QGECWLGPKPFFPS
Trigger: GGAAGGAAAGAAAGGCTTAGGACCCAACCAGCATTCCCCCTGGCACTGCGGGGGCCTGGCCAGCTCATGGCGTTCCCTGAGCCTGTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 90 bp CAGATGGAAGGACACTTAGAGAAGGCAGAACGCGGCGGCACCCAGTaGGCGGAAGGTTGGGTTGCACTGGACTCCCAGTGGCCTCCCCCA +
Preference number: 1 (lower is better)
Translates to: QMEGHLEKAERGGTQ*AEGWVALDSQWPPP
Trigger: TGGGGGAGGCCACTGGGAGTCCAGTGCAACCCAACCTTCCGCCCACTGGGTGCCGCCGCGTTCTGCCTTCTCTAAGTGTCCTTCCATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 90 bp CAACTGGGGCTGAGGTTAGTCCCTTGTCGCAGGTCTCTCAGCCAGTaGGGAGAGGAGTGGCAAAAGCTAGCCTCCCACCCAGGCCTCCTG +
Preference number: 1 (lower is better)
Translates to: QLGLRLVPCRRSLSQ*GEEWQKLASHPGLL
Trigger: CAGGAGGCCTGGGTGGGAGGCTAGCTTTTGCCACTCCTCTCCCCACTGGCTGAGAGACCTGCGACAAGGGACTAACCTCAGCCCCAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR GCA 90 bp AGGGCTGGGCATGGACCCGCACCCCTCATTGCCTTCAGGGTTCACTaGAACGTTACCAAACGCTTGGCCCTGTGGTGGGGAACTTCCCAG +
Preference number: 1 (lower is better)
Translates to: RAGHGPAPLIAFRVH*NVTKRLALWWGTSQ
Trigger: CTGGGAAGTTCCCCACCACAGGGCCAAGCGTTTGGTAACGTTGCAGTGAACCCTGAAGGCAATGAGGGGTGCGGGTCCATGCCCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR TCA 90 bp CCCAGAGTTCTGCCCTCGAAATCCTCCAGTCCCACCTCAGCCCCGTaGGGCAGACCCGTTGTCTACTTCCCAAAGCCAACGGGAACCTTC +
Preference number: 1 (lower is better)
Translates to: PRVLPSKSSSPTSAP*GRPVVYFPKPTGTF
Trigger: GAAGGTTCCCGTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTGGAGGATTTCGAGGGCAGAACTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR GCA 90 bp GGGTGGACCAAAGGAAAGGGCTGGGCATGGACCCGCACCCCTCATTaGCTTCAGGGTTCACTGCAACGTTACCAAACGCTTGGCCCTGTG +
Preference number: 1 (lower is better)
Translates to: GWTKGKGWAWTRTPH*LQGSLQRYQTLGPV
Trigger: CACAGGGCCAAGCGTTTGGTAACGTTGCAGTGAACCCTGAAGGCAATGAGGGGTGCGGGTCCATGCCCAGCCCTTTCCTTTGGTCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 90 bp GGAGGAGGGGAGAGGGTCGCATGTAGCCCCCACACGGAGAAATCCTaGCCAAACCCAGCTGGCAGGAAGACAACGGGCAGAAGCAAATTG +
Preference number: 1 (lower is better)
Translates to: GGGERVACSPHTEKS*PNPAGRKTTGRSKL
Trigger: CAATTTGCTTCTGCCCGTTGTCTTCCTGCCAGCTGGGTTTGGCCAGGATTTCTCCGTGTGGGGGCTACATGCGACCCTCTCCCCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR TCA 90 bp TCACGGCAGCCCACAGGCCGGCCAGTCTCAGTCAACAGACCTGAATaGACCCCTTCCAGGGGAGCCCAATTCGACTTCAGTTTCCAAGCA +
Preference number: 1 (lower is better)
Translates to: SRQPTGRPVSVNRPE*TPSRGAQFDFSFQA
Trigger: TGCTTGGAAACTGAAGTCGAATTGGGCTCCCCTGGAAGGGGTTCATTCAGGTCTGTTGACTGAGACTGGCCGGCCTGTGGGCTGCCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR TCA 90 bp TCCATCACGGCAGCCCACAGGCCGGCCAGTCTCAGTCAACAGACCTaGATGAACCCCTTCCAGGGGAGCCCAATTCGACTTCAGTTTCCA +
Preference number: 1 (lower is better)
Translates to: SITAAHRPASLSQQT*MNPFQGSPIRLQFP
Trigger: TGGAAACTGAAGTCGAATTGGGCTCCCCTGGAAGGGGTTCATTCAGGTCTGTTGACTGAGACTGGCCGGCCTGTGGGCTGCCGTGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 90 bp CACCCCTCATTGCCTTCAGGGTTCACTGCAACGTTACCAAACGCTTaGCCCTGTGGTGGGGAACTTCCCAGGAACTGGCTGGATCAGGAC +
Preference number: 1 (lower is better)
Translates to: HPSLPSGFTATLPNA*PCGGELPRNWLDQD
Trigger: GTCCTGATCCAGCCAGTTCCTGGGAAGTTCCCCACCACAGGGCCAAGCGTTTGGTAACGTTGCAGTGAACCCTGAAGGCAATGAGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR GCA 90 bp GGGCAGAAGCAAATTGTGTTGGAGGAACCCACACCTCCAATTTGGTaGAGCCACTGTATATCCCCCGAGTCCCCTGCTGGGAACCAGCAG +
Preference number: 1 (lower is better)
Translates to: GQKQIVLEEPTPPIW*SHCISPESPAGNQQ
Trigger: CTGCTGGTTCCCAGCAGGGGACTCGGGGGATATACAGTGGCTGCACCAAATTGGAGGTGTGGGTTCCTCCAACACAATTTGCTTCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 90 bp AACGGGCAGAAGCAAATTGTGTTGGAGGAACCCACACCTCCAATTTaGTGCAGCCACTGTATATCCCCCGAGTCCCCTGCTGGGAACCAG +
Preference number: 1 (lower is better)
Translates to: NGQKQIVLEEPTPPI*CSHCISPESPAGNQ
Trigger: CTGGTTCCCAGCAGGGGACTCGGGGGATATACAGTGGCTGCACCAAATTGGAGGTGTGGGTTCCTCCAACACAATTTGCTTCTGCCCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR TCA 90 bp CAGCAGGAAAGGGACATTGATCCAGAGAGAAAGGGACAGAGACCTTaGGAGAGGACAGAGACCCAGAGAGAGGGGAACAGAGACCTTGAG +
Preference number: 1 (lower is better)
Translates to: QQERDIDPERKGQRP*ERTETQREGNRDLE
Trigger: CTCAAGGTCTCTGTTCCCCTCTCTCTGGGTCTCTGTCCTCTCTCAAGGTCTCTGTCCCTTTCTCTCTGGATCAATGTCCCTTTCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 90 bp GACAAACCACAGTCTTCTCAAGAGCACTCTGGTTTCAAACACACCTaGTATGTACGAGGCCTCGTGATGAGCTCCCGACATGCCCACAGC +
Preference number: 1 (lower is better)
Translates to: DKPQSSQEHSGFKHT*YVRGLVMSSRHAHS
Trigger: GCTGTGGGCATGTCGGGAGCTCATCACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTCTTGAGAAGACTGTGGTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR GCA 90 bp CCTAGCAAAAGCAGGGCGGGAGGGAAAGGGATCCTCCACCTGACCTaGGAGAGCAGCTTAATGTTTCCATATAAAGGAGATACAGGGCTT +
Preference number: 1 (lower is better)
Translates to: PSKSRAGGKGILHLT*ESSLMFPYKGDTGL
Trigger: AAGCCCTGTATCTCCTTTATATGGAAACATTAAGCTGCTCTCGCAGGTCAGGTGGAGGATCCCTTTCCCTCCCGCCCTGCTTTTGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 90 bp ACATGGGGAGATGAAATTGTGAAGACAGAGAGAGGCAGAGAGAGATaGGAGAGACAGAGATGGGGGAGAGAGACAGAGACAGAGACAGAC +
Preference number: 1 (lower is better)
Translates to: TWGDEIVKTERGRER*ERQRWGRETETETD
Trigger: GTCTGTCTCTGTCTCTGTCTCTCTCCCCCATCTCTGTCTCTCCCATCTCTCTCTGCCTCTCTCTGTCTTCACAATTTCATCTCCCCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 90 bp TGGCACACTCCATTTGGAAAGAAGACCATGAGACAATGTCAAGTTTaGCACCAACTGGGTCTCCCAAAGCCCTGCACCTGCTTCCCACAA +
Preference number: 1 (lower is better)
Translates to: WHTPFGKKTMRQCQV*HQLGLPKPCTCFPQ
Trigger: TTGTGGGAAGCAGGTGCAGGGCTTTGGGAGACCCAGTTGGTGCCAAACTTGACATTGTCTCATGGTCTTCTTTCCAAATGGAGTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp GGCGGAGGAGCGAGACAGCGACTAGGGGGCAGGGAGACTGGCAGTGGGGGACGGGCCAAAACTGGGTCCTaGGCCGGACGCGGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: GGGARQRLGGRETGSGGRAKTGS*AGRGGS
Trigger: TGAGCCACCGCGTCCGGCTCAGGACCCAGTTTTGGC...CCGTCCCCCACTGCCAGTCTCCCTGCCCCCTAGTCGCTGTCTCGCTCCTCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp GGCGGAGGAGCGAGACAGCGACTAGGGGGCAGGGAGACTGGCAGTGGGGGACGGCTGGCCAAACCCAGCTaGCAGGAAGACAACGGGCAG +
Preference number: 2 (lower is better)
Translates to: GGGARQRLGGRETGSGGRLAKPS*QEDNGQ
Trigger: CTGCCCGTTGTCTTCCTGCCAGCTGGGTTTGGCCAG...CCGTCCCCCACTGCCAGTCTCCCTGCCCCCTAGTCGCTGTCTCGCTCCTCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp GAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGGCCGGCCTGGGGGCAGCTaGTGCCAAATTCCTCCCCAC +
Preference number: 2 (lower is better)
Translates to: EPSPGGHLRPTWPSSQAGRPGGS*CQIPPH
Trigger: GTGGGGAGGAATTTGGCACCAGCTGCCCCCAGGCCG...GCCAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp GGCGGAGGAGCGAGACAGCGACTAGGGGGCAGGGAGACTGGCAGTGGGGGACGGGGACGGAGGGAGAAATaGGGGGTCCAGAGTTCCCTG +
Preference number: 2 (lower is better)
Translates to: GGGARQRLGGRETGSGGRGRREK*GVQSSL
Trigger: CAGGGAACTCTGGACCCCCCATTTCTCCCTCCGTCC...CCGTCCCCCACTGCCAGTCTCCCTGCCCCCTAGTCGCTGTCTCGCTCCTCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CAA 90 bp ACACTTAGAGAAGGCAGAACGCGGCGGCACCCAGTGGGCGGAAGGTaGGGTTGCACTGGACTCCCAGTGGCCTCCCCCAGCCTAGCGGCC +
Preference number: 2 (lower is better)
Translates to: TLREGRTRRHPVGGR*GCTGLPVASPSLAA
Trigger: GGCCGCTAGGCTGGGGGAGGCCACTGGGAGTCCAGTGCAACCCAACCTTCCGCCCACTGGGTGCCGCCGCGTTCTGCCTTCTCTAAGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR GCA 90 bp CACAGTTGGGGAACAGGCTCAGGGAACGCCATGAGCTGGCCAGGCCCCCGCAGTGGCGGAAGGTTGGGTTaGACTGGACTCCCAGTGGCC +
Preference number: 2 (lower is better)
Translates to: HSWGTGSGNAMSWPGPRSGGRLG*TGLPVA
Trigger: GGCCACTGGGAGTCCAGTGCAACCCAACCTTCCGCC...ACTGCGGGGGCCTGGCCAGCTCATGGCGTTCCCTGAGCCTGTTCCCCAACTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp GGGAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGGCCTTCATAAGCTGGTaGGGGTCAGGGATGAGGCCC +
Preference number: 2 (lower is better)
Translates to: GNLHQGAICGQHGPAPRLAFISW*GSGMRP
Trigger: GGGCCTCATCCCTGACCCCCACCAGCTTATGAAGGC...CAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp GGGAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGCAGAGCAGGAGGGGATaGCTCAGCGGTGCCTTGCAT +
Preference number: 2 (lower is better)
Translates to: GNLHQGAICGQHGPAPRLQSRRG*LSGALH
Trigger: ATGCAAGGCACCGCTGAGCCATCCCCTCCTGCTCTG...CAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR GCA 90 bp GTATGTACGAGGCCTCGTGATGAGCTCCCGACATGCCCACAGCCCCCACTGGACCACCAGGGGGCCATCTaGGGCCAACATGGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: VCTRPRDELPTCPQPPLDHQGAI*GQHGPA
Trigger: AGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTG...GTCCAGTGGGGGCTGTGGGCATGTCGGGAGCTCATCACGAGGCCTCGTACATAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp ACTGGGGCTGAGGTTAGTCCCTTGTCGCAGGTCTCTCAGCCAGTGGGGAGAGGACGCGGCGGCACCCAGTaGGCGGAAGGTTGGGTTGCA +
Preference number: 2 (lower is better)
Translates to: TGAEVSPLSQVSQPVGRGRGGTQ*AEGWVA
Trigger: TGCAACCCAACCTTCCGCCCACTGGGTGCCGCCGCG...TCCTCTCCCCACTGGCTGAGAGACCTGCGACAAGGGACTAACCTCAGCCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp GGGAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGCTCAGTCAACAGACCTaGATGAACCCCTTCCAGGGG +
Preference number: 2 (lower is better)
Translates to: GNLHQGAICGQHGPAPRLLSQQT*MNPFQG
Trigger: CCCCTGGAAGGGGTTCATTCAGGTCTGTTGACTGAG...CAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp GGCCCTGTGGTGGGGAACTTCCCAGGAACTGGCTGGATCAGGACAAACCATTCCGAGGCACGTACCTGTTaGGGCGGCCCACCCCCATGC +
Preference number: 2 (lower is better)
Translates to: GPVVGNFPGTGWIRTNHSEARTC*GGPPPC
Trigger: GCATGGGGGTGGGCCGCCCCAACAGGTACGTGCCTC...GGAATGGTTTGTCCTGATCCAGCCAGTTCCTGGGAAGTTCCCCACCACAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp CAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAACCCACTCCCCACCTACTaGTGGGGGCTGGACAGCAGG +
Preference number: 2 (lower is better)
Translates to: QSHLSPVRQTRCLLPKANPLPTY*WGLDSR
Trigger: CCTGCTGTCCAGCCCCCACCAGTAGGTGGGGAGTGG...GTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp TCCCACAACCACGCAGGCAGCCTGGCCATTCGCGAGGGTTCATTAGGCCCACTTCATCTGCGGCCAACATaGCCCAGCTCCCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: SHNHAGSLAIREGSLGPLHLRPT*PSSQAG
Trigger: GCCAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATG...AAGTGGGCCTAATGAACCCTCGCGAATGGCCAGGCTGCCTGCGTGGTTGTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp GGGAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGAACCGAGTTCTTTGGTaGGAGGGGTCACTGGATCAG +
Preference number: 2 (lower is better)
Translates to: GNLHQGAICGQHGPAPRLNRVLW*EGSLDQ
Trigger: CTGATCCAGTGACCCCTCTCACCAAAGAACTCGGTT...CAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp CCAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAAACCAGCAGCCAAAACTaGGTCCTGAGCCGGACGCGG +
Preference number: 2 (lower is better)
Translates to: PVPPQPREADPLSTSQSQTSSQN*VLSRTR
Trigger: CCGCGTCCGGCTCAGGACCCAGTTTTGGCTGCTGGT...TTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp CACAGTTGGGGAACAGGCTCAGGGAACGCCATGAGCTGGCCAGGCCCCCGCAGTCTCGGAGTCCACAGATaGATCAGAGGCTGGATGGAG +
Preference number: 2 (lower is better)
Translates to: HSWGTGSGNAMSWPGPRSLGVHR*IRGWME
Trigger: CTCCATCCAGCCTCTGATCCATCTGTGGACTCCGAG...ACTGCGGGGGCCTGGCCAGCTCATGGCGTTCCCTGAGCCTGTTCCCCAACTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp GTATGTACGAGGCCTCGTGATGAGCTCCCGACATGCCCACAGCCCCCACTGGACCAGCGGTGCCTTGCATaGAGGCACGTACCTGTTGGG +
Preference number: 2 (lower is better)
Translates to: VCTRPRDELPTCPQPPLDQRCLA*RHVPVG
Trigger: CCCAACAGGTACGTGCCTCCATGCAAGGCACCGCTG...GTCCAGTGGGGGCTGTGGGCATGTCGGGAGCTCATCACGAGGCCTCGTACATAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp CAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAACCTCCCCACCTACTGGTaGGGGCTGGACAGCAGGTTG +
Preference number: 2 (lower is better)
Translates to: QSHLSPVRQTRCLLPKANLPTYW*GLDSRL
Trigger: CAACCTGCTGTCCAGCCCCCACCAGTAGGTGGGGAG...GTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CAA 90 bp CCTCGAAATCCTCCAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTaGTCTACTTCCCAAAGCCAACGGGAACCTTCACCAGGGGGCCAT +
Preference number: 2 (lower is better)
Translates to: PRNPPVPPQPREADP*STSQSQREPSPGGH
Trigger: ATGGCCCCCTGGTGAAGGTTCCCGTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTGGAGGATTTCGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp CACAGTTGGGGAACAGGCTCAGGGAACGCCATGAGCTGGCCAGGCCCCCGCAGTCCTCAGGCCTCTTCCTaGTCCTTTATTGCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: HSWGTGSGNAMSWPGPRSPQASS*SFIAAQ
Trigger: CTGAGCAGCAATAAAGGACCAGGAAGAGGCCTGAGG...ACTGCGGGGGCCTGGCCAGCTCATGGCGTTCCCTGAGCCTGTTCCCCAACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp CACCCCCACTTGCCCATCTCTCACCAAAGCCCTTTGATGAAGGGACCTGGCTTTAGGGGGCAGGGAGACTaGCAGTGGGGGACGGGAGAC +
Preference number: 2 (lower is better)
Translates to: HPHLPISHQSPLMKGPGFRGQGD*QWGTGD
Trigger: GTCTCCCGTCCCCCACTGCCAGTCTCCCTGCCCCCT...AAAGCCAGGTCCCTTCATCAAAGGGCTTTGGTGAGAGATGGGCAAGTGGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp CACCCCCACTTGCCCATCTCTCACCAAAGCCCTTTGATGAAGGGACCTGGCTTTGCTGCTCAGGAGCCCTaGCCTTCCTCCCGACACAGC +
Preference number: 2 (lower is better)
Translates to: HPHLPISHQSPLMKGPGFAAQEP*PSSRHS
Trigger: GCTGTGTCGGGAGGAAGGTCAGGGCTCCTGAGCAGC...AAAGCCAGGTCCCTTCATCAAAGGGCTTTGGTGAGAGATGGGCAAGTGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp GGCCCTGTGGTGGGGAACTTCCCAGGAACTGGCTGGATCAGGACAAACCATTCCAGCCTCTGTGGGTGCTaGGGGGCTGTAGTCTGTCCT +
Preference number: 2 (lower is better)
Translates to: GPVVGNFPGTGWIRTNHSSLCGC*GAVVCP
Trigger: AGGACAGACTACAGCCCCTCAGCACCCACAGAGGCT...GGAATGGTTTGTCCTGATCCAGCCAGTTCCTGGGAAGTTCCCCACCACAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR GCA 90 bp CAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAACCCAAGATCGTGCTACTaGACTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: QSHLSPVRQTRCLLPKANPRSCY*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTAGCACGATCTTGG...GTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR GCA 90 bp TCCCACAACCACGCAGGCAGCCTGGCCATTCGCGAGGGTTCATTAGGCCCACTTCCTCTCACCCCCACTTaGCCATCTCTCACCAAAGCC +
Preference number: 2 (lower is better)
Translates to: SHNHAGSLAIREGSLGPLPLTPT*PSLTKA
Trigger: GGCTTTGGTGAGAGATGGGCAAGTGGGGGTGAGAGG...AAGTGGGCCTAATGAACCCTCGCGAATGGCCAGGCTGCCTGCGTGGTTGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CAA 90 bp AGGGTGGACCAAAGGAAAGGGCTGGGCATGGACCCGCACCCCTCATaGCCTTCAGGGTTCACTGCAACGTTACCAAACGCTTGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: RVDQRKGLGMDPHPS*PSGFTATLPNAWPC
