RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRM8 (Homo sapiens)

Ensembl gene IDs: ENSG00000179603

Ensembl transcript IDs: ENST00000339582.7, ENST00000341617.7, ENST00000358373.7, ENST00000412160.1, ENST00000423518.5, ENST00000448250.6, ENST00000457830.1, ENST00000465800.1, ENST00000465844.1, ENST00000472701.5, ENST00000473254.1, ENST00000480995.5, ENST00000495315.1

Found 437 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATGCTGGACTAATGAACTTGGGCGCTGTGACAGATTTCTTCCCCTaGTCAAATATTCGGTGGATACGGTTTGTTTTGGTCAGAAGGGCT +
Preference number: 1 (lower is better)
Translates to: DAGLMNLGAVTDFFP*SNIRWIRFVLVRRA
Trigger: AGCCCTTCTGACCAAAACAAACCGTATCCACCGAATATTTGAGCAGGGGAAGAAATCTGTCACAGCGCCCAAGTTCATTAGTCCAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR CCA 90 bp CAGAGTTCACTTTTCACCTCGCCATTTGGTCTGTCATTTCCTTTTTaGATCAGTTTGCTTTGCATGGTGGCAGCTGTCACCACAGCCTTG +
Preference number: 1 (lower is better)
Translates to: QSSLFTSPFGLSFPF*ISLLCMVAAVTTAL
Trigger: CAAGGCTGTGGTGACAGCTGCCACCATGCAAAGCAAACTGATCCAAAAAGGAAATGACAGACCAAATGGCGAGGTGAAAAGTGAACTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR TCA 90 bp TTTGGATCAGTTTGCTTTGCATGGTGGCAGCTGTCACCACAGCCTTaGAGCTCCTCTTGCGTTTTTGAACATTCTGTTCTGGATGAAAAA +
Preference number: 1 (lower is better)
Translates to: FGSVCFAWWQLSPQP*SSSCVFEHSVLDEK
Trigger: TTTTTCATCCAGAACAGAATGTTCAAAAACGCAAGAGGAGCTTCAAGGCTGTGGTGACAGCTGCCACCATGCAAAGCAAACTGATCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR TCA 90 bp CATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTaGATGATTGCTGTAACTGATATATGTTGTCTTGGTAGAGGAAGC +
Preference number: 1 (lower is better)
Translates to: HIPHLFRLCHFPVSD*MIAVTDICCLGRGS
Trigger: GCTTCCTCTACCAAGACAACATATATCAGTTACAGCAATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
3UTR TCA 90 bp CATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTaGATGATTGCTGTAACTGATATATGTTGTCTTGGTAGAGGAAGT +
Preference number: 1 (lower is better)
Translates to: HIPHLFRLCHFPVSD*MIAVTDICCLGRGS
Trigger: ACTTCCTCTACCAAGACAACATATATCAGTTACAGCAATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR TCA 90 bp CATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTaGATGATTGCTGTAACTGATATATGTTGTCTTGGTAGAGGAAGA +
Preference number: 1 (lower is better)
Translates to: HIPHLFRLCHFPVSD*MIAVTDICCLGRGR
Trigger: TCTTCCTCTACCAAGACAACATATATCAGTTACAGCAATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358373.7
3UTR CCA 90 bp TTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTaGTTGAGCACAGATTTCTGTGTATTGTTATCATGTGCTTTTTCC +
Preference number: 1 (lower is better)
Translates to: FIDTKMGFNRSVKFY*LSTDFCVLLSCAFS
Trigger: GGAAAAAGCACATGATAACAATACACAGAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472701.5
3UTR-3UTR GCA 90 bp TGTTGGGTCTCTGATCCAGAGGGCAAAGTTCACAGGACAGCTCATCCACCTGGTTCACAGCGTTCACAGTaGCAGCAGCAAGGGACCCCT +
Preference number: 2 (lower is better)
Translates to: CWVSDPEGKVHRTAHPPGSQRSQ*QQQGTP
Trigger: AGGGGTCCCTTGCTGCTGGCACTGTGAACGCTGTGA...ACCAGGTGGATGAGCTGTCCTGTGAACTTTGCCCTCTGGATCAGAGACCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR GCA 90 bp ATGGTAAATCCAATAGGTTTGGCTTCATTGAAAGTCTCTGGGACACCTCTCGTTGCTTACACGGCAGGCTaGAGACAGACGCCGGGTGAG +
Preference number: 2 (lower is better)
Translates to: MVNPIGLASLKVSGTPLVAYTAG*RQTPGE
Trigger: CTCACCCGGCGTCTGTCTGCAGCCTGCCGTGTAAGC...AACGAGAGGTGTCCCAGAGACTTTCAATGAAGCCAAACCTATTGGATTTACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR CCA 90 bp AAACAGACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTTTTCTTCCTCTCCCCTaGCTTACACGGCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: KQTHCLIQVKQCGTGTGVFLPLP*LTRQAA
Trigger: TGCAGCCTGCCGTGTAAGCCAGGGGAGAGGAAGAAA...AACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGTCTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR CCA 90 bp TGTAGTCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTCAGTTTGCTTTGCATaGTGGCAGCTGTCACCACAG +
Preference number: 2 (lower is better)
Translates to: CSLRRSPGVNFCGLMFIISVCFA*WQLSPQ
Trigger: CTGTGGTGACAGCTGCCACCATGCAAAGCAAACTGA...AATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGACTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR TCA 90 bp CTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAATGGTCCAGTGGCCGATaGCTTTGTACTCTGTGCTTT +
Preference number: 2 (lower is better)
Translates to: LIQVKQCGTGTGVLTITEWSSGR*LCTLCF
Trigger: AAAGCACAGAGTACAAAGTCATCGGCCACTGGACCA...TTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR GCA 90 bp ATGGTAAATCCAATAGGTTTGGCTTCATTGAAAGTCTCTGGGACACCTCTCGTTGATCACCAGCTGAGATaGTGGACTAATGAACTTGGG +
Preference number: 2 (lower is better)
Translates to: MVNPIGLASLKVSGTPLVDHQLR*WTNELG
Trigger: CCCAAGTTCATTAGTCCAGCATCTCAGCTGGTGATC...AACGAGAGGTGTCCCAGAGACTTTCAATGAAGCCAAACCTATTGGATTTACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR CCA 90 bp CCTTTTTGGATCAGTTTGCTTTGCATGGTGGCAGCTGTCACCACAGCCTTGAAGGTAAGTGTTGTTGTCTaGATGTACATCTTTTCTGCT +
Preference number: 2 (lower is better)
Translates to: PFWISLLCMVAAVTTALKVSVVV*MYIFSA
Trigger: AGCAGAAAAGATGTACATCCAGACAACAACACTTAC...CTTCAAGGCTGTGGTGACAGCTGCCACCATGCAAAGCAAACTGATCCAAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR TCA 90 bp CGTCGGAAGGAGCATATGATTGTATCTGGTGCTGCAATCATTAAAAACGTGATTTTCATGTTGGGTCTCTaGTCCAGAGGGCAAAGTTCA +
Preference number: 2 (lower is better)
Translates to: RRKEHMIVSGAAIIKNVIFMLGL*SRGQSS
Trigger: TGAACTTTGCCCTCTGGATCAGAGACCCAACATGAA...AATCACGTTTTTAATGATTGCAGCACCAGATACAATCATATGCTCCTTCCGACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR TCA 90 bp AATAGGTTTGGCTTCATTGAAAGTCTCTGGGACACCTCTCGTTTTAATGGCATAGTCGGAAGGAGCATATaGTTGTATCTGGTGCTGCAA +
Preference number: 2 (lower is better)
Translates to: NRFGFIESLWDTSRFNGIVGRSI*LYLVLQ
Trigger: TTGCAGCACCAGATACAATCATATGCTCCTTCCGAC...TATGCCATTAAAACGAGAGGTGTCCCAGAGACTTTCAATGAAGCCAAACCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR CCA 90 bp TGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGGTTTGCTTTGCATGGTaGCAGCTGTCACCACAGCCT +
Preference number: 2 (lower is better)
Translates to: CSSFKIIYHISSDCAISLVCFAW*QLSPQP
Trigger: AGGCTGTGGTGACAGCTGCCACCATGCAAAGCAAAC...CAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR TCA 90 bp AAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAGGAGATCTCCAGGAGTaGATTTTTGCGGTCTCATGT +
Preference number: 2 (lower is better)
Translates to: KLNNVGQEREFSQSQKNTGDLQE*IFAVSC
Trigger: ACATGAGACCGCAAAAATTCACTCCTGGAGATCTCC...TGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
3UTR-3UTR TCA 90 bp ACAGTACAAGTGACCATCAAGAGGATACTGTATCCAAGTGAACAAATGAGTGAGCAAAGGTGGTGGCGATaGTTCCCAATATTGCAACAA +
Preference number: 2 (lower is better)
Translates to: TVQVTIKRILYPSEQMSEQRWWR*FPILQQ
Trigger: TTGTTGCAATATTGGGAATCATCGCCACCACCTTTG...CTCACTCATTTGTTCACTTGGATACAGTATCCTCTTGATGGTCACTTGTACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR TCA 90 bp TCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCACTAAGTTCGCGTCCTaGAGCCCTCACGATAGGTGT +
Preference number: 2 (lower is better)
Translates to: SCSSFKIIYHISSDCAISTKFAS*SPHDRC
Trigger: ACACCTATCGTGAGGGCTTCAGGACGCGAACTTAGT...GGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR TCA 90 bp AAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACATCACTCCCCGTTTATTaGTACTTTTGGCTCATGGCT +
Preference number: 2 (lower is better)
Translates to: KLNNVGQEREFSQSQKNTSLPVY*YFWLMA
Trigger: AGCCATGAGCCAAAAGTATCAATAAACGGGGAGTGA...TGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
3UTR-3UTR TCA 90 bp ATGGTAAATCCAATAGGTTTGGCTTCATTGAAAGTCTCTGGGACACCTCTCGTTATCCAAGTGAACAAATaGGTGAGAGATCAGAAATGT +
Preference number: 2 (lower is better)
Translates to: MVNPIGLASLKVSGTPLVIQVNK*VRDQKC
Trigger: ACATTTCTGATCTCTCACTCATTTGTTCACTTGGAT...AACGAGAGGTGTCCCAGAGACTTTCAATGAAGCCAAACCTATTGGATTTACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR GCA 90 bp AACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATACCAGGAGTGAATTTTTaGGGTCTCATGTTCATCATT +
Preference number: 2 (lower is better)
Translates to: NNVGQEREFSQSQKNTRIPGVNF*GLMFII
Trigger: AATGATGAACATGAGACCGCAAAAATTCACTCCTGG...TATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
3UTR-3UTR GCA 90 bp AAACAGACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCCAGGAGTGAATTTTTaGGGTCTCATGTTCATCATT +
Preference number: 2 (lower is better)
Translates to: KQTHCLIQVKQCGTGTGVPGVNF*GLMFII
Trigger: AATGATGAACATGAGACCGCAAAAATTCACTCCTGG...AACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGTCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
3UTR CAA 90 bp ATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTaGAGCACAGATTTCTGTGTATTGTTATCATGTGCTTTTTCCTGG +
Preference number: 2 (lower is better)
Translates to: IDTKMGFNRSVKFYW*STDFCVLLSCAFSW
Trigger: CCAGGAAAAAGCACATGATAACAATACACAGAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472701.5
3UTR-3UTR GCA 90 bp TCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGTGTATTGTTATCATGTaGTTTTTCCTGGGTGGAATC +
Preference number: 2 (lower is better)
Translates to: SFIDTKMGFNRSVKFYWLCIVIM*FFLGGI
Trigger: GATTCCACCCAGGAAAAAGCACATGATAACAATACA...CAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472701.5
3UTR GCA 72 bp CCGTTTTCTTCCTCTCCCCTGGCTTACACGGCAGGCTaGAGACAGACGCCGGGTGAGTATGTTCTCTATGAG +
Preference number: 3 (lower is better)
Translates to: PFSSSPLAYTAG*RQTPGEYVLYE
Trigger: CTCATAGAGAACATACTCACCCGGCGTCTGTCTGCAGCCTGCCGTGTAAGCCAGGGGAGAGGAAGAAAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR TCA 72 bp ATAAGCTGGCAGCCTGTGCGGTTCATGTTGGGTCTCTaGTCCAGAGGGCAAAGTTCACAGGACAGCTCATCC +
Preference number: 3 (lower is better)
Translates to: ISWQPVRFMLGL*SRGQSSQDSSS
Trigger: GGATGAGCTGTCCTGTGAACTTTGCCCTCTGGATCAGAGACCCAACATGAACCGCACAGGCTGCCAGCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR CAA 90 bp TCCTCTCCCCTGGCTTACACGGCAGGCTGCAGACAGACGCCGGGTGAGTATGTTTCCAGGAGTGAATTTTaGCGGTCTCATGTTCATCAT +
Preference number: 3 (lower is better)
Translates to: SSPLAYTAGCRQTPGEYVSRSEF*RSHVHH
Trigger: ATGATGAACATGAGACCGCAAAAATTCACTCCTGGA...AACATACTCACCCGGCGTCTGTCTGCAGCCTGCCGTGTAAGCCAGGGGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR TCA 72 bp AGCGGACAAAGGTCACGATCACAAAGGTGGTGGCGATaGTTCCCAATATTGCAACAAACACAGGCACCACAG +
Preference number: 3 (lower is better)
Translates to: SGQRSRSQRWWR*FPILQQTQAPQ
Trigger: CTGTGGTGCCTGTGTTTGTTGCAATATTGGGAATCATCGCCACCACCTTTGTGATCGTGACCTTTGTCCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR TCA 72 bp GTTTGCTTTGCATGGTGGCAGCTGTCACCACAGCCTTaGAGCTCCTCTTGCGTTTTTGAACATTCTGTTCTG +
Preference number: 3 (lower is better)
Translates to: VCFAWWQLSPQP*SSSCVFEHSVL
Trigger: CAGAACAGAATGTTCAAAAACGCAAGAGGAGCTTCAAGGCTGTGGTGACAGCTGCCACCATGCAAAGCAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR CAA 90 bp TGTAGTCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTCCTTTTTGGATCAGTTaGCTTTGCATGGTGGCAGCT +
Preference number: 3 (lower is better)
Translates to: CSLRRSPGVNFCGLMFIIPFWIS*LCMVAA
Trigger: AGCTGCCACCATGCAAAGCAAACTGATCCAAAAAGG...AATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGACTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR CAA 90 bp AATAGGTTTGGCTTCATTGAAAGTCTCTGGGACACCTCTCGTTTTAATGGCATAGAATGCCACTCCAATTaGATGATGGGGATAAGCTGG +
Preference number: 3 (lower is better)
Translates to: NRFGFIESLWDTSRFNGIECHSN*MMGISW
Trigger: CCAGCTTATCCCCATCATCAAATTGGAGTGGCATTC...TATGCCATTAAAACGAGAGGTGTCCCAGAGACTTTCAATGAAGCCAAACCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR CCA 72 bp AAGACTCTCACAGAGTTCACTTTTCACCTCGCCATTTaGTCTGTCATTTCCTTTTTGGATCAGTTTGCTTTG +
Preference number: 3 (lower is better)
Translates to: KTLTEFTFHLAI*SVISFLDQFAL
Trigger: CAAAGCAAACTGATCCAAAAAGGAAATGACAGACCAAATGGCGAGGTGAAAAGTGAACTCTGTGAGAGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR CAA 90 bp AAACAGACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTTTCACTCCCCGTTTATaGATACTTTTGGCTCATGGC +
Preference number: 3 (lower is better)
Translates to: KQTHCLIQVKQCGTGTGVFTPRL*ILLAHG
Trigger: GCCATGAGCCAAAAGTATCAATAAACGGGGAGTGAA...AACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGTCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
3UTR-3UTR CAA 90 bp AAACAGACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTTCCAGGAGTGAATTTTaGCGGTCTCATGTTCATCAT +
Preference number: 3 (lower is better)
Translates to: KQTHCLIQVKQCGTGTGVSRSEF*RSHVHH
Trigger: ATGATGAACATGAGACCGCAAAAATTCACTCCTGGA...AACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGTCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
3UTR-3UTR CAA 90 bp AGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCAGTGGCCGATGACTTaGTACTCTGTGCTTTTGTTG +
Preference number: 3 (lower is better)
Translates to: RSEFLRSHVHHLRSYTTSQWPMT*YSVLLL
Trigger: CAACAAAAGCACAGAGTACAAAGTCATCGGCCACTG...AGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR CCA 72 bp GGTAAATCCAATAGGTTTGGCTTCATTGAAAGTCTCTaGGACACCTCTCGTTTTAATGGCATAAACAGTACA +
Preference number: 3 (lower is better)
Translates to: GKSNRFGFIESL*DTSRFNGINST
Trigger: TGTACTGTTTATGCCATTAAAACGAGAGGTGTCCCAGAGACTTTCAATGAAGCCAAACCTATTGGATTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341617.7
3UTR-3UTR CAA 90 bp ACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAAGACTGACTATTGATTaGATTGATTGTAGTCTACGG +
Preference number: 3 (lower is better)
Translates to: THCLIQVKQCGTGTGVLTRLTID*IDCSLR
Trigger: CCGTAGACTACAATCAATCAAATCAATAGTCAGTCT...TGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
3UTR-3UTR CAA 90 bp CTTACAAGACTGACTATTGATTTGATTGATTGTAGTCTACGGAGATCTCCAGGAAGACTGACTATTGATTaGATTGATTGTAGTCTACGG +
Preference number: 3 (lower is better)
Translates to: LTRLTIDLIDCSLRRSPGRLTID*IDCSLR
Trigger: CCGTAGACTACAATCAATCAAATCAATAGTCAGTCT...TCCTGGAGATCTCCGTAGACTACAATCAATCAAATCAATAGTCAGTCTTGTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
3UTR CCA 72 bp ACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTaGTTGAGCACAGATTTCTGTGTATTGTTATCATGT +
Preference number: 3 (lower is better)
Translates to: TKMGFNRSVKFY*LSTDFCVLLSC
Trigger: ACATGATAACAATACACAGAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR GCA 90 bp TCCTCTCCCCTGGCTTACACGGCAGGCTGCAGACAGACGCCGGGTGAGTATGTTGGACACGGAGCTTGCTaGAGCACCTATGACGCCAGA +
Preference number: 4 (lower is better)
Translates to: SSPLAYTAGCRQTPGEYVGHGAC*STYDAR
Trigger: TCTGGCGTCATAGGTGCTGCAGCAAGCTCCGTGTCC...AACATACTCACCCGGCGTCTGTCTGCAGCCTGCCGTGTAAGCCAGGGGAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR TCA 90 bp TCCTCTCCCCTGGCTTACACGGCAGGCTGCAGACAGACGCCGGGTGAGTATGTTTTCATGTTGGGTCTCTaGTCCAGAGGGCAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: SSPLAYTAGCRQTPGEYVFMLGL*SRGQSS
Trigger: TGAACTTTGCCCTCTGGATCAGAGACCCAACATGAA...AACATACTCACCCGGCGTCTGTCTGCAGCCTGCCGTGTAAGCCAGGGGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR GCA 90 bp CCTTTTTGGATCAGTTTGCTTTGCATGGTGGCAGCTGTCACCACAGCCTTGAAGGCTTACACGGCAGGCTaGAGACAGACGCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PFWISLLCMVAAVTTALKAYTAG*RQTPGE
Trigger: CTCACCCGGCGTCTGTCTGCAGCCTGCCGTGTAAGC...CTTCAAGGCTGTGGTGACAGCTGCCACCATGCAAAGCAAACTGATCCAAAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR CCA 90 bp CCTTTTTGGATCAGTTTGCTTTGCATGGTGGCAGCTGTCACCACAGCCTTGAAGATCTCCCTCGAGATCTaGGTGAAGGCCTCCACACCG +
Preference number: 4 (lower is better)
Translates to: PFWISLLCMVAAVTTALKISLEI*VKASTP
Trigger: CGGTGTGGAGGCCTTCACCCAGATCTCGAGGGAGAT...CTTCAAGGCTGTGGTGACAGCTGCCACCATGCAAAGCAAACTGATCCAAAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR TCA 90 bp CCTTTTTGGATCAGTTTGCTTTGCATGGTGGCAGCTGTCACCACAGCCTTGAAGACAAGGGCAAGAGGCTaGTCGCTTTCCCTCGCATAC +
Preference number: 4 (lower is better)
Translates to: PFWISLLCMVAAVTTALKTRARG*SLSLAY
Trigger: GTATGCGAGGGAAAGCGATCAGCCTCTTGCCCTTGT...CTTCAAGGCTGTGGTGACAGCTGCCACCATGCAAAGCAAACTGATCCAAAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR GCA 90 bp AAACAGACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTAGCGCCGAGCGCGCCTaGCCCCTTCCCGTCACCCTT +
Preference number: 4 (lower is better)
Translates to: KQTHCLIQVKQCGTGTGVSAERA*PLPVTL
Trigger: AAGGGTGACGGGAAGGGGGCAGGCGCGCTCGGCGCT...AACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGTCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358373.7
CDS-3UTR GCA 90 bp TTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCCGGCCGCGATTGGTCTaGGCCCGGCGCCTCCCGATC +
Preference number: 4 (lower is better)
Translates to: FIDTKMGFNRSVKFYWLSRPRLV*ARRLPI
Trigger: GATCGGGAGGCGCCGGGCGCAGACCAATCGCGGCCG...GCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp TCCTCTCCCCTGGCTTACACGGCAGGCTGCAGACAGACGCCGGGTGAGTATGTTTTCCCTGTTTCAGATTaGATGATTGCTGTAACTGAT +
Preference number: 4 (lower is better)
Translates to: SSPLAYTAGCRQTPGEYVFPVSD*MIAVTD
Trigger: ATCAGTTACAGCAATCATTCAATCTGAAACAGGGAA...AACATACTCACCCGGCGTCTGTCTGCAGCCTGCCGTGTAAGCCAGGGGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR TCA 90 bp CCTTTTTGGATCAGTTTGCTTTGCATGGTGGCAGCTGTCACCACAGCCTTGAAGCTGTCACCACAGCCTTaGAGCTCCTCTTGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: PFWISLLCMVAAVTTALKLSPQP*SSSCVF
