RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRM7 (Homo sapiens)

Ensembl gene IDs: ENSG00000196277

Ensembl transcript IDs: ENST00000357716.9, ENST00000389335.7, ENST00000389336.8, ENST00000402647.6, ENST00000435689.5, ENST00000440923.7, ENST00000443259.1, ENST00000445087.1, ENST00000448328.6, ENST00000458641.2, ENST00000461677.6, ENST00000463676.6, ENST00000467425.5, ENST00000471242.2, ENST00000486284.5

Found 867 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGGATCCTCTAACACTGGTCTCCCGGCCGGGGAAGCTCCTCCGGTaGTGGGAAGCGGGTAGGACCAAAGAGTCCTATGCCAGGTTGGGT +
Preference number: 1 (lower is better)
Translates to: LDPLTLVSRPGKLLR*WEAGRTKESYARLG
Trigger: ACCCAACCTGGCATAGGACTCTTTGGTCCTACCCGCTTCCCATCACCGGAGGAGCTTCCCCGGCCGGGAGACCAGTGTTAGAGGATCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR TCA 90 bp TCCTGTGGCTCTCAGTGGTCCATTCTAAAGAGCCAGGGCGGGACTTaGGTTTCAACACTCCCTTTGGTAGGGAAGGTCCACAATTGCAGC +
Preference number: 1 (lower is better)
Translates to: SCGSQWSILKSQGGT*VSTLPLVGKVHNCS
Trigger: GCTGCAATTGTGGACCTTCCCTACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR CCA 90 bp AGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAACGGTCCTGTaGCTCTCAGTGGTCCATTCTAAAGAGCCAGGGCGGGACTTGAGT +
Preference number: 1 (lower is better)
Translates to: RSTYVIRQVSPKTVL*LSVVHSKEPGRDLS
Trigger: ACTCAAGTCCCGCCCTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGACCGTTTTGGGGCTGACCTGTCTTATTACGTATGTACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR CCA 90 bp TGTTTGATAATTCTATCAAAGTCAATGGTCCTGTCTTTGCGTTCCTaGGGGATTCTCACGGACTGGGCAATGCAGAGTCCACCTGCCTCT +
Preference number: 1 (lower is better)
Translates to: CLIILSKSMVLSLRS*GILTDWAMQSPPAS
Trigger: AGAGGCAGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTTTGATAGAATTATCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435689.5
3UTR TCA 90 bp GAGAGAATAGGGCTCTATGAAAACAAGGCATTCGAAAACAAACAGTaGACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCAC +
Preference number: 1 (lower is better)
Translates to: ERIGLYENKAFENKQ*TEVRHQMAKCKGPH
Trigger: GTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTTCATAGAGCCCTATTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR GCA 90 bp GCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAATCCTCTTTGTaGAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTAGAGAAAGT +
Preference number: 1 (lower is better)
Translates to: AQEEQALEMLSQSSL*KLRSSEVTLIPRES
Trigger: ACTTTCTCTAGGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
3UTR CCA 90 bp ACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATaGCAAAGTGCAAAGGTCCTCACAAACTGTACAGAAAATTTCAAA +
Preference number: 1 (lower is better)
Translates to: TRHSKTNSEPRYDIR*QSAKVLTNCTENFK
Trigger: TTTGAAATTTTCTGTACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR TCA 90 bp CCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTGGGAAGCTCCTCCGGTaGTGGGAAGCGGGTAGGACC +
Preference number: 2 (lower is better)
Translates to: PLVGKVHNCSRVGSADVSGKLLR*WEAGRT
Trigger: GGTCCTACCCGCTTCCCATCACCGGAGGAGCTTCCC...ACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR TCA 90 bp GTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTAGGGGGAAGCTCCTCCGGTaGTGGGAAGCGGGTAGGACC +
Preference number: 2 (lower is better)
Translates to: VHSKEPGRDLSFNTPFGRGKLLR*WEAGRT
Trigger: GGTCCTACCCGCTTCCCATCACCGGAGGAGCTTCCC...CCTACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR CCA 90 bp TTCCACCGTGGCTCGCTTGGGCTGAATGGTGATGGCCCCTTCTGCGATATCTTCCTTGGTCAGCTCTTTTaGCTGCTGCAAGGATCTGCT +
Preference number: 2 (lower is better)
Translates to: FHRGSLGLNGDGPFCDIFLGQLF*LLQGSA
Trigger: AGCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAG...GAAGATATCGCAGAAGGGGCCATCACCATTCAGCCCAAGCGAGCCACGGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435689.5
3UTR CAA 90 bp GTCCTGTGGCTCTCAGTGGTCCATTCTAAAGAGCCAGGGCGGGACTaGAGTTTCAACACTCCCTTTGGTAGGGAAGGTCCACAATTGCAG +
Preference number: 2 (lower is better)
Translates to: VLWLSVVHSKEPGRD*SFNTPFGREGPQLQ
Trigger: CTGCAATTGTGGACCTTCCCTACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR GCA 90 bp GACTTGAGTTTCAACACTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTGGGAAGGTCCACAATTaGAGCCGAGTTGGCAGTGCT +
Preference number: 2 (lower is better)
Translates to: DLSFNTPFGREGPQLQPSGKVHN*SRVGSA
Trigger: AGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCC...ACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAGTGTTGAAACTCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR CCA 90 bp ATGGCCAACTTGGTCAGCTCTTTTGGCTGCTGCAAGGATCTGCTTTATATCCTCGGGATTCTCACGGACTaGGCAATGCAGAGTCCACCT +
Preference number: 2 (lower is better)
Translates to: MANLVSSFGCCKDLLYILGILTD*AMQSPP
Trigger: AGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCC...GAGGATATAAAGCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAGTTGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435689.5
3UTR CAA 90 bp GCAAAAATCACGACGGCCCTGGAGTTGGGGGTGTCCAGGAGCTGTTaGATAATTCTATCAAAGTCAATGGTCCTGTCTTTGCGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: AKITTALELGVSRSC*IILSKSMVLSLRSW
Trigger: CCAGGAACGCAAAGACAGGACCATTGACTTTGATAGAATTATCAAACAGCTCCTGGACACCCCCAACTCCAGGGCCGTCGTGATTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435689.5
3UTR CAA 90 bp TCCAGGAGCTGTTTGATAATTCTATCAAAGTCAATGGTCCTGTCTTaGCGTTCCTGGGGGATTCTCACGGACTGGGCAATGCAGAGTCCA +
Preference number: 2 (lower is better)
Translates to: SRSCLIILSKSMVLS*RSWGILTDWAMQSP
Trigger: TGGACTCTGCATTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTTTGATAGAATTATCAAACAGCTCCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435689.5
3UTR-3UTR GCA 90 bp ATGGCCAACTTGGTCAGCTCTTTTGGCTGCTGCAAGGATCTGCTTTATATCCTCGCCTCTTTGGAAATCTaGGTGAAGGACTCCACACCT +
Preference number: 2 (lower is better)
Translates to: MANLVSSFGCCKDLLYILASLEI*VKDSTP
Trigger: AGGTGTGGAGTCCTTCACGCAGATTTCCAAAGAGGC...GAGGATATAAAGCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAGTTGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435689.5
3UTR-3UTR GCA 90 bp ACCCAAAGAAAATGGCCAACTTGGTCAGCTCTTTTGGCTGCTGCAAGGATCTGCAATGCAGAGTCCACCTaGCTCTTTGGAAATCTGCGT +
Preference number: 2 (lower is better)
Translates to: TQRKWPTWSALLAAARICNAEST*LFGNLR
Trigger: ACGCAGATTTCCAAAGAGGCAGGTGGACTCTGCATT...GCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCTTTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435689.5
3UTR-3UTR CCA 90 bp GGGCTGAATGGTGATGGCCCCTTCTGCGATATCTTCATGCTGGTGCAGTGGGTTTTCTATCAAAGTCAATaGTCCTGTCTTTGCGTTCCT +
Preference number: 2 (lower is better)
Translates to: GLNGDGPFCDIFMLVQWVFYQSQ*SCLCVP
Trigger: AGGAACGCAAAGACAGGACCATTGACTTTGATAGAA...AACCCACTGCACCAGCATGAAGATATCGCAGAAGGGGCCATCACCATTCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435689.5
3UTR-3UTR CCA 90 bp TCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCGGTCTTCCTCCTCCATaGTTCCATGGAATGGAACAG +
Preference number: 2 (lower is better)
Translates to: SKTNSEPRYDIRWQSAKVGLPPP*FHGMEQ
Trigger: CTGTTCCATTCCATGGAACCATGGAGGAGGAAGACC...GACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR CCA 90 bp ACCCAAAGAAAATGGCCAACTTGGTCAGCTCTTTTGGCTGCTGCAAGGATCTGCTTATATCCTCATCGTTaGCAAAAATCACGACGGCCC +
Preference number: 2 (lower is better)
Translates to: TQRKWPTWSALLAAARICLYPHR*QKSRRP
Trigger: GGGCCGTCGTGATTTTTGCCAACGATGAGGATATAA...GCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCTTTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435689.5
3UTR-3UTR TCA 90 bp TTCAAAACCTTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAAGCCAGGGCGGGACTTaGGTTTCAACACTCCCTTTG +
Preference number: 2 (lower is better)
Translates to: FKTLQPRSTYVIRQVSPKSQGGT*VSTLPL
Trigger: CAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCT...TTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAAGGTTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR TCA 90 bp TTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTCCTCTTTGTGCAAGCTaGGGTCCTCAGAGGTTACTT +
Preference number: 2 (lower is better)
Translates to: LEMLSQSSLCKLRSSEVTPLCAS*GPQRLL
Trigger: AAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGG...AGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
3UTR-3UTR CCA 90 bp CAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAACATGGTTCCATGGAATaGAACAGGTTAGATAACCAG +
Preference number: 2 (lower is better)
Translates to: QTVNRGTTSDGKVQRSSQHGSME*NRLDNQ
Trigger: CTGGTTATCTAACCTGTTCCATTCCATGGAACCATG...TTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486284.5
3UTR-3UTR GCA 90 bp ACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTTCTCAATCCTCTTTGTaGAAGCTGAGGTCCTCAGAG +
Preference number: 2 (lower is better)
Translates to: TENGVADPCHVFLSVGSASQSSL*KLRSSE
Trigger: CTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGA...AGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
3UTR-3UTR CCA 90 bp AAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGGTACGACATCAGATaGCAAAGTGCAAAGGTCCTC +
Preference number: 2 (lower is better)
Translates to: KTRHSKTNSEPRYDIRWQRYDIR*QSAKVL
Trigger: GAGGACCTTTGCACTTTGCCATCTGATGTCGTACCT...TTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR TCA 90 bp GCTTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAACATCTCACTGCCTAGTTCTACCTTTTTaGGAAGACTACCTTGGCTGT +
Preference number: 2 (lower is better)
Translates to: ASSIFGQFQGSNMITSHCLVLPF*EDYLGC
Trigger: ACAGCCAAGGTAGTCTTCTCAAAAAGGTAGAACTAG...GCAGTGAGATGTTATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000443259.1
3UTR-3UTR CCA 90 bp ACCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTCCCAAAACGGTCCTGTaGCTCTCAGTGGTCCATTCT +
Preference number: 2 (lower is better)
Translates to: TFLLCNLSYTKDRWGILSPKTVL*LSVVHS
Trigger: AGAATGGACCACTGAGAGCCACAGGACCGTTTTGGG...AGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR CCA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATTGTTTTCCTAAGTGTTaGGTCAGCTCAAGAAGAACA +
Preference number: 2 (lower is better)
Translates to: QCRWSVAVALLTENGVADCFPKC*VSSRRT
Trigger: TGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
3UTR CAA 90 bp TGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTaGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: CHVFLSVGSAQEEQA*EMLSQSSLCKLRSS
Trigger: TGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
3UTR-3UTR CCA 90 bp ACCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTGGTCTTCCTCCTCCATaGTTCCATGGAATGGAACAG +
Preference number: 2 (lower is better)
Translates to: TFLLCNLSYTKDRWGILSGLPPP*FHGMEQ
Trigger: CTGTTCCATTCCATGGAACCATGGAGGAGGAAGACC...AGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR CCA 90 bp ACCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTTCCTGTGGCTCTCAGTaGTCCATTCTAAAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: TFLLCNLSYTKDRWGILSSCGSQ*SILKSQ
Trigger: CTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGA...AGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR CCA 90 bp AGCTTTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTGTTTTCCTAAGTGTTaGGTCAGCTCAAGAAGAACA +
Preference number: 2 (lower is better)
Translates to: SFGNVISILFVQAEVLRGCFPKC*VSSRRT
Trigger: TGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA...ACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
3UTR-3UTR CCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATAGATGCCAGTGCAGATaGTCAGTAGCAGTTGCACTT +
Preference number: 2 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNRCQCR*SVAVAL
Trigger: AAGTGCAACTGCTACTGACCATCTGCACTGGCATCT...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389335.7
ENST00000440923.7
3UTR CAA 90 bp TCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAATCCTCTTaGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTAGAGAA +
Preference number: 2 (lower is better)
Translates to: SAQEEQALEMLSQSS*CKLRSSEVTLIPRE
Trigger: TTCTCTAGGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
3UTR-3UTR GCA 90 bp CATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATTGACTAGATGCCAGTaGAGATGGTCAGTAGCAGTT +
Preference number: 2 (lower is better)
Translates to: HVFLSVGSAQEEQALEMLLTRCQ*RWSVAV
Trigger: AACTGCTACTGACCATCTGCACTGGCATCTAGTCAA...TAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389335.7
ENST00000440923.7
3UTR-3UTR GCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATTTGACTAGATGCCAGTaGAGATGGTCAGTAGCAGTT +
Preference number: 2 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNLTRCQ*RWSVAV
Trigger: AACTGCTACTGACCATCTGCACTGGCATCTAGTCAA...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389335.7
ENST00000440923.7
3UTR-3UTR CCA 90 bp TCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGATGTTTTCCTAAGTGTTaGGTCAGCTCAAGAAGAACA +
Preference number: 2 (lower is better)
Translates to: SMSCFPKCWVSSRRTSFGCFPKC*VSSRRT
Trigger: TGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA...TCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
3UTR-3UTR TCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATCCTCAGAGGTTACTTTaGTTCCTAGAGAAAGTTAAT +
Preference number: 2 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNPQRLL*FLEKVN
Trigger: ATTAACTTTCTCTAGGAATCAAAGTAACCTCTGAGG...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
3UTR TCA 72 bp CTAACACTGGTCTCCCGGCCGGGGAAGCTCCTCCGGTaGTGGGAAGCGGGTAGGACCAAAGAGTCCTATGCC +
Preference number: 3 (lower is better)
Translates to: LTLVSRPGKLLR*WEAGRTKESYA
Trigger: GGCATAGGACTCTTTGGTCCTACCCGCTTCCCATCACCGGAGGAGCTTCCCCGGCCGGGAGACCAGTGTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR CCA 72 bp GTCCTGTCTTTGCGTTCCTGGGGGATTCTCACGGACTaGGCAATGCAGAGTCCACCTGCCTCTTTGGAAATC +
Preference number: 3 (lower is better)
Translates to: VLSLRSWGILTD*AMQSPPASLEI
Trigger: GATTTCCAAAGAGGCAGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435689.5
3UTR CCA 72 bp TACGTAATAAGACAGGTCAGCCCCAAAACGGTCCTGTaGCTCTCAGTGGTCCATTCTAAAGAGCCAGGGCGG +
Preference number: 3 (lower is better)
Translates to: YVIRQVSPKTVL*LSVVHSKEPGR
Trigger: CCGCCCTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGACCGTTTTGGGGCTGACCTGTCTTATTACGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR CAA 90 bp GTCCTGTGGCTCTCAGTGGTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAGCTGTTTAGGTCGCTaGGATCCTCTAACACTGGTC +
Preference number: 3 (lower is better)
Translates to: VLWLSVVHSKEPGRDLSFSCLGR*DPLTLV
Trigger: GACCAGTGTTAGAGGATCCAAGCGACCTAAACAGCT...GAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR CAA 90 bp AAGTCAATGGTCCTGTCTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCAATGAGTCCACCTGCCTCTTaGGAAATCTGCGTGAAGGAC +
Preference number: 3 (lower is better)
Translates to: KSMVLSLRSWGILTDWAMSPPAS*EICVKD
Trigger: GTCCTTCACGCAGATTTCCAAAGAGGCAGGTGGACT...CATTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435689.5
3UTR TCA 72 bp TCTCAGTGGTCCATTCTAAAGAGCCAGGGCGGGACTTaGGTTTCAACACTCCCTTTGGTAGGGAAGGTCCAC +
Preference number: 3 (lower is better)
Translates to: SQWSILKSQGGT*VSTLPLVGKVH
Trigger: GTGGACCTTCCCTACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGACCACTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR CAA 90 bp CAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAAGGGAAGGTCCACAATaGCAGCCGAGTTGGCAGTGC +
Preference number: 3 (lower is better)
Translates to: QTVNRGTTSDGKVQRSSQREGPQ*QPSWQC
Trigger: GCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCT...TTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR CAA 90 bp GTGGTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTGAGTCCTATGCCAGGTaGGGTGACAAAATAACTGAG +
Preference number: 3 (lower is better)
Translates to: VVHSKEPGRDLSFNTPFGESYAR*GDKITE
Trigger: CTCAGTTATTTTGTCACCCAACCTGGCATAGGACTC...ACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR GCA 72 bp GTTTCAACACTCCCTTTGGTAGGGAAGGTCCACAATTaGAGCCGAGTTGGCAGTGCTGATGTCAGTGACTTA +
Preference number: 3 (lower is better)
Translates to: VSTLPLVGKVHN*SRVGSADVSDL
Trigger: TAAGTCACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAGTGTTGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR CCA 72 bp ATTCTATCAAAGTCAATGGTCCTGTCTTTGCGTTCCTaGGGGATTCTCACGGACTGGGCAATGCAGAGTCCA +
Preference number: 3 (lower is better)
Translates to: ILSKSMVLSLRS*GILTDWAMQSP
Trigger: TGGACTCTGCATTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTTTGATAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435689.5
3UTR TCA 72 bp CAATGCAGAGTCCACCTGCCTCTTTGGAAATCTGCGTaGAGGACTCCACACCTTTCTCTCCATAACTTCCTT +
Preference number: 3 (lower is better)
Translates to: QCRVHLPLWKSA*RTPHLSLHNFL
Trigger: AAGGAAGTTATGGAGAGAAAGGTGTGGAGTCCTTCACGCAGATTTCCAAAGAGGCAGGTGGACTCTGCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435689.5
3UTR-3UTR CAA 90 bp ATGAAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGACAATTGCAGCCGAGTaGGCAGTGCTGATGTCAGTG +
Preference number: 3 (lower is better)
Translates to: MKTRHSKTNSEPRYDIRWTIAAE*AVLMSV
Trigger: CACTGACATCAGCACTGCCAACTCGGCTGCAATTGT...CCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR GCA 72 bp CCAAAGAAAATGGCCAACTTGGTCAGCTCTTTTGGCTaGTGCAAGGATCTGCTTTATATCCTCATCGTTGGC +
Preference number: 3 (lower is better)
Translates to: PKKMANLVSSFG*CKDLLYILIVG
Trigger: GCCAACGATGAGGATATAAAGCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435689.5
3UTR-3UTR CAA 90 bp CCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTCGAGCCAGGGCGGGACTaGAGTTTCAACACTCCCTTT +
Preference number: 3 (lower is better)
Translates to: PSFYVTYHIPKIGGAYFLEPGRD*SFNTPF
Trigger: AAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTC...GAGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR TCA 72 bp GGGCTCTATGAAAACAAGGCATTCGAAAACAAACAGTaGACCGAGGTACGACATCAGATGGCAAAGTGCAAA +
Preference number: 3 (lower is better)
Translates to: GLYENKAFENKQ*TEVRHQMAKCK
Trigger: TTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTTCATAGAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR CCA 72 bp TCGAAAACAAACAGTGAACCGAGGTACGACATCAGATaGCAAAGTGCAAAGGTCCTCACAAACTGTACAGAA +
Preference number: 3 (lower is better)
Translates to: SKTNSEPRYDIR*QSAKVLTNCTE
Trigger: TTCTGTACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR CAA 90 bp CCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTCAGCTGTTTAGGTCGCTaGGATCCTCTAACACTGGTC +
Preference number: 3 (lower is better)
Translates to: PSFYVTYHIPKIGGAYFLSCLGR*DPLTLV
Trigger: GACCAGTGTTAGAGGATCCAAGCGACCTAAACAGCT...GAGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR CAA 90 bp GCTTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAACATCTCACTGCTCTAGTTCTACCTTTTaGAGAAGACTACCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: ASSIFGQFQGSNMITSHCSSSTF*RRLPWL
Trigger: CAGCCAAGGTAGTCTTCTCAAAAAGGTAGAACTAGA...GCAGTGAGATGTTATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443259.1
3UTR-3UTR CAA 90 bp CCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTCGAGTCCTATGCCAGGTaGGGTGACAAAATAACTGAG +
Preference number: 3 (lower is better)
Translates to: PSFYVTYHIPKIGGAYFLESYAR*GDKITE
Trigger: CTCAGTTATTTTGTCACCCAACCTGGCATAGGACTC...GAGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR-3UTR CAA 90 bp ACCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTGTTTCAACACTCCCTTaGGTAGGGAAGGTCCACAAT +
Preference number: 3 (lower is better)
Translates to: TFLLCNLSYTKDRWGILSVSTLP*VGKVHN
Trigger: ATTGTGGACCTTCCCTACCAAAGGGAGTGTTGAAAC...AGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp GGCCGGGGAAGCTCCTCCGGTGATGGGAAGCGGGTAGGACCAAAGAGTCCTATGGGGAAGCTCCTCCGGTaGTGGGAAGCGGGTAGGACC +
Preference number: 4 (lower is better)
Translates to: GRGSSSGDGKRVGPKSPMGKLLR*WEAGRT
Trigger: GGTCCTACCCGCTTCCCATCACCGGAGGAGCTTCCC...CATAGGACTCTTTGGTCCTACCCGCTTCCCATCACCGGAGGAGCTTCCCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp AGGTCGCTTGGATCCTCTAACACTGGTCTCCCGGCCGGGGAAGCTCCTCCGGTGCGCCCAGCGTCACGTTaGGCAGTAGGTTGGGATCAC +
Preference number: 4 (lower is better)
Translates to: RSLGSSNTGLPAGEAPPVRPASR*AVGWDH
Trigger: GTGATCCCAACCTACTGCCCAACGTGACGCTGGGCG...CACCGGAGGAGCTTCCCCGGCCGGGAGACCAGTGTTAGAGGATCCAAGCGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp GGCCGGGGAAGCTCCTCCGGTGATGGGAAGCGGGTAGGACCAAAGAGTCCTATGTCGCGCTCACCGGCTTaGTGCTCGCTCTCTCCAACA +
Preference number: 4 (lower is better)
Translates to: GRGSSSGDGKRVGPKSPMSRSPA*CSLSPT
Trigger: TGTTGGAGAGAGCGAGCAGCAAGCCGGTGAGCGCGA...CATAGGACTCTTTGGTCCTACCCGCTTCCCATCACCGGAGGAGCTTCCCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp AGGTCAGCCCCAAAACGGTCCTGTGGCTCTCAGTGGTCCATTCTAAAGAGCCAGTGGAGGGAACGGTGGTaGGCTCGCCGAGGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: RSAPKRSCGSQWSILKSQWRERW*ARRGPG
Trigger: GCCCGGACCTCGGCGAGCCCACCACCGTTCCCTCCA...CTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGACCGTTTTGGGGCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp GGCCGGGGAAGCTCCTCCGGTGATGGGAAGCGGGTAGGACCAAAGAGTCCTATGGGTTGGGATCACTGTTaGTCTGGTCCAGGGCGTAGA +
Preference number: 4 (lower is better)
Translates to: GRGSSSGDGKRVGPKSPMGWDHC*SGPGRR
Trigger: TCTACGCCCTGGACCAGATCAACAGTGATCCCAACC...CATAGGACTCTTTGGTCCTACCCGCTTCCCATCACCGGAGGAGCTTCCCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp AGGTCAGCCCCAAAACGGTCCTGTGGCTCTCAGTGGTCCATTCTAAAGAGCCAGGCGGTTCGCCGTTGGTaGAGCGCACGTCGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: RSAPKRSCGSQWSILKSQAVRRW*SARRRC
Trigger: ACACCTCCGACGTGCGCTGCACCAACGGCGAACCGC...CTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGACCGTTTTGGGGCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTAGGTGGAGGGAACGGTGGTaGGCTCGCCGAGGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: VHSKEPGRDLSFNTPFGRWRERW*ARRGPG
Trigger: GCCCGGACCTCGGCGAGCCCACCACCGTTCCCTCCA...CCTACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTGACTTATTATGGCGGCGGCGGCGCTaGAGGGAACGGTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GKVHNCSRVGSADVSDLLWRRRR*RERWWA
Trigger: AGCCCACCACCGTTCCCTCCAGCGCCGCCGCCGCCA...TAATAAGTCACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCCATTGGCGGCGGCGGCGCTaGAGGGAACGGTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: YARLGDKITEGLPPPWFHWRRRR*RERWWA
Trigger: AGCCCACCACCGTTCCCTCCAGCGCCGCCGCCGCCA...ATGGAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TGGGGGATTCTCACGGACTGGGCAATGCAGAGTCCACCTGCCTCTTTGGAAATCCGACGGCCCTGGAGTTaGGGGTGTCCAGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: WGILTDWAMQSPPASLEIRRPWS*GCPGAV
Trigger: AACAGCTCCTGGACACCCCCAACTCCAGGGCCGTCG...GATTTCCAAAGAGGCAGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR GCA 90 bp AGGTCGCTTGGATCCTCTAACACTGGTCTCCCGGCCGGGGAAGCTCCTCCGGTGAATGCAGAGTCCACCTaGCTCTTTGGAAATCTGCGT +
Preference number: 4 (lower is better)
Translates to: RSLGSSNTGLPAGEAPPVNAEST*LFGNLR
Trigger: ACGCAGATTTCCAAAGAGGCAGGTGGACTCTGCATT...CACCGGAGGAGCTTCCCCGGCCGGGAGACCAGTGTTAGAGGATCCAAGCGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp AGGTCGCTTGGATCCTCTAACACTGGTCTCCCGGCCGGGGAAGCTCCTCCGGTGAGCCATAGCATAGACTaGGTCAATCACGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: RSLGSSNTGLPAGEAPPVSHSID*VNHELD
Trigger: GTCCAGTTCGTGATTGACGCAGTCTATGCTATGGCT...CACCGGAGGAGCTTCCCCGGCCGGGAGACCAGTGTTAGAGGATCCAAGCGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp GGCCGGGGAAGCTCCTCCGGTGATGGGAAGCGGGTAGGACCAAAGAGTCCTATGGCTTACATGGTAGTGTaGACACTGAGGCGGGTATCT +
Preference number: 4 (lower is better)
Translates to: GRGSSSGDGKRVGPKSPMAYMVV*TLRRVS
Trigger: AGATACCCGCCTCAGTGTGCACACTACCATGTAAGC...CATAGGACTCTTTGGTCCTACCCGCTTCCCATCACCGGAGGAGCTTCCCCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp AGGTCGCTTGGATCCTCTAACACTGGTCTCCCGGCCGGGGAAGCTCCTCCGGTGCCGGAAAGAACACACTaGCACATCTGGTTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: RSLGSSNTGLPAGEAPPVPERTH*HIWFGN
Trigger: ATTGCCAAACCAGATGTGGCAGTGTGTTCTTTCCGG...CACCGGAGGAGCTTCCCCGGCCGGGAGACCAGTGTTAGAGGATCCAAGCGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTACGCAGGGCACTCCGCTaGGACCCTTGGCGTGCACGG +
Preference number: 4 (lower is better)
Translates to: VNRGTTSDGKVQRSSQTVRRALR*DPWRAR
Trigger: CCGTGCACGCCAAGGGTCCCAGCGGAGTGCCCTGCG...TACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TTGCGTTCCTGGGGGATTCTCACGGACTGGGCAATGCAGAGTCCACCTGCCTCTCTGTCTTTGCGTTCCTaGGGGATTCTCACGGACTGG +
Preference number: 4 (lower is better)
Translates to: LRSWGILTDWAMQSPPASLSLRS*GILTDW
Trigger: CCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAG...AGAGGCAGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CCA 90 bp AAGTCAATGGTCCTGTCTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCAATGTGGGGCAGAGGCTGCTaGAGCAGGAGGCGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: KSMVLSLRSWGILTDWAMWGRGC*SRRREN
Trigger: GTTCTCTCGCCTCCTGCTCCAGCAGCCTCTGCCCCA...CATTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR TCA 90 bp TTCCACCGTGGCTCGCTTGGGCTGAATGGTGATGGCCCCTTCTGCGATATCTTCGCTTGGGCTGAATGGTaGTGGCCCCTTCTGCGATAT +
Preference number: 4 (lower is better)
Translates to: FHRGSLGLNGDGPFCDIFAWAEW*WPLLRY
Trigger: ATATCGCAGAAGGGGCCATCACCATTCAGCCCAAGC...GAAGATATCGCAGAAGGGGCCATCACCATTCAGCCCAAGCGAGCCACGGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR TCA 90 bp ATCAAAGTCAATGGTCCTGTCTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCGTGGCTCGCTTGGGCTaGATGGTGATGGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: IKVNGPVFAFLGDSHGLGVARLG*MVMAPS
Trigger: AGAAGGGGCCATCACCATTCAGCCCAAGCGAGCCAC...GCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR GCA 90 bp CGTTCCTGGGGGATTCTCACGGACTGGGCAATGCAGAGTCCACCTGCCTCTTTGGGTGATGGCCCCTTCTaGGATATCTTCATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RSWGILTDWAMQSPPASLGDGPF*DIFMLV
Trigger: CACCAGCATGAAGATATCGCAGAAGGGGCCATCACC...CAAAGAGGCAGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCCCCAGGAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR GCA 90 bp TCAAAGTCAATGGTCCTGTCTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCAGAGGCGAGAGAACACTaGGGCAGAACCCACCGCTCA +
Preference number: 4 (lower is better)
Translates to: SKSMVLSLRSWGILTDWAEAREH*GRTHRS
Trigger: TGAGCGGTGGGTTCTGCCGCAGTGTTCTCTCGCCTC...TGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CCA 90 bp CAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTAGAGAATGGCGGCGGCGGCGCTaGAGGGAACGGTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: QSSLCKLRSSEVTLIPREWRRRR*RERWWA
Trigger: AGCCCACCACCGTTCCCTCCAGCGCCGCCGCCGCCA...TTCTCTAGGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp AGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTCTCCGCTGGGACCCTTaGCGTGCACGGGGAACAGCC +
Preference number: 4 (lower is better)
Translates to: SEPRYDIRWQSAKVLTNCLRWDP*RARGTA
Trigger: GGCTGTTCCCCGTGCACGCCAAGGGTCCCAGCGGAG...ACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GTCCTGTGGCTCTCAGTGGTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCCAAACCCTTCCACCGTaGCTCGCTTGGGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: VLWLSVVHSKEPGRDLSFQTLPP*LAWAEW
Trigger: CCATTCAGCCCAAGCGAGCCACGGTGGAAGGGTTTG...GAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GGGCTGAATGGTGATGGCCCCTTCTGCGATATCTTCATGCTGGTGCAGTGGGTTTCCAAGCCGAGGATTTaGCTTGGGGTCTGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: GLNGDGPFCDIFMLVQWVSKPRI*LGVCVR
Trigger: CCTGACGCAGACCCCAAGCCAAATCCTCGGCTTGGA...AACCCACTGCACCAGCATGAAGATATCGCAGAAGGGGCCATCACCATTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR TCA 90 bp TGGGAAGCGGGTAGGACCAAAGAGTCCTATGCCAGGTTGGGTGACAAAATAACTCCCCTCGATCCGGATTaGGTGCGGGGCGTACATCTC +
Preference number: 4 (lower is better)
Translates to: WEAGRTKESYARLGDKITPLDPD*VRGVHL
Trigger: GAGATGTACGCCCCGCACTCAATCCGGATCGAGGGG...AGTTATTTTGTCACCCAACCTGGCATAGGACTCTTTGGTCCTACCCGCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp GCGGGTAGGACCAAAGAGTCCTATGCCAGGTTGGGTGACAAAATAACTGAGGGTTCCCGTTTTCCCTCTTaGTGTCGCCGCAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: AGRTKESYARLGDKITEGSRFPS*CRRRAL
Trigger: GAGTGCCCTGCGGCGACATCAAGAGGGAAAACGGGA...ACCCTCAGTTATTTTGTCACCCAACCTGGCATAGGACTCTTTGGTCCTACCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACGCTGGAGGGAACGGTaGTGGGCTCGCCGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: GVADPCHVFLSVGSAQEERWRER*WARRGP
Trigger: CGGACCTCGGCGAGCCCACCACCGTTCCCTCCAGCG...TTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTTGGCGGCGGCGGCGCTaGAGGGAACGGTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LSQSSLCKLRSSEVTLIPWRRRR*RERWWA
Trigger: AGCCCACCACCGTTCCCTCCAGCGCCGCCGCCGCCA...AGGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTAGGAGCAGCTTCCTCAGCTaGACCATGCTGCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: VHSKEPGRDLSFNTPFGRSSFLS*TMLLRL
Trigger: CAGCCGGAGCAGCATGGTCCAGCTGAGGAAGCTGCT...CCTACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TTCCACCGTGGCTCGCTTGGGCTGAATGGTGATGGCCCCTTCTGCGATATCTTCTTGGAAGGAATCGGGTaGCACCACGCGAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: FHRGSLGLNGDGPFCDIFLEGIG*HHAREE
Trigger: TTCTTCTCTCGCGTGGTGCCACCCGATTCCTTCCAA...GAAGATATCGCAGAAGGGGCCATCACCATTCAGCCCAAGCGAGCCACGGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CCA 90 bp CAAAGTCAATGGTCCTGTCTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCAAAAATCACGACGGCCCTaGAGTTGGGGGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QSQWSCLCVPGGFSRTGQKSRRP*SWGCPG
Trigger: TCCTGGACACCCCCAACTCCAGGGCCGTCGTGATTT...TTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CCA 90 bp AGGTCGCTTGGATCCTCTAACACTGGTCTCCCGGCCGGGGAAGCTCCTCCGGTGATGATGGGAATATCCTaGCATCCGGTTCGATTTTCA +
Preference number: 4 (lower is better)
Translates to: RSLGSSNTGLPAGEAPPVMMGIS*HPVRFS
Trigger: TGAAAATCGAACCGGATGCCAGGATATTCCCATCAT...CACCGGAGGAGCTTCCCCGGCCGGGAGACCAGTGTTAGAGGATCCAAGCGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp TCCTATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCTCCCGTTTTCCCTCTTaGTGTCGCCGCAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: SYARLGDKITEGLPPPWFSRFPS*CRRRAL
Trigger: GAGTGCCCTGCGGCGACATCAAGAGGGAAAACGGGA...GAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp GTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTAGGCTACTTTCTCCGGCTTaGCGAAAACCGGCGGTTCGC +
Preference number: 4 (lower is better)
Translates to: VHSKEPGRDLSFNTPFGRLLSPA*RKPAVR
Trigger: GCGAACCGCCGGTTTTCGTCAAGCCGGAGAAAGTAG...CCTACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp GGGCTGAATGGTGATGGCCCCTTCTGCGATATCTTCATGCTGGTGCAGTGGGTTGGATCCCCAGCTGTCTaGTCCCACCCAAAGAAAATG +
Preference number: 4 (lower is better)
Translates to: GLNGDGPFCDIFMLVQWVGSPAV*SHPKKM
Trigger: CATTTTCTTTGGGTGGGATCAGACAGCTGGGGATCC...AACCCACTGCACCAGCATGAAGATATCGCAGAAGGGGCCATCACCATTCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR TCA 90 bp AGGTCAGCCCCAAAACGGTCCTGTGGCTCTCAGTGGTCCATTCTAAAGAGCCAGGGATCCCCAGCTGTCTaGTCCCACCCAAAGAAAATG +
Preference number: 4 (lower is better)
Translates to: RSAPKRSCGSQWSILKSQGSPAV*SHPKKM
Trigger: CATTTTCTTTGGGTGGGATCAGACAGCTGGGGATCC...CTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGACCGTTTTGGGGCTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp CCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTAGCCAGGGCGGGACTTaGGTTTCAACACTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PLVGKVHNCSRVGSADVSSQGGT*VSTLPL
Trigger: CAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCT...ACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp TTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAACGGTCCTGGCGGTTCGCCGTTGGTaGAGCGCACGTCGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: LQPRSTYVIRQVSPKTVLAVRRW*SARRRC
Trigger: ACACCTCCGACGTGCGCTGCACCAACGGCGAACCGC...CAGGACCGTTTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp AGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTGAGTTCCCGCCCAGATaGCCGGACAATGGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: SEPRYDIRWQSAKVLTNCEFPPR*PDNGRV
Trigger: GACACGCCCATTGTCCGGGCATCTGGGCGGGAACTC...ACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp AGGTCGCTTGGATCCTCTAACACTGGTCTCCCGGCCGGGGAAGCTCCTCCGGTGTGTAGCAAAGAAAGATaGCCGTCAAAAGAACATAGC +
