RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRM6 (Homo sapiens)

Ensembl gene IDs: ENSG00000113262

Ensembl transcript IDs: ENST00000231188.9, ENST00000517717.3, ENST00000518082.1, ENST00000650031.1, ENST00000650488.1

Found 744 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACCCAGGGTCTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTaGGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTCTTGCTG +
Preference number: 1 (lower is better)
Translates to: HPGSLPPCQRNPTQA*VPPSRCTAPGLLLL
Trigger: CAGCAAGAGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAGACCCTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 90 bp CAGCCCCACCGACGCGGAGCATGGTCTTGGCAAACTCCCTGCCACTaGCTGTTCACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGA +
Preference number: 1 (lower is better)
Translates to: QPHRRGAWSWQTPCH*LFTVDPGSIQLPPR
Trigger: TCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGTGAACAGTCAGTGGCAGGGAGTTTGCCAAGACCATGCTCCGCGTCGGTGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 90 bp CCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTCTTGCTaGGACAGCTCCTCCTCCACTCCAACCCCATGTTTCATTCTGGGG +
Preference number: 1 (lower is better)
Translates to: PECLHPDAQPQVSSC*DSSSSTPTPCFILG
Trigger: CCCCAGAATGAAACATGGGGTTGGAGTGGAGGAGGAGCTGTCTCAGCAAGAGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR CCA 90 bp GCGGAGCATGGTCTTGGCAAACTCCCTGCCACTGACTGTTCACCGTaGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGA +
Preference number: 1 (lower is better)
Translates to: AEHGLGKLPATDCSP*TRALYSFHLEARGR
Trigger: TCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGTGAACAGTCAGTGGCAGGGAGTTTGCCAAGACCATGCTCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 90 bp TCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTaGGGAAGCATGAAGCTCACATGCTGGAATCGGGGTAGAGCTGGG +
Preference number: 1 (lower is better)
Translates to: SRWLFPTMGSESGLW*GSMKLTCWNRGRAG
Trigger: CCCAGCTCTACCCCGATTCCAGCATGTGAGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 90 bp CCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATaGGGAATGAAGGGTTTCCATACCCGTCCTGAGCCATCCACTTGG +
Preference number: 1 (lower is better)
Translates to: PQAWRSACKWTSQYL*GMKGFHTRPEPSTW
Trigger: CCAAGTGGATGGCTCAGGACGGGTATGGAAACCCTTCATTCCTCATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR GCA 90 bp ATCCACTTGGGATTCACCCTCACCACGGCCATGACTCTCTGTCACTaGTCCCAACCTGGAGCTCCTAAACCCATCCCCAACCCGAACACA +
Preference number: 1 (lower is better)
Translates to: IHLGFTLTTAMTLCH*SQPGAPKPIPNPNT
Trigger: TGTGTTCGGGTTGGGGATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGTGAGGGTGAATCCCAAGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR CCA 90 bp GCTAGAACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTaGTCTGTGGTGAGGAAGCATGAAGCTCACATGCTGGAATCGGGG +
Preference number: 1 (lower is better)
Translates to: ARTFSVAVSHHGKRV*SVVRKHEAHMLESG
Trigger: CCCCGATTCCAGCATGTGAGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGTTCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 90 bp TGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATaGAGCTCACATGCTGGAATCGGGGTAGAGCTGGGTCCAGTTCCT +
Preference number: 1 (lower is better)
Translates to: CFPPWEASLVCGEEA*SSHAGIGVELGPVP
Trigger: AGGAACTGGACCCAGCTCTACCCCGATTCCAGCATGTGAGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 90 bp GACTTCCCAGTACCTATGAGGAATGAAGGGTTTCCATACCCGTCCTaGGCCATCCACTTGGGATTCACCCTCACCACGGCCATGACTCTC +
Preference number: 1 (lower is better)
Translates to: DFPVPMRNEGFPYPS*AIHLGFTLTTAMTL
Trigger: GAGAGTCATGGCCGTGGTGAGGGTGAATCCCAAGTGGATGGCTCAGGACGGGTATGGAAACCCTTCATTCCTCATAGGTACTGGGAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 90 bp AGAGTTCCTGCCAGAGAGGCCCACAGGCATGAACATGGCAGAGTGTaGAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCA +
Preference number: 1 (lower is better)
Translates to: RVPAREAHRHEHGRV*KSSAGSQDSMPETS
Trigger: TGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCCTGTGGGCCTCTCTGGCAGGAACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR CCA 90 bp CTTGCTGAGACAGCTCCTCCTCCACTCCAACCCCATGTTTCATTCTaGGGTCTACACGTTCTTCCACACTGCCCAATCCCCAGGTTATGG +
Preference number: 1 (lower is better)
Translates to: LAETAPPPLQPHVSF*GLHVLPHCPIPRLW
Trigger: CCATAACCTGGGGATTGGGCAGTGTGGAAGAACGTGTAGACCCCAGAATGAAACATGGGGTTGGAGTGGAGGAGGAGCTGTCTCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 90 bp CCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATGAGGAATaGAGGGTTTCCATACCCGTCCTGAGCCATCCACTTGGGATTCAC +
Preference number: 1 (lower is better)
Translates to: PGAQLANGLPSTYEE*RVSIPVLSHPLGIH
Trigger: GTGAATCCCAAGTGGATGGCTCAGGACGGGTATGGAAACCCTTCATTCCTCATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR CCA 90 bp TCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGTaGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAG +
Preference number: 1 (lower is better)
Translates to: SVTEDVPLYPEWCML*RYPASRPNVRKPQE
Trigger: CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR GCA 90 bp AAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTaGATGGGAAAGTTTGTATGTTGGATAAAGTGTGGTTCACCCTCA +
Preference number: 1 (lower is better)
Translates to: KHLVPRSKPTAHQRS*MGKFVCWIKCGSPS
Trigger: TGAGGGTGAACCACACTTTATCCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR GCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTaGATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAG +
Preference number: 1 (lower is better)
Translates to: TTSSVTEDVPLYPEW*MLWRYPASRPNVRK
Trigger: CTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR CCA 90 bp ATGACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATaGTGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGA +
Preference number: 1 (lower is better)
Translates to: MTTSSVTEDVPLYPE*CMLWRYPASRPNVR
Trigger: TCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 90 bp AACCAGGCAAAGCCCAGGGCTTCATCATCCTCTTTGGACTTCGGATaGGAGAATAAGTTTAGTCCCTTTCTAGAGCTAGAACCTTCTCGG +
Preference number: 1 (lower is better)
Translates to: NQAKPRASSSSLDFG*ENKFSPFLELEPSR
Trigger: CCGAGAAGGTTCTAGCTCTAGAAAGGGACTAAACTTATTCTCTCATCCGAAGTCCAAAGAGGATGATGAAGCCCTGGGCTTTGCCTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGCAAACTCCCTGCCACTaGCTGTTCACCGTGGACCCG +
Preference number: 2 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRQTPCH*LFTVDP
Trigger: CGGGTCCACGGTGAACAGTCAGTGGCAGGGAGTTTG...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR CAA 90 bp TCCAGTTCCTTCTCAAGGCCAGCCCCACCGACGCGGAGCATGGTCTaGGCAAACTCCCTGCCACTGACTGTTCACCGTGGACCCGGGCTC +
Preference number: 2 (lower is better)
Translates to: SSSFSRPAPPTRSMV*ANSLPLTVHRGPGL
Trigger: GAGCCCGGGTCCACGGTGAACAGTCAGTGGCAGGGAGTTTGCCAAGACCATGCTCCGCGTCGGTGGGGCTGGCCTTGAGAAGGAACTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGGGCTGTTTCCCACCATaGGAAGCGAGTCTGGTCTGT +
Preference number: 2 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRGCFPP*EASLVC
Trigger: ACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCC...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGCTAGAACCTTCTCGGTaGCTGTTTCCCACCATGGGA +
Preference number: 2 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRLEPSR*LFPTMG
Trigger: TCCCATGGTGGGAAACAGCCACCGAGAAGGTTCTAG...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCCAAACTCCCTGCCACTaGCTGTTCACCGTGGACCCG +
Preference number: 2 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIQTPCH*LFTVDP
Trigger: CGGGTCCACGGTGAACAGTCAGTGGCAGGGAGTTTG...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCCAAACTCCCTGCCACTaGCTGTTCACCGTGGACCCG +
Preference number: 2 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSQTPCH*LFTVDP
Trigger: CGGGTCCACGGTGAACAGTCAGTGGCAGGGAGTTTG...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCACTGACTGTTCACCGTaGACCCGGGCTCTATACAGC +
Preference number: 2 (lower is better)
Translates to: RGILPRPECLHPDAQPQVTDCSP*TRALYS
Trigger: GCTGTATAGAGCCCGGGTCCACGGTGAACAGTCAGT...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTGGCTGTTTCCCACCATaGGAAGCGAGTCTGGTCTGT +
Preference number: 2 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPGCFPP*EASLVC
Trigger: ACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCC...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCGAGTCTGGTCTGTGGTaGGGAAGCATGAAGCTCACA +
Preference number: 2 (lower is better)
Translates to: RGILPRPECLHPDAQPQVESGLW*GSMKLT
Trigger: TGTGAGCTTCATGCTTCCTCACCACAGACCAGACTC...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCGTTATGGGGGTTGACTaGGGGGAGGAAATCTCCCGC +
Preference number: 2 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIVMGVD*GEEISR
Trigger: GCGGGAGATTTCCTCCCCTCAGTCAACCCCCATAAC...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATCTACCCAGGCCTGAGTaGCTCCATCCAGATGCACAG +
Preference number: 2 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYLPRPE*LHPDAQ
Trigger: CTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAG...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGGGGTCTCTCCCTCCGTaGCAGAGGAATCCTACCCAG +
Preference number: 2 (lower is better)
Translates to: ESRLREARTLCQKLHTGEGSLPP*QRNPTQ
Trigger: CTGGGTAGGATTCCTCTGGCACGGAGGGAGAGACCC...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGCTTCCTCCCCAGGCCTaGCGCTCAGCTTGCAAATGG +
Preference number: 2 (lower is better)
Translates to: ESRLREARTLCQKLHTGELPPQA*RSACKW
Trigger: CCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAG...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGCTACCCAGGCCTGAGTaGCTCCATCCAGATGCACAG +
Preference number: 2 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMLPRPE*LHPDAQ
Trigger: CTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAG...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGGCATTGGGAATCTCATaGGGGCGCACCCCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: ESRLREARTLCQKLHTGEALGIS*GRTPVP
Trigger: AGGAACTGGGGTGCGCCCCCATGAGATTCCCAATGC...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp ACCCATCCCCAACCCGAACACAACACAAATGCACCCCTGCTCCTTGTTCTCACAGTTATGGGGGTTGACTaGGGGGAGGAAATCTCCCGC +
Preference number: 2 (lower is better)
Translates to: THPQPEHNTNAPLLLVLTVMGVD*GEEISR
Trigger: GCGGGAGATTTCCTCCCCTCAGTCAACCCCCATAAC...TGTGAGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCGGGTTGGGGATGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCTTTCCATACCCGTCCTaGGCCATCCACTTGGGATTC +
Preference number: 2 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSFPYPS*AIHLGF
Trigger: GAATCCCAAGTGGATGGCTCAGGACGGGTATGGAAA...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGAGGTGTGAGCCACCATaGCTGGCCAAGGTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: CMLWRYPASRPNVRKPQERCEPP*LAKVGV
Trigger: CACCCCAACCTTGGCCAGGCATGGTGGCTCACACCT...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATATGAAGCTCACATGCTaGAATCGGGGTAGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYMKLTC*NRGRAG
Trigger: CCCAGCTCTACCCCGATTCCAGCATGTGAGCTTCAT...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACGCATTGGGAATCTCATaGGGGCGCACCCCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNALGIS*GRTPVP
Trigger: AGGAACTGGGGTGCGCCCCCATGAGATTCCCAATGC...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGGGGTGGAACCGCCTTTaGCAAGAAAACACGCCCCAT +
Preference number: 2 (lower is better)
Translates to: ESRLREARTLCQKLHTGEGWNRL*QENTPH
Trigger: ATGGGGCGTGTTTTCTTGCCAAAGGCGGTTCCACCC...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACCCAGGTTATGGGGGTTaGCTGAGGGGAGGAAATCTC +
Preference number: 2 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNPGYGG*LRGGNL
Trigger: GAGATTTCCTCCCCTCAGTCAACCCCCATAACCTGG...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATTGGCCAAGGTTGGGGTaGTTTAAGGGAGTACACAGA +
Preference number: 2 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYWPRLG*FKGVHR
Trigger: TCTGTGTACTCCCTTAAATCACCCCAACCTTGGCCA...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCAGCATGAAGCTCACATaGTGGAATCGGGGTAGAGCT +
Preference number: 2 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPISMKLT*WNRGRA
Trigger: AGCTCTACCCCGATTCCAGCATGTGAGCTTCATGCT...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGAAATGTGCGTGCATCTaGAGCCCAAGCCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: ESRLREARTLCQKLHTGEKCACI*SPSLFL
Trigger: GAGGAAGAGGCTTGGGCTGCAGATGCACGCACATTT...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCATGAAGCTCACATGCTaGAATCGGGGTAGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: GMNMAECESRLREARTLCMKLTC*NRGRAG
Trigger: CCCAGCTCTACCCCGATTCCAGCATGTGAGCTTCAT...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGATGAAGCTCACATGCTaGAATCGGGGTAGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMMKLTC*NRGRAG
Trigger: CCCAGCTCTACCCCGATTCCAGCATGTGAGCTTCAT...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp ACCCATCCCCAACCCGAACACAACACAAATGCACCCCTGCTCCTTGTTCTCACAGGCTGTTTCCCACCATaGGAAGCGAGTCTGGTCTGT +
Preference number: 2 (lower is better)
Translates to: THPQPEHNTNAPLLLVLTGCFPP*EASLVC
Trigger: ACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCC...TGTGAGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCGGGTTGGGGATGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCTAGAACCTTCTCGGTaGCTGTTTCCCACCATGGGA +
Preference number: 2 (lower is better)
Translates to: GMNMAECESRLREARTLCLEPSR*LFPTMG
Trigger: TCCCATGGTGGGAAACAGCCACCGAGAAGGTTCTAG...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp ACCCATCCCCAACCCGAACACAACACAAATGCACCCCTGCTCCTTGTTCTCACACACGTTCTTCCACACTaGCCAATCCCCAGGTTATGG +
Preference number: 2 (lower is better)
Translates to: THPQPEHNTNAPLLLVLTHVLPH*PIPRLW
Trigger: CCATAACCTGGGGATTGGGCAGTGTGGAAGAACGTG...TGTGAGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCGGGTTGGGGATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCCGAACACAACACAAATaGACCCCTGCTCCTTGTTCT +
Preference number: 2 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSRTQHK*TPAPCS
Trigger: AGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCG...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACAAATGTGCGTGCATCTaGAGCCCAAGCCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNKCACI*SPSLFL
Trigger: GAGGAAGAGGCTTGGGCTGCAGATGCACGCACATTT...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGGTGCATCAGAGTTCCTaGCAGAGAGGCCCACAGGCA +
Preference number: 2 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLVHQSS*QRGPQA
Trigger: TGCCTGTGGGCCTCTCTGGCAGGAACTCTGATGCAC...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp ACCCATCCCCAACCCGAACACAACACAAATGCACCCCTGCTCCTTGTTCTCACACTAGAACCTTCTCGGTaGCTGTTTCCCACCATGGGA +
Preference number: 2 (lower is better)
Translates to: THPQPEHNTNAPLLLVLTLEPSR*LFPTMG
Trigger: TCCCATGGTGGGAAACAGCCACCGAGAAGGTTCTAG...TGTGAGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCGGGTTGGGGATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCCCCCATGTTTCATTCTaGGGTCTACACGTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIPHVSF*GLHVLP
Trigger: TGGAAGAACGTGTAGACCCCAGAATGAAACATGGGG...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGGAAAGCCCATGGCATTaGGAATCTCATGGGGGCGCA +
Preference number: 2 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEESPWH*ESHGGA
Trigger: TGCGCCCCCATGAGATTCCCAATGCCATGGGCTTTC...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGAGCCACAGGAGTACATaGGCCTCGCGGTGCATCAGA +
Preference number: 2 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLSHRST*ASRCIR
Trigger: TCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCT...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTCCCTCACCACGGCCATaGCTCTCTGTCACTGCTCCC +
Preference number: 2 (lower is better)
Translates to: HQNVILLCFRALIPERNTPSPRP*LSVTAP
Trigger: GGGAGCAGTGACAGAGAGTCATGGCCGTGGTGAGGG...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACAGCATGAAGCTCACATaGTGGAATCGGGGTAGAGCT +
Preference number: 2 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNSMKLT*WNRGRA
Trigger: AGCTCTACCCCGATTCCAGCATGTGAGCTTCATGCT...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGAAAAACAAATGTGCGTaGATCTGCAGCCCAAGCCTC +
Preference number: 2 (lower is better)
Translates to: ESRLREARTLCQKLHTGEKNKCA*ICSPSL
Trigger: GAGGCTTGGGCTGCAGATGCACGCACATTTGTTTTT...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGCATGGGAAGCGAGTCTaGTCTGTGGTGAGGAAGCAT +
Preference number: 2 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEHGKRV*SVVRKH
Trigger: ATGCTTCCTCACCACAGACCAGACTCGCTTCCCATG...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTCTTCATCATCCTCTTTaGACTTCGGATGAGAGAATA +
Preference number: 2 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPLHHPL*TSDERI
Trigger: TATTCTCTCATCCGAAGTCCAAAGAGGATGATGAAG...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCGGAACACAACAAATGTaGAGAAGGAGAGTCAGTAGC +
Preference number: 2 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSGTQQM*RRRVSS
Trigger: GCTACTGACTCTCCTTCTCCACATTTGTTGTGTTCC...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGGGGTGGAACCGCCTTTaGCAAGAAAACACGCCCCAT +
Preference number: 2 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLGWNRL*QENTPH
Trigger: ATGGGGCGTGTTTTCTTGCCAAAGGCGGTTCCACCC...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGATACAATCACGAGGGTaGAACCGCCTTTGGCAAGAA +
Preference number: 2 (lower is better)
Translates to: ESRLREARTLCQKLHTGEIQSRG*NRLWQE
Trigger: TTCTTGCCAAAGGCGGTTCCACCCTCGTGATTGTAT...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCAATCCTACCCAGGCCTaGGTGCCTCCATCCAGATGC +
Preference number: 2 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPNPTQA*VPPSRC
Trigger: GCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATT...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCACGCCCCATTACCCATaGGAGAGCTGCACAGGAGAG +
Preference number: 2 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPTPHYP*ESCTGE
Trigger: CTCTCCTGTGCAGCTCTCTCATGGGTAATGGGGCGT...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTGTGCCTCCATCCAGATaGACAGCCCCAGGTCTCCTC +
Preference number: 2 (lower is better)
Translates to: HQNVILLCFRALIPERNTVPPSR*TAPGLL
Trigger: GAGGAGACCTGGGGCTGTGCATCTGGATGGAGGCAC...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACACACTCCCGCGCCCACTaGAGGCCCTTCCCATGCTCA +
Preference number: 2 (lower is better)
Translates to: IQQQMKRPNVHYREALGTHSRAH*RPFPCS
Trigger: TGAGCATGGGAAGGGCCTGCAGTGGGCGCGGGAGTG...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACACACAAATGCACCCCTaGTCCTTGTTCTCACATCAC +
Preference number: 2 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNTQMHP*SLFSHH
Trigger: GTGATGTGAGAACAAGGAGCAGGGGTGCATTTGTGT...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGAGTGTGAAAGTCGTCTaGGGGAAGCCAGGACTCTAT +
Preference number: 2 (lower is better)
Translates to: CMLWRYPASRPNVRKPQESVKVV*GKPGLY
Trigger: ATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACT...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGTGTGGTGAGGAAGCATaGAGCTCACATGCTGGAATC +
Preference number: 2 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLCGEEA*SSHAGI
Trigger: GATTCCAGCATGTGAGCTTCATGCTTCCTCACCACA...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGTGGCCAAGGTTGGGGTaGTTTAAGGGAGTACACAGA +
Preference number: 2 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLWPRLG*FKGVHR
Trigger: TCTGTGTACTCCCTTAAATCACCCCAACCTTGGCCA...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGAAAAACAAATGTGCGTaGATCTGCAGCCCAAGCCTC +
Preference number: 2 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEKNKCA*ICSPSL
Trigger: GAGGCTTGGGCTGCAGATGCACGCACATTTGTTTTT...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCCCAAAGAATTCACACTaGGAGAGACATGAGAAAACA +
Preference number: 2 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSPKNSH*ERHEKT
Trigger: TGTTTTCTCATGTCTCTCCCAGTGTGAATTCTTTGG...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTACACACGTGTATCTaGATTTCTTCAGGTTTGGGG +
Preference number: 2 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNLHTCI*ISSGLG
Trigger: CCCCAAACCTGAAGAAATTCAGATACACGTGTGTAA...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCCACGTTCTTCCACACTaGCCAATCCCCAGGTTATGG +
Preference number: 2 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPHVLPH*PIPRLW
Trigger: CCATAACCTGGGGATTGGGCAGTGTGGAAGAACGTG...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGACACAAATGCACCCCTaGTCCTTGTTCTCACATCAC +
Preference number: 2 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWTQMHP*SLFSHH
Trigger: GTGATGTGAGAACAAGGAGCAGGGGTGCATTTGTGT...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCATGACTCTCTGTCACTaGTCCCAACCTGGAGCTCCT +
Preference number: 2 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPMTLCH*SQPGAP
Trigger: AGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCAT...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCAAATGTGCGTGCATCTaGAGCCCAAGCCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPKCACI*SPSLFL
Trigger: GAGGAAGAGGCTTGGGCTGCAGATGCACGCACATTT...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACACACCGACGCGGAGCATaGTCTTGGCAAACTCCCTGC +
Preference number: 2 (lower is better)
Translates to: IQQQMKRPNVHYREALGTHRRGA*SWQTPC
Trigger: GCAGGGAGTTTGCCAAGACCATGCTCCGCGTCGGTG...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCTTCATCATCCTCTTTaGACTTCGGATGAGAGAATA +
Preference number: 2 (lower is better)
Translates to: GMNMAECESRLREARTLCLHHPL*TSDERI
Trigger: TATTCTCTCATCCGAAGTCCAAAGAGGATGATGAAG...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTGAAAGCCCATGGCATTaGGAATCTCATGGGGGCGCA +
Preference number: 2 (lower is better)
Translates to: HQNVILLCFRALIPERNTESPWH*ESHGGA
Trigger: TGCGCCCCCATGAGATTCCCAATGCCATGGGCTTTC...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGATGTTGGATAAAGTGTaGTTCACCCTCAAAACTAGC +
Preference number: 2 (lower is better)
Translates to: ESRLREARTLCQKLHTGEMLDKV*FTLKTS
Trigger: GCTAGTTTTGAGGGTGAACCACACTTTATCCAACAT...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGCCAAAGAATTCACACTaGGAGAGACATGAGAAAACA +
Preference number: 2 (lower is better)
Translates to: ESRLREARTLCQKLHTGEPKNSH*ERHEKT
Trigger: TGTTTTCTCATGTCTCTCCCAGTGTGAATTCTTTGG...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACAAATCCTACCCAGGCCTaGGTGCCTCCATCCAGATGC +
Preference number: 2 (lower is better)
Translates to: IQQQMKRPNVHYREALGTNPTQA*VPPSRC
Trigger: GCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATT...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAACACCGACGCGGAGCATaGTCTTGGCAAACTCCCTGC +
Preference number: 2 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKHRRGA*SWQTPC
Trigger: GCAGGGAGTTTGCCAAGACCATGCTCCGCGTCGGTG...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTCATGGGAAGCGAGTCTaGTCTGTGGTGAGGAAGCAT +
Preference number: 2 (lower is better)
Translates to: HQNVILLCFRALIPERNTHGKRV*SVVRKH