Trigger: ACAGGGCCAAGCGTTTGGTAACGTTGCAGTGAACCCTGAAGGCAATGAGGGGTGCGGGTCCATGCCCAGCCCTTTCCTTTGGTCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp GAAAAGAAATGGAGGGAATCGCAGCAGCCTGTCAGGGTGGACCAAAGGAAAGGGCCCACCTCAGCCCCGTaGGGCAGACCCGTTGTCTAC +
Preference number: 2 (lower is better)
Translates to: EKKWRESQQPVRVDQRKGPTSAP*GRPVVY
Trigger: GTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGG...CCCTTTCCTTTGGTCCACCCTGACAGGCTGCTGCGATTCCCTCCATTTCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR GCA 90 bp GTATGTACGAGGCCTCGTGATGAGCTCCCGACATGCCCACAGCCCCCACTGGACGGGGTGTTGAGAGGGTaGCCCAAGAAAAAGTACAGG +
Preference number: 2 (lower is better)
Translates to: VCTRPRDELPTCPQPPLDGVLRG*PKKKYR
Trigger: CCTGTACTTTTTCTTGGGGCACCCTCTCAACACCCC...GTCCAGTGGGGGCTGTGGGCATGTCGGGAGCTCATCACGAGGCCTCGTACATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR GCA 90 bp GTATGTACGAGGCCTCGTGATGAGCTCCCGACATGCCCACAGCCCCCACTGGACTCCTTCCCAGAGTTCTaGCCTCGAAATCCTCCAGTC +
Preference number: 2 (lower is better)
Translates to: VCTRPRDELPTCPQPPLDSFPEF*PRNPPV
Trigger: GACTGGAGGATTTCGAGGGCAGAACTCTGGGAAGGA...GTCCAGTGGGGGCTGTGGGCATGTCGGGAGCTCATCACGAGGCCTCGTACATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp CCAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAAGTCTCTGGGTGGGAGTaGTCTTACAGAGCCCTGGTT +
Preference number: 2 (lower is better)
Translates to: PVPPQPREADPLSTSQSQVSGWE*SYRALV
Trigger: AACCAGGGCTCTGTAAGACCACTCCCACCCAGAGAC...TTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp GAAAAGAAATGGAGGGAATCGCAGCAGCCTGTCAGGGTGGACCAAAGGAAAGGGCCCCACTGCTCACCTTaGCCGCTCAGGATGCCGGGA +
Preference number: 2 (lower is better)
Translates to: EKKWRESQQPVRVDQRKGPHCSP*PLRMPG
Trigger: TCCCGGCATCCTGAGCGGCCAAGGTGAGCAGTGGGG...CCCTTTCCTTTGGTCCACCCTGACAGGCTGCTGCGATTCCCTCCATTTCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CAA 90 bp GCACCCCTCATTGCCTTCAGGGTTCACTGCAACGTTACCAAACGCTaGGCCCTGTGGTGGGGAACTTCCCAGGAACTGGCTGGATCAGGA +
Preference number: 2 (lower is better)
Translates to: APLIAFRVHCNVTKR*ALWWGTSQELAGSG
Trigger: TCCTGATCCAGCCAGTTCCTGGGAAGTTCCCCACCACAGGGCCAAGCGTTTGGTAACGTTGCAGTGAACCCTGAAGGCAATGAGGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp GTATGTACGAGGCCTCGTGATGAGCTCCCGACATGCCCACAGCCCCCACTGGACCAGAGTTCCCTGAGATaGAGCCTTCATAAGCTGGTG +
Preference number: 2 (lower is better)
Translates to: VCTRPRDELPTCPQPPLDQSSLR*SLHKLV
Trigger: CACCAGCTTATGAAGGCTTCATCTCAGGGAACTCTG...GTCCAGTGGGGGCTGTGGGCATGTCGGGAGCTCATCACGAGGCCTCGTACATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp CAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAACGGGTCCAGAGTTCCCTaGGATGAAGCCTTCATAAGC +
Preference number: 2 (lower is better)
Translates to: QSHLSPVRQTRCLLPKANGSRVP*DEAFIS
Trigger: GCTTATGAAGGCTTCATCTCAGGGAACTCTGGACCC...GTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp CAGGGGCTTCTTGGCAGGGCCTGGCACACTCCATTTGGAAAGAAGACCATGAGAGGGGACGGGAGACTCTaGAAGAGGGGGACACAGAGA +
Preference number: 2 (lower is better)
Translates to: QGLLGRAWHTPFGKKTMRGDGRL*KRGTQR
Trigger: TCTCTGTGTCCCCCTCTTTCAGAGTCTCCCGTCCCC...TCTCATGGTCTTCTTTCCAAATGGAGTGTGCCAGGCCCTGCCAAGAAGCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR GCA 90 bp ACTGGGGCTGAGGTTAGTCCCTTGTCGCAGGTCTCTCAGCCAGTGGGGAGAGGACTGGTCCTTTATTGCTaGTCAGGAGCCCTGACCTTC +
Preference number: 2 (lower is better)
Translates to: TGAEVSPLSQVSQPVGRGLVLYC*SGALTF
Trigger: GAAGGTCAGGGCTCCTGAGCAGCAATAAAGGACCAG...TCCTCTCCCCACTGGCTGAGAGACCTGCGACAAGGGACTAACCTCAGCCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp ACTGGGGCTGAGGTTAGTCCCTTGTCGCAGGTCTCTCAGCCAGTGGGGAGAGGAGGGACACAGGTCAAATaGGTCACAGCTGACAGGAAG +
Preference number: 2 (lower is better)
Translates to: TGAEVSPLSQVSQPVGRGGTQVK*VTADRK
Trigger: CTTCCTGTCAGCTGTGACCCATTTGACCTGTGTCCC...TCCTCTCCCCACTGGCTGAGAGACCTGCGACAAGGGACTAACCTCAGCCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp CAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAACTTCCTCATAGGGCTGTaGCCAAAGGACCAGAGTCTC +
Preference number: 2 (lower is better)
Translates to: QSHLSPVRQTRCLLPKANFLIGL*PKDQSL
Trigger: GAGACTCTGGTCCTTTGGCCACAGCCCTATGAGGAA...GTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp GTATGTACGAGGCCTCGTGATGAGCTCCCGACATGCCCACAGCCCCCACTGGACTGCATAAAATGGGGATaGGGTGAGAGTTGGAGGCAC +
Preference number: 2 (lower is better)
Translates to: VCTRPRDELPTCPQPPLDCIKWG*GESWRH
Trigger: GTGCCTCCAACTCTCACCCCATCCCCATTTTATGCA...GTCCAGTGGGGGCTGTGGGCATGTCGGGAGCTCATCACGAGGCCTCGTACATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp GGAACCCACACCTCCAATTTGGTGCAGCCACTGTATATCCCCCGAGTCCCCTGCCAAATGGGTCACAGCTaGCAGGAAGGAATCCGACAC +
Preference number: 2 (lower is better)
Translates to: GTHTSNLVQPLYIPRVPCQMGHS*QEGIRH
Trigger: GTGTCGGATTCCTTCCTGTCAGCTGTGACCCATTTG...GCAGGGGACTCGGGGGATATACAGTGGCTGCACCAAATTGGAGGTGTGGGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp GGCCCTGTGGTGGGGAACTTCCCAGGAACTGGCTGGATCAGGACAAACCATTCCAGTGTACCCCAACCTTaGCTCTATCTCACCCCTGAC +
Preference number: 2 (lower is better)
Translates to: GPVVGNFPGTGWIRTNHSSVPQP*LYLTPD
Trigger: GTCAGGGGTGAGATAGAGTCAAGGTTGGGGTACACT...GGAATGGTTTGTCCTGATCCAGCCAGTTCCTGGGAAGTTCCCCACCACAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR GCA 90 bp GAAAAGAAATGGAGGGAATCGCAGCAGCCTGTCAGGGTGGACCAAAGGAAAGGGATCCCCCGAGTCCCCTaGTGGGAACCAGCAGCCAAA +
Preference number: 2 (lower is better)
Translates to: EKKWRESQQPVRVDQRKGIPRVP*WEPAAK
Trigger: TTTGGCTGCTGGTTCCCAGCAGGGGACTCGGGGGAT...CCCTTTCCTTTGGTCCACCCTGACAGGCTGCTGCGATTCCCTCCATTTCTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR GCA 90 bp TCCCACAACCACGCAGGCAGCCTGGCCATTCGCGAGGGTTCATTAGGCCCACTTACACCTCCAATTTGGTaGAGCCACTGTATATCCCCC +
Preference number: 2 (lower is better)
Translates to: SHNHAGSLAIREGSLGPLTPPIW*SHCISP
Trigger: GGGGGATATACAGTGGCTGCACCAAATTGGAGGTGT...AAGTGGGCCTAATGAACCCTCGCGAATGGCCAGGCTGCCTGCGTGGTTGTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp GAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGATGAGCTCCCAGTGGGCGGAAGGTTaGGTTGCACTGGACTCCCAG +
Preference number: 2 (lower is better)
Translates to: EHSGFKHTWYVRGLVMSSQWAEG*VALDSQ
Trigger: CTGGGAGTCCAGTGCAACCCAACCTTCCGCCCACTG...GGAGCTCATCACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp GAAAAGAAATGGAGGGAATCGCAGCAGCCTGTCAGGGTGGACCAAAGGAAAGGGGCTGTAGTCTGTCCTTaGTCCCAGGGGCCGTGTGAC +
Preference number: 2 (lower is better)
Translates to: EKKWRESQQPVRVDQRKGAVVCP*SQGPCD
Trigger: GTCACACGGCCCCTGGGACCAAGGACAGACTACAGC...CCCTTTCCTTTGGTCCACCCTGACAGGCTGCTGCGATTCCCTCCATTTCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp CAGGGGCTTCTTGGCAGGGCCTGGCACACTCCATTTGGAAAGAAGACCATGAGACAGTGGGGAGAGGAGTaGCAAAAGCTAGCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: QGLLGRAWHTPFGKKTMRQWGEE*QKLASH
Trigger: GTGGGAGGCTAGCTTTTGCCACTCCTCTCCCCACTG...TCTCATGGTCTTCTTTCCAAATGGAGTGTGCCAGGCCCTGCCAAGAAGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CAA 90 bp CAACGGGCAGAAGCAAATTGTGTTGGAGGAACCCACACCTCCAATTaGGTGCAGCCACTGTATATCCCCCGAGTCCCCTGCTGGGAACCA +
Preference number: 2 (lower is better)
Translates to: QRAEANCVGGTHTSN*VQPLYIPRVPCWEP
Trigger: TGGTTCCCAGCAGGGGACTCGGGGGATATACAGTGGCTGCACCAAATTGGAGGTGTGGGTTCCTCCAACACAATTTGCTTCTGCCCGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp ACTGGGGCTGAGGTTAGTCCCTTGTCGCAGGTCTCTCAGCCAGTGGGGAGAGGAGGCGGACAGATCACTTaGGATCAAGAATTTGAGACC +
Preference number: 2 (lower is better)
Translates to: TGAEVSPLSQVSQPVGRGGGQIT*DQEFET
Trigger: GGTCTCAAATTCTTGATCTCAAGTGATCTGTCCGCC...TCCTCTCCCCACTGGCTGAGAGACCTGCGACAAGGGACTAACCTCAGCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp ACTGGGGCTGAGGTTAGTCCCTTGTCGCAGGTCTCTCAGCCAGTGGGGAGAGGATTCACTAAGCCAGAGTaGGTTCCAGATGGAAGGACA +
Preference number: 2 (lower is better)
Translates to: TGAEVSPLSQVSQPVGRGFTKPE*VPDGRT
Trigger: TGTCCTTCCATCTGGAACTCACTCTGGCTTAGTGAA...TCCTCTCCCCACTGGCTGAGAGACCTGCGACAAGGGACTAACCTCAGCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp GAAAAGAAATGGAGGGAATCGCAGCAGCCTGTCAGGGTGGACCAAAGGAAAGGGCAGGAGGAGGGGTGTTaGGAGGGTGCCCCAAGAAAA +
Preference number: 2 (lower is better)
Translates to: EKKWRESQQPVRVDQRKGQEEGC*EGAPRK
Trigger: TTTTCTTGGGGCACCCTCTCAACACCCCTCCTCCTG...CCCTTTCCTTTGGTCCACCCTGACAGGCTGCTGCGATTCCCTCCATTTCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp GAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGATGAGCTCCGGTGAGAGGGGTCACTaGATCAGAGCCAGGCCTTCT +
Preference number: 2 (lower is better)
Translates to: EHSGFKHTWYVRGLVMSSGERGH*IRARPS
Trigger: AGAAGGCCTGGCTCTGATCCAGTGACCCCTCTCACC...GGAGCTCATCACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp CAGGGGCTTCTTGGCAGGGCCTGGCACACTCCATTTGGAAAGAAGACCATGAGAGGCCACACAAGTCTCTaGGTGGGAGTGGTCTTACAG +
Preference number: 2 (lower is better)
Translates to: QGLLGRAWHTPFGKKTMRGHTSL*VGVVLQ
Trigger: CTGTAAGACCACTCCCACCCAGAGACTTGTGTGGCC...TCTCATGGTCTTCTTTCCAAATGGAGTGTGCCAGGCCCTGCCAAGAAGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp CAGGGGCTTCTTGGCAGGGCCTGGCACACTCCATTTGGAAAGAAGACCATGAGAAGGTCTCTCAGCCAGTaGGGAGAGGAGTGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: QGLLGRAWHTPFGKKTMRRSLSQ*GEEWQK
Trigger: CTTTTGCCACTCCTCTCCCCACTGGCTGAGAGACCT...TCTCATGGTCTTCTTTCCAAATGGAGTGTGCCAGGCCCTGCCAAGAAGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CAA 90 bp TCTGGGTGGGAGTGGTCTTACAGAGCCCTGGTTAAACCGAGTTCTTaGGTGAGAGGGGTCACTGGATCAGAGCCAGGCCTTCTAGAGAAC +
Preference number: 2 (lower is better)
Translates to: SGWEWSYRALVKPSS*VRGVTGSEPGLLEN
Trigger: GTTCTCTAGAAGGCCTGGCTCTGATCCAGTGACCCCTCTCACCAAAGAACTCGGTTTAACCAGGGCTCTGTAAGACCACTCCCACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CAA 90 bp TCCTGGCCAAACCCAGCTGGCAGGAAGACAACGGGCAGAAGCAAATaGTGTTGGAGGAACCCACACCTCCAATTTGGTGCAGCCACTGTA +
Preference number: 2 (lower is better)
Translates to: SWPNPAGRKTTGRSK*CWRNPHLQFGAATV
Trigger: TACAGTGGCTGCACCAAATTGGAGGTGTGGGTTCCTCCAACACAATTTGCTTCTGCCCGTTGTCTTCCTGCCAGCTGGGTTTGGCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR GCA 90 bp GGCCCTGTGGTGGGGAACTTCCCAGGAACTGGCTGGATCAGGACAAACCATTCCATCCTCCACCTGACCTaGGAGAGCAGCTTAATGTTT +
Preference number: 2 (lower is better)
Translates to: GPVVGNFPGTGWIRTNHSILHLT*ESSLMF
Trigger: AAACATTAAGCTGCTCTCGCAGGTCAGGTGGAGGAT...GGAATGGTTTGTCCTGATCCAGCCAGTTCCTGGGAAGTTCCCCACCACAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CAA 90 bp GCCAAACCCAGCTGGCAGGAAGACAACGGGCAGAAGCAAATTGTGTaGGAGGAACCCACACCTCCAATTTGGTGCAGCCACTGTATATCC +
Preference number: 2 (lower is better)
Translates to: AKPSWQEDNGQKQIV*EEPTPPIWCSHCIS
Trigger: GGATATACAGTGGCTGCACCAAATTGGAGGTGTGGGTTCCTCCAACACAATTTGCTTCTGCCCGTTGTCTTCCTGCCAGCTGGGTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp TCTTCTCAAGAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGGTCAACAGACCTGAATaGACCCCTTCCAGGGGAGCC +
Preference number: 2 (lower is better)
Translates to: SSQEHSGFKHTWYVRGLVVNRPE*TPSRGA
Trigger: GGCTCCCCTGGAAGGGGTTCATTCAGGTCTGTTGAC...CACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTCTTGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp CAGGGGCTTCTTGGCAGGGCCTGGCACACTCCATTTGGAAAGAAGACCATGAGAGGGGAGATGAAATTGTaGAGACAGAGAGAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: QGLLGRAWHTPFGKKTMRGEMKL*RQREAE
Trigger: CTCTGCCTCTCTCTGTCTTCACAATTTCATCTCCCC...TCTCATGGTCTTCTTTCCAAATGGAGTGTGCCAGGCCCTGCCAAGAAGCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CCA 90 bp ATCCTGGCCAAACCCAGCTGGCAGGAAGACAACGGGCAGAAGCAAATTGTGTTGACACAAGTCTCTGGGTaGGAGTGGTCTTACAGAGCC +
Preference number: 2 (lower is better)
Translates to: ILAKPSWQEDNGQKQIVLTQVSG*EWSYRA
Trigger: GGCTCTGTAAGACCACTCCCACCCAGAGACTTGTGT...CAACACAATTTGCTTCTGCCCGTTGTCTTCCTGCCAGCTGGGTTTGGCCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp CAGGGCTTAAGGTGCTTCAACTTCGTGTCAAAGTCACTGTCTAATCTGAGGCCAAGGCGGAGGTTGCAGTaGGCCAAGATCGTGCTACTG +
Preference number: 2 (lower is better)
Translates to: QGLRCFNFVSKSLSNLRPRRRLQ*AKIVLL
Trigger: CAGTAGCACGATCTTGGCTCACTGCAACCTCCGCCT...TGGCCTCAGATTAGACAGTGACTTTGACACGAAGTTGAAGCACCTTAAGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR TCA 90 bp GAAAAGAAATGGAGGGAATCGCAGCAGCCTGTCAGGGTGGACCAAAGGAAAGGGAGCTACCTGGGAGACTaGGCTGAGAGAATCACTTTA +
Preference number: 2 (lower is better)
Translates to: EKKWRESQQPVRVDQRKGSYLGD*AERITL
Trigger: TAAAGTGATTCTCTCAGCTCAGTCTCCCAGGTAGCT...CCCTTTCCTTTGGTCCACCCTGACAGGCTGCTGCGATTCCCTCCATTTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 72 bp GCGGCGGCACCCAGTGGGCGGAAGGTTGGGTTGCACTaGACTCCCAGTGGCCTCCCCCAGCCTAGCGGCCTG +
Preference number: 3 (lower is better)
Translates to: AAAPSGRKVGLH*TPSGLPQPSGL
Trigger: CAGGCCGCTAGGCTGGGGGAGGCCACTGGGAGTCCAGTGCAACCCAACCTTCCGCCCACTGGGTGCCGCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 72 bp GGCTCAGCGGTGCCTTGCATGGAGGCACGTACCTGTTaGGGCGGCCCACCCCCATGCCCTCCGCTGGGGGCT +
Preference number: 3 (lower is better)
Translates to: GSAVPCMEARTC*GGPPPCPPLGA
Trigger: AGCCCCCAGCGGAGGGCATGGGGGTGGGCCGCCCCAACAGGTACGTGCCTCCATGCAAGGCACCGCTGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR GCA 72 bp AGAACGCGGCGGCACCCAGTGGGCGGAAGGTTGGGTTaGACTGGACTCCCAGTGGCCTCCCCCAGCCTAGCG +
Preference number: 3 (lower is better)
Translates to: RTRRHPVGGRLG*TGLPVASPSLA
Trigger: CGCTAGGCTGGGGGAGGCCACTGGGAGTCCAGTGCAACCCAACCTTCCGCCCACTGGGTGCCGCCGCGTTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR GCA 72 bp CGCAGCAGAGCAGGAGGGGATGGCTCAGCGGTGCCTTaGATGGAGGCACGTACCTGTTGGGGCGGCCCACCC +
Preference number: 3 (lower is better)
Translates to: RSRAGGDGSAVP*MEARTCWGGPP
Trigger: GGGTGGGCCGCCCCAACAGGTACGTGCCTCCATGCAAGGCACCGCTGAGCCATCCCCTCCTGCTCTGCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR GCA 72 bp GGCGACGCAGCAGAGCAGGAGGGGATGGCTCAGCGGTaGCTTGCATGGAGGCACGTACCTGTTGGGGCGGCC +
Preference number: 3 (lower is better)
Translates to: GDAAEQEGMAQR*LAWRHVPVGAA
Trigger: GGCCGCCCCAACAGGTACGTGCCTCCATGCAAGGCACCGCTGAGCCATCCCCTCCTGCTCTGCTGCGTCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 72 bp AAGGCAGAACGCGGCGGCACCCAGTGGGCGGAAGGTTaGGTTGCACTGGACTCCCAGTGGCCTCCCCCAGCC +
Preference number: 3 (lower is better)
Translates to: KAERGGTQWAEG*VALDSQWPPPA
Trigger: GGCTGGGGGAGGCCACTGGGAGTCCAGTGCAACCCAACCTTCCGCCCACTGGGTGCCGCCGCGTTCTGCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR GCA 72 bp CTCAGGGAACGCCATGAGCTGGCCAGGCCCCCGCAGTaGCAGGGGGAATGCTGGTTGGGTCCTAAGCCTTTC +
Preference number: 3 (lower is better)
Translates to: LRERHELARPPQ*QGECWLGPKPF