Preference number: 4 (lower is better)
Translates to: RSLGSSNTGLPAGEAPPVCSKER*PSKEHS
Trigger: GCTATGTTCTTTTGACGGGCATCTTTCTTTGCTACA...CACCGGAGGAGCTTCCCCGGCCGGGAGACCAGTGTTAGAGGATCCAAGCGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAATGGAGGGAACGGTGGTaGGCTCGCCGAGGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: NGVADPCHVFLSVGSAQEWRERW*ARRGPG
Trigger: GCCCGGACCTCGGCGAGCCCACCACCGTTCCCTCCA...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTTGGAGGGAACGGTGGTaGGCTCGCCGAGGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: LSQSSLCKLRSSEVTLIPWRERW*ARRGPG
Trigger: GCCCGGACCTCGGCGAGCCCACCACCGTTCCCTCCA...AGGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp ATGAAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCGCTGGAGGGAACGGTaGTGGGCTCGCCGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: MKTRHSKTNSEPRYDIRWRWRER*WARRGP
Trigger: CGGACCTCGGCGAGCCCACCACCGTTCCCTCCAGCG...CCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTCGCTGGAGGGAACGGTaGTGGGCTCGCCGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: SVAVALLTENGVADPCHVRWRER*WARRGP
Trigger: CGGACCTCGGCGAGCCCACCACCGTTCCCTCCAGCG...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTTCCTAAAGTCCTTATCACACTGATCAGTCAAAGGGGGCATGAACAAAACCTCCGCTGGAGGGAACGGTaGTGGGCTCGCCGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: FPKVLITLISQRGHEQNLRWRER*WARRGP
Trigger: CGGACCTCGGCGAGCCCACCACCGTTCCCTCCAGCG...GAGGTTTTGTTCATGCCCCCTTTGACTGATCAGTGTGATAAGGACTTTAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAACGCAGGGCACTCCGCTaGGACCCTTGGCGTGCACGG +
Preference number: 4 (lower is better)
Translates to: NGVADPCHVFLSVGSAQERRALR*DPWRAR
Trigger: CCGTGCACGCCAAGGGTCCCAGCGGAGTGCCCTGCG...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACCGCAGGGCACTCCGCTaGGACCCTTGGCGTGCACGG +
Preference number: 4 (lower is better)
Translates to: FGNVISILFVQAEVLRGYRRALR*DPWRAR
Trigger: CCGTGCACGCCAAGGGTCCCAGCGGAGTGCCCTGCG...GTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTTCCTAAAGTCCTTATCACACTGATCAGTCAAAGGGGGCATGAACAAAACCTCCCGGCGGTTCGCCGTTaGTGCAGCGCACGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: FPKVLITLISQRGHEQNLPAVRR*CSARRR
Trigger: CCTCCGACGTGCGCTGCACCAACGGCGAACCGCCGG...GAGGTTTTGTTCATGCCCCCTTTGACTGATCAGTGTGATAAGGACTTTAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTACCGGCGGTTCGCCGTTaGTGCAGCGCACGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: AVALLTENGVADPCHVFLPAVRR*CSARRR
Trigger: CCTCCGACGTGCGCTGCACCAACGGCGAACCGCCGG...TAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp ATGAAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCCGGCGGTTCGCCGTTaGTGCAGCGCACGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: MKTRHSKTNSEPRYDIRWPAVRR*CSARRR
Trigger: CCTCCGACGTGCGCTGCACCAACGGCGAACCGCCGG...CCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp ACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACACGACGGCCCTGGAGTTaGGGGTGTCCAGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: TNSEPRYDIRWQSAKVLTRRPWS*GCPGAV
Trigger: AACAGCTCCTGGACACCCCCAACTCCAGGGCCGTCG...TGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp CCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTCAGATGCCCGGACAATaGGCGTGTCATTGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: PLVGKVHNCSRVGSADVSQMPGQ*ACHCSG
Trigger: TCCGCTACAATGACACGCCCATTGTCCGGGCATCTG...ACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp AGTCCACCTGCCTCTTTGGAAATCTGCGTGAAGGACTCCACACCTTTCTCTCCAGCCGAGGATTTGGCTTaGGGTCTGCGTCAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: SPPASLEICVKDSTPFSPAEDLA*GLRQGD
Trigger: ATCTCCCTGACGCAGACCCCAAGCCAAATCCTCGGC...TGGAGAGAAAGGTGTGGAGTCCTTCACGCAGATTTCCAAAGAGGCAGGTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR TCA 90 bp TGTCTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCAATGCAGAGTCCACCTGCTTTGGAAATCTGCGTaGAGGACTCCACACCTTTCT +
Preference number: 4 (lower is better)
Translates to: CLCVPGGFSRTGQCRVHLLWKSA*RTPHLS
Trigger: AGAAAGGTGTGGAGTCCTTCACGCAGATTTCCAAAG...CAGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR GCA 90 bp GGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTGACTTATTATCGATCCGGATTGAGTaGGGGGCGTACATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GKVHNCSRVGSADVSDLLSIRIE*GAYISW
Trigger: CCAGGAGATGTACGCCCCGCACTCAATCCGGATCGA...TAATAAGTCACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp GTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCGCGGTTCGCCGTTGGTaGAGCGCACGTCGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: VISILFVQAEVLRGYFDSAVRRW*SARRRC
Trigger: ACACCTCCGACGTGCGCTGCACCAACGGCGAACCGC...GGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTAGGTCACGGACTGGGCAATaGAGAGTCCACCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: VHSKEPGRDLSFNTPFGRSRTGQ*RVHLPL
Trigger: AAGAGGCAGGTGGACTCTGCATTGCCCAGTCCGTGA...CCTACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp CTGGGGGATTCTCACGGACTGGGCAATGCAGAGTCCACCTGCCTCTTTGGAAATCAATGGTCCTGTCTTTaGGTTCCTGGGGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: LGDSHGLGNAESTCLFGNQWSCL*VPGGFS
Trigger: TGAGAATCCCCCAGGAACGCAAAGACAGGACCATTG...ATTTCCAAAGAGGCAGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR GCA 90 bp TTGCGTTCCTGGGGGATTCTCACGGACTGGGCAATGCAGAGTCCACCTGCCTCTGCTGCTGCAAGGATCTaGTTTATATCCTCATCGTTG +
Preference number: 4 (lower is better)
Translates to: LRSWGILTDWAMQSPPASAAARI*FISSSL
Trigger: CAACGATGAGGATATAAAGCAGATCCTTGCAGCAGC...AGAGGCAGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR GCA 90 bp GGCCGGGGAAGCTCCTCCGGTGATGGGAAGCGGGTAGGACCAAAGAGTCCTATGTGTAGCAAAGAAAGATaGCCGTCAAAAGAACATAGC +
Preference number: 4 (lower is better)
Translates to: GRGSSSGDGKRVGPKSPMCSKER*PSKEHS
Trigger: GCTATGTTCTTTTGACGGGCATCTTTCTTTGCTACA...CATAGGACTCTTTGGTCCTACCCGCTTCCCATCACCGGAGGAGCTTCCCCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp GTGGTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTGGGAAGGTCCACAATTaGAGCCGAGTTGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: VVHSKEPGRDLSFNTPFGGKVHN*SRVGSA
Trigger: AGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCC...ACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp AGAAAATGGCCAACTTGGTCAGCTCTTTTGGCTGCTGCAAGGATCTGCTTTATACTTCACGCACCCCTCTaGCTCCCAACGGGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: RKWPTWSALLAAARICFILHAPL*LPTGAF
Trigger: GAAGGCGCCCGTTGGGAGGCAGAGGGGTGCGTGAAG...TATAAAGCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR GCA 90 bp AATGGCCAACTTGGTCAGCTCTTTTGGCTGCTGCAAGGATCTGCTTTATATCCTAGGGCATCTCCCCAGTaGAGCTCAGGAGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: NGQLGQLFWLLQGSALYPRASPQ*SSGAMG
Trigger: CCCCATGGCTCCTGAGCTGCACTGGGGAGATGCCCT...AGGATATAAAGCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAGTTGGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CCA 90 bp CCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAATCTGGAGGGAACGGTGGTaGGCTCGCCGAGGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: PKCWVSSRRTSFGNVISIWRERW*ARRGPG
Trigger: GCCCGGACCTCGGCGAGCCCACCACCGTTCCCTCCA...GATTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp AATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATCGCTGGAGGGAACGGTaGTGGGCTCGCCGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: NVISILFVQAEVLRGYFDRWRER*WARRGP
Trigger: CGGACCTCGGCGAGCCCACCACCGTTCCCTCCAGCG...ATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTGGCGGCGGCGGCGCTaGAGGGAACGGTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CFPKCWVSSRRTSFGNVIWRRRR*RERWWA
Trigger: AGCCCACCACCGTTCCCTCCAGCGCCGCCGCCGCCA...GATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAACTCCGCTGGGACCCTTaGCGTGCACGGGGAACAGCC +
Preference number: 4 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQLRWDP*RARGTA
Trigger: GGCTGTTCCCCGTGCACGCCAAGGGTCCCAGCGGAG...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTCCGCTGGGACCCTTaGCGTGCACGGGGAACAGCC +
Preference number: 4 (lower is better)
Translates to: VAVALLTENGVADPCHVFLRWDP*RARGTA
Trigger: GGCTGTTCCCCGTGCACGCCAAGGGTCCCAGCGGAG...GAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp ATGAAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCTCCGCTGGGACCCTTaGCGTGCACGGGGAACAGCC +
Preference number: 4 (lower is better)
Translates to: MKTRHSKTNSEPRYDIRWLRWDP*RARGTA
Trigger: GGCTGTTCCCCGTGCACGCCAAGGGTCCCAGCGGAG...CCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp AATATTCCACCGTCTGAGAGAATAGGGCTCTATGAAAACAAGGCATTCGAAAACCGCAGGGCACTCCGCTaGGACCCTTGGCGTGCACGG +
Preference number: 4 (lower is better)
Translates to: NIPPSERIGLYENKAFENRRALR*DPWRAR
Trigger: CCGTGCACGCCAAGGGTCCCAGCGGAGTGCCCTGCG...GTTTTCGAATGCCTTGTTTTCATAGAGCCCTATTCTCTCAGACGGTGGAATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TCAAAGTCAATGGTCCTGTCTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCAATGTCTACCATGGCCTaGGCTTGGAAGGAATCGGGT +
Preference number: 4 (lower is better)
Translates to: SKSMVLSLRSWGILTDWAMSTMA*AWKESG
Trigger: ACCCGATTCCTTCCAAGCCCAGGCCATGGTAGACAT...TGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CCA 90 bp TTGCGTTCCTGGGGGATTCTCACGGACTGGGCAATGCAGAGTCCACCTGCCTCTTTATATCCTCATCGTTaGCAAAAATCACGACGGCCC +
Preference number: 4 (lower is better)
Translates to: LRSWGILTDWAMQSPPASLYPHR*QKSRRP
Trigger: GGGCCGTCGTGATTTTTGCCAACGATGAGGATATAA...AGAGGCAGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CCA 90 bp GGGCTGAATGGTGATGGCCCCTTCTGCGATATCTTCATGCTGGTGCAGTGGGTTCTTGGTCAGCTCTTTTaGCTGCTGCAAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: GLNGDGPFCDIFMLVQWVLGQLF*LLQGSA
Trigger: AGCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAG...AACCCACTGCACCAGCATGAAGATATCGCAGAAGGGGCCATCACCATTCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CCA 90 bp AGGTCGCTTGGATCCTCTAACACTGGTCTCCCGGCCGGGGAAGCTCCTCCGGTGACATTGAGTTCAGGGTaGAAAATGATGATGTACACT +
Preference number: 4 (lower is better)
Translates to: RSLGSSNTGLPAGEAPPVTLSSG*KMMMYT
Trigger: AGTGTACATCATCATTTTCCACCCTGAACTCAATGT...CACCGGAGGAGCTTCCCCGGCCGGGAGACCAGTGTTAGAGGATCCAAGCGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GGCCGGGGAAGCTCCTCCGGTGATGGGAAGCGGGTAGGACCAAAGAGTCCTATGTGGTATACAGTTGTTTaGGTCTACGTTTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: GRGSSSGDGKRVGPKSPMWYTVV*VYVFTE
Trigger: CTCTGTGAAAACGTAGACCCAAACAACTGTATACCA...CATAGGACTCTTTGGTCCTACCCGCTTCCCATCACCGGAGGAGCTTCCCCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486284.5
3UTR CAA 72 bp TGGGAAGCGGGTAGGACCAAAGAGTCCTATGCCAGGTaGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: WEAGRTKESYAR*GDKITEGLPPP
Trigger: TGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATAGGACTCTTTGGTCCTACCCGCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR CAA 72 bp CTCTCAGTGGTCCATTCTAAAGAGCCAGGGCGGGACTaGAGTTTCAACACTCCCTTTGGTAGGGAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LSVVHSKEPGRD*SFNTPFGREGP
Trigger: TGGACCTTCCCTACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGACCACTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp TCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCGTGGCTCGCTTGGGCTaGATGGTGATGGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SKTNSEPRYDIRWQSAKVVARLG*MVMAPS
Trigger: AGAAGGGGCCATCACCATTCAGCCCAAGCGAGCCAC...GACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp GTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTAGGAGAGGGCTGCATAACTaGTGCACATACCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: VHSKEPGRDLSFNTPFGRRGLHN*CTYPSP
Trigger: TGGGCTTGGGTATGTGCATCAGTTATGCAGCCCTCT...CCTACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp CCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTGTGATGTTGGGCTTATaGGTCTGGGAGCTGTTACTG +
Preference number: 4 (lower is better)
Translates to: PLVGKVHNCSRVGSADVSVMLGL*VWELLL
Trigger: CAGTAACAGCTCCCAGACTCATAAGCCCAACATCAC...ACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp CTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCCAGTCAAAGGGGGCATaGACAAAACCTCAAGACATG +
Preference number: 4 (lower is better)
Translates to: LPLVGKVHNCSRVGSADVQSKGA*TKPQDM
Trigger: CATGTCTTGAGGTTTTGTTCATGCCCCCTTTGACTG...GACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp CTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAAGTCCTTATCACACTaGTCAGTCAAAGGGGGCATG +
Preference number: 4 (lower is better)
Translates to: LPLVGKVHNCSRVGSADVKSLSH*SVKGGM
Trigger: CATGCCCCCTTTGACTGATCAGTGTGATAAGGACTT...GACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATTCGCGCTCACCGGCTTaGTGCTCGCTCTCTCCAACA +
Preference number: 4 (lower is better)
Translates to: QCRWSVAVALLTENGVADSRSPA*CSLSPT
Trigger: TGTTGGAGAGAGCGAGCAGCAAGCCGGTGAGCGCGA...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467425.5
CDS-3UTR GCA 90 bp TTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAACGGTCCTGTCGCGCTCACCGGCTTaGTGCTCGCTCTCTCCAACA +
Preference number: 4 (lower is better)
Translates to: LQPRSTYVIRQVSPKTVLSRSPA*CSLSPT
Trigger: TGTTGGAGAGAGCGAGCAGCAAGCCGGTGAGCGCGA...CAGGACCGTTTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp GTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTATCGATCCGGATTGAGTaGGGGGCGTACATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VNRGTTSDGKVQRSSQTVSIRIE*GAYISW
Trigger: CCAGGAGATGTACGCCCCGCACTCAATCCGGATCGA...TACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp GATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGCGGTTCGCCGTTGGTaGAGCGCACGTCGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: DPCHVFLSVGSAQEEQALAVRRW*SARRRC
Trigger: ACACCTCCGACGTGCGCTGCACCAACGGCGAACCGC...CAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp ACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTGCGGTTCGCCGTTGGTaGAGCGCACGTCGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: TENGVADPCHVFLSVGSAAVRRW*SARRRC
Trigger: ACACCTCCGACGTGCGCTGCACCAACGGCGAACCGC...AGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTAGGGGTGATGGCCCCTTCTaGGATATCTTCATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VHSKEPGRDLSFNTPFGRGDGPF*DIFMLV
Trigger: CACCAGCATGAAGATATCGCAGAAGGGGCCATCACC...CCTACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp TGGGAAGCGGGTAGGACCAAAGAGTCCTATGCCAGGTTGGGTGACAAAATAACTGACGGTAACCCGGGTTaGTGGTGTTTGTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: WEAGRTKESYARLGDKITDGNPG*WCLWSG
Trigger: ACCAGACCACAAACACCAGCAACCCGGGTTACCGTC...AGTTATTTTGTCACCCAACCTGGCATAGGACTCTTTGGTCCTACCCGCTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp AGCTTTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTGAGTTCCCGCCCAGATaGCCGGACAATGGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: SFGNVISILFVQAEVLRGEFPPR*PDNGRV
Trigger: GACACGCCCATTGTCCGGGCATCTGGGCGGGAACTC...ACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp TCCTATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCACAGAGCTCGGTCTTTaGCTCACCGTTGGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: SYARLGDKITEGLPPPWFTELGL*LTVGSV
Trigger: GACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGT...GAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp AAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCAGCAGCTTCCTCAGCTaGACCATGCTGCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: KTNSEPRYDIRWQSAKVLSSFLS*TMLLRL
Trigger: CAGCCGGAGCAGCATGGTCCAGCTGAGGAAGCTGCT...GAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATCGCAGGGCACTCCGCTaGGACCCTTGGCGTGCACGG +
Preference number: 4 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNRRALR*DPWRAR
Trigger: CCGTGCACGCCAAGGGTCCCAGCGGAGTGCCCTGCG...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GACTTGAGTTTCAACACTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTCGGAGGTGTCCTTCTaGATGAGCGCCTGGACGAAA +
Preference number: 4 (lower is better)
Translates to: DLSFNTPFGREGPQLQPSSEVSF*MSAWTK
Trigger: TTTCGTCCAGGCGCTCATCCAGAAGGACACCTCCGA...ACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAGTGTTGAAACTCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCACCGGCGGTTCGCCGTTaGTGCAGCGCACGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: FPKCWVSSRRTSFGNVISPAVRR*CSARRR
Trigger: CCTCCGACGTGCGCTGCACCAACGGCGAACCGCCGG...TGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GACTTGAGTTTCAACACTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTCTGTCTTTGCGTTCCTaGGGGATTCTCACGGACTGG +
Preference number: 4 (lower is better)
Translates to: DLSFNTPFGREGPQLQPSLSLRS*GILTDW
Trigger: CCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAG...ACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAGTGTTGAAACTCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCCATAAATCACGACGGCCCTaGAGTTGGGGGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: YARLGDKITEGLPPPWFHKSRRP*SWGCPG
Trigger: TCCTGGACACCCCCAACTCCAGGGCCGTCGTGATTT...ATGGAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp CCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTGGTCTTCCTCCTCCATaGTTCCATGGAATGGAACAG +
Preference number: 4 (lower is better)
Translates to: PLVGKVHNCSRVGSADVSGLPPP*FHGMEQ
Trigger: CTGTTCCATTCCATGGAACCATGGAGGAGGAAGACC...ACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp ACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCCCCTCGATCCGGATTaGGTGCGGGGCGTACATCTC +
Preference number: 4 (lower is better)
Translates to: TENGVADPCHVFLSVGSAPLDPD*VRGVHL
Trigger: GAGATGTACGCCCCGCACTCAATCCGGATCGAGGGG...AGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp GTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCCCCTCGATCCGGATTaGGTGCGGGGCGTACATCTC +
Preference number: 4 (lower is better)
Translates to: VAVALLTENGVADPCHVFPLDPD*VRGVHL
Trigger: GAGATGTACGCCCCGCACTCAATCCGGATCGAGGGG...GAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp GGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAATCCCGTTTTCCCTCTTaGTGTCGCCGCAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: GVADPCHVFLSVGSAQEESRFPS*CRRRAL
Trigger: GAGTGCCCTGCGGCGACATCAAGAGGGAAAACGGGA...TTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp ACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAGGTTGGGATCACTGTTaGTCTGGTCCAGGGCGTAGA +
Preference number: 4 (lower is better)
Translates to: TNSEPRYDIRWQSAKVLTGWDHC*SGPGRR
Trigger: TCTACGCCCTGGACCAGATCAACAGTGATCCCAACC...TGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp ATGAAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCGCTCACCGGCTTGCTaGTCGCTCTCTCCAACAGCC +
Preference number: 4 (lower is better)
Translates to: MKTRHSKTNSEPRYDIRWRSPAC*SLSPTA
Trigger: GGCTGTTGGAGAGAGCGAGCAGCAAGCCGGTGAGCG...CCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp CCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTAATGCAGAGTCCACCTaGCTCTTTGGAAATCTGCGT +
Preference number: 4 (lower is better)
Translates to: PLVGKVHNCSRVGSADVSNAEST*LFGNLR
Trigger: ACGCAGATTTCCAAAGAGGCAGGTGGACTCTGCATT...ACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp AAGTCAATGGTCCTGTCTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCAATGAATGCAGAGTCCACCTaGCTCTTTGGAAATCTGCGT +
Preference number: 4 (lower is better)
Translates to: KSMVLSLRSWGILTDWAMNAEST*LFGNLR
Trigger: ACGCAGATTTCCAAAGAGGCAGGTGGACTCTGCATT...CATTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR GCA 90 bp AGGTCAGCCCCAAAACGGTCCTGTGGCTCTCAGTGGTCCATTCTAAAGAGCCAGGCTGCTGCAAGGATCTaGTTTATATCCTCATCGTTG +
Preference number: 4 (lower is better)
Translates to: RSAPKRSCGSQWSILKSQAAARI*FISSSL
Trigger: CAACGATGAGGATATAAAGCAGATCCTTGCAGCAGC...CTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGACCGTTTTGGGGCTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp TGGGAAGCGGGTAGGACCAAAGAGTCCTATGCCAGGTTGGGTGACAAAATAACTGGTGATGGCCCCTTCTaGGATATCTTCATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: WEAGRTKESYARLGDKITGDGPF*DIFMLV
Trigger: CACCAGCATGAAGATATCGCAGAAGGGGCCATCACC...AGTTATTTTGTCACCCAACCTGGCATAGGACTCTTTGGTCCTACCCGCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp GACTTGAGTTTCAACACTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTTCTTGCCTCCAGCTTaGTCCATCTCTGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: DLSFNTPFGREGPQLQPSFLPPA*SISGQT
Trigger: TGTCTGCCCAGAGATGGAGCAAGCTGGAGGCAAGAA...ACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAGTGTTGAAACTCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp CTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAATGATCCCCAACATTaGCAGGAAGACAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: LPLVGKVHNCSRVGSADVNDPQH*QEDRNH
Trigger: GTGATTCCTGTCTTCCTGGCAATGTTGGGGATCATT...GACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTGAGTTCCCGCCCAGATaGCCGGACAATGGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: SVAVALLTENGVADPCHVEFPPR*PDNGRV
Trigger: GACACGCCCATTGTCCGGGCATCTGGGCGGGAACTC...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp CAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAGGGAAGGTCCACAATTaGAGCCGAGTTGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: QTVNRGTTSDGKVQRSSQGKVHN*SRVGSA
Trigger: AGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCC...TTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAAAGCAGCTTCCTCAGCTaGACCATGCTGCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GVADPCHVFLSVGSAQEESSFLS*TMLLRL
Trigger: CAGCCGGAGCAGCATGGTCCAGCTGAGGAAGCTGCT...TTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTACTCCGCTGGGACCCTTaGCGTGCACGGGGAACAGCC +
Preference number: 4 (lower is better)
Translates to: HVFLSVGSAQEEQALEMLLRWDP*RARGTA
Trigger: GGCTGTTCCCCGTGCACGCCAAGGGTCCCAGCGGAG...TAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp ACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAGGGATTCTCACGGACTaGGCAATGCAGAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: TNSEPRYDIRWQSAKVLTGILTD*AMQSPP
Trigger: AGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCC...TGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp AAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAACGACGGCCCTGGAGTTaGGGGTGTCCAGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: KTRHSKTNSEPRYDIRWQRRPWS*GCPGAV
Trigger: AACAGCTCCTGGACACCCCCAACTCCAGGGCCGTCG...TTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp ACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCGACGGCCCTGGAGTTaGGGGTGTCCAGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: TENGVADPCHVFLSVGSARRPWS*GCPGAV
Trigger: AACAGCTCCTGGACACCCCCAACTCCAGGGCCGTCG...AGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp AAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCAAGCTTGCTCCATCTCTaGGCAGACACCCCGGTAGTC +
Preference number: 4 (lower is better)
Translates to: KQTVNRGTTSDGKVQRSSSLLHL*ADTPVV
Trigger: GACTACCGGGGTGTCTGCCCAGAGATGGAGCAAGCT...TGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp AAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCAGCTTGCTCCATCTCTaGGCAGACACCCCGGTAGTC +
Preference number: 4 (lower is better)
Translates to: KTNSEPRYDIRWQSAKVLSLLHL*ADTPVV
Trigger: GACTACCGGGGTGTCTGCCCAGAGATGGAGCAAGCT...GAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTAGGGGTCTTCCTCCTCCATaGTTCCATGGAATGGAACAG +
Preference number: 4 (lower is better)
Translates to: VHSKEPGRDLSFNTPFGRGLPPP*FHGMEQ
Trigger: CTGTTCCATTCCATGGAACCATGGAGGAGGAAGACC...CCTACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp AATATTCCACCGTCTGAGAGAATAGGGCTCTATGAAAACAAGGCATTCGAAAACCCCCTCGATCCGGATTaGGTGCGGGGCGTACATCTC +
Preference number: 4 (lower is better)
Translates to: NIPPSERIGLYENKAFENPLDPD*VRGVHL
Trigger: GAGATGTACGCCCCGCACTCAATCCGGATCGAGGGG...GTTTTCGAATGCCTTGTTTTCATAGAGCCCTATTCTCTCAGACGGTGGAATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTCCCCTCGATCCGGATTaGGTGCGGGGCGTACATCTC +
Preference number: 4 (lower is better)
Translates to: VALLTENGVADPCHVFLSPLDPD*VRGVHL
Trigger: GAGATGTACGCCCCGCACTCAATCCGGATCGAGGGG...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp TTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTCCCGTTTTCCCTCTTaGTGTCGCCGCAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: LEMLSQSSLCKLRSSEVTSRFPS*CRRRAL
Trigger: GAGTGCCCTGCGGCGACATCAAGAGGGAAAACGGGA...AGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAATCCCGTTTTCCCTCTTaGTGTCGCCGCAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: NGVADPCHVFLSVGSAQESRFPS*CRRRAL
Trigger: GAGTGCCCTGCGGCGACATCAAGAGGGAAAACGGGA...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp AAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCGCTTGGGCTGAATGGTaGTGGCCCCTTCTGCGATAT +
Preference number: 4 (lower is better)
Translates to: KTNSEPRYDIRWQSAKVLAWAEW*WPLLRY
Trigger: ATATCGCAGAAGGGGCCATCACCATTCAGCCCAAGC...GAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp ACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTGTGGCTCGCTTGGGCTaGATGGTGATGGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: TENGVADPCHVFLSVGSAVARLG*MVMAPS
Trigger: AGAAGGGGCCATCACCATTCAGCCCAAGCGAGCCAC...AGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp AGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTAGAGGGCTGCATAACTaGTGCACATACCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: SEPRYDIRWQSAKVLTNCRGLHN*CTYPSP
Trigger: TGGGCTTGGGTATGTGCATCAGTTATGCAGCCCTCT...ACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp CCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTCAACACCAAACCAAATaGACACCCCTAGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PLVGKVHNCSRVGSADVSQHQTK*TPLEAE
Trigger: TTCAGCTTCTAGGGGTGTTCATTTGGTTTGGTGTTG...ACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp TTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAACGGTCCTGTCACGGACTGGGCAATaGAGAGTCCACCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LQPRSTYVIRQVSPKTVLSRTGQ*RVHLPL
Trigger: AAGAGGCAGGTGGACTCTGCATTGCCCAGTCCGTGA...CAGGACCGTTTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp TCAAAGTCAATGGTCCTGTCTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCAGTCAGCTCTTTTGGCTaGTGCAAGGATCTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: SKSMVLSLRSWGILTDWAVSSFG*CKDLLY
Trigger: ATAAAGCAGATCCTTGCAGCAGCCAAAAGAGCTGAC...TGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR GCA 90 bp CAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAATTCTTGCCTCCAGCTTaGTCCATCTCTGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: QTVNRGTTSDGKVQRSSQFLPPA*SISGQT
Trigger: TGTCTGCCCAGAGATGGAGCAAGCTGGAGGCAAGAA...TTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATGACGGTAACCCGGGTTaGTGGTGTTTGTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: QCRWSVAVALLTENGVADDGNPG*WCLWSG
Trigger: ACCAGACCACAAACACCAGCAACCCGGGTTACCGTC...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp CCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAATCGAGTTCCCGCCCAGATaGCCGGACAATGGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: PKCWVSSRRTSFGNVISIEFPPR*PDNGRV
Trigger: GACACGCCCATTGTCCGGGCATCTGGGCGGGAACTC...GATTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp TTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAACGGTCCTGACAGAGCTCGGTCTTTaGCTCACCGTTGGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LQPRSTYVIRQVSPKTVLTELGL*LTVGSV
Trigger: GACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGT...CAGGACCGTTTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp TGTTTGATAATTCTATCAAAGTCAATGGTCCTGTCTTTGCGTTCCTGGGGGATTCAACGGGCGCCTTCATaGCTCGCTCCGGGAATCGTC +
Preference number: 4 (lower is better)
Translates to: CLIILSKSMVLSLRSWGIQRAPS*LAPGIV
Trigger: GACGATTCCCGGAGCGAGGCATGAAGGCGCCCGTTG...AATCCCCCAGGAACGCAAAGACAGGACCATTGACTTTGATAGAATTATCAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CCA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAAGCAGCTTCCTCAGCTaGACCATGCTGCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: PCHVFLSVGSAQEEQALESSFLS*TMLLRL
Trigger: CAGCCGGAGCAGCATGGTCCAGCTGAGGAAGCTGCT...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp ACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAATCGCTTCCAGCCTGTaGATCCCGTTTTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: TNSEPRYDIRWQSAKVLTIASSL*IPFSLL
Trigger: CAAGAGGGAAAACGGGATCCACAGGCTGGAAGCGAT...TGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp ATGAAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCGCCCAGCGTCACGTTaGGCAGTAGGTTGGGATCAC +
Preference number: 4 (lower is better)
Translates to: MKTRHSKTNSEPRYDIRWRPASR*AVGWDH
Trigger: GTGATCCCAACCTACTGCCCAACGTGACGCTGGGCG...CCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp ACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCGCCCAGCGTCACGTTaGGCAGTAGGTTGGGATCAC +
Preference number: 4 (lower is better)
Translates to: TENGVADPCHVFLSVGSARPASR*AVGWDH
Trigger: GTGATCCCAACCTACTGCCCAACGTGACGCTGGGCG...AGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTCGCCCAGCGTCACGTTaGGCAGTAGGTTGGGATCAC +
Preference number: 4 (lower is better)
Translates to: GNVISILFVQAEVLRGYFRPASR*AVGWDH
Trigger: GTGATCCCAACCTACTGCCCAACGTGACGCTGGGCG...AAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TATTTCATAAAGCAGCTGTTTAGGTCGCTTGGATCCTCTAACACTGGTCTCCCGTCGGAGGTGTCCTTCTaGATGAGCGCCTGGACGAAA +
Preference number: 4 (lower is better)
Translates to: YFIKQLFRSLGSSNTGLPSEVSF*MSAWTK
Trigger: TTTCGTCCAGGCGCTCATCCAGAAGGACACCTCCGA...CGGGAGACCAGTGTTAGAGGATCCAAGCGACCTAAACAGCTGCTTTATGAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp CAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAATGTCTACCATGGCCTaGGCTTGGAAGGAATCGGGT +
Preference number: 4 (lower is better)
Translates to: QTVNRGTTSDGKVQRSSQMSTMA*AWKESG
Trigger: ACCCGATTCCTTCCAAGCCCAGGCCATGGTAGACAT...TTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATGGGATTCTCACGGACTaGGCAATGCAGAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: QCRWSVAVALLTENGVADGILTD*AMQSPP
Trigger: AGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCC...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTCCACCGTGGCTCGCTTGGGCTGAATGGTGATGGCCCCTTCTGCGATATCTTCTTCTATCAAAGTCAATaGTCCTGTCTTTGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: FHRGSLGLNGDGPFCDIFFYQSQ*SCLCVP
Trigger: AGGAACGCAAAGACAGGACCATTGACTTTGATAGAA...GAAGATATCGCAGAAGGGGCCATCACCATTCAGCCCAAGCGAGCCACGGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CCA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTCGACGGCCCTGGAGTTaGGGGTGTCCAGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: VALLTENGVADPCHVFLSRRPWS*GCPGAV
Trigger: AACAGCTCCTGGACACCCCCAACTCCAGGGCCGTCG...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TGGGAAGCGGGTAGGACCAAAGAGTCCTATGCCAGGTTGGGTGACAAAATAACTCTTGGTCAGCTCTTTTaGCTGCTGCAAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: WEAGRTKESYARLGDKITLGQLF*LLQGSA
Trigger: AGCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAG...AGTTATTTTGTCACCCAACCTGGCATAGGACTCTTTGGTCCTACCCGCTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TCCTATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCCTTGGTCAGCTCTTTTaGCTGCTGCAAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SYARLGDKITEGLPPPWFLGQLF*LLQGSA
Trigger: AGCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAG...GAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp ATCAAAGTCAATGGTCCTGTCTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCAGAAAATGGCCAACTTaGTCAGCTCTTTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: IKVNGPVFAFLGDSHGLGRKWPT*SALLAA
Trigger: AGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCT...GCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTTTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CCA 90 bp TCAAAGTCAATGGTCCTGTCTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCATTCATGCTGGTGCAGTaGGTTTATTTTGGATCCCCA +
Preference number: 4 (lower is better)
Translates to: SKSMVLSLRSWGILTDWAFMLVQ*VYFGSP
Trigger: TGGGGATCCAAAATAAACCCACTGCACCAGCATGAA...TGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CCA 90 bp GCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTCAAACCCTTCCACCGTaGCTCGCTTGGGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: ADPCHVFLSVGSAQEEQAQTLPP*LAWAEW