Trigger: ATGCTTCCTCACCACAGACCAGACTCGCTTCCCATG...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGACTTCCTCCCCAGGCCTaGCGCTCAGCTTGCAAATGG +
Preference number: 2 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGLPPQA*RSACKW
Trigger: CCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAG...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACATGTTGGATAAAGTGTaGTTCACCCTCAAAACTAGC +
Preference number: 2 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNMLDKV*FTLKTS
Trigger: GCTAGTTTTGAGGGTGAACCACACTTTATCCAACAT...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGAGGAAAACTTTCCCTTaGAGATCAGAGCTCACTGAT +
Preference number: 2 (lower is better)
Translates to: CMLWRYPASRPNVRKPQERKTFP*RSELTD
Trigger: ATCAGTGAGCTCTGATCTCCAAGGGAAAGTTTTCCT...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTCCCCTGTACCCAGAATaGTGCATGCTGTGGAGATAC +
Preference number: 2 (lower is better)
Translates to: HQNVILLCFRALIPERNTPLYPE*CMLWRY
Trigger: GTATCTCCACAGCATGCACCATTCTGGGTACAGGGG...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTTGTGGTGAGGAAGCATaGAGCTCACATGCTGGAATC +
Preference number: 2 (lower is better)
Translates to: HQNVILLCFRALIPERNTCGEEA*SSHAGI
Trigger: GATTCCAGCATGTGAGCTTCATGCTTCCTCACCACA...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAGTTATGGGGGTTGACTaGGGGGAGGAAATCTCCCGC +
Preference number: 2 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGVMGVD*GEEISR
Trigger: GCGGGAGATTTCCTCCCCTCAGTCAACCCCCATAAC...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGGCATTCAGCAACAAATaGAACGTCCTAATGTGCACT +
Preference number: 2 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLAFSNK*NVLMCT
Trigger: AGTGCACATTAGGACGTTTCATTTGTTGCTGAATGC...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAACGCCCCATTACCCATaGGAGAGCTGCACAGGAGAG +
Preference number: 2 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKTPHYP*ESCTGE
Trigger: CTCTCCTGTGCAGCTCTCTCATGGGTAATGGGGCGT...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTGAAGCCAGGACTCTATaGCAGAAACTTCACACTGGG +
Preference number: 2 (lower is better)
Translates to: HQNVILLCFRALIPERNTEARTL*QKLHTG
Trigger: CCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTC...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAGTGCATCAGAGTTCCTaGCAGAGAGGCCCACAGGCA +
Preference number: 2 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKVHQSS*QRGPQA
Trigger: TGCCTGTGGGCCTCTCTGGCAGGAACTCTGATGCAC...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACAACTGACTGTTCACCGTaGACCCGGGCTCTATACAGC +
Preference number: 2 (lower is better)
Translates to: IQQQMKRPNVHYREALGTTDCSP*TRALYS
Trigger: GCTGTATAGAGCCCGGGTCCACGGTGAACAGTCAGT...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCCCCCATGTTTCATTCTaGGGTCTACACGTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPPHVSF*GLHVLP
Trigger: TGGAAGAACGTGTAGACCCCAGAATGAAACATGGGG...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAACCAGGTTATGGGGGTTaGCTGAGGGGAGGAAATCTC +
Preference number: 2 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKPGYGG*LRGGNL
Trigger: GAGATTTCCTCCCCTCAGTCAACCCCCATAACCTGG...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGACCAGGTTATGGGGGTTaGCTGAGGGGAGGAAATCTC +
Preference number: 2 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGPGYGG*LRGGNL
Trigger: GAGATTTCCTCCCCTCAGTCAACCCCCATAACCTGG...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAACTGACTGTTCACCGTaGACCCGGGCTCTATACAGC +
Preference number: 2 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKTDCSP*TRALYS
Trigger: GCTGTATAGAGCCCGGGTCCACGGTGAACAGTCAGT...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTCCCCATGTTTCATTCTaGGGTCTACACGTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: HQNVILLCFRALIPERNTPHVSF*GLHVLP
Trigger: TGGAAGAACGTGTAGACCCCAGAATGAAACATGGGG...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAGGGTGGAACCGCCTTTaGCAAGAAAACACGCCCCAT +
Preference number: 2 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKGWNRL*QENTPH
Trigger: ATGGGGCGTGTTTTCTTGCCAAAGGCGGTTCCACCC...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAGAGTCTGGTCTGTGGTaGGGAAGCATGAAGCTCACA +
Preference number: 2 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKESGLW*GSMKLT
Trigger: TGTGAGCTTCATGCTTCCTCACCACAGACCAGACTC...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCTCTTTGGACTTCGGATaGGAGAATAAGTTTAGTCCC +
Preference number: 2 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPSLDFG*ENKFSP
Trigger: GGGACTAAACTTATTCTCTCATCCGAAGTCCAAAGA...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAACATGGGAAGCGAGTCTaGTCTGTGGTGAGGAAGCAT +
Preference number: 2 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKHGKRV*SVVRKH
Trigger: ATGCTTCCTCACCACAGACCAGACTCGCTTCCCATG...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAGTAATCCGAACACTTTaGGAGGTGGAGGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKVIRTL*EVEAGG
Trigger: TCCTCCTGCCTCCACCTCCCAAAGTGTTCGGATTAC...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTTTCAAGGGCAACAAATaGGACAAAACCTTCGGTGCA +
Preference number: 2 (lower is better)
Translates to: HQNVILLCFRALIPERNTFKGNK*DKTFGA
Trigger: TGCACCGAAGGTTTTGTCCCATTTGTTGCCCTTGAA...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGATGGCCAAGGTTGGGGTaGTTTAAGGGAGTACACAGA +
Preference number: 2 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGWPRLG*FKGVHR
Trigger: TCTGTGTACTCCCTTAAATCACCCCAACCTTGGCCA...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTTTACACACGTGTATCTaGATTTCTTCAGGTTTGGGG +
Preference number: 2 (lower is better)
Translates to: HQNVILLCFRALIPERNTLHTCI*ISSGLG
Trigger: CCCCAAACCTGAAGAAATTCAGATACACGTGTGTAA...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACACGAACACAACACAAATaGACCCCTGCTCCTTGTTCT +
Preference number: 2 (lower is better)
Translates to: IQQQMKRPNVHYREALGTRTQHK*TPAPCS
Trigger: AGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCG...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAGAAGCCAGGACTCTATaGCAGAAACTTCACACTGGG +
Preference number: 2 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGEARTL*QKLHTG
Trigger: CCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTC...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAAGTACCTATGAGGAATaGAGGGTTTCCATACCCGTC +
Preference number: 2 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKSTYEE*RVSIPV
Trigger: GACGGGTATGGAAACCCTTCATTCCTCATAGGTACT...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAAGTACCTATGAGGAATaGAGGGTTTCCATACCCGTC +
Preference number: 2 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGSTYEE*RVSIPV
Trigger: GACGGGTATGGAAACCCTTCATTCCTCATAGGTACT...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAACACTGGGAGAGACATaGGAAAACAGCAAATGCAGG +
Preference number: 2 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGTLGET*ENSKCR
Trigger: CCTGCATTTGCTGTTTTCTCATGTCTCTCCCAGTGT...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAACACAAATGCACCCCTaGTCCTTGTTCTCACATCAC +
Preference number: 2 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGTQMHP*SLFSHH
Trigger: GTGATGTGAGAACAAGGAGCAGGGGTGCATTTGTGT...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR GCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAGGGAGAAATCCTCAGTaGAATCAGTGTAGAAATGCC +
Preference number: 2 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGGRNPQ*NQCRNA
Trigger: GGCATTTCTACACTGATTGCACTGAGGATTTCTCCC...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAGGAACACAACAAATGTaGAGAAGGAGAGTCAGTAGC +
Preference number: 2 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKGTQQM*RRRVSS
Trigger: GCTACTGACTCTCCTTCTCCACATTTGTTGTGTTCC...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAGGAACACAACAAATGTaGAGAAGGAGAGTCAGTAGC +
Preference number: 2 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGGTQQM*RRRVSS
Trigger: GCTACTGACTCTCCTTCTCCACATTTGTTGTGTTCC...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGATCTTTGGACTTCGGATaGGAGAATAAGTTTAGTCCC +
Preference number: 2 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGSLDFG*ENKFSP
Trigger: GGGACTAAACTTATTCTCTCATCCGAAGTCCAAAGA...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR TCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAGCATTCAGCAACAAATaGAACGTCCTAATGTGCACT +
Preference number: 2 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGAFSNK*NVLMCT
Trigger: AGTGCACATTAGGACGTTTCATTTGTTGCTGAATGC...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAACCAGAGAAGCTGCATaGGAAAGTTTGTATGTTGGA +
Preference number: 2 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGTREAA*ESLYVG
Trigger: TCCAACATACAAACTTTCCCATGCAGCTTCTCTGGT...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAAGGAAAACTTTCCCTTaGAGATCAGAGCTCACTGAT +
Preference number: 2 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGRKTFP*RSELTD
Trigger: ATCAGTGAGCTCTGATCTCCAAGGGAAAGTTTTCCT...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAACTTCATCATCCTCTTTaGACTTCGGATGAGAGAATA +
Preference number: 2 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKLHHPL*TSDERI
Trigger: TATTCTCTCATCCGAAGTCCAAAGAGGATGATGAAG...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 72 bp TCTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTaGGTGCCTCCATCCAGATGCACAGCCCCAGGTCTC +
Preference number: 3 (lower is better)
Translates to: SLPPCQRNPTQA*VPPSRCTAPGL
Trigger: GAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR GCA 72 bp TCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTaGCTCCATCCAGATGCACAGCCCCAGGTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: SLRARGILPRPE*LHPDAQPQVSS
Trigger: AGAGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CAA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGACGCGGAGCATGGTCTaGGCAAACTCCCTGCCACTG +
Preference number: 3 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRTRSMV*ANSLPL
Trigger: CAGTGGCAGGGAGTTTGCCAAGACCATGCTCCGCGT...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 72 bp CGACGCGGAGCATGGTCTTGGCAAACTCCCTGCCACTaGCTGTTCACCGTGGACCCGGGCTCTATACAGCTT +
Preference number: 3 (lower is better)
Translates to: RRGAWSWQTPCH*LFTVDPGSIQL
Trigger: AAGCTGTATAGAGCCCGGGTCCACGGTGAACAGTCAGTGGCAGGGAGTTTGCCAAGACCATGCTCCGCGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR CCA 72 bp GGTCTTGGCAAACTCCCTGCCACTGACTGTTCACCGTaGACCCGGGCTCTATACAGCTTCCACCTCGAGGCA +
Preference number: 3 (lower is better)
Translates to: GLGKLPATDCSP*TRALYSFHLEA
Trigger: TGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGTGAACAGTCAGTGGCAGGGAGTTTGCCAAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CAA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCACGCGGAGCATGGTCTaGGCAAACTCCCTGCCACTG +
Preference number: 3 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPITRSMV*ANSLPL
Trigger: CAGTGGCAGGGAGTTTGCCAAGACCATGCTCCGCGT...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CAA 90 bp GCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATGAAGCTACGCGGAGCATGGTCTaGGCAAACTCCCTGCCACTG +
Preference number: 3 (lower is better)
Translates to: AVSHHGKRVWSVVRKHEATRSMV*ANSLPL
Trigger: CAGTGGCAGGGAGTTTGCCAAGACCATGCTCCGCGT...AGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 72 bp CTCCATCCAGATGCACAGCCCCAGGTCTCCTCTTGCTaGGACAGCTCCTCCTCCACTCCAACCCCATGTTTC +
Preference number: 3 (lower is better)
Translates to: LHPDAQPQVSSC*DSSSSTPTPCF
Trigger: GAAACATGGGGTTGGAGTGGAGGAGGAGCTGTCTCAGCAAGAGGAGACCTGGGGCTGTGCATCTGGATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 72 bp GAGCCATCCACTTGGGATTCACCCTCACCACGGCCATaGCTCTCTGTCACTGCTCCCAACCTGGAGCTCCTA +
Preference number: 3 (lower is better)
Translates to: EPSTWDSPSPRP*LSVTAPNLELL
Trigger: TAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGTGAGGGTGAATCCCAAGTGGATGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 72 bp GCCAGAGAGGCCCACAGGCATGAACATGGCAGAGTGTaGAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCA +
Preference number: 3 (lower is better)
Translates to: AREAHRHEHGRV*KSSAGSQDSMP
Trigger: TGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCCTGTGGGCCTCTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR GCA 72 bp GGATTCACCCTCACCACGGCCATGACTCTCTGTCACTaGTCCCAACCTGGAGCTCCTAAACCCATCCCCAAC +
Preference number: 3 (lower is better)
Translates to: GFTLTTAMTLCH*SQPGAPKPIPN
Trigger: GTTGGGGATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGTGAGGGTGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CAA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACGGAAAGCCCATGGCATaGGGAATCTCATGGGGGCGC +
Preference number: 3 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNGKPMA*GISWGR
Trigger: GCGCCCCCATGAGATTCCCAATGCCATGGGCTTTCC...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 72 bp CCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATaGAGCTCACATGCTGGAATCGGGGTAGAGCTGGGT +
Preference number: 3 (lower is better)
Translates to: PWEASLVCGEEA*SSHAGIGVELG
Trigger: ACCCAGCTCTACCCCGATTCCAGCATGTGAGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 72 bp CTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTaGGGAAGCATGAAGCTCACATGCTGGAATCGGGGT +
Preference number: 3 (lower is better)
Translates to: LFPTMGSESGLW*GSMKLTCWNRG
Trigger: ACCCCGATTCCAGCATGTGAGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 72 bp GTACCTATGAGGAATGAAGGGTTTCCATACCCGTCCTaGGCCATCCACTTGGGATTCACCCTCACCACGGCC +
Preference number: 3 (lower is better)
Translates to: VPMRNEGFPYPS*AIHLGFTLTTA
Trigger: GGCCGTGGTGAGGGTGAATCCCAAGTGGATGGCTCAGGACGGGTATGGAAACCCTTCATTCCTCATAGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR CCA 72 bp TTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTaGTCTGTGGTGAGGAAGCATGAAGCTCACATGCTG +
Preference number: 3 (lower is better)
Translates to: FSVAVSHHGKRV*SVVRKHEAHML
Trigger: CAGCATGTGAGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR CCA 72 bp ACAGCTCCTCCTCCACTCCAACCCCATGTTTCATTCTaGGGTCTACACGTTCTTCCACACTGCCCAATCCCC +
Preference number: 3 (lower is better)
Translates to: TAPPPLQPHVSF*GLHVLPHCPIP
Trigger: GGGGATTGGGCAGTGTGGAAGAACGTGTAGACCCCAGAATGAAACATGGGGTTGGAGTGGAGGAGGAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CAA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGGGCCTGGCGCTCAGCTaGCAAATGGACTTCCCAGTA +
Preference number: 3 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLGLALS*QMDFPV
Trigger: TACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCC...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 72 bp TGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATaGGGAATGAAGGGTTTCCATACCCGTCCTGAGCCA +
Preference number: 3 (lower is better)
Translates to: WRSACKWTSQYL*GMKGFHTRPEP
Trigger: TGGCTCAGGACGGGTATGGAAACCCTTCATTCCTCATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR CCA 72 bp GAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGTaGAGATACCCTGCAAGTAGACCGAATGTGAGAAAG +
Preference number: 3 (lower is better)
Translates to: EDVPLYPEWCML*RYPASRPNVRK
Trigger: CTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCACCATTCTGGGTACAGGGGGACATCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR CCA 72 bp TCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATaGTGCATGCTGTGGAGATACCCTGCAAGTAGACCG +
Preference number: 3 (lower is better)
Translates to: SSVTEDVPLYPE*CMLWRYPASRP
Trigger: CGGTCTACTTGCAGGGTATCTCCACAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CAA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCGGAAAGCCCATGGCATaGGGAATCTCATGGGGGCGC +
Preference number: 3 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPGKPMA*GISWGR
Trigger: GCGCCCCCATGAGATTCCCAATGCCATGGGCTTTCC...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR GCA 72 bp TCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTaGATGCTGTGGAGATACCCTGCAAGTAGACCGAAT +
Preference number: 3 (lower is better)
Translates to: SVTEDVPLYPEW*MLWRYPASRPN
Trigger: ATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR CCA 72 bp AAGTTTAGTCCCTTTCTAGAGCTAGAACCTTCTCGGTaGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTG +
Preference number: 3 (lower is better)
Translates to: KFSPFLELEPSR*LFPTMGSESGL
Trigger: CAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGTTCTAGCTCTAGAAAGGGACTAAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR CCA 72 bp TTCATACAGGAGAAGAGCCCTATACAATCACGAGGGTaGAACCGCCTTTGGCAAGAAAACACGCCCCATTAC +
Preference number: 3 (lower is better)
Translates to: FIQEKSPIQSRG*NRLWQENTPHY
Trigger: GTAATGGGGCGTGTTTTCTTGCCAAAGGCGGTTCCACCCTCGTGATTGTATAGGGCTCTTCTCCTGTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CAA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAGGCCTGGCGCTCAGCTaGCAAATGGACTTCCCAGTA +
Preference number: 3 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGGLALS*QMDFPV
Trigger: TACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCC...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CAA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGGGGAAAGTTTGTATGTaGGATAAAGTGTGGTTCACC +
Preference number: 3 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLGKVCM*DKVWFT
Trigger: GGTGAACCACACTTTATCCAACATACAAACTTTCCC...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR CCA 72 bp CAAACCAGGCAAAGCCCAGGGCTTCATCATCCTCTTTaGACTTCGGATGAGAGAATAAGTTTAGTCCCTTTC +
Preference number: 3 (lower is better)
Translates to: QTRQSPGLHHPL*TSDERISLVPF
Trigger: GAAAGGGACTAAACTTATTCTCTCATCCGAAGTCCAAAGAGGATGATGAAGCCCTGGGCTTTGCCTGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CAA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAATGTAATCCGAACACTTaGGGAGGTGGAGGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKCNPNT*GGGGRR
Trigger: CCTCCTGCCTCCACCTCCCAAAGTGTTCGGATTACA...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR GCA 72 bp ATAATTCAAGGGCAACAAATGGGACAAAACCTTCGGTaGAGGTCAGCTCTCACTCGACATAAGAGAAACCAC +
Preference number: 3 (lower is better)
Translates to: IIQGQQMGQNLR*RSALTRHKRNH
Trigger: GTGGTTTCTCTTATGTCGAGTGAGAGCTGACCTGCACCGAAGGTTTTGTCCCATTTGTTGCCCTTGAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 72 bp AAGCCCAGGGCTTCATCATCCTCTTTGGACTTCGGATaGGAGAATAAGTTTAGTCCCTTTCTAGAGCTAGAA +
Preference number: 3 (lower is better)
Translates to: KPRASSSSLDFG*ENKFSPFLELE
Trigger: TTCTAGCTCTAGAAAGGGACTAAACTTATTCTCTCATCCGAAGTCCAAAGAGGATGATGAAGCCCTGGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR TCA 72 bp CTCTTCTGTAGAAGTCTCAACACAGTGGACCACAGGTaGGACCTTATAAATAGGTGGTTAAAGCTTACATCA +
Preference number: 3 (lower is better)
Translates to: LFCRSLNTVDHR*DLINRWLKLTS
Trigger: TGATGTAAGCTTTAACCACCTATTTATAAGGTCTCACCTGTGGTCCACTGTGTTGAGACTTCTACAGAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR-3UTR CAA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAATGTGGAAAAGCCCTCTaGTGGAAGTCAGTTATTTGT +
Preference number: 3 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKCGKAL*WKSVIC
Trigger: ACAAATAACTGACTTCCACAAGAGGGCTTTTCCACA...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGGGCGCACCACAGGTGTaGGGCGGCAGCCCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRGAPQV*GGSPCG
Trigger: ACCACACGGGCTGCCGCCCCACACCTGTGGTGCGCC...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGCCGCGGATCAGCGCCTaGACGAAGCTCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRPRISA*TKLSAC
Trigger: GCAGGCGCTGAGCTTCGTGCAGGCGCTGATCCGCGG...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGCCAGGGCAGAGCGCCTaGTGCATGCTGTGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRPGQSA*CMLWRA
Trigger: CGCCCTCCACAGCATGCACCAGGCGCTCTGCCCTGG...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGGACGAGGGCACCTCGTaGGGGTCGCCAGACCACTGC +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRDEGTS*GSPDHC
Trigger: GCAGTGGTCTGGCGACCCCCACGAGGTGCCCTCGTC...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGCTGCATCCTCGCCCTTaGGTGGGGCTGCCACCGTGG +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRLHPRP*VGLPPW
Trigger: CCACGGTGGCAGCCCCACCCAAGGGCGAGGATGCAG...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGGGCTCCCCAGCTGTCTaGGCCGACCCACAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRGSPAV*ADPQEV
Trigger: CACTTCCTGTGGGTCGGCTCAGACAGCTGGGGAGCC...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGCCGGGCCCCCAGCCATaGTATCATCCCCACCACCTG +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRPGPQP*YHPHHL
Trigger: CAGGTGGTGGGGATGATAGCATGGCTGGGGGCCCGG...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTAGCACCCCTCTGGCCTaGTCGGGGTCCACCGTCCGC +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPSTPLA*SGSTVR
Trigger: GCGGACGGTGGACCCCGAGCAGGCCAGAGGGGTGCT...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCAGCACCCCTCTGGCCTaGTCGGGGTCCACCGTCCGC +
Preference number: 4 (lower is better)
Translates to: RGILPRPECLHPDAQPQVSTPLA*SGSTVR
Trigger: GCGGACGGTGGACCCCGAGCAGGCCAGAGGGGTGCT...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGGCTCGGGGTCGGCGTTaGCGCGGTCCAGCGCGTACA +
Preference number: 4 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRARGRR*RGPART
Trigger: TGTACGCGCTGGACCGCGTCAACGCCGACCCCGAGC...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTGCAGGGCAGAGTAGCTaGGGGTCGTGCCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPAGQSS*GSCPGP
Trigger: TGGGCCTGGGCACGACCCTCAGCTACTCTGCCCTGC...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATCTCGGGCTCTGGGTCTaGGGCAGCCACTCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSLRARGILPRPECLHPDLGLWV*GSHSSC
Trigger: GCAGCTCGAGTGGCTGCCTCAGACCCAGAGCCCGAG...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCGAGGAGCGGCGGGGCTaGCCAGGGGGAGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIEERRG*PGGGPA
Trigger: AGCTGGTCCTCCCCCTGGGCAGCCCCGCCGCTCCTC...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCGGCCCAGGAAGAGCCTaGGGGCGGCACAGACCGCGG +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIGPGRA*GRHRPR
Trigger: CCGCGGTCTGTGCCGCCCGCAGGCTCTTCCTGGGCC...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGAGTCCCGTTCCCACCTaGCCTGCTACTTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRSPVPT*PATCGP
Trigger: AGGCCCACAAGTAGCAGGGCAGGTGGGAACGGGACT...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCCCGGTCAGGTTGGCCTaGCGAGCTGCCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: RGILPRPECLHPDAQPQVPVRLA*RAASRT
Trigger: GGTCCTGGAGGCAGCTCGCCAGGCCAACCTGACCGG...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGCACCGACGCGGAGCATaGTCTTGGCAAACTCCCTGC +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRHRRGA*SWQTPC
Trigger: GCAGGGAGTTTGCCAAGACCATGCTCCGCGTCGGTG...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGCTTCCTCCCCAGGCCTaGCGCTCAGCTTGCAAATGG +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRLPPQA*RSACKW
Trigger: CCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAG...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGAGCTCGGGGTCGGCGTTaGCGCGGTCCAGCGCGTACA +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGARGRR*RGPART