Trigger: GAAAGGCTTAGGACCCAACCAGCATTCCCCCTGGCACTGCGGGGGCCTGGCCAGCTCATGGCGTTCCCTGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 72 bp GGACACTTAGAGAAGGCAGAACGCGGCGGCACCCAGTaGGCGGAAGGTTGGGTTGCACTGGACTCCCAGTGG +
Preference number: 3 (lower is better)
Translates to: GHLEKAERGGTQ*AEGWVALDSQW
Trigger: CCACTGGGAGTCCAGTGCAACCCAACCTTCCGCCCACTGGGTGCCGCCGCGTTCTGCCTTCTCTAAGTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR GCA 72 bp CATGAGCTGGCCAGGCCCCCGCAGTGCCAGGGGGAATaGTGGTTGGGTCCTAAGCCTTTCTTTCCTTCCCAG +
Preference number: 3 (lower is better)
Translates to: HELARPPQCQGE*WLGPKPFFPSQ
Trigger: CTGGGAAGGAAAGAAAGGCTTAGGACCCAACCAGCATTCCCCCTGGCACTGCGGGGGCCTGGCCAGCTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR GCA 72 bp GTTTGGCACCAACTGGGTCTCCCAAAGCCCTGCACCTaGTTCCCACAACCACGCAGGCAGCCTGGCCATTCG +
Preference number: 3 (lower is better)
Translates to: VWHQLGLPKPCT*FPQPRRQPGHS
Trigger: CGAATGGCCAGGCTGCCTGCGTGGTTGTGGGAAGCAGGTGCAGGGCTTTGGGAGACCCAGTTGGTGCCAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 72 bp AGCCCCCACTGGACTCTCAGACCCCACTGCTCACCTTaGCCGCTCAGGATGCCGGGAGGTGAAGATCATCAC +
Preference number: 3 (lower is better)
Translates to: SPHWTLRPHCSP*PLRMPGGEDHH
Trigger: GTGATGATCTTCACCTCCCGGCATCCTGAGCGGCCAAGGTGAGCAGTGGGGTCTGAGAGTCCAGTGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CAA 90 bp CAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAACGCAGGAGGAGGGGTGTaGAGAGGGTGCCCCAAGAAA +
Preference number: 3 (lower is better)
Translates to: QSHLSPVRQTRCLLPKANAGGGV*RGCPKK
Trigger: TTTCTTGGGGCACCCTCTCAACACCCCTCCTCCTGC...GTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 72 bp TGGCCAGGCCCCCGCAGTGCCAGGGGGAATGCTGGTTaGGTCCTAAGCCTTTCTTTCCTTCCCAGAGTTCTG +
Preference number: 3 (lower is better)
Translates to: WPGPRSARGNAG*VLSLSFLPRVL
Trigger: CAGAACTCTGGGAAGGAAAGAAAGGCTTAGGACCCAACCAGCATTCCCCCTGGCACTGCGGGGGCCTGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR TCA 72 bp GCAGCCCACAGGCCGGCCAGTCTCAGTCAACAGACCTaGATGAACCCCTTCCAGGGGAGCCCAATTCGACTT +
Preference number: 3 (lower is better)
Translates to: AAHRPASLSQQT*MNPFQGSPIRL
Trigger: AAGTCGAATTGGGCTCCCCTGGAAGGGGTTCATTCAGGTCTGTTGACTGAGACTGGCCGGCCTGTGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR TCA 72 bp CCACTGCTCACCTTGGCCGCTCAGGATGCCGGGAGGTaGAGATCATCACCCCCTTTCACAGTTGGGGAACAG +
Preference number: 3 (lower is better)
Translates to: PLLTLAAQDAGR*RSSPPFTVGEQ
Trigger: CTGTTCCCCAACTGTGAAAGGGGGTGATGATCTTCACCTCCCGGCATCCTGAGCGGCCAAGGTGAGCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR GCA 72 bp CATGGACCCGCACCCCTCATTGCCTTCAGGGTTCACTaGAACGTTACCAAACGCTTGGCCCTGTGGTGGGGA +
Preference number: 3 (lower is better)
Translates to: HGPAPLIAFRVH*NVTKRLALWWG
Trigger: TCCCCACCACAGGGCCAAGCGTTTGGTAACGTTGCAGTGAACCCTGAAGGCAATGAGGGGTGCGGGTCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 72 bp CTGAGGTTAGTCCCTTGTCGCAGGTCTCTCAGCCAGTaGGGAGAGGAGTGGCAAAAGCTAGCCTCCCACCCA +
Preference number: 3 (lower is better)
Translates to: LRLVPCRRSLSQ*GEEWQKLASHP
Trigger: TGGGTGGGAGGCTAGCTTTTGCCACTCCTCTCCCCACTGGCTGAGAGACCTGCGACAAGGGACTAACCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR TCA 72 bp CCCACAGGCCGGCCAGTCTCAGTCAACAGACCTGAATaGACCCCTTCCAGGGGAGCCCAATTCGACTTCAGT +
Preference number: 3 (lower is better)
Translates to: PTGRPVSVNRPE*TPSRGAQFDFS
Trigger: ACTGAAGTCGAATTGGGCTCCCCTGGAAGGGGTTCATTCAGGTCTGTTGACTGAGACTGGCCGGCCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 72 bp AAAGGGGAAATAGGCTCGTTGCCCAAGGGGGCGGCCTaGAGGTCAACATCAGGATGCAGCATCTACACCTGC +
Preference number: 3 (lower is better)
Translates to: KGEIGSLPKGAA*RSTSGCSIYTC
Trigger: GCAGGTGTAGATGCTGCATCCTGATGTTGACCTCCAGGCCGCCCCCTTGGGCAACGAGCCTATTTCCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 72 bp AAAAGAAATGGAGGGAATCGCAGCAGCCTGTCAGGGTaGACCAAAGGAAAGGGCTGGGCATGGACCCGCACC +
Preference number: 3 (lower is better)
Translates to: KRNGGNRSSLSG*TKGKGWAWTRT
Trigger: GGTGCGGGTCCATGCCCAGCCCTTTCCTTTGGTCCACCCTGACAGGCTGCTGCGATTCCCTCCATTTCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CAA 90 bp TCCCACAACCACGCAGGCAGCCTGGCCATTCGCGAGGGTTCATTAGGCCCACTTGTTAAACCGAGTTCTTaGGTGAGAGGGGTCACTGGA +
Preference number: 3 (lower is better)
Translates to: SHNHAGSLAIREGSLGPLVKPSS*VRGVTG
Trigger: TCCAGTGACCCCTCTCACCAAAGAACTCGGTTTAAC...AAGTGGGCCTAATGAACCCTCGCGAATGGCCAGGCTGCCTGCGTGGTTGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 72 bp TTGCCTTCAGGGTTCACTGCAACGTTACCAAACGCTTaGCCCTGTGGTGGGGAACTTCCCAGGAACTGGCTG +
Preference number: 3 (lower is better)
Translates to: LPSGFTATLPNA*PCGGELPRNWL
Trigger: CAGCCAGTTCCTGGGAAGTTCCCCACCACAGGGCCAAGCGTTTGGTAACGTTGCAGTGAACCCTGAAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR GCA 72 bp CAAATTGTGTTGGAGGAACCCACACCTCCAATTTGGTaGAGCCACTGTATATCCCCCGAGTCCCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: QIVLEEPTPPIW*SHCISPESPAG
Trigger: CCCAGCAGGGGACTCGGGGGATATACAGTGGCTGCACCAAATTGGAGGTGTGGGTTCCTCCAACACAATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR GCA 72 bp AAATACACCTCAGGCCTCTTCCTGGTCCTTTATTGCTaGTCAGGAGCCCTGACCTTCCTCCCGACACAGCAC +
Preference number: 3 (lower is better)
Translates to: KYTSGLFLVLYC*SGALTFLPTQH
Trigger: GTGCTGTGTCGGGAGGAAGGTCAGGGCTCCTGAGCAGCAATAAAGGACCAGGAAGAGGCCTGAGGTGTATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR GCA 72 bp CTCAAATACACCTCAGGCCTCTTCCTGGTCCTTTATTaGTGCTCAGGAGCCCTGACCTTCCTCCCGACACAG +
Preference number: 3 (lower is better)
Translates to: LKYTSGLFLVLY*CSGALTFLPTQ
Trigger: CTGTGTCGGGAGGAAGGTCAGGGCTCCTGAGCAGCAATAAAGGACCAGGAAGAGGCCTGAGGTGTATTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR GCA 72 bp AAAGGAAAGGGCTGGGCATGGACCCGCACCCCTCATTaGCTTCAGGGTTCACTGCAACGTTACCAAACGCTT +
Preference number: 3 (lower is better)
Translates to: KGKGWAWTRTPH*LQGSLQRYQTL
Trigger: AAGCGTTTGGTAACGTTGCAGTGAACCCTGAAGGCAATGAGGGGTGCGGGTCCATGCCCAGCCCTTTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 72 bp AGGCCACACCAGGCCACACAAGTCTCTGGGTGGGAGTaGTCTTACAGAGCCCTGGTTAAACCGAGTTCTTTG +
Preference number: 3 (lower is better)
Translates to: RPHQATQVSGWE*SYRALVKPSSL
Trigger: CAAAGAACTCGGTTTAACCAGGGCTCTGTAAGACCACTCCCACCCAGAGACTTGTGTGGCCTGGTGTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 72 bp GAACCTGGGGATCCTCAGGGGCTTCTTGGCAGGGCCTaGCACACTCCATTTGGAAAGAAGACCATGAGACAA +
Preference number: 3 (lower is better)
Translates to: EPGDPQGLLGRA*HTPFGKKTMRQ
Trigger: TTGTCTCATGGTCTTCTTTCCAAATGGAGTGTGCCAGGCCCTGCCAAGAAGCCCCTGAGGATCCCCAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR-3UTR CAA 90 bp CAGGGGCTTCTTGGCAGGGCCTGGCACACTCCATTTGGAAAGAAGACCATGAGAACCCACACCTCCAATTaGGTGCAGCCACTGTATATC +
Preference number: 3 (lower is better)
Translates to: QGLLGRAWHTPFGKKTMRTHTSN*VQPLYI
Trigger: GATATACAGTGGCTGCACCAAATTGGAGGTGTGGGT...TCTCATGGTCTTCTTTCCAAATGGAGTGTGCCAGGCCCTGCCAAGAAGCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR TCA 72 bp AGGGACATTGATCCAGAGAGAAAGGGACAGAGACCTTaGGAGAGGACAGAGACCCAGAGAGAGGGGAACAGA +
Preference number: 3 (lower is better)
Translates to: RDIDPERKGQRP*ERTETQREGNR
Trigger: TCTGTTCCCCTCTCTCTGGGTCTCTGTCCTCTCTCAAGGTCTCTGTCCCTTTCTCTCTGGATCAATGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR GCA 72 bp AGCAGGGCGGGAGGGAAAGGGATCCTCCACCTGACCTaGGAGAGCAGCTTAATGTTTCCATATAAAGGAGAT +
Preference number: 3 (lower is better)
Translates to: SRAGGKGILHLT*ESSLMFPYKGD
Trigger: ATCTCCTTTATATGGAAACATTAAGCTGCTCTCGCAGGTCAGGTGGAGGATCCCTTTCCCTCCCGCCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 72 bp CAGTCTTCTCAAGAGCACTCTGGTTTCAAACACACCTaGTATGTACGAGGCCTCGTGATGAGCTCCCGACAT +
Preference number: 3 (lower is better)
Translates to: QSSQEHSGFKHT*YVRGLVMSSRH
Trigger: ATGTCGGGAGCTCATCACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTCTTGAGAAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CCA 72 bp CCATTTGGAAAGAAGACCATGAGACAATGTCAAGTTTaGCACCAACTGGGTCTCCCAAAGCCCTGCACCTGC +
Preference number: 3 (lower is better)
Translates to: PFGKKTMRQCQV*HQLGLPKPCTC
Trigger: GCAGGTGCAGGGCTTTGGGAGACCCAGTTGGTGCCAAACTTGACATTGTCTCATGGTCTTCTTTCCAAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR TCA 72 bp CCACAGTGTACCCCAACCTTGACTCTATCTCACCCCTaGCAACCCTGCATGTTAGAGACTGTTCTCCCAAAA +
Preference number: 3 (lower is better)
Translates to: PQCTPTLTLSHP*QPCMLETVLPK
Trigger: TTTTGGGAGAACAGTCTCTAACATGCAGGGTTGTCAGGGGTGAGATAGAGTCAAGGTTGGGGTACACTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp GAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGGCGTCCCAGGGGCCGTGTaGCGGGCACCCGACCTCGGA +
Preference number: 4 (lower is better)
Translates to: EPSPGGHLRPTWPSSQAGVPGAV*RAPDLG
Trigger: TCCGAGGTCGGGTGCCCGTCACACGGCCCCTGGGAC...GCCAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp GGCGGAGGAGCGAGACAGCGACTAGGGGGCAGGGAGACTGGCAGTGGGGGACGGCACTGCGGGTGCCAGTaGAGCTCCTTCAGCTCGGTC +
Preference number: 4 (lower is better)
Translates to: GGGARQRLGGRETGSGGRHCGCQ*SSFSSV
Trigger: GACCGAGCTGAAGGAGCTGCACTGGCACCCGCAGTG...CCGTCCCCCACTGCCAGTCTCCCTGCCCCCTAGTCGCTGTCTCGCTCCTCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CAA 72 bp CAGAACGCGGCGGCACCCAGTGGGCGGAAGGTTGGGTaGCACTGGACTCCCAGTGGCCTCCCCCAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: QNAAAPSGRKVG*HWTPSGLPQPS
Trigger: GCTAGGCTGGGGGAGGCCACTGGGAGTCCAGTGCAACCCAACCTTCCGCCCACTGGGTGCCGCCGCGTTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp CACAGTTGGGGAACAGGCTCAGGGAACGCCATGAGCTGGCCAGGCCCCCGCAGTGGCCTTGCTGGGGGCTaGCCGGATGTCCCAGATGCG +
Preference number: 4 (lower is better)
Translates to: HSWGTGSGNAMSWPGPRSGLAGG*PDVPDA
Trigger: CGCATCTGGGACATCCGGGCAGCCCCCAGCAAGGCC...ACTGCGGGGGCCTGGCCAGCTCATGGCGTTCCCTGAGCCTGTTCCCCAACTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGGCAAGACCCCGCTGTCCTaGGGGTGCCACTCGACGGAG +
Preference number: 4 (lower is better)
Translates to: EPSPGGHLRPTWPSSQAGKTPLS*GCHSTE
Trigger: CTCCGTCGAGTGGCACCCCCAGGACAGCGGGGTCTT...GCCAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp TCCCCTGCTGGGAACCAGCAGCCAAAACTGGGTCCTGAGCCGGACGCGGTGGCTAGGGGGCAGGGAGACTaGCAGTGGGGGACGGGAGAC +
Preference number: 4 (lower is better)
Translates to: SPAGNQQPKLGPEPDAVARGQGD*QWGTGD
Trigger: GTCTCCCGTCCCCCACTGCCAGTCTCCCTGCCCCCT...AGCCACCGCGTCCGGCTCAGGACCCAGTTTTGGCTGCTGGTTCCCAGCAGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GGCGGAGGAGCGAGACAGCGACTAGGGGGCAGGGAGACTGGCAGTGGGGGACGGCAGCGGTGCCTTGCATaGAGGCACGTACCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: GGGARQRLGGRETGSGGRQRCLA*RHVPVG
Trigger: CCCAACAGGTACGTGCCTCCATGCAAGGCACCGCTG...CCGTCCCCCACTGCCAGTCTCCCTGCCCCCTAGTCGCTGTCTCGCTCCTCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CAA 72 bp ACGCAGCAGAGCAGGAGGGGATGGCTCAGCGGTGCCTaGCATGGAGGCACGTACCTGTTGGGGCGGCCCACC +
Preference number: 4 (lower is better)
Translates to: TQQSRRGWLSGA*HGGTYLLGRPT
Trigger: GGTGGGCCGCCCCAACAGGTACGTGCCTCCATGCAAGGCACCGCTGAGCCATCCCCTCCTGCTCTGCTGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp CACAGTTGGGGAACAGGCTCAGGGAACGCCATGAGCTGGCCAGGCCCCCGCAGTGAGGCAAGGCTGAGGTaGGGGGACCAGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: HSWGTGSGNAMSWPGPRSEARLR*GDQPGC
Trigger: ACAGCCAGGCTGGTCCCCTCACCTCAGCCTTGCCTC...ACTGCGGGGGCCTGGCCAGCTCATGGCGTTCCCTGAGCCTGTTCCCCAACTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GGCGGAGGAGCGAGACAGCGACTAGGGGGCAGGGAGACTGGCAGTGGGGGACGGCATAGTGGGGCACCATaGCCAGCTCCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: GGGARQRLGGRETGSGGRHSGAP*PAPAEV
Trigger: AACCTCAGCTGGAGCTGGCCATGGTGCCCCACTATG...CCGTCCCCCACTGCCAGTCTCCCTGCCCCCTAGTCGCTGTCTCGCTCCTCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp TCCCCTGCTGGGAACCAGCAGCCAAAACTGGGTCCTGAGCCGGACGCGGTGGCTCCACTCCCCACCTACTaGTGGGGGCTGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: SPAGNQQPKLGPEPDAVAPLPTY*WGLDSR
Trigger: CCTGCTGTCCAGCCCCCACCAGTAGGTGGGGAGTGG...AGCCACCGCGTCCGGCTCAGGACCCAGTTTTGGCTGCTGGTTCCCAGCAGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp TCCCCTGCTGGGAACCAGCAGCCAAAACTGGGTCCTGAGCCGGACGCGGTGGCTTCGGTCTCGCCCTGGTaGACGAACAGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SPAGNQQPKLGPEPDAVASVSPW*TNSSCC
Trigger: GCAGCAGCTGCTGTTCGTGCACCAGGGCGAGACCGA...AGCCACCGCGTCCGGCTCAGGACCCAGTTTTGGCTGCTGGTTCCCAGCAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp GGGAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGATCCCCCGAGTCCCCTaGTGGGAACCAGCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: GNLHQGAICGQHGPAPRLIPRVP*WEPAAK
Trigger: TTTGGCTGCTGGTTCCCAGCAGGGGACTCGGGGGAT...CAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp GAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGGCACTCTCAGACCCCACTaGTCACCTTGGCCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: EPSPGGHLRPTWPSSQAGTLRPH*SPWPLR
Trigger: CCTGAGCGGCCAAGGTGAGCAGTGGGGTCTGAGAGT...GCCAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGGCCGGACTCGGCTTCCATaGGTTCCCCGGTTTCACACG +
Preference number: 4 (lower is better)
Translates to: EPSPGGHLRPTWPSSQAGRTRLP*VPRFHT
Trigger: CGTGTGAAACCGGGGAACCCATGGAAGCCGAGTCCG...GCCAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp CACAGTTGGGGAACAGGCTCAGGGAACGCCATGAGCTGGCCAGGCCCCCGCAGTAGCTCGGTCTCGCCCTaGTGCACGAACAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HSWGTGSGNAMSWPGPRSSSVSP*CTNSSC
Trigger: GCAGCTGCTGTTCGTGCACCAGGGCGAGACCGAGCT...ACTGCGGGGGCCTGGCCAGCTCATGGCGTTCCCTGAGCCTGTTCCCCAACTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGGCCTGGCCAAACCCAGCTaGCAGGAAGACAACGGGCAG +
Preference number: 4 (lower is better)
Translates to: EPSPGGHLRPTWPSSQAGLAKPS*QEDNGQ
Trigger: CTGCCCGTTGTCTTCCTGCCAGCTGGGTTTGGCCAG...GCCAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGGCGCTGTAGTCTGTCCTTaGTCCCAGGGGCCGTGTGAC +
Preference number: 4 (lower is better)
Translates to: EPSPGGHLRPTWPSSQAGAVVCP*SQGPCD
Trigger: GTCACACGGCCCCTGGGACCAAGGACAGACTACAGC...GCCAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp CACAGTTGGGGAACAGGCTCAGGGAACGCCATGAGCTGGCCAGGCCCCCGCAGTGATGGAGGCGTCAGCTaGGCAGGAGGCAAACACCGT +
Preference number: 4 (lower is better)
Translates to: HSWGTGSGNAMSWPGPRSDGGVS*AGGKHR
Trigger: ACGGTGTTTGCCTCCTGCTCAGCTGACGCCTCCATC...ACTGCGGGGGCCTGGCCAGCTCATGGCGTTCCCTGAGCCTGTTCCCCAACTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp CCAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAACATCATCCCCGCCACTaGGCAGGAAGGGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: PVPPQPREADPLSTSQSQHHPRH*AGRAPG