Trigger: AAAAACGCAAGAGGAGCTTCAAGGCTGTGGTGACAG...CTTCAAGGCTGTGGTGACAGCTGCCACCATGCAAAGCAAACTGATCCAAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR GCA 90 bp CATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCGCTTACACGGCAGGCTaGAGACAGACGCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: HCLIQVKQCGTGTGVLTIAYTAG*RQTPGE
Trigger: CTCACCCGGCGTCTGTCTGCAGCCTGCCGTGTAAGC...GATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp CAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAACGCTTACACGGCAGGCTaGAGACAGACGCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QCGTGTGVLTITEKYKNNAYTAG*RQTPGE
Trigger: CTCACCCGGCGTCTGTCTGCAGCCTGCCGTGTAAGC...GTTATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TTTTTAGCACAACCCAGGGCTTCAATCTGGTCAGCCATTACAAGAAACAGACTCCCCCATCCACCCGTATaGAATGGGCATACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: FLAQPRASIWSAITRNRLPHPPV*NGHTPG
Trigger: GCCAGGAGTATGCCCATTCCATACGGGTGGATGGGG...GAGTCTGTTTCTTGTAATGGCTGACCAGATTGAAGCCCTGGGTTGTGCTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TCCTTTTTGGATCAGTTTGCTTTGCATGGTGGCAGCTGTCACCACAGCCTTGAAGTTTGCTTTGCATGGTaGCAGCTGTCACCACAGCCT +
Preference number: 4 (lower is better)
Translates to: SFLDQFALHGGSCHHSLEVCFAW*QLSPQP
Trigger: AGGCTGTGGTGACAGCTGCCACCATGCAAAGCAAAC...TTCAAGGCTGTGGTGACAGCTGCCACCATGCAAAGCAAACTGATCCAAAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR CCA 90 bp ACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACACAGCGGCCGCACTTGTaGCTGATCTCTGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: THCLIQVKQCGTGTGVLTQRPHL*LISGLR
Trigger: CCTCAGCCCAGAGATCAGCCACAAGTGCGGCCGCTG...TGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339582.7
CDS-3UTR TCA 90 bp TCCTTTTTGGATCAGTTTGCTTTGCATGGTGGCAGCTGTCACCACAGCCTTGAATCTTGTCGGGCTTGGTaGAAATGGGTGGATCTCCAT +
Preference number: 4 (lower is better)
Translates to: SFLDQFALHGGSCHHSLESCRAW*KWVDLH
Trigger: ATGGAGATCCACCCATTTTCACCAAGCCCGACAAGA...TTCAAGGCTGTGGTGACAGCTGCCACCATGCAAAGCAAACTGATCCAAAAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR TCA 90 bp AAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACACCCTCGAGATCTGGGTaGAGGCCTCCACACCGCTCT +
Preference number: 4 (lower is better)
Translates to: KLNNVGQEREFSQSQKNTPSRSG*RPPHRS
Trigger: AGAGCGGTGTGGAGGCCTTCACCCAGATCTCGAGGG...TGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp CTTACAAGACTGACTATTGATTTGATTGATTGTAGTCTACGGAGATCTCCAGGACCCTCGAGATCTGGGTaGAGGCCTCCACACCGCTCT +
Preference number: 4 (lower is better)
Translates to: LTRLTIDLIDCSLRRSPGPSRSG*RPPHRS
Trigger: AGAGCGGTGTGGAGGCCTTCACCCAGATCTCGAGGG...TCCTGGAGATCTCCGTAGACTACAATCAATCAAATCAATAGTCAGTCTTGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp TCCTTTTTGGATCAGTTTGCTTTGCATGGTGGCAGCTGTCACCACAGCCTTGAATGGTCCAGTGGCCGATaGCTTTGTACTCTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: SFLDQFALHGGSCHHSLEWSSGR*LCTLCF
Trigger: AAAGCACAGAGTACAAAGTCATCGGCCACTGGACCA...TTCAAGGCTGTGGTGACAGCTGCCACCATGCAAAGCAAACTGATCCAAAAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR CCA 90 bp TGTTGGGTCTCTGATCCAGAGGGCAAAGTTCACAGGACAGCTCATCCACCTGGTGCAGGGCGTAAGCCATaGAATATACAGCATCAATTA +
Preference number: 4 (lower is better)
Translates to: CWVSDPEGKVHRTAHPPGAGRKP*NIQHQL
Trigger: TAATTGATGCTGTATATTCCATGGCTTACGCCCTGC...ACCAGGTGGATGAGCTGTCCTGTGAACTTTGCCCTCTGGATCAGAGACCCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR TCA 90 bp TTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGCCCTCGAGATCTGGGTaGAGGCCTCCACACCGCTCT +
Preference number: 4 (lower is better)
Translates to: LRSYTTSLQIVPFPCFRLPSRSG*RPPHRS
Trigger: AGAGCGGTGTGGAGGCCTTCACCCAGATCTCGAGGG...CAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp TCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGAATGATGCTTACACGGCAGGCTaGAGACAGACGCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SYTTSLQIVPFPCFRLNDAYTAG*RQTPGE
Trigger: CTCACCCGGCGTCTGTCTGCAGCCTGCCGTGTAAGC...ATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341617.7
ENST00000358373.7
ENST00000472701.5
CDS-3UTR GCA 90 bp CAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACTCACAGCGTTCACAGTaGCAGCAGCAAGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: QVKQCGTGTGVLTITEKYSQRSQ*QQQGTP
Trigger: AGGGGTCCCTTGCTGCTGGCACTGTGAACGCTGTGA...GTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp CTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAATCACAGCGTTCACAGTaGCAGCAGCAAGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: LIQVKQCGTGTGVLTITESQRSQ*QQQGTP
Trigger: AGGGGTCCCTTGCTGCTGGCACTGTGAACGCTGTGA...TTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp GGTTTCAAGACTCTCACAGAGTTCACTTTTCACCTCGCCATTTGGTCTGTCATTCACCAGCTGAGATGCTaGACTAATGAACTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: GFKTLTEFTFHLAIWSVIHQLRC*TNELGR
Trigger: GCGCCCAAGTTCATTAGTCCAGCATCTCAGCTGGTG...AATGACAGACCAAATGGCGAGGTGAAAAGTGAACTCTGTGAGAGTCTTGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR CCA 90 bp GGTTTCAAGACTCTCACAGAGTTCACTTTTCACCTCGCCATTTGGTCTGTCATTAACACTCCAAGGAGCTaGACGGAGATGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GFKTLTEFTFHLAIWSVINTPRS*TEMRLK
Trigger: CTTCAGCCTCATCTCCGTCCAGCTCCTTGGAGTGTT...AATGACAGACCAAATGGCGAGGTGAAAAGTGAACTCTGTGAGAGTCTTGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR CCA 90 bp TCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGAATGATCAGCGGCCGCACTTGTaGCTGATCTCTGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SYTTSLQIVPFPCFRLNDQRPHL*LISGLR
Trigger: CCTCAGCCCAGAGATCAGCCACAAGTGCGGCCGCTG...ATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp TCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGCTGAGGGGGCTGAGCTaGCCTAGCAGGCGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: SFIDTKMGFNRSVKFYWLLRGLS*PSRRQV
Trigger: GACTTGGCGCCTGCTAGGCCAGCTCAGCCCCCTCAG...CAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp TTTTTAGCACAACCCAGGGCTTCAATCTGGTCAGCCATTACAAGAAACAGACTCTCTTGTCGGGCTTGGTaGAAATGGGTGGATCTCCAT +
Preference number: 4 (lower is better)
Translates to: FLAQPRASIWSAITRNRLSCRAW*KWVDLH
Trigger: ATGGAGATCCACCCATTTTCACCAAGCCCGACAAGA...GAGTCTGTTTCTTGTAATGGCTGACCAGATTGAAGCCCTGGGTTGTGCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR TCA 90 bp ATTTGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCCCCTCGAGATCTGGGTaGAGGCCTCCACACCGCTCT +
Preference number: 4 (lower is better)
Translates to: ICHSFIDTKMGFNRSVKFPSRSG*RPPHRS
Trigger: AGAGCGGTGTGGAGGCCTTCACCCAGATCTCGAGGG...GAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp GTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAGTGCTCCCGCTCTTaGCCATCGGAAACTCTACAG +
Preference number: 4 (lower is better)
Translates to: VLYKLNNVGQEREFSQSQKCSRS*PSETLQ
Trigger: CTGTAGAGTTTCCGATGGTCAAGAGCGGGAGCACTT...CTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358373.7
CDS-3UTR GCA 90 bp GATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTCACAGCGTTCACAGTaGCAGCAGCAAGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: DTKMGFNRSVKFYWLSTDSQRSQ*QQQGTP
Trigger: AGGGGTCCCTTGCTGCTGGCACTGTGAACGCTGTGA...ATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR GCA 90 bp TTTTTAGCACAACCCAGGGCTTCAATCTGGTCAGCCATTACAAGAAACAGACTCTGGATCAGTTTGCTTTaGATGGTGGCAGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: FLAQPRASIWSAITRNRLWISLL*MVAAVT
Trigger: GGTGACAGCTGCCACCATGCAAAGCAAACTGATCCA...GAGTCTGTTTCTTGTAATGGCTGACCAGATTGAAGCCCTGGGTTGTGCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR GCA 90 bp TGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGAGCAGAATTATTCCCTaGTCCCCGCAGAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: CSSFKIIYHISSDCAISLSRIIP*SPQRAR
Trigger: CCGCGCCCTCTGCGGGGAGCAGGGAATAATTCTGCT...CAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339582.7
CDS-3UTR GCA 90 bp ATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCTGTGTAAGCAGAATTATTCCCTaGTCCCCGCAGAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: MGFNRSVKFYWLSTDFCVSRIIP*SPQRAR
Trigger: CCGCGCCCTCTGCGGGGAGCAGGGAATAATTCTGCT...TACACAGAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR GCA 90 bp CTTACAAGACTGACTATTGATTTGATTGATTGTAGTCTACGGAGATCTCCAGGAAGCGCTTTAAAATCCTaGCGCCGCACGCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LTRLTIDLIDCSLRRSPGSALKS*RRTPSQ
Trigger: CTGACTGGGCGTGCGGCGGCAGGATTTTAAAGCGCT...TCCTGGAGATCTCCGTAGACTACAATCAATCAAATCAATAGTCAGTCTTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358373.7
CDS-3UTR CCA 90 bp CAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAACTTTCTTCCTCTCCCCTaGCTTACACGGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QCGTGTGVLTITEKYKNNFLPLP*LTRQAA
Trigger: TGCAGCCTGCCGTGTAAGCCAGGGGAGAGGAAGAAA...GTTATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp AATAGGTTTGGCTTCATTGAAAGTCTCTGGGACACCTCTCGTTTTAATGGCATACTGTGCGGTTCATGTTaGGTCTCTGATCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: NRFGFIESLWDTSRFNGILCGSC*VSDPEG
Trigger: GCCCTCTGGATCAGAGACCCAACATGAACCGCACAG...TATGCCATTAAAACGAGAGGTGTCCCAGAGACTTTCAATGAAGCCAAACCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR CCA 90 bp CTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAACTGTGCGGTTCATGTTaGGTCTCTGATCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LIQVKQCGTGTGVLTITELCGSC*VSDPEG
Trigger: GCCCTCTGGATCAGAGACCCAACATGAACCGCACAG...TTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TGTAGTCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTAACACTCCAAGGAGCTaGACGGAGATGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: CSLRRSPGVNFCGLMFIINTPRS*TEMRLK
Trigger: CTTCAGCCTCATCTCCGTCCAGCTCCTTGGAGTGTT...AATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGACTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp AAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACATACCATCAGGGCCCATaGGGAAAAGGCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: KLNNVGQEREFSQSQKNTYHQGP*GKGSVG
Trigger: GCCCACAGAGCCTTTTCCCCATGGGCCCTGATGGTA...TGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR TCA 90 bp AAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAACAAGGGCAAGAGGCTaGTCGCTTTCCCTCGCATAC +
Preference number: 4 (lower is better)
Translates to: KLNNVGQEREFSQSQKNTTRARG*SLSLAY
Trigger: GTATGCGAGGGAAAGCGATCAGCCTCTTGCCCTTGT...TGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp CATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCTGCGGACACCCAGAGTaGTGTTGGAAAGGAGATCAG +
Preference number: 4 (lower is better)
Translates to: HCLIQVKQCGTGTGVLTICGHPE*CWKGDQ
Trigger: CTGATCTCCTTTCCAACATCACTCTGGGTGTCCGCA...GATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp CTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAATGCGGACACCCAGAGTaGTGTTGGAAAGGAGATCAG +
Preference number: 4 (lower is better)
Translates to: LIQVKQCGTGTGVLTITECGHPE*CWKGDQ
Trigger: CTGATCTCCTTTCCAACATCACTCTGGGTGTCCGCA...TTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp ACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACATTGCTGCAGCACCTATaGCGCCAGAAATCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: THCLIQVKQCGTGTGVLTLLQHL*RQKSCR
Trigger: CCGACAAGATTTCTGGCGTCATAGGTGCTGCAGCAA...TGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp CAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACTTGCTGCAGCACCTATaGCGCCAGAAATCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: QVKQCGTGTGVLTITEKYLLQHL*RQKSCR
Trigger: CCGACAAGATTTCTGGCGTCATAGGTGCTGCAGCAA...GTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp CAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACACTAAGTTCGCGTCCTaGAGCCCTCACGATAGGTGT +
Preference number: 4 (lower is better)
Translates to: QVKQCGTGTGVLTITEKYTKFAS*SPHDRC
Trigger: ACACCTATCGTGAGGGCTTCAGGACGCGAACTTAGT...GTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp GTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGCTGTCACCACAGCCTTaGAGCTCCTCTTGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: VLYKLNNVGQEREFSQSQLSPQP*SSSCVF
Trigger: AAAAACGCAAGAGGAGCTTCAAGGCTGTGGTGACAG...CTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp TTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCGGACACGGAGCTTGCTaGAGCACCTATGACGCCAGA +
Preference number: 4 (lower is better)
Translates to: FIDTKMGFNRSVKFYWLSGHGAC*STYDAR
Trigger: TCTGGCGTCATAGGTGCTGCAGCAAGCTCCGTGTCC...GCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR GCA 90 bp GATCCAGAGGGCAAAGTTCACAGGACAGCTCATCCACCTGGTAGTTGTAACCTTACAGATTTCTTCCCCTaGTCAAATATTCGGTGGATA +
Preference number: 4 (lower is better)
Translates to: DPEGKVHRTAHPPGSCNLTDFFP*SNIRWI
Trigger: TATCCACCGAATATTTGAGCAGGGGAAGAAATCTGT...AAGGTTACAACTACCAGGTGGATGAGCTGTCCTGTGAACTTTGCCCTCTGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR GCA 90 bp TTTTTAGCACAACCCAGGGCTTCAATCTGGTCAGCCATTACAAGAAACAGACTCGATCACCAGCTGAGATaGTGGACTAATGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: FLAQPRASIWSAITRNRLDHQLR*WTNELG
Trigger: CCCAAGTTCATTAGTCCAGCATCTCAGCTGGTGATC...GAGTCTGTTTCTTGTAATGGCTGACCAGATTGAAGCCCTGGGTTGTGCTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR GCA 90 bp GTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGTGGATCAGTTTGCTTTaGATGGTGGCAGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: VLYKLNNVGQEREFSQSQWISLL*MVAAVT
Trigger: GGTGACAGCTGCCACCATGCAAAGCAAACTGATCCA...CTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TTTTTAGCACAACCCAGGGCTTCAATCTGGTCAGCCATTACAAGAAACAGACTCGGATCCAGTAGAACTTaGCGGTCAAGAGGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: FLAQPRASIWSAITRNRLGSSRT*RSRGRN
Trigger: GTTTCTTCCTCTTGACCGCCAAGTTCTACTGGATCC...GAGTCTGTTTCTTGTAATGGCTGACCAGATTGAAGCCCTGGGTTGTGCTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGATCTCCCTCGAGATCTaGGTGAAGGCCTCCACACCG +
Preference number: 4 (lower is better)
Translates to: CSSFKIIYHISSDCAISLISLEI*VKASTP
Trigger: CGGTGTGGAGGCCTTCACCCAGATCTCGAGGGAGAT...CAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp GAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATATCTCCCTCGAGATCTaGGTGAAGGCCTCCACACCG +
Preference number: 4 (lower is better)
Translates to: EISRSEFLRSHVHHLRSYISLEI*VKASTP
Trigger: CGGTGTGGAGGCCTTCACCCAGATCTCGAGGGAGAT...ATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp ATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCTGTGTAATCTCCCTCGAGATCTaGGTGAAGGCCTCCACACCG +
Preference number: 4 (lower is better)
Translates to: MGFNRSVKFYWLSTDFCVISLEI*VKASTP
Trigger: CGGTGTGGAGGCCTTCACCCAGATCTCGAGGGAGAT...TACACAGAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp CAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACCAGGGTAGAGACATCTaGATCCCTCTTCGGCAACCA +
Preference number: 4 (lower is better)
Translates to: QVKQCGTGTGVLTITEKYQGRDI*IPLRQP
Trigger: TGGTTGCCGAAGAGGGATCCAGATGTCTCTACCCTG...GTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR CCA 90 bp CAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAACAACACTCCAAGGAGCTaGACGGAGATGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QCGTGTGVLTITEKYKNNNTPRS*TEMRLK
Trigger: CTTCAGCCTCATCTCCGTCCAGCTCCTTGGAGTGTT...GTTATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCTACCATCAGGGCCCATaGGGAAAAGGCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: FIDTKMGFNRSVKFYWLSYHQGP*GKGSVG
Trigger: GCCCACAGAGCCTTTTCCCCATGGGCCCTGATGGTA...GCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp TCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGCTTGTGGCTGATCTCTaGGCTGAGGGGGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SFIDTKMGFNRSVKFYWLLVADL*AEGAEL
Trigger: CAGCTCAGCCCCCTCAGCCCAGAGATCAGCCACAAG...CAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp TGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACACAAGGGCAAGAGGCTaGTCGCTTTCCCTCGCATAC +
Preference number: 4 (lower is better)
Translates to: CHSFIDTKMGFNRSVKFYTRARG*SLSLAY
Trigger: GTATGCGAGGGAAAGCGATCAGCCTCTTGCCCTTGT...GTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp AAACAGACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTTGCGGACACCCAGAGTaGTGTTGGAAAGGAGATCAG +
Preference number: 4 (lower is better)
Translates to: KQTHCLIQVKQCGTGTGVCGHPE*CWKGDQ
Trigger: CTGATCTCCTTTCCAACATCACTCTGGGTGTCCGCA...AACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGTCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp ACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCTGCGGACACCCAGAGTaGTGTTGGAAAGGAGATCAG +
Preference number: 4 (lower is better)
Translates to: TKMGFNRSVKFYWLSTDFCGHPE*CWKGDQ
Trigger: CTGATCTCCTTTCCAACATCACTCTGGGTGTCCGCA...GAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp CTTACAAGACTGACTATTGATTTGATTGATTGTAGTCTACGGAGATCTCCAGGAACTAAGTTCGCGTCCTaGAGCCCTCACGATAGGTGT +
Preference number: 4 (lower is better)
Translates to: LTRLTIDLIDCSLRRSPGTKFAS*SPHDRC
Trigger: ACACCTATCGTGAGGGCTTCAGGACGCGAACTTAGT...TCCTGGAGATCTCCGTAGACTACAATCAATCAAATCAATAGTCAGTCTTGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp GTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGGTCGGAAGGAGCATATaGTTGTATCTGGTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: VLYKLNNVGQEREFSQSQVGRSI*LYLVLQ