Trigger: TGTACGCGCTGGACCGCGTCAACGCCGACCCCGAGC...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGATGCTCCTTCTTCAGCTaGCCGCACGCCCGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGCSFFS*PHARPA
Trigger: GGCGGGCCGGGCGTGCGGGCAGCTGAAGAAGGAGCA...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTAGCCGGTGCACGCCCTaGTCCTTCTTCAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPSRCTP*SFFSCP
Trigger: CGGGCAGCTGAAGAAGGAGCAGGGCGTGCACCGGCT...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGCCGCGGATCAGCGCCTaGACGAAGCTCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRPRISA*TKLSAC
Trigger: GCAGGCGCTGAGCTTCGTGCAGGCGCTGATCCGCGG...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGAGGGCACAGGCCTGTGTaGCCAGGGCAGAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGGHRPV*PGQSAW
Trigger: CCAGGCGCTCTGCCCTGGGCACACAGGCCTGTGCCC...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGGCCCGCAGGGCAGGCTaGACAGAGACGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRARRAG*TETRAP
Trigger: AGGTGCCCTCGTCTCTGTGCAGCCTGCCCTGCGGGC...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATTCACAGGCCTCGCAGTaGCAACAGCAGGGGACGCCC +
Preference number: 4 (lower is better)
Translates to: LSLRARGILPRPECLHPDSQASQ*QQQGTP
Trigger: GGGCGTCCCCTGCTGTTGGCACTGCGAGGCCTGTGA...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGGGCCCAGGAAGAGCCTaGGGGCGGCACAGACCGCGG +
Preference number: 4 (lower is better)
Translates to: ESRLREARTLCQKLHTGEGPGRA*GRHRPR
Trigger: CCGCGGTCTGTGCCGCCCGCAGGCTCTTCCTGGGCC...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGATCATCCCCACCACCTaGAGGGAGGTGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRIIPTT*REVRLK
Trigger: CTTCAGCCTCACCTCCCTGCAGGTGGTGGGGATGAT...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCAGCACCCCTCTGGCCTaGTCGGGGTCCACCGTCCGC +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSSTPLA*SGSTVR
Trigger: GCGGACGGTGGACCCCGAGCAGGCCAGAGGGGTGCT...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGCTACCCAGGCCTGAGTaGCTCCATCCAGATGCACAG +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRLPRPE*LHPDAQ
Trigger: CTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAG...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGGTGCATCAGAGTTCCTaGCAGAGAGGCCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRVHQSS*QRGPQA
Trigger: TGCCTGTGGGCCTCTCTGGCAGGAACTCTGATGCAC...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTAGTGGCCGGTCAGGTTaGCCTGGCGAGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPSGRSG*PGELPP
Trigger: TGGAGGCAGCTCGCCAGGCCAACCTGACCGGCCACT...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTCCGACCCACAGGAAGTaGCCGGTCAGGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPPTHRK*PVRLAW
Trigger: CCAGGCCAACCTGACCGGCCACTTCCTGTGGGTCGG...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATCCGTGTGGTTGGGCGTaGGCCTCATGTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LSLRARGILPRPECLHPDPCGWA*ASCPQD
Trigger: GTCCTGGGGACATGAGGCCCACGCCCAACCACACGG...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTATCCTCGCCCTTGGGTaGGGCTGCCACCGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPILALG*GCHRGG
Trigger: ACCTCCACGGTGGCAGCCCCACCCAAGGGCGAGGAT...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGGCTCGGGGTCGGCGTTaGCGCGGTCCAGCGCGTACA +
Preference number: 4 (lower is better)
Translates to: ESRLREARTLCQKLHTGEARGRR*RGPART
Trigger: TGTACGCGCTGGACCGCGTCAACGCCGACCCCGAGC...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCGCAGGGCAGAGTAGCTaGGGGTCGTGCCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSAGQSS*GSCPGP
Trigger: TGGGCCTGGGCACGACCCTCAGCTACTCTGCCCTGC...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCCCGTGGAGGTGGCCTTaGGGCTCCGCTTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: RGILPRPECLHPDAQPQVPWRWP*GSAFAS
Trigger: AGAAGCGAAAGCGGAGCCTCAAGGCCACCTCCACGG...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCCCCTCACCACGGCCATaGCTCTCTGTCACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: RGILPRPECLHPDAQPQVPSPRP*LSVTAP
Trigger: GGGAGCAGTGACAGAGAGTCATGGCCGTGGTGAGGG...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGTGCGTTCCTCGCCTGTaGATTTGCGGGTGGAATCGT +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRCVPRL*ICGWNR
Trigger: ACGATTCCACCCGCAAATGCACAGGCGAGGAACGCA...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATGAAGCTGGGCACAGGCCTGTGTaGCCAGGGCAGAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: AVSHHGKRVWSVVRKHEAGHRPV*PGQSAW
Trigger: CCAGGCGCTCTGCCCTGGGCACACAGGCCTGTGCCC...AGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCGGGCACAGGCCTGTGTaGCCAGGGCAGAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCGHRPV*PGQSAW
Trigger: CCAGGCGCTCTGCCCTGGGCACACAGGCCTGTGCCC...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGTGCCCACTGGCCCACTaGCTGGTACCCGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRCPLAH*LVPATA
Trigger: AGCAGTGGCGGGTACCAGGCAGTGGGCCAGTGGGCA...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCGCCCGCAGGGCAGGCTaGACAGAGACGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSARRAG*TETRAP
Trigger: AGGTGCCCTCGTCTCTGTGCAGCCTGCCCTGCGGGC...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATCCGGTCAGGTTGGCCTaGCGAGCTGCCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYPVRLA*RAASRT
Trigger: GGTCCTGGAGGCAGCTCGCCAGGCCAACCTGACCGG...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGGGTCAAATCCGTCGATaGAGGCCCTTTTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRGQIRR*RPFWAG
Trigger: TCCTGCCCAAAAGGGCCTCCATCGACGGATTTGACC...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGACCAGGGCAGAGCGCCTaGTGCATGCTGTGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGPGQSA*CMLWRA
Trigger: CGCCCTCCACAGCATGCACCAGGCGCTCTGCCCTGG...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAGGGTCTCTGCCCACTaGCCCACTGCCTGGTACCCG +
Preference number: 4 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRRVSAH*PTAWYP
Trigger: CGGGTACCAGGCAGTGGGCCAGTGGGCAGAGACCCT...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGGCGGCAGCCCGTGTaGTTGGGCGTGGGCCTCATG +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMGRQPV*LGVGLM
Trigger: CATGAGGCCCACGCCCAACCACACGGGCTGCCGCCC...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGGGCGCACCACAGGTGTaGGGCGGCAGCCCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: ESRLREARTLCQKLHTGEGAPQV*GGSPCG
Trigger: ACCACACGGGCTGCCGCCCCACACCTGTGGTGCGCC...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCCAGGCTCAAGATGGGTaGGGTCTTGGCTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RGILPRPECLHPDAQPQVQAQDG*GLGSPA
Trigger: AGCTGGGGAGCCAAGACCTCACCCATCTTGAGCCTG...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTTTTTGGGCAGGATGGTaGTGGCCCCAACGGCCACGT +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPFWAGW*WPQRPR
Trigger: ACGTGGCCGTTGGGGCCATCACCATCCTGCCCAAAA...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATGTTGGCCTGGCGAGCTaGCTCCAGGACCCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYVGLAS*LQDPPD
Trigger: ATCAGGCGGGTCCTGGAGGCAGCTCGCCAGGCCAAC...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTTGGAGTCCCGGCCGATaGGTTCCTCGCCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPWSPGR*VPRLCI
Trigger: AATGCACAGGCGAGGAACGCATCGGCCGGGACTCCA...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATGAAGCTGGGCAGAGCGCCTGGTaGATGCTGTGGAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: AVSHHGKRVWSVVRKHEAGQSAW*MLWRAW
Trigger: CCACGCCCTCCACAGCATGCACCAGGCGCTCTGCCC...AGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATCGCCACTGCTGGCACTaGCATTGGTCGCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: LSLRARGILPRPECLHPDRHCWH*HWSPGT
Trigger: AGTACCAGGCGACCAATGGCAGTGCCAGCAGTGGCG...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGGGGTCGCCAGACCACTaGAGGGCCTCCACATCCAGT +
Preference number: 4 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRGSPDH*RASTSS
Trigger: ACTGGATGTGGAGGCCCTGCAGTGGTCTGGCGACCC...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCTCACAGGCCTCGCAGTaGCAACAGCAGGGGACGCCC +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSSQASQ*QQQGTP
Trigger: GGGCGTCCCCTGCTGTTGGCACTGCGAGGCCTGTGA...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGGGCCCAGGAAGAGCCTaGGGGCGGCACAGACCGCGG +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEGPGRA*GRHRPR
Trigger: CCGCGGTCTGTGCCGCCCGCAGGCTCTTCCTGGGCC...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGACCGGGCCCCCAGCCATaGTATCATCCCCACCACCTG +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGPGPQP*YHPHHL
Trigger: CAGGTGGTGGGGATGATAGCATGGCTGGGGGCCCGG...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATCCGGGCCCCCAGCCATaGTATCATCCCCACCACCTG +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYPGPQP*YHPHHL
Trigger: CAGGTGGTGGGGATGATAGCATGGCTGGGGGCCCGG...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGACACTCCCGCGCCCACTaGAGGCCCTTCCCATGCTCA +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGHSRAH*RPFPCS
Trigger: TGAGCATGGGAAGGGCCTGCAGTGGGCGCGGGAGTG...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGGGACAAAACCTTCGGTaGAGGTCAGCTCTCACTCGA +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRGQNLR*RSALTR
Trigger: TCGAGTGAGAGCTGACCTGCACCGAAGGTTTTGTCC...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGAGGAGTGAGTTGAGTTaGCCAAGTGCATGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRRSELS*PSACSW
Trigger: CCAGCTGCATGCACTTGGGCAACTCAACTCACTCCT...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS-3UTR CCA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCCTGGTAGGAGTCGGGTaGCACCACCCGGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: RGILPRPECLHPDAQPQVLVGVG*HHPGEE
Trigger: TTCTTCTCCCGGGTGGTGCCACCCGACTCCTACCAG...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATCCGACCCACAGGAAGTaGCCGGTCAGGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYPTHRK*PVRLAW
Trigger: CCAGGCCAACCTGACCGGCCACTTCCTGTGGGTCGG...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGGTGGAATCGTCTGACTaGGTACCTGAGCTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRVESSD*VPELVS
Trigger: ACTGACCAGCTCAGGTACCCAGTCAGACGATTCCAC...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGACGAGGGCACCTCGTaGGGGTCGCCAGACCACTGC +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMDEGTS*GSPDHC
Trigger: GCAGTGGTCTGGCGACCCCCACGAGGTGCCCTCGTC...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGACCGTGTGGTTGGGCGTaGGCCTCATGTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGPCGWA*ASCPQD
Trigger: GTCCTGGGGACATGAGGCCCACGCCCAACCACACGG...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGGTCAATCACGCTGTGTaGGGGCCGGGCCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: ESRLREARTLCQKLHTGEVNHAV*GPGPQP
Trigger: TGGCTGGGGGCCCGGCCCCCACACAGCGTGATTGAC...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCATCCTCGCCCTTGGGTaGGGCTGCCACCGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSILALG*GCHRGG
Trigger: ACCTCCACGGTGGCAGCCCCACCCAAGGGCGAGGAT...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCCACCGACGCGGAGCATaGTCTTGGCAAACTCCCTGC +
Preference number: 4 (lower is better)
Translates to: RGILPRPECLHPDAQPQVHRRGA*SWQTPC
Trigger: GCAGGGAGTTTGCCAAGACCATGCTCCGCGTCGGTG...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGCATGGGAAGCGAGTCTaGTCTGTGGTGAGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRHGKRV*SVVRKH
Trigger: ATGCTTCCTCACCACAGACCAGACTCGCTTCCCATG...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR CAA 72 bp TTCTCAAGGCCAGCCCCACCGACGCGGAGCATGGTCTaGGCAAACTCCCTGCCACTGACTGTTCACCGTGGA +
Preference number: 4 (lower is better)
Translates to: FSRPAPPTRSMV*ANSLPLTVHRG
Trigger: TCCACGGTGAACAGTCAGTGGCAGGGAGTTTGCCAAGACCATGCTCCGCGTCGGTGGGGCTGGCCTTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR CAA 72 bp GTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTCTaGCTGAGACAGCTCCTCCTCCACTCCAACCCCATG +
Preference number: 4 (lower is better)
Translates to: VPPSRCTAPGLL*LRQLLLHSNPM
Trigger: CATGGGGTTGGAGTGGAGGAGGAGCTGTCTCAGCAAGAGGAGACCTGGGGCTGTGCATCTGGATGGAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGCACGTTGGCGACCATaGTGGAGACGGAGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMARWRP*WRRSWP
Trigger: CGGCCAGCTCCGTCTCCATCATGGTCGCCAACGTGC...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATGAAGCTGGCTCCCCAGCTGTCTaGGCCGACCCACAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: AVSHHGKRVWSVVRKHEAGSPAV*ADPQEV
Trigger: CACTTCCTGTGGGTCGGCTCAGACAGCTGGGGAGCC...AGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGCAGGCTCAAGATGGGTaGGGTCTTGGCTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRQAQDG*GLGSPA
Trigger: AGCTGGGGAGCCAAGACCTCACCCATCTTGAGCCTG...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATCCGACATGTCGCACTTaGGCACCCCTCTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYPTCRT*APLWPA
Trigger: AGCAGGCCAGAGGGGTGCTCAAGTGCGACATGTCGG...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCGCACGCCACGGGCCTTaGTGGCGTACACTGTGCACG +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCARHGP*WRTLCT
Trigger: CGTGCACAGTGTACGCCATCAAGGCCCGTGGCGTGC...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGCACGCCACGGGCCTTaGTGGCGTACACTGTGCACG +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMARHGP*WRTLCT
Trigger: CGTGCACAGTGTACGCCATCAAGGCCCGTGGCGTGC...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATCCGTGGAGGTGGCCTTaGGGCTCCGCTTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYPWRWP*GSAFAS
Trigger: AGAAGCGAAAGCGGAGCCTCAAGGCCACCTCCACGG...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGAGCCGGTGCACGCCCTaGTCCTTCTTCAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMSRCTP*SFFSCP
Trigger: CGGGCAGCTGAAGAAGGAGCAGGGCGTGCACCGGCT...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGGTTGGCCTGGCGAGCTaGCTCCAGGACCCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: ESRLREARTLCQKLHTGEVGLAS*LQDPPD
Trigger: ATCAGGCGGGTCCTGGAGGCAGCTCGCCAGGCCAAC...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATCATCACAGGGGTTCCTaGGCTGCCATTGAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: LSLRARGILPRPECLHPDHHRGS*AAIEAD
Trigger: GTCCGCTTCAATGGCAGCGCAGGAACCCCTGTGATG...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGACCTGGTACCCGCCACTaGTGGCACTGCCATTGGTCG +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGPGTRH*WHCHWS
Trigger: CGACCAATGGCAGTGCCAGCAGTGGCGGGTACCAGG...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGTGCCCACTGGCCCACTaGCTGGTACCCGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMCPLAH*LVPATA
Trigger: AGCAGTGGCGGGTACCAGGCAGTGGGCCAGTGGGCA...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAGTCCCGTTCCCACCTaGCCTGCTACTTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRSPVPT*PATCGP
Trigger: AGGCCCACAAGTAGCAGGGCAGGTGGGAACGGGACT...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGGAAGCCAGGACTCTATaGCAGAAACTTCACACTGGG +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCREARTL*QKLHTG
Trigger: CCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTC...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTACATGGGCCTCGCGGTaGATCAGAGTTCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPTWASR*IRVPAR
Trigger: TCTGGCAGGAACTCTGATGCACCGCGAGGCCCATGT...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGAGGCAGCCACTCGAGCTaGGGTGCTCACTGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGGSHSS*GAHCAN
Trigger: GTTGGCACAGTGAGCACCGCAGCTCGAGTGGCTGCC...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS-3UTR CCA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGGGGACACCGGGGTCCTaGGGAGAAGGCGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWGTPGS*GEGARG
Trigger: GCCCCGAGCGCCTTCTCCCCAGGACCCCGGTGTCCC...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000231188.9
CDS-3UTR CCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCCGACCCACAGGAAGTaGCCGGTCAGGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCPTHRK*PVRLAW
Trigger: CCAGGCCAACCTGACCGGCCACTTCCTGTGGGTCGG...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATAGATGGGTGAGGTCTTaGCTCCCCAGCTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LSLRARGILPRPECLHPDRWVRS*LPSCLS
Trigger: GCTCAGACAGCTGGGGAGCCAAGACCTCACCCATCT...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACCCAGGGCAGAGCGCCTaGTGCATGCTGTGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNPGQSA*CMLWRA
Trigger: CGCCCTCCACAGCATGCACCAGGCGCTCTGCCCTGG...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGAGGTACCCGCCACTGCTaGCACTGCCATTGGTCGCCT +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGGTRHC*HCHWSP
Trigger: AGGCGACCAATGGCAGTGCCAGCAGTGGCGGGTACC...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGCACTGGCCCACTGCCTaGTACCCGCCACTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMHWPTA*YPPLLA
Trigger: TGCCAGCAGTGGCGGGTACCAGGCAGTGGGCCAGTG...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACGACGAGGGCACCTCGTaGGGGTCGCCAGACCACTGC +
Preference number: 4 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNDEGTS*GSPDHC
Trigger: GCAGTGGTCTGGCGACCCCCACGAGGTGCCCTCGTC...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGGGGCGGCAGCCCGTGTaGTTGGGCGTGGGCCTCATG +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEGRQPV*LGVGLM
Trigger: CATGAGGCCCACGCCCAACCACACGGGCTGCCGCCC...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGGGCGCACCACAGGTGTaGGGCGGCAGCCCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEGAPQV*GGSPCG
Trigger: ACCACACGGGCTGCCGCCCCACACCTGTGGTGCGCC...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCCTGCCCTGCTACTTGTaGGCCTCTGCATCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPILPCYL*ASASSP
Trigger: GGGCGAGGATGCAGAGGCCCACAAGTAGCAGGGCAG...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCCTGCCCTGCTACTTGTaGGCCTCTGCATCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSLPCYL*ASASSP
Trigger: GGGCGAGGATGCAGAGGCCCACAAGTAGCAGGGCAG...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCGCATTGGGAATCTCATaGGGGCGCACCCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RGILPRPECLHPDAQPQVALGIS*GRTPVP
Trigger: AGGAACTGGGGTGCGCCCCCATGAGATTCCCAATGC...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTATTGCTTGGGAGGATaGAACCCCGCGGGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: RGILPRPECLHPDAQPQVYCLGG*NPAGSF
Trigger: GAACGACCCCGCGGGGTTCCATCCTCCCAAGCAATA...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS-3UTR TCA 90 bp ACCCATCCCCAACCCGAACACAACACAAATGCACCCCTGCTCCTTGTTCTCACAGGCTCCCCAGCTGTCTaGGCCGACCCACAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: THPQPEHNTNAPLLLVLTGSPAV*ADPQEV
Trigger: CACTTCCTGTGGGTCGGCTCAGACAGCTGGGGAGCC...TGTGAGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCGGGTTGGGGATGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCTTTTGGGCAGGATGGTaGTGGCCCCAACGGCCACGT +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSFWAGW*WPQRPR
Trigger: ACGTGGCCGTTGGGGCCATCACCATCCTGCCCAAAA...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCGACAGGCCTCGCATGTaGACTCGTCCACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSDRPRM*TRPPGS
Trigger: GCTTCCAGGTGGACGAGTTCACATGCGAGGCCTGTC...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACCCATCCCCAACCCGAACACAACACAAATGCACCCCTGCTCCTTGTTCTCACAGCACGCCACGGGCCTTaGTGGCGTACACTGTGCACG +
Preference number: 4 (lower is better)
Translates to: THPQPEHNTNAPLLLVLTARHGP*WRTLCT
Trigger: CGTGCACAGTGTACGCCATCAAGGCCCGTGGCGTGC...TGTGAGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCGGGTTGGGGATGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATCAAACTCCCTGCCACTaGCTGTTCACCGTGGACCCG +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYQTPCH*LFTVDP
Trigger: CGGGTCCACGGTGAACAGTCAGTGGCAGGGAGTTTG...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGCAGGTCTCCTCTTGCTaGGACAGCTCCTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRQVSSC*DSSSST
Trigger: AGTGGAGGAGGAGCTGTCTCAGCAAGAGGAGACCTG...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGCCCTCACCACGGCCATaGCTCTCTGTCACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: ESRLREARTLCQKLHTGEPSPRP*LSVTAP
Trigger: GGGAGCAGTGACAGAGAGTCATGGCCGTGGTGAGGG...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATAGCGGGAGGATTGCTTaGGCCCAGGTCGAAACTTCA +
Preference number: 4 (lower is better)
Translates to: LSLRARGILPRPECLHPDSGRIA*AQVETS
Trigger: TGAAGTTTCGACCTGGGCTCAAGCAATCCTCCCGCT...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCCACTTTCGCCATAGTTaGCCTCGGAGGCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSHFRHS*PRRPAW
Trigger: CCACGCTGGCCTCCGAGGGCAACTATGGCGAAAGTG...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATCCTCGCCTGTGCATTTaGGGGTGGAATCGTCTGACT +
Preference number: 4 (lower is better)
Translates to: LSLRARGILPRPECLHPDPRLCI*GWNRLT
Trigger: AGTCAGACGATTCCACCCGCAAATGCACAGGCGAGG...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTCCTCGCCTGTGCATTTaGGGGTGGAATCGTCTGACT +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPPRLCI*GWNRLT
Trigger: AGTCAGACGATTCCACCCGCAAATGCACAGGCGAGG...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCAGAGCGCCTGGTGCATaGTGTGGAGGGCGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCRAPGA*CGGRGQ
Trigger: TTGCCCACGCCCTCCACAGCATGCACCAGGCGCTCT...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGCATCACAGGGGTTCCTaGGCTGCCATTGAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRHHRGS*AAIEAD
Trigger: GTCCGCTTCAATGGCAGCGCAGGAACCCCTGTGATG...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGGGGTCGCCAGACCACTaGAGGGCCTCCACATCCAGT +
Preference number: 4 (lower is better)
Translates to: ESRLREARTLCQKLHTGEGSPDH*RASTSS
Trigger: ACTGGATGTGGAGGCCCTGCAGTGGTCTGGCGACCC...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCCTACTTGTGGGCCTCTaGATCCTCGCCCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPILLVGL*ILALGW
Trigger: CCACCCAAGGGCGAGGATGCAGAGGCCCACAAGTAG...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCGGGTCTCTCCCTCCGTaGCAGAGGAATCCTACCCAG +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSGSLPP*QRNPTQ
Trigger: CTGGGTAGGATTCCTCTGGCACGGAGGGAGAGACCC...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCCCACTCGAGCTGCGGTaGTCACTGTGCCAACGCTCT +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSPLELR*SLCQRS
Trigger: AGAGCGTTGGCACAGTGAGCACCGCAGCTCGAGTGG...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS-3UTR GCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCCCCACTCCCGCCTATTaGTTGGGAGGATGGAACCCC +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSPTPAY*LGGWNP
Trigger: GGGGTTCCATCCTCCCAAGCAATAGGCGGGAGTGGG...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGACTGGTAGGAGTCGGGTaGCACCACCCGGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGLVGVG*HHPGEE