Trigger: GCCGGGAGCCCTTCCTGCTCAGTGGCGGGGATGATG...TTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp TCCCCTGCTGGGAACCAGCAGCCAAAACTGGGTCCTGAGCCGGACGCGGTGGCTGTGAGGCCAGGGGTTTaGGAACCAGCCTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SPAGNQQPKLGPEPDAVAVRPGV*EPAWGR
Trigger: TCTTCCCCAGGCTGGTTCTCAAACCCCTGGCCTCAC...AGCCACCGCGTCCGGCTCAGGACCCAGTTTTGGCTGCTGGTTCCCAGCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp ACTGGGGCTGAGGTTAGTCCCTTGTCGCAGGTCTCTCAGCCAGTGGGGAGAGGATGCGCCGCCGACCCTTaGGCGCCGCCATCTTCGAAC +
Preference number: 4 (lower is better)
Translates to: TGAEVSPLSQVSQPVGRGCAADP*APPSSN
Trigger: GTTCGAAGATGGCGGCGCGCAAGGGTCGGCGGCGCA...TCCTCTCCCCACTGGCTGAGAGACCTGCGACAAGGGACTAACCTCAGCCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp CAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAACGGCTCCTCCACCACCTaGAGAAGCCGCCGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: QSHLSPVRQTRCLLPKANGSSTT*RSRRSA
Trigger: TGCGCTGCGGCGGCTTCTGCAGGTGGTGGAGGAGCC...GTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp GTATGTACGAGGCCTCGTGATGAGCTCCCGACATGCCCACAGCCCCCACTGGACCCTGGGCACTGCGGGTaGCAGTGCAGCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: VCTRPRDELPTCPQPPLDPGHCG*QCSSFS
Trigger: GCTGAAGGAGCTGCACTGGCACCCGCAGTGCCCAGG...GTCCAGTGGGGGCTGTGGGCATGTCGGGAGCTCATCACGAGGCCTCGTACATAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp CCAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAAAGGAGCCCTGGGCACTaGGGGTGCCAGTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PVPPQPREADPLSTSQSQRSPGH*GCQCSS
Trigger: GGAGCTGCACTGGCACCCGCAGTGCCCAGGGCTCCT...TTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp TCCCCTGCTGGGAACCAGCAGCCAAAACTGGGTCCTGAGCCGGACGCGGTGGCTGGGATGGCTCAGCGGTaGCTTGCATGGAGGCACGTA +
Preference number: 4 (lower is better)
Translates to: SPAGNQQPKLGPEPDAVAGMAQR*LAWRHV
Trigger: TACGTGCCTCCATGCAAGGCACCGCTGAGCCATCCC...AGCCACCGCGTCCGGCTCAGGACCCAGTTTTGGCTGCTGGTTCCCAGCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp TCCCCTGCTGGGAACCAGCAGCCAAAACTGGGTCCTGAGCCGGACGCGGTGGCTCCTGGCTGTGTCCAGTaGCCACAGTGTACCCCAACC +
Preference number: 4 (lower is better)
Translates to: SPAGNQQPKLGPEPDAVAPGCVQ*PQCTPT
Trigger: GGTTGGGGTACACTGTGGGCACTGGACACAGCCAGG...AGCCACCGCGTCCGGCTCAGGACCCAGTTTTGGCTGCTGGTTCCCAGCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp TCCCCTGCTGGGAACCAGCAGCCAAAACTGGGTCCTGAGCCGGACGCGGTGGCTCCAAAGCCCTGCACCTaGTTCCCACAACCACGCAGG +
Preference number: 4 (lower is better)
Translates to: SPAGNQQPKLGPEPDAVAPKPCT*FPQPRR
Trigger: CCTGCGTGGTTGTGGGAAGCAGGTGCAGGGCTTTGG...AGCCACCGCGTCCGGCTCAGGACCCAGTTTTGGCTGCTGGTTCCCAGCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp CCAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAAGCATGCAGGCCTTGCTaGGGGCTGCCCGGATGTCCC +
Preference number: 4 (lower is better)
Translates to: PVPPQPREADPLSTSQSQACRPC*GLPGCP
Trigger: GGGACATCCGGGCAGCCCCCAGCAAGGCCTGCATGC...TTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp CAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAACCGCGGCGGCACCCAGTaGGCGGAAGGTTGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: QSHLSPVRQTRCLLPKANRGGTQ*AEGWVA
Trigger: TGCAACCCAACCTTCCGCCCACTGGGTGCCGCCGCG...GTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp CAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAACGAGGCACGTACCTGTTaGGGCGGCCCACCCCCATGC +
Preference number: 4 (lower is better)
Translates to: QSHLSPVRQTRCLLPKANEARTC*GGPPPC
Trigger: GCATGGGGGTGGGCCGCCCCAACAGGTACGTGCCTC...GTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GGGAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGAGCAGCCTGTCAGGGTaGACCAAAGGAAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GNLHQGAICGQHGPAPRLSSLSG*TKGKGW
Trigger: CCAGCCCTTTCCTTTGGTCCACCCTGACAGGCTGCT...CAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp TCCCACAACCACGCAGGCAGCCTGGCCATTCGCGAGGGTTCATTAGGCCCACTTAGGCCTCCTCGTCCATaGCCAGCTCCTCCCCTTCGC +
Preference number: 4 (lower is better)
Translates to: SHNHAGSLAIREGSLGPLRPPRP*PAPPLR
Trigger: GCGAAGGGGAGGAGCTGGTCATGGACGAGGAGGCCT...AAGTGGGCCTAATGAACCCTCGCGAATGGCCAGGCTGCCTGCGTGGTTGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp GAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGGCCTCAGTCAACAGACCTaGATGAACCCCTTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: EPSPGGHLRPTWPSSQAGLSQQT*MNPFQG
Trigger: CCCCTGGAAGGGGTTCATTCAGGTCTGTTGACTGAG...GCCAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp GGGAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGCTTCTTCTTCATCACTaGCCTCTGAGGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GNLHQGAICGQHGPAPRLLLLHH*PLRVGA
Trigger: AGCCCCCACCCTCAGAGGGCAGTGATGAAGAAGAAG...CAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp TCCCCTGCTGGGAACCAGCAGCCAAAACTGGGTCCTGAGCCGGACGCGGTGGCTGGCTTCATTTGGGCCTaGTCATCCCGGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: SPAGNQQPKLGPEPDAVAGFIWA*SSRRKA
Trigger: AGCCTTCCTCCGGGATGAGCAGGCCCAAATGAAGCC...AGCCACCGCGTCCGGCTCAGGACCCAGTTTTGGCTGCTGGTTCCCAGCAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp CACAGTTGGGGAACAGGCTCAGGGAACGCCATGAGCTGGCCAGGCCCCCGCAGTCCAAGATCGTGCTACTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: HSWGTGSGNAMSWPGPRSPRSCY*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTAGCACGATCTTGG...ACTGCGGGGGCCTGGCCAGCTCATGGCGTTCCCTGAGCCTGTTCCCCAACTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GGGAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGCAAGATCAGAGCCAGTaGGACGCCTCAGACGCTGAT +
Preference number: 4 (lower is better)
Translates to: GNLHQGAICGQHGPAPRLQDQSQ*DASDAD
Trigger: ATCAGCGTCTGAGGCGTCCCACTGGCTCTGATCTTG...CAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GTATGTACGAGGCCTCGTGATGAGCTCCCGACATGCCCACAGCCCCCACTGGACACCAGCAGCCAAAACTaGGTCCTGAGCCGGACGCGG +
Preference number: 4 (lower is better)
Translates to: VCTRPRDELPTCPQPPLDTSSQN*VLSRTR
Trigger: CCGCGTCCGGCTCAGGACCCAGTTTTGGCTGCTGGT...GTCCAGTGGGGGCTGTGGGCATGTCGGGAGCTCATCACGAGGCCTCGTACATAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GGCGGAGGAGCGAGACAGCGACTAGGGGGCAGGGAGACTGGCAGTGGGGGACGGGGTTTCAAACACACCTaGTATGTACGAGGCCTCGTG +
Preference number: 4 (lower is better)
Translates to: GGGARQRLGGRETGSGGRGFKHT*YVRGLV
Trigger: CACGAGGCCTCGTACATACCAGGTGTGTTTGAAACC...CCGTCCCCCACTGCCAGTCTCCCTGCCCCCTAGTCGCTGTCTCGCTCCTCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp AGGTCAAATGGGTCACAGCTGACAGGAAGGAATCCGACACACAGGCCACACCAGCCCCGGTTTCACACGTaGGCCGCCGACCCTTGCGCG +
Preference number: 4 (lower is better)
Translates to: RSNGSQLTGRNPTHRPHQPRFHT*AADPCA
Trigger: CGCGCAAGGGTCGGCGGCGCACGTGTGAAACCGGGG...CTGGTGTGGCCTGTGTGTCGGATTCCTTCCTGTCAGCTGTGACCCATTTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp CACCCCCACTTGCCCATCTCTCACCAAAGCCCTTTGATGAAGGGACCTGGCTTTGGCCGCTGGTCCACGTaGCAGGAGCCGCCGTCCGTA +
Preference number: 4 (lower is better)
Translates to: HPHLPISHQSPLMKGPGFGRWST*QEPPSV
Trigger: TACGGACGGCGGCTCCTGGCACGTGGACCAGCGGCC...AAAGCCAGGTCCCTTCATCAAAGGGCTTTGGTGAGAGATGGGCAAGTGGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GGCGGAGGAGCGAGACAGCGACTAGGGGGCAGGGAGACTGGCAGTGGGGGACGGGGTCTTACAGAGCCCTaGTTAAACCGAGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GGGARQRLGGRETGSGGRGLTEP*LNRVLW
Trigger: CCAAAGAACTCGGTTTAACCAGGGCTCTGTAAGACC...CCGTCCCCCACTGCCAGTCTCCCTGCCCCCTAGTCGCTGTCTCGCTCCTCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGGCTTCCTCATAGGGCTGTaGCCAAAGGACCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: EPSPGGHLRPTWPSSQAGFLIGL*PKDQSL
Trigger: GAGACTCTGGTCCTTTGGCCACAGCCCTATGAGGAA...GCCAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GGCCCTGTGGTGGGGAACTTCCCAGGAACTGGCTGGATCAGGACAAACCATTCCCCCCACTGCTCACCTTaGCCGCTCAGGATGCCGGGA +
Preference number: 4 (lower is better)
Translates to: GPVVGNFPGTGWIRTNHSPHCSP*PLRMPG
Trigger: TCCCGGCATCCTGAGCGGCCAAGGTGAGCAGTGGGG...GGAATGGTTTGTCCTGATCCAGCCAGTTCCTGGGAAGTTCCCCACCACAGGGCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp CAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAACCCCAAGGGGGCGGCCTaGAGGTCAACATCAGGATGC +
Preference number: 4 (lower is better)
Translates to: QSHLSPVRQTRCLLPKANPKGAA*RSTSGC
Trigger: GCATCCTGATGTTGACCTCCAGGCCGCCCCCTTGGG...GTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GATGGAAGGACACTTAGAGAAGGCAGAACGCGGCGGCACCCAGTGGGCGGAAGGACCACGCAGGCAGCCTaGCCATTCGCGAGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: DGRTLREGRTRRHPVGGRTTQAA*PFARVH
Trigger: ATGAACCCTCGCGAATGGCCAGGCTGCCTGCGTGGT...CCTTCCGCCCACTGGGTGCCGCCGCGTTCTGCCTTCTCTAAGTGTCCTTCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp TCCCACAACCACGCAGGCAGCCTGGCCATTCGCGAGGGTTCATTAGGCCCACTTGGAAAGGGCTGGGCATaGACCCGCACCCCTCATTGC +
Preference number: 4 (lower is better)
Translates to: SHNHAGSLAIREGSLGPLGKGWA*TRTPHC
Trigger: GCAATGAGGGGTGCGGGTCCATGCCCAGCCCTTTCC...AAGTGGGCCTAATGAACCCTCGCGAATGGCCAGGCTGCCTGCGTGGTTGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp TCCCACAACCACGCAGGCAGCCTGGCCATTCGCGAGGGTTCATTAGGCCCACTTCGTGTTCTCAGTCGGTaGCCACTGCAGGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SHNHAGSLAIREGSLGPLRVLSR*PLQVLH
Trigger: GTGGAGGACCTGCAGTGGTCACCGACTGAGAACACG...AAGTGGGCCTAATGAACCCTCGCGAATGGCCAGGCTGCCTGCGTGGTTGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp CACCCCCACTTGCCCATCTCTCACCAAAGCCCTTTGATGAAGGGACCTGGCTTTGGGCGGTGGCTGTGGTaGGCATGCAGGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HPHLPISHQSPLMKGPGFGRWLW*ACRPCW
Trigger: CCAGCAAGGCCTGCATGCTCACCACAGCCACCGCCC...AAAGCCAGGTCCCTTCATCAAAGGGCTTTGGTGAGAGATGGGCAAGTGGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp CCAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAAGAAGATGGTGAAGCCTaGCAGCGCCGTGCTGACCAG +
Preference number: 4 (lower is better)
Translates to: PVPPQPREADPLSTSQSQEDGEA*QRRADQ
Trigger: CTGGTCAGCACGGCGCTGTCAGGCTTCACCATCTTC...TTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp CAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAACGGGGACGGGAGACTCTaGAAGAGGGGGACACAGAGA +
Preference number: 4 (lower is better)
Translates to: QSHLSPVRQTRCLLPKANGDGRL*KRGTQR
Trigger: TCTCTGTGTCCCCCTCTTTCAGAGTCTCCCGTCCCC...GTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp CCAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAAAGCCTCTGTGGGTGCTaGGGGGCTGTAGTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PVPPQPREADPLSTSQSQSLCGC*GAVVCP
Trigger: AGGACAGACTACAGCCCCTCAGCACCCACAGAGGCT...TTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp GAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGGCGGGGAGATGAAATTGTaGAGACAGAGAGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: EPSPGGHLRPTWPSSQAGGEMKL*RQREAE
Trigger: CTCTGCCTCTCTCTGTCTTCACAATTTCATCTCCCC...GCCAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp GTATGTACGAGGCCTCGTGATGAGCTCCCGACATGCCCACAGCCCCCACTGGACCAGGAGGAGGGGTGTTaGGAGGGTGCCCCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: VCTRPRDELPTCPQPPLDQEEGC*EGAPRK
Trigger: TTTTCTTGGGGCACCCTCTCAACACCCCTCCTCCTG...GTCCAGTGGGGGCTGTGGGCATGTCGGGAGCTCATCACGAGGCCTCGTACATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp GTATGTACGAGGCCTCGTGATGAGCTCCCGACATGCCCACAGCCCCCACTGGACAGTCACTGTCTAATCTaGGGCCAAGAAGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: VCTRPRDELPTCPQPPLDSHCLI*GQEAPP
Trigger: GGGCGGGGCTTCTTGGCCTCAGATTAGACAGTGACT...GTCCAGTGGGGGCTGTGGGCATGTCGGGAGCTCATCACGAGGCCTCGTACATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp GTATGTACGAGGCCTCGTGATGAGCTCCCGACATGCCCACAGCCCCCACTGGACTCAGTCGGTGACCACTaGAGGTCCTCCACAGAGCGT +
Preference number: 4 (lower is better)
Translates to: VCTRPRDELPTCPQPPLDSVGDH*RSSTER
Trigger: ACGCTCTGTGGAGGACCTGCAGTGGTCACCGACTGA...GTCCAGTGGGGGCTGTGGGCATGTCGGGAGCTCATCACGAGGCCTCGTACATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp GGCCCTGTGGTGGGGAACTTCCCAGGAACTGGCTGGATCAGGACAAACCATTCCGTCTGCACCCGAGGCTaGAAAGACCCCGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GPVVGNFPGTGWIRTNHSVCTRG*KDPAVL
Trigger: CAGGACAGCGGGGTCTTTGCAGCCTCGGGTGCAGAC...GGAATGGTTTGTCCTGATCCAGCCAGTTCCTGGGAAGTTCCCCACCACAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp TCCCACAACCACGCAGGCAGCCTGGCCATTCGCGAGGGTTCATTAGGCCCACTTGGCTCAGCGGTGCCTTaGATGGAGGCACGTACCTGT +
Preference number: 4 (lower is better)
Translates to: SHNHAGSLAIREGSLGPLGSAVP*MEARTC
Trigger: ACAGGTACGTGCCTCCATGCAAGGCACCGCTGAGCC...AAGTGGGCCTAATGAACCCTCGCGAATGGCCAGGCTGCCTGCGTGGTTGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp CAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAACAAGGTTGGGTTGCACTaGACTCCCAGTGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QSHLSPVRQTRCLLPKANKVGLH*TPSGLP
Trigger: GGGGAGGCCACTGGGAGTCCAGTGCAACCCAACCTT...GTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp TCCCACAACCACGCAGGCAGCCTGGCCATTCGCGAGGGTTCATTAGGCCCACTTCAGAGCAGGAGGGGATaGCTCAGCGGTGCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: SHNHAGSLAIREGSLGPLQSRRG*LSGALH
Trigger: ATGCAAGGCACCGCTGAGCCATCCCCTCCTGCTCTG...AAGTGGGCCTAATGAACCCTCGCGAATGGCCAGGCTGCCTGCGTGGTTGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CAA 72 bp CCTCCAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTaGTCTACTTCCCAAAGCCAACGGGAACCTTCACCA +
Preference number: 4 (lower is better)
Translates to: PPVPPQPREADP*STSQSQREPSP
Trigger: TGGTGAAGGTTCCCGTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CAA 72 bp CTGGCCAGGCCCCCGCAGTGCCAGGGGGAATGCTGGTaGGGTCCTAAGCCTTTCTTTCCTTCCCAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LARPPQCQGECW*GPKPFFPSQSS
Trigger: AGAACTCTGGGAAGGAAAGAAAGGCTTAGGACCCAACCAGCATTCCCCCTGGCACTGCGGGGGCCTGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp CAGGGGCTTCTTGGCAGGGCCTGGCACACTCCATTTGGAAAGAAGACCATGAGAGCCAAAACTGGGTCCTaGGCCGGACGCGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: QGLLGRAWHTPFGKKTMRAKTGS*AGRGGS
Trigger: TGAGCCACCGCGTCCGGCTCAGGACCCAGTTTTGGC...TCTCATGGTCTTCTTTCCAAATGGAGTGTGCCAGGCCCTGCCAAGAAGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp CCAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAAGAGAGTTGGAGGCACTaGACCTGGGGGTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: PVPPQPREADPLSTSQSQESWRH*TWGWIL
Trigger: GAGAATCCACCCCCAGGTTCAGTGCCTCCAACTCTC...TTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp ACTGGGGCTGAGGTTAGTCCCTTGTCGCAGGTCTCTCAGCCAGTGGGGAGAGGAGCAAACACCTCCACCTaGCCCTTCTCTGACCACACC +
Preference number: 4 (lower is better)
Translates to: TGAEVSPLSQVSQPVGRGANTST*PFSDHT