Trigger: TTGCAGCACCAGATACAATCATATGCTCCTTCCGAC...CTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp CATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCGAAGGGCTGCATAGCTaGAACACATGCCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: HCLIQVKQCGTGTGVLTIEGLHS*NTCQVL
Trigger: TAGGACTTGGCATGTGTTTCAGCTATGCAGCCCTTC...GATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp ATGGTAAATCCAATAGGTTTGGCTTCATTGAAAGTCTCTGGGACACCTCTCGTTAAGGTGATCACCAGCTaGGATGCTGGACTAATGAAC +
Preference number: 4 (lower is better)
Translates to: MVNPIGLASLKVSGTPLVKVITS*DAGLMN
Trigger: GTTCATTAGTCCAGCATCTCAGCTGGTGATCACCTT...AACGAGAGGTGTCCCAGAGACTTTCAATGAAGCCAAACCTATTGGATTTACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR TCA 90 bp CAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAACCTGTCACCACAGCCTTaGAGCTCCTCTTGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: QCGTGTGVLTITEKYKNNLSPQP*SSSCVF
Trigger: AAAAACGCAAGAGGAGCTTCAAGGCTGTGGTGACAG...GTTATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp GTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGGAACATCTGAGGTTCTaGTGTTGGGATGAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: VLYKLNNVGQEREFSQSQEHLRF*CWDEVN
Trigger: GTTGACCTCATCCCAACATCAGAACCTCAGATGTTC...CTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR GCA 90 bp TTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGGACACGGAGCTTGCTaGAGCACCTATGACGCCAGA +
Preference number: 4 (lower is better)
Translates to: FAVSCSSFKIIYHISSDCGHGAC*STYDAR
Trigger: TCTGGCGTCATAGGTGCTGCAGCAAGCTCCGTGTCC...ACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp AGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTTCACAGCGTTCACAGTaGCAGCAGCAAGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: RSEFLRSHVHHLRSYTTSSQRSQ*QQQGTP
Trigger: AGGGGTCCCTTGCTGCTGGCACTGTGAACGCTGTGA...AGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp TGTAGTCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTGGGCATATAGAGCATaGCCAGAGATACTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: CSLRRSPGVNFCGLMFIIWAYRA*PEILKH
Trigger: GTGCTTCAGTATCTCTGGGCATGCTCTATATGCCCA...AATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGACTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGAATGATTTTCTTCCTCTCCCCTaGCTTACACGGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SYTTSLQIVPFPCFRLNDFLPLP*LTRQAA
Trigger: TGCAGCCTGCCGTGTAAGCCAGGGGAGAGGAAGAAA...ATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341617.7
ENST00000358373.7
ENST00000472701.5
CDS-3UTR CCA 90 bp TTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCCTGTGCGGTTCATGTTaGGTCTCTGATCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: FIDTKMGFNRSVKFYWLSLCGSC*VSDPEG
Trigger: GCCCTCTGGATCAGAGACCCAACATGAACCGCACAG...GCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp AACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAGTTTGCTTTGCATGGTaGCAGCTGTCACCACAGCCT +
Preference number: 4 (lower is better)
Translates to: NNVGQEREFSQSQKNTRIVCFAW*QLSPQP
Trigger: AGGCTGTGGTGACAGCTGCCACCATGCAAAGCAAAC...TATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp AAACAGACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTGTTTGCTTTGCATGGTaGCAGCTGTCACCACAGCCT +
Preference number: 4 (lower is better)
Translates to: KQTHCLIQVKQCGTGTGVVCFAW*QLSPQP
Trigger: AGGCTGTGGTGACAGCTGCCACCATGCAAAGCAAAC...AACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGTCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp AATAGGTTTGGCTTCATTGAAAGTCTCTGGGACACCTCTCGTTTTAATGGCATATCAGTTTGCTTTGCATaGTGGCAGCTGTCACCACAG +
Preference number: 4 (lower is better)
Translates to: NRFGFIESLWDTSRFNGISVCFA*WQLSPQ
Trigger: CTGTGGTGACAGCTGCCACCATGCAAAGCAAACTGA...TATGCCATTAAAACGAGAGGTGTCCCAGAGACTTTCAATGAAGCCAAACCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR CCA 90 bp TTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTTACCATCAGGGCCCATaGGGAAAAGGCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: FAVSCSSFKIIYHISSDCYHQGP*GKGSVG
Trigger: GCCCACAGAGCCTTTTCCCCATGGGCCCTGATGGTA...ACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR TCA 90 bp TTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTACAAGGGCAAGAGGCTaGTCGCTTTCCCTCGCATAC +
Preference number: 4 (lower is better)
Translates to: FAVSCSSFKIIYHISSDCTRARG*SLSLAY
Trigger: GTATGCGAGGGAAAGCGATCAGCCTCTTGCCCTTGT...ACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp CAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAACGCATACTCCTGGCTGTaGGTTCTTTGCATCATTGTG +
Preference number: 4 (lower is better)
Translates to: QCGTGTGVLTITEKYKNNAYSWL*VLCIIV
Trigger: CACAATGATGCAAAGAACTCACAGCCAGGAGTATGC...GTTATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp TTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCTTGCTGCAGCACCTATaGCGCCAGAAATCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: FIDTKMGFNRSVKFYWLSLLQHL*RQKSCR
Trigger: CCGACAAGATTTCTGGCGTCATAGGTGCTGCAGCAA...GCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp AAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACATGGTCCAGTGGCCGATaGCTTTGTACTCTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: KLNNVGQEREFSQSQKNTWSSGR*LCTLCF
Trigger: AAAGCACAGAGTACAAAGTCATCGGCCACTGGACCA...TGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp TGTAGTCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTCAAAGGTGGTGGCGATaGTTCCCAATATTGCAACAA +
Preference number: 4 (lower is better)
Translates to: CSLRRSPGVNFCGLMFIIQRWWR*FPILQQ
Trigger: TTGTTGCAATATTGGGAATCATCGCCACCACCTTTG...AATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp GTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTACTAAGTTCGCGTCCTaGAGCCCTCACGATAGGTGT +
Preference number: 4 (lower is better)
Translates to: VHHLRSYTTSLQIVPFPCTKFAS*SPHDRC
Trigger: ACACCTATCGTGAGGGCTTCAGGACGCGAACTTAGT...ACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp TCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGAATGATACTAAGTTCGCGTCCTaGAGCCCTCACGATAGGTGT +
Preference number: 4 (lower is better)
Translates to: SYTTSLQIVPFPCFRLNDTKFAS*SPHDRC
Trigger: ACACCTATCGTGAGGGCTTCAGGACGCGAACTTAGT...ATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341617.7
ENST00000358373.7
ENST00000472701.5
CDS-3UTR TCA 90 bp CATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCGTCGGAAGGAGCATATaGTTGTATCTGGTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: HCLIQVKQCGTGTGVLTIVGRSI*LYLVLQ
Trigger: TTGCAGCACCAGATACAATCATATGCTCCTTCCGAC...GATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp CTTACAAGACTGACTATTGATTTGATTGATTGTAGTCTACGGAGATCTCCAGGAGAAGGGCTGCATAGCTaGAACACATGCCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: LTRLTIDLIDCSLRRSPGEGLHS*NTCQVL
Trigger: TAGGACTTGGCATGTGTTTCAGCTATGCAGCCCTTC...TCCTGGAGATCTCCGTAGACTACAATCAATCAAATCAATAGTCAGTCTTGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp AAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAGAAGGGCTGCATAGCTaGAACACATGCCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: KLNNVGQEREFSQSQKNTEGLHS*NTCQVL
Trigger: TAGGACTTGGCATGTGTTTCAGCTATGCAGCCCTTC...TGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp CAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACGGAGATCTCCAGGAGTaGATTTTTGCGGTCTCATGT +
Preference number: 4 (lower is better)
Translates to: QVKQCGTGTGVLTITEKYGDLQE*IFAVSC
Trigger: ACATGAGACCGCAAAAATTCACTCCTGGAGATCTCC...GTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp CAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACTTTGGTCAGAAGGGCTaGATAGCTGAAACACATGCC +
Preference number: 4 (lower is better)
Translates to: QVKQCGTGTGVLTITEKYFGQKG*IAETHA
Trigger: GGCATGTGTTTCAGCTATGCAGCCCTTCTGACCAAA...GTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp CTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAATTTGGTCAGAAGGGCTaGATAGCTGAAACACATGCC +
Preference number: 4 (lower is better)
Translates to: LIQVKQCGTGTGVLTITEFGQKG*IAETHA
Trigger: GGCATGTGTTTCAGCTATGCAGCCCTTCTGACCAAA...TTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp CAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACGATCACCAGCTGAGATaGTGGACTAATGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: QVKQCGTGTGVLTITEKYDHQLR*WTNELG
Trigger: CCCAAGTTCATTAGTCCAGCATCTCAGCTGGTGATC...GTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp CAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAACTGGGCATATAGAGCATaGCCAGAGATACTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: QCGTGTGVLTITEKYKNNWAYRA*PEILKH
Trigger: GTGCTTCAGTATCTCTGGGCATGCTCTATATGCCCA...GTTATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp TCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATGGGCATATAGAGCATaGCCAGAGATACTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: STEISRSEFLRSHVHHLRWAYRA*PEILKH
Trigger: GTGCTTCAGTATCTCTGGGCATGCTCTATATGCCCA...TCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp GATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTGGATCAGTTTGCTTTaGATGGTGGCAGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: DTKMGFNRSVKFYWLSTDWISLL*MVAAVT
Trigger: GGTGACAGCTGCCACCATGCAAAGCAAACTGATCCA...ATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp TCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGAGGATCCAGTAGAACTTaGCGGTCAAGAGGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: STEISRSEFLRSHVHHLRGSSRT*RSRGRN
Trigger: GTTTCTTCCTCTTGACCGCCAAGTTCTACTGGATCC...TCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTTTTCTTCCTCTCCCCTaGCTTACACGGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: FAVSCSSFKIIYHISSDCFLPLP*LTRQAA
Trigger: TGCAGCCTGCCGTGTAAGCCAGGGGAGAGGAAGAAA...ACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTCTGTGCGGTTCATGTTaGGTCTCTGATCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: FAVSCSSFKIIYHISSDCLCGSC*VSDPEG
Trigger: GCCCTCTGGATCAGAGACCCAACATGAACCGCACAG...ACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp GTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTCACCAGCTGAGATGCTaGACTAATGAACTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: VHHLRSYTTSLQIVPFPCHQLRC*TNELGR
Trigger: GCGCCCAAGTTCATTAGTCCAGCATCTCAGCTGGTG...ACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGCACCAGCTGAGATGCTaGACTAATGAACTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: LRSYTTSLQIVPFPCFRLHQLRC*TNELGR
Trigger: GCGCCCAAGTTCATTAGTCCAGCATCTCAGCTGGTG...CAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGAATGATCACCAGCTGAGATGCTaGACTAATGAACTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: SYTTSLQIVPFPCFRLNDHQLRC*TNELGR
Trigger: GCGCCCAAGTTCATTAGTCCAGCATCTCAGCTGGTG...ATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341617.7
ENST00000358373.7
ENST00000472701.5
CDS-3UTR CCA 90 bp TCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGAATGATGTTTGCTTTGCATGGTaGCAGCTGTCACCACAGCCT +
Preference number: 4 (lower is better)
Translates to: SYTTSLQIVPFPCFRLNDVCFAW*QLSPQP
Trigger: AGGCTGTGGTGACAGCTGCCACCATGCAAAGCAAAC...ATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341617.7
ENST00000358373.7
ENST00000472701.5
CDS-3UTR CCA 90 bp AACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATATCAGTTTGCTTTGCATaGTGGCAGCTGTCACCACAG +
Preference number: 4 (lower is better)
Translates to: NNVGQEREFSQSQKNTRISVCFA*WQLSPQ
Trigger: CTGTGGTGACAGCTGCCACCATGCAAAGCAAACTGA...TATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp ACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCTCAGTTTGCTTTGCATaGTGGCAGCTGTCACCACAG +
Preference number: 4 (lower is better)
Translates to: TKMGFNRSVKFYWLSTDFSVCFA*WQLSPQ
Trigger: CTGTGGTGACAGCTGCCACCATGCAAAGCAAACTGA...GAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp TGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTCTTGTCGGGCTTGGTaGAAATGGGTGGATCTCCAT +
Preference number: 4 (lower is better)
Translates to: CHSFIDTKMGFNRSVKFYSCRAW*KWVDLH
Trigger: ATGGAGATCCACCCATTTTCACCAAGCCCGACAAGA...GTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp CATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCTTCCTGTTCATAAGATaGATCCCGAGCAATTCGCTC +
Preference number: 4 (lower is better)
Translates to: HCLIQVKQCGTGTGVLTIFLFIR*IPSNSL
Trigger: GAGCGAATTGCTCGGGATTCATCTTATGAACAGGAA...GATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp CGTCGGAAGGAGCATATGATTGTATCTGGTGCTGCAATCATTAAAAACGTGATTTTCCTGTTCATAAGATaGATCCCGAGCAATTCGCTC +
Preference number: 4 (lower is better)
Translates to: RRKEHMIVSGAAIIKNVIFLFIR*IPSNSL
Trigger: GAGCGAATTGCTCGGGATTCATCTTATGAACAGGAA...AATCACGTTTTTAATGATTGCAGCACCAGATACAATCATATGCTCCTTCCGACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR TCA 90 bp ATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCTGTGTATGGTCCAGTGGCCGATaGCTTTGTACTCTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: MGFNRSVKFYWLSTDFCVWSSGR*LCTLCF
Trigger: AAAGCACAGAGTACAAAGTCATCGGCCACTGGACCA...TACACAGAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp AAACAGACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTTTCATGTTGGGTCTCTaGTCCAGAGGGCAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: KQTHCLIQVKQCGTGTGVFMLGL*SRGQSS
Trigger: TGAACTTTGCCCTCTGGATCAGAGACCCAACATGAA...AACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp CAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAACCAAAGGTGGTGGCGATaGTTCCCAATATTGCAACAA +
Preference number: 4 (lower is better)
Translates to: QCGTGTGVLTITEKYKNNQRWWR*FPILQQ
Trigger: TTGTTGCAATATTGGGAATCATCGCCACCACCTTTG...GTTATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp AAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAGTCGGAAGGAGCATATaGTTGTATCTGGTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: KLNNVGQEREFSQSQKNTVGRSI*LYLVLQ
Trigger: TTGCAGCACCAGATACAATCATATGCTCCTTCCGAC...TGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp CTTACAAGACTGACTATTGATTTGATTGATTGTAGTCTACGGAGATCTCCAGGAAAGGTGATCACCAGCTaGGATGCTGGACTAATGAAC +
Preference number: 4 (lower is better)
Translates to: LTRLTIDLIDCSLRRSPGKVITS*DAGLMN
Trigger: GTTCATTAGTCCAGCATCTCAGCTGGTGATCACCTT...TCCTGGAGATCTCCGTAGACTACAATCAATCAAATCAATAGTCAGTCTTGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp TCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGAATGATCTGTCACCACAGCCTTaGAGCTCCTCTTGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: SYTTSLQIVPFPCFRLNDLSPQP*SSSCVF
Trigger: AAAAACGCAAGAGGAGCTTCAAGGCTGTGGTGACAG...ATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341617.7
ENST00000358373.7
ENST00000472701.5
CDS-3UTR TCA 90 bp AACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAGGAGATCTCCAGGAGTaGATTTTTGCGGTCTCATGT +
Preference number: 4 (lower is better)
Translates to: NNVGQEREFSQSQKNTRIGDLQE*IFAVSC
Trigger: ACATGAGACCGCAAAAATTCACTCCTGGAGATCTCC...TATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp AAACAGACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTGGAGATCTCCAGGAGTaGATTTTTGCGGTCTCATGT +
Preference number: 4 (lower is better)
Translates to: KQTHCLIQVKQCGTGTGVGDLQE*IFAVSC
Trigger: ACATGAGACCGCAAAAATTCACTCCTGGAGATCTCC...AACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGTCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp CAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACGTTCTGATGTTGGGATaGGGTCAACAATTCATGTCC +
Preference number: 4 (lower is better)
Translates to: QVKQCGTGTGVLTITEKYVLMLG*GQQFMS
Trigger: GGACATGAATTGTTGACCTCATCCCAACATCAGAAC...GTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR TCA 90 bp TCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAAGTGCTCCCGCTCTTaGCCATCGGAAACTCTACAG +
Preference number: 4 (lower is better)
Translates to: SFIDTKMGFNRSVKFYWLKCSRS*PSETLQ
Trigger: CTGTAGAGTTTCCGATGGTCAAGAGCGGGAGCACTT...CAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR GCA 90 bp TGTAGTCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTGTTAATCTGGTCAATTaGATAAAGCATGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: CSLRRSPGVNFCGLMFIIVNLVN*IKHGLQ
Trigger: CTGGAGGCCATGCTTTATGCAATTGACCAGATTAAC...AATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGACTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp ACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCTTTGGTCAGAAGGGCTaGATAGCTGAAACACATGCC +
Preference number: 4 (lower is better)
Translates to: TKMGFNRSVKFYWLSTDFFGQKG*IAETHA
Trigger: GGCATGTGTTTCAGCTATGCAGCCCTTCTGACCAAA...GAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR GCA 90 bp TTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGTGGATCAGTTTGCTTTaGATGGTGGCAGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: LRSHVHHLRSYTTSLQIVWISLL*MVAAVT
Trigger: GGTGACAGCTGCCACCATGCAAAGCAAACTGATCCA...CACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp TCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGACTCCACAGGTGGTATTaGAATCCAAGACCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: STEISRSEFLRSHVHHLRLHRWY*NPRPKV
Trigger: AACTTTGGGTCTTGGATTGCAATACCACCTGTGGAG...TCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR GCA 90 bp ACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACACTCCACAGGTGGTATTaGAATCCAAGACCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: THCLIQVKQCGTGTGVLTLHRWY*NPRPKV