Trigger: CCATTCAGCCCAAGCGAGCCACGGTGGAAGGGTTTG...AGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCAGATGCCCGGACAATaGGCGTGTCATTGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: SKTNSEPRYDIRWQSAKVQMPGQ*ACHCSG
Trigger: TCCGCTACAATGACACGCCCATTGTCCGGGCATCTG...GACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTGACTTATTACTTCGCTTCCGTTTCTaGACATTGAGTTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GKVHNCSRVGSADVSDLLLRFRF*TLSSGW
Trigger: CCACCCTGAACTCAATGTCCAGAAACGGAAGCGAAG...TAATAAGTCACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GACTTGAGTTTCAACACTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTCTTTGCCTCACCGTTaGGTCTGTCACTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: DLSFNTPFGREGPQLQPSSLPHR*VCHWVC
Trigger: ACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGA...ACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAGTGTTGAAACTCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTGACTTATTATGCAGCAGGGCTGTTTaGGTCTACGTTTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: GKVHNCSRVGSADVSDLLCSRAV*VYVFTE
Trigger: CTCTGTGAAAACGTAGACCCAAACAGCCCTGCTGCA...TAATAAGTCACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357716.9
CDS-3UTR CCA 90 bp TCCTATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCTCCTGTGGCTCTCAGTaGTCCATTCTAAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SYARLGDKITEGLPPPWFSCGSQ*SILKSQ
Trigger: CTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGA...GAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
3UTR CAA 72 bp ACGACGGCCCTGGAGTTGGGGGTGTCCAGGAGCTGTTaGATAATTCTATCAAAGTCAATGGTCCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: TTALELGVSRSC*IILSKSMVLSL
Trigger: CAAAGACAGGACCATTGACTTTGATAGAATTATCAAACAGCTCCTGGACACCCCCAACTCCAGGGCCGTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR TCA 90 bp GGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAAGGTTGGGATCACTGTTaGTCTGGTCCAGGGCGTAGA +
Preference number: 4 (lower is better)
Translates to: GVADPCHVFLSVGSAQEEGWDHC*SGPGRR
Trigger: TCTACGCCCTGGACCAGATCAACAGTGATCCCAACC...TTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp TCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGACTACTTTCTCCGGCTTaGCGAAAACCGGCGGTTCGC +
Preference number: 4 (lower is better)
Translates to: SMSCFPKCWVSSRRTSFGLLSPA*RKPAVR
Trigger: GCGAACCGCCGGTTTTCGTCAAGCCGGAGAAAGTAG...TCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp CTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCACTACTTTCTCCGGCTTaGCGAAAACCGGCGGTTCGC +
Preference number: 4 (lower is better)
Translates to: LTENGVADPCHVFLSVGSLLSPA*RKPAVR
Trigger: GCGAACCGCCGGTTTTCGTCAAGCCGGAGAAAGTAG...TGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp ATGAAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCTACTTTCTCCGGCTTaGCGAAAACCGGCGGTTCGC +
Preference number: 4 (lower is better)
Translates to: MKTRHSKTNSEPRYDIRWLLSPA*RKPAVR
Trigger: GCGAACCGCCGGTTTTCGTCAAGCCGGAGAAAGTAG...CCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTGGATGTTGGCTACCATaGTGGAGACCGAACTCCCCG +
Preference number: 4 (lower is better)
Translates to: SVAVALLTENGVADPCHVGCWLP*WRPNSP
Trigger: CGGGGAGTTCGGTCTCCATCATGGTAGCCAACATCC...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp GACTTGAGTTTCAACACTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTCTTTGGAAATCTGCGTaGAGGACTCCACACCTTTCT +
Preference number: 4 (lower is better)
Translates to: DLSFNTPFGREGPQLQPSLWKSA*RTPHLS
Trigger: AGAAAGGTGTGGAGTCCTTCACGCAGATTTCCAAAG...ACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAGTGTTGAAACTCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp CCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTTCGTCAACTTGCAGTTaGAGTTTTCCTCCCAGTATT +
Preference number: 4 (lower is better)
Translates to: PLVGKVHNCSRVGSADVSSSTCS*SFPPSI
Trigger: AATACTGGGAGGAAAACTTCAACTGCAAGTTGACGA...ACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp GTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTAGGTCTTCTATATTGAGCTaGAGTTCGTCTGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: VHSKEPGRDLSFNTPFGRSSILS*SSSVHC
Trigger: GCAGTGGACAGACGAACTTCAGCTCAATATAGAAGA...CCTACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp GCGGGTAGGACCAAAGAGTCCTATGCCAGGTTGGGTGACAAAATAACTGAGGGTGCATGTCTTCTATATTaGGCTGAAGTTCGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: AGRTKESYARLGDKITEGACLLY*AEVRLS
Trigger: GGACAGACGAACTTCAGCTCAATATAGAAGACATGC...ACCCTCAGTTATTTTGTCACCCAACCTGGCATAGGACTCTTTGGTCCTACCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp GTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTACAAAGATGGTGGCAATaGTCCCCAACATTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VNRGTTSDGKVQRSSQTVQRWWQ*SPTLPG
Trigger: TCCTGGCAATGTTGGGGATCATTGCCACCATCTTTG...TACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp TTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAACGGTCCTGTCAAAAGAACATAGCTaGGTTCCCGCCCAGATGCCC +
Preference number: 4 (lower is better)
Translates to: LQPRSTYVIRQVSPKTVLSKEHS*VPAQMP
Trigger: GGGCATCTGGGCGGGAACTCAGCTATGTTCTTTTGA...CAGGACCGTTTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATAGAGGGCTGCATAACTaGTGCACATACCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: QCRWSVAVALLTENGVADRGLHN*CTYPSP
Trigger: TGGGCTTGGGTATGTGCATCAGTTATGCAGCCCTCT...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp ACCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTGGGAAGCTCCTCCGGTaGTGGGAAGCGGGTAGGACC +
Preference number: 4 (lower is better)
Translates to: TFLLCNLSYTKDRWGILSGKLLR*WEAGRT
Trigger: GGTCCTACCCGCTTCCCATCACCGGAGGAGCTTCCC...AGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp TCCTATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCCAGTCAAAGGGGGCATaGACAAAACCTCAAGACATG +
Preference number: 4 (lower is better)
Translates to: SYARLGDKITEGLPPPWFQSKGA*TKPQDM
Trigger: CATGTCTTGAGGTTTTGTTCATGCCCCCTTTGACTG...GAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp TTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAACGCTCACCGGCTTGCTaGTCGCTCTCTCCAACAGCC +
Preference number: 4 (lower is better)
Translates to: FLSVGSAQEEQALEMLSQRSPAC*SLSPTA
Trigger: GGCTGTTGGAGAGAGCGAGCAGCAAGCCGGTGAGCG...TTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467425.5
CDS-3UTR GCA 90 bp TCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGATCGATCCGGATTGAGTaGGGGGCGTACATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SMSCFPKCWVSSRRTSFGSIRIE*GAYISW
Trigger: CCAGGAGATGTACGCCCCGCACTCAATCCGGATCGA...TCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp TTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTCGATCCGGATTGAGTaGGGGGCGTACATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LEMLSQSSLCKLRSSEVTSIRIE*GAYISW
Trigger: CCAGGAGATGTACGCCCCGCACTCAATCCGGATCGA...AGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCTCGATCCGGATTGAGTaGGGGGCGTACATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VAVALLTENGVADPCHVFSIRIE*GAYISW
Trigger: CCAGGAGATGTACGCCCCGCACTCAATCCGGATCGA...GAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp CTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCATAACTTCCTTCCGATaGGAGGGTAGACACATAATT +
Preference number: 4 (lower is better)
Translates to: LPLVGKVHNCSRVGSADVITSFR*EGRHII
Trigger: AATTATGTGTCTACCCTCGCATCGGAAGGAAGTTAT...GACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp AAAGAAAATGGCCAACTTGGTCAGCTCTTTTGGCTGCTGCAAGGATCTGCTTTATCACGGACTGGGCAATaGAGAGTCCACCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: KENGQLGQLFWLLQGSALSRTGQ*RVHLPL
Trigger: AAGAGGCAGGTGGACTCTGCATTGCCCAGTCCGTGA...TAAAGCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR GCA 90 bp CAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAGCTTACATGGTAGTGTaGACACTGAGGCGGGTATCT +
Preference number: 4 (lower is better)
Translates to: QTVNRGTTSDGKVQRSSQAYMVV*TLRRVS
Trigger: AGATACCCGCCTCAGTGTGCACACTACCATGTAAGC...TTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp GCGGGTAGGACCAAAGAGTCCTATGCCAGGTTGGGTGACAAAATAACTGAGGGTTTTCGTCAAGAGGGCTaGATAACTGATGCACATACC +
Preference number: 4 (lower is better)
Translates to: AGRTKESYARLGDKITEGFRQEG*ITDAHT
Trigger: GGTATGTGCATCAGTTATGCAGCCCTCTTGACGAAA...ACCCTCAGTTATTTTGTCACCCAACCTGGCATAGGACTCTTTGGTCCTACCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp GCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTACAGAGCTCGGTCTTTaGCTCACCGTTGGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: ADPCHVFLSVGSAQEEQATELGL*LTVGSV
Trigger: GACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGT...AGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GTGGTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTCATCAGATGGCAAAGTaGAAAGGTCCTCACAAACTG +
Preference number: 4 (lower is better)
Translates to: VVHSKEPGRDLSFNTPFGHQMAK*KGPHKL
Trigger: CAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATG...ACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTCGGAGGTGTCCTTCTaGATGAGCGCCTGGACGAAA +
Preference number: 4 (lower is better)
Translates to: ADPCHVFLSVGSAQEEQASEVSF*MSAWTK
Trigger: TTTCGTCCAGGCGCTCATCCAGAAGGACACCTCCGA...AGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTACTAATCTGGGGGATCTaGAAGAGCCTCAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: VNRGTTSDGKVQRSSQTVLIWGI*KSLRML
Trigger: CAACATCCTGAGGCTCTTCCAGATCCCCCAGATTAG...TACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATTTGGAAGGAATCGGGTaGCACCACGCGAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: QCRWSVAVALLTENGVADLEGIG*HHAREE
Trigger: TTCTTCTCTCGCGTGGTGCCACCCGATTCCTTCCAA...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAAAATCACGACGGCCCTaGAGTTGGGGGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LTENGVADPCHVFLSVGSKSRRP*SWGCPG
Trigger: TCCTGGACACCCCCAACTCCAGGGCCGTCGTGATTT...TGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTAAATCACGACGGCCCTaGAGTTGGGGGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SVAVALLTENGVADPCHVKSRRP*SWGCPG
Trigger: TCCTGGACACCCCCAACTCCAGGGCCGTCGTGATTT...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GTGGTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTTTATATCCTCATCGTTaGCAAAAATCACGACGGCCC +
Preference number: 4 (lower is better)
Translates to: VVHSKEPGRDLSFNTPFGLYPHR*QKSRRP
Trigger: GGGCCGTCGTGATTTTTGCCAACGATGAGGATATAA...ACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp AAGTCAATGGTCCTGTCTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCAATGGCGATATCTTCATGCTaGTGCAGTGGGTTTATTTTG +
Preference number: 4 (lower is better)
Translates to: KSMVLSLRSWGILTDWAMAISSC*CSGFIL
Trigger: CAAAATAAACCCACTGCACCAGCATGAAGATATCGC...CATTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CCA 90 bp TCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGACAAACCCTTCCACCGTaGCTCGCTTGGGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: SMSCFPKCWVSSRRTSFGQTLPP*LAWAEW
Trigger: CCATTCAGCCCAAGCGAGCCACGGTGGAAGGGTTTG...TCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GTCCTGTGGCTCTCAGTGGTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCCCTCCTGCTCATAGTTaGAATCTTTTCCAATTCTCT +
Preference number: 4 (lower is better)
Translates to: VLWLSVVHSKEPGRDLSFPPAHS*NLFQFS
Trigger: AGAGAATTGGAAAAGATTCCAACTATGAGCAGGAGG...GAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAAGCTTGCTCCATCTCTaGGCAGACACCCCGGTAGTC +
Preference number: 4 (lower is better)
Translates to: ENGVADPCHVFLSVGSAQSLLHL*ADTPVV
Trigger: GACTACCGGGGTGTCTGCCCAGAGATGGAGCAAGCT...TTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCGGTAACCCGGGTTGCTaGTGTTTGTGGTCTGGTACT +
Preference number: 4 (lower is better)
Translates to: SKTNSEPRYDIRWQSAKVGNPGC*CLWSGT
Trigger: AGTACCAGACCACAAACACCAGCAACCCGGGTTACC...GACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAACGGTCCTGCCCAAAACGGTCCTGTaGCTCTCAGTGGTCCATTCT +
Preference number: 4 (lower is better)
Translates to: LQPRSTYVIRQVSPKTVLPKTVL*LSVVHS
Trigger: AGAATGGACCACTGAGAGCCACAGGACCGTTTTGGG...CAGGACCGTTTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp AAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCCCCAAAACGGTCCTGTaGCTCTCAGTGGTCCATTCT +
Preference number: 4 (lower is better)
Translates to: KTNSEPRYDIRWQSAKVLPKTVL*LSVVHS
Trigger: AGAATGGACCACTGAGAGCCACAGGACCGTTTTGGG...GAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TCCTATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCAGGTACGACATCAGATaGCAAAGTGCAAAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SYARLGDKITEGLPPPWFRYDIR*QSAKVL
Trigger: GAGGACCTTTGCACTTTGCCATCTGATGTCGTACCT...GAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GGCAGCTTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAACATCTCAGGGGAGGAGCCAAGATaGCCGAATACGGGTGATTTC +
Preference number: 4 (lower is better)
Translates to: GSFFHFWTVPGVKHDNISGEEPR*PNTGDF
Trigger: GAAATCACCCGTATTCGGCCATCTTGGCTCCTCCCC...TGAGATGTTATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS-3UTR TCA 90 bp ACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTGGTTGGGATCACTGTTaGTCTGGTCCAGGGCGTAGA +
Preference number: 4 (lower is better)
Translates to: TENGVADPCHVFLSVGSAGWDHC*SGPGRR
Trigger: TCTACGCCCTGGACCAGATCAACAGTGATCCCAACC...AGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp TTTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACGGTTGGGATCACTGTTaGTCTGGTCCAGGGCGTAGA +
Preference number: 4 (lower is better)
Translates to: FGNVISILFVQAEVLRGYGWDHC*SGPGRR
Trigger: TCTACGCCCTGGACCAGATCAACAGTGATCCCAACC...GTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp CCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAATCGGATGTTGGCTACCATaGTGGAGACCGAACTCCCCG +
Preference number: 4 (lower is better)
Translates to: PKCWVSSRRTSFGNVISIGCWLP*WRPNSP
Trigger: CGGGGAGTTCGGTCTCCATCATGGTAGCCAACATCC...GATTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp CAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAACTTTGGAAATCTGCGTaGAGGACTCCACACCTTTCT +
Preference number: 4 (lower is better)
Translates to: QTVNRGTTSDGKVQRSSQLWKSA*RTPHLS
Trigger: AGAAAGGTGTGGAGTCCTTCACGCAGATTTCCAAAG...TTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp AGCTTTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTGGATCCCCAGCTGTCTaGTCCCACCCAAAGAAAATG +
Preference number: 4 (lower is better)
Translates to: SFGNVISILFVQAEVLRGGSPAV*SHPKKM
Trigger: CATTTTCTTTGGGTGGGATCAGACAGCTGGGGATCC...ACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp AAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAGCTTGGGCTGAATGGTaGTGGCCCCTTCTGCGATAT +
Preference number: 4 (lower is better)
Translates to: KTRHSKTNSEPRYDIRWQAWAEW*WPLLRY
Trigger: ATATCGCAGAAGGGGCCATCACCATTCAGCCCAAGC...TTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTGGGCTGAATGGTaGTGGCCCCTTCTGCGATAT +
Preference number: 4 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQAWAEW*WPLLRY
Trigger: ATATCGCAGAAGGGGCCATCACCATTCAGCCCAAGC...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp ACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTGCTTGGGCTGAATGGTaGTGGCCCCTTCTGCGATAT +
Preference number: 4 (lower is better)
Translates to: TENGVADPCHVFLSVGSAAWAEW*WPLLRY
Trigger: ATATCGCAGAAGGGGCCATCACCATTCAGCCCAAGC...AGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTGGCTCGCTTGGGCTaGATGGTGATGGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNVARLG*MVMAPS
Trigger: AGAAGGGGCCATCACCATTCAGCCCAAGCGAGCCAC...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp CATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTAGTGGCTCGCTTGGGCTaGATGGTGATGGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: HVFLSVGSAQEEQALEMLVARLG*MVMAPS
Trigger: AGAAGGGGCCATCACCATTCAGCCCAAGCGAGCCAC...TAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp CCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTCGTGGCTCGCTTGGGCTaGATGGTGATGGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PSFYVTYHIPKIGGAYFLVARLG*MVMAPS
Trigger: AGAAGGGGCCATCACCATTCAGCCCAAGCGAGCCAC...GAGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp TCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCAAAGATGGTGGCAATaGTCCCCAACATTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SKTNSEPRYDIRWQSAKVQRWWQ*SPTLPG
Trigger: TCCTGGCAATGTTGGGGATCATTGCCACCATCTTTG...GACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp TATTTCATAAAGCAGCTGTTTAGGTCGCTTGGATCCTCTAACACTGGTCTCCCGGTGATGTTGGGCTTATaGGTCTGGGAGCTGTTACTG +
Preference number: 4 (lower is better)
Translates to: YFIKQLFRSLGSSNTGLPVMLGL*VWELLL
Trigger: CAGTAACAGCTCCCAGACTCATAAGCCCAACATCAC...CGGGAGACCAGTGTTAGAGGATCCAAGCGACCTAAACAGCTGCTTTATGAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp AAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCGTACACCCCGAGTCTTaGTGGCATACACAGTACATG +
Preference number: 4 (lower is better)
Translates to: KTNSEPRYDIRWQSAKVLVHPES*WHTQYM
Trigger: CATGTACTGTGTATGCCATCAAGACTCGGGGTGTAC...GAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCTCTTTGTGCAAGCTaGGGTCCTCAGAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: QCRWSVAVALLTENGVADPLCAS*GPQRLL
Trigger: AAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGG...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp ACCCAAAGAAAATGGCCAACTTGGTCAGCTCTTTTGGCTGCTGCAAGGATCTGCTTAGGATTGGGAAACTaGGACAGGATAGAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: TQRKWPTWSALLAAARICLGLGN*DRIEGH
Trigger: ATGCCCTTCTATCCTGTCTCAGTTTCCCAATCCTAA...GCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCTTTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR TCA 90 bp ACCCAAAGAAAATGGCCAACTTGGTCAGCTCTTTTGGCTGCTGCAAGGATCTGCAATCTGGGGGATTTTTaGAGGACGTTTAGGATTGGG +
Preference number: 4 (lower is better)
Translates to: TQRKWPTWSALLAAARICNLGDF*RTFRIG
Trigger: CCCAATCCTAAACGTCCTTCAAAAATCCCCCAGATT...GCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCTTTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR GCA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTCACGGACTGGGCAATaGAGAGTCCACCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SVAVALLTENGVADPCHVSRTGQ*RVHLPL
Trigger: AAGAGGCAGGTGGACTCTGCATTGCCCAGTCCGTGA...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAATCACGGACTGGGCAATaGAGAGTCCACCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQSRTGQ*RVHLPL
Trigger: AAGAGGCAGGTGGACTCTGCATTGCCCAGTCCGTGA...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTAGGTCTGCGATATCTTCATaGTGGTGCAGTGGGTTTATT +
Preference number: 4 (lower is better)
Translates to: VHSKEPGRDLSFNTPFGRSAISS*WCSGFI
Trigger: AATAAACCCACTGCACCAGCATGAAGATATCGCAGA...CCTACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp AGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTACTTCAGCAACTTCTTaGCTCCAGCTTGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: SEPRYDIRWQSAKVLTNCTSATS*LQLAPS
Trigger: AGATGGAGCAAGCTGGAGGCAAGAAGTTGCTGAAGT...ACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp TCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAGACGGTAACCCGGGTTaGTGGTGTTTGTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: SMSCFPKCWVSSRRTSFGDGNPG*WCLWSG
Trigger: ACCAGACCACAAACACCAGCAACCCGGGTTACCGTC...TCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGACGGTAACCCGGGTTaGTGGTGTTTGTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: NGVADPCHVFLSVGSAQEDGNPG*WCLWSG
Trigger: ACCAGACCACAAACACCAGCAACCCGGGTTACCGTC...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp ACCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTGAGTTCCCGCCCAGATaGCCGGACAATGGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: TFLLCNLSYTKDRWGILSEFPPR*PDNGRV
Trigger: GACACGCCCATTGTCCGGGCATCTGGGCGGGAACTC...AGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp CTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCTGCCCTGCTCAAATATaGGATAAATCCGATTTGTTT +
Preference number: 4 (lower is better)
Translates to: LPLVGKVHNCSRVGSADVCPAQI*DKSDLF
Trigger: AAACAAATCGGATTTATCGCATATTTGAGCAGGGCA...GACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp TCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAACAGAGCTCGGTCTTTaGCTCACCGTTGGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: SMSCFPKCWVSSRRTSFGTELGL*LTVGSV
Trigger: GACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGT...TCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAACAGAGCTCGGTCTTTaGCTCACCGTTGGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: AVALLTENGVADPCHVFLTELGL*LTVGSV
Trigger: GACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGT...TAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCCGCCCAGCGTCACGTTaGGCAGTAGGTTGGGATCAC +
Preference number: 4 (lower is better)
Translates to: CFPKCWVSSRRTSFGNVIRPASR*AVGWDH
Trigger: GTGATCCCAACCTACTGCCCAACGTGACGCTGGGCG...GATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAATCGGAGGTGTCCTTCTaGATGAGCGCCTGGACGAAA +
Preference number: 4 (lower is better)
Translates to: PCHVFLSVGSAQEEQALESEVSF*MSAWTK
Trigger: TTTCGTCCAGGCGCTCATCCAGAAGGACACCTCCGA...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp AAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACTAATCTGGGGGATCTaGAAGAGCCTCAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: KQTVNRGTTSDGKVQRSSLIWGI*KSLRML
Trigger: CAACATCCTGAGGCTCTTCCAGATCCCCCAGATTAG...TGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTTGGAAGGAATCGGGTaGCACCACGCGAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VISILFVQAEVLRGYFDSLEGIG*HHAREE
Trigger: TTCTTCTCTCGCGTGGTGCCACCCGATTCCTTCCAA...GGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GCTTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAACATCTCACTGCTTGGAAGGAATCGGGTaGCACCACGCGAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: ASSIFGQFQGSNMITSHCLEGIG*HHAREE
Trigger: TTCTTCTCTCGCGTGGTGCCACCCGATTCCTTCCAA...GCAGTGAGATGTTATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS-3UTR CCA 90 bp TCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAACATCTCACTGCCTGATGTCTACCATGGCCTaGGCTTGGAAGGAATCGGGT +
Preference number: 4 (lower is better)
Translates to: SSIFGQFQGSNMITSHCLMSTMA*AWKESG
Trigger: ACCCGATTCCTTCCAAGCCCAGGCCATGGTAGACAT...CAGGCAGTGAGATGTTATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS-3UTR CCA 90 bp TCCTATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCTTACAATGTCTACCATaGCCTGGGCTTGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SYARLGDKITEGLPPPWFLQCLP*PGLGRN
Trigger: ATTCCTTCCAAGCCCAGGCCATGGTAGACATTGTAA...GAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGGGATTCTCACGGACTaGGCAATGCAGAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: ENGVADPCHVFLSVGSAQGILTD*AMQSPP
Trigger: AGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCC...TTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTGGGATTCTCACGGACTaGGCAATGCAGAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: LSQSSLCKLRSSEVTLIPGILTD*AMQSPP
Trigger: AGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCC...AGGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTGTCTTTGCGTTCCTaGGGGATTCTCACGGACTGG +
Preference number: 4 (lower is better)
Translates to: VAVALLTENGVADPCHVFLSLRS*GILTDW
Trigger: CCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAG...GAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAACTGTCTTTGCGTTCCTaGGGGATTCTCACGGACTGG +
Preference number: 4 (lower is better)
Translates to: PCHVFLSVGSAQEEQALELSLRS*GILTDW
Trigger: CCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAG...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTTCCTAAAGTCCTTATCACACTGATCAGTCAAAGGGGGCATGAACAAAACCTCCTGTCTTTGCGTTCCTaGGGGATTCTCACGGACTGG +
Preference number: 4 (lower is better)
Translates to: FPKVLITLISQRGHEQNLLSLRS*GILTDW
Trigger: CCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAG...GAGGTTTTGTTCATGCCCCCTTTGACTGATCAGTGTGATAAGGACTTTAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TGGGAAGCGGGTAGGACCAAAGAGTCCTATGCCAGGTTGGGTGACAAAATAACTAGAAAATGGCCAACTTaGTCAGCTCTTTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: WEAGRTKESYARLGDKITRKWPT*SALLAA
Trigger: AGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCT...AGTTATTTTGTCACCCAACCTGGCATAGGACTCTTTGGTCCTACCCGCTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCCATCCCACCCAAAGAAAATaGCCAACTTGGTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: YARLGDKITEGLPPPWFHPTQRK*PTWSAL
Trigger: AAGAGCTGACCAAGTTGGCCATTTTCTTTGGGTGGG...ATGGAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTGACTTATTATTCATGCTGGTGCAGTaGGTTTATTTTGGATCCCCA +
Preference number: 4 (lower is better)
Translates to: GKVHNCSRVGSADVSDLLFMLVQ*VYFGSP
Trigger: TGGGGATCCAAAATAAACCCACTGCACCAGCATGAA...TAATAAGTCACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTCAAACCCTTCCACCGTaGCTCGCTTGGGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: VALLTENGVADPCHVFLSQTLPP*LAWAEW
Trigger: CCATTCAGCCCAAGCGAGCCACGGTGGAAGGGTTTG...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTAGGCTTGTTAAACATCACTaGAGTGCCAGCACTACCATT +
Preference number: 4 (lower is better)
Translates to: VHSKEPGRDLSFNTPFGRLVKHH*SASTTI
Trigger: AATGGTAGTGCTGGCACTCCAGTGATGTTTAACAAG...CCTACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp ACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAGATGCCCGGACAATaGGCGTGTCATTGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: TENGVADPCHVFLSVGSAQMPGQ*ACHCSG
Trigger: TCCGCTACAATGACACGCCCATTGTCCGGGCATCTG...AGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCACAGATGCCCGGACAATaGGCGTGTCATTGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: LTENGVADPCHVFLSVGSQMPGQ*ACHCSG
Trigger: TCCGCTACAATGACACGCCCATTGTCCGGGCATCTG...TGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATTCTTTGCCTCACCGTTaGGTCTGTCACTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: QCRWSVAVALLTENGVADSLPHR*VCHWVC
Trigger: ACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGA...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp ACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACATTGCAGCAGGGCCTTTaGGAAAGCAGTCAAAAGCTA +
Preference number: 4 (lower is better)
Translates to: TNSEPRYDIRWQSAKVLTLQQGL*ESSQKL
Trigger: TAGCTTTTGACTGCTTTCCCAAAGGCCCTGCTGCAA...TGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486284.5
CDS-3UTR TCA 90 bp TGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCCTACTTTCTCCGGCTTaGCGAAAACCGGCGGTTCGC +
Preference number: 4 (lower is better)
Translates to: CFPKCWVSSRRTSFGNVILLSPA*RKPAVR
Trigger: GCGAACCGCCGGTTTTCGTCAAGCCGGAGAAAGTAG...GATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp TTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAAGGATGTTGGCTACCATaGTGGAGACCGAACTCCCCG +
Preference number: 4 (lower is better)
Translates to: FLSVGSAQEEQALEMLSQGCWLP*WRPNSP
Trigger: CGGGGAGTTCGGTCTCCATCATGGTAGCCAACATCC...TTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCTTTGGAAATCTGCGTaGAGGACTCCACACCTTTCT +
Preference number: 4 (lower is better)
Translates to: QCRWSVAVALLTENGVADLWKSA*RTPHLS
Trigger: AGAAAGGTGTGGAGTCCTTCACGCAGATTTCCAAAG...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGCTTGGGCTGAATGGTaGTGGCCCCTTCTGCGATAT +
Preference number: 4 (lower is better)
Translates to: VALLTENGVADPCHVFLSAWAEW*WPLLRY
Trigger: ATATCGCAGAAGGGGCCATCACCATTCAGCCCAAGC...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp GCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTCAAAGATGGTGGCAATaGTCCCCAACATTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ADPCHVFLSVGSAQEEQAQRWWQ*SPTLPG
Trigger: TCCTGGCAATGTTGGGGATCATTGCCACCATCTTTG...AGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp TCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGATCAAAAGAACATAGCTaGGTTCCCGCCCAGATGCCC +
Preference number: 4 (lower is better)
Translates to: SMSCFPKCWVSSRRTSFGSKEHS*VPAQMP
Trigger: GGGCATCTGGGCGGGAACTCAGCTATGTTCTTTTGA...TCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAATCAAAAGAACATAGCTaGGTTCCCGCCCAGATGCCC +
Preference number: 4 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQSKEHS*VPAQMP
Trigger: GGGCATCTGGGCGGGAACTCAGCTATGTTCTTTTGA...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAAGAGGGCTGCATAACTaGTGCACATACCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: NGVADPCHVFLSVGSAQERGLHN*CTYPSP
Trigger: TGGGCTTGGGTATGTGCATCAGTTATGCAGCCCTCT...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp AGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTTTCGAAAACAAACAGTaGACCGAGGTACGACATCAG +
Preference number: 4 (lower is better)
Translates to: SEPRYDIRWQSAKVLTNCFENKQ*TEVRHQ
Trigger: CTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAA...ACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp TATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCCATTTCGAAAACAAACAGTaGACCGAGGTACGACATCAG +
Preference number: 4 (lower is better)
Translates to: YARLGDKITEGLPPPWFHFENKQ*TEVRHQ
Trigger: CTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAA...ATGGAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp GGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAAGCCTCTTTGGAAATCTaGGTGAAGGACTCCACACCT +
Preference number: 4 (lower is better)
Translates to: GVADPCHVFLSVGSAQEEASLEI*VKDSTP
Trigger: AGGTGTGGAGTCCTTCACGCAGATTTCCAAAGAGGC...TTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTTCACGGACTGGGCAATaGAGAGTCCACCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: VALLTENGVADPCHVFLSSRTGQ*RVHLPL
Trigger: AAGAGGCAGGTGGACTCTGCATTGCCCAGTCCGTGA...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp ACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAGTCAGCTCTTTTGGCTaGTGCAAGGATCTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: TNSEPRYDIRWQSAKVLTVSSFG*CKDLLY
Trigger: ATAAAGCAGATCCTTGCAGCAGCCAAAAGAGCTGAC...TGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp ACCCAAAGAAAATGGCCAACTTGGTCAGCTCTTTTGGCTGCTGCAAGGATCTGCTCTGCGATATCTTCATaGTGGTGCAGTGGGTTTATT +
Preference number: 4 (lower is better)
Translates to: TQRKWPTWSALLAAARICSAISS*WCSGFI
Trigger: AATAAACCCACTGCACCAGCATGAAGATATCGCAGA...GCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCTTTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR GCA 90 bp TCCTATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCTCTGCGATATCTTCATaGTGGTGCAGTGGGTTTATT +
Preference number: 4 (lower is better)
Translates to: SYARLGDKITEGLPPPWFSAISS*WCSGFI
Trigger: AATAAACCCACTGCACCAGCATGAAGATATCGCAGA...GAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp TTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTGGTGATGGCCCCTTCTaGGATATCTTCATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LSQSSLCKLRSSEVTLIPGDGPF*DIFMLV
Trigger: CACCAGCATGAAGATATCGCAGAAGGGGCCATCACC...AGGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCGGTGATGGCCCCTTCTaGGATATCTTCATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VAVALLTENGVADPCHVFGDGPF*DIFMLV
Trigger: CACCAGCATGAAGATATCGCAGAAGGGGCCATCACC...GAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp AGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTTTCTCTCCTGTCCTGTaGATTTGCGATCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SEPRYDIRWQSAKVLTNCFSPVL*ICDLCL
Trigger: AAGACACAGATCGCAAATGCACAGGACAGGAGAGAA...ACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATAGCCATAGCATAGACTaGGTCAATCACGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: QCRWSVAVALLTENGVADSHSID*VNHELD
Trigger: GTCCAGTTCGTGATTGACGCAGTCTATGCTATGGCT...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp TTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTCTTGCCTCCAGCTTaGTCCATCTCTGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: LEMLSQSSLCKLRSSEVTFLPPA*SISGQT
Trigger: TGTCTGCCCAGAGATGGAGCAAGCTGGAGGCAAGAA...AGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp AGCTTTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTGCTTACATGGTAGTGTaGACACTGAGGCGGGTATCT +
Preference number: 4 (lower is better)
Translates to: SFGNVISILFVQAEVLRGAYMVV*TLRRVS