Trigger: GGTGTGGTCAGAGAAGGGCCAGGTGGAGGTGTTTGC...TCCTCTCCCCACTGGCTGAGAGACCTGCGACAAGGGACTAACCTCAGCCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GGCCCTGTGGTGGGGAACTTCCCAGGAACTGGCTGGATCAGGACAAACCATTCCTTGACGTCCCCATCATaGGCGGTGGCTGTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GPVVGNFPGTGWIRTNHSLTSPS*AVAVVS
Trigger: GCTCACCACAGCCACCGCCCATGATGGGGACGTCAA...GGAATGGTTTGTCCTGATCCAGCCAGTTCCTGGGAAGTTCCCCACCACAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GTATGTACGAGGCCTCGTGATGAGCTCCCGACATGCCCACAGCCCCCACTGGACGGCCACACAAGTCTCTaGGTGGGAGTGGTCTTACAG +
Preference number: 4 (lower is better)
Translates to: VCTRPRDELPTCPQPPLDGHTSL*VGVVLQ
Trigger: CTGTAAGACCACTCCCACCCAGAGACTTGTGTGGCC...GTCCAGTGGGGGCTGTGGGCATGTCGGGAGCTCATCACGAGGCCTCGTACATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp CACCCCCACTTGCCCATCTCTCACCAAAGCCCTTTGATGAAGGGACCTGGCTTTCCCAGCCTAGCGGCCTaGGGGCAGCTGGTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: HPHLPISHQSPLMKGPGFPSLAA*GQLVPN
Trigger: ATTTGGCACCAGCTGCCCCCAGGCCGCTAGGCTGGG...AAAGCCAGGTCCCTTCATCAAAGGGCTTTGGTGAGAGATGGGCAAGTGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GGAACCCACACCTCCAATTTGGTGCAGCCACTGTATATCCCCCGAGTCCCCTGCGCCTTCATAAGCTGGTaGGGGTCAGGGATGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GTHTSNLVQPLYIPRVPCAFISW*GSGMRP
Trigger: GGGCCTCATCCCTGACCCCCACCAGCTTATGAAGGC...GCAGGGGACTCGGGGGATATACAGTGGCTGCACCAAATTGGAGGTGTGGGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp GTATGTACGAGGCCTCGTGATGAGCTCCCGACATGCCCACAGCCCCCACTGGACGGGTCCAGAGTTCCCTaGGATGAAGCCTTCATAAGC +
Preference number: 4 (lower is better)
Translates to: VCTRPRDELPTCPQPPLDGSRVP*DEAFIS
Trigger: GCTTATGAAGGCTTCATCTCAGGGAACTCTGGACCC...GTCCAGTGGGGGCTGTGGGCATGTCGGGAGCTCATCACGAGGCCTCGTACATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp CACCCCCACTTGCCCATCTCTCACCAAAGCCCTTTGATGAAGGGACCTGGCTTTGATGAGCTCCCGACATaGCCACAGCCCCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: HPHLPISHQSPLMKGPGFDELPT*PQPPLD
Trigger: GTCCAGTGGGGGCTGTGGGCATGTCGGGAGCTCATC...AAAGCCAGGTCCCTTCATCAAAGGGCTTTGGTGAGAGATGGGCAAGTGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp CCAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAAAAGATGGGCTTCATTTaGGCCTGCTCATCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: PVPPQPREADPLSTSQSQKMGFI*ACSSRR
Trigger: CCTCCGGGATGAGCAGGCCCAAATGAAGCCCATCTT...TTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGATGAGCTCCCGGCCTGGGGGCAGCTaGTGCCAAATTCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: EHSGFKHTWYVRGLVMSSRPGGS*CQIPPH
Trigger: GTGGGGAGGAATTTGGCACCAGCTGCCCCCAGGCCG...GGAGCTCATCACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp GGCCCTGTGGTGGGGAACTTCCCAGGAACTGGCTGGATCAGGACAAACCATTCCCGGTTGTCTCCCAGGTaGTCCCGGACTATGTCAAAG +
Preference number: 4 (lower is better)
Translates to: GPVVGNFPGTGWIRTNHSRLSPR*SRTMSK
Trigger: CTTTGACATAGTCCGGGATCACCTGGGAGACAACCG...GGAATGGTTTGTCCTGATCCAGCCAGTTCCTGGGAAGTTCCCCACCACAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp CCAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAAAACCGAGTTCTTTGGTaGGAGGGGTCACTGGATCAG +
Preference number: 4 (lower is better)
Translates to: PVPPQPREADPLSTSQSQNRVLW*EGSLDQ
Trigger: CTGATCCAGTGACCCCTCTCACCAAAGAACTCGGTT...TTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp ACTGGGGCTGAGGTTAGTCCCTTGTCGCAGGTCTCTCAGCCAGTGGGGAGAGGAAGTGTACCCCAACCTTaGCTCTATCTCACCCCTGAC +
Preference number: 4 (lower is better)
Translates to: TGAEVSPLSQVSQPVGRGSVPQP*LYLTPD
Trigger: GTCAGGGGTGAGATAGAGTCAAGGTTGGGGTACACT...TCCTCTCCCCACTGGCTGAGAGACCTGCGACAAGGGACTAACCTCAGCCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp TCAACAGACCTGAATGAACCCCTTCCAGGGGAGCCCAATTCGACTTCAGTTTCCACGGGGGCCACGTGCTaGTTGAAGGTGGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: STDLNEPLPGEPNSTSVSTGATC*LKVATG
Trigger: CCCAGTGGCCACCTTCAAGCAGCACGTGGCCCCCGT...GGAAACTGAAGTCGAATTGGGCTCCCCTGGAAGGGGTTCATTCAGGTCTGTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp GAAAAGAAATGGAGGGAATCGCAGCAGCCTGTCAGGGTGGACCAAAGGAAAGGGGTCACGGGGGCCACGTaGTGCTTGAAGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: EKKWRESQQPVRVDQRKGVTGAT*CLKVAT
Trigger: AGTGGCCACCTTCAAGCAGCACGTGGCCCCCGTGAC...CCCTTTCCTTTGGTCCACCCTGACAGGCTGCTGCGATTCCCTCCATTTCTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp ACTGGGGCTGAGGTTAGTCCCTTGTCGCAGGTCTCTCAGCCAGTGGGGAGAGGAGGGGTGTTGAGAGGGTaGCCCAAGAAAAAGTACAGG +
Preference number: 4 (lower is better)
Translates to: TGAEVSPLSQVSQPVGRGGVLRG*PKKKYR
Trigger: CCTGTACTTTTTCTTGGGGCACCCTCTCAACACCCC...TCCTCTCCCCACTGGCTGAGAGACCTGCGACAAGGGACTAACCTCAGCCCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp GAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGATGAGCTCCACTGACACTGACCTGTaGTCCCCAGGCCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: EHSGFKHTWYVRGLVMSSTDTDL*SPGPSL
Trigger: CAGGCTGGGGCCTGGGGAGCACAGGTCAGTGTCAGT...GGAGCTCATCACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp GATGGAAGGACACTTAGAGAAGGCAGAACGCGGCGGCACCCAGTGGGCGGAAGGGCCTTCAGGGTTCACTaGAACGTTACCAAACGCTTG +
Preference number: 4 (lower is better)
Translates to: DGRTLREGRTRRHPVGGRAFRVH*NVTKRL
Trigger: CAAGCGTTTGGTAACGTTGCAGTGAACCCTGAAGGC...CCTTCCGCCCACTGGGTGCCGCCGCGTTCTGCCTTCTCTAAGTGTCCTTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGATGAGCTCCTCCACAGAGCGTGTGTaGCCCACGAATGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: EHSGFKHTWYVRGLVMSSSTERV*PTNGRW
Trigger: CCAGCGGCCATTCGTGGGCCACACACGCTCTGTGGA...GGAGCTCATCACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp CACCCCCACTTGCCCATCTCTCACCAAAGCCCTTTGATGAAGGGACCTGGCTTTTGTCCCAGATGCGGATaGAGGCGTCAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HPHLPISHQSPLMKGPGFCPRCG*RRQLSR
Trigger: CCTGCTCAGCTGACGCCTCCATCCGCATCTGGGACA...AAAGCCAGGTCCCTTCATCAAAGGGCTTTGGTGAGAGATGGGCAAGTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp ACTGGGGCTGAGGTTAGTCCCTTGTCGCAGGTCTCTCAGCCAGTGGGGAGAGGAACACAAGTCTCTGGGTaGGAGTGGTCTTACAGAGCC +
Preference number: 4 (lower is better)
Translates to: TGAEVSPLSQVSQPVGRGTQVSG*EWSYRA
Trigger: GGCTCTGTAAGACCACTCCCACCCAGAGACTTGTGT...TCCTCTCCCCACTGGCTGAGAGACCTGCGACAAGGGACTAACCTCAGCCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp AGGCCACACAAGTCTCTGGGTGGGAGTGGTCTTACAGAGCCCTGGTTAAACCGAACACCCGAACTCGGTTaGTGCCACCATAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RPHKSLGGSGLTEPWLNRTPELG*CHHSGA
Trigger: TGCCCCACTATGGTGGCATCAACCGAGTTCGGGTGT...TCGGTTTAACCAGGGCTCTGTAAGACCACTCCCACCCAGAGACTTGTGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp TTGGTGAGAGGGGTCACTGGATCAGAGCCAGGCCTTCTAGAGAACAATACGTCACCCGGATGTCCCAGATaGGGATGGAGGCGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LVRGVTGSEPGLLENNTSPGCPR*GWRRQL
Trigger: CAGCTGACGCCTCCATCCGCATCTGGGACATCCGGG...TGACGTATTGTTCTCTAGAAGGCCTGGCTCTGATCCAGTGACCCCTCTCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp CAGGGCTTAAGGTGCTTCAACTTCGTGTCAAAGTCACTGTCTAATCTGAGGCCACCGCTGTCCTGGGGGTaGCACTCGACGGAGGTCACG +
Preference number: 4 (lower is better)
Translates to: QGLRCFNFVSKSLSNLRPPLSWG*HSTEVT
Trigger: CGTGACCTCCGTCGAGTGGCACCCCCAGGACAGCGG...TGGCCTCAGATTAGACAGTGACTTTGACACGAAGTTGAAGCACCTTAAGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp GAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGATGAGCTCCAGGGTCCCGCTCCACTaGCAGGTCCCACTGTGTGAT +
Preference number: 4 (lower is better)
Translates to: EHSGFKHTWYVRGLVMSSRVPLH*QVPLCD
Trigger: ATCACACAGTGGGACCTGGCAGTGGAGCGGGACCCT...GGAGCTCATCACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp GGCCCTGTGGTGGGGAACTTCCCAGGAACTGGCTGGATCAGGACAAACCATTCCCTGGTCCTTTATTGCTaGTCAGGAGCCCTGACCTTC +
Preference number: 4 (lower is better)
Translates to: GPVVGNFPGTGWIRTNHSLVLYC*SGALTF
Trigger: GAAGGTCAGGGCTCCTGAGCAGCAATAAAGGACCAG...GGAATGGTTTGTCCTGATCCAGCCAGTTCCTGGGAAGTTCCCCACCACAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp GGCCCTGTGGTGGGGAACTTCCCAGGAACTGGCTGGATCAGGACAAACCATTCCTTCCTGGTCCTTTATTaGTGCTCAGGAGCCCTGACC +
Preference number: 4 (lower is better)
Translates to: GPVVGNFPGTGWIRTNHSFLVLY*CSGALT
Trigger: GGTCAGGGCTCCTGAGCAGCAATAAAGGACCAGGAA...GGAATGGTTTGTCCTGATCCAGCCAGTTCCTGGGAAGTTCCCCACCACAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp ATGAACCCCTTCCAGGGGAGCCCAATTCGACTTCAGTTTCCAAGCAGGAAGCAAGGCGGAAGGTTGGGTTaGACTGGACTCCCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: MNPFQGSPIRLQFPSRKQGGRLG*TGLPVA
Trigger: GGCCACTGGGAGTCCAGTGCAACCCAACCTTCCGCC...TTGCTTCCTGCTTGGAAACTGAAGTCGAATTGGGCTCCCCTGGAAGGGGTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp CACCCCCACTTGCCCATCTCTCACCAAAGCCCTTTGATGAAGGGACCTGGCTTTATCAGTCTGTTGCTCTaGGCGCTCTCAGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: HPHLPISHQSPLMKGPGFISLLL*ALSAWV
Trigger: GACCCAGGCTGAGAGCGCCCAGAGCAACAGACTGAT...AAAGCCAGGTCCCTTCATCAAAGGGCTTTGGTGAGAGATGGGCAAGTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp CAGGGCTTAAGGTGCTTCAACTTCGTGTCAAAGTCACTGTCTAATCTGAGGCCACCCACGAATGGCCGCTaGTCCACGTGCCAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: QGLRCFNFVSKSLSNLRPPTNGR*STCQEP
Trigger: CGGCTCCTGGCACGTGGACCAGCGGCCATTCGTGGG...TGGCCTCAGATTAGACAGTGACTTTGACACGAAGTTGAAGCACCTTAAGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp TTGGTGAGAGGGGTCACTGGATCAGAGCCAGGCCTTCTAGAGAACAATACGTCATGTGTGGCCCACGAATaGCCGCTGGTCCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: LVRGVTGSEPGLLENNTSCVAHE*PLVHVP
Trigger: TGGCACGTGGACCAGCGGCCATTCGTGGGCCACACA...TGACGTATTGTTCTCTAGAAGGCCTGGCTCTGATCCAGTGACCCCTCTCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp AGGCCACACAAGTCTCTGGGTGGGAGTGGTCTTACAGAGCCCTGGTTAAACCGAGGTGAGAGGGGTCACTaGATCAGAGCCAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RPHKSLGGSGLTEPWLNRGERGH*IRARPS
Trigger: AGAAGGCCTGGCTCTGATCCAGTGACCCCTCTCACC...TCGGTTTAACCAGGGCTCTGTAAGACCACTCCCACCCAGAGACTTGTGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGATGAGCTCCGGACGGAGGGAGAAATaGGGGGTCCAGAGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: EHSGFKHTWYVRGLVMSSGRREK*GVQSSL
Trigger: CAGGGAACTCTGGACCCCCCATTTCTCCCTCCGTCC...GGAGCTCATCACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp AGGTCAAATGGGTCACAGCTGACAGGAAGGAATCCGACACACAGGCCACACCAGCCTACTGGTGGGGGCTaGACAGCAGGTTGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: RSNGSQLTGRNPTHRPHQPTGGG*TAGWKA
Trigger: TGCTTTCCAACCTGCTGTCCAGCCCCCACCAGTAGG...CTGGTGTGGCCTGTGTGTCGGATTCCTTCCTGTCAGCTGTGACCCATTTGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp ATGAACCCCTTCCAGGGGAGCCCAATTCGACTTCAGTTTCCAAGCAGGAAGCAACTCCCCACCTACTGGTaGGGGCTGGACAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: MNPFQGSPIRLQFPSRKQLPTYW*GLDSRL
Trigger: CAACCTGCTGTCCAGCCCCCACCAGTAGGTGGGGAG...TTGCTTCCTGCTTGGAAACTGAAGTCGAATTGGGCTCCCCTGGAAGGGGTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp TCTTCTCAAGAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGCAGCCCTCCCCAGCCTaGGGATCCCCACTCAGCACT +
Preference number: 4 (lower is better)
Translates to: SSQEHSGFKHTWYVRGLVQPSPA*GSPLST
Trigger: AGTGCTGAGTGGGGATCCCCAGGCTGGGGAGGGCTG...CACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTCTTGAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp CAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAACGAACTTCCCAGGAACTaGCTGGATCAGGACAAACCA +
Preference number: 4 (lower is better)
Translates to: QSHLSPVRQTRCLLPKANELPRN*LDQDKP
Trigger: TGGTTTGTCCTGATCCAGCCAGTTCCTGGGAAGTTC...GTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CAA 72 bp CAAAGGAAAGGGCTGGGCATGGACCCGCACCCCTCATaGCCTTCAGGGTTCACTGCAACGTTACCAAACGCT +
Preference number: 4 (lower is better)
Translates to: QRKGLGMDPHPS*PSGFTATLPNA
Trigger: AGCGTTTGGTAACGTTGCAGTGAACCCTGAAGGCAATGAGGGGTGCGGGTCCATGCCCAGCCCTTTCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp TCCCACAACCACGCAGGCAGCCTGGCCATTCGCGAGGGTTCATTAGGCCCACTTAGCTACCTGGGAGACTaGGCTGAGAGAATCACTTTA +
Preference number: 4 (lower is better)
Translates to: SHNHAGSLAIREGSLGPLSYLGD*AERITL
Trigger: TAAAGTGATTCTCTCAGCTCAGTCTCCCAGGTAGCT...AAGTGGGCCTAATGAACCCTCGCGAATGGCCAGGCTGCCTGCGTGGTTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp GATGGAAGGACACTTAGAGAAGGCAGAACGCGGCGGCACCCAGTGGGCGGAAGGTTGAGATCAAGAATTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: DGRTLREGRTRRHPVGGRLRSRI*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAATTCTTGATCTCAA...CCTTCCGCCCACTGGGTGCCGCCGCGTTCTGCCTTCTCTAAGTGTCCTTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp CAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAACGGCGGACAGATCACTTaGGATCAAGAATTTGAGACC +
Preference number: 4 (lower is better)
Translates to: QSHLSPVRQTRCLLPKANGGQIT*DQEFET
Trigger: GGTCTCAAATTCTTGATCTCAAGTGATCTGTCCGCC...GTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp CAGGGCTTAAGGTGCTTCAACTTCGTGTCAAAGTCACTGTCTAATCTGAGGCCAGCTGCTCAGGAGCCCTaGCCTTCCTCCCGACACAGC +
Preference number: 4 (lower is better)
Translates to: QGLRCFNFVSKSLSNLRPAAQEP*PSSRHS
Trigger: GCTGTGTCGGGAGGAAGGTCAGGGCTCCTGAGCAGC...TGGCCTCAGATTAGACAGTGACTTTGACACGAAGTTGAAGCACCTTAAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp CACCCCCACTTGCCCATCTCTCACCAAAGCCCTTTGATGAAGGGACCTGGCTTTGCATCATCAGTCTGTTaGTCTGGGCGCTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: HPHLPISHQSPLMKGPGFASSVC*SGRSQP
Trigger: AGGCTGAGAGCGCCCAGAGCAACAGACTGATGATGC...AAAGCCAGGTCCCTTCATCAAAGGGCTTTGGTGAGAGATGGGCAAGTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp TCCCACAACCACGCAGGCAGCCTGGCCATTCGCGAGGGTTCATTAGGCCCACTTGTCCCATGCAGATTGTaGATCCGAAGCATCATCAGT +
Preference number: 4 (lower is better)
Translates to: SHNHAGSLAIREGSLGPLVPCRL*IRSIIS
Trigger: ACTGATGATGCTTCGGATGCACAATCTGCATGGGAC...AAGTGGGCCTAATGAACCCTCGCGAATGGCCAGGCTGCCTGCGTGGTTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp CACCCCCACTTGCCCATCTCTCACCAAAGCCCTTTGATGAAGGGACCTGGCTTTGGGGGCTTTGTCCCATaGAGATTGTGCATCCGAAGC +
Preference number: 4 (lower is better)
Translates to: HPHLPISHQSPLMKGPGFGGFVP*RLCIRS
Trigger: GCTTCGGATGCACAATCTGCATGGGACAAAGCCCCC...AAAGCCAGGTCCCTTCATCAAAGGGCTTTGGTGAGAGATGGGCAAGTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp GGAACCCACACCTCCAATTTGGTGCAGCCACTGTATATCCCCCGAGTCCCCTGCACACCTCCAATTTGGTaGAGCCACTGTATATCCCCC +
Preference number: 4 (lower is better)
Translates to: GTHTSNLVQPLYIPRVPCTPPIW*SHCISP
Trigger: GGGGGATATACAGTGGCTGCACCAAATTGGAGGTGT...GCAGGGGACTCGGGGGATATACAGTGGCTGCACCAAATTGGAGGTGTGGGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp GGAACCCACACCTCCAATTTGGTGCAGCCACTGTATATCCCCCGAGTCCCCTGCAGGTCAACATCAGGATaGAGCATCTACACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GTHTSNLVQPLYIPRVPCRSTSG*SIYTCS