Trigger: AACTTTGGGTCTTGGATTGCAATACCACCTGTGGAG...TGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR CCA 90 bp CAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAACCAATTGCATAAAGCATaGCCTCCAGTCTGTGAATCC +
Preference number: 4 (lower is better)
Translates to: QCGTGTGVLTITEKYKNNQLHKA*PPVCES
Trigger: GGATTCACAGACTGGAGGCCATGCTTTATGCAATTG...GTTATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp ATTTGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCAACACTCCAAGGAGCTaGACGGAGATGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ICHSFIDTKMGFNRSVKFNTPRS*TEMRLK
Trigger: CTTCAGCCTCATCTCCGTCCAGCTCCTTGGAGTGTT...GAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp TTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGTCAGTTTGCTTTGCATaGTGGCAGCTGTCACCACAG +
Preference number: 4 (lower is better)
Translates to: LRSHVHHLRSYTTSLQIVSVCFA*WQLSPQ
Trigger: CTGTGGTGACAGCTGCCACCATGCAAAGCAAACTGA...CACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp CAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACCATTTTCTCCACAGGTaGTATTGCAATCCAAGACCC +
Preference number: 4 (lower is better)
Translates to: QVKQCGTGTGVLTITEKYHFLHR*YCNPRP
Trigger: GGGTCTTGGATTGCAATACCACCTGTGGAGAAAATG...GTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR CCA 90 bp CAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAACCATTTTCTCCACAGGTaGTATTGCAATCCAAGACCC +
Preference number: 4 (lower is better)
Translates to: QCGTGTGVLTITEKYKNNHFLHR*YCNPRP
Trigger: GGGTCTTGGATTGCAATACCACCTGTGGAGAAAATG...GTTATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCACATCTCCAAGCCTTaGGAGTTCCGGGTAAAGTCT +
Preference number: 4 (lower is better)
Translates to: LRSHVHHLRSYTTSLQIVHISKP*EFRVKS
Trigger: AGACTTTACCCGGAACTCCCAAGGCTTGGAGATGTG...CACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358373.7
CDS-3UTR CCA 90 bp GAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATCGCCGACTAAACTTTTaGGGGATCACATCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: EISRSEFLRSHVHHLRSYRRLNF*GITSPS
Trigger: GCTTGGAGATGTGATCCCCCAAAAGTTTAGTCGGCG...ATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358373.7
CDS-3UTR TCA 90 bp CAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAACTTCTTTGCATCATTGTaGGGATCCAGTAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: QCGTGTGVLTITEKYKNNFFASL*GSSRTW
Trigger: CCAAGTTCTACTGGATCCTCACAATGATGCAAAGAA...GTTATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp TTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGGCATACTCCTGGCTGTaGGTTCTTTGCATCATTGTG +
Preference number: 4 (lower is better)
Translates to: LRSHVHHLRSYTTSLQIVAYSWL*VLCIIV
Trigger: CACAATGATGCAAAGAACTCACAGCCAGGAGTATGC...CACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp GAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATGCATACTCCTGGCTGTaGGTTCTTTGCATCATTGTG +
Preference number: 4 (lower is better)
Translates to: EISRSEFLRSHVHHLRSYAYSWL*VLCIIV
Trigger: CACAATGATGCAAAGAACTCACAGCCAGGAGTATGC...ATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp ATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCTGTGTAGCATACTCCTGGCTGTaGGTTCTTTGCATCATTGTG +
Preference number: 4 (lower is better)
Translates to: MGFNRSVKFYWLSTDFCVAYSWL*VLCIIV
Trigger: CACAATGATGCAAAGAACTCACAGCCAGGAGTATGC...TACACAGAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp TTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTTCTTGTCGGGCTTGGTaGAAATGGGTGGATCTCCAT +
Preference number: 4 (lower is better)
Translates to: FAVSCSSFKIIYHISSDCSCRAW*KWVDLH
Trigger: ATGGAGATCCACCCATTTTCACCAAGCCCGACAAGA...ACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp AAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACATTCCTGTTCATAAGATaGATCCCGAGCAATTCGCTC +
Preference number: 4 (lower is better)
Translates to: KLNNVGQEREFSQSQKNTFLFIR*IPSNSL
Trigger: GAGCGAATTGCTCGGGATTCATCTTATGAACAGGAA...TGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp GATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCCTGTTCATAAGATaGATCCCGAGCAATTCGCTC +
Preference number: 4 (lower is better)
Translates to: DTKMGFNRSVKFYWLSTDFLFIR*IPSNSL
Trigger: GAGCGAATTGCTCGGGATTCATCTTATGAACAGGAA...ATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp TCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCTGGTCCAGTGGCCGATaGCTTTGTACTCTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: SCSSFKIIYHISSDCAISWSSGR*LCTLCF
Trigger: AAAGCACAGAGTACAAAGTCATCGGCCACTGGACCA...GGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp TTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCTTCATGTTGGGTCTCTaGTCCAGAGGGCAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: FIDTKMGFNRSVKFYWLSFMLGL*SRGQSS
Trigger: TGAACTTTGCCCTCTGGATCAGAGACCCAACATGAA...GCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp GATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATCAAAGGTGGTGGCGATaGTTCCCAATATTGCAACAA +
Preference number: 4 (lower is better)
Translates to: DTKMGFNRSVKFYWLSTDQRWWR*FPILQQ
Trigger: TTGTTGCAATATTGGGAATCATCGCCACCACCTTTG...ATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp TGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACGTCGGAAGGAGCATATaGTTGTATCTGGTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: CHSFIDTKMGFNRSVKFYVGRSI*LYLVLQ
Trigger: TTGCAGCACCAGATACAATCATATGCTCCTTCCGAC...GTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp TCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGGAAGGGCTGCATAGCTaGAACACATGCCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: SFIDTKMGFNRSVKFYWLEGLHS*NTCQVL
Trigger: TAGGACTTGGCATGTGTTTCAGCTATGCAGCCCTTC...CAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp TTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCAAGGTGATCACCAGCTaGGATGCTGGACTAATGAAC +
Preference number: 4 (lower is better)
Translates to: FIDTKMGFNRSVKFYWLSKVITS*DAGLMN
Trigger: GTTCATTAGTCCAGCATCTCAGCTGGTGATCACCTT...GCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp TTTTTAGCACAACCCAGGGCTTCAATCTGGTCAGCCATTACAAGAAACAGACTCATCCAAGTGAACAAATaGGTGAGAGATCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: FLAQPRASIWSAITRNRLIQVNK*VRDQKC
Trigger: ACATTTCTGATCTCTCACTCATTTGTTCACTTGGAT...GAGTCTGTTTCTTGTAATGGCTGACCAGATTGAAGCCCTGGGTTGTGCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR TCA 90 bp GTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGCATAAACAGTACAAGTaGCCATCAAGAGGATACTGT +
Preference number: 4 (lower is better)
Translates to: VLYKLNNVGQEREFSQSQHKQYK*PSRGYC
Trigger: ACAGTATCCTCTTGATGGTCACTTGTACTGTTTATG...CTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp GTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAACAATTCATGTCCTTaGAATCAGCCTTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: VLYKLNNVGQEREFSQSQNNSCP*NQPCSR
Trigger: TCTGCTACAAGGCTGATTTCAAGGACATGAATTGTT...CTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR GCA 90 bp CTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAATTCGCTCCAGCCCTGTaGATTTCTTTATATGACTGT +
Preference number: 4 (lower is better)
Translates to: LIQVKQCGTGTGVLTITEFAPAL*ISLYDC
Trigger: ACAGTCATATAAAGAAATGCACAGGGCTGGAGCGAA...TTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp CAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAACTTCGCTCCAGCCCTGTaGATTTCTTTATATGACTGT +
Preference number: 4 (lower is better)
Translates to: QCGTGTGVLTITEKYKNNFAPAL*ISLYDC
Trigger: ACAGTCATATAAAGAAATGCACAGGGCTGGAGCGAA...GTTATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp TGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTGGTCAGAAGGGCTaGATAGCTGAAACACATGCC +
Preference number: 4 (lower is better)
Translates to: CSSFKIIYHISSDCAISLFGQKG*IAETHA
Trigger: GGCATGTGTTTCAGCTATGCAGCCCTTCTGACCAAA...CAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp GAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATGATCACCAGCTGAGATaGTGGACTAATGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: EISRSEFLRSHVHHLRSYDHQLR*WTNELG
Trigger: CCCAAGTTCATTAGTCCAGCATCTCAGCTGGTGATC...ATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp TGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACGATCACCAGCTGAGATaGTGGACTAATGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: CHSFIDTKMGFNRSVKFYDHQLR*WTNELG
Trigger: CCCAAGTTCATTAGTCCAGCATCTCAGCTGGTGATC...GTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR GCA 90 bp ACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCCTTTTTGGATCAGTTTaGTTTGCATGGTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TKMGFNRSVKFYWLSTDFLFGSV*FAWWQL
Trigger: CAGCTGCCACCATGCAAAGCAAACTGATCCAAAAAG...GAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp TTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGGGATCCAGTAGAACTTaGCGGTCAAGAGGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: LRSHVHHLRSYTTSLQIVGSSRT*RSRGRN
Trigger: GTTTCTTCCTCTTGACCGCCAAGTTCTACTGGATCC...CACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACGGATCCAGTAGAACTTaGCGGTCAAGAGGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: CHSFIDTKMGFNRSVKFYGSSRT*RSRGRN
Trigger: GTTTCTTCCTCTTGACCGCCAAGTTCTACTGGATCC...GTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp CTTACAAGACTGACTATTGATTTGATTGATTGTAGTCTACGGAGATCTCCAGGACAATTGCATAAAGCATaGCCTCCAGTCTGTGAATCC +
Preference number: 4 (lower is better)
Translates to: LTRLTIDLIDCSLRRSPGQLHKA*PPVCES
Trigger: GGATTCACAGACTGGAGGCCATGCTTTATGCAATTG...TCCTGGAGATCTCCGTAGACTACAATCAATCAAATCAATAGTCAGTCTTGTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp AAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACACAATTGCATAAAGCATaGCCTCCAGTCTGTGAATCC +
Preference number: 4 (lower is better)
Translates to: KLNNVGQEREFSQSQKNTQLHKA*PPVCES
Trigger: GGATTCACAGACTGGAGGCCATGCTTTATGCAATTG...TGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp ACAGTACAAGTGACCATCAAGAGGATACTGTATCCAAGTGAACAAATGAGTGAGAATGGTACTCATTCGTaGACAAAGGCCAATGTATCC +
Preference number: 4 (lower is better)
Translates to: TVQVTIKRILYPSEQMSENGTHS*TKANVS
Trigger: GGATACATTGGCCTTTGTCCACGAATGAGTACCATT...CTCACTCATTTGTTCACTTGGATACAGTATCCTCTTGATGGTCACTTGTACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR CCA 90 bp CAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAACGCTCTTTCCCATCAATaGTACTCATTCGTGGACAAA +
Preference number: 4 (lower is better)
Translates to: QCGTGTGVLTITEKYKNNALSHQ*YSFVDK
Trigger: TTTGTCCACGAATGAGTACCATTGATGGGAAAGAGC...GTTATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp GATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATCATTTTCTCCACAGGTaGTATTGCAATCCAAGACCC +
Preference number: 4 (lower is better)
Translates to: DTKMGFNRSVKFYWLSTDHFLHR*YCNPRP
Trigger: GGGTCTTGGATTGCAATACCACCTGTGGAGAAAATG...ATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp TGTAGTCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTCAGATGACTTACTGTTaGTTTCAAGACTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: CSLRRSPGVNFCGLMFIIQMTYC*FQDSHR
Trigger: TCTGTGAGAGTCTTGAAACCAACAGTAAGTCATCTG...AATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGACTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358373.7
CDS-3UTR TCA 90 bp TTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTTTCATGTTGGGTCTCTaGTCCAGAGGGCAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: FAVSCSSFKIIYHISSDCFMLGL*SRGQSS
Trigger: TGAACTTTGCCCTCTGGATCAGAGACCCAACATGAA...ACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp TTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCAAAGGTGGTGGCGATaGTTCCCAATATTGCAACAA +
Preference number: 4 (lower is better)
Translates to: LRSHVHHLRSYTTSLQIVQRWWR*FPILQQ
Trigger: TTGTTGCAATATTGGGAATCATCGCCACCACCTTTG...CACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp AGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTAAGGTGATCACCAGCTaGGATGCTGGACTAATGAAC +
Preference number: 4 (lower is better)
Translates to: RSEFLRSHVHHLRSYTTSKVITS*DAGLMN
Trigger: GTTCATTAGTCCAGCATCTCAGCTGGTGATCACCTT...AGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp CAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAACCATAAACAGTACAAGTaGCCATCAAGAGGATACTGT +
Preference number: 4 (lower is better)
Translates to: QCGTGTGVLTITEKYKNNHKQYK*PSRGYC
Trigger: ACAGTATCCTCTTGATGGTCACTTGTACTGTTTATG...GTTATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp TGTAGTCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTTCCCTGTTTCAGATTaGATGATTGCTGTAACTGAT +
Preference number: 4 (lower is better)
Translates to: CSLRRSPGVNFCGLMFIIFPVSD*MIAVTD
Trigger: ATCAGTTACAGCAATCATTCAATCTGAAACAGGGAA...AATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGACTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp GTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTCACTCCCCGTTTATTaGTACTTTTGGCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: VHHLRSYTTSLQIVPFPCSLPVY*YFWLMA
Trigger: AGCCATGAGCCAAAAGTATCAATAAACGGGGAGTGA...ACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp TCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGAATGATTCACTCCCCGTTTATTaGTACTTTTGGCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: SYTTSLQIVPFPCFRLNDSLPVY*YFWLMA
Trigger: AGCCATGAGCCAAAAGTATCAATAAACGGGGAGTGA...ATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp TGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACGTTCTGATGTTGGGATaGGGTCAACAATTCATGTCC +
Preference number: 4 (lower is better)
Translates to: CHSFIDTKMGFNRSVKFYVLMLG*GQQFMS
Trigger: GGACATGAATTGTTGACCTCATCCCAACATCAGAAC...GTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp TTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGAACATCTGAGGTTCTaGTGTTGGGATGAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: FAVSCSSFKIIYHISSDCEHLRF*CWDEVN
Trigger: GTTGACCTCATCCCAACATCAGAACCTCAGATGTTC...ACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR TCA 90 bp ATTTGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCGAACATCTGAGGTTCTaGTGTTGGGATGAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: ICHSFIDTKMGFNRSVKFEHLRF*CWDEVN
Trigger: GTTGACCTCATCCCAACATCAGAACCTCAGATGTTC...GAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR GCA 90 bp ACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCGTTAATCTGGTCAATTaGATAAAGCATGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TKMGFNRSVKFYWLSTDFVNLVN*IKHGLQ
Trigger: CTGGAGGCCATGCTTTATGCAATTGACCAGATTAAC...GAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR GCA 90 bp ATTTGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTGGGCATATAGAGCATaGCCAGAGATACTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: ICHSFIDTKMGFNRSVKFWAYRA*PEILKH
Trigger: GTGCTTCAGTATCTCTGGGCATGCTCTATATGCCCA...GAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR GCA 90 bp TCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGAATGATCTTTTTGGATCAGTTTaGTTTGCATGGTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SYTTSLQIVPFPCFRLNDLFGSV*FAWWQL
Trigger: CAGCTGCCACCATGCAAAGCAAACTGATCCAAAAAG...ATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341617.7
ENST00000358373.7
ENST00000472701.5
CDS-3UTR GCA 90 bp CTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAACCAGGAGTGAATTTTTaGGGTCTCATGTTCATCATT +
Preference number: 4 (lower is better)
Translates to: LIQVKQCGTGTGVLTITEPGVNF*GLMFII
Trigger: AATGATGAACATGAGACCGCAAAAATTCACTCCTGG...TTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp CGTCGGAAGGAGCATATGATTGTATCTGGTGCTGCAATCATTAAAAACGTGATTCCAGGAGTGAATTTTTaGGGTCTCATGTTCATCATT +
Preference number: 4 (lower is better)
Translates to: RRKEHMIVSGAAIIKNVIPGVNF*GLMFII
Trigger: AATGATGAACATGAGACCGCAAAAATTCACTCCTGG...AATCACGTTTTTAATGATTGCAGCACCAGATACAATCATATGCTCCTTCCGACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR GCA 90 bp TTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCCTCCACAGGTGGTATTaGAATCCAAGACCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: FIDTKMGFNRSVKFYWLSLHRWY*NPRPKV
Trigger: AACTTTGGGTCTTGGATTGCAATACCACCTGTGGAG...GCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp AAACAGACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTTGGTGAAAATGGGTaGATCTCCATTAGCACACTT +
Preference number: 4 (lower is better)
Translates to: KQTHCLIQVKQCGTGTGVLGENG*ISISTL
Trigger: AAGTGTGCTAATGGAGATCCACCCATTTTCACCAAG...AACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGTCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp ACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCGCAGGGCGTAAGCCATaGAATATACAGCATCAATTA +
Preference number: 4 (lower is better)
Translates to: TKMGFNRSVKFYWLSTDFAGRKP*NIQHQL
Trigger: TAATTGATGCTGTATATTCCATGGCTTACGCCCTGC...GAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp CTTACAAGACTGACTATTGATTTGATTGATTGTAGTCTACGGAGATCTCCAGGAGCTCTTTCCCATCAATaGTACTCATTCGTGGACAAA +
Preference number: 4 (lower is better)
Translates to: LTRLTIDLIDCSLRRSPGALSHQ*YSFVDK
Trigger: TTTGTCCACGAATGAGTACCATTGATGGGAAAGAGC...TCCTGGAGATCTCCGTAGACTACAATCAATCAAATCAATAGTCAGTCTTGTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp AACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAGCTCTTTCCCATCAATaGTACTCATTCGTGGACAAA +
Preference number: 4 (lower is better)
Translates to: NNVGQEREFSQSQKNTRIALSHQ*YSFVDK