Trigger: AGATACCCGCCTCAGTGTGCACACTACCATGTAAGC...ACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp AGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTAATGATCCCCAACATTaGCAGGAAGACAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: SEPRYDIRWQSAKVLTNCNDPQH*QEDRNH
Trigger: GTGATTCCTGTCTTCCTGGCAATGTTGGGGATCATT...ACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATCGCTTCCAGCCTGTaGATCCCGTTTTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PCHVFLSVGSAQEEQALEIASSL*IPFSLL
Trigger: CAAGAGGGAAAACGGGATCCACAGGCTGGAAGCGAT...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp AAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAATCGCTTCCAGCCTGTaGATCCCGTTTTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: KTRHSKTNSEPRYDIRWQIASSL*IPFSLL
Trigger: CAAGAGGGAAAACGGGATCCACAGGCTGGAAGCGAT...TTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp AATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCGGAGGTGTCCTTCTaGATGAGCGCCTGGACGAAA +
Preference number: 4 (lower is better)
Translates to: NVISILFVQAEVLRGYFDSEVSF*MSAWTK
Trigger: TTTCGTCCAGGCGCTCATCCAGAAGGACACCTCCGA...ATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTCTAATCTGGGGGATCTaGAAGAGCCTCAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: ADPCHVFLSVGSAQEEQALIWGI*KSLRML
Trigger: CAACATCCTGAGGCTCTTCCAGATCCCCCAGATTAG...AGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp ACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTTTGGAAGGAATCGGGTaGCACCACGCGAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: TENGVADPCHVFLSVGSALEGIG*HHAREE
Trigger: TTCTTCTCTCGCGTGGTGCCACCCGATTCCTTCCAA...AGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp ATGAAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGTTGGAAGGAATCGGGTaGCACCACGCGAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: MKTRHSKTNSEPRYDIRWLEGIG*HHAREE
Trigger: TTCTTCTCTCGCGTGGTGCCACCCGATTCCTTCCAA...CCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAATGTCTACCATGGCCTaGGCTTGGAAGGAATCGGGT +
Preference number: 4 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQMSTMA*AWKESG
Trigger: ACCCGATTCCTTCCAAGCCCAGGCCATGGTAGACAT...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp ACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTATGTCTACCATGGCCTaGGCTTGGAAGGAATCGGGT +
Preference number: 4 (lower is better)
Translates to: TENGVADPCHVFLSVGSAMSTMA*AWKESG
Trigger: ACCCGATTCCTTCCAAGCCCAGGCCATGGTAGACAT...AGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTCAAAACCTTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAGGGATTCTCACGGACTaGGCAATGCAGAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: FKTLQPRSTYVIRQVSPKGILTD*AMQSPP
Trigger: AGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCC...TTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAAGGTTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp CCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAATCCTGTCTTTGCGTTCCTaGGGGATTCTCACGGACTGG +
Preference number: 4 (lower is better)
Translates to: PKCWVSSRRTSFGNVISILSLRS*GILTDW
Trigger: CCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAG...GATTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTCAAATCACGACGGCCCTaGAGTTGGGGGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSFYVTYHIPKIGGAYFLKSRRP*SWGCPG
Trigger: TCCTGGACACCCCCAACTCCAGGGCCGTCGTGATTT...GAGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCCACCCAAAGAAAATaGCCAACTTGGTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: QCRWSVAVALLTENGVADPTQRK*PTWSAL
Trigger: AAGAGCTGACCAAGTTGGCCATTTTCTTTGGGTGGG...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAACGGTCCTGCCCACCCAAAGAAAATaGCCAACTTGGTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LQPRSTYVIRQVSPKTVLPTQRK*PTWSAL
Trigger: AAGAGCTGACCAAGTTGGCCATTTTCTTTGGGTGGG...CAGGACCGTTTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GACTTGAGTTTCAACACTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTGCGATATCTTCATGCTaGTGCAGTGGGTTTATTTTG +
Preference number: 4 (lower is better)
Translates to: DLSFNTPFGREGPQLQPSAISSC*CSGFIL
Trigger: CAAAATAAACCCACTGCACCAGCATGAAGATATCGC...ACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAGTGTTGAAACTCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp CCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTCCAAACCCTTCCACCGTaGCTCGCTTGGGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: PSFYVTYHIPKIGGAYFLQTLPP*LAWAEW
Trigger: CCATTCAGCCCAAGCGAGCCACGGTGGAAGGGTTTG...GAGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCAGCTTGCTCCATCTCTaGGCAGACACCCCGGTAGTC +
Preference number: 4 (lower is better)
Translates to: CFPKCWVSSRRTSFGNVISLLHL*ADTPVV
Trigger: GACTACCGGGGTGTCTGCCCAGAGATGGAGCAAGCT...GATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATAGCTTGCTCCATCTCTaGGCAGACACCCCGGTAGTC +
Preference number: 4 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNSLLHL*ADTPVV
Trigger: GACTACCGGGGTGTCTGCCCAGAGATGGAGCAAGCT...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCGGTAACCCGGGTTGCTaGTGTTTGTGGTCTGGTACT +
Preference number: 4 (lower is better)
Translates to: VAVALLTENGVADPCHVFGNPGC*CLWSGT
Trigger: AGTACCAGACCACAAACACCAGCAACCCGGGTTACC...GAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACGGTAACCCGGGTTGCTaGTGTTTGTGGTCTGGTACT +
Preference number: 4 (lower is better)
Translates to: FGNVISILFVQAEVLRGYGNPGC*CLWSGT
Trigger: AGTACCAGACCACAAACACCAGCAACCCGGGTTACC...GTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTGGTAACCCGGGTTGCTaGTGTTTGTGGTCTGGTACT +
Preference number: 4 (lower is better)
Translates to: SVAVALLTENGVADPCHVGNPGC*CLWSGT
Trigger: AGTACCAGACCACAAACACCAGCAACCCGGGTTACC...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTCAGATGCCCGGACAATaGGCGTGTCATTGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: VALLTENGVADPCHVFLSQMPGQ*ACHCSG
Trigger: TCCGCTACAATGACACGCCCATTGTCCGGGCATCTG...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp AGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTACACACTGCCACATCTaGTTTGGCAATCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: SEPRYDIRWQSAKVLTNCTHCHI*FGNHQE
Trigger: TTCCTGATGATTGCCAAACCAGATGTGGCAGTGTGT...ACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp CCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTTATGATGATGTTGGGTaGATCAACACCAAACCAAAT +
Preference number: 4 (lower is better)
Translates to: PLVGKVHNCSRVGSADVSYDDVG*INTKPN
Trigger: ATTTGGTTTGGTGTTGATCCACCCAACATCATCATA...ACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAATCTTTGCCTCACCGTTaGGTCTGTCACTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: GVADPCHVFLSVGSAQEESLPHR*VCHWVC
Trigger: ACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGA...TTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTGACTTATTACATGGTTCCATGGAATaGAACAGGTTAGATAACCAG +
Preference number: 4 (lower is better)
Translates to: GKVHNCSRVGSADVSDLLHGSME*NRLDNQ
Trigger: CTGGTTATCTAACCTGTTCCATTCCATGGAACCATG...TAATAAGTCACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TATTTCATAAAGCAGCTGTTTAGGTCGCTTGGATCCTCTAACACTGGTCTCCCGAGGTACGACATCAGATaGCAAAGTGCAAAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: YFIKQLFRSLGSSNTGLPRYDIR*QSAKVL
Trigger: GAGGACCTTTGCACTTTGCCATCTGATGTCGTACCT...CGGGAGACCAGTGTTAGAGGATCCAAGCGACCTAAACAGCTGCTTTATGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp ACCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTGGATGTTGGCTACCATaGTGGAGACCGAACTCCCCG +
Preference number: 4 (lower is better)
Translates to: TFLLCNLSYTKDRWGILSGCWLP*WRPNSP
Trigger: CGGGGAGTTCGGTCTCCATCATGGTAGCCAACATCC...AGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp GTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCCTTTGGAAATCTGCGTaGAGGACTCCACACCTTTCT +
Preference number: 4 (lower is better)
Translates to: VISILFVQAEVLRGYFDSLWKSA*RTPHLS
Trigger: AGAAAGGTGTGGAGTCCTTCACGCAGATTTCCAAAG...GGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp AATATTCCACCGTCTGAGAGAATAGGGCTCTATGAAAACAAGGCATTCGAAAACGGATCCCCAGCTGTCTaGTCCCACCCAAAGAAAATG +
Preference number: 4 (lower is better)
Translates to: NIPPSERIGLYENKAFENGSPAV*SHPKKM
Trigger: CATTTTCTTTGGGTGGGATCAGACAGCTGGGGATCC...GTTTTCGAATGCCTTGTTTTCATAGAGCCCTATTCTCTCAGACGGTGGAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGGATCCCCAGCTGTCTaGTCCCACCCAAAGAAAATG +
Preference number: 4 (lower is better)
Translates to: VALLTENGVADPCHVFLSGSPAV*SHPKKM
Trigger: CATTTTCTTTGGGTGGGATCAGACAGCTGGGGATCC...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp TCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCTCTTCTATATTGAGCTaGAGTTCGTCTGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: SKTNSEPRYDIRWQSAKVSSILS*SSSVHC
Trigger: GCAGTGGACAGACGAACTTCAGCTCAATATAGAAGA...GACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp GAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAACAAAGATGGTGGCAATaGTCCCCAACATTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ENGVADPCHVFLSVGSAQQRWWQ*SPTLPG
Trigger: TCCTGGCAATGTTGGGGATCATTGCCACCATCTTTG...TTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAACAAAGATGGTGGCAATaGTCCCCAACATTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PCHVFLSVGSAQEEQALEQRWWQ*SPTLPG
Trigger: TCCTGGCAATGTTGGGGATCATTGCCACCATCTTTG...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp CCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAATCTCAAAAGAACATAGCTaGGTTCCCGCCCAGATGCCC +
Preference number: 4 (lower is better)
Translates to: PKCWVSSRRTSFGNVISISKEHS*VPAQMP
Trigger: GGGCATCTGGGCGGGAACTCAGCTATGTTCTTTTGA...GATTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp TTCAAAACCTTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAATCAAAAGAACATAGCTaGGTTCCCGCCCAGATGCCC +
Preference number: 4 (lower is better)
Translates to: FKTLQPRSTYVIRQVSPKSKEHS*VPAQMP
Trigger: GGGCATCTGGGCGGGAACTCAGCTATGTTCTTTTGA...TTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAAGGTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp CTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGTGATGTTGGGCTTATaGGTCTGGGAGCTGTTACTG +
Preference number: 4 (lower is better)
Translates to: LTENGVADPCHVFLSVGSVMLGL*VWELLL
Trigger: CAGTAACAGCTCCCAGACTCATAAGCCCAACATCAC...TGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTGTGATGTTGGGCTTATaGGTCTGGGAGCTGTTACTG +
Preference number: 4 (lower is better)
Translates to: SVAVALLTENGVADPCHVVMLGL*VWELLL
Trigger: CAGTAACAGCTCCCAGACTCATAAGCCCAACATCAC...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp TTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAACGGTCCTGCAACACCAAACCAAATaGACACCCCTAGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LQPRSTYVIRQVSPKTVLQHQTK*TPLEAE
Trigger: TTCAGCTTCTAGGGGTGTTCATTTGGTTTGGTGTTG...CAGGACCGTTTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp GTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCGTACACCCCGAGTCTTaGTGGCATACACAGTACATG +
Preference number: 4 (lower is better)
Translates to: VAVALLTENGVADPCHVFVHPES*WHTQYM
Trigger: CATGTACTGTGTATGCCATCAAGACTCGGGGTGTAC...GAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAGTACACCCCGAGTCTTaGTGGCATACACAGTACATG +
Preference number: 4 (lower is better)
Translates to: PCHVFLSVGSAQEEQALEVHPES*WHTQYM
Trigger: CATGTACTGTGTATGCCATCAAGACTCGGGGTGTAC...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp TTTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACGTACACCCCGAGTCTTaGTGGCATACACAGTACATG +
Preference number: 4 (lower is better)
Translates to: FGNVISILFVQAEVLRGYVHPES*WHTQYM
Trigger: CATGTACTGTGTATGCCATCAAGACTCGGGGTGTAC...GTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp CCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTCAGCCAGGGCGGGACTTaGGTTTCAACACTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PSFYVTYHIPKIGGAYFLSQGGT*VSTLPL
Trigger: CAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCT...GAGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp GCTTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAACATCTCACTGCAGACTACCTTGGCTGTaGTCACGTTCTCCTCATAAC +
Preference number: 4 (lower is better)
Translates to: ASSIFGQFQGSNMITSHCRLPWL*SRSPHN
Trigger: GTTATGAGGAGAACGTGATCACAGCCAAGGTAGTCT...GCAGTGAGATGTTATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS-3UTR GCA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGCCTCTTTGGAAATCTaGGTGAAGGACTCCACACCT +
Preference number: 4 (lower is better)
Translates to: NGVADPCHVFLSVGSAQEASLEI*VKDSTP
Trigger: AGGTGTGGAGTCCTTCACGCAGATTTCCAAAGAGGC...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCGCCTCTTTGGAAATCTaGGTGAAGGACTCCACACCT +
Preference number: 4 (lower is better)
Translates to: VAVALLTENGVADPCHVFASLEI*VKDSTP
Trigger: AGGTGTGGAGTCCTTCACGCAGATTTCCAAAGAGGC...GAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp AAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAGCCTCTTTGGAAATCTaGGTGAAGGACTCCACACCT +
Preference number: 4 (lower is better)
Translates to: KTRHSKTNSEPRYDIRWQASLEI*VKDSTP
Trigger: AGGTGTGGAGTCCTTCACGCAGATTTCCAAAGAGGC...TTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp GTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCAATGCAGAGTCCACCTaGCTCTTTGGAAATCTGCGT +
Preference number: 4 (lower is better)
Translates to: VISILFVQAEVLRGYFDSNAEST*LFGNLR
Trigger: ACGCAGATTTCCAAAGAGGCAGGTGGACTCTGCATT...GGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGCAATGGTCCTGTCTTTaGGTTCCTGGGGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: DPCHVFLSVGSAQEEQALQWSCL*VPGGFS
Trigger: TGAGAATCCCCCAGGAACGCAAAGACAGGACCATTG...CAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAACAATGGTCCTGTCTTTaGGTTCCTGGGGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: PCHVFLSVGSAQEEQALEQWSCL*VPGGFS
Trigger: TGAGAATCCCCCAGGAACGCAAAGACAGGACCATTG...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp AAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAACAATGGTCCTGTCTTTaGGTTCCTGGGGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: KTRHSKTNSEPRYDIRWQQWSCL*VPGGFS
Trigger: TGAGAATCCCCCAGGAACGCAAAGACAGGACCATTG...TTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGGTGATGGCCCCTTCTaGGATATCTTCATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VALLTENGVADPCHVFLSGDGPF*DIFMLV
Trigger: CACCAGCATGAAGATATCGCAGAAGGGGCCATCACC...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp CCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTCGACGGTAACCCGGGTTaGTGGTGTTTGTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: PSFYVTYHIPKIGGAYFLDGNPG*WCLWSG
Trigger: ACCAGACCACAAACACCAGCAACCCGGGTTACCGTC...GAGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp GCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAGCTTACATGGTAGTGTaGACACTGAGGCGGGTATCT +
Preference number: 4 (lower is better)
Translates to: AVALLTENGVADPCHVFLAYMVV*TLRRVS
Trigger: AGATACCCGCCTCAGTGTGCACACTACCATGTAAGC...TAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATAATGATCCCCAACATTaGCAGGAAGACAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: QCRWSVAVALLTENGVADNDPQH*QEDRNH
Trigger: GTGATTCCTGTCTTCCTGGCAATGTTGGGGATCATT...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp TATTTCATAAAGCAGCTGTTTAGGTCGCTTGGATCCTCTAACACTGGTCTCCCGCATCAGATGGCAAAGTaGAAAGGTCCTCACAAACTG +
Preference number: 4 (lower is better)
Translates to: YFIKQLFRSLGSSNTGLPHQMAK*KGPHKL
Trigger: CAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATG...CGGGAGACCAGTGTTAGAGGATCCAAGCGACCTAAACAGCTGCTTTATGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGACTAATCTGGGGGATCTaGAAGAGCCTCAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: SMSCFPKCWVSSRRTSFGLIWGI*KSLRML
Trigger: CAACATCCTGAGGCTCTTCCAGATCCCCCAGATTAG...TCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCACTAATCTGGGGGATCTaGAAGAGCCTCAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: LTENGVADPCHVFLSVGSLIWGI*KSLRML
Trigger: CAACATCCTGAGGCTCTTCCAGATCCCCCAGATTAG...TGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTATGTCTACCATGGCCTaGGCTTGGAAGGAATCGGGT +
Preference number: 4 (lower is better)
Translates to: VALLTENGVADPCHVFLSMSTMA*AWKESG
Trigger: ACCCGATTCCTTCCAAGCCCAGGCCATGGTAGACAT...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp AAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCATTACAATGTCTACCATaGCCTGGGCTTGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: KQTVNRGTTSDGKVQRSSLQCLP*PGLGRN
Trigger: ATTCCTTCCAAGCCCAGGCCATGGTAGACATTGTAA...TGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAACTTGGTCAGCTCTTTTaGCTGCTGCAAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: PCHVFLSVGSAQEEQALELGQLF*LLQGSA
Trigger: AGCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAG...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTCTTGGTCAGCTCTTTTaGCTGCTGCAAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: LEMLSQSSLCKLRSSEVTLGQLF*LLQGSA
Trigger: AGCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAG...AGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp AGAAAATGGCCAACTTGGTCAGCTCTTTTGGCTGCTGCAAGGATCTGCTTTATACCCACCCAAAGAAAATaGCCAACTTGGTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: RKWPTWSALLAAARICFIPTQRK*PTWSAL
Trigger: AAGAGCTGACCAAGTTGGCCATTTTCTTTGGGTGGG...TATAAAGCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CCA 90 bp AAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCTTCATGCTGGTGCAGTaGGTTTATTTTGGATCCCCA +
Preference number: 4 (lower is better)
Translates to: KTNSEPRYDIRWQSAKVLFMLVQ*VYFGSP
Trigger: TGGGGATCCAAAATAAACCCACTGCACCAGCATGAA...GAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TTCAAAACCTTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAGGTAACCCGGGTTGCTaGTGTTTGTGGTCTGGTACT +
Preference number: 4 (lower is better)
Translates to: FKTLQPRSTYVIRQVSPKGNPGC*CLWSGT
Trigger: AGTACCAGACCACAAACACCAGCAACCCGGGTTACC...TTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAAGGTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TATTTCATAAAGCAGCTGTTTAGGTCGCTTGGATCCTCTAACACTGGTCTCCCGACACACTGCCACATCTaGTTTGGCAATCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: YFIKQLFRSLGSSNTGLPTHCHI*FGNHQE
Trigger: TTCCTGATGATTGCCAAACCAGATGTGGCAGTGTGT...CGGGAGACCAGTGTTAGAGGATCCAAGCGACCTAAACAGCTGCTTTATGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp ACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCTTCGCTTCCGTTTCTaGACATTGAGTTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: TENGVADPCHVFLSVGSALRFRF*TLSSGW
Trigger: CCACCCTGAACTCAATGTCCAGAAACGGAAGCGAAG...AGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAATCTTTGCCTCACCGTTaGGTCTGTCACTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: PCHVFLSVGSAQEEQALESLPHR*VCHWVC
Trigger: ACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGA...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTTCCTAAAGTCCTTATCACACTGATCAGTCAAAGGGGGCATGAACAAAACCTCTCTTTGCCTCACCGTTaGGTCTGTCACTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: FPKVLITLISQRGHEQNLSLPHR*VCHWVC
Trigger: ACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGA...GAGGTTTTGTTCATGCCCCCTTTGACTGATCAGTGTGATAAGGACTTTAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TTTCCTAAAGTCCTTATCACACTGATCAGTCAAAGGGGGCATGAACAAAACCTCTCCTGTGGCTCTCAGTaGTCCATTCTAAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: FPKVLITLISQRGHEQNLSCGSQ*SILKSQ
Trigger: CTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGA...GAGGTTTTGTTCATGCCCCCTTTGACTGATCAGTGTGATAAGGACTTTAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTATATACCAAAGATAGGTaGGGCATACTTTCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: VNRGTTSDGKVQRSSQTVYTKDR*GILSQH
Trigger: GTGCTGAGAAAGTATGCCCCACCTATCTTTGGTATA...TACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTAGATGCCAGTGCAGATaGTCAGTAGCAGTTGCACTT +
Preference number: 4 (lower is better)
Translates to: ADPCHVFLSVGSAQEEQARCQCR*SVAVAL
Trigger: AAGTGCAACTGCTACTGACCATCTGCACTGGCATCT...AGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389335.7
ENST00000440923.7
3UTR CAA 72 bp TGTTTGATAATTCTATCAAAGTCAATGGTCCTGTCTTaGCGTTCCTGGGGGATTCTCACGGACTGGGCAATG +
Preference number: 4 (lower is better)
Translates to: CLIILSKSMVLS*RSWGILTDWAM
Trigger: CATTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTTTGATAGAATTATCAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR TCA 90 bp GAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAACTTTGGAAATCTGCGTaGAGGACTCCACACCTTTCT +
Preference number: 4 (lower is better)
Translates to: ENGVADPCHVFLSVGSAQLWKSA*RTPHLS
Trigger: AGAAAGGTGTGGAGTCCTTCACGCAGATTTCCAAAG...TTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp TGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCGGATCCCCAGCTGTCTaGTCCCACCCAAAGAAAATG +
Preference number: 4 (lower is better)
Translates to: CFPKCWVSSRRTSFGNVIGSPAV*SHPKKM
Trigger: CATTTTCTTTGGGTGGGATCAGACAGCTGGGGATCC...GATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp GCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTCTTCTATATTGAGCTaGAGTTCGTCTGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: ADPCHVFLSVGSAQEEQASSILS*SSSVHC
Trigger: GCAGTGGACAGACGAACTTCAGCTCAATATAGAAGA...AGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp TGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCAGAGGGCTGCATAACTaGTGCACATACCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: CFPKCWVSSRRTSFGNVIRGLHN*CTYPSP
Trigger: TGGGCTTGGGTATGTGCATCAGTTATGCAGCCCTCT...GATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp ACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAGAGAATAGGGCTCTATaGAAACAAGGCATTCGAAAA +
Preference number: 4 (lower is better)
Translates to: TNSEPRYDIRWQSAKVLTENRAL*KQGIRK
Trigger: TTTTCGAATGCCTTGTTTTCATAGAGCCCTATTCTC...TGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp TGTTTGATAATTCTATCAAAGTCAATGGTCCTGTCTTTGCGTTCCTGGGGGATTGCCTCTTTGGAAATCTaGGTGAAGGACTCCACACCT +
Preference number: 4 (lower is better)
Translates to: CLIILSKSMVLSLRSWGIASLEI*VKDSTP
Trigger: AGGTGTGGAGTCCTTCACGCAGATTTCCAAAGAGGC...AATCCCCCAGGAACGCAAAGACAGGACCATTGACTTTGATAGAATTATCAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR GCA 90 bp TTCAAAACCTTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAACAATGGTCCTGTCTTTaGGTTCCTGGGGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: FKTLQPRSTYVIRQVSPKQWSCL*VPGGFS
Trigger: TGAGAATCCCCCAGGAACGCAAAGACAGGACCATTG...TTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAAGGTTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp CAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTAGAGAAGTCAGCTCTTTTGGCTaGTGCAAGGATCTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: QSSLCKLRSSEVTLIPREVSSFG*CKDLLY
Trigger: ATAAAGCAGATCCTTGCAGCAGCCAAAAGAGCTGAC...TTCTCTAGGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp CATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATTCTTGCCTCCAGCTTaGTCCATCTCTGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: HVFLSVGSAQEEQALEMLFLPPA*SISGQT
Trigger: TGTCTGCCCAGAGATGGAGCAAGCTGGAGGCAAGAA...TAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp TTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAATTCTTGCCTCCAGCTTaGTCCATCTCTGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: FLSVGSAQEEQALEMLSQFLPPA*SISGQT
Trigger: TGTCTGCCCAGAGATGGAGCAAGCTGGAGGCAAGAA...TTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGACTTCAGCAACTTCTTaGCTCCAGCTTGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: DPCHVFLSVGSAQEEQALTSATS*LQLAPS
Trigger: AGATGGAGCAAGCTGGAGGCAAGAAGTTGCTGAAGT...CAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAACCGGAAAGAACACACTaGCACATCTGGTTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: NGVADPCHVFLSVGSAQEPERTH*HIWFGN
Trigger: ATTGCCAAACCAGATGTGGCAGTGTGTTCTTTCCGG...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp TTTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACCCGGAAAGAACACACTaGCACATCTGGTTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: FGNVISILFVQAEVLRGYPERTH*HIWFGN
Trigger: ATTGCCAAACCAGATGTGGCAGTGTGTTCTTTCCGG...GTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAAAATCGCTTGACTAGATaGCAGTGCAGATGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: GVADPCHVFLSVGSAQEENRLTR*QCRWSV
Trigger: TACTGACCATCTGCACTGGCATCTAGTCAAGCGATT...TTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389335.7
ENST00000440923.7
CDS-3UTR GCA 90 bp CTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCATCTCAATCCTCTTTGTaGAAGCTGAGGTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LTENGVADPCHVFLSVGSSQSSL*KLRSSE
Trigger: CTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGA...TGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCGCTTCCAGCCTGTaGATCCCGTTTTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SCFPKCWVSSRRTSFGNVIASSL*IPFSLL
Trigger: CAAGAGGGAAAACGGGATCCACAGGCTGGAAGCGAT...AACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTAATCGCTTCCAGCCTGTaGATCCCGTTTTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: HVFLSVGSAQEEQALEMLIASSL*IPFSLL
Trigger: CAAGAGGGAAAACGGGATCCACAGGCTGGAAGCGAT...TAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTCTTGGAAGGAATCGGGTaGCACCACGCGAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PSFYVTYHIPKIGGAYFLLEGIG*HHAREE
Trigger: TTCTTCTCTCGCGTGGTGCCACCCGATTCCTTCCAA...GAGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAATTACAATGTCTACCATaGCCTGGGCTTGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: GVADPCHVFLSVGSAQEELQCLP*PGLGRN
Trigger: ATTCCTTCCAAGCCCAGGCCATGGTAGACATTGTAA...TTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp AGAAAATGGCCAACTTGGTCAGCTCTTTTGGCTGCTGCAAGGATCTGCTTTATATTACAATGTCTACCATaGCCTGGGCTTGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: RKWPTWSALLAAARICFILQCLP*PGLGRN
Trigger: ATTCCTTCCAAGCCCAGGCCATGGTAGACATTGTAA...TATAAAGCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CCA 90 bp GCAGCTTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAACATCTCACTTACAATGTCTACCATaGCCTGGGCTTGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: AASSIFGQFQGSNMITSHLQCLP*PGLGRN
Trigger: ATTCCTTCCAAGCCCAGGCCATGGTAGACATTGTAA...GTGAGATGTTATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS-3UTR CCA 90 bp CAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAATTCTATCAAAGTCAATaGTCCTGTCTTTGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: QTVNRGTTSDGKVQRSSQFYQSQ*SCLCVP
Trigger: AGGAACGCAAAGACAGGACCATTGACTTTGATAGAA...TTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAACCCACCCAAAGAAAATaGCCAACTTGGTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQPTQRK*PTWSAL
Trigger: AAGAGCTGACCAAGTTGGCCATTTTCTTTGGGTGGG...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp AGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTCCTCCTGCTCATAGTTaGAATCTTTTCCAATTCTCT +
Preference number: 4 (lower is better)
Translates to: SEPRYDIRWQSAKVLTNCPPAHS*NLFQFS
Trigger: AGAGAATTGGAAAAGATTCCAACTATGAGCAGGAGG...ACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp AAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACTTGTTAAACATCACTaGAGTGCCAGCACTACCATT +
Preference number: 4 (lower is better)
Translates to: KQTVNRGTTSDGKVQRSSLVKHH*SASTTI
Trigger: AATGGTAGTGCTGGCACTCCAGTGATGTTTAACAAG...TGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAAACACACTGCCACATCTaGTTTGGCAATCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: GVADPCHVFLSVGSAQEETHCHI*FGNHQE
Trigger: TTCCTGATGATTGCCAAACCAGATGTGGCAGTGTGT...TTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTAGAGAAACACACTGCCACATCTaGTTTGGCAATCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: QSSLCKLRSSEVTLIPRETHCHI*FGNHQE
Trigger: TTCCTGATGATTGCCAAACCAGATGTGGCAGTGTGT...TTCTCTAGGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GACTTGAGTTTCAACACTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTACATTGAGTTCAGGGTaGAAAATGATGATGTACACT +
Preference number: 4 (lower is better)
Translates to: DLSFNTPFGREGPQLQPSTLSSG*KMMMYT
Trigger: AGTGTACATCATCATTTTCCACCCTGAACTCAATGT...ACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAGTGTTGAAACTCAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTCTTCGCTTCCGTTTCTaGACATTGAGTTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VALLTENGVADPCHVFLSLRFRF*TLSSGW
Trigger: CCACCCTGAACTCAATGTCCAGAAACGGAAGCGAAG...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTCAAAACCTTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAACTTCGCTTCCGTTTCTaGACATTGAGTTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: FKTLQPRSTYVIRQVSPKLRFRF*TLSSGW
Trigger: CCACCCTGAACTCAATGTCCAGAAACGGAAGCGAAG...TTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAAGGTTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp TTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAACGGTCCTGCATGGTTCCATGGAATaGAACAGGTTAGATAACCAG +
Preference number: 4 (lower is better)
Translates to: LQPRSTYVIRQVSPKTVLHGSME*NRLDNQ
Trigger: CTGGTTATCTAACCTGTTCCATTCCATGGAACCATG...CAGGACCGTTTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GACTTGAGTTTCAACACTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTACACTCTTTCTTACTaGTGGTATACAGTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: DLSFNTPFGREGPQLQPSYTLSY*WYTVVW
Trigger: CCAAACAACTGTATACCACCAGTAAGAAAGAGTGTA...ACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAGTGTTGAAACTCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486284.5
CDS-3UTR TCA 90 bp GGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTTCTTCTATATTGAGCTaGAGTTCGTCTGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: GNVISILFVQAEVLRGYFSSILS*SSSVHC
Trigger: GCAGTGGACAGACGAACTTCAGCTCAATATAGAAGA...AAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAGCATGTCTTCTATATTaGGCTGAAGTTCGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PCHVFLSVGSAQEEQALEACLLY*AEVRLS
Trigger: GGACAGACGAACTTCAGCTCAATATAGAAGACATGC...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp GTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCGCATGTCTTCTATATTaGGCTGAAGTTCGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: VAVALLTENGVADPCHVFACLLY*AEVRLS
Trigger: GGACAGACGAACTTCAGCTCAATATAGAAGACATGC...GAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp GAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAACAACACCAAACCAAATaGACACCCCTAGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: ENGVADPCHVFLSVGSAQQHQTK*TPLEAE
Trigger: TTCAGCTTCTAGGGGTGTTCATTTGGTTTGGTGTTG...TTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp TCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCGAGAATAGGGCTCTATaGAAACAAGGCATTCGAAAA +
Preference number: 4 (lower is better)
Translates to: SKTNSEPRYDIRWQSAKVENRAL*KQGIRK
Trigger: TTTTCGAATGCCTTGTTTTCATAGAGCCCTATTCTC...GACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATCCTCTTTGTGCAAGCTaGGGTCCTCAGAGGTTATGT +
Preference number: 4 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNPLCAS*GPQRLC
Trigger: ACATAACCTCTGAGGACCTCAGCTTGCACAAAGAGG...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389335.7
CDS-3UTR TCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATCCTCTTTGTGCAAGCTaGGGTCCTCAGAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNPLCAS*GPQRLL
Trigger: AAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGG...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp TCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCATAACTTCCTTCCGATaGGAGGGTAGACACATAATT +
Preference number: 4 (lower is better)
Translates to: SKTNSEPRYDIRWQSAKVITSFR*EGRHII
Trigger: AATTATGTGTCTACCCTCGCATCGGAAGGAAGTTAT...GACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp CCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTCGCCTCTTTGGAAATCTaGGTGAAGGACTCCACACCT +
Preference number: 4 (lower is better)
Translates to: PSFYVTYHIPKIGGAYFLASLEI*VKDSTP
Trigger: AGGTGTGGAGTCCTTCACGCAGATTTCCAAAGAGGC...GAGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATCAATGGTCCTGTCTTTaGGTTCCTGGGGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNQWSCL*VPGGFS