Trigger: GCTGCAGGTGTAGATGCTGCATCCTGATGTTGACCT...GCAGGGGACTCGGGGGATATACAGTGGCTGCACCAAATTGGAGGTGTGGGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp AGGCCACACAAGTCTCTGGGTGGGAGTGGTCTTACAGAGCCCTGGTTAAACCGAACCCGCACCCCTCATTaGCTTCAGGGTTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: RPHKSLGGSGLTEPWLNRTRTPH*LQGSLQ
Trigger: TTGCAGTGAACCCTGAAGGCAATGAGGGGTGCGGGT...TCGGTTTAACCAGGGCTCTGTAAGACCACTCCCACCCAGAGACTTGTGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GGAACCCACACCTCCAATTTGGTGCAGCCACTGTATATCCCCCGAGTCCCCTGCTGCATAAAATGGGGATaGGGTGAGAGTTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: GTHTSNLVQPLYIPRVPCCIKWG*GESWRH
Trigger: GTGCCTCCAACTCTCACCCCATCCCCATTTTATGCA...GCAGGGGACTCGGGGGATATACAGTGGCTGCACCAAATTGGAGGTGTGGGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp CAGGGCTTAAGGTGCTTCAACTTCGTGTCAAAGTCACTGTCTAATCTGAGGCCACATCTGCGGCCAACATaGCCCAGCTCCCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: QGLRCFNFVSKSLSNLRPHLRPT*PSSQAG
Trigger: GCCAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATG...TGGCCTCAGATTAGACAGTGACTTTGACACGAAGTTGAAGCACCTTAAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CAA 72 bp ATTGCCTTCAGGGTTCACTGCAACGTTACCAAACGCTaGGCCCTGTGGTGGGGAACTTCCCAGGAACTGGCT +
Preference number: 4 (lower is better)
Translates to: IAFRVHCNVTKR*ALWWGTSQELA
Trigger: AGCCAGTTCCTGGGAAGTTCCCCACCACAGGGCCAAGCGTTTGGTAACGTTGCAGTGAACCCTGAAGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp TCTTCTCAAGAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGTTCATCACTGCCCTCTaGGGGTGGGGGCTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: SSQEHSGFKHTWYVRGLVFITAL*GWGLCP
Trigger: GGGACAAAGCCCCCACCCTCAGAGGGCAGTGATGAA...CACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTCTTGAGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp GAAAAGAAATGGAGGGAATCGCAGCAGCCTGTCAGGGTGGACCAAAGGAAAGGGATGGCCAGCTCCAGCTaGGGTTTCCGCTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: EKKWRESQQPVRVDQRKGMASSS*GFRSSS
Trigger: TGAAGAAGAGCGGAAACCTCAGCTGGAGCTGGCCAT...CCCTTTCCTTTGGTCCACCCTGACAGGCTGCTGCGATTCCCTCCATTTCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp CAGGGGCTTCTTGGCAGGGCCTGGCACACTCCATTTGGAAAGAAGACCATGAGAAGGTGGATGTTCTTTTaGCAGTCACCGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QGLLGRAWHTPFGKKTMRRWMFF*QSPVSR
Trigger: CCTGCTGACCGGTGACTGTCAAAAGAACATCCACCT...TCTCATGGTCTTCTTTCCAAATGGAGTGTGCCAGGCCCTGCCAAGAAGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp CAGGGCTTAAGGTGCTTCAACTTCGTGTCAAAGTCACTGTCTAATCTGAGGCCATGGTGCGGAAGATGGTaGAGCCTGACAGCGCCGTGC +
Preference number: 4 (lower is better)
Translates to: QGLRCFNFVSKSLSNLRPWCGRW*SLTAPC
Trigger: GCACGGCGCTGTCAGGCTTCACCATCTTCCGCACCA...TGGCCTCAGATTAGACAGTGACTTTGACACGAAGTTGAAGCACCTTAAGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp TCAACAGACCTGAATGAACCCCTTCCAGGGGAGCCCAATTCGACTTCAGTTTCCAGGCGGAGGTTGCAGTaGGCCAAGATCGTGCTACTG +
Preference number: 4 (lower is better)
Translates to: STDLNEPLPGEPNSTSVSRRRLQ*AKIVLL
Trigger: CAGTAGCACGATCTTGGCTCACTGCAACCTCCGCCT...GGAAACTGAAGTCGAATTGGGCTCCCCTGGAAGGGGTTCATTCAGGTCTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp CAGGGGCTTCTTGGCAGGGCCTGGCACACTCCATTTGGAAAGAAGACCATGAGAGGGGAACAGAGACCTTaGGAGGATAGAGACTCAGAG +
Preference number: 4 (lower is better)
Translates to: QGLLGRAWHTPFGKKTMRGEQRP*EDRDSE
Trigger: CTCTGAGTCTCTATCCTCTCAAGGTCTCTGTTCCCC...TCTCATGGTCTTCTTTCCAAATGGAGTGTGCCAGGCCCTGCCAAGAAGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp TTGGTGAGAGGGGTCACTGGATCAGAGCCAGGCCTTCTAGAGAACAATACGTCACCTCTCACCCCCACTTaGCCATCTCTCACCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LVRGVTGSEPGLLENNTSPLTPT*PSLTKA
Trigger: GGCTTTGGTGAGAGATGGGCAAGTGGGGGTGAGAGG...TGACGTATTGTTCTCTAGAAGGCCTGGCTCTGATCCAGTGACCCCTCTCACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp ACTGGGGCTGAGGTTAGTCCCTTGTCGCAGGTCTCTCAGCCAGTGGGGAGAGGAGGGTTAAATAATTTGTaGTGGAACCTGGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: TGAEVSPLSQVSQPVGRGGLNNL*WNLGIL
Trigger: GAGGATCCCCAGGTTCCAGCACAAATTATTTAACCC...TCCTCTCCCCACTGGCTGAGAGACCTGCGACAAGGGACTAACCTCAGCCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp AGGCCACACAAGTCTCTGGGTGGGAGTGGTCTTACAGAGCCCTGGTTAAACCGACAGCGAAGGAGAAGATaGGCTTCATTTGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RPHKSLGGSGLTEPWLNRQRRRR*ASFGPA
Trigger: AGCAGGCCCAAATGAAGCCCATCTTCTCCTTCGCTG...TCGGTTTAACCAGGGCTCTGTAAGACCACTCCCACCCAGAGACTTGTGTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp TTGGTGAGAGGGGTCACTGGATCAGAGCCAGGCCTTCTAGAGAACAATACGTCACACTGTGTGATCTGGTaGTCTGCACCCGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LVRGVTGSEPGLLENNTSHCVIW*SAPEAA
Trigger: TGCAGCCTCGGGTGCAGACCACCAGATCACACAGTG...TGACGTATTGTTCTCTAGAAGGCCTGGCTCTGATCCAGTGACCCCTCTCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp TTGGTGAGAGGGGTCACTGGATCAGAGCCAGGCCTTCTAGAGAACAATACGTCATCCCACTGTGTGATCTaGTGGTCTGCACCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LVRGVTGSEPGLLENNTSSHCVI*WSAPEA
Trigger: AGCCTCGGGTGCAGACCACCAGATCACACAGTGGGA...TGACGTATTGTTCTCTAGAAGGCCTGGCTCTGATCCAGTGACCCCTCTCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGATGAGCTCCCTCGGAGTCCACAGATaGATCAGAGGCTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: EHSGFKHTWYVRGLVMSSLGVHR*IRGWME
Trigger: CTCCATCCAGCCTCTGATCCATCTGTGGACTCCGAG...GGAGCTCATCACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp ATCCTGGCCAAACCCAGCTGGCAGGAAGACAACGGGCAGAAGCAAATTGTGTTGAGGTCTCTCAGCCAGTaGGGAGAGGAGTGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: ILAKPSWQEDNGQKQIVLRSLSQ*GEEWQK
Trigger: CTTTTGCCACTCCTCTCCCCACTGGCTGAGAGACCT...CAACACAATTTGCTTCTGCCCGTTGTCTTCCTGCCAGCTGGGTTTGGCCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp CAGGGGCTTCTTGGCAGGGCCTGGCACACTCCATTTGGAAAGAAGACCATGAGACTTCTTGGCAGGGCCTaGCACACTCCATTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: QGLLGRAWHTPFGKKTMRLLGRA*HTPFGK
Trigger: CTTTCCAAATGGAGTGTGCCAGGCCCTGCCAAGAAG...TCTCATGGTCTTCTTTCCAAATGGAGTGTGCCAGGCCCTGCCAAGAAGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp CACCCCCACTTGCCCATCTCTCACCAAAGCCCTTTGATGAAGGGACCTGGCTTTATTTGTGCTGGAACCTaGGGATCCTCAGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: HPHLPISHQSPLMKGPGFICAGT*GSSGAS
Trigger: AGAAGCCCCTGAGGATCCCCAGGTTCCAGCACAAAT...AAAGCCAGGTCCCTTCATCAAAGGGCTTTGGTGAGAGATGGGCAAGTGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CAA 72 bp GAGTGGTCTTACAGAGCCCTGGTTAAACCGAGTTCTTaGGTGAGAGGGGTCACTGGATCAGAGCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: EWSYRALVKPSS*VRGVTGSEPGL
Trigger: AAGGCCTGGCTCTGATCCAGTGACCCCTCTCACCAAAGAACTCGGTTTAACCAGGGCTCTGTAAGACCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
3UTR CAA 72 bp AGCTGGCAGGAAGACAACGGGCAGAAGCAAATTGTGTaGGAGGAACCCACACCTCCAATTTGGTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SWQEDNGQKQIV*EEPTPPIWCSH
Trigger: GTGGCTGCACCAAATTGGAGGTGTGGGTTCCTCCAACACAATTTGCTTCTGCCCGTTGTCTTCCTGCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp AGGTCAAATGGGTCACAGCTGACAGGAAGGAATCCGACACACAGGCCACACCAGCAGAGTTCCCTGAGATaGAGCCTTCATAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RSNGSQLTGRNPTHRPHQQSSLR*SLHKLV
Trigger: CACCAGCTTATGAAGGCTTCATCTCAGGGAACTCTG...CTGGTGTGGCCTGTGTGTCGGATTCCTTCCTGTCAGCTGTGACCCATTTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp TCCCACAACCACGCAGGCAGCCTGGCCATTCGCGAGGGTTCATTAGGCCCACTTTTGGAAAGAAGACCATaGGACAATGTCAAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: SHNHAGSLAIREGSLGPLLERRP*DNVKFG
Trigger: GCCAAACTTGACATTGTCTCATGGTCTTCTTTCCAA...AAGTGGGCCTAATGAACCCTCGCGAATGGCCAGGCTGCCTGCGTGGTTGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp CACCCCCACTTGCCCATCTCTCACCAAAGCCCTTTGATGAAGGGACCTGGCTTTGAACCAGACTTGAACTaGCGAAGGTCCCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: HPHLPISHQSPLMKGPGFEPDLN*RRSQIL
Trigger: CAAGATCTGGGACCTTCGGCAGTTCAAGTCTGGTTC...AAAGCCAGGTCCCTTCATCAAAGGGCTTTGGTGAGAGATGGGCAAGTGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp TTGGTGAGAGGGGTCACTGGATCAGAGCCAGGCCTTCTAGAGAACAATACGTCATGTGATCTGGTGGTCTaGACCCGAGGCTGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LVRGVTGSEPGLLENNTSCDLVV*TRGCKD
Trigger: GTCTTTGCAGCCTCGGGTGCAGACCACCAGATCACA...TGACGTATTGTTCTCTAGAAGGCCTGGCTCTGATCCAGTGACCCCTCTCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp TCAACAGACCTGAATGAACCCCTTCCAGGGGAGCCCAATTCGACTTCAGTTTCCGTCTCTGGGTGGGAGTaGTCTTACAGAGCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: STDLNEPLPGEPNSTSVSVSGWE*SYRALV
Trigger: AACCAGGGCTCTGTAAGACCACTCCCACCCAGAGAC...GGAAACTGAAGTCGAATTGGGCTCCCCTGGAAGGGGTTCATTCAGGTCTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp ATCCTGGCCAAACCCAGCTGGCAGGAAGACAACGGGCAGAAGCAAATTGTGTTGGGGACACAGGTCAAATaGGTCACAGCTGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: ILAKPSWQEDNGQKQIVLGTQVK*VTADRK
Trigger: CTTCCTGTCAGCTGTGACCCATTTGACCTGTGTCCC...CAACACAATTTGCTTCTGCCCGTTGTCTTCCTGCCAGCTGGGTTTGGCCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp AGGCCACACAAGTCTCTGGGTGGGAGTGGTCTTACAGAGCCCTGGTTAAACCGAGTAATCCCAGCTACCTaGGAGACTGAGCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: RPHKSLGGSGLTEPWLNRVIPAT*ETELRE
Trigger: TTCTCTCAGCTCAGTCTCCCAGGTAGCTGGGATTAC...TCGGTTTAACCAGGGCTCTGTAAGACCACTCCCACCCAGAGACTTGTGTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp ATCCTGGCCAAACCCAGCTGGCAGGAAGACAACGGGCAGAAGCAAATTGTGTTGCCTCAGGCCTCTTCCTaGTCCTTTATTGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: ILAKPSWQEDNGQKQIVLPQASS*SFIAAQ
Trigger: CTGAGCAGCAATAAAGGACCAGGAAGAGGCCTGAGG...CAACACAATTTGCTTCTGCCCGTTGTCTTCCTGCCAGCTGGGTTTGGCCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp TCCCACAACCACGCAGGCAGCCTGGCCATTCGCGAGGGTTCATTAGGCCCACTTTTAAATAATTTGTGCTaGAACCTGGGGATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SHNHAGSLAIREGSLGPLLNNLC*NLGILR
Trigger: CCTGAGGATCCCCAGGTTCCAGCACAAATTATTTAA...AAGTGGGCCTAATGAACCCTCGCGAATGGCCAGGCTGCCTGCGTGGTTGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp AGGCCACACAAGTCTCTGGGTGGGAGTGGTCTTACAGAGCCCTGGTTAAACCGATTCCCAGGAACTGGCTaGATCAGGACAAACCATTCC +
Preference number: 4 (lower is better)
Translates to: RPHKSLGGSGLTEPWLNRFPGTG*IRTNHS
Trigger: GGAATGGTTTGTCCTGATCCAGCCAGTTCCTGGGAA...TCGGTTTAACCAGGGCTCTGTAAGACCACTCCCACCCAGAGACTTGTGTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp CAGGGCTTAAGGTGCTTCAACTTCGTGTCAAAGTCACTGTCTAATCTGAGGCCAGGACTATGTCAAAGCTaGGACAGGGGGCGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: QGLRCFNFVSKSLSNLRPGLCQS*DRGRQS
Trigger: AGACTGGCGCCCCCTGTCTCAGCTTTGACATAGTCC...TGGCCTCAGATTAGACAGTGACTTTGACACGAAGTTGAAGCACCTTAAGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp CAGGGCTTAAGGTGCTTCAACTTCGTGTCAAAGTCACTGTCTAATCTGAGGCCAGTCAACAGACCTGAATaGACCCCTTCCAGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: QGLRCFNFVSKSLSNLRPVNRPE*TPSRGA
Trigger: GGCTCCCCTGGAAGGGGTTCATTCAGGTCTGTTGAC...TGGCCTCAGATTAGACAGTGACTTTGACACGAAGTTGAAGCACCTTAAGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp TCAACAGACCTGAATGAACCCCTTCCAGGGGAGCCCAATTCGACTTCAGTTTCCCAAATGGGTCACAGCTaGCAGGAAGGAATCCGACAC +
Preference number: 4 (lower is better)
Translates to: STDLNEPLPGEPNSTSVSQMGHS*QEGIRH
Trigger: GTGTCGGATTCCTTCCTGTCAGCTGTGACCCATTTG...GGAAACTGAAGTCGAATTGGGCTCCCCTGGAAGGGGTTCATTCAGGTCTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp ATCCTGGCCAAACCCAGCTGGCAGGAAGACAACGGGCAGAAGCAAATTGTGTTGACTCTATCTCACCCCTaGCAACCCTGCATGTTAGAG +
Preference number: 4 (lower is better)
Translates to: ILAKPSWQEDNGQKQIVLTLSHP*QPCMLE
Trigger: CTCTAACATGCAGGGTTGTCAGGGGTGAGATAGAGT...CAACACAATTTGCTTCTGCCCGTTGTCTTCCTGCCAGCTGGGTTTGGCCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp CAGGGCTTAAGGTGCTTCAACTTCGTGTCAAAGTCACTGTCTAATCTGAGGCCACAGTGGGGAGAGGAGTaGCAAAAGCTAGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QGLRCFNFVSKSLSNLRPQWGEE*QKLASH
Trigger: GTGGGAGGCTAGCTTTTGCCACTCCTCTCCCCACTG...TGGCCTCAGATTAGACAGTGACTTTGACACGAAGTTGAAGCACCTTAAGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp TCAACAGACCTGAATGAACCCCTTCCAGGGGAGCCCAATTCGACTTCAGTTTCCAAGTTTGGCACCAACTaGGTCTCCCAAAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: STDLNEPLPGEPNSTSVSKFGTN*VSQSPA
Trigger: TGCAGGGCTTTGGGAGACCCAGTTGGTGCCAAACTT...GGAAACTGAAGTCGAATTGGGCTCCCCTGGAAGGGGTTCATTCAGGTCTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp AGGTCAAATGGGTCACAGCTGACAGGAAGGAATCCGACACACAGGCCACACCAGGTAATCCTAGCACTTTaGGAGTCCAACTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RSNGSQLTGRNPTHRPHQVILAL*ESNSGG
Trigger: TCCTCCTGAGTTGGACTCCCAAAGTGCTAGGATTAC...CTGGTGTGGCCTGTGTGTCGGATTCCTTCCTGTCAGCTGTGACCCATTTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp TCTTCTCAAGAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGACGTTACCAAACGCTTaGCCCTGTGGTGGGGAACTT +
Preference number: 4 (lower is better)
Translates to: SSQEHSGFKHTWYVRGLVTLPNA*PCGGEL
Trigger: AAGTTCCCCACCACAGGGCCAAGCGTTTGGTAACGT...CACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTCTTGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR GCA 90 bp TCAACAGACCTGAATGAACCCCTTCCAGGGGAGCCCAATTCGACTTCAGTTTCCATCCTCCACCTGACCTaGGAGAGCAGCTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: STDLNEPLPGEPNSTSVSILHLT*ESSLMF
Trigger: AAACATTAAGCTGCTCTCGCAGGTCAGGTGGAGGAT...GGAAACTGAAGTCGAATTGGGCTCCCCTGGAAGGGGTTCATTCAGGTCTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGATGAGCTCCAGAAGCAAATTGTGTTaGAGGAACCCACACCTCCAA +
Preference number: 4 (lower is better)
Translates to: EHSGFKHTWYVRGLVMSSRSKLC*RNPHLQ
Trigger: TTGGAGGTGTGGGTTCCTCCAACACAATTTGCTTCT...GGAGCTCATCACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp CAGGGGCTTCTTGGCAGGGCCTGGCACACTCCATTTGGAAAGAAGACCATGAGATTCTCAAGAGCACTCTaGTTTCAAACACACCTGGTA +
Preference number: 4 (lower is better)
Translates to: QGLLGRAWHTPFGKKTMRFSRAL*FQTHLV
Trigger: TACCAGGTGTGTTTGAAACCAGAGTGCTCTTGAGAA...TCTCATGGTCTTCTTTCCAAATGGAGTGTGCCAGGCCCTGCCAAGAAGCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGATGAGCTCCCTGGCACACTCCATTTaGAAAGAAGACCATGAGACA +
Preference number: 4 (lower is better)
Translates to: EHSGFKHTWYVRGLVMSSLAHSI*KEDHET
Trigger: TGTCTCATGGTCTTCTTTCCAAATGGAGTGTGCCAG...GGAGCTCATCACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR TCA 90 bp TCTTCTCAAGAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGTTCACTAAGCCAGAGTaGGTTCCAGATGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: SSQEHSGFKHTWYVRGLVFTKPE*VPDGRT