Trigger: TTTGTCCACGAATGAGTACCATTGATGGGAAAGAGC...TATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp ATGGTAAATCCAATAGGTTTGGCTTCATTGAAAGTCTCTGGGACACCTCTCGTTTTCATTGAAAGTCTCTaGGACACCTCTCGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: MVNPIGLASLKVSGTPLVFIESL*DTSRFN
Trigger: ATTAAAACGAGAGGTGTCCCAGAGACTTTCAATGAA...AACGAGAGGTGTCCCAGAGACTTTCAATGAAGCCAAACCTATTGGATTTACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR CCA 90 bp TGTAGTCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTGTAAGTGTTGTTGTCTaGATGTACATCTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: CSLRRSPGVNFCGLMFIIVSVVV*MYIFSA
Trigger: AGCAGAAAAGATGTACATCCAGACAACAACACTTAC...AATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGACTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp CTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAATCCAAGTGAACAAATaGGTGAGAGATCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: LIQVKQCGTGTGVLTITEIQVNK*VRDQKC
Trigger: ACATTTCTGATCTCTCACTCATTTGTTCACTTGGAT...TTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp CATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCATCCAAGTGAACAAATaGGTGAGAGATCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: HCLIQVKQCGTGTGVLTIIQVNK*VRDQKC
Trigger: ACATTTCTGATCTCTCACTCATTTGTTCACTTGGAT...GATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp CAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACTTCCCTGTTTCAGATTaGATGATTGCTGTAACTGAT +
Preference number: 4 (lower is better)
Translates to: QVKQCGTGTGVLTITEKYFPVSD*MIAVTD
Trigger: ATCAGTTACAGCAATCATTCAATCTGAAACAGGGAA...GTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp AAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAACAATTCATGTCCTTaGAATCAGCCTTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: KLNNVGQEREFSQSQKNTNNSCP*NQPCSR
Trigger: TCTGCTACAAGGCTGATTTCAAGGACATGAATTGTT...TGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR TCA 90 bp TTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGTTCTGATGTTGGGATaGGGTCAACAATTCATGTCC +
Preference number: 4 (lower is better)
Translates to: FAVSCSSFKIIYHISSDCVLMLG*GQQFMS
Trigger: GGACATGAATTGTTGACCTCATCCCAACATCAGAAC...ACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR GCA 90 bp GAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATGTTAATCTGGTCAATTaGATAAAGCATGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: EISRSEFLRSHVHHLRSYVNLVN*IKHGLQ
Trigger: CTGGAGGCCATGCTTTATGCAATTGACCAGATTAAC...ATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp AACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATATTCTCTATTAATGCCTaGACGAATGTTAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: NNVGQEREFSQSQKNTRIFSINA*TNVRDC
Trigger: GCAGTCTCTAACATTCGTGCAGGCATTAATAGAGAA...TATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp GAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATTTCGCTCCAGCCCTGTaGATTTCTTTATATGACTGT +
Preference number: 4 (lower is better)
Translates to: EISRSEFLRSHVHHLRSYFAPAL*ISLYDC
Trigger: ACAGTCATATAAAGAAATGCACAGGGCTGGAGCGAA...ATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp TTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTCTTTTTGGATCAGTTTaGTTTGCATGGTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FAVSCSSFKIIYHISSDCLFGSV*FAWWQL
Trigger: CAGCTGCCACCATGCAAAGCAAACTGATCCAAAAAG...ACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp AGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTTTTGGATCAGTTTaGTTTGCATGGTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RSEFLRSHVHHLRSYTTSLFGSV*FAWWQL
Trigger: CAGCTGCCACCATGCAAAGCAAACTGATCCAAAAAG...AGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp ATTTGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCCAATTGCATAAAGCATaGCCTCCAGTCTGTGAATCC +
Preference number: 4 (lower is better)
Translates to: ICHSFIDTKMGFNRSVKFQLHKA*PPVCES
Trigger: GGATTCACAGACTGGAGGCCATGCTTTATGCAATTG...GAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp TTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCTTGGTGAAAATGGGTaGATCTCCATTAGCACACTT +
Preference number: 4 (lower is better)
Translates to: LRSHVHHLRSYTTSLQIVLGENG*ISISTL
Trigger: AAGTGTGCTAATGGAGATCCACCCATTTTCACCAAG...CACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGAATGATCTTGGTGAAAATGGGTaGATCTCCATTAGCACACTT +
Preference number: 4 (lower is better)
Translates to: SYTTSLQIVPFPCFRLNDLGENG*ISISTL
Trigger: AAGTGTGCTAATGGAGATCCACCCATTTTCACCAAG...ATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341617.7
ENST00000358373.7
ENST00000472701.5
CDS-3UTR CCA 90 bp TCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGAGCATCAATTACAAATTaGACCTTTCCTTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: STEISRSEFLRSHVHHLRASITN*TFPSCS
Trigger: TGAACAGGAAGGAAAGGTCCAATTTGTAATTGATGC...TCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp CAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACGCATCAATTACAAATTaGACCTTTCCTTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: QVKQCGTGTGVLTITEKYASITN*TFPSCS
Trigger: TGAACAGGAAGGAAAGGTCCAATTTGTAATTGATGC...GTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGGCAGGGCGTAAGCCATaGAATATACAGCATCAATTA +
Preference number: 4 (lower is better)
Translates to: CSSFKIIYHISSDCAISLAGRKP*NIQHQL
Trigger: TAATTGATGCTGTATATTCCATGGCTTACGCCCTGC...CAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGAATGGTACTCATTCGTaGACAAAGGCCAATGTATCC +
Preference number: 4 (lower is better)
Translates to: CSSFKIIYHISSDCAISLNGTHS*TKANVS
Trigger: GGATACATTGGCCTTTGTCCACGAATGAGTACCATT...CAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp GAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATAATGGTACTCATTCGTaGACAAAGGCCAATGTATCC +
Preference number: 4 (lower is better)
Translates to: EISRSEFLRSHVHHLRSYNGTHS*TKANVS
Trigger: GGATACATTGGCCTTTGTCCACGAATGAGTACCATT...ATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp ATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCTGTGTAAATGGTACTCATTCGTaGACAAAGGCCAATGTATCC +
Preference number: 4 (lower is better)
Translates to: MGFNRSVKFYWLSTDFCVNGTHS*TKANVS
Trigger: GGATACATTGGCCTTTGTCCACGAATGAGTACCATT...TACACAGAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp TCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGAATGATGCTCTTTCCCATCAATaGTACTCATTCGTGGACAAA +
Preference number: 4 (lower is better)
Translates to: SYTTSLQIVPFPCFRLNDALSHQ*YSFVDK
Trigger: TTTGTCCACGAATGAGTACCATTGATGGGAAAGAGC...ATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341617.7
ENST00000358373.7
ENST00000472701.5
CDS-3UTR TCA 90 bp TGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACCATAAACAGTACAAGTaGCCATCAAGAGGATACTGT +
Preference number: 4 (lower is better)
Translates to: CHSFIDTKMGFNRSVKFYHKQYK*PSRGYC
Trigger: ACAGTATCCTCTTGATGGTCACTTGTACTGTTTATG...GTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp GATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCCCTGTTTCAGATTaGATGATTGCTGTAACTGAT +
Preference number: 4 (lower is better)
Translates to: DTKMGFNRSVKFYWLSTDFPVSD*MIAVTD
Trigger: ATCAGTTACAGCAATCATTCAATCTGAAACAGGGAA...ATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp ATTTGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCCAAGTCTCTTCCATGTaGATAACAAATACTCCCACC +
Preference number: 4 (lower is better)
Translates to: ICHSFIDTKMGFNRSVKFQVSSM*ITNTPT
Trigger: GGTGGGAGTATTTGTTATTCACATGGAAGAGACTTG...GAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR GCA 90 bp AGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTGTTAATCTGGTCAATTaGATAAAGCATGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RSEFLRSHVHHLRSYTTSVNLVN*IKHGLQ
Trigger: CTGGAGGCCATGCTTTATGCAATTGACCAGATTAAC...AGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp TCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGTTCGCTCCAGCCCTGTaGATTTCTTTATATGACTGT +
Preference number: 4 (lower is better)
Translates to: SFIDTKMGFNRSVKFYWLFAPAL*ISLYDC
Trigger: ACAGTCATATAAAGAAATGCACAGGGCTGGAGCGAA...CAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR GCA 90 bp TTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGACAGATTTCTTCCCCTaGTCAAATATTCGGTGGATA +
Preference number: 4 (lower is better)
Translates to: LRSHVHHLRSYTTSLQIVTDFFP*SNIRWI
Trigger: TATCCACCGAATATTTGAGCAGGGGAAGAAATCTGT...CACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp GAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATACAGATTTCTTCCCCTaGTCAAATATTCGGTGGATA +
Preference number: 4 (lower is better)
Translates to: EISRSEFLRSHVHHLRSYTDFFP*SNIRWI
Trigger: TATCCACCGAATATTTGAGCAGGGGAAGAAATCTGT...ATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR GCA 90 bp TTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCTTCCCCTaGTCAAATATTCGGTGGATA +
Preference number: 4 (lower is better)
Translates to: FIDTKMGFNRSVKFYWLSTDFFP*SNIRWI
Trigger: TATCCACCGAATATTTGAGCAGGGGAAGAAATCTGT...GCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp TCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGCTTGGTGAAAATGGGTaGATCTCCATTAGCACACTT +
Preference number: 4 (lower is better)
Translates to: SFIDTKMGFNRSVKFYWLLGENG*ISISTL
Trigger: AAGTGTGCTAATGGAGATCCACCCATTTTCACCAAG...CAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp CTTACAAGACTGACTATTGATTTGATTGATTGTAGTCTACGGAGATCTCCAGGAGCATCAATTACAAATTaGACCTTTCCTTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LTRLTIDLIDCSLRRSPGASITN*TFPSCS
Trigger: TGAACAGGAAGGAAAGGTCCAATTTGTAATTGATGC...TCCTGGAGATCTCCGTAGACTACAATCAATCAAATCAATAGTCAGTCTTGTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCGCAGGGCGTAAGCCATaGAATATACAGCATCAATTA +
Preference number: 4 (lower is better)
Translates to: SCSSFKIIYHISSDCAISAGRKP*NIQHQL
Trigger: TAATTGATGCTGTATATTCCATGGCTTACGCCCTGC...GGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCCAGATGACTTACTGTTaGTTTCAAGACTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: FIDTKMGFNRSVKFYWLSQMTYC*FQDSHR
Trigger: TCTGTGAGAGTCTTGAAACCAACAGTAAGTCATCTG...GCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp ATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCTGTGTATCATGTGCTTTTTCCTaGGTGGAATCTATTAGGAAG +
Preference number: 4 (lower is better)
Translates to: MGFNRSVKFYWLSTDFCVSCAFS*VESIRK
Trigger: CTTCCTAATAGATTCCACCCAGGAAAAAGCACATGA...TACACAGAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp ATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCTGTGTAATCCAAGTGAACAAATaGGTGAGAGATCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: MGFNRSVKFYWLSTDFCVIQVNK*VRDQKC
Trigger: ACATTTCTGATCTCTCACTCATTTGTTCACTTGGAT...TACACAGAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR TCA 90 bp AGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCATAAACAGTACAAGTaGCCATCAAGAGGATACTGT +
Preference number: 4 (lower is better)
Translates to: RSEFLRSHVHHLRSYTTSHKQYK*PSRGYC
Trigger: ACAGTATCCTCTTGATGGTCACTTGTACTGTTTATG...AGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR TCA 90 bp TCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAACAATTCATGTCCTTaGAATCAGCCTTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: SFIDTKMGFNRSVKFYWLNNSCP*NQPCSR
Trigger: TCTGCTACAAGGCTGATTTCAAGGACATGAATTGTT...CAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR GCA 90 bp TCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCCAGGAGTGAATTTTTaGGGTCTCATGTTCATCATT +
Preference number: 4 (lower is better)
Translates to: SCSSFKIIYHISSDCAISPGVNF*GLMFII
Trigger: AATGATGAACATGAGACCGCAAAAATTCACTCCTGG...GGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp ATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCTGTGTAGCATCAATTACAAATTaGACCTTTCCTTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: MGFNRSVKFYWLSTDFCVASITN*TFPSCS
Trigger: TGAACAGGAAGGAAAGGTCCAATTTGTAATTGATGC...TACACAGAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp CTTACAAGACTGACTATTGATTTGATTGATTGTAGTCTACGGAGATCTCCAGGAACTCTGTGCTTTTGTTaGTTATTTGATACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LTRLTIDLIDCSLRRSPGTLCFC*LFDTGR
Trigger: TCTTCCAGTATCAAATAACCAACAAAAGCACAGAGT...TCCTGGAGATCTCCGTAGACTACAATCAATCAAATCAATAGTCAGTCTTGTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp GTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCATTGAAAGTCTCTaGGACACCTCTCGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: VHHLRSYTTSLQIVPFPCFIESL*DTSRFN
Trigger: ATTAAAACGAGAGGTGTCCCAGAGACTTTCAATGAA...ACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGAATGATGTAAGTGTTGTTGTCTaGATGTACATCTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SYTTSLQIVPFPCFRLNDVSVVV*MYIFSA
Trigger: AGCAGAAAAGATGTACATCCAGACAACAACACTTAC...ATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341617.7
ENST00000358373.7
ENST00000472701.5
CDS-3UTR GCA 90 bp TGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGCTTATAAGATCAACTTaGCTGGAATGGTGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: CSSFKIIYHISSDCAISLLIRST*LEWCKN
Trigger: ATTTTTGCACCATTCCAGGCAAGTTGATCTTATAAG...CAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGACTCTGTGCTTTTGTTaGTTATTTGATACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LRSHVHHLRSYTTSLQIVTLCFC*LFDTGR
Trigger: TCTTCCAGTATCAAATAACCAACAAAAGCACAGAGT...CACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp ATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCTGTGTAACTCTGTGCTTTTGTTaGTTATTTGATACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: MGFNRSVKFYWLSTDFCVTLCFC*LFDTGR
Trigger: TCTTCCAGTATCAAATAACCAACAAAAGCACAGAGT...TACACAGAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp AGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTTTCATTGAAAGTCTCTaGGACACCTCTCGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: RSEFLRSHVHHLRSYTTSFIESL*DTSRFN
Trigger: ATTAAAACGAGAGGTGTCCCAGAGACTTTCAATGAA...AGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp ATTTGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTTCATTGAAAGTCTCTaGGACACCTCTCGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: ICHSFIDTKMGFNRSVKFFIESL*DTSRFN
Trigger: ATTAAAACGAGAGGTGTCCCAGAGACTTTCAATGAA...GAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp TTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGTAAGTGTTGTTGTCTaGATGTACATCTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FAVSCSSFKIIYHISSDCVSVVV*MYIFSA
Trigger: AGCAGAAAAGATGTACATCCAGACAACAACACTTAC...ACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp TCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGGTAAGTGTTGTTGTCTaGATGTACATCTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SFIDTKMGFNRSVKFYWLVSVVV*MYIFSA
Trigger: AGCAGAAAAGATGTACATCCAGACAACAACACTTAC...CAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp TGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACCCATATTCAGCTTCCTaGTATTTTACCATACAAATC +
Preference number: 4 (lower is better)
Translates to: CHSFIDTKMGFNRSVKFYPYSAS*YFTIQI
Trigger: GATTTGTATGGTAAAATACCAGGAAGCTGAATATGG...GTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472701.5
3UTR CAA 72 bp AAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTaGAGCACAGATTTCTGTGTATTGTTATCATGTGCT +
Preference number: 4 (lower is better)
Translates to: KMGFNRSVKFYW*STDFCVLLSCA
Trigger: AGCACATGATAACAATACACAGAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR GCA 90 bp TCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGCTTATAAGATCAACTTaGCTGGAATGGTGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: SFIDTKMGFNRSVKFYWLLIRST*LEWCKN
Trigger: ATTTTTGCACCATTCCAGGCAAGTTGATCTTATAAG...CAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CCA 90 bp TCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCACTCTGTGCTTTTGTTaGTTATTTGATACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SCSSFKIIYHISSDCAISTLCFC*LFDTGR
Trigger: TCTTCCAGTATCAAATAACCAACAAAAGCACAGAGT...GGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CCA 90 bp ATTTGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTCAGTTAAATTCTACTaGTTGAGCACAGATTTCTGT +
Preference number: 4 (lower is better)
Translates to: ICHSFIDTKMGFNRSVKFSVKFY*LSTDFC
Trigger: ACAGAAATCTGTGCTCAACCAGTAGAATTTAACTGA...GAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCAAAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS CCA 90 bp CGCCGCCGCCGCCGCCGCGTGAGGCGAGCACAGCGGCCGCACTTGTaGCTGATCTCTGGGCTGAGGGGGCTGAGCTGGCCTAGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: RRRRRRVRRAQRPHL*LISGLRGLSWPSRR
Trigger: GCGCCTGCTAGGCCAGCTCAGCCCCCTCAGCCCAGAGATCAGCCACAAGTGCGGCCGCTGTGCTCGCCTCACGCGGCGGCGGCGGCGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS TCA 90 bp CAGCCTTGTAGCAGAATTATTCCCTGCTCCCCGCAGAGGGCGCGGTaGGGAAGCCCGCCGGGGGCCCGCAGCTCCATGTCAGCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: QPCSRIIPCSPQRAR*GSPPGARSSMSAPP
Trigger: CGGCGGCGCTGACATGGAGCTGCGGGCCCCCGGCGGGCTTCCTCACCGCGCCCTCTGCGGGGAGCAGGGAATAATTCTGCTACAAGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000472701.5
CDS GCA 90 bp TTCCATGTGAATAACAAATACTCCCACCGGCGGCCGCGATTGGTCTaGGCCCGGCGCCTCCCGATCCTCCGCCCGCGGCCATTCACCCGG +
Preference number: 5 (lower is better)
Translates to: FHVNNKYSHRRPRLV*ARRLPILRPRPFTR