Trigger: TGAGAATCCCCCAGGAACGCAAAGACAGGACCATTG...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp CTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTGCTGCAAGGATCTaGTTTATATCCTCATCGTTG +
Preference number: 4 (lower is better)
Translates to: LTENGVADPCHVFLSVGSAAARI*FISSSL
Trigger: CAACGATGAGGATATAAAGCAGATCCTTGCAGCAGC...TGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCGCTGCTGCAAGGATCTaGTTTATATCCTCATCGTTG +
Preference number: 4 (lower is better)
Translates to: VAVALLTENGVADPCHVFAAARI*FISSSL
Trigger: CAACGATGAGGATATAAAGCAGATCCTTGCAGCAGC...GAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGTCAGCTCTTTTGGCTaGTGCAAGGATCTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: DPCHVFLSVGSAQEEQALVSSFG*CKDLLY
Trigger: ATAAAGCAGATCCTTGCAGCAGCCAAAAGAGCTGAC...CAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp TCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAGTCAGCTCTTTTGGCTaGTGCAAGGATCTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: SMSCFPKCWVSSRRTSFGVSSFG*CKDLLY
Trigger: ATAAAGCAGATCCTTGCAGCAGCCAAAAGAGCTGAC...TCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAATTCTCTCCTGTCCTGTaGATTTGCGATCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: NGVADPCHVFLSVGSAQEFSPVL*ICDLCL
Trigger: AAGACACAGATCGCAAATGCACAGGACAGGAGAGAA...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCTCTCCTGTCCTGTaGATTTGCGATCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SVAVALLTENGVADPCHVFSPVL*ICDLCL
Trigger: AAGACACAGATCGCAAATGCACAGGACAGGAGAGAA...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTAGCCATAGCATAGACTaGGTCAATCACGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: VALLTENGVADPCHVFLSSHSID*VNHELD
Trigger: GTCCAGTTCGTGATTGACGCAGTCTATGCTATGGCT...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp CATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTAGCTTACATGGTAGTGTaGACACTGAGGCGGGTATCT +
Preference number: 4 (lower is better)
Translates to: HVFLSVGSAQEEQALEMLAYMVV*TLRRVS
Trigger: AGATACCCGCCTCAGTGTGCACACTACCATGTAAGC...TAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAAATGATCCCCAACATTaGCAGGAAGACAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: NGVADPCHVFLSVGSAQENDPQH*QEDRNH
Trigger: GTGATTCCTGTCTTCCTGGCAATGTTGGGGATCATT...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp ACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTAATGATCCCCAACATTaGCAGGAAGACAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: TENGVADPCHVFLSVGSANDPQH*QEDRNH
Trigger: GTGATTCCTGTCTTCCTGGCAATGTTGGGGATCATT...AGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTATTTCGTCAAGAGGGCTaGATAACTGATGCACATACC +
Preference number: 4 (lower is better)
Translates to: AVALLTENGVADPCHVFLFRQEG*ITDAHT
Trigger: GGTATGTGCATCAGTTATGCAGCCCTCTTGACGAAA...TAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp ATGAAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGTTTCGTCAAGAGGGCTaGATAACTGATGCACATACC +
Preference number: 4 (lower is better)
Translates to: MKTRHSKTNSEPRYDIRWFRQEG*ITDAHT
Trigger: GGTATGTGCATCAGTTATGCAGCCCTCTTGACGAAA...CCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp AGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTTGCCCTGCTCAAATATaGGATAAATCCGATTTGTTT +
Preference number: 4 (lower is better)
Translates to: SEPRYDIRWQSAKVLTNCCPAQI*DKSDLF
Trigger: AAACAAATCGGATTTATCGCATATTTGAGCAGGGCA...ACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAATTGACTAGATGCCAGTaGAGATGGTCAGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: PCHVFLSVGSAQEEQALELTRCQ*RWSVAV
Trigger: AACTGCTACTGACCATCTGCACTGGCATCTAGTCAA...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389335.7
ENST00000440923.7
CDS-3UTR GCA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAAATCGCTTGACTAGATaGCAGTGCAGATGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: NGVADPCHVFLSVGSAQENRLTR*QCRWSV
Trigger: TACTGACCATCTGCACTGGCATCTAGTCAAGCGATT...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389335.7
ENST00000440923.7
CDS-3UTR GCA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTTCTCAATCCTCTTTGTaGAAGCTGAGGTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: VALLTENGVADPCHVFLSSQSSL*KLRSSE
Trigger: CTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGA...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGATTACAATGTCTACCATaGCCTGGGCTTGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SMSCFPKCWVSSRRTSFGLQCLP*PGLGRN
Trigger: ATTCCTTCCAAGCCCAGGCCATGGTAGACATTGTAA...TCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGATTATATCCTCATCGTTaGCAAAAATCACGACGGCCC +
Preference number: 4 (lower is better)
Translates to: SMSCFPKCWVSSRRTSFGLYPHR*QKSRRP
Trigger: GGGCCGTCGTGATTTTTGCCAACGATGAGGATATAA...TCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAATTATATCCTCATCGTTaGCAAAAATCACGACGGCCC +
Preference number: 4 (lower is better)
Translates to: PCHVFLSVGSAQEEQALELYPHR*QKSRRP
Trigger: GGGCCGTCGTGATTTTTGCCAACGATGAGGATATAA...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAATTATATCCTCATCGTTaGCAAAAATCACGACGGCCC +
Preference number: 4 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQLYPHR*QKSRRP
Trigger: GGGCCGTCGTGATTTTTGCCAACGATGAGGATATAA...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATCTTGGTCAGCTCTTTTaGCTGCTGCAAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNLGQLF*LLQGSA
Trigger: AGCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAG...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAAGAAAATGGCCAACTTaGTCAGCTCTTTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQRKWPT*SALLAA
Trigger: AGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCT...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTAGAAAATGGCCAACTTaGTCAGCTCTTTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SVAVALLTENGVADPCHVRKWPT*SALLAA
Trigger: AGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCT...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAATTCATGCTGGTGCAGTaGGTTTATTTTGGATCCCCA +
Preference number: 4 (lower is better)
Translates to: PCHVFLSVGSAQEEQALEFMLVQ*VYFGSP
Trigger: TGGGGATCCAAAATAAACCCACTGCACCAGCATGAA...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp ACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTTTCATGCTGGTGCAGTaGGTTTATTTTGGATCCCCA +
Preference number: 4 (lower is better)
Translates to: TENGVADPCHVFLSVGSAFMLVQ*VYFGSP
Trigger: TGGGGATCCAAAATAAACCCACTGCACCAGCATGAA...AGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCCTTGTTAAACATCACTaGAGTGCCAGCACTACCATT +
Preference number: 4 (lower is better)
Translates to: VISILFVQAEVLRGYFDSLVKHH*SASTTI
Trigger: AATGGTAGTGCTGGCACTCCAGTGATGTTTAACAAG...GGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAGGTTGCTGGTGTTTGTaGTCTGGTACTGAAAGATGT +
Preference number: 4 (lower is better)
Translates to: PCHVFLSVGSAQEEQALEGCWCL*SGTERC
Trigger: ACATCTTTCAGTACCAGACCACAAACACCAGCAACC...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTGGTTGCTGGTGTTTGTaGTCTGGTACTGAAAGATGT +
Preference number: 4 (lower is better)
Translates to: LSQSSLCKLRSSEVTLIPGCWCL*SGTERC
Trigger: ACATCTTTCAGTACCAGACCACAAACACCAGCAACC...AGGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp AAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAGGTTGCTGGTGTTTGTaGTCTGGTACTGAAAGATGT +
Preference number: 4 (lower is better)
Translates to: KTRHSKTNSEPRYDIRWQGCWCL*SGTERC
Trigger: ACATCTTTCAGTACCAGACCACAAACACCAGCAACC...TTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp ACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACATATGATGATGTTGGGTaGATCAACACCAAACCAAAT +
Preference number: 4 (lower is better)
Translates to: TNSEPRYDIRWQSAKVLTYDDVG*INTKPN
Trigger: ATTTGGTTTGGTGTTGATCCACCCAACATCATCATA...TGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp CATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTACTTCGCTTCCGTTTCTaGACATTGAGTTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: HVFLSVGSAQEEQALEMLLRFRF*TLSSGW
Trigger: CCACCCTGAACTCAATGTCCAGAAACGGAAGCGAAG...TAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TCTGATGAGGCAGCTTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAAGCTTCTTCCATTTTTaGACAGTTCCAGGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: SDEAASSIFGQFQGSNMISFFHF*TVPGVK
Trigger: TTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGCT...TATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGCTGCCTCATCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS-3UTR CCA 90 bp AAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCAAGCTATACTGTTGGTaGGATAGTGTACCAAGTAAC +
Preference number: 4 (lower is better)
Translates to: KTNSEPRYDIRWQSAKVLKLYCW*DSVPSN
Trigger: GTTACTTGGTACACTATCCCACCAACAGTATAGCTT...GAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486284.5
CDS-3UTR TCA 90 bp TTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTCGTCAACTTGCAGTTaGAGTTTTCCTCCCAGTATT +
Preference number: 4 (lower is better)
Translates to: LEMLSQSSLCKLRSSEVTSSTCS*SFPPSI
Trigger: AATACTGGGAGGAAAACTTCAACTGCAAGTTGACGA...AGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp TTCAAAACCTTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAGCATGTCTTCTATATTaGGCTGAAGTTCGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: FKTLQPRSTYVIRQVSPKACLLY*AEVRLS
Trigger: GGACAGACGAACTTCAGCTCAATATAGAAGACATGC...TTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAAGGTTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGCATGTCTTCTATATTaGGCTGAAGTTCGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: VALLTENGVADPCHVFLSACLLY*AEVRLS
Trigger: GGACAGACGAACTTCAGCTCAATATAGAAGACATGC...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp TATTTCATAAAGCAGCTGTTTAGGTCGCTTGGATCCTCTAACACTGGTCTCCCGATATTAAACTGGAAGTaGTTGCCAGTTGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: YFIKQLFRSLGSSNTGLPILNWK*LPVVML
Trigger: CAACATCACAACTGGCAATCACTTCCAGTTTAATAT...CGGGAGACCAGTGTTAGAGGATCCAAGCGACCTAAACAGCTGCTTTATGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp TTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAACATCTCACTGCCTCTAGTTCTACCTTTTTaGGAAGACTACCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: FFHFWTVPGVKHDNISLPLVLPF*EDYLGC
Trigger: ACAGCCAAGGTAGTCTTCTCAAAAAGGTAGAACTAG...AGGCAGTGAGATGTTATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS-3UTR GCA 90 bp GCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTATAACTTCCTTCCGATaGGAGGGTAGACACATAATT +
Preference number: 4 (lower is better)
Translates to: ADPCHVFLSVGSAQEEQAITSFR*EGRHII
Trigger: AATTATGTGTCTACCCTCGCATCGGAAGGAAGTTAT...AGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GCAGCTTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAACATCTCACATAACTTCCTTCCGATaGGAGGGTAGACACATAATT +
Preference number: 4 (lower is better)
Translates to: AASSIFGQFQGSNMITSHITSFR*EGRHII
Trigger: AATTATGTGTCTACCCTCGCATCGGAAGGAAGTTAT...GTGAGATGTTATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS-3UTR GCA 90 bp TGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCAATGCAGAGTCCACCTaGCTCTTTGGAAATCTGCGT +
Preference number: 4 (lower is better)
Translates to: CFPKCWVSSRRTSFGNVINAEST*LFGNLR
Trigger: ACGCAGATTTCCAAAGAGGCAGGTGGACTCTGCATT...GATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp TTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAAAATGCAGAGTCCACCTaGCTCTTTGGAAATCTGCGT +
Preference number: 4 (lower is better)
Translates to: FLSVGSAQEEQALEMLSQNAEST*LFGNLR
Trigger: ACGCAGATTTCCAAAGAGGCAGGTGGACTCTGCATT...TTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp AATATTCCACCGTCTGAGAGAATAGGGCTCTATGAAAACAAGGCATTCGAAAACGCTGCTGCAAGGATCTaGTTTATATCCTCATCGTTG +
Preference number: 4 (lower is better)
Translates to: NIPPSERIGLYENKAFENAAARI*FISSSL
Trigger: CAACGATGAGGATATAAAGCAGATCCTTGCAGCAGC...GTTTTCGAATGCCTTGTTTTCATAGAGCCCTATTCTCTCAGACGGTGGAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp AATATTCCACCGTCTGAGAGAATAGGGCTCTATGAAAACAAGGCATTCGAAAACGTCAGCTCTTTTGGCTaGTGCAAGGATCTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: NIPPSERIGLYENKAFENVSSFG*CKDLLY
Trigger: ATAAAGCAGATCCTTGCAGCAGCCAAAAGAGCTGAC...GTTTTCGAATGCCTTGTTTTCATAGAGCCCTATTCTCTCAGACGGTGGAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp GATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGTCTGCGATATCTTCATaGTGGTGCAGTGGGTTTATT +
Preference number: 4 (lower is better)
Translates to: DPCHVFLSVGSAQEEQALSAISS*WCSGFI
Trigger: AATAAACCCACTGCACCAGCATGAAGATATCGCAGA...CAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAATCTGCGATATCTTCATaGTGGTGCAGTGGGTTTATT +
Preference number: 4 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQSAISS*WCSGFI
Trigger: AATAAACCCACTGCACCAGCATGAAGATATCGCAGA...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATAGCCATAGCATAGACTaGGTCAATCACGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNSHSID*VNHELD
Trigger: GTCCAGTTCGTGATTGACGCAGTCTATGCTATGGCT...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp CCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTCACTTCAGCAACTTCTTaGCTCCAGCTTGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: PSFYVTYHIPKIGGAYFLTSATS*LQLAPS
Trigger: AGATGGAGCAAGCTGGAGGCAAGAAGTTGCTGAAGT...GAGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp TGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCACTTCAGCAACTTCTTaGCTCCAGCTTGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: CFPKCWVSSRRTSFGNVITSATS*LQLAPS
Trigger: AGATGGAGCAAGCTGGAGGCAAGAAGTTGCTGAAGT...GATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATACTTCAGCAACTTCTTaGCTCCAGCTTGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNTSATS*LQLAPS
Trigger: AGATGGAGCAAGCTGGAGGCAAGAAGTTGCTGAAGT...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATCCGGAAAGAACACACTaGCACATCTGGTTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNPERTH*HIWFGN
Trigger: ATTGCCAAACCAGATGTGGCAGTGTGTTCTTTCCGG...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp AAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCAATACATTACTGGCATaGATTCCAAAGATCAAGACC +
Preference number: 4 (lower is better)
Translates to: KTNSEPRYDIRWQSAKVLNTLLA*IPKIKT
Trigger: GGTCTTGATCTTTGGAATGCATGCCAGTAATGTATT...GAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATTCTCAATCCTCTTTGTaGAAGCTGAGGTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNSQSSL*KLRSSE
Trigger: CTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGA...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp AATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTTACAATGTCTACCATaGCCTGGGCTTGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: NVISILFVQAEVLRGYFDLQCLP*PGLGRN
Trigger: ATTCCTTCCAAGCCCAGGCCATGGTAGACATTGTAA...ATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp AGCTTTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTTCTATCAAAGTCAATaGTCCTGTCTTTGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: SFGNVISILFVQAEVLRGFYQSQ*SCLCVP
Trigger: AGGAACGCAAAGACAGGACCATTGACTTTGATAGAA...ACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp AATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATAGAAAATGGCCAACTTaGTCAGCTCTTTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: NVISILFVQAEVLRGYFDRKWPT*SALLAA
Trigger: AGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCT...ATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTACCCACCCAAAGAAAATaGCCAACTTGGTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: HVFLSVGSAQEEQALEMLPTQRK*PTWSAL
Trigger: AAGAGCTGACCAAGTTGGCCATTTTCTTTGGGTGGG...TAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTTTCATGCTGGTGCAGTaGGTTTATTTTGGATCCCCA +
Preference number: 4 (lower is better)
Translates to: VALLTENGVADPCHVFLSFMLVQ*VYFGSP
Trigger: TGGGGATCCAAAATAAACCCACTGCACCAGCATGAA...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTGCGATATCTTCATGCTaGTGCAGTGGGTTTATTTTG +
Preference number: 4 (lower is better)
Translates to: SVAVALLTENGVADPCHVAISSC*CSGFIL
Trigger: CAAAATAAACCCACTGCACCAGCATGAAGATATCGC...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCGATATCTTCATGCTaGTGCAGTGGGTTTATTTTG +
Preference number: 4 (lower is better)
Translates to: LTENGVADPCHVFLSVGSAISSC*CSGFIL
Trigger: CAAAATAAACCCACTGCACCAGCATGAAGATATCGC...TGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTTCCTAAAGTCCTTATCACACTGATCAGTCAAAGGGGGCATGAACAAAACCTCGCGATATCTTCATGCTaGTGCAGTGGGTTTATTTTG +
Preference number: 4 (lower is better)
Translates to: FPKVLITLISQRGHEQNLAISSC*CSGFIL
Trigger: CAAAATAAACCCACTGCACCAGCATGAAGATATCGC...GAGGTTTTGTTCATGCCCCCTTTGACTGATCAGTGTGATAAGGACTTTAGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCCCTCCTGCTCATAGTTaGAATCTTTTCCAATTCTCT +
Preference number: 4 (lower is better)
Translates to: VISILFVQAEVLRGYFDSPPAHS*NLFQFS
Trigger: AGAGAATTGGAAAAGATTCCAACTATGAGCAGGAGG...GGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTCTTGTTAAACATCACTaGAGTGCCAGCACTACCATT +
Preference number: 4 (lower is better)
Translates to: LSQSSLCKLRSSEVTLIPLVKHH*SASTTI
Trigger: AATGGTAGTGCTGGCACTCCAGTGATGTTTAACAAG...AGGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAATGATGGGAATATCCTaGCATCCGGTTCGATTTTCA +
Preference number: 4 (lower is better)
Translates to: SMSCFPKCWVSSRRTSFGMMGIS*HPVRFS
Trigger: TGAAAATCGAACCGGATGCCAGGATATTCCCATCAT...TCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTATGATGGGAATATCCTaGCATCCGGTTCGATTTTCA +
Preference number: 4 (lower is better)
Translates to: LEMLSQSSLCKLRSSEVTMMGIS*HPVRFS
Trigger: TGAAAATCGAACCGGATGCCAGGATATTCCCATCAT...AGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAATGATGGGAATATCCTaGCATCCGGTTCGATTTTCA +
Preference number: 4 (lower is better)
Translates to: NGVADPCHVFLSVGSAQEMMGIS*HPVRFS
Trigger: TGAAAATCGAACCGGATGCCAGGATATTCCCATCAT...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp AATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATACACACTGCCACATCTaGTTTGGCAATCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: NVISILFVQAEVLRGYFDTHCHI*FGNHQE
Trigger: TTCCTGATGATTGCCAAACCAGATGTGGCAGTGTGT...ATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATTATGATGATGTTGGGTaGATCAACACCAAACCAAAT +
Preference number: 4 (lower is better)
Translates to: QCRWSVAVALLTENGVADYDDVG*INTKPN
Trigger: ATTTGGTTTGGTGTTGATCCACCCAACATCATCATA...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCAGATGCCAGTGCAGATaGTCAGTAGCAGTTGCACTT +
Preference number: 4 (lower is better)
Translates to: CFPKCWVSSRRTSFGNVIRCQCR*SVAVAL
Trigger: AAGTGCAACTGCTACTGACCATCTGCACTGGCATCT...GATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389335.7
ENST00000440923.7
CDS-3UTR CCA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTCTCAGAGGTTATGTTTaGGTCTACGTTTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: SVAVALLTENGVADPCHVLRGYV*VYVFTE
Trigger: CTCTGTGAAAACGTAGACCCAAACATAACCTCTGAG...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389335.7
CDS-3UTR CCA 90 bp GGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAATGTTTTCCTAAGTGTTaGGTCAGCTCAAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: GVADPCHVFLSVGSAQEECFPKC*VSSRRT
Trigger: TGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA...TTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTAGAGAACAAAAGCTATACTGTTaGTGGGATAGTGTACCAAGT +
Preference number: 4 (lower is better)
Translates to: QSSLCKLRSSEVTLIPREQKLYC*WDSVPS
Trigger: ACTTGGTACACTATCCCACCAACAGTATAGCTTTTG...TTCTCTAGGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467425.5
CDS-3UTR TCA 90 bp AATATTCCACCGTCTGAGAGAATAGGGCTCTATGAAAACAAGGCATTCGAAAACTCGTCAACTTGCAGTTaGAGTTTTCCTCCCAGTATT +
Preference number: 4 (lower is better)
Translates to: NIPPSERIGLYENKAFENSSTCS*SFPPSI
Trigger: AATACTGGGAGGAAAACTTCAACTGCAAGTTGACGA...GTTTTCGAATGCCTTGTTTTCATAGAGCCCTATTCTCTCAGACGGTGGAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATTCTTCTATATTGAGCTaGAGTTCGTCTGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNSSILS*SSSVHC
Trigger: GCAGTGGACAGACGAACTTCAGCTCAATATAGAAGA...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp GGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTAACACCCCTAGAAGCTaGACTGATATTAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: GNVISILFVQAEVLRGYFNTPRS*TDIKLE
Trigger: TTCCAGTTTAATATCAGTTCAGCTTCTAGGGGTGTT...AAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp CTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAAACACCCCTAGAAGCTaGACTGATATTAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: LTENGVADPCHVFLSVGSNTPRS*TDIKLE
Trigger: TTCCAGTTTAATATCAGTTCAGCTTCTAGGGGTGTT...TGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp TGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCCAACACCAAACCAAATaGACACCCCTAGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: CFPKCWVSSRRTSFGNVIQHQTK*TPLEAE
Trigger: TTCAGCTTCTAGGGGTGTTCATTTGGTTTGGTGTTG...GATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp CAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTAGAGAACCTCAGAGGTTACTTTaGTTCCTAGAGAAAGTTAAT +
Preference number: 4 (lower is better)
Translates to: QSSLCKLRSSEVTLIPREPQRLL*FLEKVN
Trigger: ATTAACTTTCTCTAGGAATCAAAGTAACCTCTGAGG...TTCTCTAGGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp GGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACCTCAGAGGTTACTTTaGTTCCTAGAGAAAGTTAAT +
Preference number: 4 (lower is better)
Translates to: GVADPCHVFLSVGSAQEEPQRLL*FLEKVN
Trigger: ATTAACTTTCTCTAGGAATCAAAGTAACCTCTGAGG...TTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp CTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAATAACTTCCTTCCGATaGGAGGGTAGACACATAATT +
Preference number: 4 (lower is better)
Translates to: LTENGVADPCHVFLSVGSITSFR*EGRHII
Trigger: AATTATGTGTCTACCCTCGCATCGGAAGGAAGTTAT...TGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp TCCAGGAGCTGTTTGATAATTCTATCAAAGTCAATGGTCCTGTCTTTGCGTTCCATAACTTCCTTCCGATaGGAGGGTAGACACATAATT +
Preference number: 4 (lower is better)
Translates to: SRSCLIILSKSMVLSLRSITSFR*EGRHII
Trigger: AATTATGTGTCTACCCTCGCATCGGAAGGAAGTTAT...GGAACGCAAAGACAGGACCATTGACTTTGATAGAATTATCAAACAGCTCCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR GCA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAATAACTTCCTTCCGATaGGAGGGTAGACACATAATT +
Preference number: 4 (lower is better)
Translates to: NGVADPCHVFLSVGSAQEITSFR*EGRHII
Trigger: AATTATGTGTCTACCCTCGCATCGGAAGGAAGTTAT...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp TGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCGCTGCTGCAAGGATCTaGTTTATATCCTCATCGTTG +
Preference number: 4 (lower is better)
Translates to: CFPKCWVSSRRTSFGNVIAAARI*FISSSL
Trigger: CAACGATGAGGATATAAAGCAGATCCTTGCAGCAGC...GATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp CATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATTCTCTCCTGTCCTGTaGATTTGCGATCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: HVFLSVGSAQEEQALEMLFSPVL*ICDLCL
Trigger: AAGACACAGATCGCAAATGCACAGGACAGGAGAGAA...TAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp CCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTCTTCTCTCCTGTCCTGTaGATTTGCGATCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: PSFYVTYHIPKIGGAYFLFSPVL*ICDLCL
Trigger: AAGACACAGATCGCAAATGCACAGGACAGGAGAGAA...GAGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAATGTAGCAAAGAAAGATaGCCGTCAAAAGAACATAGC +
Preference number: 4 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQCSKER*PSKEHS
Trigger: GCTATGTTCTTTTGACGGGCATCTTTCTTTGCTACA...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp TTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAATTTCGTCAAGAGGGCTaGATAACTGATGCACATACC +
Preference number: 4 (lower is better)
Translates to: FLSVGSAQEEQALEMLSQFRQEG*ITDAHT
Trigger: GGTATGTGCATCAGTTATGCAGCCCTCTTGACGAAA...TTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp AGCTTTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTGCCCTGCTCAAATATaGGATAAATCCGATTTGTTT +
Preference number: 4 (lower is better)
Translates to: SFGNVISILFVQAEVLRGCPAQI*DKSDLF
Trigger: AAACAAATCGGATTTATCGCATATTTGAGCAGGGCA...ACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp TCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTTTGACTAGATGCCAGTaGAGATGGTCAGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: SCFPKCWVSSRRTSFGNVLTRCQ*RWSVAV
Trigger: AACTGCTACTGACCATCTGCACTGGCATCTAGTCAA...AACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389335.7
ENST00000440923.7
CDS-3UTR GCA 90 bp GCAGCTTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAACATCTCACGTCTTTCCAAATTGCTaGTTCTGTGTAATACCTTGT +
Preference number: 4 (lower is better)
Translates to: AASSIFGQFQGSNMITSHVFPNC*FCVIPC
Trigger: ACAAGGTATTACACAGAAGCAGCAATTTGGAAAGAC...GTGAGATGTTATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS-3UTR GCA 90 bp GCTTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAACATCTCACTGCATGGTCTTTCCAAATTaGTGCTTCTGTGTAATACCT +
Preference number: 4 (lower is better)
Translates to: ASSIFGQFQGSNMITSHCMVFPN*CFCVIP
Trigger: AGGTATTACACAGAAGCAGCAATTTGGAAAGACCAT...GCAGTGAGATGTTATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS-3UTR GCA 90 bp TCTGATGAGGCAGCTTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAATGATAACATCTCACTaGCTGCAATGTCATCTAGTT +
Preference number: 4 (lower is better)
Translates to: SDEAASSIFGQFQGSNMIMITSH*LQCHLV
Trigger: AACTAGATGACATTGCAGGCAGTGAGATGTTATCAT...TATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGCTGCCTCATCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS-3UTR CCA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAATTCTATCAAAGTCAATaGTCCTGTCTTTGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: NGVADPCHVFLSVGSAQEFYQSQ*SCLCVP
Trigger: AGGAACGCAAAGACAGGACCATTGACTTTGATAGAA...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCATTCTATCAAAGTCAATaGTCCTGTCTTTGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: LTENGVADPCHVFLSVGSFYQSQ*SCLCVP
Trigger: AGGAACGCAAAGACAGGACCATTGACTTTGATAGAA...TGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTCAGAAAATGGCCAACTTaGTCAGCTCTTTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSFYVTYHIPKIGGAYFLRKWPT*SALLAA
Trigger: AGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCT...GAGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAACCTCCTGCTCATAGTTaGAATCTTTTCCAATTCTCT +
Preference number: 4 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQPPAHS*NLFQFS
Trigger: AGAGAATTGGAAAAGATTCCAACTATGAGCAGGAGG...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTCGGTTGCTGGTGTTTGTaGTCTGGTACTGAAAGATGT +
Preference number: 4 (lower is better)
Translates to: PSFYVTYHIPKIGGAYFLGCWCL*SGTERC
Trigger: ACATCTTTCAGTACCAGACCACAAACACCAGCAACC...GAGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp CATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTAGGTTGCTGGTGTTTGTaGTCTGGTACTGAAAGATGT +
Preference number: 4 (lower is better)
Translates to: HVFLSVGSAQEEQALEMLGCWCL*SGTERC
Trigger: ACATCTTTCAGTACCAGACCACAAACACCAGCAACC...TAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTCAAAACCTTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAATATACCAAAGATAGGTaGGGCATACTTTCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: FKTLQPRSTYVIRQVSPKYTKDR*GILSQH
Trigger: GTGCTGAGAAAGTATGCCCCACCTATCTTTGGTATA...TTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAAGGTTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp CTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCATGTTTTCCTAAGTGTTaGGTCAGCTCAAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: LTENGVADPCHVFLSVGSCFPKC*VSSRRT
Trigger: TGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA...TGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTGGTATACAGTTGTTTaGGTCTACGTTTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: SVAVALLTENGVADPCHVWYTVV*VYVFTE
Trigger: CTCTGTGAAAACGTAGACCCAAACAACTGTATACCA...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467425.5
CDS-3UTR CCA 90 bp TCTGATGAGGCAGCTTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAAAGAATCTCTCAAGATaGTCTTTCCAAATTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SDEAASSIFGQFQGSNMIKNLSR*SFQIAA
Trigger: AGCAGCAATTTGGAAAGACCATCTTGAGAGATTCTT...TATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGCTGCCTCATCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS-3UTR CCA 90 bp GTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCAAGCTATACTGTTGGTaGGATAGTGTACCAAGTAAC +
Preference number: 4 (lower is better)
Translates to: VAVALLTENGVADPCHVFKLYCW*DSVPSN
Trigger: GTTACTTGGTACACTATCCCACCAACAGTATAGCTT...GAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467425.5
CDS-3UTR TCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATTCGTCAACTTGCAGTTaGAGTTTTCCTCCCAGTATT +
Preference number: 4 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNSSTCS*SFPPSI
Trigger: AATACTGGGAGGAAAACTTCAACTGCAAGTTGACGA...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp TGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCGTCAACTTGCAGTTaGAGTTTTCCTCCCAGTATT +
Preference number: 4 (lower is better)
Translates to: CFPKCWVSSRRTSFGNVISSTCS*SFPPSI
Trigger: AATACTGGGAGGAAAACTTCAACTGCAAGTTGACGA...GATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAATATTAAACTGGAAGTaGTTGCCAGTTGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQILNWK*LPVVML
Trigger: CAACATCACAACTGGCAATCACTTCCAGTTTAATAT...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp GATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGATATTAAACTGGAAGTaGTTGCCAGTTGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: DPCHVFLSVGSAQEEQALILNWK*LPVVML
Trigger: CAACATCACAACTGGCAATCACTTCCAGTTTAATAT...CAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAATATTAAACTGGAAGTaGTTGCCAGTTGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: NGVADPCHVFLSVGSAQEILNWK*LPVVML
Trigger: CAACATCACAACTGGCAATCACTTCCAGTTTAATAT...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR TCA 90 bp AATATTCCACCGTCTGAGAGAATAGGGCTCTATGAAAACAAGGCATTCGAAAACAACACCCCTAGAAGCTaGACTGATATTAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: NIPPSERIGLYENKAFENNTPRS*TDIKLE
Trigger: TTCCAGTTTAATATCAGTTCAGCTTCTAGGGGTGTT...GTTTTCGAATGCCTTGTTTTCATAGAGCCCTATTCTCTCAGACGGTGGAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp TTCAAAACCTTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAAACACCCCTAGAAGCTaGACTGATATTAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: FKTLQPRSTYVIRQVSPKNTPRS*TDIKLE
Trigger: TTCCAGTTTAATATCAGTTCAGCTTCTAGGGGTGTT...TTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAAGGTTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR GCA 90 bp TCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTTCTGCGATATCTTCATaGTGGTGCAGTGGGTTTATT +
Preference number: 4 (lower is better)
Translates to: SCFPKCWVSSRRTSFGNVSAISS*WCSGFI
Trigger: AATAAACCCACTGCACCAGCATGAAGATATCGCAGA...AACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAATGCCCTGCTCAAATATaGGATAAATCCGATTTGTTT +
Preference number: 4 (lower is better)
Translates to: NGVADPCHVFLSVGSAQECPAQI*DKSDLF
Trigger: AAACAAATCGGATTTATCGCATATTTGAGCAGGGCA...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp CATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTAGCGATATCTTCATGCTaGTGCAGTGGGTTTATTTTG +
Preference number: 4 (lower is better)
Translates to: HVFLSVGSAQEEQALEMLAISSC*CSGFIL
Trigger: CAAAATAAACCCACTGCACCAGCATGAAGATATCGC...TAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTCTTGTTAAACATCACTaGAGTGCCAGCACTACCATT +
Preference number: 4 (lower is better)
Translates to: SCFPKCWVSSRRTSFGNVLVKHH*SASTTI
Trigger: AATGGTAGTGCTGGCACTCCAGTGATGTTTAACAAG...AACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTACATTGAGTTCAGGGTaGAAAATGATGATGTACACT +
Preference number: 4 (lower is better)
Translates to: SVAVALLTENGVADPCHVTLSSG*KMMMYT