Trigger: TTCTTCTCCCGGGTGGTGCCACCCGACTCCTACCAG...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCCATCCCCAACCCGAACACAACACAAATGCACCCCTGCTCCTTGTTCTCACAAGTGGCCGGTCAGGTTaGCCTGGCGAGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: THPQPEHNTNAPLLLVLTSGRSG*PGELPP
Trigger: TGGAGGCAGCTCGCCAGGCCAACCTGACCGGCCACT...TGTGAGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCGGGTTGGGGATGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGCCTCCTGCTCGTAGGTaGAGTCCCGGCCGATGCGTT +
Preference number: 4 (lower is better)
Translates to: ESRLREARTLCQKLHTGEPPARR*SPGRCV
Trigger: AACGCATCGGCCGGGACTCCACCTACGAGCAGGAGG...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGCCTCCTGCTCGTAGGTaGAGTCCCGGCCGATGCGTT +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMPPARR*SPGRCV
Trigger: AACGCATCGGCCGGGACTCCACCTACGAGCAGGAGG...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGGCATCCGCCCATCAGTaGGTTCCATCGCCGGGCACA +
Preference number: 4 (lower is better)
Translates to: ESRLREARTLCQKLHTGEASAHQ*VPSPGT
Trigger: TGTGCCCGGCGATGGAACCCACTGATGGGCGGATGC...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGTACCCGCCACTGCTaGCACTGCCATTGGTCGCCT +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMGTRHC*HCHWSP
Trigger: AGGCGACCAATGGCAGTGCCAGCAGTGGCGGGTACC...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCCGAGGCCCGGACGATaGGCGTGTTGTTGTACCGCA +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCPRPGR*ACCCTA
Trigger: TGCGGTACAACAACACGCCCATCGTCCGGGCCTCGG...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGGCTGTTTCCCACCATaGGAAGCGAGTCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LSLRARGILPRPECLHPDGCFPP*EASLVC
Trigger: ACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCC...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGCCCCATGTTTCATTCTaGGGTCTACACGTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRPHVSF*GLHVLP
Trigger: TGGAAGAACGTGTAGACCCCAGAATGAAACATGGGG...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCCTTCCTCCCCAGGCCTaGCGCTCAGCTTGCAAATGG +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPILPPQA*RSACKW
Trigger: CCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAG...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGCCCGCGGGGTCGTTCTaGCTCCGTATAAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRPAGSF*LRIKSP
Trigger: AGGAGACTTTATACGGAGCCAGAACGACCCCGCGGG...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS-3UTR CCA 90 bp GCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATGAAGCTCTCCCGCCTATTGCTTaGGAGGATGGAACCCCGCGG +
Preference number: 4 (lower is better)
Translates to: AVSHHGKRVWSVVRKHEALPPIA*EDGTPR
Trigger: CCGCGGGGTTCCATCCTCCCAAGCAATAGGCGGGAG...AGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS-3UTR TCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGGCACGTTGGCGACCATaGTGGAGACGGAGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEARWRP*WRRSWP
Trigger: CGGCCAGCTCCGTCTCCATCATGGTCGCCAACGTGC...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGCCTCTCGGGAGATCTaGACGAAGGCCTCAACCCCA +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMASREI*TKASTP
Trigger: TGGGGTTGAGGCCTTCGTTCAGATCTCCCGAGAGGC...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCCCTCCAGGACCCGCCTaGTGTCATCCTCATTGGCAA +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSPPGPA*CHPHWQ
Trigger: TTGCCAATGAGGATGACATCAGGCGGGTCCTGGAGG...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCTTTTGGGCAGGATGGTaGTGGCCCCAACGGCCACGT +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCFWAGW*WPQRPR
Trigger: ACGTGGCCGTTGGGGCCATCACCATCCTGCCCAAAA...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCCATCTCCGTTCTCGTTaGACATCACAGGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RGILPRPECLHPDAQPQVHLRSR*TSQGFL
Trigger: CAGGAACCCCTGTGATGTTCAACGAGAACGGAGATG...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGGCAGGGCAGAGTAGCTaGGGGTCGTGCCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWAGQSS*GSCPGP
Trigger: TGGGCCTGGGCACGACCCTCAGCTACTCTGCCCTGC...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCAGCCCAGGCAGCCGATaGGAGACAGATCCGACATGT +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSSPGSR*ETDPTC
Trigger: ACATGTCGGATCTGTCTCTCATCGGCTGCCTGGGCT...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATGAAGCTCAAACTCCCTGCCACTaGCTGTTCACCGTGGACCCG +
Preference number: 4 (lower is better)
Translates to: AVSHHGKRVWSVVRKHEAQTPCH*LFTVDP
Trigger: CGGGTCCACGGTGAACAGTCAGTGGCAGGGAGTTTG...AGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCGTTATGGGGGTTGACTaGGGGGAGGAAATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSVMGVD*GEEISR
Trigger: GCGGGAGATTTCCTCCCCTCAGTCAACCCCCATAAC...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGGAACATGGCAGAGTGTaGAAGTCGTCTGCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVREHGRV*KSSAGS
Trigger: GCTTCCCGCAGACGACTTTCACACTCTGCCATGTTC...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGCCGCGGATCAGCGCCTaGACGAAGCTCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLPRISA*TKLSAC
Trigger: GCAGGCGCTGAGCTTCGTGCAGGCGCTGATCCGCGG...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGGGGCAGAGCGCCTGGTaGATGCTGTGGAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLGQSAW*MLWRAW
Trigger: CCACGCCCTCCACAGCATGCACCAGGCGCTCTGCCC...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGCGCCACTGCTGGCACTaGCATTGGTCGCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMRHCWH*HWSPGT
Trigger: AGTACCAGGCGACCAATGGCAGTGCCAGCAGTGGCG...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACCCTGGTACCCGCCACTaGTGGCACTGCCATTGGTCG +
Preference number: 4 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNPGTRH*WHCHWS
Trigger: CGACCAATGGCAGTGCCAGCAGTGGCGGGTACCAGG...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACCAGTCTGAGGGTCTCTaGCCACTGGCCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNQSEGL*PLAHCL
Trigger: CAGGCAGTGGGCCAGTGGGCAGAGACCCTCAGACTG...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGGCCCGCAGGGCAGGCTaGACAGAGACGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWARRAG*TETRAP
Trigger: AGGTGCCCTCGTCTCTGTGCAGCCTGCCCTGCGGGC...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCGAGGAGCGGCGGGGCTaGCCAGGGGGAGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPEERRG*PGGGPA
Trigger: AGCTGGTCCTCCCCCTGGGCAGCCCCGCCGCTCCTC...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGGTGCCTCCATCCAGATaGACAGCCCCAGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ESRLREARTLCQKLHTGEVPPSR*TAPGLL
Trigger: GAGGAGACCTGGGGCTGTGCATCTGGATGGAGGCAC...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCCTACCCAGGCCTGAGTaGCTCCATCCAGATGCACAG +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSLPRPE*LHPDAQ
Trigger: CTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAG...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGCACTCCCGCGCCCACTaGAGGCCCTTCCCATGCTCA +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEHSRAH*RPFPCS
Trigger: TGAGCATGGGAAGGGCCTGCAGTGGGCGCGGGAGTG...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTAAATGTGCGTGCATCTaGAGCCCAAGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPKCACI*SPSLFL
Trigger: GAGGAAGAGGCTTGGGCTGCAGATGCACGCACATTT...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGAGTGAAAAACAAATGTaGGTGCATCTGCAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRSEKQM*VHLQPK
Trigger: CTTGGGCTGCAGATGCACGCACATTTGTTTTTCACT...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATGTGCATCAGAGTTCCTaGCAGAGAGGCCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYVHQSS*QRGPQA
Trigger: TGCCTGTGGGCCTCTCTGGCAGGAACTCTGATGCAC...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTGGACAAAACCTTCGGTaGAGGTCAGCTCTCACTCGA +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPGQNLR*RSALTR
Trigger: TCGAGTGAGAGCTGACCTGCACCGAAGGTTTTGTCC...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTCTGTGCATTTGCGGGTaGAATCGTCTGACTGGGTAC +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPLCICG*NRLTGY
Trigger: GTACCCAGTCAGACGATTCCACCCGCAAATGCACAG...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGCACTGGCCCACTGCCTaGTACCCGCCACTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEHWPTA*YPPLLA
Trigger: TGCCAGCAGTGGCGGGTACCAGGCAGTGGGCCAGTG...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGAGGGTCTCTGCCCACTaGCCCACTGCCTGGTACCCG +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQERVSAH*PTAWYP
Trigger: CGGGTACCAGGCAGTGGGCCAGTGGGCAGAGACCCT...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCGTGAACTCGTCCACCTaGAAGCGGTACCCGTCACAG +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSVNSST*KRYPSQ
Trigger: CTGTGACGGGTACCGCTTCCAGGTGGACGAGTTCAC...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGGTCAATCACGCTGTGTaGGGGCCGGGCCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLVNHAV*GPGPQP
Trigger: TGGCTGGGGGCCCGGCCCCCACACAGCGTGATTGAC...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGATCTTTTCAGCTGACTaGGCAGTGCCAAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRIFSAD*AVPKKM
Trigger: CATCTTCTTTGGCACTGCCCAGTCAGCTGAAAAGAT...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGCACCGACGCGGAGCATaGTCTTGGCAAACTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ESRLREARTLCQKLHTGEHRRGA*SWQTPC
Trigger: GCAGGGAGTTTGCCAAGACCATGCTCCGCGTCGGTG...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATATGAAGCTCACATGCTaGAATCGGGGTAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LSLRARGILPRPECLHPDMKLTC*NRGRAG
Trigger: CCCAGCTCTACCCCGATTCCAGCATGTGAGCTTCAT...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTCATGGGAAGCGAGTCTaGTCTGTGGTGAGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPHGKRV*SVVRKH
Trigger: ATGCTTCCTCACCACAGACCAGACTCGCTTCCCATG...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATCTAGAACCTTCTCGGTaGCTGTTTCCCACCATGGGA +
Preference number: 4 (lower is better)
Translates to: LSLRARGILPRPECLHPDLEPSR*LFPTMG
Trigger: TCCCATGGTGGGAAACAGCCACCGAGAAGGTTCTAG...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCGCATTGGGAATCTCATaGGGGCGCACCCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIALGIS*GRTPVP
Trigger: AGGAACTGGGGTGCGCCCCCATGAGATTCCCAATGC...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCAGCCACAGGAGTACATaGGCCTCGCGGTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPISHRST*ASRCIR
Trigger: TCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCT...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTCTGGATGGAAGAGGATaGCGTAGGTTTTGGGTACGT +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPLDGRG*RRFWVR
Trigger: ACGTACCCAAAACCTACGTCATCCTCTTCCATCCAG...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTGTGGTGAGGAAGCATaGAGCTCACATGCTGGAATC +
Preference number: 4 (lower is better)
Translates to: RGILPRPECLHPDAQPQVCGEEA*SSHAGI
Trigger: GATTCCAGCATGTGAGCTTCATGCTTCCTCACCACA...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGGTTATGGGGGTTGACTaGGGGGAGGAAATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ESRLREARTLCQKLHTGEVMGVD*GEEISR
Trigger: GCGGGAGATTTCCTCCCCTCAGTCAACCCCCATAAC...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCCCAGGTTATGGGGGTTaGCTGAGGGGAGGAAATCTC +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSPGYGG*LRGGNL
Trigger: GAGATTTCCTCCCCTCAGTCAACCCCCATAACCTGG...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGGTCTCCTCTTGCTaGGACAGCTCCTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCQVSSC*DSSSST
Trigger: AGTGGAGGAGGAGCTGTCTCAGCAAGAGGAGACCTG...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCACGCCCCATTACCCATaGGAGAGCTGCACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCTPHYP*ESCTGE
Trigger: CTCTCCTGTGCAGCTCTCTCATGGGTAATGGGGCGT...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATGAACATGGCAGAGTGTaGAAGTCGTCTGCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYEHGRV*KSSAGS
Trigger: GCTTCCCGCAGACGACTTTCACACTCTGCCATGTTC...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCAACTTCAGTGAGCTATaGTCGTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: RGILPRPECLHPDAQPQVNFSEL*SCHCTP
Trigger: TGGAGTGCAGTGGCACGATCATAGCTCACTGAAGTT...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTAACTTCAGTGAGCTATaGTCGTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPNFSEL*SCHCTP
Trigger: TGGAGTGCAGTGGCACGATCATAGCTCACTGAAGTT...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGACCTCGCCTGTGCATTTaGGGGTGGAATCGTCTGACT +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGPRLCI*GWNRLT
Trigger: AGTCAGACGATTCCACCCGCAAATGCACAGGCGAGG...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCTGCGTTCCTCGCCTGTaGATTTGCGGGTGGAATCGT +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPICVPRL*ICGWNR
Trigger: ACGATTCCACCCGCAAATGCACAGGCGAGGAACGCA...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTACAGCTCGAATGTACTaGAGAAGCATCCGCCCATCA +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPTARMY*RSIRPS
Trigger: TGATGGGCGGATGCTTCTGCAGTACATTCGAGCTGT...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTGAGGAGCGGCGGGGCTaGCCAGGGGGAGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTEERRG*PGGGPA
Trigger: AGCTGGTCCTCCCCCTGGGCAGCCCCGCCGCTCCTC...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTCGCTTCTGCACATTCTaGTCTGGATGGAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPRFCTF*SGWKRM
Trigger: CATCCTCTTCCATCCAGAGCAGAATGTGCAGAAGCG...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCCATCCCCAACCCGAACACAACACAAATGCACCCCTGCTCCTTGTTCTCACACTACTTGTGGGCCTCTaGATCCTCGCCCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: THPQPEHNTNAPLLLVLTLLVGL*ILALGW
Trigger: CCACCCAAGGGCGAGGATGCAGAGGCCCACAAGTAG...TGTGAGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCGGGTTGGGGATGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGCACGTTCTTCCACACTaGCCAATCCCCAGGTTATGG +
Preference number: 4 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRHVLPH*PIPRLW
Trigger: CCATAACCTGGGGATTGGGCAGTGTGGAAGAACGTG...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACGTGCCTCCATCCAGATaGACAGCCCCAGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNVPPSR*TAPGLL
Trigger: GAGGAGACCTGGGGCTGTGCATCTGGATGGAGGCAC...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCCATCCCCAACCCGAACACAACACAAATGCACCCCTGCTCCTTGTTCTCACAGGGTCTCTCCCTCCGTaGCAGAGGAATCCTACCCAG +
Preference number: 4 (lower is better)
Translates to: THPQPEHNTNAPLLLVLTGSLPP*QRNPTQ
Trigger: CTGGGTAGGATTCCTCTGGCACGGAGGGAGAGACCC...TGTGAGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCGGGTTGGGGATGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACAGGTGTGAGCCACCATaGCTGGCCAAGGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNRCEPP*LAKVGV
Trigger: CACCCCAACCTTGGCCAGGCATGGTGGCTCACACCT...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCGTGCATCAGAGTTCCTaGCAGAGAGGCCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCVHQSS*QRGPQA
Trigger: TGCCTGTGGGCCTCTCTGGCAGGAACTCTGATGCAC...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATACCCAGAATGGTGCATaGTGTGGAGATACCCTGCAA +
Preference number: 4 (lower is better)
Translates to: LSLRARGILPRPECLHPDTQNGA*CGDTLQ
Trigger: TTGCAGGGTATCTCCACAGCATGCACCATTCTGGGT...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACCCTCCAGGCTCAAGATaGGTGAGGTCTTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNPPGSR*VRSWLP
Trigger: GGGGAGCCAAGACCTCACCCATCTTGAGCCTGGAGG...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCGGAGGGCGTGGGCAATaGCGTACACCGCATCAATCA +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCGGRGQ*RTPHQS
Trigger: TGATTGATGCGGTGTACGCCATTGCCCACGCCCTCC...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGGCATCCGCCCATCAGTaGGTTCCATCGCCGGGCACA +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEASAHQ*VPSPGT
Trigger: TGTGCCCGGCGATGGAACCCACTGATGGGCGGATGC...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGTTGGTCGCCTGGTACTaGAAGATGTCGTACCGCCCG +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMLVAWY*KMSYRP
Trigger: CGGGCGGTACGACATCTTCCAGTACCAGGCGACCAA...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGCACTGGCCCACTGCCTaGTACCCGCCACTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLHWPTA*YPPLLA
Trigger: TGCCAGCAGTGGCGGGTACCAGGCAGTGGGCCAGTG...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCGGGCGGCAGCCCGTGTaGTTGGGCGTGGGCCTCATG +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPGRQPV*LGVGLM
Trigger: CATGAGGCCCACGCCCAACCACACGGGCTGCCGCCC...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCACTGACTGTTCACCGTaGACCCGGGCTCTATACAGC +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPITDCSP*TRALYS
Trigger: GCTGTATAGAGCCCGGGTCCACGGTGAACAGTCAGT...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCGCATTGGGAATCTCATaGGGGCGCACCCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCALGIS*GRTPVP
Trigger: AGGAACTGGGGTGCGCCCCCATGAGATTCCCAATGC...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCGAAAGCCCATGGCATTaGGAATCTCATGGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIESPWH*ESHGGA
Trigger: TGCGCCCCCATGAGATTCCCAATGCCATGGGCTTTC...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGAGCCACAGGAGTACATaGGCCTCGCGGTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMSHRST*ASRCIR
Trigger: TCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCT...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGTTCCTGCGCTGCCATTaGAGCGGACAGCTCGAATGT +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMFLRCH*SGQLEC
Trigger: ACATTCGAGCTGTCCGCTTCAATGGCAGCGCAGGAA...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATGAAGCTTTCCTGCGCTGCCATTaGAGCGGACAGCTCGAATGT +
Preference number: 4 (lower is better)
Translates to: AVSHHGKRVWSVVRKHEAFLRCH*SGQLEC
Trigger: ACATTCGAGCTGTCCGCTTCAATGGCAGCGCAGGAA...AGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGGACAGGCCTCGCATGTaGACTCGTCCACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEDRPRM*TRPPGS
Trigger: GCTTCCAGGTGGACGAGTTCACATGCGAGGCCTGTC...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCCAGGTTATGGGGGTTaGCTGAGGGGAGGAAATCTC +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCPGYGG*LRGGNL
Trigger: GAGATTTCCTCCCCTCAGTCAACCCCCATAACCTGG...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACCAGGTCTCCTCTTGCTaGGACAGCTCCTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNQVSSC*DSSSST
Trigger: AGTGGAGGAGGAGCTGTCTCAGCAAGAGGAGACCTG...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCTTTCCATACCCGTCCTaGGCCATCCACTTGGGATTC +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIFPYPS*AIHLGF
Trigger: GAATCCCAAGTGGATGGCTCAGGACGGGTATGGAAA...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACACGCCCCATTACCCATaGGAGAGCTGCACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNTPHYP*ESCTGE
Trigger: CTCTCCTGTGCAGCTCTCTCATGGGTAATGGGGCGT...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGAGATCAGAGCTCACTaGTCTCAGAGTTCATACAGG +
Preference number: 4 (lower is better)
Translates to: LSLRARGILPRPECLHPDEIRAH*SQSSYR
Trigger: CCTGTATGAACTCTGAGATCAGTGAGCTCTGATCTC...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTGAGATCAGAGCTCACTaGTCTCAGAGTTCATACAGG +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPEIRAH*SQSSYR
Trigger: CCTGTATGAACTCTGAGATCAGTGAGCTCTGATCTC...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATAGAGGCCCACAGGCATaGACATGGCAGAGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYRGPQA*TWQSVK
Trigger: TTTCACACTCTGCCATGTTCATGCCTGTGGGCCTCT...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATGAAGCTAGCGGGAGGATTGCTTaGGCCCAGGTCGAAACTTCA +
Preference number: 4 (lower is better)
Translates to: AVSHHGKRVWSVVRKHEASGRIA*AQVETS
Trigger: TGAAGTTTCGACCTGGGCTCAAGCAATCCTCCCGCT...AGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGTGGAGTCCCGGCCGATaGGTTCCTCGCCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEWSPGR*VPRLCI
Trigger: AATGCACAGGCGAGGAACGCATCGGCCGGGACTCCA...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCGGGCAGAGCGCCTGGTaGATGCTGTGGAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPGQSAW*MLWRAW
Trigger: CCACGCCCTCCACAGCATGCACCAGGCGCTCTGCCC...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGCCTGGTACCCGCCACTaGTGGCACTGCCATTGGTCG +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLPGTRH*WHCHWS
Trigger: CGACCAATGGCAGTGCCAGCAGTGGCGGGTACCAGG...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCCTCCGCTTTCGCTTCTaGACATTCTGCTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSLRFRF*TFCSGW
Trigger: CCATCCAGAGCAGAATGTGCAGAAGCGAAAGCGGAG...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCCTCCGCTTTCGCTTCTaGACATTCTGCTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPILRFRF*TFCSGW
Trigger: CCATCCAGAGCAGAATGTGCAGAAGCGAAAGCGGAG...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCCACGTTCTTCCACACTaGCCAATCCCCAGGTTATGG +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIHVLPH*PIPRLW
Trigger: CCATAACCTGGGGATTGGGCAGTGTGGAAGAACGTG...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGACACGTTCTTCCACACTaGCCAATCCCCAGGTTATGG +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGHVLPH*PIPRLW
Trigger: CCATAACCTGGGGATTGGGCAGTGTGGAAGAACGTG...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCCGAACACAACACAAATaGACCCCTGCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: RGILPRPECLHPDAQPQVRTQHK*TPAPCS
Trigger: AGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCG...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCATGACTCTCTGTCACTaGTCCCAACCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIMTLCH*SQPGAP
Trigger: AGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCAT...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAGTGTGAAAGTCGTCTaGGGGAAGCCAGGACTCTAT +
Preference number: 4 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRSVKVV*GKPGLY
Trigger: ATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACT...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCGGACAAAACCTTCGGTaGAGGTCAGCTCTCACTCGA +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIGQNLR*RSALTR
Trigger: TCGAGTGAGAGCTGACCTGCACCGAAGGTTTTGTCC...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGCTTCCACTTCGGCTCTaGGGAGTTAGCTCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQELPLRL*GVSSAG
Trigger: GCCGGCTGAGCTAACTCCCCAGAGCCGAAGTGGAAG...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231188.9
CDS-3UTR CCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGGGTCAAATCCGTCGATaGAGGCCCTTTTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ESRLREARTLCQKLHTGEGQIRR*RPFWAG
Trigger: TCCTGCCCAAAAGGGCCTCCATCGACGGATTTGACC...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATCTGCCATTGGTCGCCTaGTACTGGAAGATGTCGTAC +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYLPLVA*YWKMSY
Trigger: GTACGACATCTTCCAGTACCAGGCGACCAATGGCAG...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGGGTACCCGCCACTGCTaGCACTGCCATTGGTCGCCT +