Trigger: CCGGGTGAATGGCCGCGGGCGGAGGATCGGGAGGCGCCGGGCGCAGACCAATCGCGGCCGCCGGTGGGAGTATTTGTTATTCACATGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS TCA 90 bp CTGAGGGGGCTGAGCTGGCCTAGCAGGCGCCAAGTCTCTTCCATGTaGATAACAAATACTCCCACCGGCGGCCGCGATTGGTCTGCGCCC +
Preference number: 5 (lower is better)
Translates to: LRGLSWPSRRQVSSM*ITNTPTGGRDWSAP
Trigger: GGGCGCAGACCAATCGCGGCCGCCGGTGGGAGTATTTGTTATTCACATGGAAGAGACTTGGCGCCTGCTAGGCCAGCTCAGCCCCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp TCCTCTCCCCTGGCTTACACGGCAGGCTGCAGACAGACGCCGGGTGAGTATGTTCCAGGGCAGAGATCTTaGTGCATATTGTGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: SSPLAYTAGCRQTPGEYVPGQRS*CILCRA
Trigger: CGCCCTGCACAATATGCACAAAGATCTCTGCCCTGG...AACATACTCACCCGGCGTCTGTCTGCAGCCTGCCGTGTAAGCCAGGGGAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS GCA 90 bp AAGCACAGAACAGTGGGAAGGAGCTGGATCCTCGCTGCCTTTGTTTaGAGAGGGACACAACCAGCCAACACACTTCCAGACTTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: KHRTVGRSWILAAFV*RGTQPANTLPDFLQ
Trigger: CTGCAAGAAGTCTGGAAGTGTGTTGGCTGGTTGTGTCCCTCTGCAAACAAAGGCAGCGAGGATCCAGCTCCTTCCCACTGTTCTGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423518.5
CDS GCA 90 bp CTAAGGGTAGAAGCACAGAACAGTGGGAAGGAGCTGGATCCTCGCTaGCTTTGTTTGCAGAGGGACACAACCAGCCAACACACTTCCAGA +
Preference number: 5 (lower is better)
Translates to: LRVEAQNSGKELDPR*LCLQRDTTSQHTSR
Trigger: TCTGGAAGTGTGTTGGCTGGTTGTGTCCCTCTGCAAACAAAGGCAGCGAGGATCCAGCTCCTTCCCACTGTTCTGTGCTTCTACCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423518.5
CDS GCA 90 bp AAGTCTTCCGTGCAGGCAGAAGTGGGTCCCAAGGTTGAGATATGGTaGAAGAGTAGGAGGCACAGGTTCAAGCTGAATTATCTCGAACGC +
Preference number: 5 (lower is better)
Translates to: KSSVQAEVGPKVEIW*KSRRHRFKLNYLER
Trigger: GCGTTCGAGATAATTCAGCTTGAACCTGTGCCTCCTACTCTTGCACCATATCTCAACCTTGGGACCCACTTCTGCCTGCACGGAAGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473254.1
CDS-3UTR CAA 90 bp CAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACGCACAGCGGCCGCACTaGTGGCTGATCTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: QVKQCGTGTGVLTITEKYAQRPH*WLISGL
Trigger: CAGCCCAGAGATCAGCCACAAGTGCGGCCGCTGTGC...GTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339582.7
CDS-3UTR CAA 90 bp ACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCGCACAGCGGCCGCACTaGTGGCTGATCTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: TKMGFNRSVKFYWLSTDFAQRPH*WLISGL
Trigger: CAGCCCAGAGATCAGCCACAAGTGCGGCCGCTGTGC...GAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS TCA 90 bp GTATGGAATGGGCATACTCCTGGCTGTGAGTTCTTTGCATCATTGTaGGGATCCAGTAGAACTTGGCGGTCAAGAGGAAGAAACAAGGGC +
Preference number: 5 (lower is better)
Translates to: VWNGHTPGCEFFASL*GSSRTWRSRGRNKG
Trigger: GCCCTTGTTTCTTCCTCTTGACCGCCAAGTTCTACTGGATCCTCACAATGATGCAAAGAACTCACAGCCAGGAGTATGCCCATTCCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
ENST00000457830.1
ENST00000472701.5
CDS CCA 90 bp TTTAAGTCTTCCGTGCAGGCAGAAGTGGGTCCCAAGGTTGAGATATaGTGCAAGAGTAGGAGGCACAGGTTCAAGCTGAATTATCTCGAA +
Preference number: 5 (lower is better)
Translates to: FKSSVQAEVGPKVEI*CKSRRHRFKLNYLE
Trigger: TTCGAGATAATTCAGCTTGAACCTGTGCCTCCTACTCTTGCACCATATCTCAACCTTGGGACCCACTTCTGCCTGCACGGAAGACTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473254.1
CDS-3UTR CAA 90 bp GGTTTCAAGACTCTCACAGAGTTCACTTTTCACCTCGCCATTTGGTCTGTCATTGCTGTCACCACAGCCTaGAAGCTCCTCTTGCGTTTT +
Preference number: 5 (lower is better)
Translates to: GFKTLTEFTFHLAIWSVIAVTTA*KLLLRF
Trigger: AAAACGCAAGAGGAGCTTCAAGGCTGTGGTGACAGC...AATGACAGACCAAATGGCGAGGTGAAAAGTGAACTCTGTGAGAGTCTTGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS CCA 90 bp AGCACCTATGACGCCAGAAATCTTGTCGGGCTTGGTGAAAATGGGTaGATCTCCATTAGCACACTTCACATCCGAAGCATCTTTCTCTAT +
Preference number: 5 (lower is better)
Translates to: STYDARNLVGLGENG*ISISTLHIRSIFLY
Trigger: ATAGAGAAAGATGCTTCGGATGTGAAGTGTGCTAATGGAGATCCACCCATTTTCACCAAGCCCGACAAGATTTCTGGCGTCATAGGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
ENST00000457830.1
ENST00000472701.5
CDS CCA 90 bp TTTCTTGTATCTCCACCACCAACCCTGTTTTCCAGTTCTGTCAGTTaGCAGGATTTGTATTCAATCGCGGTAGTAGCCCAGACTCTAGTG +
Preference number: 5 (lower is better)
Translates to: FLVSPPPTLFSSSVS*QDLYSIAVVAQTLV
Trigger: CACTAGAGTCTGGGCTACTACCGCGATTGAATACAAATCCTGCCAACTGACAGAACTGGAAAACAGGGTTGGTGGTGGAGATACAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412160.1
CDS-3UTR CAA 90 bp GTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGACACCCAGAGTGATGTaGGAAAGGAGATCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: VLYKLNNVGQEREFSQSQTPRVM*ERRSGS
Trigger: GGACCCTGATCTCCTTTCCAACATCACTCTGGGTGT...CTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp CATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCCCAGGGCAGAGATCTTaGTGCATATTGTGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: HCLIQVKQCGTGTGVLTIPGQRS*CILCRA
Trigger: CGCCCTGCACAATATGCACAAAGATCTCTGCCCTGG...GATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TCCTTTTTGGATCAGTTTGCTTTGCATGGTGGCAGCTGTCACCACAGCCTTGAAGCTCCTCTTGCGTTTTaGAACATTCTGTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: SFLDQFALHGGSCHHSLEAPLAF*NILFWM
Trigger: CATCCAGAACAGAATGTTCAAAAACGCAAGAGGAGC...TTCAAGGCTGTGGTGACAGCTGCCACCATGCAAAGCAAACTGATCCAAAAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR CAA 90 bp TGTAGTCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTGCTGTCACCACAGCCTaGAAGCTCCTCTTGCGTTTT +
Preference number: 5 (lower is better)
Translates to: CSLRRSPGVNFCGLMFIIAVTTA*KLLLRF
Trigger: AAAACGCAAGAGGAGCTTCAAGGCTGTGGTGACAGC...AATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGACTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TTTTTAGCACAACCCAGGGCTTCAATCTGGTCAGCCATTACAAGAAACAGACTCTTGGATCAGTTTGCTTaGCATGGTGGCAGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: FLAQPRASIWSAITRNRLLDQFA*HGGSCH
Trigger: GTGACAGCTGCCACCATGCAAAGCAAACTGATCCAA...GAGTCTGTTTCTTGTAATGGCTGACCAGATTGAAGCCCTGGGTTGTGCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS TCA 90 bp TGTGCTTTTTCCTGGGTGGAATCTATTAGGAAGTGCTCCCGCTCTTaGCCATCGGAAACTCTACAGATGACTTACTGTTGGTTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: CAFSWVESIRKCSRS*PSETLQMTYCWFQD
Trigger: GTCTTGAAACCAACAGTAAGTCATCTGTAGAGTTTCCGATGGTCAAGAGCGGGAGCACTTCCTAATAGATTCCACCCAGGAAAAAGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS CCA 90 bp ATAGTCATGTGCCTGGGGAGTTATTTGGTGCTGATCCAACTACACTaGCTTCCTTTTTGTTTCACCTGCAGCACTCATACATATCACCAC +
Preference number: 5 (lower is better)
Translates to: IVMCLGSYLVLIQLH*LPFCFTCSTHTYHH
Trigger: GTGGTGATATGTATGAGTGCTGCAGGTGAAACAAAAAGGAAGCCAGTGTAGTTGGATCAGCACCAAATAACTCCCCAGGCACATGACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473254.1
CDS-3UTR CAA 90 bp CAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACACACCCAGAGTGATGTaGGAAAGGAGATCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: QVKQCGTGTGVLTITEKYTPRVM*ERRSGS
Trigger: GGACCCTGATCTCCTTTCCAACATCACTCTGGGTGT...GTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp GTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGTTGGATCAGTTTGCTTaGCATGGTGGCAGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: VLYKLNNVGQEREFSQSQLDQFA*HGGSCH
Trigger: GTGACAGCTGCCACCATGCAAAGCAAACTGATCCAA...CTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp CATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCTCACATCTCCAAGCCTaGGGAGTTCCGGGTAAAGTC +
Preference number: 5 (lower is better)
Translates to: HCLIQVKQCGTGTGVLTISHLQA*GVPGKV
Trigger: GACTTTACCCGGAACTCCCAAGGCTTGGAGATGTGA...GATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358373.7
CDS TCA 90 bp CTATTAGGAAGTGCTCCCGCTCTTGACCATCGGAAACTCTACAGATaGCTTACTGTTGGTTTCAAGACTCTCACAGAGTTCACTTTTCAC +
Preference number: 5 (lower is better)
Translates to: LLGSAPALDHRKLYR*LTVGFKTLTEFTFH
Trigger: GTGAAAAGTGAACTCTGTGAGAGTCTTGAAACCAACAGTAAGTCATCTGTAGAGTTTCCGATGGTCAAGAGCGGGAGCACTTCCTAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358373.7
ENST00000472701.5
ENST00000495315.1
CDS TCA 90 bp TGTTGTCTTGGTAGAGGAAGATCTATTAGGAAGTGCTCCCGCTCTTaGCCATCGGAAACTCTACAGATGACTTACTGTTGGTTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: CCLGRGRSIRKCSRS*PSETLQMTYCWFQD
Trigger: GTCTTGAAACCAACAGTAAGTCATCTGTAGAGTTTCCGATGGTCAAGAGCGGGAGCACTTCCTAATAGATCTTCCTCTACCAAGACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358373.7
ENST00000495315.1
CDS-3UTR CAA 90 bp TCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGAATGATCCAGGGCAGAGATCTTaGTGCATATTGTGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: SYTTSLQIVPFPCFRLNDPGQRS*CILCRA
Trigger: CGCCCTGCACAATATGCACAAAGATCTCTGCCCTGG...ATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341617.7
ENST00000358373.7
ENST00000472701.5
CDS-3UTR CAA 90 bp ACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACATTCGGTGGATACGGTTaGTTTTGGTCAGAAGGGCTG +
Preference number: 5 (lower is better)
Translates to: THCLIQVKQCGTGTGVLTFGGYG*FWSEGL
Trigger: CAGCCCTTCTGACCAAAACAAACCGTATCCACCGAA...TGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp CAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAACGCTGGACTAATGAACTaGGGCGCTGTGACAGATTTC +
Preference number: 5 (lower is better)
Translates to: QCGTGTGVLTITEKYKNNAGLMN*GAVTDF
Trigger: GAAATCTGTCACAGCGCCCAAGTTCATTAGTCCAGC...GTTATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp ACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAGCTGGACTAATGAACTaGGGCGCTGTGACAGATTTC +
Preference number: 5 (lower is better)
Translates to: THCLIQVKQCGTGTGVLTAGLMN*GAVTDF
Trigger: GAAATCTGTCACAGCGCCCAAGTTCATTAGTCCAGC...TGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp CATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCGCTGGACTAATGAACTaGGGCGCTGTGACAGATTTC +
Preference number: 5 (lower is better)
Translates to: HCLIQVKQCGTGTGVLTIAGLMN*GAVTDF
Trigger: GAAATCTGTCACAGCGCCCAAGTTCATTAGTCCAGC...GATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp CATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCTCGCCGACTAAACTTTaGGGGGATCACATCTCCAAG +
Preference number: 5 (lower is better)
Translates to: HCLIQVKQCGTGTGVLTISPTKL*GDHISK
Trigger: CTTGGAGATGTGATCCCCCAAAAGTTTAGTCGGCGA...GATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358373.7
CDS-3UTR CAA 90 bp CTTACAAGACTGACTATTGATTTGATTGATTGTAGTCTACGGAGATCTCCAGGAGAAGTGCTCCCGCTCTaGACCATCGGAAACTCTACA +
Preference number: 5 (lower is better)
Translates to: LTRLTIDLIDCSLRRSPGEVLPL*TIGNST
Trigger: TGTAGAGTTTCCGATGGTCAAGAGCGGGAGCACTTC...TCCTGGAGATCTCCGTAGACTACAATCAATCAAATCAATAGTCAGTCTTGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358373.7
CDS-3UTR CAA 90 bp TGTAGTCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTAGGAGATCAGGGTCCTaGTTAATCTGGTCAATTGCA +
Preference number: 5 (lower is better)
Translates to: CSLRRSPGVNFCGLMFIIRRSGS*LIWSIA
Trigger: TGCAATTGACCAGATTAACAAGGACCCTGATCTCCT...AATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGAATGATACACCCAGAGTGATGTaGGAAAGGAGATCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: SYTTSLQIVPFPCFRLNDTPRVM*ERRSGS
Trigger: GGACCCTGATCTCCTTTCCAACATCACTCTGGGTGT...ATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341617.7
ENST00000358373.7
ENST00000472701.5
CDS-3UTR CAA 90 bp CAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAACGAAATCTTGTCGGGCTaGGTGAAAATGGGTGGATCT +
Preference number: 5 (lower is better)
Translates to: QCGTGTGVLTITEKYKNNEILSG*VKMGGS
Trigger: AGATCCACCCATTTTCACCAAGCCCGACAAGATTTC...GTTATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTCCAGGGCAGAGATCTTaGTGCATATTGTGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: FAVSCSSFKIIYHISSDCPGQRS*CILCRA
Trigger: CGCCCTGCACAATATGCACAAAGATCTCTGCCCTGG...ACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp CAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACCAGTGGCCGATGACTTaGTACTCTGTGCTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: QVKQCGTGTGVLTITEKYQWPMT*YSVLLL
Trigger: CAACAAAAGCACAGAGTACAAAGTCATCGGCCACTG...GTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp ACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAGAATGCCACTCCAATTaGATGATGGGGATAAGCTGG +
Preference number: 5 (lower is better)
Translates to: THCLIQVKQCGTGTGVLTECHSN*MMGISW
Trigger: CCAGCTTATCCCCATCATCAAATTGGAGTGGCATTC...TGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp AAACAGACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTTTCGGTGGATACGGTTaGTTTTGGTCAGAAGGGCTG +
Preference number: 5 (lower is better)
Translates to: KQTHCLIQVKQCGTGTGVFGGYG*FWSEGL
Trigger: CAGCCCTTCTGACCAAAACAAACCGTATCCACCGAA...AACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGTCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGACCTTTTTGGATCAGTTaGCTTTGCATGGTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: STEISRSEFLRSHVHHLRPFWIS*LCMVAA
Trigger: AGCTGCCACCATGCAAAGCAAACTGATCCAAAAAGG...TCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp CAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACCCTTTTTGGATCAGTTaGCTTTGCATGGTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: QVKQCGTGTGVLTITEKYPFWIS*LCMVAA
Trigger: AGCTGCCACCATGCAAAGCAAACTGATCCAAAAAGG...GTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp GTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGTTGGTAGAGGAAGTGTaGGTTTCAAGACTCTCACAG +
Preference number: 5 (lower is better)
Translates to: VLYKLNNVGQEREFSQSQLVEEV*VSRLSQ
Trigger: CTGTGAGAGTCTTGAAACCAACACTTCCTCTACCAA...CTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000341617.7
CDS-3UTR CAA 90 bp GTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGCCACATCTCTTCAGATaGTGCCATTTCCCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: VLYKLNNVGQEREFSQSQPHLFR*CHFPVS
Trigger: TGAAACAGGGAAATGGCACAATCTGAAGAGATGTGG...CTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TGTAGTCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTACCCAAAGTTTATTCTaGCCACAGAAGAAAGGGCAC +
Preference number: 5 (lower is better)
Translates to: CSLRRSPGVNFCGLMFIITQSLF*PQKKGH
Trigger: GTGCCCTTTCTTCTGTGGCAAGAATAAACTTTGGGT...AATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACGAAGTGCTCCCGCTCTaGACCATCGGAAACTCTACA +
Preference number: 5 (lower is better)
Translates to: CHSFIDTKMGFNRSVKFYEVLPL*TIGNST
Trigger: TGTAGAGTTTCCGATGGTCAAGAGCGGGAGCACTTC...GTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS TCA 90 bp GCATGTCTTCCACTTTTAGATGAAGCTGATTGGTCCAGTGGCCGATaGCTTTGTACTCTGTGCTTTTGTTGGTTATTTGATACTGGAAGA +
Preference number: 5 (lower is better)
Translates to: ACLPLLDEADWSSGR*LCTLCFCWLFDTGR
Trigger: TCTTCCAGTATCAAATAACCAACAAAAGCACAGAGTACAAAGTCATCGGCCACTGGACCAATCAGCTTCATCTAAAAGTGGAAGACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
ENST00000472701.5
CDS-3UTR CAA 90 bp CTTACAAGACTGACTATTGATTTGATTGATTGTAGTCTACGGAGATCTCCAGGACTGGCTGTGAGTTCTTaGCATCATTGTGAGGATCCA +
Preference number: 5 (lower is better)
Translates to: LTRLTIDLIDCSLRRSPGLAVSS*HHCEDP
Trigger: TGGATCCTCACAATGATGCAAAGAACTCACAGCCAG...TCCTGGAGATCTCCGTAGACTACAATCAATCAAATCAATAGTCAGTCTTGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp GATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATCTGGCTGTGAGTTCTTaGCATCATTGTGAGGATCCA +
Preference number: 5 (lower is better)
Translates to: DTKMGFNRSVKFYWLSTDLAVSS*HHCEDP
Trigger: TGGATCCTCACAATGATGCAAAGAACTCACAGCCAG...ATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp AGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTACACCCAGAGTGATGTaGGAAAGGAGATCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: RSEFLRSHVHHLRSYTTSTPRVM*ERRSGS
Trigger: GGACCCTGATCTCCTTTCCAACATCACTCTGGGTGT...AGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp CTTACAAGACTGACTATTGATTTGATTGATTGTAGTCTACGGAGATCTCCAGGAGAAATCTTGTCGGGCTaGGTGAAAATGGGTGGATCT +
Preference number: 5 (lower is better)
Translates to: LTRLTIDLIDCSLRRSPGEILSG*VKMGGS
Trigger: AGATCCACCCATTTTCACCAAGCCCGACAAGATTTC...TCCTGGAGATCTCCGTAGACTACAATCAATCAAATCAATAGTCAGTCTTGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp AACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATACAGTGGCCGATGACTTaGTACTCTGTGCTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: NNVGQEREFSQSQKNTRIQWPMT*YSVLLL
Trigger: CAACAAAAGCACAGAGTACAAAGTCATCGGCCACTG...TATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp GATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATCAGTGGCCGATGACTTaGTACTCTGTGCTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: DTKMGFNRSVKFYWLSTDQWPMT*YSVLLL
Trigger: CAACAAAAGCACAGAGTACAAAGTCATCGGCCACTG...ATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp ACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCGAATGCCACTCCAATTaGATGATGGGGATAAGCTGG +
Preference number: 5 (lower is better)
Translates to: TKMGFNRSVKFYWLSTDFECHSN*MMGISW
Trigger: CCAGCTTATCCCCATCATCAAATTGGAGTGGCATTC...GAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp TTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGTTCGGTGGATACGGTTaGTTTTGGTCAGAAGGGCTG +
Preference number: 5 (lower is better)
Translates to: LRSYTTSLQIVPFPCFRLFGGYG*FWSEGL
Trigger: CAGCCCTTCTGACCAAAACAAACCGTATCCACCGAA...CAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACGCTGGACTAATGAACTaGGGCGCTGTGACAGATTTC +