Trigger: TGTCCTTCCATCTGGAACTCACTCTGGCTTAGTGAA...CACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTCTTGAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CCA 90 bp GAAAAGAAATGGAGGGAATCGCAGCAGCCTGTCAGGGTGGACCAAAGGAAAGGGTTTGATGAAGGGACCTaGCTTTTCACAGAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: EKKWRESQQPVRVDQRKGFDEGT*LFTEKP
Trigger: TGGCTTTTCTGTGAAAAGCCAGGTCCCTTCATCAAA...CCCTTTCCTTTGGTCCACCCTGACAGGCTGCTGCGATTCCCTCCATTTCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS GCA 90 bp AGCTCCTTCAGCTCGGTCTCGCCCTGGTGCACGAACAGCAGCTGCTaGGGGAGGTCGGCCAGTCCGGGGTCGGCCTCCACGTCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: SSFSSVSPWCTNSSC*GRSASPGSASTSPA
Trigger: GGCGGGCGACGTGGAGGCCGACCCCGGACTGGCCGACCTCCCGCAGCAGCTGCTGTTCGTGCACCAGGGCGAGACCGAGCTGAAGGAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS GCA 90 bp TCCGGGGTCGGCCTCCACGTCGCCCGCCTCAGGGTCCCGCTCCACTaGCAGGTCCCACTGTGTGATCTGGTGGTCTGCACCCGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: SGVGLHVARLRVPLH*QVPLCDLVVCTRGC
Trigger: GCAGCCTCGGGTGCAGACCACCAGATCACACAGTGGGACCTGGCAGTGGAGCGGGACCCTGAGGCGGGCGACGTGGAGGCCGACCCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS CCA 90 bp GGGCACTGCGGGTGCCAGTGCAGCTCCTTCAGCTCGGTCTCGCCCTaGTGCACGAACAGCAGCTGCTGCGGGAGGTCGGCCAGTCCGGGG +
Preference number: 5 (lower is better)
Translates to: GHCGCQCSSFSSVSP*CTNSSCCGRSASPG
Trigger: CCCCGGACTGGCCGACCTCCCGCAGCAGCTGCTGTTCGTGCACCAGGGCGAGACCGAGCTGAAGGAGCTGCACTGGCACCCGCAGTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS GCA 90 bp GACAGCGCCGTGCTGACCAGGAGCCCTGGGCACTGCGGGTGCCAGTaGAGCTCCTTCAGCTCGGTCTCGCCCTGGTGCACGAACAGCAGC +
Preference number: 5 (lower is better)
Translates to: DSAVLTRSPGHCGCQ*SSFSSVSPWCTNSS
Trigger: GCTGCTGTTCGTGCACCAGGGCGAGACCGAGCTGAAGGAGCTGCACTGGCACCCGCAGTGCCCAGGGCTCCTGGTCAGCACGGCGCTGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS CCA 90 bp CCCGCCTCAGGGTCCCGCTCCACTGCCAGGTCCCACTGTGTGATCTaGTGGTCTGCACCCGAGGCTGCAAAGACCCCGCTGTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: PASGSRSTARSHCVI*WSAPEAAKTPLSWG
Trigger: CCCCCAGGACAGCGGGGTCTTTGCAGCCTCGGGTGCAGACCACCAGATCACACAGTGGGACCTGGCAGTGGAGCGGGACCCTGAGGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS TCA 90 bp CGTCGCCCGCCTCAGGGTCCCGCTCCACTGCCAGGTCCCACTGTGTaGTCTGGTGGTCTGCACCCGAGGCTGCAAAGACCCCGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: RRPPQGPAPLPGPTV*SGGLHPRLQRPRCP
Trigger: AGGACAGCGGGGTCTTTGCAGCCTCGGGTGCAGACCACCAGATCACACAGTGGGACCTGGCAGTGGAGCGGGACCCTGAGGCGGGCGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS GCA 90 bp ATGGTGAAGCCTGACAGCGCCGTGCTGACCAGGAGCCCTGGGCACTaGGGGTGCCAGTGCAGCTCCTTCAGCTCGGTCTCGCCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: MVKPDSAVLTRSPGH*GCQCSSFSSVSPWC
Trigger: GCACCAGGGCGAGACCGAGCTGAAGGAGCTGCACTGGCACCCGCAGTGCCCAGGGCTCCTGGTCAGCACGGCGCTGTCAGGCTTCACCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS CCA 90 bp GGCTTCATTTGGGCCTGCTCATCCCGGAGGAAGGCTGCCAGGGCCTaGGGCTCCTCCACCACCTGCAGAAGCCGCCGCAGCGCAAACACC +
Preference number: 5 (lower is better)
Translates to: GFIWACSSRRKAARA*GSSTTCRSRRSANT
Trigger: GGTGTTTGCGCTGCGGCGGCTTCTGCAGGTGGTGGAGGAGCCCCAGGCCCTGGCAGCCTTCCTCCGGGATGAGCAGGCCCAAATGAAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS CCA 90 bp CACTGCAGGTCCTCCACAGAGCGTGTGTGGCCCACGAATGGCCGCTaGTCCACGTGCCAGGAGCCGCCGTCCGTAGGTGTCCAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: HCRSSTERVWPTNGR*STCQEPPSVGVQRW
Trigger: CCACCTCTGGACACCTACGGACGGCGGCTCCTGGCACGTGGACCAGCGGCCATTCGTGGGCCACACACGCTCTGTGGAGGACCTGCAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS CCA 90 bp GCCTCAGGGTCCCGCTCCACTGCCAGGTCCCACTGTGTGATCTGGTaGTCTGCACCCGAGGCTGCAAAGACCCCGCTGTCCTGGGGGTGC +
Preference number: 5 (lower is better)
Translates to: ASGSRSTARSHCVIW*SAPEAAKTPLSWGC
Trigger: GCACCCCCAGGACAGCGGGGTCTTTGCAGCCTCGGGTGCAGACCACCAGATCACACAGTGGGACCTGGCAGTGGAGCGGGACCCTGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS TCA 90 bp CAGTGGGACGCCTCAGACGCTGATGGTGCGGAAGATGGTGAAGCCTaGCAGCGCCGTGCTGACCAGGAGCCCTGGGCACTGCGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: QWDASDADGAEDGEA*QRRADQEPWALRVP
Trigger: TGGCACCCGCAGTGCCCAGGGCTCCTGGTCAGCACGGCGCTGTCAGGCTTCACCATCTTCCGCACCATCAGCGTCTGAGGCGTCCCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS GCA 90 bp TTGTGTCGCCGGACTCGGCTTCCATGGGTTCCCCGGTTTCACACGTaGGCCGCCGACCCTTGCGCGCCGCCATCTTCGAACCCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: LCRRTRLPWVPRFHT*AADPCAPPSSNPLA
Trigger: AGCGAGAGGGTTCGAAGATGGCGGCGCGCAAGGGTCGGCGGCGCACGTGTGAAACCGGGGAACCCATGGAAGCCGAGTCCGGCGACACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS GCA 90 bp AGGGTCCCGCTCCACTGCCAGGTCCCACTGTGTGATCTGGTGGTCTaGACCCGAGGCTGCAAAGACCCCGCTGTCCTGGGGGTGCCACTC +
Preference number: 5 (lower is better)
Translates to: RVPLHCQVPLCDLVV*TRGCKDPAVLGVPL
Trigger: GAGTGGCACCCCCAGGACAGCGGGGTCTTTGCAGCCTCGGGTGCAGACCACCAGATCACACAGTGGGACCTGGCAGTGGAGCGGGACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS CCA 90 bp GTGTTCTCAGTCGGTGACCACTGCAGGTCCTCCACAGAGCGTGTGTaGCCCACGAATGGCCGCTGGTCCACGTGCCAGGAGCCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: VFSVGDHCRSSTERV*PTNGRWSTCQEPPS
Trigger: GGACGGCGGCTCCTGGCACGTGGACCAGCGGCCATTCGTGGGCCACACACGCTCTGTGGAGGACCTGCAGTGGTCACCGACTGAGAACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS CCA 90 bp AAGGGCTCCCGGCGGCTCCAGCTGATGACATTGACGTCCCCATCATaGGCGGTGGCTGTGGTGAGCATGCAGGCCTTGCTGGGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: KGSRRLQLMTLTSPS*AVAVVSMQALLGAA
Trigger: GGCAGCCCCCAGCAAGGCCTGCATGCTCACCACAGCCACCGCCCATGATGGGGACGTCAATGTCATCAGCTGGAGCCGCCGGGAGCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS-3UTR CAA 90 bp GTATGTACGAGGCCTCGTGATGAGCTCCCGACATGCCCACAGCCCCCACTGGACGGAGGCACGTACCTGTaGGGGCGGCCCACCCCCATG +
Preference number: 5 (lower is better)
Translates to: VCTRPRDELPTCPQPPLDGGTYL*GRPTPM
Trigger: CATGGGGGTGGGCCGCCCCAACAGGTACGTGCCTCC...GTCCAGTGGGGGCTGTGGGCATGTCGGGAGCTCATCACGAGGCCTCGTACATAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS GCA 90 bp CACTGCCAGGTCCCACTGTGTGATCTGGTGGTCTGCACCCGAGGCTaGAAAGACCCCGCTGTCCTGGGGGTGCCACTCGACGGAGGTCAC +
Preference number: 5 (lower is better)
Translates to: HCQVPLCDLVVCTRG*KDPAVLGVPLDGGH
Trigger: GTGACCTCCGTCGAGTGGCACCCCCAGGACAGCGGGGTCTTTGCAGCCTCGGGTGCAGACCACCAGATCACACAGTGGGACCTGGCAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp CACAGTTGGGGAACAGGCTCAGGGAACGCCATGAGCTGGCCAGGCCCCCGCAGTCGTGAGGCCAGGGGTTaGAGAACCAGCCTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: HSWGTGSGNAMSWPGPRSREARG*RTSLGK
Trigger: CTTCCCCAGGCTGGTTCTCAAACCCCTGGCCTCACG...ACTGCGGGGGCCTGGCCAGCTCATGGCGTTCCCTGAGCCTGTTCCCCAACTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp GGGAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGGAAGATGGGCTTCATTaGGGCCTGCTCATCCCGGAG +
Preference number: 5 (lower is better)
Translates to: GNLHQGAICGQHGPAPRLEDGLH*GLLIPE
Trigger: CTCCGGGATGAGCAGGCCCAAATGAAGCCCATCTTC...CAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp ACTGGGGCTGAGGTTAGTCCCTTGTCGCAGGTCTCTCAGCCAGTGGGGAGAGGAGTGAGCATGCAGGCCTaGCTGGGGGCTGCCCGGATG +
Preference number: 5 (lower is better)
Translates to: TGAEVSPLSQVSQPVGRGVSMQA*LGAARM
Trigger: CATCCGGGCAGCCCCCAGCAAGGCCTGCATGCTCAC...TCCTCTCCCCACTGGCTGAGAGACCTGCGACAAGGGACTAACCTCAGCCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp CCAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAAACCCCACTGCTCACCTaGGCCGCTCAGGATGCCGGG +
Preference number: 5 (lower is better)
Translates to: PVPPQPREADPLSTSQSQTPLLT*AAQDAG
Trigger: CCCGGCATCCTGAGCGGCCAAGGTGAGCAGTGGGGT...TTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp CAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAACGGGGAAATAGGCTCGTaGCCCAAGGGGGCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: QSHLSPVRQTRCLLPKANGEIGS*PKGAAW
Trigger: CCAGGCCGCCCCCTTGGGCAACGAGCCTATTTCCCC...GTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS GCA 90 bp TCCTCCACAGAGCGTGTGTGGCCCACGAATGGCCGCTGGTCCACGTaGCAGGAGCCGCCGTCCGTAGGTGTCCAGAGGTGGATGTTCTTT +
Preference number: 5 (lower is better)
Translates to: SSTERVWPTNGRWST*QEPPSVGVQRWMFF
Trigger: AAAGAACATCCACCTCTGGACACCTACGGACGGCGGCTCCTGGCACGTGGACCAGCGGCCATTCGTGGGCCACACACGCTCTGTGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS-3UTR CAA 90 bp GGAACCCACACCTCCAATTTGGTGCAGCCACTGTATATCCCCCGAGTCCCCTGCCCGGGCCCTCGGAACTaGTGTCGCCGGACTCGGCTT +
Preference number: 5 (lower is better)
Translates to: GTHTSNLVQPLYIPRVPCPGPRN*CRRTRL
Trigger: AAGCCGAGTCCGGCGACACAAGTTCCGAGGGCCCGG...GCAGGGGACTCGGGGGATATACAGTGGCTGCACCAAATTGGAGGTGTGGGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp GGCGGAGGAGCGAGACAGCGACTAGGGGGCAGGGAGACTGGCAGTGGGGGACGGCAGAAGCAAATTGTGTaGGAGGAACCCACACCTCCA +
Preference number: 5 (lower is better)
Translates to: GGGARQRLGGRETGSGGRQKQIV*EEPTPP
Trigger: TGGAGGTGTGGGTTCCTCCAACACAATTTGCTTCTG...CCGTCCCCCACTGCCAGTCTCCCTGCCCCCTAGTCGCTGTCTCGCTCCTCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS GCA 90 bp TCAGCTGAGCAGGAGGCAAACACCGTGTTCTCAGTCGGTGACCACTaGAGGTCCTCCACAGAGCGTGTGTGGCCCACGAATGGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: SAEQEANTVFSVGDH*RSSTERVWPTNGRW
Trigger: CCAGCGGCCATTCGTGGGCCACACACGCTCTGTGGAGGACCTGCAGTGGTCACCGACTGAGAACACGGTGTTTGCCTCCTGCTCAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS-3UTR CAA 90 bp AGGCCACACAAGTCTCTGGGTGGGAGTGGTCTTACAGAGCCCTGGTTAAACCGAGTGCGCCGCCGACCCTaGCGCGCCGCCATCTTCGAA +
Preference number: 5 (lower is better)
Translates to: RPHKSLGGSGLTEPWLNRVRRRP*RAAIFE
Trigger: TTCGAAGATGGCGGCGCGCAAGGGTCGGCGGCGCAC...TCGGTTTAACCAGGGCTCTGTAAGACCACTCCCACCCAGAGACTTGTGTGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp GGAACCCACACCTCCAATTTGGTGCAGCCACTGTATATCCCCCGAGTCCCCTGCGGGCGGAAGGTTGGGTaGCACTGGACTCCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: GTHTSNLVQPLYIPRVPCGRKVG*HWTPSG
Trigger: GCCACTGGGAGTCCAGTGCAACCCAACCTTCCGCCC...GCAGGGGACTCGGGGGATATACAGTGGCTGCACCAAATTGGAGGTGTGGGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp TCCCACAACCACGCAGGCAGCCTGGCCATTCGCGAGGGTTCATTAGGCCCACTTCCAGTGGGCGGAAGGTaGGGTTGCACTGGACTCCCA +
Preference number: 5 (lower is better)
Translates to: SHNHAGSLAIREGSLGPLPVGGR*GCTGLP
Trigger: TGGGAGTCCAGTGCAACCCAACCTTCCGCCCACTGG...AAGTGGGCCTAATGAACCCTCGCGAATGGCCAGGCTGCCTGCGTGGTTGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS CCA 90 bp AGTCAAGGGCAAAGCCCTCGCCCATGTGTCCAGCGAAGGAGAAGATaGGCTTCATTTGGGCCTGCTCATCCCGGAGGAAGGCTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: SQGQSPRPCVQRRRR*ASFGPAHPGGRLPG
Trigger: CCCTGGCAGCCTTCCTCCGGGATGAGCAGGCCCAAATGAAGCCCATCTTCTCCTTCGCTGGACACATGGGCGAGGGCTTTGCCCTTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS-3UTR CAA 90 bp GGAACCCACACCTCCAATTTGGTGCAGCCACTGTATATCCCCCGAGTCCCCTGCCGAAGGTCCCAGATCTaGAGGGCCCCATCATCCCCG +
Preference number: 5 (lower is better)
Translates to: GTHTSNLVQPLYIPRVPCRRSQI*RAPSSP
Trigger: CGGGGATGATGGGGCCCTCAAGATCTGGGACCTTCG...GCAGGGGACTCGGGGGATATACAGTGGCTGCACCAAATTGGAGGTGTGGGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp GATGGAAGGACACTTAGAGAAGGCAGAACGCGGCGGCACCCAGTGGGCGGAAGGACTGGGGAACCAGACTaGAACTGCCGAAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: DGRTLREGRTRRHPVGGRTGEPD*NCRRSQ
Trigger: CTGGGACCTTCGGCAGTTCAAGTCTGGTTCCCCAGT...CCTTCCGCCCACTGGGTGCCGCCGCGTTCTGCCTTCTCTAAGTGTCCTTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp GGGAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGACCCACACCTCCAATTaGGTGCAGCCACTGTATATC +
Preference number: 5 (lower is better)
Translates to: GNLHQGAICGQHGPAPRLTHTSN*VQPLYI
Trigger: GATATACAGTGGCTGCACCAAATTGGAGGTGTGGGT...CAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp CCAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAAGACCCGCACCCCTCATaGCCTTCAGGGTTCACTGCA +
Preference number: 5 (lower is better)
Translates to: PVPPQPREADPLSTSQSQDPHPS*PSGFTA
Trigger: TGCAGTGAACCCTGAAGGCAATGAGGGGTGCGGGTC...TTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp GAACCTTCACCAGGGGGCCATCTGCGGCCAACATGGCCCAGCTCCCAGGCTGGCCAGGGGTTAAATAATTaGTGCTGGAACCTGGGGATC +
Preference number: 5 (lower is better)
Translates to: EPSPGGHLRPTWPSSQAGQGLNN*CWNLGI
Trigger: GATCCCCAGGTTCCAGCACAAATTATTTAACCCCTG...GCCAGCCTGGGAGCTGGGCCATGTTGGCCGCAGATGGCCCCCTGGTGAAGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS GCA 90 bp TCATCACTGCCCTCTGAGGGTGGGGGCTTTGTCCCATGCAGATTGTaGATCCGAAGCATCATCAGTCTGTTGCTCTGGGCGCTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: SSLPSEGGGFVPCRL*IRSIISLLLWALSA
Trigger: GGCTGAGAGCGCCCAGAGCAACAGACTGATGATGCTTCGGATGCACAATCTGCATGGGACAAAGCCCCCACCCTCAGAGGGCAGTGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS-3UTR CAA 90 bp CAGGGGCTTCTTGGCAGGGCCTGGCACACTCCATTTGGAAAGAAGACCATGAGAGCAGGAGGAGGGGTGTaGAGAGGGTGCCCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: QGLLGRAWHTPFGKKTMRAGGGV*RGCPKK
Trigger: TTTCTTGGGGCACCCTCTCAACACCCCTCCTCCTGC...TCTCATGGTCTTCTTTCCAAATGGAGTGTGCCAGGCCCTGCCAAGAAGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp GGCCCTGTGGTGGGGAACTTCCCAGGAACTGGCTGGATCAGGACAAACCATTCCGGGCTGGACAGCAGGTaGGAAAGCAGAGACTACAGA +
Preference number: 5 (lower is better)
Translates to: GPVVGNFPGTGWIRTNHSGLDSR*ESRDYR
Trigger: TCTGTAGTCTCTGCTTTCCAACCTGCTGTCCAGCCC...GGAATGGTTTGTCCTGATCCAGCCAGTTCCTGGGAAGTTCCCCACCACAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp AGGTCAAATGGGTCACAGCTGACAGGAAGGAATCCGACACACAGGCCACACCAGGCCTCTCACCCCCACTaGCCCATCTCTCACCAAAGC +
Preference number: 5 (lower is better)
Translates to: RSNGSQLTGRNPTHRPHQASHPH*PISHQS
Trigger: GCTTTGGTGAGAGATGGGCAAGTGGGGGTGAGAGGC...CTGGTGTGGCCTGTGTGTCGGATTCCTTCCTGTCAGCTGTGACCCATTTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp CAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAACGTTAAACCGAGTTCTTaGGTGAGAGGGGTCACTGGA +
Preference number: 5 (lower is better)
Translates to: QSHLSPVRQTRCLLPKANVKPSS*VRGVTG
Trigger: TCCAGTGACCCCTCTCACCAAAGAACTCGGTTTAAC...GTTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp TCAACAGACCTGAATGAACCCCTTCCAGGGGAGCCCAATTCGACTTCAGTTTCCTGGCTCAGCGGTGCCTaGCATGGAGGCACGTACCTG +
Preference number: 5 (lower is better)
Translates to: STDLNEPLPGEPNSTSVSWLSGA*HGGTYL