Preference number: 4 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWGTRHC*HCHWSP
Trigger: AGGCGACCAATGGCAGTGCCAGCAGTGGCGGGTACC...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGCTGCCCTGCTACTTGTaGGCCTCTGCATCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWLPCYL*ASASSP
Trigger: GGGCGAGGATGCAGAGGCCCACAAGTAGCAGGGCAG...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCATGAAGCTCACATGCTaGAATCGGGGTAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSMKLTC*NRGRAG
Trigger: CCCAGCTCTACCCCGATTCCAGCATGTGAGCTTCAT...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGCTGTTTCCCACCATaGGAAGCGAGTCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMGCFPP*EASLVC
Trigger: ACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCC...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGACTAGAACCTTCTCGGTaGCTGTTTCCCACCATGGGA +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGLEPSR*LFPTMG
Trigger: TCCCATGGTGGGAAACAGCCACCGAGAAGGTTCTAG...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATGAAGCTGGGTGGAACCGCCTTTaGCAAGAAAACACGCCCCAT +
Preference number: 4 (lower is better)
Translates to: AVSHHGKRVWSVVRKHEAGWNRL*QENTPH
Trigger: ATGGGGCGTGTTTTCTTGCCAAAGGCGGTTCCACCC...AGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCGGGTGGAACCGCCTTTaGCAAGAAAACACGCCCCAT +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCGWNRL*QENTPH
Trigger: ATGGGGCGTGTTTTCTTGCCAAAGGCGGTTCCACCC...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCGAATGGTGCATGCTGTaGAGATACCCTGCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: RGILPRPECLHPDAQPQVEWCML*RYPASR
Trigger: TCTACTTGCAGGGTATCTCCACAGCATGCACCATTC...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATCCCCTGTACCCAGAATaGTGCATGCTGTGGAGATAC +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYPLYPE*CMLWRY
Trigger: GTATCTCCACAGCATGCACCATTCTGGGTACAGGGG...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCCCCCTGTACCCAGAATaGTGCATGCTGTGGAGATAC +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIPLYPE*CMLWRY
Trigger: GTATCTCCACAGCATGCACCATTCTGGGTACAGGGG...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGGGAAAAGCCCTCTTGTaGAAGTCAGTTATTTGTGTA +
Preference number: 4 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRGKALL*KSVICV
Trigger: TACACAAATAACTGACTTCCACAAGAGGGCTTTTCC...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGGCCTCTCGGGAGATCTaGACGAAGGCCTCAACCCCA +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLASREI*TKASTP
Trigger: TGGGGTTGAGGCCTTCGTTCAGATCTCCCGAGAGGC...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGCAGGCTCAAGATGGGTaGGGTCTTGGCTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLQAQDG*GLGSPA
Trigger: AGCTGGGGAGCCAAGACCTCACCCATCTTGAGCCTG...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCCCAGGGATCGAGTCATaGAGTACTGGTCAAATCCGT +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSPGIES*STGQIR
Trigger: ACGGATTTGACCAGTACTTCATGACTCGATCCCTGG...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGGACAGGCCTCGCATGTaGACTCGTCCACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLDRPRM*TRPPGS
Trigger: GCTTCCAGGTGGACGAGTTCACATGCGAGGCCTGTC...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGAGCCCAGGCAGCCGATaGGAGACAGATCCGACATGT +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQESPGSR*ETDPTC
Trigger: ACATGTCGGATCTGTCTCTCATCGGCTGCCTGGGCT...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATCTGGATGGAAGAGGATaGCGTAGGTTTTGGGTACGT +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYLDGRG*RRFWVR
Trigger: ACGTACCCAAAACCTACGTCATCCTCTTCCATCCAG...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGACTGGATGGAAGAGGATaGCGTAGGTTTTGGGTACGT +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGLDGRG*RRFWVR
Trigger: ACGTACCCAAAACCTACGTCATCCTCTTCCATCCAG...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGAATCCTACCCAGGCCTaGGTGCCTCCATCCAGATGC +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQENPTQA*VPPSRC
Trigger: GCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATT...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCTTTCCATACCCGTCCTaGGCCATCCACTTGGGATTC +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCFPYPS*AIHLGF
Trigger: GAATCCCAAGTGGATGGCTCAGGACGGGTATGGAAA...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGACGCCCCATTACCCATaGGAGAGCTGCACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQETPHYP*ESCTGE
Trigger: CTCTCCTGTGCAGCTCTCTCATGGGTAATGGGGCGT...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGACACTGGGAGAGACATaGGAAAACAGCAAATGCAGG +
Preference number: 4 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRTLGET*ENSKCR
Trigger: CCTGCATTTGCTGTTTTCTCATGTCTCTCCCAGTGT...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCAGAGGCCCACAGGCATaGACATGGCAGAGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCRGPQA*TWQSVK
Trigger: TTTCACACTCTGCCATGTTCATGCCTGTGGGCCTCT...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGAACAGCTCGAATGTACTaGAGAAGCATCCGCCCATCA +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGTARMY*RSIRPS
Trigger: TGATGGGCGGATGCTTCTGCAGTACATTCGAGCTGT...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGAGTCCCGTTCCCACCTaGCCTGCTACTTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWSPVPT*PATCGP
Trigger: AGGCCCACAAGTAGCAGGGCAGGTGGGAACGGGACT...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGGGGTCTCTCCCTCCGTaGCAGAGGAATCCTACCCAG +
Preference number: 4 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWGSLPP*QRNPTQ
Trigger: CTGGGTAGGATTCCTCTGGCACGGAGGGAGAGACCC...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATGAAGCCAGGACTCTATaGCAGAAACTTCACACTGGG +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYEARTL*QKLHTG
Trigger: CCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTC...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCACCCAGAATGGTGCATaGTGTGGAGATACCCTGCAA +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPITQNGA*CGDTLQ
Trigger: TTGCAGGGTATCTCCACAGCATGCACCATTCTGGGT...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGGAACTCTCCTGGCTTTaGTTCCCTGGGAATCTTGAT +
Preference number: 4 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRELSWL*FPGNLD
Trigger: ATCAAGATTCCCAGGGAACCAAAGCCAGGAGAGTTC...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCAGTGGCCGGTCAGGTTaGCCTGGCGAGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPSGRSG*PGELPP
Trigger: TGGAGGCAGCTCGCCAGGCCAACCTGACCGGCCACT...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGCCTCCAGGCTCAAGATaGGTGAGGTCTTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLPPGSR*VRSWLP
Trigger: GGGGAGCCAAGACCTCACCCATCTTGAGCCTGGAGG...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCCCGTGTGGTTGGGCGTaGGCCTCATGTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPPCGWA*ASCPQD
Trigger: GTCCTGGGGACATGAGGCCCACGCCCAACCACACGG...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTCTGCATCCTCGCCCTTaGGTGGGGCTGCCACCGTGG +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTLHPRP*VGLPPW
Trigger: CCACGGTGGCAGCCCCACCCAAGGGCGAGGATGCAG...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGCTAGAACCTTCTCGGTaGCTGTTTCCCACCATGGGA +
Preference number: 4 (lower is better)
Translates to: ESRLREARTLCQKLHTGELEPSR*LFPTMG
Trigger: TCCCATGGTGGGAAACAGCCACCGAGAAGGTTCTAG...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGCCTCCAGGACCCGCCTaGTGTCATCCTCATTGGCAA +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLPPGPA*CHPHWQ
Trigger: TTGCCAATGAGGATGACATCAGGCGGGTCCTGGAGG...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACCCATCCCCAACCCGAACACAACACAAATGCACCCCTGCTCCTTGTTCTCACACATCTCCGTTCTCGTTaGACATCACAGGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: THPQPEHNTNAPLLLVLTHLRSR*TSQGFL
Trigger: CAGGAACCCCTGTGATGTTCAACGAGAACGGAGATG...TGTGAGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCGGGTTGGGGATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCCCGACATGTCGCACTTaGGCACCCCTCTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPPTCRT*APLWPA
Trigger: AGCAGGCCAGAGGGGTGCTCAAGTGCGACATGTCGG...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTTCTTTGGACTTCGGATaGGAGAATAAGTTTAGTCCC +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPSLDFG*ENKFSP
Trigger: GGGACTAAACTTATTCTCTCATCCGAAGTCCAAAGA...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGCCAGGTTATGGGGGTTaGCTGAGGGGAGGAAATCTC +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEPGYGG*LRGGNL
Trigger: GAGATTTCCTCCCCTCAGTCAACCCCCATAACCTGG...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGAATCCTACCCAGGCCTaGGTGCCTCCATCCAGATGC +
Preference number: 4 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWNPTQA*VPPSRC
Trigger: GCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATT...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTTTACACACGTGTATCTaGATTTCTTCAGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPLHTCI*ISSGLG
Trigger: CCCCAAACCTGAAGAAATTCAGATACACGTGTGTAA...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCAGTACCTATGAGGAATaGAGGGTTTCCATACCCGTC +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSSTYEE*RVSIPV
Trigger: GACGGGTATGGAAACCCTTCATTCCTCATAGGTACT...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCGAGATCAGAGCTCACTaGTCTCAGAGTTCATACAGG +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSEIRAH*SQSSYR
Trigger: CCTGTATGAACTCTGAGATCAGTGAGCTCTGATCTC...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATACACTGGGAGAGACATaGGAAAACAGCAAATGCAGG +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYTLGET*ENSKCR
Trigger: CCTGCATTTGCTGTTTTCTCATGTCTCTCCCAGTGT...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGAACTTCAGTGAGCTATaGTCGTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMNFSEL*SCHCTP
Trigger: TGGAGTGCAGTGGCACGATCATAGCTCACTGAAGTT...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACAGCTCGTCTAGCGGGCTaGGGGGAGACAGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTARLAG*GETEGR
Trigger: CCGCCCCTCTGTCTCCCCGCAGCCCGCTAGACGAGC...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231188.9
CDS-3UTR GCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACATGCTCCTTCTTCAGCTaGCCGCACGCCCGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTCSFFS*PHARPA
Trigger: GGCGGGCCGGGCGTGCGGGCAGCTGAAGAAGGAGCA...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCAGAGCGCCTGGTGCATaGTGTGGAGGGCGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPRAPGA*CGGRGQ
Trigger: TTGCCCACGCCCTCCACAGCATGCACCAGGCGCTCT...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATGAAGCTCGCTTCTGCACATTCTaGTCTGGATGGAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: AVSHHGKRVWSVVRKHEARFCTF*SGWKRM
Trigger: CATCCTCTTCCATCCAGAGCAGAATGTGCAGAAGCG...AGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCCATCCCCAACCCGAACACAACACAAATGCACCCCTGCTCCTTGTTCTCACACTCCGCTTTCGCTTCTaGACATTCTGCTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: THPQPEHNTNAPLLLVLTLRFRF*TFCSGW
Trigger: CCATCCAGAGCAGAATGTGCAGAAGCGAAAGCGGAG...TGTGAGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCGGGTTGGGGATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCAGCATGAAGCTCACATaGTGGAATCGGGGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCSMKLT*WNRGRA
Trigger: AGCTCTACCCCGATTCCAGCATGTGAGCTTCATGCT...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCCATCCCCAACCCGAACACAACACAAATGCACCCCTGCTCCTTGTTCTCACAATGACTCTCTGTCACTaGTCCCAACCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: THPQPEHNTNAPLLLVLTMTLCH*SQPGAP
Trigger: AGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCAT...TGTGAGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCGGGTTGGGGATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCAAAAACAAATGTGCGTaGATCTGCAGCCCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIKNKCA*ICSPSL
Trigger: GAGGCTTGGGCTGCAGATGCACGCACATTTGTTTTT...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGCTGCGGTGCTCACTGTaGCAACGCTCTCTGCACCTA +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLLRCSL*QRSLHL
Trigger: TAGGTGCAGAGAGCGTTGGCACAGTGAGCACCGCAG...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS-3UTR GCA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGCAAGTCTGTGACAGATaGGGCCGAGGCCAACACCCT +
Preference number: 4 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWQVCDR*GRGQHP
Trigger: AGGGTGTTGGCCTCGGCCGCATCTGTCACAGACTTG...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGACGAGTCATGAAGTACTaGTCAAATCCGTCGATGGAG +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGRVMKY*SNPSME
Trigger: CTCCATCGACGGATTTGACCAGTACTTCATGACTCG...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCCATCCCCAACCCGAACACAACACAAATGCACCCCTGCTCCTTGTTCTCACACTGCCATTGGTCGCCTaGTACTGGAAGATGTCGTAC +
Preference number: 4 (lower is better)
Translates to: THPQPEHNTNAPLLLVLTLPLVA*YWKMSY
Trigger: GTACGACATCTTCCAGTACCAGGCGACCAATGGCAG...TGTGAGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCGGGTTGGGGATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCCCGAGGCCCGGACGATaGGCGTGTTGTTGTACCGCA +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPPRPGR*ACCCTA
Trigger: TGCGGTACAACAACACGCCCATCGTCCGGGCCTCGG...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTATCCTCGCCCTTGGGTaGGGCTGCCACCGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTILALG*GCHRGG
Trigger: ACCTCCACGGTGGCAGCCCCACCCAAGGGCGAGGAT...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTACCAGAGAAGCTGCATaGGAAAGTTTGTATGTTGGA +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPTREAA*ESLYVG
Trigger: TCCAACATACAAACTTTCCCATGCAGCTTCTCTGGT...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCATACAATCACGAGGGTaGAACCGCCTTTGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIIQSRG*NRLWQE
Trigger: TTCTTGCCAAAGGCGGTTCCACCCTCGTGATTGTAT...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACGTAATCCGAACACTTTaGGAGGTGGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNVIRTL*EVEAGG
Trigger: TCCTCCTGCCTCCACCTCCCAAAGTGTTCGGATTAC...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCGAAGTCTCAACACAGTaGACCACAGGTGAGACCTTA +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIEVSTQ*TTGETL
Trigger: TAAGGTCTCACCTGTGGTCCACTGTGTTGAGACTTC...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTCAGCCCACACTGCCTTaGATGGAGGGAGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTQPTLP*MEGGEG
Trigger: CCCCTCCCCTCCCTCCATCCAAGGCAGTGTGGGCTG...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS-3UTR TCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCGCCTCTCGGGAGATCTaGACGAAGGCCTCAACCCCA +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPASREI*TKASTP
Trigger: TGGGGTTGAGGCCTTCGTTCAGATCTCCCGAGAGGC...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACCCATCCCCAACCCGAACACAACACAAATGCACCCCTGCTCCTTGTTCTCACATGTGGTGAGGAAGCATaGAGCTCACATGCTGGAATC +
Preference number: 4 (lower is better)
Translates to: THPQPEHNTNAPLLLVLTCGEEA*SSHAGI
Trigger: GATTCCAGCATGTGAGCTTCATGCTTCCTCACCACA...TGTGAGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCGGGTTGGGGATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGGAGTCTGGTCTGTGGTaGGGAAGCATGAAGCTCACA +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEESGLW*GSMKLT
Trigger: TGTGAGCTTCATGCTTCCTCACCACAGACCAGACTC...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATGAAGCTAGTACCTATGAGGAATaGAGGGTTTCCATACCCGTC +
Preference number: 4 (lower is better)
Translates to: AVSHHGKRVWSVVRKHEASTYEE*RVSIPV
Trigger: GACGGGTATGGAAACCCTTCATTCCTCATAGGTACT...AGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATACTTCCCAGTACCTATaGGGAATGAAGGGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYTSQYL*GMKGFH
Trigger: ATGGAAACCCTTCATTCCTCATAGGTACTGGGAAGT...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCACTTCCCAGTACCTATaGGGAATGAAGGGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSTSQYL*GMKGFH
Trigger: ATGGAAACCCTTCATTCCTCATAGGTACTGGGAAGT...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGGCATTCAGCAACAAATaGAACGTCCTAATGTGCACT +
Preference number: 4 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRAFSNK*NVLMCT
Trigger: AGTGCACATTAGGACGTTTCATTTGTTGCTGAATGC...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGGAACATGGCAGAGTGTaGAAGTCGTCTGCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWEHGRV*KSSAGS
Trigger: GCTTCCCGCAGACGACTTTCACACTCTGCCATGTTC...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTAGAGCGCCTGGTGCATaGTGTGGAGGGCGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTRAPGA*CGGRGQ
Trigger: TTGCCCACGCCCTCCACAGCATGCACCAGGCGCTCT...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTCAGTCTGAGGGTCTCTaGCCACTGGCCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTQSEGL*PLAHCL
Trigger: CAGGCAGTGGGCCAGTGGGCAGAGACCCTCAGACTG...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATGAAGCTACACAAATGCACCCCTaGTCCTTGTTCTCACATCAC +
Preference number: 4 (lower is better)
Translates to: AVSHHGKRVWSVVRKHEATQMHP*SLFSHH
Trigger: GTGATGTGAGAACAAGGAGCAGGGGTGCATTTGTGT...AGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCACACAAATGCACCCCTaGTCCTTGTTCTCACATCAC +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCTQMHP*SLFSHH
Trigger: GTGATGTGAGAACAAGGAGCAGGGGTGCATTTGTGT...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCAAAAACAAATGTGCGTaGATCTGCAGCCCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCKNKCA*ICSPSL
Trigger: GAGGCTTGGGCTGCAGATGCACGCACATTTGTTTTT...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTAACGTAATCTTACTCTaGTTTAGAGCTCTCATCCCA +
Preference number: 4 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPNVILL*FRALIP
Trigger: TGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTT...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACCTTGCTGAACTCTCCTaGCTTTGGTTCCCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNLAELS*LWFPGN
Trigger: ATTCCCAGGGAACCAAAGCCAGGAGAGTTCAGCAAG...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGCTGTGCATTTGCGGGTaGAATCGTCTGACTGGGTAC +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQELCICG*NRLTGY
Trigger: GTACCCAGTCAGACGATTCCACCCGCAAATGCACAG...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTGCATCCGCCCATCAGTaGGTTCCATCGCCGGGCACA +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTASAHQ*VPSPGT
Trigger: TGTGCCCGGCGATGGAACCCACTGATGGGCGGATGC...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGACTGACTGTTCACCGTaGACCCGGGCTCTATACAGC +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLTDCSP*TRALYS
Trigger: GCTGTATAGAGCCCGGGTCCACGGTGAACAGTCAGT...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGCCCCATGTTTCATTCTaGGGTCTACACGTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMPHVSF*GLHVLP
Trigger: TGGAAGAACGTGTAGACCCCAGAATGAAACATGGGG...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGGAAAGCCCATGGCATTaGGAATCTCATGGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLESPWH*ESHGGA
Trigger: TGCGCCCCCATGAGATTCCCAATGCCATGGGCTTTC...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATATGTTGGATAAAGTGTaGTTCACCCTCAAAACTAGC +
Preference number: 4 (lower is better)
Translates to: LSLRARGILPRPECLHPDMLDKV*FTLKTS
Trigger: GCTAGTTTTGAGGGTGAACCACACTTTATCCAACAT...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGGGGTGGAACCGCCTTTaGCAAGAAAACACGCCCCAT +
Preference number: 4 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWGWNRL*QENTPH
Trigger: ATGGGGCGTGTTTTCTTGCCAAAGGCGGTTCCACCC...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGAATGGTGCATGCTGTaGAGATACCCTGCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMEWCML*RYPASR
Trigger: TCTACTTGCAGGGTATCTCCACAGCATGCACCATTC...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGGAAAAGCCCTCTTGTaGAAGTCAGTTATTTGTGTA +
Preference number: 4 (lower is better)
Translates to: LSLRARGILPRPECLHPDGKALL*KSVICV
Trigger: TACACAAATAACTGACTTCCACAAGAGGGCTTTTCC...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTGCACACACCGAGTGTaGAAAAGCCCTCTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNCTHRV*KSPLVE
Trigger: TTCCACAAGAGGGCTTTTCCACACTCGGTGTGTGCA...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCTTCAAGGGCAACAAATaGGACAAAACCTTCGGTGCA +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIFKGNK*DKTFGA
Trigger: TGCACCGAAGGTTTTGTCCCATTTGTTGCCCTTGAA...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGAAGTCTCAACACAGTaGACCACAGGTGAGACCTTA +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMEVSTQ*TTGETL
Trigger: TAAGGTCTCACCTGTGGTCCACTGTGTTGAGACTTC...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGTGCAGCTGGCATGTGTaGGCATCAGGATTCACACCC +
Preference number: 4 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWCSWHV*ASGFTP
Trigger: GGGTGTGAATCCTGATGCCCACACATGCCAGCTGCA...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS-3UTR TCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCCCTCCAGGACCCGCCTaGTGTCATCCTCATTGGCAA +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPPPGPA*CHPHWQ
Trigger: TTGCCAATGAGGATGACATCAGGCGGGTCCTGGAGG...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGCCAGGGATCGAGTCATaGAGTACTGGTCAAATCCGT +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEPGIES*STGQIR
Trigger: ACGGATTTGACCAGTACTTCATGACTCGATCCCTGG...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGCATCTCCGTTCTCGTTaGACATCACAGGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLHLRSR*TSQGFL
Trigger: CAGGAACCCCTGTGATGTTCAACGAGAACGGAGATG...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCAGCCCAGGCAGCCGATaGGAGACAGATCCGACATGT +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPSPGSR*ETDPTC
Trigger: ACATGTCGGATCTGTCTCTCATCGGCTGCCTGGGCT...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGGAGTCTGGTCTGTGGTaGGGAAGCATGAAGCTCACA +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLESGLW*GSMKLT
Trigger: TGTGAGCTTCATGCTTCCTCACCACAGACCAGACTC...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGTGGCCAAGGTTGGGGTaGTTTAAGGGAGTACACAGA +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEWPRLG*FKGVHR
Trigger: TCTGTGTACTCCCTTAAATCACCCCAACCTTGGCCA...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGAGCATTCAGCAACAAATaGAACGTCCTAATGTGCACT +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGAFSNK*NVLMCT
Trigger: AGTGCACATTAGGACGTTTCATTTGTTGCTGAATGC...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGAGAAGATTCACACAAGTaGGACAGCCTAAGAAAATGG +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGEDSHK*DSLRKW
Trigger: CCATTTTCTTAGGCTGTCTCACTTGTGTGAATCTTC...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCGAAGATTCACACAAGTaGGACAGCCTAAGAAAATGG +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIEDSHK*DSLRKW
Trigger: CCATTTTCTTAGGCTGTCTCACTTGTGTGAATCTTC...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCGAAGATTCACACAAGTaGGACAGCCTAAGAAAATGG +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSEDSHK*DSLRKW