Preference number: 5 (lower is better)
Translates to: CHSFIDTKMGFNRSVKFYAGLMN*GAVTDF
Trigger: GAAATCTGTCACAGCGCCCAAGTTCATTAGTCCAGC...GTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp CAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAACATAGGTTTGGCTTCATaGAAAGTCTCTGGGACACCT +
Preference number: 5 (lower is better)
Translates to: QCGTGTGVLTITEKYKNNIGLAS*KVSGTP
Trigger: AGGTGTCCCAGAGACTTTCAATGAAGCCAAACCTAT...GTTATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCGCTGTCACCACAGCCTaGAAGCTCCTCTTGCGTTTT +
Preference number: 5 (lower is better)
Translates to: SCSSFKIIYHISSDCAISAVTTA*KLLLRF
Trigger: AAAACGCAAGAGGAGCTTCAAGGCTGTGGTGACAGC...GGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp ATTTGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCGCTGTCACCACAGCCTaGAAGCTCCTCTTGCGTTTT +
Preference number: 5 (lower is better)
Translates to: ICHSFIDTKMGFNRSVKFAVTTA*KLLLRF
Trigger: AAAACGCAAGAGGAGCTTCAAGGCTGTGGTGACAGC...GAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp TCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGAATGATTTGGATCAGTTTGCTTaGCATGGTGGCAGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: SYTTSLQIVPFPCFRLNDLDQFA*HGGSCH
Trigger: GTGACAGCTGCCACCATGCAAAGCAAACTGATCCAA...ATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341617.7
ENST00000358373.7
ENST00000472701.5
CDS-3UTR CAA 90 bp ACAGTACAAGTGACCATCAAGAGGATACTGTATCCAAGTGAACAAATGAGTGAGCCACATCTCTTCAGATaGTGCCATTTCCCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: TVQVTIKRILYPSEQMSEPHLFR*CHFPVS
Trigger: TGAAACAGGGAAATGGCACAATCTGAAGAGATGTGG...CTCACTCATTTGTTCACTTGGATACAGTATCCTCTTGATGGTCACTTGTACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR CAA 90 bp GTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGTCCAGGAGTGAATTTTaGCGGTCTCATGTTCATCAT +
Preference number: 5 (lower is better)
Translates to: VLYKLNNVGQEREFSQSQSRSEF*RSHVHH
Trigger: ATGATGAACATGAGACCGCAAAAATTCACTCCTGGA...CTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp CGTCGGAAGGAGCATATGATTGTATCTGGTGCTGCAATCATTAAAAACGTGATTTTCACTCCCCGTTTATaGATACTTTTGGCTCATGGC +
Preference number: 5 (lower is better)
Translates to: RRKEHMIVSGAAIIKNVIFTPRL*ILLAHG
Trigger: GCCATGAGCCAAAAGTATCAATAAACGGGGAGTGAA...AATCACGTTTTTAATGATTGCAGCACCAGATACAATCATATGCTCCTTCCGACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341617.7
CDS-3UTR CAA 90 bp CAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACTTCACTCCCCGTTTATaGATACTTTTGGCTCATGGC +
Preference number: 5 (lower is better)
Translates to: QVKQCGTGTGVLTITEKYFTPRL*ILLAHG
Trigger: GCCATGAGCCAAAAGTATCAATAAACGGGGAGTGAA...GTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp AACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATATCTCCACAGGTGGTATaGCAATCCAAGACCCAAAGT +
Preference number: 5 (lower is better)
Translates to: NNVGQEREFSQSQKNTRISPQVV*QSKTQS
Trigger: ACTTTGGGTCTTGGATTGCAATACCACCTGTGGAGA...TATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR CAA 90 bp ACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCTCTCCACAGGTGGTATaGCAATCCAAGACCCAAAGT +
Preference number: 5 (lower is better)
Translates to: TKMGFNRSVKFYWLSTDFSPQVV*QSKTQS
Trigger: ACTTTGGGTCTTGGATTGCAATACCACCTGTGGAGA...GAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS TCA 90 bp TACAGCATCAATTACAAATTGGACCTTTCCTTCCTGTTCATAAGATaGATCCCGAGCAATTCGCTCCAGCCCTGTGCATTTCTTTATATG +
Preference number: 5 (lower is better)
Translates to: YSINYKLDLSFLFIR*IPSNSLQPCAFLYM
Trigger: CATATAAAGAAATGCACAGGGCTGGAGCGAATTGCTCGGGATTCATCTTATGAACAGGAAGGAAAGGTCCAATTTGTAATTGATGCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
ENST00000448250.6
ENST00000472701.5
ENST00000480995.5
CDS-3UTR CAA 90 bp GAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATCTGGCTGTGAGTTCTTaGCATCATTGTGAGGATCCA +
Preference number: 5 (lower is better)
Translates to: EISRSEFLRSHVHHLRSYLAVSS*HHCEDP
Trigger: TGGATCCTCACAATGATGCAAAGAACTCACAGCCAG...ATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGCTGGCTGTGAGTTCTTaGCATCATTGTGAGGATCCA +
Preference number: 5 (lower is better)
Translates to: LRSYTTSLQIVPFPCFRLLAVSS*HHCEDP
Trigger: TGGATCCTCACAATGATGCAAAGAACTCACAGCCAG...CAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGAATGATGAAATCTTGTCGGGCTaGGTGAAAATGGGTGGATCT +
Preference number: 5 (lower is better)
Translates to: SYTTSLQIVPFPCFRLNDEILSG*VKMGGS
Trigger: AGATCCACCCATTTTCACCAAGCCCGACAAGATTTC...ATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341617.7
ENST00000358373.7
ENST00000472701.5
CDS-3UTR CAA 90 bp TTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCAGTGGCCGATGACTTaGTACTCTGTGCTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: LRSHVHHLRSYTTSLQIVQWPMT*YSVLLL
Trigger: CAACAAAAGCACAGAGTACAAAGTCATCGGCCACTG...CACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGGAATGCCACTCCAATTaGATGATGGGGATAAGCTGG +
Preference number: 5 (lower is better)
Translates to: LRSHVHHLRSYTTSLQIVECHSN*MMGISW
Trigger: CCAGCTTATCCCCATCATCAAATTGGAGTGGCATTC...CACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGTTCGGTGGATACGGTTaGTTTTGGTCAGAAGGGCTG +
Preference number: 5 (lower is better)
Translates to: SFIDTKMGFNRSVKFYWLFGGYG*FWSEGL
Trigger: CAGCCCTTCTGACCAAAACAAACCGTATCCACCGAA...CAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp CTTACAAGACTGACTATTGATTTGATTGATTGTAGTCTACGGAGATCTCCAGGAGCTCCTCTTGCGTTTTaGAACATTCTGTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: LTRLTIDLIDCSLRRSPGAPLAF*NILFWM
Trigger: CATCCAGAACAGAATGTTCAAAAACGCAAGAGGAGC...TCCTGGAGATCTCCGTAGACTACAATCAATCAAATCAATAGTCAGTCTTGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp ACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCGCTCCTCTTGCGTTTTaGAACATTCTGTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: TKMGFNRSVKFYWLSTDFAPLAF*NILFWM
Trigger: CATCCAGAACAGAATGTTCAAAAACGCAAGAGGAGC...GAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp TCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCTTGGATCAGTTTGCTTaGCATGGTGGCAGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: SCSSFKIIYHISSDCAISLDQFA*HGGSCH
Trigger: GTGACAGCTGCCACCATGCAAAGCAAACTGATCCAA...GGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCTTTTTGGATCAGTTaGCTTTGCATGGTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: LRSHVHHLRSYTTSLQIVPFWIS*LCMVAA
Trigger: AGCTGCCACCATGCAAAGCAAACTGATCCAAAAAGG...CACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACCCTTTTTGGATCAGTTaGCTTTGCATGGTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: CHSFIDTKMGFNRSVKFYPFWIS*LCMVAA
Trigger: AGCTGCCACCATGCAAAGCAAACTGATCCAAAAAGG...GTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp TGTAGTCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTCTGATATATGTTGTCTaGGTAGAGGAAGTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: CSLRRSPGVNFCGLMFIILIYVV*VEEVLV
Trigger: AACCAACACTTCCTCTACCAAGACAACATATATCAG...AATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGACTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000341617.7
CDS-3UTR CAA 90 bp AAACAGACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCCACATCTCTTCAGATaGTGCCATTTCCCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: KQTHCLIQVKQCGTGTGVPHLFR*CHFPVS
Trigger: TGAAACAGGGAAATGGCACAATCTGAAGAGATGTGG...AACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGTCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp AACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATATTCACTCCCCGTTTATaGATACTTTTGGCTCATGGC +
Preference number: 5 (lower is better)
Translates to: NNVGQEREFSQSQKNTRIFTPRL*ILLAHG
Trigger: GCCATGAGCCAAAAGTATCAATAAACGGGGAGTGAA...TATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp CTTACAAGACTGACTATTGATTTGATTGATTGTAGTCTACGGAGATCTCCAGGAACCCAAAGTTTATTCTaGCCACAGAAGAAAGGGCAC +
Preference number: 5 (lower is better)
Translates to: LTRLTIDLIDCSLRRSPGTQSLF*PQKKGH
Trigger: GTGCCCTTTCTTCTGTGGCAAGAATAAACTTTGGGT...TCCTGGAGATCTCCGTAGACTACAATCAATCAAATCAATAGTCAGTCTTGTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR CAA 90 bp GATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATACCCAAAGTTTATTCTaGCCACAGAAGAAAGGGCAC +
Preference number: 5 (lower is better)
Translates to: DTKMGFNRSVKFYWLSTDTQSLF*PQKKGH
Trigger: GTGCCCTTTCTTCTGTGGCAAGAATAAACTTTGGGT...ATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp GTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTCTCCACAGGTGGTATaGCAATCCAAGACCCAAAGT +
Preference number: 5 (lower is better)
Translates to: VHHLRSYTTSLQIVPFPCSPQVV*QSKTQS
Trigger: ACTTTGGGTCTTGGATTGCAATACCACCTGTGGAGA...ACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGGAAATCTTGTCGGGCTaGGTGAAAATGGGTGGATCT +
Preference number: 5 (lower is better)
Translates to: SFIDTKMGFNRSVKFYWLEILSG*VKMGGS
Trigger: AGATCCACCCATTTTCACCAAGCCCGACAAGATTTC...CAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp CTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAGCATCAATTACAAATaGGACCTTTCCTTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: LIQVKQCGTGTGVLTITESINYK*DLSFLF
Trigger: GAACAGGAAGGAAAGGTCCAATTTGTAATTGATGCT...TTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGATAGGTTTGGCTTCATaGAAAGTCTCTGGGACACCT +
Preference number: 5 (lower is better)
Translates to: LRSYTTSLQIVPFPCFRLIGLAS*KVSGTP
Trigger: AGGTGTCCCAGAGACTTTCAATGAAGCCAAACCTAT...CAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGATAGGTTTGGCTTCATaGAAAGTCTCTGGGACACCT +
Preference number: 5 (lower is better)
Translates to: CSSFKIIYHISSDCAISLIGLAS*KVSGTP
Trigger: AGGTGTCCCAGAGACTTTCAATGAAGCCAAACCTAT...CAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACATAGGTTTGGCTTCATaGAAAGTCTCTGGGACACCT +
Preference number: 5 (lower is better)
Translates to: CHSFIDTKMGFNRSVKFYIGLAS*KVSGTP
Trigger: AGGTGTCCCAGAGACTTTCAATGAAGCCAAACCTAT...GTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp CATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCTTTTCACCTCGCCATTaGGTCTGTCATTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: HCLIQVKQCGTGTGVLTIFSPRH*VCHFLF
Trigger: AAAAAGGAAATGACAGACCAAATGGCGAGGTGAAAA...GATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCCCACATCTCTTCAGATaGTGCCATTTCCCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: FIDTKMGFNRSVKFYWLSPHLFR*CHFPVS
Trigger: TGAAACAGGGAAATGGCACAATCTGAAGAGATGTGG...GCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp TGTAGTCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTAGACTGACTATTGATTaGATTGATTGTAGTCTACGG +
Preference number: 5 (lower is better)
Translates to: CSLRRSPGVNFCGLMFIIRLTID*IDCSLR
Trigger: CCGTAGACTACAATCAATCAAATCAATAGTCAGTCT...AATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGACTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TCTACGGAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGAGGATGCATAGCTGATTaGAGGTATCTTAAAAAGTCT +
Preference number: 5 (lower is better)
Translates to: STEISRSEFLRSHVHHLRGCIAD*RYLKKS
Trigger: AGACTTTTTAAGATACCTCAAATCAGCTATGCATCC...TCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTCCGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp CATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCGGATGCATAGCTGATTaGAGGTATCTTAAAAAGTCT +
Preference number: 5 (lower is better)
Translates to: HCLIQVKQCGTGTGVLTIGCIAD*RYLKKS
Trigger: AGACTTTTTAAGATACCTCAAATCAGCTATGCATCC...GATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp AAGTTAAACAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGCATCAATTACAAATaGGACCTTTCCTTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: KLNNVGQEREFSQSQKNTSINYK*DLSFLF
Trigger: GAACAGGAAGGAAAGGTCCAATTTGTAATTGATGCT...TGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTGTTTAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp CAATGTGGGACAGGAACGGGAGTTCTCACAATCACAGAAAAATACAAGAATAACGTAAATCCAATAGGTTaGGCTTCATTGAAAGTCTCT +
Preference number: 5 (lower is better)
Translates to: QCGTGTGVLTITEKYKNNVNPIG*ASLKVS
Trigger: AGAGACTTTCAATGAAGCCAAACCTATTGGATTTAC...GTTATTCTTGTATTTTTCTGTGATTGTGAGAACTCCCGTTCCTGTCCCACATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCTCCTCTTGCGTTTTaGAACATTCTGTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: FAVSCSSFKIIYHISSDCAPLAF*NILFWM
Trigger: CATCCAGAACAGAATGTTCAAAAACGCAAGAGGAGC...ACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp AAACAGACTCATTGTCTTATACAAGTTAAACAATGTGGGACAGGAACGGGAGTTTTTTCACCTCGCCATTaGGTCTGTCATTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: KQTHCLIQVKQCGTGTGVFSPRH*VCHFLF
Trigger: AAAAAGGAAATGACAGACCAAATGGCGAGGTGAAAA...AACTCCCGTTCCTGTCCCACATTGTTTAACTTGTATAAGACAATGAGTCTGTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp ACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCTTTTCACCTCGCCATTaGGTCTGTCATTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: TKMGFNRSVKFYWLSTDFFSPRH*VCHFLF
Trigger: AAAAAGGAAATGACAGACCAAATGGCGAGGTGAAAA...GAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp TCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCTTGGTAGAGGAAGTGTaGGTTTCAAGACTCTCACAG +
Preference number: 5 (lower is better)
Translates to: SCSSFKIIYHISSDCAISLVEEV*VSRLSQ
Trigger: CTGTGAGAGTCTTGAAACCAACACTTCCTCTACCAA...GGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000341617.7
CDS-3UTR CAA 90 bp TTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGTCCAGGAGTGAATTTTaGCGGTCTCATGTTCATCAT +
Preference number: 5 (lower is better)
Translates to: LRSHVHHLRSYTTSLQIVSRSEF*RSHVHH
Trigger: ATGATGAACATGAGACCGCAAAAATTCACTCCTGGA...CACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp ACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCCCTTATAAGATCAACTaGCCTGGAATGGTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: TKMGFNRSVKFYWLSTDFPYKIN*PGMVQK
Trigger: TTTTTGCACCATTCCAGGCAAGTTGATCTTATAAGG...GAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp TCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGTTTCAGATTGAATGATACAGATGACTTACTGTaGGTTTCAAGACTCTCACAG +
Preference number: 5 (lower is better)
Translates to: SYTTSLQIVPFPCFRLNDTDDLL*VSRLSQ
Trigger: CTGTGAGAGTCTTGAAACCAACAGTAAGTCATCTGT...ATCATTCAATCTGAAACAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358373.7
ENST00000472701.5
CDS-3UTR CAA 90 bp GAGATCTCCAGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATAGCATCAATTACAAATaGGACCTTTCCTTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: EISRSEFLRSHVHHLRSYSINYK*DLSFLF
Trigger: GAACAGGAAGGAAAGGTCCAATTTGTAATTGATGCT...ATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCTGGAGATCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp CTTACAAGACTGACTATTGATTTGATTGATTGTAGTCTACGGAGATCTCCAGGAGTAAATCCAATAGGTTaGGCTTCATTGAAAGTCTCT +
Preference number: 5 (lower is better)
Translates to: LTRLTIDLIDCSLRRSPGVNPIG*ASLKVS
Trigger: AGAGACTTTCAATGAAGCCAAACCTATTGGATTTAC...TCCTGGAGATCTCCGTAGACTACAATCAATCAAATCAATAGTCAGTCTTGTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp ATTTGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCACAGATGACTTACTGTaGGTTTCAAGACTCTCACAG +
Preference number: 5 (lower is better)
Translates to: ICHSFIDTKMGFNRSVKFTDDLL*VSRLSQ
Trigger: CTGTGAGAGTCTTGAAACCAACAGTAAGTCATCTGT...GAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp ATTTGCCACTCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCAGCATCAATTACAAATaGGACCTTTCCTTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: ICHSFIDTKMGFNRSVKFSINYK*DLSFLF
Trigger: GAACAGGAAGGAAAGGTCCAATTTGTAATTGATGCT...GAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGAGTGGCAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp TGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGGTAAATCCAATAGGTTaGGCTTCATTGAAAGTCTCT +
Preference number: 5 (lower is better)
Translates to: CSSFKIIYHISSDCAISLVNPIG*ASLKVS
Trigger: AGAGACTTTCAATGAAGCCAAACCTATTGGATTTAC...CAGGGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp ATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCTGTGTAGTAAATCCAATAGGTTaGGCTTCATTGAAAGTCTCT +
Preference number: 5 (lower is better)
Translates to: MGFNRSVKFYWLSTDFCVVNPIG*ASLKVS
Trigger: AGAGACTTTCAATGAAGCCAAACCTATTGGATTTAC...TACACAGAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATTGAAGCCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS-3UTR CAA 90 bp AGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTTTTTCACCTCGCCATTaGGTCTGTCATTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: RSEFLRSHVHHLRSYTTSFSPRH*VCHFLF
Trigger: AAAAAGGAAATGACAGACCAAATGGCGAGGTGAAAA...AGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCTGATATATGTTGTCTaGGTAGAGGAAGTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: SCSSFKIIYHISSDCAISLIYVV*VEEVLV
Trigger: AACCAACACTTCCTCTACCAAGACAACATATATCAG...GGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000341617.7
CDS-3UTR CAA 90 bp TTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGAGACTGACTATTGATTaGATTGATTGTAGTCTACGG +
Preference number: 5 (lower is better)
Translates to: LRSHVHHLRSYTTSLQIVRLTID*IDCSLR
Trigger: CCGTAGACTACAATCAATCAAATCAATAGTCAGTCT...CACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp AGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTCCTTATAAGATCAACTaGCCTGGAATGGTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: RSEFLRSHVHHLRSYTTSPYKIN*PGMVQK