Trigger: CAGGTACGTGCCTCCATGCAAGGCACCGCTGAGCCA...GGAAACTGAAGTCGAATTGGGCTCCCCTGGAAGGGGTTCATTCAGGTCTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp CCAGTCCCACCTCAGCCCCGTGAGGCAGACCCGTTGTCTACTTCCCAAAGCCAAAGGCGGACAGGGCAATaGGGAAAACGAAAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: PVPPQPREADPLSTSQSQRRTGQ*GKRKGE
Trigger: TTCTCCTTTTCGTTTTCCCAATTGCCCTGTCCGCCT...TTGGCTTTGGGAAGTAGACAACGGGTCTGCCTCACGGGGCTGAGGTGGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp TCAACAGACCTGAATGAACCCCTTCCAGGGGAGCCCAATTCGACTTCAGTTTCCATCCTCAGGGGCTTCTaGGCAGGGCCTGGCACACTC +
Preference number: 5 (lower is better)
Translates to: STDLNEPLPGEPNSTSVSILRGF*AGPGTL
Trigger: GAGTGTGCCAGGCCCTGCCAAGAAGCCCCTGAGGAT...GGAAACTGAAGTCGAATTGGGCTCCCCTGGAAGGGGTTCATTCAGGTCTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp ACTGGGGCTGAGGTTAGTCCCTTGTCGCAGGTCTCTCAGCCAGTGGGGAGAGGATTTGTCCCATGCAGATaGTGCATCCGAAGCATCATC +
Preference number: 5 (lower is better)
Translates to: TGAEVSPLSQVSQPVGRGFVPCR*CIRSII
Trigger: GATGATGCTTCGGATGCACAATCTGCATGGGACAAA...TCCTCTCCCCACTGGCTGAGAGACCTGCGACAAGGGACTAACCTCAGCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp GAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGATGAGCTCCCTCCAGCTGATGACATaGACGTCCCCATCATGGGCG +
Preference number: 5 (lower is better)
Translates to: EHSGFKHTWYVRGLVMSSLQLMT*TSPSWA
Trigger: CGCCCATGATGGGGACGTCAATGTCATCAGCTGGAG...GGAGCTCATCACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp AGGCCACACAAGTCTCTGGGTGGGAGTGGTCTTACAGAGCCCTGGTTAAACCGAACGGGCAGAAGCAAATaGTGTTGGAGGAACCCACAC +
Preference number: 5 (lower is better)
Translates to: RPHKSLGGSGLTEPWLNRTGRSK*CWRNPH
Trigger: GTGTGGGTTCCTCCAACACAATTTGCTTCTGCCCGT...TCGGTTTAACCAGGGCTCTGTAAGACCACTCCCACCCAGAGACTTGTGTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp ATCCTGGCCAAACCCAGCTGGCAGGAAGACAACGGGCAGAAGCAAATTGTGTTGAACGTTACCAAACGCTaGGCCCTGTGGTGGGGAACT +
Preference number: 5 (lower is better)
Translates to: ILAKPSWQEDNGQKQIVLNVTKR*ALWWGT
Trigger: AGTTCCCCACCACAGGGCCAAGCGTTTGGTAACGTT...CAACACAATTTGCTTCTGCCCGTTGTCTTCCTGCCAGCTGGGTTTGGCCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp TCAACAGACCTGAATGAACCCCTTCCAGGGGAGCCCAATTCGACTTCAGTTTCCCTTCCTGGTCCTTTATaGCTGCTCAGGAGCCCTGAC +
Preference number: 5 (lower is better)
Translates to: STDLNEPLPGEPNSTSVSLPGPL*LLRSPD
Trigger: GTCAGGGCTCCTGAGCAGCAATAAAGGACCAGGAAG...GGAAACTGAAGTCGAATTGGGCTCCCCTGGAAGGGGTTCATTCAGGTCTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS GCA 90 bp GCTCTTCTTCATCCTCTTCATCTTCCTCCTCTTCTTCTTCATCACTaGCCTCTGAGGGTGGGGGCTTTGTCCCATGCAGATTGTGCATCC +
Preference number: 5 (lower is better)
Translates to: ALLHPLHLPPLLLHH*PLRVGALSHADCAS
Trigger: GGATGCACAATCTGCATGGGACAAAGCCCCCACCCTCAGAGGGCAGTGATGAAGAAGAAGAGGAGGAAGATGAAGAGGATGAAGAAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS-3UTR CAA 90 bp CAGGGCTTAAGGTGCTTCAACTTCGTGTCAAAGTCACTGTCTAATCTGAGGCCAAGCATCATCAGTCTGTaGCTCTGGGCGCTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: QGLRCFNFVSKSLSNLRPSIISL*LWALSA
Trigger: GGCTGAGAGCGCCCAGAGCAACAGACTGATGATGCT...TGGCCTCAGATTAGACAGTGACTTTGACACGAAGTTGAAGCACCTTAAGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp CAGGGCTTAAGGTGCTTCAACTTCGTGTCAAAGTCACTGTCTAATCTGAGGCCACTGAGGGTGGGGGCTTaGTCCCATGCAGATTGTGCA +
Preference number: 5 (lower is better)
Translates to: QGLRCFNFVSKSLSNLRPLRVGA*SHADCA
Trigger: TGCACAATCTGCATGGGACAAAGCCCCCACCCTCAG...TGGCCTCAGATTAGACAGTGACTTTGACACGAAGTTGAAGCACCTTAAGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp GAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGATGAGCTCCTGTAATCCTAGCACTTaGGGAGTCCAACTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: EHSGFKHTWYVRGLVMSSCNPST*GVQLRR
Trigger: CCTCCTGAGTTGGACTCCCAAAGTGCTAGGATTACA...GGAGCTCATCACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS-3UTR CAA 90 bp TCTTCTCAAGAGCACTCTGGTTTCAAACACACCTGGTATGTACGAGGCCTCGTGGAGGTGGATGTTCTTTaGACAGTCACCGGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: SSQEHSGFKHTWYVRGLVEVDVL*TVTGQQ
Trigger: CTGCTGACCGGTGACTGTCAAAAGAACATCCACCTC...CACGAGGCCTCGTACATACCAGGTGTGTTTGAAACCAGAGTGCTCTTGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS CAA 90 bp GCGGCCCCCGGCCGGGCAGGTAGACCTGGGCCGGGCCCTCGGAACTaGTGTCGCCGGACTCGGCTTCCATGGGTTCCCCGGTTTCACACG +
Preference number: 6 (lower is better)
Translates to: AAPGRAGRPGPGPRN*CRRTRLPWVPRFHT
Trigger: CGTGTGAAACCGGGGAACCCATGGAAGCCGAGTCCGGCGACACAAGTTCCGAGGGCCCGGCCCAGGTCTACCTGCCCGGCCGGGGGCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000599949.1
CDS CAA 72 bp GGCCGGGCAGGTAGACCTGGGCCGGGCCCTCGGAACTaGTGTCGCCGGACTCGGCTTCCATGGGTTCCCCGG +
Preference number: 6 (lower is better)
Translates to: GRAGRPGPGPRN*CRRTRLPWVPR
Trigger: CCGGGGAACCCATGGAAGCCGAGTCCGGCGACACAAGTTCCGAGGGCCCGGCCCAGGTCTACCTGCCCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000599949.1
CDS GCA 72 bp GAGCGTGTGTGGCCCACGAATGGCCGCTGGTCCACGTaGCAGGAGCCGCCGTCCGTAGGTGTCCAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: ERVWPTNGRWST*QEPPSVGVQRW
Trigger: CCACCTCTGGACACCTACGGACGGCGGCTCCTGGCACGTGGACCAGCGGCCATTCGTGGGCCACACACGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS CCA 72 bp CTGCAGGTCCTCCACAGAGCGTGTGTGGCCCACGAATaGCCGCTGGTCCACGTGCCAGGAGCCGCCGTCCGT +
Preference number: 6 (lower is better)
Translates to: LQVLHRACVAHE*PLVHVPGAAVR
Trigger: ACGGACGGCGGCTCCTGGCACGTGGACCAGCGGCCATTCGTGGGCCACACACGCTCTGTGGAGGACCTGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS CCA 72 bp GGGTGCCAGTGCAGCTCCTTCAGCTCGGTCTCGCCCTaGTGCACGAACAGCAGCTGCTGCGGGAGGTCGGCC +
Preference number: 6 (lower is better)
Translates to: GCQCSSFSSVSP*CTNSSCCGRSA
Trigger: GGCCGACCTCCCGCAGCAGCTGCTGTTCGTGCACCAGGGCGAGACCGAGCTGAAGGAGCTGCACTGGCACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS GCA 72 bp TGGGTTCCCCGGTTTCACACGTGCGCCGCCGACCCTTaGGCGCCGCCATCTTCGAACCCTCTCGCTGCTGAC +
Preference number: 6 (lower is better)
Translates to: WVPRFHTCAADP*APPSSNPLAAD
Trigger: GTCAGCAGCGAGAGGGTTCGAAGATGGCGGCGCGCAAGGGTCGGCGGCGCACGTGTGAAACCGGGGAACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS GCA 72 bp CGGACTCGGCTTCCATGGGTTCCCCGGTTTCACACGTaGGCCGCCGACCCTTGCGCGCCGCCATCTTCGAAC +
Preference number: 6 (lower is better)
Translates to: RTRLPWVPRFHT*AADPCAPPSSN
Trigger: GTTCGAAGATGGCGGCGCGCAAGGGTCGGCGGCGCACGTGTGAAACCGGGGAACCCATGGAAGCCGAGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000599949.1
CDS CCA 72 bp TCCTCCACAGAGCGTGTGTGGCCCACGAATGGCCGCTaGTCCACGTGCCAGGAGCCGCCGTCCGTAGGTGTC +
Preference number: 6 (lower is better)
Translates to: SSTERVWPTNGR*STCQEPPSVGV
Trigger: GACACCTACGGACGGCGGCTCCTGGCACGTGGACCAGCGGCCATTCGTGGGCCACACACGCTCTGTGGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS CAA 90 bp CCGCCACTGAGCAGGAAGGGCTCCCGGCGGCTCCAGCTGATGACATaGACGTCCCCATCATGGGCGGTGGCTGTGGTGAGCATGCAGGCC +
Preference number: 6 (lower is better)
Translates to: PPLSRKGSRRLQLMT*TSPSWAVAVVSMQA
Trigger: GGCCTGCATGCTCACCACAGCCACCGCCCATGATGGGGACGTCAATGTCATCAGCTGGAGCCGCCGGGAGCCCTTCCTGCTCAGTGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS CCA 72 bp GTCGGTGACCACTGCAGGTCCTCCACAGAGCGTGTGTaGCCCACGAATGGCCGCTGGTCCACGTGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: VGDHCRSSTERV*PTNGRWSTCQE
Trigger: CTCCTGGCACGTGGACCAGCGGCCATTCGTGGGCCACACACGCTCTGTGGAGGACCTGCAGTGGTCACCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS CCA 72 bp GGGTCCCGCTCCACTGCCAGGTCCCACTGTGTGATCTaGTGGTCTGCACCCGAGGCTGCAAAGACCCCGCTG +
Preference number: 6 (lower is better)
Translates to: GSRSTARSHCVI*WSAPEAAKTPL
Trigger: CAGCGGGGTCTTTGCAGCCTCGGGTGCAGACCACCAGATCACACAGTGGGACCTGGCAGTGGAGCGGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS CAA 72 bp CCATCATGGGCGGTGGCTGTGGTGAGCATGCAGGCCTaGCTGGGGGCTGCCCGGATGTCCCAGATGCGGATG +
Preference number: 6 (lower is better)
Translates to: PSWAVAVVSMQA*LGAARMSQMRM
Trigger: CATCCGCATCTGGGACATCCGGGCAGCCCCCAGCAAGGCCTGCATGCTCACCACAGCCACCGCCCATGATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS CAA 90 bp TTGACGTCCCCATCATGGGCGGTGGCTGTGGTGAGCATGCAGGCCTaGCTGGGGGCTGCCCGGATGTCCCAGATGCGGATGGAGGCGTCA +
Preference number: 6 (lower is better)
Translates to: LTSPSWAVAVVSMQA*LGAARMSQMRMEAS
Trigger: TGACGCCTCCATCCGCATCTGGGACATCCGGGCAGCCCCCAGCAAGGCCTGCATGCTCACCACAGCCACCGCCCATGATGGGGACGTCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS TCA 72 bp GCCTCAGACGCTGATGGTGCGGAAGATGGTGAAGCCTaGCAGCGCCGTGCTGACCAGGAGCCCTGGGCACTG +
Preference number: 6 (lower is better)
Translates to: ASDADGAEDGEA*QRRADQEPWAL
Trigger: CAGTGCCCAGGGCTCCTGGTCAGCACGGCGCTGTCAGGCTTCACCATCTTCCGCACCATCAGCGTCTGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS GCA 72 bp TGCAGGCCTTGCTGGGGGCTGCCCGGATGTCCCAGATaGGGATGGAGGCGTCAGCTGAGCAGGAGGCAAACA +
Preference number: 6 (lower is better)
Translates to: CRPCWGLPGCPR*GWRRQLSRRQT
Trigger: TGTTTGCCTCCTGCTCAGCTGACGCCTCCATCCGCATCTGGGACATCCGGGCAGCCCCCAGCAAGGCCTGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS GCA 72 bp GGGTGCCACTCGACGGAGGTCACGGGGGCCACGTGCTaGTTGAAGGTGGCCACTGGGGAACCAGACTTGAAC +
Preference number: 6 (lower is better)
Translates to: GCHSTEVTGATC*LKVATGEPDLN
Trigger: GTTCAAGTCTGGTTCCCCAGTGGCCACCTTCAAGCAGCACGTGGCCCCCGTGACCTCCGTCGAGTGGCACCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS GCA 72 bp GTCCCACTGTGTGATCTGGTGGTCTGCACCCGAGGCTaGAAAGACCCCGCTGTCCTGGGGGTGCCACTCGAC +
Preference number: 6 (lower is better)
Translates to: VPLCDLVVCTRG*KDPAVLGVPLD
Trigger: GTCGAGTGGCACCCCCAGGACAGCGGGGTCTTTGCAGCCTCGGGTGCAGACCACCAGATCACACAGTGGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS GCA 72 bp CTCCACTGCCAGGTCCCACTGTGTGATCTGGTGGTCTaGACCCGAGGCTGCAAAGACCCCGCTGTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: LHCQVPLCDLVV*TRGCKDPAVLG
Trigger: CCCCAGGACAGCGGGGTCTTTGCAGCCTCGGGTGCAGACCACCAGATCACACAGTGGGACCTGGCAGTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS CCA 72 bp TCCCGCTCCACTGCCAGGTCCCACTGTGTGATCTGGTaGTCTGCACCCGAGGCTGCAAAGACCCCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: SRSTARSHCVIW*SAPEAAKTPLS
Trigger: GGACAGCGGGGTCTTTGCAGCCTCGGGTGCAGACCACCAGATCACACAGTGGGACCTGGCAGTGGAGCGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS TCA 72 bp CCGCCGTCCGTAGGTGTCCAGAGGTGGATGTTCTTTTaGCAGTCACCGGTCAGCAGGCGACCGGTCACCCGG +
Preference number: 6 (lower is better)
Translates to: PPSVGVQRWMFF*QSPVSRRPVTR
Trigger: CCGGGTGACCGGTCGCCTGCTGACCGGTGACTGTCAAAAGAACATCCACCTCTGGACACCTACGGACGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS CCA 72 bp CGGCGGCTCCAGCTGATGACATTGACGTCCCCATCATaGGCGGTGGCTGTGGTGAGCATGCAGGCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: RRLQLMTLTSPS*AVAVVSMQALL
Trigger: CAGCAAGGCCTGCATGCTCACCACAGCCACCGCCCATGATGGGGACGTCAATGTCATCAGCTGGAGCCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS CCA 72 bp CAGGTTAAAGGCTCGGGATCAGCCACCTCAGGACCCTaGAGTCCGGACTCAGCCCTACCAGTCTGCGCTCGG +
Preference number: 6 (lower is better)
Translates to: QVKGSGSATSGP*SPDSALPVCAR
Trigger: CCGAGCGCAGACTGGTAGGGCTGAGTCCGGACTCCAGGGTCCTGAGGTGGCTGATCCCGAGCCTTTAACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599949.1
CDS CAA 72 bp GCCGCCGTCCGTAGGTGTCCAGAGGTGGATGTTCTTTaGACAGTCACCGGTCAGCAGGCGACCGGTCACCCG +
Preference number: 6 (lower is better)
Translates to: AAVRRCPEVDVL*TVTGQQATGHP
Trigger: CGGGTGACCGGTCGCCTGCTGACCGGTGACTGTCAAAAGAACATCCACCTCTGGACACCTACGGACGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS CAA 72 bp TGCCACTCGACGGAGGTCACGGGGGCCACGTGCTGCTaGAAGGTGGCCACTGGGGAACCAGACTTGAACTGC +
Preference number: 6 (lower is better)
Translates to: CHSTEVTGATCC*KVATGEPDLNC
Trigger: GCAGTTCAAGTCTGGTTCCCCAGTGGCCACCTTCAAGCAGCACGTGGCCCCCGTGACCTCCGTCGAGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS CAA 72 bp GCCCATGTGTCCAGCGAAGGAGAAGATGGGCTTCATTaGGGCCTGCTCATCCCGGAGGAAGGCTGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: AHVSSEGEDGLH*GLLIPEEGCQG
Trigger: GCCCTGGCAGCCTTCCTCCGGGATGAGCAGGCCCAAATGAAGCCCATCTTCTCCTTCGCTGGACACATGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS TCA 72 bp GGTTGTCTCCCAGGTGATCCCGGACTATGTCAAAGCTaGGACAGGGGGCGCCAGTCTGCGCTCGGTGGTAGA +
Preference number: 6 (lower is better)
Translates to: GCLPGDPGLCQS*DRGRQSALGGR
Trigger: TCTACCACCGAGCGCAGACTGGCGCCCCCTGTCTCAGCTTTGACATAGTCCGGGATCACCTGGGAGACAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253237.10
CDS TCA 72 bp GGTTGTCTCCCAGGTGATCCCGGACTATGTCAAAGCTaGGACAGGGGGCGCCTTGGAAACTCCTGGGACCGC +
Preference number: 6 (lower is better)
Translates to: GCLPGDPGLCQS*DRGRLGNSWDR
Trigger: GCGGTCCCAGGAGTTTCCAAGGCGCCCCCTGTCTCAGCTTTGACATAGTCCGGGATCACCTGGGAGACAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598711.1
CDS GCA 72 bp CAGGAGGCAAACACCGTGTTCTCAGTCGGTGACCACTaGAGGTCCTCCACAGAGCGTGTGTGGCCCACGAAT +
Preference number: 6 (lower is better)
Translates to: QEANTVFSVGDH*RSSTERVWPTN
Trigger: ATTCGTGGGCCACACACGCTCTGTGGAGGACCTGCAGTGGTCACCGACTGAGAACACGGTGTTTGCCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS GCA 72 bp CCCTCTGAGGGTGGGGGCTTTGTCCCATGCAGATTGTaGATCCGAAGCATCATCAGTCTGTTGCTCTGGGCG +
Preference number: 6 (lower is better)
Translates to: PSEGGGFVPCRL*IRSIISLLLWA
Trigger: CGCCCAGAGCAACAGACTGATGATGCTTCGGATGCACAATCTGCATGGGACAAAGCCCCCACCCTCAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS TCA 72 bp AGTGTAAGAGGAAGCTCTGTCCGGTTGTCTCCCAGGTaGTCCCGGACTATGTCAAAGCTGAGACAGGGGGCG +
Preference number: 6 (lower is better)
Translates to: SVRGSSVRLSPR*SRTMSKLRQGA
Trigger: CGCCCCCTGTCTCAGCTTTGACATAGTCCGGGATCACCTGGGAGACAACCGGACAGAGCTTCCTCTTACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253237.10
ENST00000598711.1
ENST00000599949.1
CDS CAA 72 bp CTGCCCTCTGAGGGTGGGGGCTTTGTCCCATGCAGATaGTGCATCCGAAGCATCATCAGTCTGTTGCTCTGG +
Preference number: 6 (lower is better)
Translates to: LPSEGGGFVPCR*CIRSIISLLLW
Trigger: CCAGAGCAACAGACTGATGATGCTTCGGATGCACAATCTGCATGGGACAAAGCCCCCACCCTCAGAGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS CAA 90 bp TCTTCATCACTGCCCTCTGAGGGTGGGGGCTTTGTCCCATGCAGATaGTGCATCCGAAGCATCATCAGTCTGTTGCTCTGGGCGCTCTCA +
Preference number: 6 (lower is better)
Translates to: SSSLPSEGGGFVPCR*CIRSIISLLLWALS
Trigger: TGAGAGCGCCCAGAGCAACAGACTGATGATGCTTCGGATGCACAATCTGCATGGGACAAAGCCCCCACCCTCAGAGGGCAGTGATGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253237.10
ENST00000598711.1
CDS CCA 72 bp CTTCAGTTTCCAAGCAGGAAGCAAGATCAGAGCCAGTaGGACGCCTCAGACGCTGATGGTGCGGAAGATGGT +
Preference number: 6 (lower is better)
Translates to: LQFPSRKQDQSQ*DASDADGAEDG
Trigger: ACCATCTTCCGCACCATCAGCGTCTGAGGCGTCCCACTGGCTCTGATCTTGCTTCCTGCTTGGAAACTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253237.10