Trigger: CCATTTTCTTAGGCTGTCTCACTTGTGTGAATCTTC...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTCACTTTCGCCATAGTTaGCCTCGGAGGCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTHFRHS*PRRPAW
Trigger: CCACGCTGGCCTCCGAGGGCAACTATGGCGAAAGTG...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGAAATGTGCGTGCATCTaGAGCCCAAGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLKCACI*SPSLFL
Trigger: GAGGAAGAGGCTTGGGCTGCAGATGCACGCACATTT...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGGGGAGAAATCCTCAGTaGAATCAGTGTAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: ESRLREARTLCQKLHTGEGRNPQ*NQCRNA
Trigger: GGCATTTCTACACTGATTGCACTGAGGATTTCTCCC...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGGAGAAATCCTCAGTaGAATCAGTGTAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMGRNPQ*NQCRNA
Trigger: GGCATTTCTACACTGATTGCACTGAGGATTTCTCCC...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGGAAGCCAGGACTCTATaGCAGAAACTTCACACTGGG +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEEARTL*QKLHTG
Trigger: CCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTC...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATCCCAGAGAGGAACACTaGAATTTTAATTGTGTAAAC +
Preference number: 4 (lower is better)
Translates to: LSLRARGILPRPECLHPDPREEH*NFNCVN
Trigger: GTTTACACAATTAAAATTGCAGTGTTCCTCTCTGGG...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGCTTGCTGAACTCTCCTaGCTTTGGTTCCCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQELAELS*LWFPGN
Trigger: ATTCCCAGGGAACCAAAGCCAGGAGAGTTCAGCAAG...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGACCGGTCAGGTTGGCCTaGCGAGCTGCCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGPVRLA*RAASRT
Trigger: GGTCCTGGAGGCAGCTCGCCAGGCCAACCTGACCGG...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCAGATGGGTGAGGTCTTaGCTCCCCAGCTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPRWVRS*LPSCLS
Trigger: GCTCAGACAGCTGGGGAGCCAAGACCTCACCCATCT...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACCGAGTCATGAAGTACTaGTCAAATCCGTCGATGGAG +
Preference number: 4 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNRVMKY*SNPSME
Trigger: CTCCATCGACGGATTTGACCAGTACTTCATGACTCG...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGCTGCCATTGGTCGCCTaGTACTGGAAGATGTCGTAC +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLLPLVA*YWKMSY
Trigger: GTACGACATCTTCCAGTACCAGGCGACCAATGGCAG...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGACTGCATCCTCGCCCTTaGGTGGGGCTGCCACCGTGG +
Preference number: 4 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGLHPRP*VGLPPW
Trigger: CCACGGTGGCAGCCCCACCCAAGGGCGAGGATGCAG...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACCCCCATGTTTCATTCTaGGGTCTACACGTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNPHVSF*GLHVLP
Trigger: TGGAAGAACGTGTAGACCCCAGAATGAAACATGGGG...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCAGCCACAGGAGTACATaGGCCTCGCGGTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPSHRST*ASRCIR
Trigger: TCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCT...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACGAAGTCTCAACACAGTaGACCACAGGTGAGACCTTA +
Preference number: 4 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNEVSTQ*TTGETL
Trigger: TAAGGTCTCACCTGTGGTCCACTGTGTTGAGACTTC...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGCCAGGGATCGAGTCATaGAGTACTGGTCAAATCCGT +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLPGIES*STGQIR
Trigger: ACGGATTTGACCAGTACTTCATGACTCGATCCCTGG...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGGCATTCAGCAACAAATaGAACGTCCTAATGTGCACT +
Preference number: 4 (lower is better)
Translates to: ESRLREARTLCQKLHTGEAFSNK*NVLMCT
Trigger: AGTGCACATTAGGACGTTTCATTTGTTGCTGAATGC...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGACAGCTCGAATGTACTaGAGAAGCATCCGCCCATCA +
Preference number: 4 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWTARMY*RSIRPS
Trigger: TGATGGGCGGATGCTTCTGCAGTACATTCGAGCTGT...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGATGCCCACTGGCCCACTaGCTGGTACCCGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGCPLAH*LVPATA
Trigger: AGCAGTGGCGGGTACCAGGCAGTGGGCCAGTGGGCA...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACACAGTCTGAGGGTCTCTaGCCACTGGCCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTQSEGL*PLAHCL
Trigger: CAGGCAGTGGGCCAGTGGGCAGAGACCCTCAGACTG...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAATCACAGGCCTCGCAGTaGCAACAGCAGGGGACGCCC +
Preference number: 4 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKSQASQ*QQQGTP
Trigger: GGGCGTCCCCTGCTGTTGGCACTGCGAGGCCTGTGA...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTATCATCCCCACCACCTaGAGGGAGGTGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTIIPTT*REVRLK
Trigger: CTTCAGCCTCACCTCCCTGCAGGTGGTGGGGATGAT...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGACACTCCCGCGCCCACTaGAGGCCCTTCCCATGCTCA +
Preference number: 4 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGHSRAH*RPFPCS
Trigger: TGAGCATGGGAAGGGCCTGCAGTGGGCGCGGGAGTG...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGAGTGTGAAAGTCGTCTaGGGGAAGCCAGGACTCTAT +
Preference number: 4 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWSVKVV*GKPGLY
Trigger: ATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACT...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTGGAGGGCGTGGGCAATaGCGTACACCGCATCAATCA +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTGGRGQ*RTPHQS
Trigger: TGATTGATGCGGTGTACGCCATTGCCCACGCCCTCC...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAAGGGTCTCTGCCCACTaGCCCACTGCCTGGTACCCG +
Preference number: 4 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKRVSAH*PTAWYP
Trigger: CGGGTACCAGGCAGTGGGCCAGTGGGCAGAGACCCT...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACATCTTTTCAGCTGACTaGGCAGTGCCAAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNIFSAD*AVPKKM
Trigger: CATCTTCTTTGGCACTGCCCAGTCAGCTGAAAAGAT...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATCTTCATCATCCTCTTTaGACTTCGGATGAGAGAATA +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYLHHPL*TSDERI
Trigger: TATTCTCTCATCCGAAGTCCAAAGAGGATGATGAAG...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATATGTTGGATAAAGTGTaGTTCACCCTCAAAACTAGC +
Preference number: 4 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYMLDKV*FTLKTS
Trigger: GCTAGTTTTGAGGGTGAACCACACTTTATCCAACAT...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGAATGTTGGATAAAGTGTaGTTCACCCTCAAAACTAGC +
Preference number: 4 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGMLDKV*FTLKTS
Trigger: GCTAGTTTTGAGGGTGAACCACACTTTATCCAACAT...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCAGGAAAACTTTCCCTTaGAGATCAGAGCTCACTGAT +
Preference number: 4 (lower is better)
Translates to: GMNMAECESRLREARTLCRKTFP*RSELTD
Trigger: ATCAGTGAGCTCTGATCTCCAAGGGAAAGTTTTCCT...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATATAAAGTCAGTTACCTaGACTCTTTACAGTAAGCAA +
Preference number: 4 (lower is better)
Translates to: LSLRARGILPRPECLHPDIKSVT*TLYSKQ
Trigger: TTGCTTACTGTAAAGAGTCCAGGTAACTGACTTTAT...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTTTCCTGCGCTGCCATTaGAGCGGACAGCTCGAATGT +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTFLRCH*SGQLEC
Trigger: ACATTCGAGCTGTCCGCTTCAATGGCAGCGCAGGAA...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAACCGACATGTCGCACTTaGGCACCCCTCTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKPTCRT*APLWPA
Trigger: AGCAGGCCAGAGGGGTGCTCAAGTGCGACATGTCGG...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGACCGTGGAGGTGGCCTTaGGGCTCCGCTTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGPWRWP*GSAFAS
Trigger: AGAAGCGAAAGCGGAGCCTCAAGGCCACCTCCACGG...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACCCATCCCCAACCCGAACACAACACAAATGCACCCCTGCTCCTTGTTCTCACATCTTTGGACTTCGGATaGGAGAATAAGTTTAGTCCC +
Preference number: 4 (lower is better)
Translates to: THPQPEHNTNAPLLLVLTSLDFG*ENKFSP
Trigger: GGGACTAAACTTATTCTCTCATCCGAAGTCCAAAGA...TGTGAGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCGGGTTGGGGATGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAACCCTCACCACGGCCATaGCTCTCTGTCACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKPSPRP*LSVTAP
Trigger: GGGAGCAGTGACAGAGAGTCATGGCCGTGGTGAGGG...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGACACTGGGAGAGACATaGGAAAACAGCAAATGCAGG +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLTLGET*ENSKCR
Trigger: CCTGCATTTGCTGTTTTCTCATGTCTCTCCCAGTGT...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTTGCGTTCCTCGCCTGTaGATTTGCGGGTGGAATCGT +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTCVPRL*ICGWNR
Trigger: ACGATTCCACCCGCAAATGCACAGGCGAGGAACGCA...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACATGGAGTCCCGGCCGATaGGTTCCTCGCCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTWSPGR*VPRLCI
Trigger: AATGCACAGGCGAGGAACGCATCGGCCGGGACTCCA...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAGGGTCGCCAGACCACTaGAGGGCCTCCACATCCAGT +
Preference number: 4 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKGSPDH*RASTSS
Trigger: ACTGGATGTGGAGGCCCTGCAGTGGTCTGGCGACCC...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACAAGGTGTGAGCCACCATaGCTGGCCAAGGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTRCEPP*LAKVGV
Trigger: CACCCCAACCTTGGCCAGGCATGGTGGCTCACACCT...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGCGAACACAACACAAATaGACCCCTGCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWRTQHK*TPAPCS
Trigger: AGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCG...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCCCCAGAGAGGAACACTaGAATTTTAATTGTGTAAAC +
Preference number: 4 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSPREEH*NFNCVN
Trigger: GTTTACACAATTAAAATTGCAGTGTTCCTCTCTGGG...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp GCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATGAAGCTAACGTAATCTTACTCTaGTTTAGAGCTCTCATCCCA +
Preference number: 4 (lower is better)
Translates to: AVSHHGKRVWSVVRKHEANVILL*FRALIP
Trigger: TGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTT...AGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAACCTCCTGCTCGTAGGTaGAGTCCCGGCCGATGCGTT +
Preference number: 4 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKPPARR*SPGRCV
Trigger: AACGCATCGGCCGGGACTCCACCTACGAGCAGGAGG...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAACCGAGGCCCGGACGATaGGCGTGTTGTTGTACCGCA +
Preference number: 4 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKPRPGR*ACCCTA
Trigger: TGCGGTACAACAACACGCCCATCGTCCGGGCCTCGG...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACACTTCCTCCCCAGGCCTaGCGCTCAGCTTGCAAATGG +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTLPPQA*RSACKW
Trigger: CCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAG...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp GCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATGAAGCTCCAAAGAATTCACACTaGGAGAGACATGAGAAAACA +
Preference number: 4 (lower is better)
Translates to: AVSHHGKRVWSVVRKHEAPKNSH*ERHEKT
Trigger: TGTTTTCTCATGTCTCTCCCAGTGTGAATTCTTTGG...AGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAAGGTGTGAGCCACCATaGCTGGCCAAGGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKRCEPP*LAKVGV
Trigger: CACCCCAACCTTGGCCAGGCATGGTGGCTCACACCT...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACAACGTAATCTTACTCTaGTTTAGAGCTCTCATCCCA +
Preference number: 4 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNNVILL*FRALIP
Trigger: TGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTT...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGACCTCCAGGCTCAAGATaGGTGAGGTCTTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGPPGSR*VRSWLP
Trigger: GGGGAGCCAAGACCTCACCCATCTTGAGCCTGGAGG...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTCTGTGCATTTGCGGGTaGAATCGTCTGACTGGGTAC +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTLCICG*NRLTGY
Trigger: GTACCCAGTCAGACGATTCCACCCGCAAATGCACAG...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACAGTGAACTCGTCCACCTaGAAGCGGTACCCGTCACAG +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTVNSST*KRYPSQ
Trigger: CTGTGACGGGTACCGCTTCCAGGTGGACGAGTTCAC...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGATCTTTTCAGCTGACTaGGCAGTGCCAAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLIFSAD*AVPKKM
Trigger: CATCTTCTTTGGCACTGCCCAGTCAGCTGAAAAGAT...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTATGAAGCTCACATGCTaGAATCGGGGTAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTMKLTC*NRGRAG
Trigger: CCCAGCTCTACCCCGATTCCAGCATGTGAGCTTCAT...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGTTCAAGGGCAACAAATaGGACAAAACCTTCGGTGCA +
Preference number: 4 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLFKGNK*DKTFGA
Trigger: TGCACCGAAGGTTTTGTCCCATTTGTTGCCCTTGAA...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCATAAAGTCAGTTACCTaGACTCTTTACAGTAAGCAA +
Preference number: 4 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIIKSVT*TLYSKQ
Trigger: TTGCTTACTGTAAAGAGTCCAGGTAACTGACTTTAT...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGATTCAGGACAAGTCTGTaGCAGATGCGGCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGFRTSL*QMRPRP
Trigger: TGGCCTCGGCCGCATCTGTCACAGACTTGTCCTGAA...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS-3UTR GCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGACATCACAGGGGTTCCTaGGCTGCCATTGAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGHHRGS*AAIEAD
Trigger: GTCCGCTTCAATGGCAGCGCAGGAACCCCTGTGATG...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCACACAAATGCACCCCTaGTCCTTGTTCTCACATCAC +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPTQMHP*SLFSHH
Trigger: GTGATGTGAGAACAAGGAGCAGGGGTGCATTTGTGT...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAACATGGGCCTCGCGGTaGATCAGAGTTCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKTWASR*IRVPAR
Trigger: TCTGGCAGGAACTCTGATGCACCGCGAGGCCCATGT...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAACAAACAGCCCACACTaGCTTGGATGGAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKTNSPH*LGWREG
Trigger: CCCCTCCCTCCATCCAAGGCAGTGTGGGCTGTTTGT...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTCTTGCTGAACTCTCCTaGCTTTGGTTCCCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTLAELS*LWFPGN
Trigger: ATTCCCAGGGAACCAAAGCCAGGAGAGTTCAGCAAG...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGATTGGTCGCCTGGTACTaGAAGATGTCGTACCGCCCG +
Preference number: 4 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGLVAWY*KMSYRP
Trigger: CGGGCGGTACGACATCTTCCAGTACCAGGCGACCAA...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAATTGGTCGCCTGGTACTaGAAGATGTCGTACCGCCCG +
Preference number: 4 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKLVAWY*KMSYRP
Trigger: CGGGCGGTACGACATCTTCCAGTACCAGGCGACCAA...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAGTGAACTCGTCCACCTaGAAGCGGTACCCGTCACAG +
Preference number: 4 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGVNSST*KRYPSQ
Trigger: CTGTGACGGGTACCGCTTCCAGGTGGACGAGTTCAC...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGCTTCATCATCCTCTTTaGACTTCGGATGAGAGAATA +
Preference number: 4 (lower is better)
Translates to: CMLWRYPASRPNVRKPQELHHPL*TSDERI
Trigger: TATTCTCTCATCCGAAGTCCAAAGAGGATGATGAAG...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCATACAATCACGAGGGTaGAACCGCCTTTGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPIQSRG*NRLWQE
Trigger: TTCTTGCCAAAGGCGGTTCCACCCTCGTGATTGTAT...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCGAATGGTGCATGCTGTaGAGATACCCTGCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPEWCML*RYPASR
Trigger: TCTACTTGCAGGGTATCTCCACAGCATGCACCATTC...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTTGCACACACCGAGTGTaGAAAAGCCCTCTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTCTHRV*KSPLVE
Trigger: TTCCACAAGAGGGCTTTTCCACACTCGGTGTGTGCA...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
3UTR CAA 72 bp TGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTaGGATAAAGTGTGGTTCACCCTCAAAACTAGCTCC +
Preference number: 4 (lower is better)
Translates to: CAPEKLHGKVCM*DKVWFTLKTSS
Trigger: GGAGCTAGTTTTGAGGGTGAACCACACTTTATCCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAAGCGGGAGGATTGCTTaGGCCCAGGTCGAAACTTCA +
Preference number: 4 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGSGRIA*AQVETS
Trigger: TGAAGTTTCGACCTGGGCTCAAGCAATCCTCCCGCT...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACAATGACTCTCTGTCACTaGTCCCAACCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTMTLCH*SQPGAP
Trigger: AGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCAT...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCAGTGAAAAACAAATGTaGGTGCATCTGCAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPSEKQM*VHLQPK
Trigger: CTTGGGCTGCAGATGCACGCACATTTGTTTTTCACT...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAGGTCAAATCCGTCGATaGAGGCCCTTTTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKGQIRR*RPFWAG
Trigger: TCCTGCCCAAAAGGGCCTCCATCGACGGATTTGACC...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTCGAGTCATGAAGTACTaGTCAAATCCGTCGATGGAG +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTRVMKY*SNPSME
Trigger: CTCCATCGACGGATTTGACCAGTACTTCATGACTCG...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAACTGACTGTTCACCGTaGACCCGGGCTCTATACAGC +
Preference number: 4 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGTDCSP*TRALYS
Trigger: GCTGTATAGAGCCCGGGTCCACGGTGAACAGTCAGT...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCGGAACACAACAAATGTaGAGAAGGAGAGTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPGTQQM*RRRVSS
Trigger: GCTACTGACTCTCCTTCTCCACATTTGTTGTGTTCC...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACACCCCTGTACCCAGAATaGTGCATGCTGTGGAGATAC +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTPLYPE*CMLWRY
Trigger: GTATCTCCACAGCATGCACCATTCTGGGTACAGGGG...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACAGTAATCCGAACACTTTaGGAGGTGGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTVIRTL*EVEAGG
Trigger: TCCTCCTGCCTCCACCTCCCAAAGTGTTCGGATTAC...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCTTCAAGGGCAACAAATaGGACAAAACCTTCGGTGCA +
Preference number: 4 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPFKGNK*DKTFGA
Trigger: TGCACCGAAGGTTTTGTCCCATTTGTTGCCCTTGAA...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACATGGCCAAGGTTGGGGTaGTTTAAGGGAGTACACAGA +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTWPRLG*FKGVHR
Trigger: TCTGTGTACTCCCTTAAATCACCCCAACCTTGGCCA...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACACGCTTCTGCACATTCTaGTCTGGATGGAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTRFCTF*SGWKRM
Trigger: CATCCTCTTCCATCCAGAGCAGAATGTGCAGAAGCG...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTGGGAGAAATCCTCAGTaGAATCAGTGTAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTGRNPQ*NQCRNA
Trigger: GGCATTTCTACACTGATTGCACTGAGGATTTCTCCC...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACAAGTGTGAAAGTCGTCTaGGGGAAGCCAGGACTCTAT +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTSVKVV*GKPGLY
Trigger: ATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACT...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACAACCCAGAATGGTGCATaGTGTGGAGATACCCTGCAA +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTTQNGA*CGDTLQ
Trigger: TTGCAGGGTATCTCCACAGCATGCACCATTCTGGGT...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAGTGGAATCGTCTGACTaGGTACCTGAGCTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKVESSD*VPELVS
Trigger: ACTGACCAGCTCAGGTACCCAGTCAGACGATTCCAC...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAGTGGAATCGTCTGACTaGGTACCTGAGCTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGVESSD*VPELVS
Trigger: ACTGACCAGCTCAGGTACCCAGTCAGACGATTCCAC...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAGTAATCCGAACACTTTaGGAGGTGGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGVIRTL*EVEAGG
Trigger: TCCTCCTGCCTCCACCTCCCAAAGTGTTCGGATTAC...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTTCTTTGGACTTCGGATaGGAGAATAAGTTTAGTCCC +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTSLDFG*ENKFSP
Trigger: GGGACTAAACTTATTCTCTCATCCGAAGTCCAAAGA...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACAAGTACCTATGAGGAATaGAGGGTTTCCATACCCGTC +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTSTYEE*RVSIPV
Trigger: GACGGGTATGGAAACCCTTCATTCCTCATAGGTACT...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTACCAGAGAAGCTGCATaGGAAAGTTTGTATGTTGGA +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTTREAA*ESLYVG
Trigger: TCCAACATACAAACTTTCCCATGCAGCTTCTCTGGT...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACAATACAATCACGAGGGTaGAACCGCCTTTGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTIQSRG*NRLWQE
Trigger: TTCTTGCCAAAGGCGGTTCCACCCTCGTGATTGTAT...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAATGCACACACCGAGTGTaGAAAAGCCCTCTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKCTHRV*KSPLVE
Trigger: TTCCACAAGAGGGCTTTTCCACACTCGGTGTGTGCA...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACAACTTCCCAGTACCTATaGGGAATGAAGGGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTTSQYL*GMKGFH
Trigger: ATGGAAACCCTTCATTCCTCATAGGTACTGGGAAGT...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGACGAACACAACACAAATaGACCCCTGCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGRTQHK*TPAPCS
Trigger: AGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCG...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACAGATTCACACCCAGAATaGCATGAAACAAACAGCCCA +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTDSHPE*HETNSP
Trigger: TGGGCTGTTTGTTTCATGCCATTCTGGGTGTGAATC...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS-3UTR TCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACATTACACACGTGTATCTaGATTTCTTCAGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTLHTCI*ISSGLG
Trigger: CCCCAAACCTGAAGAAATTCAGATACACGTGTGTAA...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR GCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTCCCAGAGAGGAACACTaGAATTTTAATTGTGTAAAC +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTPREEH*NFNCVN
Trigger: GTTTACACAATTAAAATTGCAGTGTTCCTCTCTGGG...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACAAGGAAAACTTTCCCTTaGAGATCAGAGCTCACTGAT +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTRKTFP*RSELTD
Trigger: ATCAGTGAGCTCTGATCTCCAAGGGAAAGTTTTCCT...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTGACAGCCTAAGAAAATaGTTACTATACAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTDSLRK*LLYRSS