Trigger: TTTTTGCACCATTCCAGGCAAGTTGATCTTATAAGG...AGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TCATGTTCATCATTTAAGATCATATACCACATCTCTTCAGATTGTGCCATTTCCCCTTATAAGATCAACTaGCCTGGAATGGTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: SCSSFKIIYHISSDCAISPYKIN*PGMVQK
Trigger: TTTTTGCACCATTCCAGGCAAGTTGATCTTATAAGG...GGAAATGGCACAATCTGAAGAGATGTGGTATATGATCTTAAATGATGAACATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339582.7
ENST00000358373.7
CDS-3UTR CAA 90 bp AGGAGTGAATTTTTGCGGTCTCATGTTCATCATTTAAGATCATATACCACATCTGGATGCATAGCTGATTaGAGGTATCTTAAAAAGTCT +
Preference number: 5 (lower is better)
Translates to: RSEFLRSHVHHLRSYTTSGCIAD*RYLKKS
Trigger: AGACTTTTTAAGATACCTCAAATCAGCTATGCATCC...AGATGTGGTATATGATCTTAAATGATGAACATGAGACCGCAAAAATTCACTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
CDS-3UTR CAA 90 bp TCTTTCATAGATACCAAGATGGGCTTCAATAGATCAGTTAAATTCTACTGGTTGGGATGCATAGCTGATTaGAGGTATCTTAAAAAGTCT +
Preference number: 5 (lower is better)
Translates to: SFIDTKMGFNRSVKFYWLGCIAD*RYLKKS
Trigger: AGACTTTTTAAGATACCTCAAATCAGCTATGCATCC...CAACCAGTAGAATTTAACTGATCTATTGAAGCCCATCTTGGTATCTATGAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS CAA 90 bp CGCCGCCGCCGCCGCCGCCGCGTGAGGCGAGCACAGCGGCCGCACTaGTGGCTGATCTCTGGGCTGAGGGGGCTGAGCTGGCCTAGCAGG +
Preference number: 6 (lower is better)
Translates to: RRRRRRRVRRAQRPH*WLISGLRGLSWPSR
Trigger: CCTGCTAGGCCAGCTCAGCCCCCTCAGCCCAGAGATCAGCCACAAGTGCGGCCGCTGTGCTCGCCTCACGCGGCGGCGGCGGCGGCGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS CAA 72 bp CATGTGAATAACAAATACTCCCACCGGCGGCCGCGATaGGTCTGCGCCCGGCGCCTCCCGATCCTCCGCCCG +
Preference number: 6 (lower is better)
Translates to: HVNNKYSHRRPR*VCARRLPILRP
Trigger: CGGGCGGAGGATCGGGAGGCGCCGGGCGCAGACCAATCGCGGCCGCCGGTGGGAGTATTTGTTATTCACATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS CAA 90 bp AGTCTCTTCCATGTGAATAACAAATACTCCCACCGGCGGCCGCGATaGGTCTGCGCCCGGCGCCTCCCGATCCTCCGCCCGCGGCCATTC +
Preference number: 6 (lower is better)
Translates to: SLFHVNNKYSHRRPR*VCARRLPILRPRPF
Trigger: GAATGGCCGCGGGCGGAGGATCGGGAGGCGCCGGGCGCAGACCAATCGCGGCCGCCGGTGGGAGTATTTGTTATTCACATGGAAGAGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS TCA 72 bp CTGAGCTGGCCTAGCAGGCGCCAAGTCTCTTCCATGTaGATAACAAATACTCCCACCGGCGGCCGCGATTGG +
Preference number: 6 (lower is better)
Translates to: LSWPSRRQVSSM*ITNTPTGGRDW
Trigger: CCAATCGCGGCCGCCGGTGGGAGTATTTGTTATTCACATGGAAGAGACTTGGCGCCTGCTAGGCCAGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS CAA 90 bp CCCCCTTCCCGTCACCCTTCAGTCTCCCATTCGCCGACTAAACTTTaGGGGGATCACATCTCCAAGCCTTGGGAGTTCCGGGTAAAGTCT +
Preference number: 6 (lower is better)
Translates to: PPSRHPSVSHSPTKL*GDHISKPWEFRVKS
Trigger: AGACTTTACCCGGAACTCCCAAGGCTTGGAGATGTGATCCCCCAAAAGTTTAGTCGGCGAATGGGAGACTGAAGGGTGACGGGAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358373.7
CDS GCA 72 bp ACAGTGGGAAGGAGCTGGATCCTCGCTGCCTTTGTTTaGAGAGGGACACAACCAGCCAACACACTTCCAGAC +
Preference number: 6 (lower is better)
Translates to: TVGRSWILAAFV*RGTQPANTLPD
Trigger: GTCTGGAAGTGTGTTGGCTGGTTGTGTCCCTCTGCAAACAAAGGCAGCGAGGATCCAGCTCCTTCCCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423518.5
CDS CCA 72 bp GAGGCTGCACCTTCTGGAGGCTACCATCAGGGCCCATaGGGAAAAGGCTCTGTGGGCATTAGCAAGTTTTCT +
Preference number: 6 (lower is better)
Translates to: EAAPSGGYHQGP*GKGSVGISKFS
Trigger: AGAAAACTTGCTAATGCCCACAGAGCCTTTTCCCCATGGGCCCTGATGGTAGCCTCCAGAAGGTGCAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339582.7
ENST00000358373.7
ENST00000412160.1
ENST00000457830.1
ENST00000472701.5
CDS CCA 72 bp GTCACCCTTCAGTCTCCCATTCGCCGACTAAACTTTTaGGGGATCACATCTCCAAGCCTTGGGAGTTCCGGG +
Preference number: 6 (lower is better)
Translates to: VTLQSPIRRLNF*GITSPSLGSSG
Trigger: CCCGGAACTCCCAAGGCTTGGAGATGTGATCCCCCAAAAGTTTAGTCGGCGAATGGGAGACTGAAGGGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358373.7
CDS CAA 72 bp CGTCACCCTTCAGTCTCCCATTCGCCGACTAAACTTTaGGGGGATCACATCTCCAAGCCTTGGGAGTTCCGG +
Preference number: 6 (lower is better)
Translates to: RHPSVSHSPTKL*GDHISKPWEFR
Trigger: CCGGAACTCCCAAGGCTTGGAGATGTGATCCCCCAAAAGTTTAGTCGGCGAATGGGAGACTGAAGGGTGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358373.7
CDS CAA 72 bp AACAGTGGGAAGGAGCTGGATCCTCGCTGCCTTTGTTaGCAGAGGGACACAACCAGCCAACACACTTCCAGA +
Preference number: 6 (lower is better)
Translates to: NSGKELDPRCLC*QRDTTSQHTSR
Trigger: TCTGGAAGTGTGTTGGCTGGTTGTGTCCCTCTGCAAACAAAGGCAGCGAGGATCCAGCTCCTTCCCACTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423518.5
CDS CAA 72 bp ACAGAACAGTGGGAAGGAGCTGGATCCTCGCTGCCTTaGTTTGCAGAGGGACACAACCAGCCAACACACTTC +
Preference number: 6 (lower is better)
Translates to: TEQWEGAGSSLP*FAEGHNQPTHF
Trigger: GAAGTGTGTTGGCTGGTTGTGTCCCTCTGCAAACAAAGGCAGCGAGGATCCAGCTCCTTCCCACTGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423518.5
CDS CCA 72 bp TCCGTGCAGGCAGAAGTGGGTCCCAAGGTTGAGATATaGTGCAAGAGTAGGAGGCACAGGTTCAAGCTGAAT +
Preference number: 6 (lower is better)
Translates to: SVQAEVGPKVEI*CKSRRHRFKLN
Trigger: ATTCAGCTTGAACCTGTGCCTCCTACTCTTGCACCATATCTCAACCTTGGGACCCACTTCTGCCTGCACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473254.1
CDS CAA 90 bp CCCATCCACCCGTATGGAATGGGCATACTCCTGGCTGTGAGTTCTTaGCATCATTGTGAGGATCCAGTAGAACTTGGCGGTCAAGAGGAA +
Preference number: 6 (lower is better)
Translates to: PIHPYGMGILLAVSS*HHCEDPVELGGQEE
Trigger: TTCCTCTTGACCGCCAAGTTCTACTGGATCCTCACAATGATGCAAAGAACTCACAGCCAGGAGTATGCCCATTCCATACGGGTGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
ENST00000457830.1
ENST00000472701.5
CDS CAA 90 bp ACGGAGCTTGCTGCAGCACCTATGACGCCAGAAATCTTGTCGGGCTaGGTGAAAATGGGTGGATCTCCATTAGCACACTTCACATCCGAA +
Preference number: 6 (lower is better)
Translates to: TELAAAPMTPEILSG*VKMGGSPLAHFTSE
Trigger: TTCGGATGTGAAGTGTGCTAATGGAGATCCACCCATTTTCACCAAGCCCGACAAGATTTCTGGCGTCATAGGTGCTGCAGCAAGCTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
ENST00000457830.1
ENST00000472701.5
CDS CAA 90 bp ATGATGGACACGGAGCTTGCTGCAGCACCTATGACGCCAGAAATCTaGTCGGGCTTGGTGAAAATGGGTGGATCTCCATTAGCACACTTC +
Preference number: 6 (lower is better)
Translates to: MMDTELAAAPMTPEI*SGLVKMGGSPLAHF
Trigger: GAAGTGTGCTAATGGAGATCCACCCATTTTCACCAAGCCCGACAAGATTTCTGGCGTCATAGGTGCTGCAGCAAGCTCCGTGTCCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
ENST00000457830.1
ENST00000472701.5
CDS CAA 72 bp GCTGCAGCACCTATGACGCCAGAAATCTTGTCGGGCTaGGTGAAAATGGGTGGATCTCCATTAGCACACTTC +
Preference number: 6 (lower is better)
Translates to: AAAPMTPEILSG*VKMGGSPLAHF
Trigger: GAAGTGTGCTAATGGAGATCCACCCATTTTCACCAAGCCCGACAAGATTTCTGGCGTCATAGGTGCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
ENST00000457830.1
ENST00000472701.5
CDS CAA 72 bp ACGGAGCTTGCTGCAGCACCTATGACGCCAGAAATCTaGTCGGGCTTGGTGAAAATGGGTGGATCTCCATTA +
Preference number: 6 (lower is better)
Translates to: TELAAAPMTPEI*SGLVKMGGSPL
Trigger: TAATGGAGATCCACCCATTTTCACCAAGCCCGACAAGATTTCTGGCGTCATAGGTGCTGCAGCAAGCTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
ENST00000457830.1
ENST00000472701.5
CDS CAA 72 bp TTAAGTCTTCCGTGCAGGCAGAAGTGGGTCCCAAGGTaGAGATATGGTGCAAGAGTAGGAGGCACAGGTTCA +
Preference number: 6 (lower is better)
Translates to: LSLPCRQKWVPR*RYGARVGGTGS
Trigger: TGAACCTGTGCCTCCTACTCTTGCACCATATCTCAACCTTGGGACCCACTTCTGCCTGCACGGAAGACTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473254.1
CDS TCA 72 bp GGGCATACTCCTGGCTGTGAGTTCTTTGCATCATTGTaGGGATCCAGTAGAACTTGGCGGTCAAGAGGAAGA +
Preference number: 6 (lower is better)
Translates to: GHTPGCEFFASL*GSSRTWRSRGR
Trigger: TCTTCCTCTTGACCGCCAAGTTCTACTGGATCCTCACAATGATGCAAAGAACTCACAGCCAGGAGTATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
ENST00000457830.1
ENST00000472701.5
CDS GCA 72 bp GTGCAGGCAGAAGTGGGTCCCAAGGTTGAGATATGGTaGAAGAGTAGGAGGCACAGGTTCAAGCTGAATTAT +
Preference number: 6 (lower is better)
Translates to: VQAEVGPKVEIW*KSRRHRFKLNY
Trigger: ATAATTCAGCTTGAACCTGTGCCTCCTACTCTTGCACCATATCTCAACCTTGGGACCCACTTCTGCCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473254.1
CDS CCA 72 bp GACGCCAGAAATCTTGTCGGGCTTGGTGAAAATGGGTaGATCTCCATTAGCACACTTCACATCCGAAGCATC +
Preference number: 6 (lower is better)
Translates to: DARNLVGLGENG*ISISTLHIRSI
Trigger: GATGCTTCGGATGTGAAGTGTGCTAATGGAGATCCACCCATTTTCACCAAGCCCGACAAGATTTCTGGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
ENST00000457830.1
ENST00000472701.5
CDS CAA 72 bp CCGTATGGAATGGGCATACTCCTGGCTGTGAGTTCTTaGCATCATTGTGAGGATCCAGTAGAACTTGGCGGT +
Preference number: 6 (lower is better)
Translates to: PYGMGILLAVSS*HHCEDPVELGG
Trigger: ACCGCCAAGTTCTACTGGATCCTCACAATGATGCAAAGAACTCACAGCCAGGAGTATGCCCATTCCATACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
ENST00000457830.1
ENST00000472701.5
CDS TCA 72 bp TTACTTGTGATCCCTGGACCTGCTACCAGGAGACAATaGGGGCTGACTGATAAGAAAGACCACATGCTAAGG +
Preference number: 6 (lower is better)
Translates to: LLVIPGPATRRQ*GLTDKKDHMLR
Trigger: CCTTAGCATGTGGTCTTTCTTATCAGTCAGCCCTCATTGTCTCCTGGTAGCAGGTCCAGGGATCACAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423518.5
CDS TCA 72 bp CTGCTCCACTGTCTCATGCCAGGTCTTTTCATTACATaGACTGCAGGATGCTCTCTCTCAGGCACAGTGTTT +
Preference number: 6 (lower is better)
Translates to: LLHCLMPGLFIT*TAGCSLSGTVF
Trigger: AAACACTGTGCCTGAGAGAGAGCATCCTGCAGTTCATGTAATGAAAAGACCTGGCATGAGACAGTGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465800.1
CDS TCA 72 bp TCCTGGGTGGAATCTATTAGGAAGTGCTCCCGCTCTTaGCCATCGGAAACTCTACAGATGACTTACTGTTGG +
Preference number: 6 (lower is better)
Translates to: SWVESIRKCSRS*PSETLQMTYCW
Trigger: CCAACAGTAAGTCATCTGTAGAGTTTCCGATGGTCAAGAGCGGGAGCACTTCCTAATAGATTCCACCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472701.5
CDS CAA 72 bp CCAACCCTGTTTTCCAGTTCTGTCAGTTGGCAGGATTaGTATTCAATCGCGGTAGTAGCCCAGACTCTAGTG +
Preference number: 6 (lower is better)
Translates to: PTLFSSSVSWQD*YSIAVVAQTLV
Trigger: CACTAGAGTCTGGGCTACTACCGCGATTGAATACAAATCCTGCCAACTGACAGAACTGGAAAACAGGGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412160.1
CDS CAA 90 bp AGGCTGATCGCTTTCCCTCGCATACCATTTTCTCCACAGGTGGTATaGCAATCCAAGACCCAAAGTTTATTCTTGCCACAGAAGAAAGGG +
Preference number: 6 (lower is better)
Translates to: RLIAFPRIPFSPQVV*QSKTQSLFLPQKKG
Trigger: CCCTTTCTTCTGTGGCAAGAATAAACTTTGGGTCTTGGATTGCAATACCACCTGTGGAGAAAATGGTATGCGAGGGAAAGCGATCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339582.7
ENST00000358373.7
ENST00000412160.1
ENST00000457830.1
ENST00000472701.5
CDS CAA 90 bp GTGCTCCCGCTCTTGACCATCGGAAACTCTACAGATGACTTACTGTaGGTTTCAAGACTCTCACAGAGTTCACTTTTCACCTCGCCATTT +
Preference number: 6 (lower is better)
Translates to: VLPLLTIGNSTDDLL*VSRLSQSSLFTSPF
Trigger: AAATGGCGAGGTGAAAAGTGAACTCTGTGAGAGTCTTGAAACCAACAGTAAGTCATCTGTAGAGTTTCCGATGGTCAAGAGCGGGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358373.7
ENST00000472701.5
ENST00000495315.1
CDS CAA 90 bp TTTCATTACATGAACTGCAGGATGCTCTCTCTCAGGCACAGTGTTTaGGGGGCAATGCCTCTAAATGATGCCTCCATTGAGGCAAAGATC +
Preference number: 6 (lower is better)
Translates to: FHYMNCRMLSLRHSV*GAMPLNDASIEAKI
Trigger: GATCTTTGCCTCAATGGAGGCATCATTTAGAGGCATTGCCCCCAAAACACTGTGCCTGAGAGAGAGCATCCTGCAGTTCATGTAATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465800.1
CDS TCA 72 bp GGTAGAGGAAGATCTATTAGGAAGTGCTCCCGCTCTTaGCCATCGGAAACTCTACAGATGACTTACTGTTGG +
Preference number: 6 (lower is better)
Translates to: GRGRSIRKCSRS*PSETLQMTYCW
Trigger: CCAACAGTAAGTCATCTGTAGAGTTTCCGATGGTCAAGAGCGGGAGCACTTCCTAATAGATCTTCCTCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358373.7
ENST00000495315.1
CDS GCA 72 bp GGAAAGGAGATCAGGGTCCTTGTTAATCTGGTCAATTaGATAAAGCATGGCCTCCAGTCTGTGAATCCCCTT +
Preference number: 6 (lower is better)
Translates to: GKEIRVLVNLVN*IKHGLQSVNPL
Trigger: AAGGGGATTCACAGACTGGAGGCCATGCTTTATGCAATTGACCAGATTAACAAGGACCCTGATCTCCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
ENST00000457830.1
ENST00000472701.5
CDS CCA 72 bp TGCCTGGGGAGTTATTTGGTGCTGATCCAACTACACTaGCTTCCTTTTTGTTTCACCTGCAGCACTCATACA +
Preference number: 6 (lower is better)
Translates to: CLGSYLVLIQLH*LPFCFTCSTHT
Trigger: TGTATGAGTGCTGCAGGTGAAACAAAAAGGAAGCCAGTGTAGTTGGATCAGCACCAAATAACTCCCCAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473254.1
CDS CAA 90 bp TTTTCTTGTATCTCCACCACCAACCCTGTTTTCCAGTTCTGTCAGTaGGCAGGATTTGTATTCAATCGCGGTAGTAGCCCAGACTCTAGT +
Preference number: 6 (lower is better)
Translates to: FSCISTTNPVFQFCQ*AGFVFNRGSSPDSS
Trigger: ACTAGAGTCTGGGCTACTACCGCGATTGAATACAAATCCTGCCAACTGACAGAACTGGAAAACAGGGTTGGTGGTGGAGATACAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412160.1
CDS CCA 72 bp AGACAGTGCAGCTACAGTGCTAATGAAAGATGTCTGTaGTATGCTTTCCACCTAGCAGGTGTGAACAGTTGT +
Preference number: 6 (lower is better)
Translates to: RQCSYSANERCL*YAFHLAGVNSC
Trigger: ACAACTGTTCACACCTGCTAGGTGGAAAGCATACCACAGACATCTTTCATTAGCACTGTAGCTGCACTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473254.1
CDS CAA 72 bp GCTTTCCCTCGCATACCATTTTCTCCACAGGTGGTATaGCAATCCAAGACCCAAAGTTTATTCTTGCCACAG +
Preference number: 6 (lower is better)
Translates to: AFPRIPFSPQVV*QSKTQSLFLPQ
Trigger: CTGTGGCAAGAATAAACTTTGGGTCTTGGATTGCAATACCACCTGTGGAGAAAATGGTATGCGAGGGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339582.7
ENST00000358373.7
ENST00000412160.1
ENST00000457830.1
ENST00000472701.5
CDS GCA 72 bp CTTTCCCTCGCATACCATTTTCTCCACAGGTGGTATTaGAATCCAAGACCCAAAGTTTATTCTTGCCACAGA +
Preference number: 6 (lower is better)
Translates to: LSLAYHFLHRWY*NPRPKVYSCHR
Trigger: TCTGTGGCAAGAATAAACTTTGGGTCTTGGATTGCAATACCACCTGTGGAGAAAATGGTATGCGAGGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339582.7
ENST00000358373.7
ENST00000412160.1
ENST00000457830.1
ENST00000472701.5
CDS CCA 72 bp ATACCGCTCTTTGCCTTCTTTCATTCCATATTCACATaGGCTGATAATCCTTGGCCAAGCCTGAAGATCTTG +
Preference number: 6 (lower is better)
Translates to: IPLFAFFHSIFT*ADNPWPSLKIL
Trigger: CAAGATCTTCAGGCTTGGCCAAGGATTATCAGCCCATGTGAATATGGAATGAAAGAAGGCAAAGAGCGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423518.5
CDS TCA 72 bp AATTACAAATTGGACCTTTCCTTCCTGTTCATAAGATaGATCCCGAGCAATTCGCTCCAGCCCTGTGCATTT +
Preference number: 6 (lower is better)
Translates to: NYKLDLSFLFIR*IPSNSLQPCAF
Trigger: AAATGCACAGGGCTGGAGCGAATTGCTCGGGATTCATCTTATGAACAGGAAGGAAAGGTCCAATTTGTAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
ENST00000448250.6
ENST00000472701.5
ENST00000480995.5
CDS CCA 72 bp TGCATAGCTGATTTGAGGTATCTGATCCAACTACACTaGCTTCCTTTTTGTTTCACCTGCAGCACTCATACA +
Preference number: 6 (lower is better)
Translates to: CIADLRYLIQLH*LPFCFTCSTHT
Trigger: TGTATGAGTGCTGCAGGTGAAACAAAAAGGAAGCCAGTGTAGTTGGATCAGATACCTCAAATCAGCTATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480995.5
CDS TCA 72 bp CCACTTTTAGATGAAGCTGATTGGTCCAGTGGCCGATaGCTTTGTACTCTGTGCTTTTGTTGGTTATTTGAT +
Preference number: 6 (lower is better)
Translates to: PLLDEADWSSGR*LCTLCFCWLFD
Trigger: ATCAAATAACCAACAAAAGCACAGAGTACAAAGTCATCGGCCACTGGACCAATCAGCTTCATCTAAAAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339582.7
ENST00000341617.7
ENST00000358373.7
ENST00000472701.5
CDS TCA 72 bp GCAAAAATTAGAACATCTGAGGTTCTGATGTTGGGATaGGGTCAACAATTCATGTCCTTGAAATCAGCCTTG +
Preference number: 6 (lower is better)
Translates to: AKIRTSEVLMLG*GQQFMSLKSAL
Trigger: CAAGGCTGATTTCAAGGACATGAATTGTTGACCTCATCCCAACATCAGAACCTCAGATGTTCTAATTTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339582.7
ENST00000358373.7
ENST00000412160.1
ENST00000457830.1
ENST00000472701.5
CDS GCA 72 bp CATTCAACAAGCACTCTCAGATTATCTTCTAGACAGTaGAGCTACAGTGCTAATGAAAGATGTCTGTGGTAT +
Preference number: 6 (lower is better)
Translates to: HSTSTLRLSSRQ*SYSANERCLWY
Trigger: ATACCACAGACATCTTTCATTAGCACTGTAGCTGCACTGTCTAGAAGATAATCTGAGAGTGCTTGTTGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465800.1
ENST00000473254.1
CDS CAA 72 bp CTTGCAGAAAAGGAAGAGAACAAACTATACCGCTCTTaGCCTTCTTTCATTCCATATTCACATGGGCTGATA +
Preference number: 6 (lower is better)
Translates to: LAEKEENKLYRS*PSFIPYSHGLI
Trigger: TATCAGCCCATGTGAATATGGAATGAAAGAAGGCAAAGAGCGGTATAGTTTGTTCTCTTCCTTTTCTGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423518.5
CDS CAA 72 bp GTCTTGTCAAAAACATTGTATGTAAGAAGAAGAAACTaGAGAAAGGTGGTCAGTAGAGAGCCTCTTCGACTA +
Preference number: 6 (lower is better)
Translates to: VLSKTLYVRRRN*RKVVSREPLRL
Trigger: TAGTCGAAGAGGCTCTCTACTGACCACCTTTCTCAAGTTTCTTCTTCTTACATACAATGTTTTTGACAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465844.1
CDS CAA 90 bp ATATGCTTAGTCTTGTCAAAAACATTGTATGTAAGAAGAAGAAACTaGAGAAAGGTGGTCAGTAGAGAGCCTCTTCGACTAATAGACAGT +
Preference number: 6 (lower is better)
Translates to: ICLVLSKTLYVRRRN*RKVVSREPLRLIDS
Trigger: ACTGTCTATTAGTCGAAGAGGCTCTCTACTGACCACCTTTCTCAAGTTTCTTCTTCTTACATACAATGTTTTTGACAAGACTAAGCATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465844.1
CDS CAA 90 bp AATAGATCAGTTAAATTCTACTGGTTGAGCACAGATTTCTGTGTATaGTTATCATGTGCTTTTTCCTGGGTGGAATCTATTAGGAAGTGC +
Preference number: 6 (lower is better)
Translates to: NRSVKFYWLSTDFCV*LSCAFSWVESIRKC
Trigger: GCACTTCCTAATAGATTCCACCCAGGAAAAAGCACATGATAACAATACACAGAAATCTGTGCTCAACCAGTAGAATTTAACTGATCTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472701.5