Trigger: AGTGTACATCATCATTTTCCACCCTGAACTCAATGT...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAACATCTCACTGCCTGTGTTTCCTTATAGACTaGGGTTCTGTTTTTATGAAG +
Preference number: 4 (lower is better)
Translates to: SSIFGQFQGSNMITSHCLCFLID*GSVFMK
Trigger: CTTCATAAAAACAGAACCCCAGTCTATAAGGAAACA...CAGGCAGTGAGATGTTATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS-3UTR TCA 90 bp AATATTCCACCGTCTGAGAGAATAGGGCTCTATGAAAACAAGGCATTCGAAAACATATTAAACTGGAAGTaGTTGCCAGTTGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: NIPPSERIGLYENKAFENILNWK*LPVVML
Trigger: CAACATCACAACTGGCAATCACTTCCAGTTTAATAT...GTTTTCGAATGCCTTGTTTTCATAGAGCCCTATTCTCTCAGACGGTGGAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR TCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATAACACCCCTAGAAGCTaGACTGATATTAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNNTPRS*TDIKLE
Trigger: TTCCAGTTTAATATCAGTTCAGCTTCTAGGGGTGTT...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp TGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTGTAGCAAAGAAAGATaGCCGTCAAAAGAACATAGC +
Preference number: 4 (lower is better)
Translates to: CFPKCWVSSRRTSFGNVICSKER*PSKEHS
Trigger: GCTATGTTCTTTTGACGGGCATCTTTCTTTGCTACA...GATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp TTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAATGTAGCAAAGAAAGATaGCCGTCAAAAGAACATAGC +
Preference number: 4 (lower is better)
Translates to: FLSVGSAQEEQALEMLSQCSKER*PSKEHS
Trigger: GCTATGTTCTTTTGACGGGCATCTTTCTTTGCTACA...TTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR GCA 90 bp AATATTCCACCGTCTGAGAGAATAGGGCTCTATGAAAACAAGGCATTCGAAAACAATACATTACTGGCATaGATTCCAAAGATCAAGACC +
Preference number: 4 (lower is better)
Translates to: NIPPSERIGLYENKAFENNTLLA*IPKIKT
Trigger: GGTCTTGATCTTTGGAATGCATGCCAGTAATGTATT...GTTTTCGAATGCCTTGTTTTCATAGAGCCCTATTCTCTCAGACGGTGGAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATCCTCCTGCTCATAGTTaGAATCTTTTCCAATTCTCT +
Preference number: 4 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNPPAHS*NLFQFS
Trigger: AGAGAATTGGAAAAGATTCCAACTATGAGCAGGAGG...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTTATGATGATGTTGGGTaGATCAACACCAAACCAAAT +
Preference number: 4 (lower is better)
Translates to: VALLTENGVADPCHVFLSYDDVG*INTKPN
Trigger: ATTTGGTTTGGTGTTGATCCACCCAACATCATCATA...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp AATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATACATTGAGTTCAGGGTaGAAAATGATGATGTACACT +
Preference number: 4 (lower is better)
Translates to: NVISILFVQAEVLRGYFDTLSSG*KMMMYT
Trigger: AGTGTACATCATCATTTTCCACCCTGAACTCAATGT...ATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATTGTTTTCCTAAGTGTTaGGTCAGCTCAAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNCFPKC*VSSRRT
Trigger: TGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTTACACTCTTTCTTACTaGTGGTATACAGTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: VALLTENGVADPCHVFLSYTLSY*WYTVVW
Trigger: CCAAACAACTGTATACCACCAGTAAGAAAGAGTGTA...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467425.5
CDS-3UTR CCA 90 bp CCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTCCAAAAGCTATACTGTTaGTGGGATAGTGTACCAAGT +
Preference number: 4 (lower is better)
Translates to: PSFYVTYHIPKIGGAYFLQKLYC*WDSVPS
Trigger: ACTTGGTACACTATCCCACCAACAGTATAGCTTTTG...GAGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486284.5
CDS-3UTR GCA 90 bp TTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAATGCCCTGCTCAAATATaGGATAAATCCGATTTGTTT +
Preference number: 4 (lower is better)
Translates to: FLSVGSAQEEQALEMLSQCPAQI*DKSDLF
Trigger: AAACAAATCGGATTTATCGCATATTTGAGCAGGGCA...TTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp ACCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTTTCTATCAAAGTCAATaGTCCTGTCTTTGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: TFLLCNLSYTKDRWGILSFYQSQ*SCLCVP
Trigger: AGGAACGCAAAGACAGGACCATTGACTTTGATAGAA...AGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CCA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATTATGATGATGTTGGGTaGATCAACACCAAACCAAAT +
Preference number: 4 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNYDDVG*INTKPN
Trigger: ATTTGGTTTGGTGTTGATCCACCCAACATCATCATA...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CCA 90 bp TTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAAACATTGAGTTCAGGGTaGAAAATGATGATGTACACT +
Preference number: 4 (lower is better)
Translates to: FLSVGSAQEEQALEMLSQTLSSG*KMMMYT
Trigger: AGTGTACATCATCATTTTCCACCCTGAACTCAATGT...TTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS CCA 90 bp GTGACGTCCCCCTCGATCCGGATTGAGTGCGGGGCGTACATCTCCTaGCCGCGCGCCGCCGCCGCCAGCGCGCACAGGAGCACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: VTSPSIRIECGAYIS*PRAAAASAHRSTSS
Trigger: GCTGGAGGTGCTCCTGTGCGCGCTGGCGGCGGCGGCGCGCGGCCAGGAGATGTACGCCCCGCACTCAATCCGGATCGAGGGGGACGTCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000440923.7
ENST00000467425.5
ENST00000486284.5
CDS GCA 90 bp GGGCCCCGCTTCACGCACCCCTCTGCCTCCCAACGGGCGCCTTCATaGCTCGCTCCGGGAATCGTCCTCCAAGCCGAGGATTTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: GPRFTHPSASQRAPS*LAPGIVLQAEDLAW
Trigger: CCAAGCCAAATCCTCGGCTTGGAGGACGATTCCCGGAGCGAGGCATGAAGGCGCCCGTTGGGAGGCAGAGGGGTGCGTGAAGCGGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS TCA 90 bp GGGCGTAGAGCATCGCTTCCAGCCTGTGGATCCCGTTTTCCCTCTTaGTGTCGCCGCAGGGCACTCCGCTGGGACCCTTGGCGTGCACGG +
Preference number: 5 (lower is better)
Translates to: GRRASLPACGSRFPS*CRRRALRWDPWRAR
Trigger: CCGTGCACGCCAAGGGTCCCAGCGGAGTGCCCTGCGGCGACATCAAGAGGGAAAACGGGATCCACAGGCTGGAAGCGATGCTCTACGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000440923.7
ENST00000467425.5
ENST00000486284.5
CDS-3UTR CAA 90 bp AGGTCGCTTGGATCCTCTAACACTGGTCTCCCGGCCGGGGAAGCTCCTCCGGTGCCCCCTCGATCCGGATaGAGTGCGGGGCGTACATCT +
Preference number: 5 (lower is better)
Translates to: RSLGSSNTGLPAGEAPPVPPRSG*SAGRTS
Trigger: AGATGTACGCCCCGCACTCAATCCGGATCGAGGGGG...CACCGGAGGAGCTTCCCCGGCCGGGAGACCAGTGTTAGAGGATCCAAGCGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AGGTCAGCCCCAAAACGGTCCTGTGGCTCTCAGTGGTCCATTCTAAAGAGCCAGCTCGCGCTCACCGGCTaGCTGCTCGCTCTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: RSAPKRSCGSQWSILKSQLALTG*LLALSN
Trigger: GTTGGAGAGAGCGAGCAGCAAGCCGGTGAGCGCGAG...CTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGACCGTTTTGGGGCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GGCCGGGGAAGCTCCTCCGGTGATGGGAAGCGGGTAGGACCAAAGAGTCCTATGACTACTTTCTCCGGCTaGACGAAAACCGGCGGTTCG +
Preference number: 5 (lower is better)
Translates to: GRGSSSGDGKRVGPKSPMTTFSG*TKTGGS
Trigger: CGAACCGCCGGTTTTCGTCAAGCCGGAGAAAGTAGT...CATAGGACTCTTTGGTCCTACCCGCTTCCCATCACCGGAGGAGCTTCCCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp TGGGGGATTCTCACGGACTGGGCAATGCAGAGTCCACCTGCCTCTTTGGAAATCACGACGGCCCTGGAGTaGGGGGTGTCCAGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: WGILTDWAMQSPPASLEITTALE*GVSRSC
Trigger: ACAGCTCCTGGACACCCCCAACTCCAGGGCCGTCGT...GATTTCCAAAGAGGCAGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CAA 90 bp GTCCTGTGGCTCTCAGTGGTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCACGACGGCCCTGGAGTaGGGGGTGTCCAGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: VLWLSVVHSKEPGRDLSFTTALE*GVSRSC
Trigger: ACAGCTCCTGGACACCCCCAACTCCAGGGCCGTCGT...GAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AGGTCGCTTGGATCCTCTAACACTGGTCTCCCGGCCGGGGAAGCTCCTCCGGTGACAATTGCAGCCGAGTaGGCAGTGCTGATGTCAGTG +
Preference number: 5 (lower is better)
Translates to: RSLGSSNTGLPAGEAPPVTIAAE*AVLMSV
Trigger: CACTGACATCAGCACTGCCAACTCGGCTGCAATTGT...CACCGGAGGAGCTTCCCCGGCCGGGAGACCAGTGTTAGAGGATCCAAGCGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GGCCGGGGAAGCTCCTCCGGTGATGGGAAGCGGGTAGGACCAAAGAGTCCTATGACGTTGGGCAGTAGGTaGGGATCACTGTTGATCTGG +
Preference number: 5 (lower is better)
Translates to: GRGSSSGDGKRVGPKSPMTLGSR*GSLLIW
Trigger: CCAGATCAACAGTGATCCCAACCTACTGCCCAACGT...CATAGGACTCTTTGGTCCTACCCGCTTCCCATCACCGGAGGAGCTTCCCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp TCCTATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCACTCCGCTGGGACCCTaGGCGTGCACGGGGAACAGC +
Preference number: 5 (lower is better)
Translates to: SYARLGDKITEGLPPPWFTPLGP*ACTGNS
Trigger: GCTGTTCCCCGTGCACGCCAAGGGTCCCAGCGGAGT...GAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp TATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCCATACCGGCGGTTCGCCGTaGGTGCAGCGCACGTCGGAG +
Preference number: 5 (lower is better)
Translates to: YARLGDKITEGLPPPWFHTGGSP*VQRTSE
Trigger: CTCCGACGTGCGCTGCACCAACGGCGAACCGCCGGT...ATGGAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS TCA 90 bp GAGGAGCCAAGATGGCCGAATACGGGTGATTTCTGCATTTCCATCTaGGGTACCGGGTTCATCTCACTAGGGAGCGCCAGACAGTGGGCG +
Preference number: 5 (lower is better)
Translates to: EEPRWPNTGDFCISI*GTGFISLGSARQWA
Trigger: CGCCCACTGTCTGGCGCTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTATTCGGCCATCTTGGCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS CCA 90 bp CTGTCCACTGCCCGATCAGACGGTAACCCGGGTTGCTGGTGTTTGTaGTCTGGTACTGAAAGATGTCATAACGCCCAGGTGCATCCCCGT +
Preference number: 5 (lower is better)
Translates to: LSTARSDGNPGCWCL*SGTERCHNAQVHPR
Trigger: ACGGGGATGCACCTGGGCGTTATGACATCTTTCAGTACCAGACCACAAACACCAGCAACCCGGGTTACCGTCTGATCGGGCAGTGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000445087.1
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS-3UTR CAA 90 bp TCCTATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCCTCGCGCTCACCGGCTaGCTGCTCGCTCTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: SYARLGDKITEGLPPPWFLALTG*LLALSN
Trigger: GTTGGAGAGAGCGAGCAGCAAGCCGGTGAGCGCGAG...GAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AGGTCGCTTGGATCCTCTAACACTGGTCTCCCGGCCGGGGAAGCTCCTCCGGTGTTTATATCCTCATCGTaGGCAAAAATCACGACGGCC +
Preference number: 5 (lower is better)
Translates to: RSLGSSNTGLPAGEAPPVFISSS*AKITTA
Trigger: GGCCGTCGTGATTTTTGCCAACGATGAGGATATAAA...CACCGGAGGAGCTTCCCCGGCCGGGAGACCAGTGTTAGAGGATCCAAGCGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AGGTCGCTTGGATCCTCTAACACTGGTCTCCCGGCCGGGGAAGCTCCTCCGGTGTGCGATAAATCCGATTaGTTTTCGTCAAGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: RSLGSSNTGLPAGEAPPVCDKSD*FSSRGL
Trigger: CAGCCCTCTTGACGAAAACAAATCGGATTTATCGCA...CACCGGAGGAGCTTCCCCGGCCGGGAGACCAGTGTTAGAGGATCCAAGCGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GGCCGGGGAAGCTCCTCCGGTGATGGGAAGCGGGTAGGACCAAAGAGTCCTATGGTTTCAACACTCCCTTaGGTAGGGAAGGTCCACAAT +
Preference number: 5 (lower is better)
Translates to: GRGSSSGDGKRVGPKSPMVSTLP*VGKVHN
Trigger: ATTGTGGACCTTCCCTACCAAAGGGAGTGTTGAAAC...CATAGGACTCTTTGGTCCTACCCGCTTCCCATCACCGGAGGAGCTTCCCCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp CAAAGTCAATGGTCCTGTCTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCAAAGCCGAGGATTTGGCTaGGGGTCTGCGTCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: QSQWSCLCVPGGFSRTGQSRGFG*GSASGR
Trigger: TCTCCCTGACGCAGACCCCAAGCCAAATCCTCGGCT...TTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CAA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATACTCCGCTGGGACCCTaGGCGTGCACGGGGAACAGC +
Preference number: 5 (lower is better)
Translates to: QCRWSVAVALLTENGVADTPLGP*ACTGNS
Trigger: GCTGTTCCCCGTGCACGCCAAGGGTCCCAGCGGAGT...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TCCTATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCGCGCCCAGCGTCACGTaGGGCAGTAGGTTGGGATCA +
Preference number: 5 (lower is better)
Translates to: SYARLGDKITEGLPPPWFAPSVT*GSRLGS
Trigger: TGATCCCAACCTACTGCCCAACGTGACGCTGGGCGC...GAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AGGTCGCTTGGATCCTCTAACACTGGTCTCCCGGCCGGGGAAGCTCCTCCGGTGCTTGCTCAGGGTTCATaGTCTTGTGTTCATCATAGT +
Preference number: 5 (lower is better)
Translates to: RSLGSSNTGLPAGEAPPVLAQGS*SCVHHS
Trigger: ACTATGATGAACACAAGACAATGAACCCTGAGCAAG...CACCGGAGGAGCTTCCCCGGCCGGGAGACCAGTGTTAGAGGATCCAAGCGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AGGTCAGCCCCAAAACGGTCCTGTGGCTCTCAGTGGTCCATTCTAAAGAGCCAGGCTGTGACTACCGCCTaGAAGCTTCGCTTCCGTTTC +
Preference number: 5 (lower is better)
Translates to: RSAPKRSCGSQWSILKSQAVTTA*KLRFRF
Trigger: GAAACGGAAGCGAAGCTTCAAGGCGGTAGTCACAGC...CTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGACCGTTTTGGGGCTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AAAGTCAATGGTCCTGTCTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCAATCTCCAAGCCGAGGATTaGGCTTGGGGTCTGCGTCAG +
Preference number: 5 (lower is better)
Translates to: KVNGPVFAFLGDSHGLGNLQAED*AWGLRQ
Trigger: CTGACGCAGACCCCAAGCCAAATCCTCGGCTTGGAG...ATTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS TCA 90 bp AGTAGGCATCAAACCCTTCCACCGTGGCTCGCTTGGGCTGAATGGTaGTGGCCCCTTCTGCGATATCTTCATGCTGGTGCAGTGGGTTTA +
Preference number: 5 (lower is better)
Translates to: SRHQTLPPWLAWAEW*WPLLRYLHAGAVGL
Trigger: TAAACCCACTGCACCAGCATGAAGATATCGCAGAAGGGGCCATCACCATTCAGCCCAAGCGAGCCACGGTGGAAGGGTTTGATGCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000461677.6
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS GCA 90 bp GCTGAAGTTCGTCTGTCCACTGCCCGATCAGACGGTAACCCGGGTTaGTGGTGTTTGTGGTCTGGTACTGAAAGATGTCATAACGCCCAG +
Preference number: 5 (lower is better)
Translates to: AEVRLSTARSDGNPG*WCLWSGTERCHNAQ
Trigger: CTGGGCGTTATGACATCTTTCAGTACCAGACCACAAACACCAGCAACCCGGGTTACCGTCTGATCGGGCAGTGGACAGACGAACTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000445087.1
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CCA 90 bp GAAGTTCGTCTGTCCACTGCCCGATCAGACGGTAACCCGGGTTGCTaGTGTTTGTGGTCTGGTACTGAAAGATGTCATAACGCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: EVRLSTARSDGNPGC*CLWSGTERCHNAQV
Trigger: CACCTGGGCGTTATGACATCTTTCAGTACCAGACCACAAACACCAGCAACCCGGGTTACCGTCTGATCGGGCAGTGGACAGACGAACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000445087.1
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS-3UTR CAA 90 bp GAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAACCGGCGGTTCGCCGTaGGTGCAGCGCACGTCGGAG +
Preference number: 5 (lower is better)
Translates to: ENGVADPCHVFLSVGSAQTGGSP*VQRTSE
Trigger: CTCCGACGTGCGCTGCACCAACGGCGAACCGCCGGT...TTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAACCGGCGGTTCGCCGTaGGTGCAGCGCACGTCGGAG +
Preference number: 5 (lower is better)
Translates to: SMSCFPKCWVSSRRTSFGTGGSP*VQRTSE
Trigger: CTCCGACGTGCGCTGCACCAACGGCGAACCGCCGGT...TCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAACCGGCGGTTCGCCGTaGGTGCAGCGCACGTCGGAG +
Preference number: 5 (lower is better)
Translates to: PCHVFLSVGSAQEEQALETGGSP*VQRTSE
Trigger: CTCCGACGTGCGCTGCACCAACGGCGAACCGCCGGT...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp AGGTCAGCCCCAAAACGGTCCTGTGGCTCTCAGTGGTCCATTCTAAAGAGCCAGAGTCCACCTGCCTCTTaGGAAATCTGCGTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: RSAPKRSCGSQWSILKSQSPPAS*EICVKD
Trigger: GTCCTTCACGCAGATTTCCAAAGAGGCAGGTGGACT...CTGGCTCTTTAGAATGGACCACTGAGAGCCACAGGACCGTTTTGGGGCTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp CTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCGAGAACCCCTCTGGCTaGCTCAGGGTTCATTGTCTT +
Preference number: 5 (lower is better)
Translates to: LPLVGKVHNCSRVGSADVENPSG*LRVHCL
Trigger: AAGACAATGAACCCTGAGCAAGCCAGAGGGGTTCTC...GACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS CCA 90 bp TGTTTGGGTCTACGTTTTCACAGAGCTCGGTCTTTGCCTCACCGTTaGGTCTGTCACTGGGTTTGTGTGACAGCCTCGATGACATGGTGG +
Preference number: 5 (lower is better)
Translates to: CLGLRFHRARSLPHR*VCHWVCVTASMTWW
Trigger: CCACCATGTCATCGAGGCTGTCACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGAAAACGTAGACCCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS-3UTR CAA 90 bp CTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAACTCCGCTGGGACCCTaGGCGTGCACGGGGAACAGC +
Preference number: 5 (lower is better)
Translates to: LTENGVADPCHVFLSVGSTPLGP*ACTGNS
Trigger: GCTGTTCCCCGTGCACGCCAAGGGTCCCAGCGGAGT...TGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAACTCCGCTGGGACCCTaGGCGTGCACGGGGAACAGC +
Preference number: 5 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQTPLGP*ACTGNS
Trigger: GCTGTTCCCCGTGCACGCCAAGGGTCCCAGCGGAGT...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TTTCCTAAAGTCCTTATCACACTGATCAGTCAAAGGGGGCATGAACAAAACCTCACTCCGCTGGGACCCTaGGCGTGCACGGGGAACAGC +
Preference number: 5 (lower is better)
Translates to: FPKVLITLISQRGHEQNLTPLGP*ACTGNS
Trigger: GCTGTTCCCCGTGCACGCCAAGGGTCCCAGCGGAGT...GAGGTTTTGTTCATGCCCCCTTTGACTGATCAGTGTGATAAGGACTTTAGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp TCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCGCGCCCAGCGTCACGTaGGGCAGTAGGTTGGGATCA +
Preference number: 5 (lower is better)
Translates to: SKTNSEPRYDIRWQSAKVAPSVT*GSRLGS
Trigger: TGATCCCAACCTACTGCCCAACGTGACGCTGGGCGC...GACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AATATTCCACCGTCTGAGAGAATAGGGCTCTATGAAAACAAGGCATTCGAAAACACCGGCGGTTCGCCGTaGGTGCAGCGCACGTCGGAG +
Preference number: 5 (lower is better)
Translates to: NIPPSERIGLYENKAFENTGGSP*VQRTSE
Trigger: CTCCGACGTGCGCTGCACCAACGGCGAACCGCCGGT...GTTTTCGAATGCCTTGTTTTCATAGAGCCCTATTCTCTCAGACGGTGGAATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp CAAAGTCAATGGTCCTGTCTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCAATCAATGGTCCTGTCTTaGCGTTCCTGGGGGATTCTC +
Preference number: 5 (lower is better)
Translates to: QSQWSCLCVPGGFSRTGQSMVLS*RSWGIL
Trigger: GAGAATCCCCCAGGAACGCAAAGACAGGACCATTGA...TTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CAA 90 bp GGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTGACTTATTACACAGAGCTCGGTCTTaGCCTCACCGTTGGGTCTGT +
Preference number: 5 (lower is better)
Translates to: GKVHNCSRVGSADVSDLLHRARS*PHRWVC
Trigger: ACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTG...TAATAAGTCACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GTGGTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTGAGCCAGGGCGGGACTaGAGTTTCAACACTCCCTTT +
Preference number: 5 (lower is better)
Translates to: VVHSKEPGRDLSFNTPFGEPGRD*SFNTPF
Trigger: AAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTC...ACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS GCA 90 bp CTCTTCCTACATCACACTGAATGCCACAGCAAGTCACCATCCACTTaGCCTCCTCTCAATTGGCCACTTGCTCTGGAGACACAACAGAGC +
Preference number: 5 (lower is better)
Translates to: LFLHHTECHSKSPST*PPLNWPLALETQQS
Trigger: GCTCTGTTGTGTCTCCAGAGCAAGTGGCCAATTGAGAGGAGGGCAAGTGGATGGTGACTTGCTGTGGCATTCAGTGTGATGTAGGAAGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS GCA 90 bp CCCAGGTATGTCTCAACCCAAAGCCTCTTCCTACATCACACTGAATaGCACAGCAAGTCACCATCCACTTGCCCTCCTCTCAATTGGCCA +
Preference number: 5 (lower is better)
Translates to: PRYVSTQSLFLHHTE*HSKSPSTCPPLNWP
Trigger: TGGCCAATTGAGAGGAGGGCAAGTGGATGGTGACTTGCTGTGGCATTCAGTGTGATGTAGGAAGAGGCTTTGGGTTGAGACATACCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS CCA 90 bp GCGTATATACTTCAGCAACTTCTTGCCTCCAGCTTGCTCCATCTCTaGGCAGACACCCCGGTAGTCAGCACAGAGATCCTTGTTCATGTG +
Preference number: 5 (lower is better)
Translates to: AYILQQLLASSLLHL*ADTPVVSTEILVHV
Trigger: CACATGAACAAGGATCTCTGTGCTGACTACCGGGGTGTCTGCCCAGAGATGGAGCAAGCTGGAGGCAAGAAGTTGCTGAAGTATATACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000445087.1
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS-3UTR CAA 90 bp GTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTAATCCCGTTTTCCCTCTaGATGTCGCCGCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: VNRGTTSDGKVQRSSQTVIPFSL*MSPQGT
Trigger: AGTGCCCTGCGGCGACATCAAGAGGGAAAACGGGAT...TACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAACGACGGCCCTGGAGTaGGGGGTGTCCAGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: ENGVADPCHVFLSVGSAQTTALE*GVSRSC
Trigger: ACAGCTCCTGGACACCCCCAACTCCAGGGCCGTCGT...TTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAACGACGGCCCTGGAGTaGGGGGTGTCCAGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: SMSCFPKCWVSSRRTSFGTTALE*GVSRSC
Trigger: ACAGCTCCTGGACACCCCCAACTCCAGGGCCGTCGT...TCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TGTCTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCAATGCAGAGTCCACCTGTTTATATCCTCATCGTaGGCAAAAATCACGACGGCC +
Preference number: 5 (lower is better)
Translates to: CLCVPGGFSRTGQCRVHLFISSS*AKITTA
Trigger: GGCCGTCGTGATTTTTGCCAACGATGAGGATATAAA...CAGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CAA 90 bp CTGGGGGATTCTCACGGACTGGGCAATGCAGAGTCCACCTGCCTCTTTGGAAATTGCAGTGGGTTTATTTaGGATCCCCAGCTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: LGDSHGLGNAESTCLFGNCSGFI*DPQLSD
Trigger: ATCAGACAGCTGGGGATCCAAAATAAACCCACTGCA...ATTTCCAAAGAGGCAGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CAA 90 bp CTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCGTTTCAACACTCCCTTaGGTAGGGAAGGTCCACAAT +
Preference number: 5 (lower is better)
Translates to: LPLVGKVHNCSRVGSADVVSTLP*VGKVHN
Trigger: ATTGTGGACCTTCCCTACCAAAGGGAGTGTTGAAAC...GACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS GCA 90 bp TTCCTTTCTGTGTCTTCTTTCTCTGTCCTGGCTTACATGGTAGTGTaGACACTGAGGCGGGTATCTCTCGGACTCCTTTACCCCACTGCA +
Preference number: 5 (lower is better)
Translates to: FLSVSSFSVLAYMVV*TLRRVSLGLLYPTA
Trigger: TGCAGTGGGGTAAAGGAGTCCGAGAGATACCCGCCTCAGTGTGCACACTACCATGTAAGCCAGGACAGAGAAAGAAGACACAGAAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS-3UTR CAA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTCTCGCGCTCACCGGCTaGCTGCTCGCTCTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: VALLTENGVADPCHVFLSLALTG*LLALSN
Trigger: GTTGGAGAGAGCGAGCAGCAAGCCGGTGAGCGCGAG...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467425.5
CDS-3UTR CAA 90 bp GTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCCCCCTCGATCCGGATaGAGTGCGGGGCGTACATCT +
Preference number: 5 (lower is better)
Translates to: VAVALLTENGVADPCHVFPPRSG*SAGRTS
Trigger: AGATGTACGCCCCGCACTCAATCCGGATCGAGGGGG...GAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GACTTGAGTTTCAACACTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTCAATGGTCCTGTCTTaGCGTTCCTGGGGGATTCTC +
Preference number: 5 (lower is better)
Translates to: DLSFNTPFGREGPQLQPSSMVLS*RSWGIL
Trigger: GAGAATCCCCCAGGAACGCAAAGACAGGACCATTGA...ACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAGTGTTGAAACTCAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AATATTCCACCGTCTGAGAGAATAGGGCTCTATGAAAACAAGGCATTCGAAAACACGACGGCCCTGGAGTaGGGGGTGTCCAGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: NIPPSERIGLYENKAFENTTALE*GVSRSC
Trigger: ACAGCTCCTGGACACCCCCAACTCCAGGGCCGTCGT...GTTTTCGAATGCCTTGTTTTCATAGAGCCCTATTCTCTCAGACGGTGGAATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTAGGTACTTCAGCAACTTCTaGCCTCCAGCTTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: VHSKEPGRDLSFNTPFGRYFSNF*PPACSI
Trigger: GATGGAGCAAGCTGGAGGCAAGAAGTTGCTGAAGTA...CCTACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTAGCTGTGACTACCGCCTaGAAGCTTCGCTTCCGTTTC +
Preference number: 5 (lower is better)
Translates to: VNRGTTSDGKVQRSSQTVAVTTA*KLRFRF
Trigger: GAAACGGAAGCGAAGCTTCAAGGCGGTAGTCACAGC...TACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp ACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAGTCTTTGCCTCACCGTaGGGTCTGTCACTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: TNSEPRYDIRWQSAKVLTVFASP*GLSLGL
Trigger: CAAACCCAGTGACAGACCCAACGGTGAGGCAAAGAC...TGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp TTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAACGGTCCTGCACAGAGCTCGGTCTTaGCCTCACCGTTGGGTCTGT +
Preference number: 5 (lower is better)
Translates to: LQPRSTYVIRQVSPKTVLHRARS*PHRWVC
Trigger: ACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTG...CAGGACCGTTTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTGAGCCAGGGCGGGACTaGAGTTTCAACACTCCCTTT +
Preference number: 5 (lower is better)
Translates to: SEPRYDIRWQSAKVLTNCEPGRD*SFNTPF
Trigger: AAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTC...ACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS GCA 90 bp CCACAGCAAGTCACCATCCACTTGCCCTCCTCTCAATTGGCCACTTaGTCTGGAGACACAACAGAGCCTATATCATTCATTCTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: PQQVTIHLPSSQLAT*SGDTTEPISFILFL
Trigger: GAGGAACAGAATGAATGATATAGGCTCTGTTGTGTCTCCAGAGCAAGTGGCCAATTGAGAGGAGGGCAAGTGGATGGTGACTTGCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS CCA 90 bp GGAAGGGTGCAAGAAAAGAACAACCTGATAGGTGCATTTGTCAGTTaGAGGATTCAGTACCAGAGGACAAGAAGCAAGGGAAGGGGGAGG +
Preference number: 5 (lower is better)
Translates to: GRVQEKNNLIGAFVS*RIQYQRTRSKGRGR
Trigger: CCTCCCCCTTCCCTTGCTTCTTGTCCTCTGGTACTGAATCCTCCAACTGACAAATGCACCTATCAGGTTGTTCTTTTCTTGCACCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS CCA 90 bp GCAAGTCACCATCCACTTGCCCTCCTCTCAATTGGCCACTTGCTCTaGAGACACAACAGAGCCTATATCATTCATTCTGTTCCTCCCTTC +
Preference number: 5 (lower is better)
Translates to: ASHHPLALLSIGHLL*RHNRAYIIHSVPPF
Trigger: GAAGGGAGGAACAGAATGAATGATATAGGCTCTGTTGTGTCTCCAGAGCAAGTGGCCAATTGAGAGGAGGGCAAGTGGATGGTGACTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS-3UTR CAA 90 bp TATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCCATACGTTGGGCAGTAGGTaGGGATCACTGTTGATCTGG +
Preference number: 5 (lower is better)
Translates to: YARLGDKITEGLPPPWFHTLGSR*GSLLIW
Trigger: CCAGATCAACAGTGATCCCAACCTACTGCCCAACGT...ATGGAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp CCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAATCGCGCCCAGCGTCACGTaGGGCAGTAGGTTGGGATCA +
Preference number: 5 (lower is better)
Translates to: PKCWVSSRRTSFGNVISIAPSVT*GSRLGS
Trigger: TGATCCCAACCTACTGCCCAACGTGACGCTGGGCGC...GATTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp AAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACTACTTTCTCCGGCTaGACGAAAACCGGCGGTTCG +
Preference number: 5 (lower is better)
Translates to: KTNSEPRYDIRWQSAKVLTTFSG*TKTGGS
Trigger: CGAACCGCCGGTTTTCGTCAAGCCGGAGAAAGTAGT...GAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp ACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAGTCCACCTGCCTCTTaGGAAATCTGCGTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: TNSEPRYDIRWQSAKVLTSPPAS*EICVKD
Trigger: GTCCTTCACGCAGATTTCCAAAGAGGCAGGTGGACT...TGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCAGGTCTGTCACTGGGTTaGTGTGACAGCCTCGATGAC +
Preference number: 5 (lower is better)
Translates to: KQTVNRGTTSDGKVQRSSGLSLG*CDSLDD
Trigger: GTCATCGAGGCTGTCACACAAACCCAGTGACAGACC...TGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp TTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAACGGTCCTGGTCTTTGCCTCACCGTaGGGTCTGTCACTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: LQPRSTYVIRQVSPKTVLVFASP*GLSLGL
Trigger: CAAACCCAGTGACAGACCCAACGGTGAGGCAAAGAC...CAGGACCGTTTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GACTTGAGTTTCAACACTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTAGCTGTTTAGGTCGCTaGGATCCTCTAACACTGGTC +
Preference number: 5 (lower is better)
Translates to: DLSFNTPFGREGPQLQPSSCLGR*DPLTLV
Trigger: GACCAGTGTTAGAGGATCCAAGCGACCTAAACAGCT...ACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAGTGTTGAAACTCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTAACAATTGCAGCCGAGTaGGCAGTGCTGATGTCAGTG +
Preference number: 5 (lower is better)
Translates to: VNRGTTSDGKVQRSSQTVTIAAE*AVLMSV
Trigger: CACTGACATCAGCACTGCCAACTCGGCTGCAATTGT...TACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS CCA 90 bp ACTGAATGCCACAGCAAGTCACCATCCACTTGCCCTCCTCTCAATTaGCCACTTGCTCTGGAGACACAACAGAGCCTATATCATTCATTC +
Preference number: 5 (lower is better)
Translates to: TECHSKSPSTCPPLN*PLALETQQSLYHSF
Trigger: GAATGAATGATATAGGCTCTGTTGTGTCTCCAGAGCAAGTGGCCAATTGAGAGGAGGGCAAGTGGATGGTGACTTGCTGTGGCATTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS-3UTR CAA 90 bp GTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCATCCCGTTTTCCCTCTaGATGTCGCCGCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: VAVALLTENGVADPCHVFIPFSL*MSPQGT
Trigger: AGTGCCCTGCGGCGACATCAAGAGGGAAAACGGGAT...GAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGATCCCGTTTTCCCTCTaGATGTCGCCGCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: DPCHVFLSVGSAQEEQALIPFSL*MSPQGT
Trigger: AGTGCCCTGCGGCGACATCAAGAGGGAAAACGGGAT...CAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATCCCGTTTTCCCTCTaGATGTCGCCGCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: PCHVFLSVGSAQEEQALEIPFSL*MSPQGT
Trigger: AGTGCCCTGCGGCGACATCAAGAGGGAAAACGGGAT...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TTTCCTAAAGTCCTTATCACACTGATCAGTCAAAGGGGGCATGAACAAAACCTCATCCCGTTTTCCCTCTaGATGTCGCCGCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: FPKVLITLISQRGHEQNLIPFSL*MSPQGT
Trigger: AGTGCCCTGCGGCGACATCAAGAGGGAAAACGGGAT...GAGGTTTTGTTCATGCCCCCTTTGACTGATCAGTGTGATAAGGACTTTAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp CATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTAGCGCCCAGCGTCACGTaGGGCAGTAGGTTGGGATCA +
Preference number: 5 (lower is better)
Translates to: HVFLSVGSAQEEQALEMLAPSVT*GSRLGS
Trigger: TGATCCCAACCTACTGCCCAACGTGACGCTGGGCGC...TAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp AATGGCCAACTTGGTCAGCTCTTTTGGCTGCTGCAAGGATCTGCTTTATATCCTAGTCCACCTGCCTCTTaGGAAATCTGCGTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: NGQLGQLFWLLQGSALYPSPPAS*EICVKD
Trigger: GTCCTTCACGCAGATTTCCAAAGAGGCAGGTGGACT...AGGATATAAAGCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAGTTGGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CAA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATTCAATGGTCCTGTCTTaGCGTTCCTGGGGGATTCTC +
Preference number: 5 (lower is better)
Translates to: QCRWSVAVALLTENGVADSMVLS*RSWGIL
Trigger: GAGAATCCCCCAGGAACGCAAAGACAGGACCATTGA...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TCCTATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCTGCAGTGGGTTTATTTaGGATCCCCAGCTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: SYARLGDKITEGLPPPWFCSGFI*DPQLSD
Trigger: ATCAGACAGCTGGGGATCCAAAATAAACCCACTGCA...GAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTAGGCCACTAATCGTCAACTaGCAGTTGAAGTTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: VHSKEPGRDLSFNTPFGRPLIVN*QLKFSS
Trigger: GGAGGAAAACTTCAACTGCAAGTTGACGATTAGTGG...CCTACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp CTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCGTGCCAGCACTACCATaGAAATTAACATTGCGTATA +
Preference number: 5 (lower is better)
Translates to: LPLVGKVHNCSRVGSADVVPALP*KLTLRI
Trigger: TATACGCAATGTTAATTTCAATGGTAGTGCTGGCAC...GACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp TATTTCATAAAGCAGCTGTTTAGGTCGCTTGGATCCTCTAACACTGGTCTCCCGCCGGGTTGCTGGTGTTaGTGGTCTGGTACTGAAAGA +
Preference number: 5 (lower is better)
Translates to: YFIKQLFRSLGSSNTGLPPGCWC*WSGTER
Trigger: TCTTTCAGTACCAGACCACAAACACCAGCAACCCGG...CGGGAGACCAGTGTTAGAGGATCCAAGCGACCTAAACAGCTGCTTTATGAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACCGGGTTGCTGGTGTTaGTGGTCTGGTACTGAAAGA +
Preference number: 5 (lower is better)
Translates to: KQTVNRGTTSDGKVQRSSPGCWC*WSGTER
Trigger: TCTTTCAGTACCAGACCACAAACACCAGCAACCCGG...TGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp TTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAACGGTCCTGGAGAACCCCTCTGGCTaGCTCAGGGTTCATTGTCTT +
Preference number: 5 (lower is better)
Translates to: LQPRSTYVIRQVSPKTVLENPSG*LRVHCL
Trigger: AAGACAATGAACCCTGAGCAAGCCAGAGGGGTTCTC...CAGGACCGTTTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp CTCCCTTTGGTAGGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCCAAGGAGCAAATGATTaGGAGATCTGTAATGTCACA +
Preference number: 5 (lower is better)
Translates to: LPLVGKVHNCSRVGSADVQGAND*EICNVT
Trigger: TGTGACATTACAGATCTCCAAATCATTTGCTCCTTG...GACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCTACCAAAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTAGGTACACCCCGAGTCTaGATGGCATACACAGTACAT +
Preference number: 5 (lower is better)
Translates to: VNRGTTSDGKVQRSSQTVGTPRV*MAYTVH