Trigger: AGAGCTTCTGTATAGTAACCATTTTCTTAGGCTGTC...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR TCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGATTACACACGTGTATCTaGATTTCTTCAGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGLHTCI*ISSGLG
Trigger: CCCCAAACCTGAAGAAATTCAGATACACGTGTGTAA...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACAGGAAAAGCCCTCTTGTaGAAGTCAGTTATTTGTGTA +
Preference number: 4 (lower is better)
Translates to: IQQQMKRPNVHYREALGTGKALL*KSVICV
Trigger: TACACAAATAACTGACTTCCACAAGAGGGCTTTTCC...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTATAAAGTCAGTTACCTaGACTCTTTACAGTAAGCAA +
Preference number: 4 (lower is better)
Translates to: HQNVILLCFRALIPERNTIKSVT*TLYSKQ
Trigger: TTGCTTACTGTAAAGAGTCCAGGTAACTGACTTTAT...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGACTTCATCATCCTCTTTaGACTTCGGATGAGAGAATA +
Preference number: 4 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGLHHPL*TSDERI
Trigger: TATTCTCTCATCCGAAGTCCAAAGAGGATGATGAAG...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAACCAAAGAATTCACACTaGGAGAGACATGAGAAAACA +
Preference number: 4 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKPKNSH*ERHEKT
Trigger: TGTTTTCTCATGTCTCTCCCAGTGTGAATTCTTTGG...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CCA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAGACAGCCTAAGAAAATaGTTACTATACAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKDSLRK*LLYRSS
Trigger: AGAGCTTCTGTATAGTAACCATTTTCTTAGGCTGTC...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS TCA 90 bp GGCCCATGCCCACCTGGGGCTCGGTCTGCACACTCACATCCAGTCTaGGGGTCTCTGCCCACTGGCCCACTGCCTGGTACCCGCCACTGC +
Preference number: 5 (lower is better)
Translates to: GPCPPGARSAHSHPV*GSLPTGPLPGTRHC
Trigger: GCAGTGGCGGGTACCAGGCAGTGGGCCAGTGGGCAGAGACCCTCAGACTGGATGTGAGTGTGCAGACCGAGCCCCAGGTGGGCATGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518082.1
CDS GCA 90 bp TCTCTGCCCACTGGCCCACTGCCTGGTACCCGCCACTGCTGGCACTaGCATTGGTCGCCTGGTACTGGAAGATGTCGTACCGCCCGGGCG +
Preference number: 5 (lower is better)
Translates to: SLPTGPLPGTRHCWH*HWSPGTGRCRTARA
Trigger: CGCCCGGGCGGTACGACATCTTCCAGTACCAGGCGACCAATGGCAGTGCCAGCAGTGGCGGGTACCAGGCAGTGGGCCAGTGGGCAGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000518082.1
ENST00000650031.1
CDS GCA 90 bp GCCCTGCTACTTGTGGGCCTCTGCATCCTCGCCCTTGGGTGGGGCTaGCACCGTGGAGGTGGCCTTGAGGCTCCGCTTTCGCTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: ALLLVGLCILALGWG*HRGGGLEAPLSLLH
Trigger: GTGCAGAAGCGAAAGCGGAGCCTCAAGGCCACCTCCACGGTGGCAGCCCCACCCAAGGGCGAGGATGCAGAGGCCCACAAGTAGCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
ENST00000650488.1
CDS GCA 90 bp CAGCAAGCAGTCCCGTTCCCACCTGCCCTGCTACTTGTGGGCCTCTaGATCCTCGCCCTTGGGTGGGGCTGCCACCGTGGAGGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: QQAVPFPPALLLVGL*ILALGWGCHRGGGL
Trigger: AAGGCCACCTCCACGGTGGCAGCCCCACCCAAGGGCGAGGATGCAGAGGCCCACAAGTAGCAGGGCAGGTGGGAACGGGACTGCTTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
ENST00000650488.1
CDS GCA 90 bp CACCTGGGGCTCGGTCTGCACACTCACATCCAGTCTGAGGGTCTCTaGCCACTGGCCCACTGCCTGGTACCCGCCACTGCTGGCACTGCC +
Preference number: 5 (lower is better)
Translates to: HLGLGLHTHIQSEGL*PLAHCLVPATAGTA
Trigger: GGCAGTGCCAGCAGTGGCGGGTACCAGGCAGTGGGCCAGTGGGCAGAGACCCTCAGACTGGATGTGAGTGTGCAGACCGAGCCCCAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518082.1
CDS GCA 90 bp CGGGCTGCGCCAGCCGCTGTCGGTTCAGGACAAGTCTGTGACAGATaGGGCCGAGGCCAACACCCTGCAGTCGAGAAACAGCCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: RAAPAAVGSGQVCDR*GRGQHPAVEKQPSR
Trigger: CCTCGAGGGCTGTTTCTCGACTGCAGGGTGTTGGCCTCGGCCGCATCTGTCACAGACTTGTCCTGAACCGACAGCGGCTGGCGCAGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS-3UTR CAA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCCGGCAGCCCGTGTGGTaGGGCGTGGGCCTCATGTCC +
Preference number: 5 (lower is better)
Translates to: RGILPRPECLHPDAQPQVRQPVW*GVGLMS
Trigger: GGACATGAGGCCCACGCCCAACCACACGGGCTGCCG...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS TCA 90 bp TGTGGTTGGGCGTGGGCCTCATGTCCCCAGGACAGGCCTCGCATGTaGACTCGTCCACCTGGAAGCGGTACCCGTCACAGGCCTCGCAGT +
Preference number: 5 (lower is better)
Translates to: CGWAWASCPQDRPRM*TRPPGSGTRHRPRS
Trigger: ACTGCGAGGCCTGTGACGGGTACCGCTTCCAGGTGGACGAGTTCACATGCGAGGCCTGTCCTGGGGACATGAGGCCCACGCCCAACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000518082.1
ENST00000650031.1
CDS TCA 90 bp CGTCTAGCGGGCTGCGCCAGCCGCTGTCGGTTCAGGACAAGTCTGTaGCAGATGCGGCCGAGGCCAACACCCTGCAGTCGAGAAACAGCC +
Preference number: 5 (lower is better)
Translates to: RLAGCASRCRFRTSL*QMRPRPTPCSRETA
Trigger: GGCTGTTTCTCGACTGCAGGGTGTTGGCCTCGGCCGCATCTGTCACAGACTTGTCCTGAACCGACAGCGGCTGGCGCAGCCCGCTAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS GCA 90 bp TGGGGGCAGGGGTGGAGCTGGAATCCAGCCTGCATGCCAGTGCCATaGCGAGCACCTGGAGCAGGGCCATGTGATCCTGCTGGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: WGQGWSWNPACMPVP*RAPGAGPCDPAGRD
Trigger: ATCCCTTCCAGCAGGATCACATGGCCCTGCTCCAGGTGCTCGGCATGGCACTGGCATGCAGGCTGGATTCCAGCTCCACCCCTGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS-3UTR CAA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATAGCTCGGGGTCGGCGTaGACGCGGTCCAGCGCGTAC +
Preference number: 5 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYSSGSA*TRSSAY
Trigger: GTACGCGCTGGACCGCGTCAACGCCGACCCCGAGCT...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGAAGATGGGTGAGGTCTaGGCTCCCCAGCTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRKMGEV*APQLSE
Trigger: CTCAGACAGCTGGGGAGCCAAGACCTCACCCATCTT...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGTCCTCGCCTGTGCATTaGCGGGTGGAATCGTCTGAC +
Preference number: 5 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRSSPVH*RVESSD
Trigger: GTCAGACGATTCCACCCGCAAATGCACAGGCGAGGA...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCCGGCAGCCCGTGTGGTaGGGCGTGGGCCTCATGTCC +
Preference number: 5 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSRQPVW*GVGLMS
Trigger: GGACATGAGGCCCACGCCCAACCACACGGGCTGCCG...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS TCA 90 bp CTGCATCCTCGCCCTTGGGTGGGGCTGCCACCGTGGAGGTGGCCTTaGGGCTCCGCTTTCGCTTCTGCACATTCTGCTCTGGATGGAAGA +
Preference number: 5 (lower is better)
Translates to: LHPRPWVGLPPWRWP*GSAFASAHSALDGR
Trigger: TCTTCCATCCAGAGCAGAATGTGCAGAAGCGAAAGCGGAGCCTCAAGGCCACCTCCACGGTGGCAGCCCCACCCAAGGGCGAGGATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
ENST00000650488.1
CDS-3UTR CAA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGAGCTCGGGGTCGGCGTaGACGCGGTCCAGCGCGTAC +
Preference number: 5 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMSSGSA*TRSSAY
Trigger: GTACGCGCTGGACCGCGTCAACGCCGACCCCGAGCT...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCCACCTGCCCTGCTACTaGTGGGCCTCTGCATCCTCG +
Preference number: 5 (lower is better)
Translates to: RGILPRPECLHPDAQPQVHLPCY*WASASS
Trigger: CGAGGATGCAGAGGCCCACAAGTAGCAGGGCAGGTG...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTACTCCCGCCTATTGCTaGGGAGGATGGAACCCCGCG +
Preference number: 5 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPTPAYC*GGWNPA
Trigger: CGCGGGGTTCCATCCTCCCAAGCAATAGGCGGGAGT...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS TCA 90 bp AGCCTGCATGCCAGTGCCATGCCGAGCACCTGGAGCAGGGCCATGTaGTCCTGCTGGAAGGGATGCTTTGCAGTCATCTGCCCACCCAGA +
Preference number: 5 (lower is better)
Translates to: SLHASAMPSTWSRAM*SCWKGCFAVICPPR
Trigger: TCTGGGTGGGCAGATGACTGCAAAGCATCCCTTCCAGCAGGATCACATGGCCCTGCTCCAGGTGCTCGGCATGGCACTGGCATGCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS GCA 90 bp ACAGGGGTTCCTGCGCTGCCATTGAAGCGGACAGCTCGAATGTACTaGAGAAGCATCCGCCCATCAGTGGGTTCCATCGCCGGGCACAGG +
Preference number: 5 (lower is better)
Translates to: TGVPALPLKRTARMY*RSIRPSVGSIAGHR
Trigger: CCTGTGCCCGGCGATGGAACCCACTGATGGGCGGATGCTTCTGCAGTACATTCGAGCTGTCCGCTTCAATGGCAGCGCAGGAACCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATCTGCTGGCACTGCCATaGGTCGCCTGGTACTGGAAG +
Preference number: 5 (lower is better)
Translates to: LSLRARGILPRPECLHPDLLALP*VAWYWK
Trigger: CTTCCAGTACCAGGCGACCAATGGCAGTGCCAGCAG...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS TCA 90 bp AGTACTGGTCAAATCCGTCGATGGAGGCCCTTTTGGGCAGGATGGTaGTGGCCCCAACGGCCACGTCCTCCAGGCTCAAGATGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: STGQIRRWRPFWAGW*WPQRPRPPGSRWVR
Trigger: CCTCACCCATCTTGAGCCTGGAGGACGTGGCCGTTGGGGCCATCACCATCCTGCCCAAAAGGGCCTCCATCGACGGATTTGACCAGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS TCA 90 bp CTGCATCAGACACAGCACTTTCCAGGGACAAATCCATTCCAGCCCTaGCAGAGGCCCCTGCGGGTCAGGATCCCCTTGAGGCTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: LHQTQHFPGTNPFQP*QRPLRVRIPLRLWP
Trigger: AGGCCAGAGCCTCAAGGGGATCCTGACCCGCAGGGGCCTCTGTCAGGGCTGGAATGGATTTGTCCCTGGAAAGTGCTGTGTCTGATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS GCA 90 bp ACAACCTCAAGCCAAGGAAAGCTGGGGAACAGGAACGAAGCCACCTaGATAAAGGCGGGACCCTGGAAGGGCTGCCCCACACGTTCGTGC +
Preference number: 5 (lower is better)
Translates to: TTSSQGKLGNRNEAT*IKAGPWKGCPTRSC
Trigger: GCACGAACGTGTGGGGCAGCCCTTCCAGGGTCCCGCCTTTATGCAGGTGGCTTCGTTCCTGTTCCCCAGCTTTCCTTGGCTTGAGGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS-3UTR CAA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATATGATGCCCCGGGCGTaGGGCGTCTCCATGAGTCTC +
Preference number: 5 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYMMPRA*GVSMSL
Trigger: GAGACTCATGGAGACGCCCAACGCCCGGGGCATCAT...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATAAGATGGGTGAGGTCTaGGCTCCCCAGCTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: LSLRARGILPRPECLHPDKMGEV*APQLSE
Trigger: CTCAGACAGCTGGGGAGCCAAGACCTCACCCATCTT...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCACCGTGGAGGTGGCCTaGAGGCTCCGCTTTCGCTTC +
Preference number: 5 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSTVEVA*RLRFRF
Trigger: GAAGCGAAAGCGGAGCCTCAAGGCCACCTCCACGGT...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp AGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCAGGGTGGAACCGCCTTaGGCAAGAAAACACGCCCCA +
Preference number: 5 (lower is better)
Translates to: RGILPRPECLHPDAQPQVRVEPP*ARKHAP
Trigger: TGGGGCGTGTTTTCTTGCCAAAGGCGGTTCCACCCT...GACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGATCGATGGAGGCCCTTTaGGGCAGGATGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGSMEAL*GRMVMA
Trigger: GGCCATCACCATCCTGCCCAAAAGGGCCTCCATCGA...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp ACCCATCCCCAACCCGAACACAACACAAATGCACCCCTGCTCCTTGTTCTCACAGGCACGCCACGGGCCTaGATGGCGTACACTGTGCAC +
Preference number: 5 (lower is better)
Translates to: THPQPEHNTNAPLLLVLTGTPRA*MAYTVH
Trigger: GTGCACAGTGTACGCCATCAAGGCCCGTGGCGTGCC...TGTGAGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCGGGTTGGGGATGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACGGCACGCCACGGGCCTaGATGGCGTACACTGTGCAC +
Preference number: 5 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNGTPRA*MAYTVH
Trigger: GTGCACAGTGTACGCCATCAAGGCCCGTGGCGTGCC...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGACCGTGGAGGTGGCCTaGAGGCTCCGCTTTCGCTTC +
Preference number: 5 (lower is better)
Translates to: ESRLREARTLCQKLHTGETVEVA*RLRFRF
Trigger: GAAGCGAAAGCGGAGCCTCAAGGCCACCTCCACGGT...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTTGTAATCCGAACACTTaGGGAGGTGGAGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPCNPNT*GGGGRR
Trigger: CCTCCTGCCTCCACCTCCCAAAGTGTTCGGATTACA...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp GCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATGAAGCTTCGATGGAGGCCCTTTaGGGCAGGATGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: AVSHHGKRVWSVVRKHEASMEAL*GRMVMA
Trigger: GGCCATCACCATCCTGCCCAAAAGGGCCTCCATCGA...AGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp CTCTCCCTCCGTGCCAGAGGAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCATCTCCGTTCTCGTaGAACATCACAGGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: LSLRARGILPRPECLHPDASPFS*NITGVP
Trigger: AGGAACCCCTGTGATGTTCAACGAGAACGGAGATGC...ATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTCCTCTGGCACGGAGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp GCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATGAAGCTCTGCTGGCACTGCCATaGGTCGCCTGGTACTGGAAG +
Preference number: 5 (lower is better)
Translates to: AVSHHGKRVWSVVRKHEALLALP*VAWYWK
Trigger: CTTCCAGTACCAGGCGACCAATGGCAGTGCCAGCAG...AGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCTGCTGGCACTGCCATaGGTCGCCTGGTACTGGAAG +
Preference number: 5 (lower is better)
Translates to: GMNMAECESRLREARTLCLLALP*VAWYWK
Trigger: CTTCCAGTACCAGGCGACCAATGGCAGTGCCAGCAG...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGTCTGCATCCTCGCCCTaGGGTGGGGCTGCCACCGTG +
Preference number: 5 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWSASSP*GGAATV
Trigger: CACGGTGGCAGCCCCACCCAAGGGCGAGGATGCAGA...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp GAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTTCACACTGGGGAGACGCGGAGCATGGTCTaGGCAAACTCCCTGCCACTG +
Preference number: 5 (lower is better)
Translates to: ESRLREARTLCQKLHTGETRSMV*ANSLPL
Trigger: CAGTGGCAGGGAGTTTGCCAAGACCATGCTCCGCGT...CTCCCCAGTGTGAAGTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp ACCACGGCCATGACTCTCTGTCACTGCTCCCAACCTGGAGCTCCTAAACCCATCGGCCTGGCGCTCAGCTaGCAAATGGACTTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: TTAMTLCHCSQPGAPKPIGLALS*QMDFPV
Trigger: TACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCC...GATGGGTTTAGGAGCTCCAGGTTGGGAGCAGTGACAGAGAGTCATGGCCGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATGGCCTGGCGCTCAGCTaGCAAATGGACTTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYGLALS*QMDFPV
Trigger: TACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCC...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGAGGCCTGGCGCTCAGCTaGCAAATGGACTTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGGLALS*QMDFPV
Trigger: TACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCC...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS GCA 90 bp GCTGCGGAGAAGGGCTGTGCCGCCCGTATATGTTGGCAACATCAGTaGAGTGTGCATAAGGGGCAGCTTGGTGTCCTCTTCCTGCATTCT +
Preference number: 5 (lower is better)
Translates to: AAEKGCAARICWQHQ*SVHKGQLGVLFLHS
Trigger: AGAATGCAGGAAGAGGACACCAAGCTGCCCCTTATGCACACTGCACTGATGTTGCCAACATATACGGGCGGCACAGCCCTTCTCCGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS-3UTR CAA 90 bp GCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGAAGCATGAAGCTGTTCCTGCGCTGCCATaGAAGCGGACAGCTCGAATG +
Preference number: 5 (lower is better)
Translates to: AVSHHGKRVWSVVRKHEAVPALP*KRTARM
Trigger: CATTCGAGCTGTCCGCTTCAATGGCAGCGCAGGAAC...AGCTTCATGCTTCCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp ACCCATCCCCAACCCGAACACAACACAAATGCACCCCTGCTCCTTGTTCTCACAGGAAAGCCCATGGCATaGGGAATCTCATGGGGGCGC +
Preference number: 5 (lower is better)
Translates to: THPQPEHNTNAPLLLVLTGKPMA*GISWGR
Trigger: GCGCCCCCATGAGATTCCCAATGCCATGGGCTTTCC...TGTGAGAACAAGGAGCAGGGGTGCATTTGTGTTGTGTTCGGGTTGGGGATGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp AATCTCATGGGGGCGCACCCCAGTTCCTCAGCTCACTCCCGCGCCCACTGCAGGTGTGGAAAAGCCCTCTaGTGGAAGTCAGTTATTTGT +
Preference number: 5 (lower is better)
Translates to: NLMGAHPSSSAHSRAHCRCGKAL*WKSVIC
Trigger: ACAAATAACTGACTTCCACAAGAGGGCTTTTCCACA...CCTGCAGTGGGCGCGGGAGTGAGCTGAGGAACTGGGGTGCGCCCCCATGAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGATGTTCCTGCGGTaGTTCTCCAGGGATCGAGTC +
Preference number: 5 (lower is better)
Translates to: GMNMAECESRLREARTLCQMFLR*FSRDRV
Trigger: GACTCGATCCCTGGAGAACAACCGCAGGAACATCTG...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGACGCGGAGCATGGTCTaGGCAAACTCCCTGCCACTG +
Preference number: 5 (lower is better)
Translates to: CMLWRYPASRPNVRKPQETRSMV*ANSLPL
Trigger: CAGTGGCAGGGAGTTTGCCAAGACCATGCTCCGCGT...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGGGAAAGCCCATGGCATaGGGAATCTCATGGGGGCGC +
Preference number: 5 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEGKPMA*GISWGR
Trigger: GCGCCCCCATGAGATTCCCAATGCCATGGGCTTTCC...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp GGCATGAACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCTGTAATCCGAACACTTaGGGAGGTGGAGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: GMNMAECESRLREARTLCCNPNT*GGGGRR
Trigger: CCTCCTGCCTCCACCTCCCAAAGTGTTCGGATTACA...GCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGTTCATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCGGTTCCCTGGGAATCTaGATAGACTGGGCAATACAG +
Preference number: 5 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSGSLGI*IDWAIQ
Trigger: CTGTATTGCCCAGTCTATCAAGATTCCCAGGGAACC...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGCATCTCCGTTCTCGTaGAACATCACAGGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMASPFS*NITGVP
Trigger: AGGAACCCCTGTGATGTTCAACGAGAACGGAGATGC...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp GAATCCTACCCAGGCCTGAGTGCCTCCATCCAGATGCACAGCCCCAGGTCTCCTACACGGTTAGCGTGGTaGTCTGGATGTAGATCTTTT +
Preference number: 5 (lower is better)
Translates to: ESYPGLSASIQMHSPRSPTRLAW*SGCRSF
Trigger: AAAAGATCTACATCCAGACAACCACGCTAACCGTGT...AGGAGACCTGGGGCTGTGCATCTGGATGGAGGCACTCAGGCCTGGGTAGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp ACAACATCTTCAGTAACAGAGGATGTCCCCCTGTACCCAGAATGGTGCATGCTGTCCCACTCCCGCCTATaGCTTGGGAGGATGGAACCC +
Preference number: 5 (lower is better)
Translates to: TTSSVTEDVPLYPEWCMLSHSRL*LGRMEP
Trigger: GGGTTCCATCCTCCCAAGCAATAGGCGGGAGTGGGA...CAGCATGCACCATTCTGGGTACAGGGGGACATCCTCTGTTACTGAAGATGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS GCA 90 bp AAGGGGCAGCTTGGTGTCCTCTTCCTGCATTCTAGCCATTACCAATaGCATTTACTGCGCCCCTTCAAGGTAGATGGATGTGGCCGGAAG +
Preference number: 5 (lower is better)
Translates to: KGQLGVLFLHSSHYQ*HLLRPFKVDGCGRK
Trigger: CTTCCGGCCACATCCATCTACCTTGAAGGGGCGCAGTAAATGGCATTGGTAATGGCTAGAATGCAGGAAGAGGACACCAAGCTGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS GCA 90 bp AGAAGGGCTGTGCCGCCCGTATATGTTGGCAACATCAGTGCAGTGTaGATAAGGGGCAGCTTGGTGTCCTCTTCCTGCATTCTAGCCATT +
Preference number: 5 (lower is better)
Translates to: RRAVPPVYVGNISAV*IRGSLVSSSCILAI
Trigger: AATGGCTAGAATGCAGGAAGAGGACACCAAGCTGCCCCTTATGCACACTGCACTGATGTTGCCAACATATACGGGCGGCACAGCCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS-3UTR CAA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACAAGCTCGGGGTCGGCGTaGACGCGGTCCAGCGCGTAC +
Preference number: 5 (lower is better)
Translates to: IQQQMKRPNVHYREALGTSSGSA*TRSSAY
Trigger: GTACGCGCTGGACCGCGTCAACGCCGACCCCGAGCT...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCCACCTGCCCTGCTACTaGTGGGCCTCTGCATCCTCG +
Preference number: 5 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPHLPCY*WASASS
Trigger: CGAGGATGCAGAGGCCCACAAGTAGCAGGGCAGGTG...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGAGGGTGGAACCGCCTTaGGCAAGAAAACACGCCCCA +
Preference number: 5 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWRVEPP*ARKHAP
Trigger: TGGGGCGTGTTTTCTTGCCAAAGGCGGTTCCACCCT...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCTCGATGGAGGCCCTTTaGGGCAGGATGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPSMEAL*GRMVMA
Trigger: GGCCATCACCATCCTGCCCAAAAGGGCCTCCATCGA...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGCAGATGTTCCTGCGGTaGTTCTCCAGGGATCGAGTC +
Preference number: 5 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWQMFLR*FSRDRV
Trigger: GACTCGATCCCTGGAGAACAACCGCAGGAACATCTG...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp CTCTTCCTCCCCAGGCCTGGCGCTCAGCTTGCAAATGGACTTCCCAGTACCTATCCTGAGCTGGTCAGTTaGCAGTTAAAATTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LFLPRPGAQLANGLPSTYPELVS*QLKFSS
Trigger: GGAAGAGAATTTTAACTGCAAACTGACCAGCTCAGG...ATAGGTACTGGGAAGTCCATTTGCAAGCTGAGCGCCAGGCCTGGGGAGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAACGGCAGCCCGTGTGGTaGGGCGTGGGCCTCATGTCC +
Preference number: 5 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKRQPVW*GVGLMS
Trigger: GGACATGAGGCCCACGCCCAACCACACGGGCTGCCG...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp ACCGTGGACCCGGGCTCTATACAGCTTCCACCTCGAGGCAAGAGGAAGAAAGGAACACGGTTAGCGTGGTaGTCTGGATGTAGATCTTTT +
Preference number: 5 (lower is better)
Translates to: TVDPGSIQLPPRGKRKKGTRLAW*SGCRSF
Trigger: AAAAGATCTACATCCAGACAACCACGCTAACCGTGT...TCCTTTCTTCCTCTTGCCTCGAGGTGGAAGCTGTATAGAGCCCGGGTCCACGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp ATTCAGCAACAAATGAAACGTCCTAATGTGCACTATAGAGAAGCCCTAGGAACATCTGCATCCTCGCCCTaGGGTGGGGCTGCCACCGTG +
Preference number: 5 (lower is better)
Translates to: IQQQMKRPNVHYREALGTSASSP*GGAATV
Trigger: CACGGTGGCAGCCCCACCCAAGGGCGAGGATGCAGA...TGTTCCTAGGGCTTCTCTATAGTGCACATTAGGACGTTTCATTTGTTGCTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTCACCTGCCCTGCTACTaGTGGGCCTCTGCATCCTCG +
Preference number: 5 (lower is better)
Translates to: HQNVILLCFRALIPERNTHLPCY*WASASS
Trigger: CGAGGATGCAGAGGCCCACAAGTAGCAGGGCAGGTG...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp ACCTTCTCGGTGGCTGTTTCCCACCATGGGAAGCGAGTCTGGTCTGTGGTGAGGGGGAAAGTTTGTATGTaGGATAAAGTGTGGTTCACC +
Preference number: 5 (lower is better)
Translates to: TFSVAVSHHGKRVWSVVRGKVCM*DKVWFT
Trigger: GGTGAACCACACTTTATCCAACATACAAACTTTCCC...CCTCACCACAGACCAGACTCGCTTCCCATGGTGGGAAACAGCCACCGAGAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS GCA 90 bp AACATCAGTGCAGTGTGCATAAGGGGCAGCTTGGTGTCCTCTTCCTaGATTCTAGCCATTACCAATGCCATTTACTGCGCCCCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: NISAVCIRGSLVSSS*ILAITNAIYCAPSR
Trigger: CCTTGAAGGGGCGCAGTAAATGGCATTGGTAATGGCTAGAATGCAGGAAGAGGACACCAAGCTGCCCCTTATGCACACTGCACTGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS-3UTR CAA 90 bp AAAGAAATGATCACAGGCAGAAACTGTATGCACACACCGAGTGTGGAAAAGCCCGTTCCTGCGCTGCCATaGAAGCGGACAGCTCGAATG +
Preference number: 5 (lower is better)
Translates to: KEMITGRNCMHTPSVEKPVPALP*KRTARM
Trigger: CATTCGAGCTGTCCGCTTCAATGGCAGCGCAGGAAC...GGGCTTTTCCACACTCGGTGTGTGCATACAGTTTCTGCCTGTGATCATTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp CGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGGGAAAGTTTGTATGTTGGGCATCTCCGTTCTCGTaGAACATCACAGGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: RSKPTAHQRSCMGKFVCWASPFS*NITGVP
Trigger: AGGAACCCCTGTGATGTTCAACGAGAACGGAGATGC...CCAACATACAAACTTTCCCATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGATCTGCATCCTCGCCCTaGGGTGGGGCTGCCACCGTG +
Preference number: 5 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGSASSP*GGAATV
Trigger: CACGGTGGCAGCCCCACCCAAGGGCGAGGATGCAGA...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp CCGAATGTGAGAAAGCCACAGGAGTACATGGGCCTCGCGGTGCATCAGAGTTCCGGGAAAGTTTGTATGTaGGATAAAGTGTGGTTCACC +
Preference number: 5 (lower is better)
Translates to: PNVRKPQEYMGLAVHQSSGKVCM*DKVWFT
Trigger: GGTGAACCACACTTTATCCAACATACAAACTTTCCC...GGAACTCTGATGCACCGCGAGGCCCATGTACTCCTGTGGCTTTCTCACATTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACCCTGAGCTGGTCAGTTaGCAGTTAAAATTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNPELVS*QLKFSS