Trigger: ATGTACTGTGTATGCCATCAAGACTCGGGGTGTACC...TACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp ACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAGGTACACCCCGAGTCTaGATGGCATACACAGTACAT +
Preference number: 5 (lower is better)
Translates to: TNSEPRYDIRWQSAKVLTGTPRV*MAYTVH
Trigger: ATGTACTGTGTATGCCATCAAGACTCGGGGTGTACC...TGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCGGTCTGTCACTGGGTTaGTGTGACAGCCTCGATGAC +
Preference number: 5 (lower is better)
Translates to: VISILFVQAEVLRGYFDSGLSLG*CDSLDD
Trigger: GTCATCGAGGCTGTCACACAAACCCAGTGACAGACC...GGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAACACAGAGCTCGGTCTTaGCCTCACCGTTGGGTCTGT +
Preference number: 5 (lower is better)
Translates to: PCHVFLSVGSAQEEQALEHRARS*PHRWVC
Trigger: ACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTG...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTACACAGAGCTCGGTCTTaGCCTCACCGTTGGGTCTGT +
Preference number: 5 (lower is better)
Translates to: AVALLTENGVADPCHVFLHRARS*PHRWVC
Trigger: ACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTG...TAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCACAGAGCTCGGTCTTaGCCTCACCGTTGGGTCTGT +
Preference number: 5 (lower is better)
Translates to: VAVALLTENGVADPCHVFHRARS*PHRWVC
Trigger: ACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTG...GAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp AAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGGGAAGGTCCACAATaGCAGCCGAGTTGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: KTRHSKTNSEPRYDIRWQREGPQ*QPSWQC
Trigger: GCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCT...TTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS GCA 90 bp GATGCACATACCCAAGCCCAAGAAAACTCGCCGGAAAGAACACACTaGCACATCTGGTTTGGCAATCATCAGGAAAGTGATGATGTAGCA +
Preference number: 5 (lower is better)
Translates to: DAHTQAQENSPERTH*HIWFGNHQESDDVA
Trigger: TGCTACATCATCACTTTCCTGATGATTGCCAAACCAGATGTGGCAGTGTGTTCTTTCCGGCGAGTTTTCTTGGGCTTGGGTATGTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS-3UTR CAA 90 bp GTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCACTACTTTCTCCGGCTaGACGAAAACCGGCGGTTCG +
Preference number: 5 (lower is better)
Translates to: VAVALLTENGVADPCHVFTTFSG*TKTGGS
Trigger: CGAACCGCCGGTTTTCGTCAAGCCGGAGAAAGTAGT...GAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp CTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAACTACTTTCTCCGGCTaGACGAAAACCGGCGGTTCG +
Preference number: 5 (lower is better)
Translates to: LTENGVADPCHVFLSVGSTTFSG*TKTGGS
Trigger: CGAACCGCCGGTTTTCGTCAAGCCGGAGAAAGTAGT...TGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTAGTCCACCTGCCTCTTaGGAAATCTGCGTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: ADPCHVFLSVGSAQEEQASPPAS*EICVKD
Trigger: GTCCTTCACGCAGATTTCCAAAGAGGCAGGTGGACT...AGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTCAATGGTCCTGTCTTaGCGTTCCTGGGGGATTCTC +
Preference number: 5 (lower is better)
Translates to: ADPCHVFLSVGSAQEEQASMVLS*RSWGIL
Trigger: GAGAATCCCCCAGGAACGCAAAGACAGGACCATTGA...AGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAATCAATGGTCCTGTCTTaGCGTTCCTGGGGGATTCTC +
Preference number: 5 (lower is better)
Translates to: GVADPCHVFLSVGSAQEESMVLS*RSWGIL
Trigger: GAGAATCCCCCAGGAACGCAAAGACAGGACCATTGA...TTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TCAAAGTCAATGGTCCTGTCTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCAGTGTCCAGGAGCTGTTaGATAATTCTATCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: SKSMVLSLRSWGILTDWAVSRSC*IILSKS
Trigger: TGACTTTGATAGAATTATCAAACAGCTCCTGGACAC...TGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAGACAGGACCATTGACTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CAA 90 bp GTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTAAAGAAAATGGCCAACTaGGTCAGCTCTTTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: VNRGTTSDGKVQRSSQTVKKMAN*VSSFGC
Trigger: GCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCTT...TACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTTGCAGTGGGTTTATTTaGGATCCCCAGCTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: SEPRYDIRWQSAKVLTNCCSGFI*DPQLSD
Trigger: ATCAGACAGCTGGGGATCCAAAATAAACCCACTGCA...ACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp TTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAACGGTCCTGGGTGCATCCCCGTTCTaGTTAAACATCACTGGAGTG +
Preference number: 5 (lower is better)
Translates to: LQPRSTYVIRQVSPKTVLGASPF*LNITGV
Trigger: CACTCCAGTGATGTTTAACAAGAACGGGGATGCACC...CAGGACCGTTTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AGCTTTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTCCGGGTTGCTGGTGTTaGTGGTCTGGTACTGAAAGA +
Preference number: 5 (lower is better)
Translates to: SFGNVISILFVQAEVLRGPGCWC*WSGTER
Trigger: TCTTTCAGTACCAGACCACAAACACCAGCAACCCGG...ACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCGAGTGCCACTCCAGTTaGATGATGGGAATATCCTGG +
Preference number: 5 (lower is better)
Translates to: SKTNSEPRYDIRWQSAKVECHSS*MMGISW
Trigger: CCAGGATATTCCCATCATCAAACTGGAGTGGCACTC...GACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTACTGCCACATCTGGTTaGGCAATCATCAGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: SEPRYDIRWQSAKVLTNCTATSG*AIIRKV
Trigger: CACTTTCCTGATGATTGCCAAACCAGATGTGGCAGT...ACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAGCTGTGACTACCGCCTaGAAGCTTCGCTTCCGTTTC +
Preference number: 5 (lower is better)
Translates to: AVALLTENGVADPCHVFLAVTTA*KLRFRF
Trigger: GAAACGGAAGCGAAGCTTCAAGGCGGTAGTCACAGC...TAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTGTGACTACCGCCTaGAAGCTTCGCTTCCGTTTC +
Preference number: 5 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQAVTTA*KLRFRF
Trigger: GAAACGGAAGCGAAGCTTCAAGGCGGTAGTCACAGC...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp ATGAAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGGGTCTGTCACTGGGTTaGTGTGACAGCCTCGATGAC +
Preference number: 5 (lower is better)
Translates to: MKTRHSKTNSEPRYDIRWGLSLG*CDSLDD
Trigger: GTCATCGAGGCTGTCACACAAACCCAGTGACAGACC...CCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp CTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGGTCTGTCACTGGGTTaGTGTGACAGCCTCGATGAC +
Preference number: 5 (lower is better)
Translates to: LTENGVADPCHVFLSVGSGLSLG*CDSLDD
Trigger: GTCATCGAGGCTGTCACACAAACCCAGTGACAGACC...TGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp CTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGTCTTTGCCTCACCGTaGGGTCTGTCACTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: LTENGVADPCHVFLSVGSVFASP*GLSLGL
Trigger: CAAACCCAGTGACAGACCCAACGGTGAGGCAAAGAC...TGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGTCTTTGCCTCACCGTaGGGTCTGTCACTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: GNVISILFVQAEVLRGYFVFASP*GLSLGL
Trigger: CAAACCCAGTGACAGACCCAACGGTGAGGCAAAGAC...AAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGTCTTTGCCTCACCGTaGGGTCTGTCACTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: ENGVADPCHVFLSVGSAQVFASP*GLSLGL
Trigger: CAAACCCAGTGACAGACCCAACGGTGAGGCAAAGAC...TTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp AAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCATTGCAGCAGGGCTGTTaGGGTCTACGTTTTCACAGA +
Preference number: 5 (lower is better)
Translates to: KQTVNRGTTSDGKVQRSSLQQGC*GLRFHR
Trigger: TCTGTGAAAACGTAGACCCAAACAGCCCTGCTGCAA...TGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357716.9
CDS-3UTR CAA 90 bp TTCAAAACCTTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAAGGGAAGGTCCACAATaGCAGCCGAGTTGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: FKTLQPRSTYVIRQVSPKREGPQ*QPSWQC
Trigger: GCACTGCCAACTCGGCTGCAATTGTGGACCTTCCCT...TTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAAGGTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp TTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAACGGTCCTGTTTGCAGCAGGGCCTTaGGGAAAGCAGTCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: LQPRSTYVIRQVSPKTVLFAAGP*GKQSKA
Trigger: AGCTTTTGACTGCTTTCCCAAAGGCCCTGCTGCAAA...CAGGACCGTTTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486284.5
CDS CCA 90 bp ACCCCACTGCATGTCTTCTATACTACTAAGGGTACTACGATGTCCTaGAAGGACTTTCCATGCCAACATTCTGTAGCAGGCACAAATGGT +
Preference number: 5 (lower is better)
Translates to: TPLHVFYTTKGTTMS*KDFPCQHSVAGTNG
Trigger: ACCATTTGTGCCTGCTACAGAATGTTGGCATGGAAAGTCCTTCCAGGACATCGTAGTACCCTTAGTAGTATAGAAGACATGCAGTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458641.2
CDS-3UTR CAA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAACGTTGGGCAGTAGGTaGGGATCACTGTTGATCTGG +
Preference number: 5 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQTLGSR*GSLLIW
Trigger: CCAGATCAACAGTGATCCCAACCTACTGCCCAACGT...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAAGTCCACCTGCCTCTTaGGAAATCTGCGTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQSPPAS*EICVKD
Trigger: GTCCTTCACGCAGATTTCCAAAGAGGCAGGTGGACT...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp AAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAATCAATGGTCCTGTCTTaGCGTTCCTGGGGGATTCTC +
Preference number: 5 (lower is better)
Translates to: KTRHSKTNSEPRYDIRWQSMVLS*RSWGIL
Trigger: GAGAATCCCCCAGGAACGCAAAGACAGGACCATTGA...TTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GTGGTCCATTCTAAAGAGCCAGGGCGGGACTTGAGTTTCAACACTCCCTTTGGTCATACATTTCTTCTGTaGTTTTCAAGTGTACGGGAC +
Preference number: 5 (lower is better)
Translates to: VVHSKEPGRDLSFNTPFGHTFLL*FSSVRD
Trigger: GTCCCGTACACTTGAAAACAACAGAAGAAATGTATG...ACCAAAGGGAGTGTTGAAACTCAAGTCCCGCCCTGGCTCTTTAGAATGGACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp CAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAACCACTAATCGTCAACTaGCAGTTGAAGTTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: QTVNRGTTSDGKVQRSSQPLIVN*QLKFSS
Trigger: GGAGGAAAACTTCAACTGCAAGTTGACGATTAGTGG...TTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAAGAGTGCCACTCCAGTTaGATGATGGGAATATCCTGG +
Preference number: 5 (lower is better)
Translates to: GVADPCHVFLSVGSAQEEECHSS*MMGISW
Trigger: CCAGGATATTCCCATCATCAAACTGGAGTGGCACTC...TTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TATTTCATAAAGCAGCTGTTTAGGTCGCTTGGATCCTCTAACACTGGTCTCCCGACTGCCACATCTGGTTaGGCAATCATCAGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: YFIKQLFRSLGSSNTGLPTATSG*AIIRKV
Trigger: CACTTTCCTGATGATTGCCAAACCAGATGTGGCAGT...CGGGAGACCAGTGTTAGAGGATCCAAGCGACCTAAACAGCTGCTTTATGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTATGCGATAAATCCGATTaGTTTTCGTCAAGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: VNRGTTSDGKVQRSSQTVCDKSD*FSSRGL
Trigger: CAGCCCTCTTGACGAAAACAAATCGGATTTATCGCA...TACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTGACTTATTACTTGCTCAGGGTTCATaGTCTTGTGTTCATCATAGT +
Preference number: 5 (lower is better)
Translates to: GKVHNCSRVGSADVSDLLLAQGS*SCVHHS
Trigger: ACTATGATGAACACAAGACAATGAACCCTGAGCAAG...TAATAAGTCACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp TTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTGAGAACCCCTCTGGCTaGCTCAGGGTTCATTGTCTT +
Preference number: 5 (lower is better)
Translates to: LEMLSQSSLCKLRSSEVTENPSG*LRVHCL
Trigger: AAGACAATGAACCCTGAGCAAGCCAGAGGGGTTCTC...AGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp CTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGAGAACCCCTCTGGCTaGCTCAGGGTTCATTGTCTT +
Preference number: 5 (lower is better)
Translates to: LTENGVADPCHVFLSVGSENPSG*LRVHCL
Trigger: AAGACAATGAACCCTGAGCAAGCCAGAGGGGTTCTC...TGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTGGTACACCCCGAGTCTaGATGGCATACACAGTACAT +
Preference number: 5 (lower is better)
Translates to: ADPCHVFLSVGSAQEEQAGTPRV*MAYTVH
Trigger: ATGTACTGTGTATGCCATCAAGACTCGGGGTGTACC...AGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTAGTGAATCCAATGGGCTaGGCTTCGTTAAAATTCTCG +
Preference number: 5 (lower is better)
Translates to: VNRGTTSDGKVQRSSQTVVNPMG*ASLKFS
Trigger: CGAGAATTTTAACGAAGCCAAGCCCATTGGATTCAC...TACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTTGTAAGCGTGGTAGTTaGTATGTAGAGCTTTTCCGC +
Preference number: 5 (lower is better)
Translates to: SEPRYDIRWQSAKVLTNCCKRGS*YVELFR
Trigger: GCGGAAAAGCTCTACATACAAACTACCACGCTTACA...ACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGGTCTGTCACTGGGTTaGTGTGACAGCCTCGATGAC +
Preference number: 5 (lower is better)
Translates to: VALLTENGVADPCHVFLSGLSLG*CDSLDD
Trigger: GTCATCGAGGCTGTCACACAAACCCAGTGACAGACC...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TGGGAAGCGGGTAGGACCAAAGAGTCCTATGCCAGGTTGGGTGACAAAATAACTACTGGTGGTATACAGTaGTTTGGGTCTACGTTTTCA +
Preference number: 5 (lower is better)
Translates to: WEAGRTKESYARLGDKITTGGIQ*FGSTFS
Trigger: TGAAAACGTAGACCCAAACAACTGTATACCACCAGT...AGTTATTTTGTCACCCAACCTGGCATAGGACTCTTTGGTCCTACCCGCTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486284.5
CDS GCA 90 bp TGTTGCCTTAGCAGGAAGGGTGCAAGAAAAGAACAACCTGATAGGTaGATTTGTCAGTTGGAGGATTCAGTACCAGAGGACAAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: CCLSRKGARKEQPDR*ICQLEDSVPEDKKQ
Trigger: TTGCTTCTTGTCCTCTGGTACTGAATCCTCCAACTGACAAATGCACCTATCAGGTTGTTCTTTTCTTGCACCCTTCCTGCTAAGGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS CCA 90 bp ACCCAAGCCCAAGAAAACTCGCCGGAAAGAACACACTGCCACATCTaGTTTGGCAATCATCAGGAAAGTGATGATGTAGCAAAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: TQAQENSPERTHCHI*FGNHQESDDVAKKD
Trigger: ATCTTTCTTTGCTACATCATCACTTTCCTGATGATTGCCAAACCAGATGTGGCAGTGTGTTCTTTCCGGCGAGTTTTCTTGGGCTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS-3UTR CAA 90 bp AAAGAAAATGGCCAACTTGGTCAGCTCTTTTGGCTGCTGCAAGGATCTGCTTTAAAGAAAATGGCCAACTaGGTCAGCTCTTTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: KENGQLGQLFWLLQGSALKKMAN*VSSFGC
Trigger: GCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCTT...TAAAGCAGATCCTTGCAGCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS-3UTR CAA 90 bp GCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTAAGAAAATGGCCAACTaGGTCAGCTCTTTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: ADPCHVFLSVGSAQEEQAKKMAN*VSSFGC
Trigger: GCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCTT...AGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTACTTCAGCAACTTCTaGCCTCCAGCTTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: SVAVALLTENGVADPCHVYFSNF*PPACSI
Trigger: GATGGAGCAAGCTGGAGGCAAGAAGTTGCTGAAGTA...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GGGAAGGTCCACAATTGCAGCCGAGTTGGCAGTGCTGATGTCAGTGACTTATTAGTGCCAGCACTACCATaGAAATTAACATTGCGTATA +
Preference number: 5 (lower is better)
Translates to: GKVHNCSRVGSADVSDLLVPALP*KLTLRI
Trigger: TATACGCAATGTTAATTTCAATGGTAGTGCTGGCAC...TAATAAGTCACTGACATCAGCACTGCCAACTCGGCTGCAATTGTGGACCTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp TTTCCTAAAGTCCTTATCACACTGATCAGTCAAAGGGGGCATGAACAAAACCTCGGTGCATCCCCGTTCTaGTTAAACATCACTGGAGTG +
Preference number: 5 (lower is better)
Translates to: FPKVLITLISQRGHEQNLGASPF*LNITGV
Trigger: CACTCCAGTGATGTTTAACAAGAACGGGGATGCACC...GAGGTTTTGTTCATGCCCCCTTTGACTGATCAGTGTGATAAGGACTTTAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGGTGCATCCCCGTTCTaGTTAAACATCACTGGAGTG +
Preference number: 5 (lower is better)
Translates to: DPCHVFLSVGSAQEEQALGASPF*LNITGV
Trigger: CACTCCAGTGATGTTTAACAAGAACGGGGATGCACC...CAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TTTCCTAAAGTCCTTATCACACTGATCAGTCAAAGGGGGCATGAACAAAACCTCGAGTGCCACTCCAGTTaGATGATGGGAATATCCTGG +
Preference number: 5 (lower is better)
Translates to: FPKVLITLISQRGHEQNLECHSS*MMGISW
Trigger: CCAGGATATTCCCATCATCAAACTGGAGTGGCACTC...GAGGTTTTGTTCATGCCCCCTTTGACTGATCAGTGTGATAAGGACTTTAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGAGTGCCACTCCAGTTaGATGATGGGAATATCCTGG +
Preference number: 5 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQECHSS*MMGISW
Trigger: CCAGGATATTCCCATCATCAAACTGGAGTGGCACTC...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTGAGTGCCACTCCAGTTaGATGATGGGAATATCCTGG +
Preference number: 5 (lower is better)
Translates to: LSQSSLCKLRSSEVTLIPECHSS*MMGISW
Trigger: CCAGGATATTCCCATCATCAAACTGGAGTGGCACTC...AGGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAAACTGCCACATCTGGTTaGGCAATCATCAGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: GVADPCHVFLSVGSAQEETATSG*AIIRKV
Trigger: CACTTTCCTGATGATTGCCAAACCAGATGTGGCAGT...TTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTGGTACACCCCGAGTCTaGATGGCATACACAGTACAT +
Preference number: 5 (lower is better)
Translates to: SVAVALLTENGVADPCHVGTPRV*MAYTVH
Trigger: ATGTACTGTGTATGCCATCAAGACTCGGGGTGTACC...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TATTTCATAAAGCAGCTGTTTAGGTCGCTTGGATCCTCTAACACTGGTCTCCCGTGTAAGCGTGGTAGTTaGTATGTAGAGCTTTTCCGC +
Preference number: 5 (lower is better)
Translates to: YFIKQLFRSLGSSNTGLPCKRGS*YVELFR
Trigger: GCGGAAAAGCTCTACATACAAACTACCACGCTTACA...CGGGAGACCAGTGTTAGAGGATCCAAGCGACCTAAACAGCTGCTTTATGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATTGTAAGCGTGGTAGTTaGTATGTAGAGCTTTTCCGC +
Preference number: 5 (lower is better)
Translates to: QCRWSVAVALLTENGVADCKRGS*YVELFR
Trigger: GCGGAAAAGCTCTACATACAAACTACCACGCTTACA...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTGCTGTGACTACCGCCTaGAAGCTTCGCTTCCGTTTC +
Preference number: 5 (lower is better)
Translates to: SCFPKCWVSSRRTSFGNVAVTTA*KLRFRF
Trigger: GAAACGGAAGCGAAGCTTCAAGGCGGTAGTCACAGC...AACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GCAGCTTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAACATCTCACTTTGAGAAGACTACCTaGGCTGTGATCACGTTCTCC +
Preference number: 5 (lower is better)
Translates to: AASSIFGQFQGSNMITSHFEKTT*AVITFS
Trigger: GGAGAACGTGATCACAGCCAAGGTAGTCTTCTCAAA...GTGAGATGTTATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS-3UTR CAA 90 bp GCTTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAACATCTCACTGCCAGCTTCTTCCATTTTaGGACAGTTCCAGGGGTCAA +
Preference number: 5 (lower is better)
Translates to: ASSIFGQFQGSNMITSHCQLLPF*DSSRGQ
Trigger: TTGACCCCTGGAACTGTCCAAAAATGGAAGAAGCTG...GCAGTGAGATGTTATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS TCA 90 bp AAACTCTTCTCCAGTGGTATGGTAGATATGTTTTTCCCCACAGTATaGTGCCGTTATCATGGTAGTGTCTGGCCCTGTGTACCTGGATTT +
Preference number: 5 (lower is better)
Translates to: KLFSSGMVDMFFPTV*CRYHGSVWPCVPGF
Trigger: AAATCCAGGTACACAGGGCCAGACACTACCATGATAACGGCATCATACTGTGGGGAAAAACATATCTACCATACCACTGGAGAAGAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS-3UTR CAA 90 bp CATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTAACGTTGGGCAGTAGGTaGGGATCACTGTTGATCTGG +
Preference number: 5 (lower is better)
Translates to: HVFLSVGSAQEEQALEMLTLGSR*GSLLIW
Trigger: CCAGATCAACAGTGATCCCAACCTACTGCCCAACGT...TAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATACGTTGGGCAGTAGGTaGGGATCACTGTTGATCTGG +
Preference number: 5 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNTLGSR*GSLLIW
Trigger: CCAGATCAACAGTGATCCCAACCTACTGCCCAACGT...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCAGTCCACCTGCCTCTTaGGAAATCTGCGTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: CFPKCWVSSRRTSFGNVISPPAS*EICVKD
Trigger: GTCCTTCACGCAGATTTCCAAAGAGGCAGGTGGACT...GATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp ATGAAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGAAGAAAATGGCCAACTaGGTCAGCTCTTTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: MKTRHSKTNSEPRYDIRWKKMAN*VSSFGC
Trigger: GCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCTT...CCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAAAGAAAATGGCCAACTaGGTCAGCTCTTTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQKKMAN*VSSFGC
Trigger: GCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCTT...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp ACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTAAGAAAATGGCCAACTaGGTCAGCTCTTTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: TENGVADPCHVFLSVGSAKKMAN*VSSFGC
Trigger: GCAGCCAAAAGAGCTGACCAAGTTGGCCATTTTCTT...AGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGATGCAGTGGGTTTATTTaGGATCCCCAGCTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: SMSCFPKCWVSSRRTSFGCSGFI*DPQLSD
Trigger: ATCAGACAGCTGGGGATCCAAAATAAACCCACTGCA...TCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTTGCAGTGGGTTTATTTaGGATCCCCAGCTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: LSQSSLCKLRSSEVTLIPCSGFI*DPQLSD
Trigger: ATCAGACAGCTGGGGATCCAAAATAAACCCACTGCA...AGGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp AGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACAAACTGTCATACATTTCTTCTGTaGTTTTCAAGTGTACGGGAC +
Preference number: 5 (lower is better)
Translates to: SEPRYDIRWQSAKVLTNCHTFLL*FSSVRD
Trigger: GTCCCGTACACTTGAAAACAACAGAAGAAATGTATG...ACAGTTTGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCAATCGTCAACTTGCAGTaGAAGTTTTCCTCCCAGTAT +
Preference number: 5 (lower is better)
Translates to: KQTVNRGTTSDGKVQRSSIVNLQ*KFSSQY
Trigger: ATACTGGGAGGAAAACTTCAACTGCAAGTTGACGAT...TGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp CCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAATCTACTTCAGCAACTTCTaGCCTCCAGCTTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: PKCWVSSRRTSFGNVISIYFSNF*PPACSI
Trigger: GATGGAGCAAGCTGGAGGCAAGAAGTTGCTGAAGTA...GATTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGGTGCATCCCCGTTCTaGTTAAACATCACTGGAGTG +
Preference number: 5 (lower is better)
Translates to: VALLTENGVADPCHVFLSGASPF*LNITGV
Trigger: CACTCCAGTGATGTTTAACAAGAACGGGGATGCACC...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCCCGGGTTGCTGGTGTTaGTGGTCTGGTACTGAAAGA +
Preference number: 5 (lower is better)
Translates to: CFPKCWVSSRRTSFGNVIPGCWC*WSGTER
Trigger: TCTTTCAGTACCAGACCACAAACACCAGCAACCCGG...GATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATCCGGGTTGCTGGTGTTaGTGGTCTGGTACTGAAAGA +
Preference number: 5 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNPGCWC*WSGTER
Trigger: TCTTTCAGTACCAGACCACAAACACCAGCAACCCGG...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAACTGCCACATCTGGTTaGGCAATCATCAGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: ENGVADPCHVFLSVGSAQTATSG*AIIRKV
Trigger: CACTTTCCTGATGATTGCCAAACCAGATGTGGCAGT...TTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAACTGCCACATCTGGTTaGGCAATCATCAGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: NGVADPCHVFLSVGSAQETATSG*AIIRKV
Trigger: CACTTTCCTGATGATTGCCAAACCAGATGTGGCAGT...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTGCGATAAATCCGATTaGTTTTCGTCAAGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: VISILFVQAEVLRGYFDSCDKSD*FSSRGL
Trigger: CAGCCCTCTTGACGAAAACAAATCGGATTTATCGCA...GGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGAGAACCCCTCTGGCTaGCTCAGGGTTCATTGTCTT +
Preference number: 5 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNENPSG*LRVHCL
Trigger: AAGACAATGAACCCTGAGCAAGCCAGAGGGGTTCTC...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp ACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCCTCACACAAGGAGCAAATGATTaGGAGATCTGTAATGTCACA +
Preference number: 5 (lower is better)
Translates to: TNSEPRYDIRWQSAKVLTQGAND*EICNVT
Trigger: TGTGACATTACAGATCTCCAAATCATTTGCTCCTTG...TGTGAGGACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp AATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATGGTACACCCCGAGTCTaGATGGCATACACAGTACAT +
Preference number: 5 (lower is better)
Translates to: NVISILFVQAEVLRGYFDGTPRV*MAYTVH
Trigger: ATGTACTGTGTATGCCATCAAGACTCGGGGTGTACC...ATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp AAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAGAGTCCTATGCCAGGTaGGGTGACAAAATAACTGAG +
Preference number: 5 (lower is better)
Translates to: KTRHSKTNSEPRYDIRWQESYAR*GDKITE
Trigger: CTCAGTTATTTTGTCACCCAACCTGGCATAGGACTC...TTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp TTCAAAACCTTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAAGCTGTTTAGGTCGCTaGGATCCTCTAACACTGGTC +
Preference number: 5 (lower is better)
Translates to: FKTLQPRSTYVIRQVSPKSCLGR*DPLTLV
Trigger: GACCAGTGTTAGAGGATCCAAGCGACCTAAACAGCT...TTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAAGGTTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTATCTCAATCCTCTTaGTGCAAGCTGAGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: ADPCHVFLSVGSAQEEQALSQSS*CKLRSS
Trigger: TGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAA...AGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TATGCCAGGTTGGGTGACAAAATAACTGAGGGTCTTCCTCCTCCATGGTTCCATCCAAGTAACAGACTTTaGTACACTCTTTCTTACTGG +
Preference number: 5 (lower is better)
Translates to: YARLGDKITEGLPPPWFHPSNRL*YTLSYW
Trigger: CCAGTAAGAAAGAGTGTACAAAAGTCTGTTACTTGG...ATGGAACCATGGAGGAGGAAGACCCTCAGTTATTTTGTCACCCAACCTGGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486284.5
CDS TCA 90 bp ATGTTGGGTGGATCAACACCAAACCAAATGAACACCCCTAGAAGCTaGACTGATATTAAACTGGAAGTGATTGCCAGTTGTGATGTTGGG +
Preference number: 5 (lower is better)
Translates to: MLGGSTPNQMNTPRS*TDIKLEVIASCDVG
Trigger: CCCAACATCACAACTGGCAATCACTTCCAGTTTAATATCAGTTCAGCTTCTAGGGGTGTTCATTTGGTTTGGTGTTGATCCACCCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CCA 90 bp TTGCAGCAGGGCCTTTGGGAAAGCAGTCAAAAGCTATACTGTTGGTaGGATAGTGTACCAAGTAACAGACTTTTGTACACTCTTTCTTAC +
Preference number: 5 (lower is better)
Translates to: LQQGLWESSQKLYCW*DSVPSNRLLYTLSY
Trigger: GTAAGAAAGAGTGTACAAAAGTCTGTTACTTGGTACACTATCCCACCAACAGTATAGCTTTTGACTGCTTTCCCAAAGGCCCTGCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486284.5
CDS-3UTR CAA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATGTGTCCAGGAGCTGTTaGATAATTCTATCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: QCRWSVAVALLTENGVADVSRSC*IILSKS
Trigger: TGACTTTGATAGAATTATCAAACAGCTCCTGGACAC...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAAGTGCAAAGGTCGTGTCCAGGAGCTGTTaGATAATTCTATCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: SKTNSEPRYDIRWQSAKVVSRSC*IILSKS
Trigger: TGACTTTGATAGAATTATCAAACAGCTCCTGGACAC...GACCTTTGCACTTTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAATTTATATCCTCATCGTaGGCAAAAATCACGACGGCC +
Preference number: 5 (lower is better)
Translates to: VADPCHVFLSVGSAQEEQFISSS*AKITTA
Trigger: GGCCGTCGTGATTTTTGCCAACGATGAGGATATAAA...TTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAAATCGTCAACTTGCAGTaGAAGTTTTCCTCCCAGTAT +
Preference number: 5 (lower is better)
Translates to: GVADPCHVFLSVGSAQEEIVNLQ*KFSSQY
Trigger: ATACTGGGAGGAAAACTTCAACTGCAAGTTGACGAT...TTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTCCACTAATCGTCAACTaGCAGTTGAAGTTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SVAVALLTENGVADPCHVPLIVN*QLKFSS
Trigger: GGAGGAAAACTTCAACTGCAAGTTGACGATTAGTGG...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp CCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAACCACTAATCGTCAACTaGCAGTTGAAGTTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: PCHVFLSVGSAQEEQALEPLIVN*QLKFSS
Trigger: GGAGGAAAACTTCAACTGCAAGTTGACGATTAGTGG...TTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTACTTCAGCAACTTCTaGCCTCCAGCTTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: CFPKCWVSSRRTSFGNVIYFSNF*PPACSI
Trigger: GATGGAGCAAGCTGGAGGCAAGAAGTTGCTGAAGTA...GATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp CAGTGCAGATGGTCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATGTGCCAGCACTACCATaGAAATTAACATTGCGTATA +
Preference number: 5 (lower is better)
Translates to: QCRWSVAVALLTENGVADVPALP*KLTLRI
Trigger: TATACGCAATGTTAATTTCAATGGTAGTGCTGGCAC...ATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGACCATCTGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp CATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTAGGTGCATCCCCGTTCTaGTTAAACATCACTGGAGTG +
Preference number: 5 (lower is better)
Translates to: HVFLSVGSAQEEQALEMLGASPF*LNITGV
Trigger: CACTCCAGTGATGTTTAACAAGAACGGGGATGCACC...TAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAATGCGATAAATCCGATTaGTTTTCGTCAAGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: NGVADPCHVFLSVGSAQECDKSD*FSSRGL
Trigger: CAGCCCTCTTGACGAAAACAAATCGGATTTATCGCA...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTCTTGCTCAGGGTTCATaGTCTTGTGTTCATCATAGT +
Preference number: 5 (lower is better)
Translates to: ADPCHVFLSVGSAQEEQALAQGS*SCVHHS
Trigger: ACTATGATGAACACAAGACAATGAACCCTGAGCAAG...AGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGTGAATCCAATGGGCTaGGCTTCGTTAAAATTCTCG +
Preference number: 5 (lower is better)
Translates to: ENGVADPCHVFLSVGSAQVNPMG*ASLKFS
Trigger: CGAGAATTTTAACGAAGCCAAGCCCATTGGATTCAC...TTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCGTGAATCCAATGGGCTaGGCTTCGTTAAAATTCTCG +
Preference number: 5 (lower is better)
Translates to: VAVALLTENGVADPCHVFVNPMG*ASLKFS
Trigger: CGAGAATTTTAACGAAGCCAAGCCCATTGGATTCAC...GAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCTGTAAGCGTGGTAGTTaGTATGTAGAGCTTTTCCGC +
Preference number: 5 (lower is better)
Translates to: VAVALLTENGVADPCHVFCKRGS*YVELFR
Trigger: GCGGAAAAGCTCTACATACAAACTACCACGCTTACA...GAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTATCTCAATCCTCTTaGTGCAAGCTGAGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: SVAVALLTENGVADPCHVLSQSS*CKLRSS
Trigger: TGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAA...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAATTATCTCAATCCTCTTaGTGCAAGCTGAGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: NGVADPCHVFLSVGSAQELSQSS*CKLRSS
Trigger: TGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAA...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCACTGGTGGTATACAGTaGTTTGGGTCTACGTTTTCA +
Preference number: 5 (lower is better)
Translates to: VISILFVQAEVLRGYFDSTGGIQ*FGSTFS
Trigger: TGAAAACGTAGACCCAAACAACTGTATACCACCAGT...GGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467425.5
CDS-3UTR CAA 90 bp GGCAGCTTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAACATCTCAGATGGTCTTTCCAAATaGCTGCTTCTGTGTAATACC +
Preference number: 5 (lower is better)
Translates to: GSFFHFWTVPGVKHDNISDGLSK*LLLCNT
Trigger: GGTATTACACAGAAGCAGCAATTTGGAAAGACCATC...TGAGATGTTATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS-3UTR CAA 90 bp TCTGATGAGGCAGCTTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATATCTAGTTCTACCTTTTaGAGAAGACTACCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: SDEAASSIFGQFQGSNMISSSTF*RRLPWL
Trigger: CAGCCAAGGTAGTCTTCTCAAAAAGGTAGAACTAGA...TATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGCTGCCTCATCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS GCA 90 bp GCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAATCCTCTTTGTaGAAGCTGAGGTCCTCAGAGGTTATGTTTGGGTCTACGTTTTCA +
Preference number: 5 (lower is better)
Translates to: AQEEQALEMLSQSSL*KLRSSEVMFGSTFS
Trigger: TGAAAACGTAGACCCAAACATAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389335.7
CDS GCA 90 bp CGATACAGTTCATTAAGTATGGAAGTTTCCCTGACAAAAAGTTGTTaGCTTAGCAGGAAGGGTGCAAGAAAAGAACAACCTGATAGGTGC +
Preference number: 5 (lower is better)
Translates to: RYSSLSMEVSLTKSC*LSRKGARKEQPDRC
Trigger: GCACCTATCAGGTTGTTCTTTTCTTGCACCCTTCCTGCTAAGGCAACAACTTTTTGTCAGGGAAACTTCCATACTTAATGAACTGTATCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS-3UTR CAA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTTTTATATCCTCATCGTaGGCAAAAATCACGACGGCC +
Preference number: 5 (lower is better)
Translates to: VALLTENGVADPCHVFLSFISSS*AKITTA
Trigger: GGCCGTCGTGATTTTTGCCAACGATGAGGATATAAA...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TTCAAAACCTTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAATTTATATCCTCATCGTaGGCAAAAATCACGACGGCC +
Preference number: 5 (lower is better)
Translates to: FKTLQPRSTYVIRQVSPKFISSS*AKITTA
Trigger: GGCCGTCGTGATTTTTGCCAACGATGAGGATATAAA...TTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAAGGTTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp TTTCCTAAAGTCCTTATCACACTGATCAGTCAAAGGGGGCATGAACAAAACCTCATCGTCAACTTGCAGTaGAAGTTTTCCTCCCAGTAT +
Preference number: 5 (lower is better)
Translates to: FPKVLITLISQRGHEQNLIVNLQ*KFSSQY
Trigger: ATACTGGGAGGAAAACTTCAACTGCAAGTTGACGAT...GAGGTTTTGTTCATGCCCCCTTTGACTGATCAGTGTGATAAGGACTTTAGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp ACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTATCGTCAACTTGCAGTaGAAGTTTTCCTCCCAGTAT +
Preference number: 5 (lower is better)
Translates to: TENGVADPCHVFLSVGSAIVNLQ*KFSSQY
Trigger: ATACTGGGAGGAAAACTTCAACTGCAAGTTGACGAT...AGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp ACCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTTACTTCAGCAACTTCTaGCCTCCAGCTTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: TFLLCNLSYTKDRWGILSYFSNF*PPACSI
Trigger: GATGGAGCAAGCTGGAGGCAAGAAGTTGCTGAAGTA...AGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp GGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAAGTGCCAGCACTACCATaGAAATTAACATTGCGTATA +
Preference number: 5 (lower is better)
Translates to: GVADPCHVFLSVGSAQEEVPALP*KLTLRI
Trigger: TATACGCAATGTTAATTTCAATGGTAGTGCTGGCAC...TTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp AATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTGCGATAAATCCGATTaGTTTTCGTCAAGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: NVISILFVQAEVLRGYFDCDKSD*FSSRGL
Trigger: CAGCCCTCTTGACGAAAACAAATCGGATTTATCGCA...ATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTCACAGAAAATGGAGTaGCTGATCCATGTCATGTTT +
Preference number: 5 (lower is better)
Translates to: VISILFVQAEVLRGYFDSSQKME*LIHVMF
Trigger: AAACATGACATGGATCAGCAACTCCATTTTCTGTGA...GGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GGCAGCTTCTTCCATTTTTGGACAGTTCCAGGGGTCAAACATGATAACATCTCACTTCTGTGTAATACCTaGTATTCCATAACACTTCGG +
Preference number: 5 (lower is better)
Translates to: GSFFHFWTVPGVKHDNISLLCNT*YSITLR
Trigger: CCGAAGTGTTATGGAATACAAGGTATTACACAGAAG...TGAGATGTTATCATGTTTGACCCCTGGAACTGTCCAAAAATGGAAGAAGCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS-3UTR CAA 90 bp AAAACAAGGCATTCGAAAACAAACAGTGAACCGAGGTACGACATCAGATGGCAAGTGTCCAGGAGCTGTTaGATAATTCTATCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: KTRHSKTNSEPRYDIRWQVSRSC*IILSKS
Trigger: TGACTTTGATAGAATTATCAAACAGCTCCTGGACAC...TTGCCATCTGATGTCGTACCTCGGTTCACTGTTTGTTTTCGAATGCCTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp TCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTTTTATATCCTCATCGTaGGCAAAAATCACGACGGCC +
Preference number: 5 (lower is better)
Translates to: SCFPKCWVSSRRTSFGNVFISSS*AKITTA
Trigger: GGCCGTCGTGATTTTTGCCAACGATGAGGATATAAA...AACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TCAGTAGCAGTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTCATACATTTCTTCTGTaGTTTTCAAGTGTACGGGAC +
Preference number: 5 (lower is better)
Translates to: SVAVALLTENGVADPCHVHTFLL*FSSVRD
Trigger: GTCCCGTACACTTGAAAACAACAGAAGAAATGTATG...AACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAACTGCTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTCATACATTTCTTCTGTaGTTTTCAAGTGTACGGGAC +
Preference number: 5 (lower is better)
Translates to: GNVISILFVQAEVLRGYFHTFLL*FSSVRD
Trigger: GTCCCGTACACTTGAAAACAACAGAAGAAATGTATG...AAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp ACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCATACATTTCTTCTGTaGTTTTCAAGTGTACGGGAC +
Preference number: 5 (lower is better)
Translates to: TENGVADPCHVFLSVGSAHTFLL*FSSVRD
Trigger: GTCCCGTACACTTGAAAACAACAGAAGAAATGTATG...AGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTCCACTAATCGTCAACTaGCAGTTGAAGTTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SCFPKCWVSSRRTSFGNVPLIVN*QLKFSS
Trigger: GGAGGAAAACTTCAACTGCAAGTTGACGATTAGTGG...AACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGACAAGGAGCAAATGATTaGGAGATCTGTAATGTCACA +
Preference number: 5 (lower is better)
Translates to: SMSCFPKCWVSSRRTSFGQGAND*EICNVT
Trigger: TGTGACATTACAGATCTCCAAATCATTTGCTCCTTG...TCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGCAAGGAGCAAATGATTaGGAGATCTGTAATGTCACA +
Preference number: 5 (lower is better)
Translates to: DPCHVFLSVGSAQEEQALQGAND*EICNVT
Trigger: TGTGACATTACAGATCTCCAAATCATTTGCTCCTTG...CAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACTTTGATTCCTCAAGGAGCAAATGATTaGGAGATCTGTAATGTCACA +
Preference number: 5 (lower is better)
Translates to: LSQSSLCKLRSSEVTLIPQGAND*EICNVT
Trigger: TGTGACATTACAGATCTCCAAATCATTTGCTCCTTG...AGGAATCAAAGTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAGTGAATCCAATGGGCTaGGCTTCGTTAAAATTCTCG +
Preference number: 5 (lower is better)
Translates to: FPKCWVSSRRTSFGNVISVNPMG*ASLKFS
Trigger: CGAGAATTTTAACGAAGCCAAGCCCATTGGATTCAC...TGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATTGTAAGCGTGGTAGTTaGTATGTAGAGCTTTTCCGC +
Preference number: 5 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNCKRGS*YVELFR
Trigger: GCGGAAAAGCTCTACATACAAACTACCACGCTTACA...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp ACCTTCCTTTTATGTAACCTATCATATACCAAAGATAGGTGGGGCATACTTTCTGAGTCCTATGCCAGGTaGGGTGACAAAATAACTGAG +
Preference number: 5 (lower is better)
Translates to: TFLLCNLSYTKDRWGILSESYAR*GDKITE
Trigger: CTCAGTTATTTTGTCACCCAACCTGGCATAGGACTC...AGAAAGTATGCCCCACCTATCTTTGGTATATGATAGGTTACATAAAAGGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357716.9
ENST00000486284.5
CDS-3UTR CAA 90 bp CATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTACCTCAGAGGTTATGTTaGGGTCTACGTTTTCACAGA +
Preference number: 5 (lower is better)
Translates to: HVFLSVGSAQEEQALEMLPQRLC*GLRFHR
Trigger: TCTGTGAAAACGTAGACCCAAACATAACCTCTGAGG...TAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389335.7
CDS-3UTR CAA 90 bp AATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAATCACAGAAAATGGAGTaGCTGATCCATGTCATGTTT +
Preference number: 5 (lower is better)
Translates to: NGVADPCHVFLSVGSAQESQKME*LIHVMF
Trigger: AAACATGACATGGATCAGCAACTCCATTTTCTGTGA...TTCTTGAGCTGACCCAACACTTAGGAAAACATGACATGGATCAGCAACTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TTCAAAACCTTGCAACCTAGAAGTACATACGTAATAAGACAGGTCAGCCCCAAAGTGGTATACAGTTGTTaGGGTCTACGTTTTCACAGA +
Preference number: 5 (lower is better)
Translates to: FKTLQPRSTYVIRQVSPKVVYSC*GLRFHR
Trigger: TCTGTGAAAACGTAGACCCAAACAACTGTATACCAC...TTTGGGGCTGACCTGTCTTATTACGTATGTACTTCTAGGTTGCAAGGTTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486284.5
CDS-3UTR CAA 90 bp TTTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTGAGGTCCTCAGAGGTTACCCAAGTAACAGACTTTaGTACACTCTTTCTTACTGG +
Preference number: 5 (lower is better)
Translates to: FGNVISILFVQAEVLRGYPSNRL*YTLSYW
Trigger: CCAGTAAGAAAGAGTGTACAAAAGTCTGTTACTTGG...GTAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467425.5
CDS-3UTR CAA 90 bp ATGTCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATATCGTCAACTTGCAGTaGAAGTTTTCCTCCCAGTAT +
Preference number: 5 (lower is better)
Translates to: MSCFPKCWVSSRRTSFGNIVNLQ*KFSSQY
Trigger: ATACTGGGAGGAAAACTTCAACTGCAAGTTGACGAT...ATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCCTTGCTCAGGGTTCATaGTCTTGTGTTCATCATAGT +
Preference number: 5 (lower is better)
Translates to: CFPKCWVSSRRTSFGNVILAQGS*SCVHHS
Trigger: ACTATGATGAACACAAGACAATGAACCCTGAGCAAG...GATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp GTTGCACTTCTCACAGAAAATGGAGTTGCTGATCCATGTCATGTTTTCCTAAGTTCACAGAAAATGGAGTaGCTGATCCATGTCATGTTT +
Preference number: 5 (lower is better)
Translates to: VALLTENGVADPCHVFLSSQKME*LIHVMF
Trigger: AAACATGACATGGATCAGCAACTCCATTTTCTGTGA...ACTTAGGAAAACATGACATGGATCAGCAACTCCATTTTCTGTGAGAAGTGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAGTGGTATACAGTTGTTaGGGTCTACGTTTTCACAGA +
Preference number: 5 (lower is better)
Translates to: FPKCWVSSRRTSFGNVISVVYSC*GLRFHR
Trigger: TCTGTGAAAACGTAGACCCAAACAACTGTATACCAC...TGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467425.5
CDS-3UTR CAA 90 bp TCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTGTGTCCAGGAGCTGTTaGATAATTCTATCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: SCFPKCWVSSRRTSFGNVVSRSC*IILSKS
Trigger: TGACTTTGATAGAATTATCAAACAGCTCCTGGACAC...AACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS-3UTR CAA 90 bp TCATGTTTTCCTAAGTGTTGGGTCAGCTCAAGAAGAACAAGCTTTGGAAATGTTGTGCCAGCACTACCATaGAAATTAACATTGCGTATA +
Preference number: 5 (lower is better)
Translates to: SCFPKCWVSSRRTSFGNVVPALP*KLTLRI
Trigger: TATACGCAATGTTAATTTCAATGGTAGTGCTGGCAC...AACATTTCCAAAGCTTGTTCTTCTTGAGCTGACCCAACACTTAGGAAAACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389335.7
ENST00000440923.7
ENST00000467425.5
CDS CCA 72 bp CCCTCGATCCGGATTGAGTGCGGGGCGTACATCTCCTaGCCGCGCGCCGCCGCCGCCAGCGCGCACAGGAGC +
Preference number: 6 (lower is better)
Translates to: PSIRIECGAYIS*PRAAAASAHRS
Trigger: GCTCCTGTGCGCGCTGGCGGCGGCGGCGCGCGGCCAGGAGATGTACGCCCCGCACTCAATCCGGATCGAGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000440923.7
ENST00000467425.5
ENST00000486284.5
CDS GCA 72 bp GGGCAGAGGCTGCTGGAGCAGGAGGCGAGAGAACACTaGGGCAGAACCCACCGCTCAGCGGCCCCGGATCCG +
Preference number: 6 (lower is better)
Translates to: GQRLLEQEAREH*GRTHRSAAPDP
Trigger: CGGATCCGGGGCCGCTGAGCGGTGGGTTCTGCCGCAGTGTTCTCTCGCCTCCTGCTCCAGCAGCCTCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS GCA 72 bp TTCACGCACCCCTCTGCCTCCCAACGGGCGCCTTCATaGCTCGCTCCGGGAATCGTCCTCCAAGCCGAGGAT +
Preference number: 6 (lower is better)
Translates to: FTHPSASQRAPS*LAPGIVLQAED
Trigger: ATCCTCGGCTTGGAGGACGATTCCCGGAGCGAGGCATGAAGGCGCCCGTTGGGAGGCAGAGGGGTGCGTGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435689.5
CDS CCA 72 bp TTCATCAAAGTCAGGACGCGGAGCAGCTTCCTCAGCTaGACCATGCTGCTCCGGCTGCTGCGGTGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: FIKVRTRSSFLS*TMLLRLLRWRR
Trigger: CCGCCGCCACCGCAGCAGCCGGAGCAGCATGGTCCAGCTGAGGAAGCTGCTCCGCGTCCTGACTTTGATGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000440923.7
ENST00000467425.5
ENST00000486284.5
CDS CAA 90 bp ACTCCAACTACTTTCTCCGGCTTGACGAAAACCGGCGGTTCGCCGTaGGTGCAGCGCACGTCGGAGGTGTCCTTCTGGATGAGCGCCTGG +
Preference number: 6 (lower is better)
Translates to: TPTTFSGLTKTGGSP*VQRTSEVSFWMSAW
Trigger: CCAGGCGCTCATCCAGAAGGACACCTCCGACGTGCGCTGCACCAACGGCGAACCGCCGGTTTTCGTCAAGCCGGAGAAAGTAGTTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000440923.7
ENST00000467425.5
ENST00000486284.5
CDS CAA 72 bp ACTTTCTCCGGCTTGACGAAAACCGGCGGTTCGCCGTaGGTGCAGCGCACGTCGGAGGTGTCCTTCTGGATG +
Preference number: 6 (lower is better)
Translates to: TFSGLTKTGGSP*VQRTSEVSFWM
Trigger: CATCCAGAAGGACACCTCCGACGTGCGCTGCACCAACGGCGAACCGCCGGTTTTCGTCAAGCCGGAGAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000440923.7
ENST00000467425.5
ENST00000486284.5
CDS CAA 72 bp CCCGAAGCCCCAATCACTCCAACTACTTTCTCCGGCTaGACGAAAACCGGCGGTTCGCCGTTGGTGCAGCGC +
Preference number: 6 (lower is better)
Translates to: PEAPITPTTFSG*TKTGGSPLVQR
Trigger: GCGCTGCACCAACGGCGAACCGCCGGTTTTCGTCAAGCCGGAGAAAGTAGTTGGAGTGATTGGGGCTTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000440923.7
ENST00000467425.5
ENST00000486284.5
CDS TCA 72 bp CCAGCGTCACGTTGGGCAGTAGGTTGGGATCACTGTTaGTCTGGTCCAGGGCGTAGAGCATCGCTTCCAGCC +
Preference number: 6 (lower is better)
Translates to: PASRWAVGWDHC*SGPGRRASLPA
Trigger: GGCTGGAAGCGATGCTCTACGCCCTGGACCAGATCAACAGTGATCCCAACCTACTGCCCAACGTGACGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000440923.7
ENST00000467425.5
ENST00000486284.5
CDS TCA 72 bp CCGAAGCCCCAATCACTCCAACTACTTTCTCCGGCTTaGCGAAAACCGGCGGTTCGCCGTTGGTGCAGCGCA +
Preference number: 6 (lower is better)
Translates to: PKPQSLQLLSPA*RKPAVRRWCSA
Trigger: TGCGCTGCACCAACGGCGAACCGCCGGTTTTCGTCAAGCCGGAGAAAGTAGTTGGAGTGATTGGGGCTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000440923.7
ENST00000467425.5
ENST00000486284.5
CDS CAA 90 bp TCACAGAGCTCGGTCTTTGCCTCACCGTTGGGTCTGTCACTGGGTTaGTGTGACAGCCTCGATGACATGGTGGCTGCTGTGACTACCGCC +
Preference number: 6 (lower is better)
Translates to: SQSSVFASPLGLSLG*CDSLDDMVAAVTTA
Trigger: GGCGGTAGTCACAGCAGCCACCATGTCATCGAGGCTGTCACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CAA 90 bp CGTCTGTCCACTGCCCGATCAGACGGTAACCCGGGTTGCTGGTGTTaGTGGTCTGGTACTGAAAGATGTCATAACGCCCAGGTGCATCCC +
Preference number: 6 (lower is better)
Translates to: RLSTARSDGNPGCWC*WSGTERCHNAQVHP
Trigger: GGGATGCACCTGGGCGTTATGACATCTTTCAGTACCAGACCACAAACACCAGCAACCCGGGTTACCGTCTGATCGGGCAGTGGACAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000445087.1
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CCA 72 bp AGAGCTCGGTCTTTGCCTCACCGTTGGGTCTGTCACTaGGTTTGTGTGACAGCCTCGATGACATGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: RARSLPHRWVCH*VCVTASMTWWL
Trigger: CAGCCACCATGTCATCGAGGCTGTCACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CAA 72 bp TCGGTCTTTGCCTCACCGTTGGGTCTGTCACTGGGTTaGTGTGACAGCCTCGATGACATGGTGGCTGCTGTG +
Preference number: 6 (lower is better)
Translates to: SVFASPLGLSLG*CDSLDDMVAAV
Trigger: CACAGCAGCCACCATGTCATCGAGGCTGTCACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CAA 90 bp TTGCAGCAGGGCTGTTTGGGTCTACGTTTTCACAGAGCTCGGTCTTaGCCTCACCGTTGGGTCTGTCACTGGGTTTGTGTGACAGCCTCG +
Preference number: 6 (lower is better)
Translates to: LQQGCLGLRFHRARS*PHRWVCHWVCVTAS
Trigger: CGAGGCTGTCACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGAAAACGTAGACCCAAACAGCCCTGCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357716.9
CDS CCA 72 bp CTTCAGCAACTTCTTGCCTCCAGCTTGCTCCATCTCTaGGCAGACACCCCGGTAGTCAGCACAGAGATCCTT +
Preference number: 6 (lower is better)
Translates to: LQQLLASSLLHL*ADTPVVSTEIL
Trigger: AAGGATCTCTGTGCTGACTACCGGGGTGTCTGCCCAGAGATGGAGCAAGCTGGAGGCAAGAAGTTGCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000445087.1
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CCA 72 bp GCCCGATCAGACGGTAACCCGGGTTGCTGGTGTTTGTaGTCTGGTACTGAAAGATGTCATAACGCCCAGGTG +
Preference number: 6 (lower is better)
Translates to: ARSDGNPGCWCL*SGTERCHNAQV
Trigger: CACCTGGGCGTTATGACATCTTTCAGTACCAGACCACAAACACCAGCAACCCGGGTTACCGTCTGATCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000445087.1
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS GCA 72 bp CGTCTGTCCACTGCCCGATCAGACGGTAACCCGGGTTaGTGGTGTTTGTGGTCTGGTACTGAAAGATGTCAT +
Preference number: 6 (lower is better)
Translates to: RLSTARSDGNPG*WCLWSGTERCH
Trigger: ATGACATCTTTCAGTACCAGACCACAAACACCAGCAACCCGGGTTACCGTCTGATCGGGCAGTGGACAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000445087.1
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CCA 72 bp CTACGTTTTCACAGAGCTCGGTCTTTGCCTCACCGTTaGGTCTGTCACTGGGTTTGTGTGACAGCCTCGATG +
Preference number: 6 (lower is better)
Translates to: LRFHRARSLPHR*VCHWVCVTASM
Trigger: CATCGAGGCTGTCACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGAAAACGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CAA 72 bp ACTGCCCGATCAGACGGTAACCCGGGTTGCTGGTGTTaGTGGTCTGGTACTGAAAGATGTCATAACGCCCAG +
Preference number: 6 (lower is better)
Translates to: TARSDGNPGCWC*WSGTERCHNAQ
Trigger: CTGGGCGTTATGACATCTTTCAGTACCAGACCACAAACACCAGCAACCCGGGTTACCGTCTGATCGGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000445087.1
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CAA 72 bp GGCTGTTTGGGTCTACGTTTTCACAGAGCTCGGTCTTaGCCTCACCGTTGGGTCTGTCACTGGGTTTGTGTG +
Preference number: 6 (lower is better)
Translates to: GCLGLRFHRARS*PHRWVCHWVCV
Trigger: CACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGAAAACGTAGACCCAAACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357716.9
CDS CAA 90 bp CTGTTTGGGTCTACGTTTTCACAGAGCTCGGTCTTTGCCTCACCGTaGGGTCTGTCACTGGGTTTGTGTGACAGCCTCGATGACATGGTG +
Preference number: 6 (lower is better)
Translates to: LFGSTFSQSSVFASP*GLSLGLCDSLDDMV
Trigger: CACCATGTCATCGAGGCTGTCACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGAAAACGTAGACCCAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357716.9
ENST00000389336.8
ENST00000463676.6
CDS CAA 90 bp TGCACTTCTCACTGTTTGGGTCTACGTTTTCACAGAGCTCGGTCTTaGCCTCACCGTTGGGTCTGTCACTGGGTTTGTGTGACAGCCTCG +
Preference number: 6 (lower is better)
Translates to: CTSHCLGLRFHRARS*PHRWVCHWVCVTAS
Trigger: CGAGGCTGTCACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGAAAACGTAGACCCAAACAGTGAGAAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389336.8
CDS CAA 90 bp CCTCAGAGGTTATGTTTGGGTCTACGTTTTCACAGAGCTCGGTCTTaGCCTCACCGTTGGGTCTGTCACTGGGTTTGTGTGACAGCCTCG +
Preference number: 6 (lower is better)
Translates to: PQRLCLGLRFHRARS*PHRWVCHWVCVTAS
Trigger: CGAGGCTGTCACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGAAAACGTAGACCCAAACATAACCTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389335.7
CDS TCA 72 bp TGTAGCAAAGAAAGATGCCCGTCAAAAGAACATAGCTaGGTTCCCGCCCAGATGCCCGGACAATGGGCGTGT +
Preference number: 6 (lower is better)
Translates to: CSKERCPSKEHS*VPAQMPGQWAC
Trigger: ACACGCCCATTGTCCGGGCATCTGGGCGGGAACTCAGCTATGTTCTTTTGACGGGCATCTTTCTTTGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS TCA 72 bp AGATGGCCGAATACGGGTGATTTCTGCATTTCCATCTaGGGTACCGGGTTCATCTCACTAGGGAGCGCCAGA +
Preference number: 6 (lower is better)
Translates to: RWPNTGDFCISI*GTGFISLGSAR
Trigger: TCTGGCGCTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTATTCGGCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS GCA 72 bp GTCTCAACCCAAAGCCTCTTCCTACATCACACTGAATaGCACAGCAAGTCACCATCCACTTGCCCTCCTCTC +
Preference number: 6 (lower is better)
Translates to: VSTQSLFLHHTE*HSKSPSTCPPL
Trigger: GAGAGGAGGGCAAGTGGATGGTGACTTGCTGTGGCATTCAGTGTGATGTAGGAAGAGGCTTTGGGTTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS CCA 72 bp CTGTCCACTGCCCGATCAGACGGTAACCCGGGTTGCTaGTGTTTGTGGTCTGGTACTGAAAGATGTCATAAC +
Preference number: 6 (lower is better)
Translates to: LSTARSDGNPGC*CLWSGTERCHN
Trigger: GTTATGACATCTTTCAGTACCAGACCACAAACACCAGCAACCCGGGTTACCGTCTGATCGGGCAGTGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000445087.1
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CAA 72 bp AGCCTCGATGACATGGTGGCTGCTGTGACTACCGCCTaGAAGCTTCGCTTCCGTTTCTGGACATTGAGTTCA +
Preference number: 6 (lower is better)
Translates to: SLDDMVAAVTTA*KLRFRFWTLSS
Trigger: TGAACTCAATGTCCAGAAACGGAAGCGAAGCTTCAAGGCGGTAGTCACAGCAGCCACCATGTCATCGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CAA 72 bp TCTACGTTTTCACAGAGCTCGGTCTTTGCCTCACCGTaGGGTCTGTCACTGGGTTTGTGTGACAGCCTCGAT +
Preference number: 6 (lower is better)
Translates to: STFSQSSVFASP*GLSLGLCDSLD
Trigger: ATCGAGGCTGTCACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGAAAACGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CAA 72 bp CACTGTTTGGGTCTACGTTTTCACAGAGCTCGGTCTTaGCCTCACCGTTGGGTCTGTCACTGGGTTTGTGTG +
Preference number: 6 (lower is better)
Translates to: HCLGLRFHRARS*PHRWVCHWVCV
Trigger: CACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGAAAACGTAGACCCAAACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389336.8
CDS CAA 72 bp GATGGGAAGCCAAGCAGCTGTCTTGGGCCACATATCTaGTTGATGCCCTCAGTGCAAGGCCCCTTGGTAATT +
Preference number: 6 (lower is better)
Translates to: DGKPSSCLGPHI*LMPSVQGPLVI
Trigger: AATTACCAAGGGGCCTTGCACTGAGGGCATCAACAAGATATGTGGCCCAAGACAGCTGCTTGGCTTCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458641.2
CDS CAA 72 bp CCACAGCAAGTCACCATCCACTTGCCCTCCTCTCAATaGGCCACTTGCTCTGGAGACACAACAGAGCCTATA +
Preference number: 6 (lower is better)
Translates to: PQQVTIHLPSSQ*ATCSGDTTEPI
Trigger: TATAGGCTCTGTTGTGTCTCCAGAGCAAGTGGCCAATTGAGAGGAGGGCAAGTGGATGGTGACTTGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS CAA 90 bp ATGTTTGGGTCTACGTTTTCACAGAGCTCGGTCTTTGCCTCACCGTaGGGTCTGTCACTGGGTTTGTGTGACAGCCTCGATGACATGGTG +
Preference number: 6 (lower is better)
Translates to: MFGSTFSQSSVFASP*GLSLGLCDSLDDMV
Trigger: CACCATGTCATCGAGGCTGTCACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGAAAACGTAGACCCAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389335.7
CDS CAA 90 bp TTGTTTGGGTCTACGTTTTCACAGAGCTCGGTCTTTGCCTCACCGTaGGGTCTGTCACTGGGTTTGTGTGACAGCCTCGATGACATGGTG +
Preference number: 6 (lower is better)
Translates to: LFGSTFSQSSVFASP*GLSLGLCDSLDDMV
Trigger: CACCATGTCATCGAGGCTGTCACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGAAAACGTAGACCCAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402647.6
ENST00000440923.7
ENST00000467425.5
ENST00000486284.5
CDS CAA 90 bp GTGGTATACAGTTGTTTGGGTCTACGTTTTCACAGAGCTCGGTCTTaGCCTCACCGTTGGGTCTGTCACTGGGTTTGTGTGACAGCCTCG +
Preference number: 6 (lower is better)
Translates to: VVYSCLGLRFHRARS*PHRWVCHWVCVTAS
Trigger: CGAGGCTGTCACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGAAAACGTAGACCCAAACAACTGTATACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402647.6
ENST00000467425.5
ENST00000486284.5
CDS CAA 90 bp AGAGTTACTTACTGTTTGGGTCTACGTTTTCACAGAGCTCGGTCTTaGCCTCACCGTTGGGTCTGTCACTGGGTTTGTGTGACAGCCTCG +
Preference number: 6 (lower is better)
Translates to: RVTYCLGLRFHRARS*PHRWVCHWVCVTAS
Trigger: CGAGGCTGTCACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGAAAACGTAGACCCAAACAGTAAGTAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS TCA 72 bp GTATGTCTCAACCCAAAGCCTCTTCCTACATCACACTaGATGCCACAGCAAGTCACCATCCACTTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: VCLNPKPLPTSH*MPQQVTIHLPS
Trigger: GGAGGGCAAGTGGATGGTGACTTGCTGTGGCATTCAGTGTGATGTAGGAAGAGGCTTTGGGTTGAGACATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS GCA 72 bp GTGTCTTCTTTCTCTGTCCTGGCTTACATGGTAGTGTaGACACTGAGGCGGGTATCTCTCGGACTCCTTTAC +
Preference number: 6 (lower is better)
Translates to: VSSFSVLAYMVV*TLRRVSLGLLY
Trigger: GTAAAGGAGTCCGAGAGATACCCGCCTCAGTGTGCACACTACCATGTAAGCCAGGACAGAGAAAGAAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CAA 72 bp AGTTGTTTGGGTCTACGTTTTCACAGAGCTCGGTCTTaGCCTCACCGTTGGGTCTGTCACTGGGTTTGTGTG +
Preference number: 6 (lower is better)
Translates to: SCLGLRFHRARS*PHRWVCHWVCV
Trigger: CACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGAAAACGTAGACCCAAACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402647.6
ENST00000467425.5
ENST00000486284.5
CDS CAA 72 bp GGGAAGCCAAGCAGCTGTCTTGGGCCACATATCTTGTaGATGCCCTCAGTGCAAGGCCCCTTGGTAATTAAT +
Preference number: 6 (lower is better)
Translates to: GKPSSCLGPHIL*MPSVQGPLVIN
Trigger: ATTAATTACCAAGGGGCCTTGCACTGAGGGCATCAACAAGATATGTGGCCCAAGACAGCTGCTTGGCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458641.2
CDS CAA 72 bp TACTGTTTGGGTCTACGTTTTCACAGAGCTCGGTCTTaGCCTCACCGTTGGGTCTGTCACTGGGTTTGTGTG +
Preference number: 6 (lower is better)
Translates to: YCLGLRFHRARS*PHRWVCHWVCV
Trigger: CACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGAAAACGTAGACCCAAACAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS CAA 90 bp GCCACAGCAAGTCACCATCCACTTGCCCTCCTCTCAATTGGCCACTaGCTCTGGAGACACAACAGAGCCTATATCATTCATTCTGTTCCT +
Preference number: 6 (lower is better)
Translates to: ATASHHPLALLSIGH*LWRHNRAYIIHSVP
Trigger: AGGAACAGAATGAATGATATAGGCTCTGTTGTGTCTCCAGAGCAAGTGGCCAATTGAGAGGAGGGCAAGTGGATGGTGACTTGCTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS GCA 72 bp TGTGGTCTGGTACTGAAAGATGTCATAACGCCCAGGTaGATCCCCGTTCTTGTTAAACATCACTGGAGTGCC +
Preference number: 6 (lower is better)
Translates to: CGLVLKDVITPR*IPVLVKHHWSA
Trigger: GGCACTCCAGTGATGTTTAACAAGAACGGGGATGCACCTGGGCGTTATGACATCTTTCAGTACCAGACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000445087.1
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CAA 72 bp TTATGTTTGGGTCTACGTTTTCACAGAGCTCGGTCTTaGCCTCACCGTTGGGTCTGTCACTGGGTTTGTGTG +
Preference number: 6 (lower is better)
Translates to: LCLGLRFHRARS*PHRWVCHWVCV
Trigger: CACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGAAAACGTAGACCCAAACATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389335.7
CDS CAA 72 bp AATTGTTTGGGTCTACGTTTTCACAGAGCTCGGTCTTaGCCTCACCGTTGGGTCTGTCACTGGGTTTGTGTG +
Preference number: 6 (lower is better)
Translates to: NCLGLRFHRARS*PHRWVCHWVCV
Trigger: CACACAAACCCAGTGACAGACCCAACGGTGAGGCAAAGACCGAGCTCTGTGAAAACGTAGACCCAAACAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440923.7
CDS CAA 90 bp GAAATTAACATTGCGTATATACTTCAGCAACTTCTTGCCTCCAGCTaGCTCCATCTCTGGGCAGACACCCCGGTAGTCAGCACAGAGATC +
Preference number: 6 (lower is better)
Translates to: EINIAYILQQLLASS*LHLWADTPVVSTEI
Trigger: GATCTCTGTGCTGACTACCGGGGTGTCTGCCCAGAGATGGAGCAAGCTGGAGGCAAGAAGTTGCTGAAGTATATACGCAATGTTAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000445087.1
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS GCA 72 bp ACTGAGGCGGGTATCTCTCGGACTCCTTTACCCCACTaGATGTCTTCTATACTACTAAGGGTACTACGATGT +
Preference number: 6 (lower is better)
Translates to: TEAGISRTPLPH*MSSILLRVLRC
Trigger: ACATCGTAGTACCCTTAGTAGTATAGAAGACATGCAGTGGGGTAAAGGAGTCCGAGAGATACCCGCCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458641.2
CDS GCA 72 bp CTTTGCGTTCCTGGGGGATTCTCACGGACTGGGCAATaGAGAGTCCACCTGTTTAAGAGAAGAAAACATAGT +
Preference number: 6 (lower is better)
Translates to: LCVPGGFSRTGQ*RVHLFKRRKHS
Trigger: ACTATGTTTTCTTCTCTTAAACAGGTGGACTCTGCATTGCCCAGTCCGTGAGAATCCCCCAGGAACGCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461677.6
CDS GCA 72 bp GTCACCATCCACTTGCCCTCCTCTCAATTGGCCACTTaGTCTGGAGACACAACAGAGCCTATATCATTCATT +
Preference number: 6 (lower is better)
Translates to: VTIHLPSSQLAT*SGDTTEPISFI
Trigger: AATGAATGATATAGGCTCTGTTGTGTCTCCAGAGCAAGTGGCCAATTGAGAGGAGGGCAAGTGGATGGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS CAA 72 bp AGTCACCATCCACTTGCCCTCCTCTCAATTGGCCACTaGCTCTGGAGACACAACAGAGCCTATATCATTCAT +
Preference number: 6 (lower is better)
Translates to: SHHPLALLSIGH*LWRHNRAYIIH
Trigger: ATGAATGATATAGGCTCTGTTGTGTCTCCAGAGCAAGTGGCCAATTGAGAGGAGGGCAAGTGGATGGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS CAA 72 bp GATGGGAATCTCCAAAATCTTGCCTCAGACAATCGCTaGACTAGATGCCAGTGCAGATGGTCAGTAGCAGTT +
Preference number: 6 (lower is better)
Translates to: DGNLQNLASDNR*TRCQCRWSVAV
Trigger: AACTGCTACTGACCATCTGCACTGGCATCTAGTCAAGCGATTGTCTGAGGCAAGATTTTGGAGATTCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471242.2
CDS CAA 90 bp TTCAGTCCTCAACATGCACACATTTCTAGAGCATCTGACTTTATCTaGGATGGGAAGCCAAGCAGCTGTCTTGGGCCACATATCTTGTTG +
Preference number: 6 (lower is better)
Translates to: FSPQHAHISRASDFI*DGKPSSCLGPHILL
Trigger: CAACAAGATATGTGGCCCAAGACAGCTGCTTGGCTTCCCATCCAAGATAAAGTCAGATGCTCTAGAAATGTGTGCATGTTGAGGACTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458641.2
CDS CCA 72 bp CAAGAAAACTCGCCGGAAAGAACACACTGCCACATCTaGTTTGGCAATCATCAGGAAAGTGATGATGTAGCA +
Preference number: 6 (lower is better)
Translates to: QENSPERTHCHI*FGNHQESDDVA
Trigger: TGCTACATCATCACTTTCCTGATGATTGCCAAACCAGATGTGGCAGTGTGTTCTTTCCGGCGAGTTTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CCA 72 bp CATGTCTTCTATACTACTAAGGGTACTACGATGTCCTaGAAGGACTTTCCATGCCAACATTCTGTAGCAGGC +
Preference number: 6 (lower is better)
Translates to: HVFYTTKGTTMS*KDFPCQHSVAG
Trigger: GCCTGCTACAGAATGTTGGCATGGAAAGTCCTTCCAGGACATCGTAGTACCCTTAGTAGTATAGAAGACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458641.2
CDS CAA 72 bp ACTATACATGTCGTGTACATAGTGAATCCAATGGGCTaGGCTTCGTTAAAATTCTCGGGTACACCCCGAGTC +
Preference number: 6 (lower is better)
Translates to: TIHVVYIVNPMG*ASLKFSGTPRV
Trigger: GACTCGGGGTGTACCCGAGAATTTTAACGAAGCCAAGCCCATTGGATTCACTATGTACACGACATGTATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS TCA 72 bp ATCTGGGGGATCTTTTTGAGAAGACTACCTTGGCTGTaGTCACGTTCTCCTCATAACCTTCATGCTAATCAG +
Preference number: 6 (lower is better)
Translates to: IWGIFLRRLPWL*SRSPHNLHANQ
Trigger: CTGATTAGCATGAAGGTTATGAGGAGAACGTGATCACAGCCAAGGTAGTCTTCTCAAAAAGATCCCCCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448328.6
CDS CCA 72 bp CAGGGCCTTTGGGAAAGCAGTCAAAAGCTATACTGTTaGTGGGATAGTGTACCAAGTAACAGACTTTTGTAC +
Preference number: 6 (lower is better)
Translates to: QGLWESSQKLYC*WDSVPSNRLLY
Trigger: GTACAAAAGTCTGTTACTTGGTACACTATCCCACCAACAGTATAGCTTTTGACTGCTTTCCCAAAGGCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486284.5
CDS GCA 72 bp TATGCGATAAATCCGATTTGTTTTCGTCAAGAGGGCTaGATAACTGATGCACATACCCAAGCCCAAGAAAAC +
Preference number: 6 (lower is better)
Translates to: YAINPICFRQEG*ITDAHTQAQEN
Trigger: GTTTTCTTGGGCTTGGGTATGTGCATCAGTTATGCAGCCCTCTTGACGAAAACAAATCGGATTTATCGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CCA 72 bp GGCCTTTGGGAAAGCAGTCAAAAGCTATACTGTTGGTaGGATAGTGTACCAAGTAACAGACTTTTGTACACT +
Preference number: 6 (lower is better)
Translates to: GLWESSQKLYCW*DSVPSNRLLYT
Trigger: AGTGTACAAAAGTCTGTTACTTGGTACACTATCCCACCAACAGTATAGCTTTTGACTGCTTTCCCAAAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486284.5
CDS CAA 72 bp ATCACTGGAGTGCCAGCACTACCATTGAAATTAACATaGCGTATATACTTCAGCAACTTCTTGCCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: ITGVPALPLKLT*RIYFSNFLPPA
Trigger: AGCTGGAGGCAAGAAGTTGCTGAAGTATATACGCAATGTTAATTTCAATGGTAGTGCTGGCACTCCAGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000445087.1
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS CAA 90 bp TCAGCTCAAGAAGAACAAGCTTTGGAAATGTTATCTCAATCCTCTTaGTGCAAGCTGAGGTCCTCAGAGGTTATGTTTGGGTCTACGTTT +
Preference number: 6 (lower is better)
Translates to: SAQEEQALEMLSQSS*CKLRSSEVMFGSTF
Trigger: AAACGTAGACCCAAACATAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAAGCTTGTTCTTCTTGAGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389335.7
CDS TCA 72 bp GGATCAACACCAAACCAAATGAACACCCCTAGAAGCTaGACTGATATTAAACTGGAAGTGATTGCCAGTTGT +
Preference number: 6 (lower is better)
Translates to: GSTPNQMNTPRS*TDIKLEVIASC
Trigger: ACAACTGGCAATCACTTCCAGTTTAATATCAGTTCAGCTTCTAGGGGTGTTCATTTGGTTTGGTGTTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357716.9
ENST00000389335.7
ENST00000389336.8
ENST00000402647.6
ENST00000440923.7
ENST00000458641.2
ENST00000463676.6
ENST00000467425.5
ENST00000486284.5
CDS TCA 72 bp CTTTGGAAATGTTATCTCAATCCTCTTTGTGCAAGCTaGGGTCCTCAGAGGTTATGTTTGGGTCTACGTTTT +
Preference number: 6 (lower is better)
Translates to: LWKCYLNPLCAS*GPQRLCLGLRF
Trigger: AAAACGTAGACCCAAACATAACCTCTGAGGACCTCAGCTTGCACAAAGAGGATTGAGATAACATTTCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389335.7
CDS TCA 72 bp TCTAGTTCTACCTTTTTGAGAAGACTACCTTGGCTGTaGTCACGTTCTCCTCATAACCTTCATGCTAATCAG +
Preference number: 6 (lower is better)
Translates to: SSSTFLRRLPWL*SRSPHNLHANQ
Trigger: CTGATTAGCATGAAGGTTATGAGGAGAACGTGATCACAGCCAAGGTAGTCTTCTCAAAAAGGTAGAACTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443259.1
CDS CAA 90 bp CAAAAGCTATACTGTTGGTGGGATAGTGTACCAAGTAACAGACTTTaGTACACTCTTTCTTACTGGTGGTATACAGTTGTTTGGGTCTAC +
Preference number: 6 (lower is better)
Translates to: QKLYCWWDSVPSNRL*YTLSYWWYTVVWVY
Trigger: GTAGACCCAAACAACTGTATACCACCAGTAAGAAAGAGTGTACAAAAGTCTGTTACTTGGTACACTATCCCACCAACAGTATAGCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467425.5
ENST00000486284.5
CDS GCA 72 bp TCATTAAGTATGGAAGTTTCCCTGACAAAAAGTTGTTaGCTTAGCAGGAAGGGTGCAAGAAAAGAACAACCT +
Preference number: 6 (lower is better)
Translates to: SLSMEVSLTKSC*LSRKGARKEQP
Trigger: AGGTTGTTCTTTTCTTGCACCCTTCCTGCTAAGGCAACAACTTTTTGTCAGGGAAACTTCCATACTTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463676.6
CDS CCA 72 bp AATCTTTGGGAAAGCAGTCAAAAGCTATACTGTTGGTaGGATAGTGTACCAAGTAACAGACTTTTGTACACT +
Preference number: 6 (lower is better)
Translates to: NLWESSQKLYCW*DSVPSNRLLYT
Trigger: AGTGTACAAAAGTCTGTTACTTGGTACACTATCCCACCAACAGTATAGCTTTTGACTGCTTTCCCAAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467425.5
CDS CAA 72 bp TACTGTTGGTGGGATAGTGTACCAAGTAACAGACTTTaGTACACTCTTTCTTACTGGTGGTATACAGTTGTT +
Preference number: 6 (lower is better)
Translates to: YCWWDSVPSNRL*YTLSYWWYTVV
Trigger: AACAACTGTATACCACCAGTAAGAAAGAGTGTACAAAAGTCTGTTACTTGGTACACTATCCCACCAACAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402647.6
ENST00000467425.5
ENST00000486284.5
CDS CAA 90 bp AAGTTAGCAATTGGGAATTCTAAGCATTTAACCTTTGAGCTGGTCTaGTGTTACTTACAAAGTGATAGCTATATGCCCATTTTACCTGGG +
Preference number: 6 (lower is better)
Translates to: KLAIGNSKHLTFELV*CYLQSDSYMPILPG
Trigger: CCCAGGTAAAATGGGCATATAGCTATCACTTTGTAAGTAACACAAGACCAGCTCAAAGGTTAAATGCTTAGAATTCCCAATTGCTAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463676.6