Trigger: GGAAGAGAATTTTAACTGCAAACTGACCAGCTCAGG...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAGGCACGCCACGGGCCTaGATGGCGTACACTGTGCAC +
Preference number: 5 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKGTPRA*MAYTVH
Trigger: GTGCACAGTGTACGCCATCAAGGCCCGTGGCGTGCC...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp CAGAAGCACCTAGTCCCACGGTCAAAACCAACTGCGCACCAGAGAAGCTGCATGTGTGGAAAAGCCCTCTaGTGGAAGTCAGTTATTTGT +
Preference number: 5 (lower is better)
Translates to: QKHLVPRSKPTAHQRSCMCGKAL*WKSVIC
Trigger: ACAAATAACTGACTTCCACAAGAGGGCTTTTCCACA...CATGCAGCTTCTCTGGTGCGCAGTTGGTTTTGACCGTGGGACTAGGTGCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAATGATGCCCCGGGCGTaGGGCGTCTCCATGAGTCTC +
Preference number: 5 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGMMPRA*GVSMSL
Trigger: GAGACTCATGGAGACGCCCAACGCCCGGGGCATCAT...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp CATCAGAACGTAATCTTACTCTGCTTTAGAGCTCTCATCCCAGAGAGGAACACTCAGATGTTCCTGCGGTaGTTCTCCAGGGATCGAGTC +
Preference number: 5 (lower is better)
Translates to: HQNVILLCFRALIPERNTQMFLR*FSRDRV
Trigger: GACTCGATCCCTGGAGAACAACCGCAGGAACATCTG...AGTGTTCCTCTCTGGGATGAGAGCTCTAAAGCAGAGTAAGATTACGTTCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp TGCATGCTGTGGAGATACCCTGCAAGTAGACCGAATGTGAGAAAGCCACAGGAGCCTGAGCTGGTCAGTTaGCAGTTAAAATTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: CMLWRYPASRPNVRKPQEPELVS*QLKFSS
Trigger: GGAAGAGAATTTTAACTGCAAACTGACCAGCTCAGG...CTCCTGTGGCTTTCTCACATTCGGTCTACTTGCAGGGTATCTCCACAGCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAACCGTGGAGGTGGCCTaGAGGCTCCGCTTTCGCTTC +
Preference number: 5 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGTVEVA*RLRFRF
Trigger: GAAGCGAAAGCGGAGCCTCAAGGCCACCTCCACGGT...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp ACATGGCAGAGTGTGAAAGTCGTCTGCGGGAAGCCAGGACTCTATGCCAGAAACTGTGGAAAAGCCCTCTaGTGGAAGTCAGTTATTTGT +
Preference number: 5 (lower is better)
Translates to: TWQSVKVVCGKPGLYARNCGKAL*WKSVIC
Trigger: ACAAATAACTGACTTCCACAAGAGGGCTTTTCCACA...GTTTCTGGCATAGAGTCCTGGCTTCCCGCAGACGACTTTCACACTCTGCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAGGAAAGCCCATGGCATaGGGAATCTCATGGGGGCGC +
Preference number: 5 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGGKPMA*GISWGR
Trigger: GCGCCCCCATGAGATTCCCAATGCCATGGGCTTTCC...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAAAGATGGGTGAGGTCTaGGCTCCCCAGCTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGKMGEV*APQLSE
Trigger: CTCAGACAGCTGGGGAGCCAAGACCTCACCCATCTT...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGATCCTCGCCTGTGCATTaGCGGGTGGAATCGTCTGAC +
Preference number: 5 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGSSPVH*RVESSD
Trigger: GTCAGACGATTCCACCCGCAAATGCACAGGCGAGGA...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAGTTCCTGCGCTGCCATaGAAGCGGACAGCTCGAATG +
Preference number: 5 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGVPALP*KRTARM
Trigger: CATTCGAGCTGTCCGCTTCAATGGCAGCGCAGGAAC...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp TCAGGGGTCCAAATAAATTGGACCTCAAAGAATTCAAACCCATGCATGCAAAAAAGGGTGGAACCGCCTTaGGCAAGAAAACACGCCCCA +
Preference number: 5 (lower is better)
Translates to: SGVQINWTSKNSNPCMQKRVEPP*ARKHAP
Trigger: TGGGGCGTGTTTTCTTGCCAAAGGCGGTTCCACCCT...TTTTTGCATGCATGGGTTTGAATTCTTTGAGGTCCAATTTATTTGGACCCCTGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAGGTTCCCTGGGAATCTaGATAGACTGGGCAATACAG +
Preference number: 5 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGGSLGI*IDWAIQ
Trigger: CTGTATTGCCCAGTCTATCAAGATTCCCAGGGAACC...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAACACGGTTAGCGTGGTaGTCTGGATGTAGATCTTTT +
Preference number: 5 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGTRLAW*SGCRSF
Trigger: AAAAGATCTACATCCAGACAACCACGCTAACCGTGT...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS-3UTR CAA 90 bp TGGAAAAGCCCTCTTGTGGAAGTCAGTTATTTGTGTACATCAGAAAATTCTGGAGGGAAAGTTTGTATGTaGGATAAAGTGTGGTTCACC +
Preference number: 5 (lower is better)
Translates to: WKSPLVEVSYLCTSENSGGKVCM*DKVWFT
Trigger: GGTGAACCACACTTTATCCAACATACAAACTTTCCC...TCCAGAATTTTCTGATGTACACAAATAACTGACTTCCACAAGAGGGCTTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS CCA 72 bp GAGAAGGCGCTCGGGGCGCGCCTTCCACTTCGGCTCTaGGGAGTTAGCTCAGCCGGCCTGCCCGGGCCTCCG +
Preference number: 6 (lower is better)
Translates to: EKALGARLPLRL*GVSSAGLPGPP
Trigger: CGGAGGCCCGGGCAGGCCGGCTGAGCTAACTCCCCAGAGCCGAAGTGGAAGGCGCGCCCCGAGCGCCTTCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231188.9
CDS CCA 72 bp CCCAGGGGGAGGACCAGCTCAGGCGCACCACAGGTGTaGGGCGGCAGCCCGTGTGGTTGGGCGTGGGCCTCA +
Preference number: 6 (lower is better)
Translates to: PRGRTSSGAPQV*GGSPCGWAWAS
Trigger: TGAGGCCCACGCCCAACCACACGGGCTGCCGCCCCACACCTGTGGTGCGCCTGAGCTGGTCCTCCCCCTGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000518082.1
ENST00000650031.1
CDS CAA 90 bp GACCAGCTCAGGCGCACCACAGGTGTGGGGCGGCAGCCCGTGTGGTaGGGCGTGGGCCTCATGTCCCCAGGACAGGCCTCGCATGTGAAC +
Preference number: 6 (lower is better)
Translates to: DQLRRTTGVGRQPVW*GVGLMSPGQASHVN
Trigger: GTTCACATGCGAGGCCTGTCCTGGGGACATGAGGCCCACGCCCAACCACACGGGCTGCCGCCCCACACCTGTGGTGCGCCTGAGCTGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000518082.1
ENST00000650031.1
CDS GCA 72 bp CAGGCTGGGGCGTCTGCCTCCGGGATCCTGGGCCCATaGCCACCTGGGGCTCGGTCTGCACACTCACATCCA +
Preference number: 6 (lower is better)
Translates to: QAGASASGILGP*PPGARSAHSHP
Trigger: TGGATGTGAGTGTGCAGACCGAGCCCCAGGTGGGCATGGGCCCAGGATCCCGGAGGCAGACGCCCCAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518082.1
CDS GCA 72 bp GTCCCGTTCCCACCTGCCCTGCTACTTGTGGGCCTCTaGATCCTCGCCCTTGGGTGGGGCTGCCACCGTGGA +
Preference number: 6 (lower is better)
Translates to: VPFPPALLLVGL*ILALGWGCHRG
Trigger: TCCACGGTGGCAGCCCCACCCAAGGGCGAGGATGCAGAGGCCCACAAGTAGCAGGGCAGGTGGGAACGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
ENST00000650488.1
CDS CCA 72 bp CTGCTACTTGTGGGCCTCTGCATCCTCGCCCTTGGGTaGGGCTGCCACCGTGGAGGTGGCCTTGAGGCTCCG +
Preference number: 6 (lower is better)
Translates to: LLLVGLCILALG*GCHRGGGLEAP
Trigger: CGGAGCCTCAAGGCCACCTCCACGGTGGCAGCCCCACCCAAGGGCGAGGATGCAGAGGCCCACAAGTAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
ENST00000650488.1
CDS CAA 90 bp GCCCACTGGCCCACTGCCTGGTACCCGCCACTGCTGGCACTGCCATaGGTCGCCTGGTACTGGAAGATGTCGTACCGCCCGGGCGCATCT +
Preference number: 6 (lower is better)
Translates to: AHWPTAWYPPLLALP*VAWYWKMSYRPGAS
Trigger: AGATGCGCCCGGGCGGTACGACATCTTCCAGTACCAGGCGACCAATGGCAGTGCCAGCAGTGGCGGGTACCAGGCAGTGGGCCAGTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000518082.1
ENST00000650031.1
CDS CAA 90 bp CGTTCCCACCTGCCCTGCTACTTGTGGGCCTCTGCATCCTCGCCCTaGGGTGGGGCTGCCACCGTGGAGGTGGCCTTGAGGCTCCGCTTT +
Preference number: 6 (lower is better)
Translates to: RSHLPCYLWASASSP*GGAATVEVALRLRF
Trigger: AAAGCGGAGCCTCAAGGCCACCTCCACGGTGGCAGCCCCACCCAAGGGCGAGGATGCAGAGGCCCACAAGTAGCAGGGCAGGTGGGAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
ENST00000650488.1
CDS CCA 72 bp TCCAGTCTGAGGGTCTCTGCCCACTGGCCCACTGCCTaGTACCCGCCACTGCTGGCACTGCCATTGGTCGCC +
Preference number: 6 (lower is better)
Translates to: SSLRVSAHWPTA*YPPLLALPLVA
Trigger: GGCGACCAATGGCAGTGCCAGCAGTGGCGGGTACCAGGCAGTGGGCCAGTGGGCAGAGACCCTCAGACTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000518082.1
ENST00000650031.1
CDS CCA 72 bp AGCAAGCAGTCCCGTTCCCACCTGCCCTGCTACTTGTaGGCCTCTGCATCCTCGCCCTTGGGTGGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: SKQSRSHLPCYL*ASASSPLGGAA
Trigger: GGCAGCCCCACCCAAGGGCGAGGATGCAGAGGCCCACAAGTAGCAGGGCAGGTGGGAACGGGACTGCTTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
ENST00000650488.1
CDS CCA 72 bp GCAGCCCAAGAGGGGTCCGTCCAAAGGCCCGTGACCTaGCAGCTGCGGAGAAGGGCTGTGCCGCCCGTATAT +
Preference number: 6 (lower is better)
Translates to: AAQEGSVQRPVT*QLRRRAVPPVY
Trigger: ATATACGGGCGGCACAGCCCTTCTCCGCAGCTGCCAGGTCACGGGCCTTTGGACGGACCCCTCTTGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS CCA 72 bp CGGCTTTCCTCGCAGCTCCCACTCCCGCCTATTGCTTaGGAGGATGGAACCCCGCGGGGTCGTTCTGGCTCC +
Preference number: 6 (lower is better)
Translates to: RLSSQLPLPPIA*EDGTPRGRSGS
Trigger: GGAGCCAGAACGACCCCGCGGGGTTCCATCCTCCCAAGCAATAGGCGGGAGTGGGAGCTGCGAGGAAAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS CAA 72 bp GGCAGCAAGCAGTCCCGTTCCCACCTGCCCTGCTACTaGTGGGCCTCTGCATCCTCGCCCTTGGGTGGGGCT +
Preference number: 6 (lower is better)
Translates to: GSKQSRSHLPCY*WASASSPLGGA
Trigger: AGCCCCACCCAAGGGCGAGGATGCAGAGGCCCACAAGTAGCAGGGCAGGTGGGAACGGGACTGCTTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
ENST00000650488.1
CDS CAA 72 bp CCGGCTTTCCTCGCAGCTCCCACTCCCGCCTATTGCTaGGGAGGATGGAACCCCGCGGGGTCGTTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: PAFLAAPTPAYC*GGWNPAGSFWL
Trigger: GAGCCAGAACGACCCCGCGGGGTTCCATCCTCCCAAGCAATAGGCGGGAGTGGGAGCTGCGAGGAAAGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS CAA 90 bp GAAAGGAGAGGCAGCAAGCAGTCCCGTTCCCACCTGCCCTGCTACTaGTGGGCCTCTGCATCCTCGCCCTTGGGTGGGGCTGCCACCGTG +
Preference number: 6 (lower is better)
Translates to: ERRGSKQSRSHLPCY*WASASSPLGGAATV
Trigger: CACGGTGGCAGCCCCACCCAAGGGCGAGGATGCAGAGGCCCACAAGTAGCAGGGCAGGTGGGAACGGGACTGCTTGCTGCCTCTCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
ENST00000650488.1
CDS TCA 72 bp GCGTGGGCCTCATGTCCCCAGGACAGGCCTCGCATGTaGACTCGTCCACCTGGAAGCGGTACCCGTCACAGG +
Preference number: 6 (lower is better)
Translates to: AWASCPQDRPRM*TRPPGSGTRHR
Trigger: CCTGTGACGGGTACCGCTTCCAGGTGGACGAGTTCACATGCGAGGCCTGTCCTGGGGACATGAGGCCCACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000518082.1
ENST00000650031.1
CDS TCA 72 bp CCACCTGGGGCTCGGTCTGCACACTCACATCCAGTCTaGGGGTCTCTGCCCACTGGCCCACTGCCTGGTACC +
Preference number: 6 (lower is better)
Translates to: PPGARSAHSHPV*GSLPTGPLPGT
Trigger: GGTACCAGGCAGTGGGCCAGTGGGCAGAGACCCTCAGACTGGATGTGAGTGTGCAGACCGAGCCCCAGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518082.1
CDS TCA 72 bp GGCTGCGCCAGCCGCTGTCGGTTCAGGACAAGTCTGTaGCAGATGCGGCCGAGGCCAACACCCTGCAGTCGA +
Preference number: 6 (lower is better)
Translates to: GCASRCRFRTSL*QMRPRPTPCSR
Trigger: TCGACTGCAGGGTGTTGGCCTCGGCCGCATCTGTCACAGACTTGTCCTGAACCGACAGCGGCTGGCGCAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS GCA 72 bp CCACAGGAAGTGGCCGGTCAGGTTGGCCTGGCGAGCTaGCTCCAGGACCCGCCTGATGTCATCCTCATTGGC +
Preference number: 6 (lower is better)
Translates to: PQEVAGQVGLAS*LQDPPDVILIG
Trigger: GCCAATGAGGATGACATCAGGCGGGTCCTGGAGGCAGCTCGCCAGGCCAACCTGACCGGCCACTTCCTGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS GCA 72 bp GGCAGGGGTGGAGCTGGAATCCAGCCTGCATGCCAGTaGCATGCCGAGCACCTGGAGCAGGGCCATGTGATC +
Preference number: 6 (lower is better)
Translates to: GRGGAGIQPACQ*HAEHLEQGHVI
Trigger: GATCACATGGCCCTGCTCCAGGTGCTCGGCATGGCACTGGCATGCAGGCTGGATTCCAGCTCCACCCCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS GCA 72 bp ATTGGGGGCAGGGGTGGAGCTGGAATCCAGCCTGCATaGCAGTGCCATGCCGAGCACCTGGAGCAGGGCCAT +
Preference number: 6 (lower is better)
Translates to: IGGRGGAGIQPA*QCHAEHLEQGH
Trigger: ATGGCCCTGCTCCAGGTGCTCGGCATGGCACTGGCATGCAGGCTGGATTCCAGCTCCACCCCTGCCCCCAAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS CAA 72 bp CCCACTGCCTGGTACCCGCCACTGCTGGCACTGCCATaGGTCGCCTGGTACTGGAAGATGTCGTACCGCCCG +
Preference number: 6 (lower is better)
Translates to: PTAWYPPLLALP*VAWYWKMSYRP
Trigger: CGGGCGGTACGACATCTTCCAGTACCAGGCGACCAATGGCAGTGCCAGCAGTGGCGGGTACCAGGCAGTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000518082.1
ENST00000650031.1
CDS GCA 72 bp TCTCTGCCCACTGGCCCACTGCCTGGTACCCGCCACTaGTGGCACTGCCATTGGTCGCCTGGTACTGGAAGA +
Preference number: 6 (lower is better)
Translates to: SLPTGPLPGTRH*WHCHWSPGTGR
Trigger: TCTTCCAGTACCAGGCGACCAATGGCAGTGCCAGCAGTGGCGGGTACCAGGCAGTGGGCCAGTGGGCAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000518082.1
ENST00000650031.1
CDS GCA 72 bp AGGAGAGGCAGCAAGCAGTCCCGTTCCCACCTGCCCTaGTACTTGTGGGCCTCTGCATCCTCGCCCTTGGGT +
Preference number: 6 (lower is better)
Translates to: RRGSKQSRSHLP*YLWASASSPLG
Trigger: ACCCAAGGGCGAGGATGCAGAGGCCCACAAGTAGCAGGGCAGGTGGGAACGGGACTGCTTGCTGCCTCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
ENST00000650488.1
CDS GCA 72 bp CTCGGTCTGCACACTCACATCCAGTCTGAGGGTCTCTaGCCACTGGCCCACTGCCTGGTACCCGCCACTGCT +
Preference number: 6 (lower is better)
Translates to: LGLHTHIQSEGL*PLAHCLVPATA
Trigger: AGCAGTGGCGGGTACCAGGCAGTGGGCCAGTGGGCAGAGACCCTCAGACTGGATGTGAGTGTGCAGACCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518082.1
CDS GCA 72 bp GGGTGGAGCTGGAATCCAGCCTGCATGCCAGTGCCATaGCGAGCACCTGGAGCAGGGCCATGTGATCCTGCT +
Preference number: 6 (lower is better)
Translates to: GWSWNPACMPVP*RAPGAGPCDPA
Trigger: AGCAGGATCACATGGCCCTGCTCCAGGTGCTCGGCATGGCACTGGCATGCAGGCTGGATTCCAGCTCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS CCA 72 bp TGGTACCCGCCACTGCTGGCACTGCCATTGGTCGCCTaGTACTGGAAGATGTCGTACCGCCCGGGCGCATCT +
Preference number: 6 (lower is better)
Translates to: WYPPLLALPLVA*YWKMSYRPGAS
Trigger: AGATGCGCCCGGGCGGTACGACATCTTCCAGTACCAGGCGACCAATGGCAGTGCCAGCAGTGGCGGGTACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000518082.1
ENST00000650031.1
CDS CCA 72 bp CTGCCCACTGGCCCACTGCCTGGTACCCGCCACTGCTaGCACTGCCATTGGTCGCCTGGTACTGGAAGATGT +
Preference number: 6 (lower is better)
Translates to: LPTGPLPGTRHC*HCHWSPGTGRC
Trigger: ACATCTTCCAGTACCAGGCGACCAATGGCAGTGCCAGCAGTGGCGGGTACCAGGCAGTGGGCCAGTGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000518082.1
ENST00000650031.1
CDS CCA 72 bp TCCCCAGGACAGGCCTCGCATGTGAACTCGTCCACCTaGAAGCGGTACCCGTCACAGGCCTCGCAGTGCCAA +
Preference number: 6 (lower is better)
Translates to: SPGQASHVNSST*KRYPSQASQCQ
Trigger: TTGGCACTGCGAGGCCTGTGACGGGTACCGCTTCCAGGTGGACGAGTTCACATGCGAGGCCTGTCCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000518082.1
ENST00000650031.1
CDS CCA 72 bp TGCACACTCACATCCAGTCTGAGGGTCTCTGCCCACTaGCCCACTGCCTGGTACCCGCCACTGCTGGCACTG +
Preference number: 6 (lower is better)
Translates to: CTLTSSLRVSAH*PTAWYPPLLAL
Trigger: CAGTGCCAGCAGTGGCGGGTACCAGGCAGTGGGCCAGTGGGCAGAGACCCTCAGACTGGATGTGAGTGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518082.1
CDS CCA 72 bp TGTACGAGAGCGCCTGATTGGGGGCAGGGGTGGAGCTaGAATCCAGCCTGCATGCCAGTGCCATGCCGAGCA +
Preference number: 6 (lower is better)
Translates to: CTRAPDWGQGWS*NPACMPVPCRA
Trigger: TGCTCGGCATGGCACTGGCATGCAGGCTGGATTCCAGCTCCACCCCTGCCCCCAATCAGGCGCTCTCGTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS CAA 90 bp TCTGCATCCTCGCCCTTGGGTGGGGCTGCCACCGTGGAGGTGGCCTaGAGGCTCCGCTTTCGCTTCTGCACATTCTGCTCTGGATGGAAG +
Preference number: 6 (lower is better)
Translates to: SASSPLGGAATVEVA*RLRFRFCTFCSGWK
Trigger: CTTCCATCCAGAGCAGAATGTGCAGAAGCGAAAGCGGAGCCTCAAGGCCACCTCCACGGTGGCAGCCCCACCCAAGGGCGAGGATGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
ENST00000650488.1
CDS GCA 72 bp ACTGGCCCACTGCCTGGTACCCGCCACTGCTGGCACTaGCATTGGTCGCCTGGTACTGGAAGATGTCGTACC +
Preference number: 6 (lower is better)
Translates to: TGPLPGTRHCWH*HWSPGTGRCRT
Trigger: GGTACGACATCTTCCAGTACCAGGCGACCAATGGCAGTGCCAGCAGTGGCGGGTACCAGGCAGTGGGCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000518082.1
ENST00000650031.1
CDS GCA 72 bp TCCACCTGGAAGCGGTACCCGTCACAGGCCTCGCAGTaGCAACAGCAGGGGACGCCCTTCACCATCTTCTTC +
Preference number: 6 (lower is better)
Translates to: STWKRYPSQASQ*QQQGTPFTIFF
Trigger: GAAGAAGATGGTGAAGGGCGTCCCCTGCTGTTGGCACTGCGAGGCCTGTGACGGGTACCGCTTCCAGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000518082.1
ENST00000650031.1
CDS GCA 72 bp GGCCGGGCCCCCAGCCATGCTATCATCCCCACCACCTaGAGGAGCCAACACTGCATCAGACACAGCACTTTC +
Preference number: 6 (lower is better)
Translates to: GRAPSHAIIPTT*RSQHCIRHSTF
Trigger: GAAAGTGCTGTGTCTGATGCAGTGTTGGCTCCTGCAGGTGGTGGGGATGATAGCATGGCTGGGGGCCCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS CCA 72 bp CAGCTCGAATGTACTGCAGAAGCATCCGCCCATCAGTaGGTTCCATCGCCGGGCACAGGCCTGTGTGCCCAG +
Preference number: 6 (lower is better)
Translates to: QLECTAEASAHQ*VPSPGTGLCAQ
Trigger: CTGGGCACACAGGCCTGTGCCCGGCGATGGAACCCACTGATGGGCGGATGCTTCTGCAGTACATTCGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS CCA 72 bp CTCGCAGCTCCCACTCCCGCCTATTGCTTGGGAGGATaGAACCCCGCGGGGTCGTTCTGGCTCCGTATAAAG +
Preference number: 6 (lower is better)
Translates to: LAAPTPAYCLGG*NPAGSFWLRIK
Trigger: CTTTATACGGAGCCAGAACGACCCCGCGGGGTTCCATCCTCCCAAGCAATAGGCGGGAGTGGGAGCTGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS TCA 72 bp CAAATCCGTCGATGGAGGCCCTTTTGGGCAGGATGGTaGTGGCCCCAACGGCCACGTCCTCCAGGCTCAAGA +
Preference number: 6 (lower is better)
Translates to: QIRRWRPFWAGW*WPQRPRPPGSR
Trigger: TCTTGAGCCTGGAGGACGTGGCCGTTGGGGCCATCACCATCCTGCCCAAAAGGGCCTCCATCGACGGATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS TCA 72 bp GCCAGTGCCATGCCGAGCACCTGGAGCAGGGCCATGTaGTCCTGCTGGAAGGGATGCTTTGCAGTCATCTGC +
Preference number: 6 (lower is better)
Translates to: ASAMPSTWSRAM*SCWKGCFAVIC
Trigger: GCAGATGACTGCAAAGCATCCCTTCCAGCAGGATCACATGGCCCTGCTCCAGGTGCTCGGCATGGCACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS TCA 72 bp CACGTTCGTGCTGGTTGTTCACTGTACGAGAGCGCCTaGTTGGGGGCAGGGGTGGAGCTGGAATCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: HVRAGCSLYESA*LGAGVELESSL
Trigger: CAGGCTGGATTCCAGCTCCACCCCTGCCCCCAATCAGGCGCTCTCGTACAGTGAACAACCAGCACGAACGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS TCA 72 bp AAGGAGCACTCAGTGGGGAGGAGCAGGAATGGGAGCTaGTGCCGAGGAGTACTGGAGTCTGTGCAGGCCCTC +
Preference number: 6 (lower is better)
Translates to: KEHSVGRSRNGS*CRGVLESVQAL
Trigger: GAGGGCCTGCACAGACTCCAGTACTCCTCGGCATCAGCTCCCATTCCTGCTCCTCCCCACTGAGTGCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS GCA 72 bp AGCCAAGGAAAGCTGGGGAACAGGAACGAAGCCACCTaGATAAAGGCGGGACCCTGGAAGGGCTGCCCCACA +
Preference number: 6 (lower is better)
Translates to: SQGKLGNRNEAT*IKAGPWKGCPT
Trigger: TGTGGGGCAGCCCTTCCAGGGTCCCGCCTTTATGCAGGTGGCTTCGTTCCTGTTCCCCAGCTTTCCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS GCA 72 bp CCAGCCGCTGTCGGTTCAGGACAAGTCTGTGACAGATaGGGCCGAGGCCAACACCCTGCAGTCGAGAAACAG +
Preference number: 6 (lower is better)
Translates to: PAAVGSGQVCDR*GRGQHPAVEKQ
Trigger: CTGTTTCTCGACTGCAGGGTGTTGGCCTCGGCCGCATCTGTCACAGACTTGTCCTGAACCGACAGCGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS GCA 72 bp CCTGCGCTGCCATTGAAGCGGACAGCTCGAATGTACTaGAGAAGCATCCGCCCATCAGTGGGTTCCATCGCC +
Preference number: 6 (lower is better)
Translates to: PALPLKRTARMY*RSIRPSVGSIA
Trigger: GGCGATGGAACCCACTGATGGGCGGATGCTTCTGCAGTACATTCGAGCTGTCCGCTTCAATGGCAGCGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS GCA 72 bp GAAGCCACCTGCATAAAGGCGGGACCCTGGAAGGGCTaGCCCACACGTTCGTGCTGGTTGTTCACTGTACGA +
Preference number: 6 (lower is better)
Translates to: EATCIKAGPWKG*PTRSCWLFTVR
Trigger: TCGTACAGTGAACAACCAGCACGAACGTGTGGGGCAGCCCTTCCAGGGTCCCGCCTTTATGCAGGTGGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS CCA 72 bp TCTGGCCTATGGAGGGGATGCTCCACCTCTTCGTGGTaGCTCTCAGGAGCACTCAGTGGAGAAGAGGGGATG +
Preference number: 6 (lower is better)
Translates to: SGLWRGCSTSSW*LSGALSGEEGM
Trigger: CATCCCCTCTTCTCCACTGAGTGCTCCTGAGAGCCACCACGAAGAGGTGGAGCATCCCCTCCATAGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS CCA 72 bp TATTGCTTGGGAGGATGGAACCCCGCGGGGTCGTTCTaGCTCCGTATAAAGTCTCCTCGGGCTCTGGGTCTG +
Preference number: 6 (lower is better)
Translates to: YCLGGWNPAGSF*LRIKSPRALGL
Trigger: CAGACCCAGAGCCCGAGGAGACTTTATACGGAGCCAGAACGACCCCGCGGGGTTCCATCCTCCCAAGCAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS GCA 72 bp GGAATGGGAGCTGATGCCGAGGAGTACTGGAGTCTGTaGAGGCCCTCACAGGGAGGAGATGGAGTTACCACT +
Preference number: 6 (lower is better)
Translates to: GMGADAEEYWSL*RPSQGGDGVTT
Trigger: AGTGGTAACTCCATCTCCTCCCTGTGAGGGCCTGCACAGACTCCAGTACTCCTCGGCATCAGCTCCCATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS GCA 72 bp CAGCCCTCGAGGAGTGAGTTGAGTTGCCCAAGTGCATaGAGCTGGCATGTGTGGGCATCAGGATTCACACCC +
Preference number: 6 (lower is better)
Translates to: QPSRSELSCPSA*SWHVWASGFTP
Trigger: GGGTGTGAATCCTGATGCCCACACATGCCAGCTGCATGCACTTGGGCAACTCAACTCACTCCTCGAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS CCA 72 bp GCAGCTGCGGAGAAGGGCTGTGCCGCCCGTATATGTTaGCAACATCAGTGCAGTGTGCATAAGGGGCAGCTT +
Preference number: 6 (lower is better)
Translates to: AAAEKGCAARIC*QHQCSVHKGQL
Trigger: AAGCTGCCCCTTATGCACACTGCACTGATGTTGCCAACATATACGGGCGGCACAGCCCTTCTCCGCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS CAA 72 bp ATGAAGTACTGGTCAAATCCGTCGATGGAGGCCCTTTaGGGCAGGATGGTGATGGCCCCAACGGCCACGTCC +
Preference number: 6 (lower is better)
Translates to: MKYWSNPSMEAL*GRMVMAPTATS
Trigger: GGACGTGGCCGTTGGGGCCATCACCATCCTGCCCAAAAGGGCCTCCATCGACGGATTTGACCAGTACTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS GCA 72 bp GCAGTCGAGAAACAGCCCTCGAGGAGTGAGTTGAGTTaGCCAAGTGCATGCAGCTGGCATGTGTGGGCATCA +
Preference number: 6 (lower is better)
Translates to: AVEKQPSRSELS*PSACSWHVWAS
Trigger: TGATGCCCACACATGCCAGCTGCATGCACTTGGGCAACTCAACTCACTCCTCGAGGGCTGTTTCTCGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS CAA 72 bp GGAGCAGGGCCATGTGATCCTGCTGGAAGGGATGCTTaGCAGTCATCTGCCCACCCAGAAGCAGCAGCTTTT +
Preference number: 6 (lower is better)
Translates to: GAGPCDPAGRDA*QSSAHPEAAAF
Trigger: AAAAGCTGCTGCTTCTGGGTGGGCAGATGACTGCAAAGCATCCCTTCCAGCAGGATCACATGGCCCTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS CAA 90 bp ATGATGCCCCGGGCGTTGGGCGTCTCCATGAGTCTCCTGATCACCTaGCTGAACTCTCCTGGCTTTGGTTCCCTGGGAATCTTGATAGAC +
Preference number: 6 (lower is better)
Translates to: MMPRALGVSMSLLIT*LNSPGFGSLGILID
Trigger: GTCTATCAAGATTCCCAGGGAACCAAAGCCAGGAGAGTTCAGCAAGGTGATCAGGAGACTCATGGAGACGCCCAACGCCCGGGGCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS GCA 72 bp AAGGGCTGTGCCGCCCGTATATGTTGGCAACATCAGTaGAGTGTGCATAAGGGGCAGCTTGGTGTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: KGCAARICWQHQ*SVHKGQLGVLF
Trigger: GAAGAGGACACCAAGCTGCCCCTTATGCACACTGCACTGATGTTGCCAACATATACGGGCGGCACAGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS CCA 72 bp ATGCCATTTACTGCGCCCCTTCAAGGTAGATGGATGTaGCCGGAAGCTCTGGAACTGAGGCCCTACTCGCAT +
Preference number: 6 (lower is better)
Translates to: MPFTAPLQGRWM*PEALELRPYSH
Trigger: ATGCGAGTAGGGCCTCAGTTCCAGAGCTTCCGGCCACATCCATCTACCTTGAAGGGGCGCAGTAAATGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS GCA 72 bp GTGCCGCCCGTATATGTTGGCAACATCAGTGCAGTGTaGATAAGGGGCAGCTTGGTGTCCTCTTCCTGCATT +
Preference number: 6 (lower is better)
Translates to: VPPVYVGNISAV*IRGSLVSSSCI
Trigger: AATGCAGGAAGAGGACACCAAGCTGCCCCTTATGCACACTGCACTGATGTTGCCAACATATACGGGCGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS CCA 72 bp TTACCAATGCCATTTACTGCGCCCCTTCAAGGTAGATaGATGTGGCCGGAAGCTCTGGAACTGAGGCCCTAC +
Preference number: 6 (lower is better)
Translates to: LPMPFTAPLQGR*MWPEALELRPY
Trigger: GTAGGGCCTCAGTTCCAGAGCTTCCGGCCACATCCATCTACCTTGAAGGGGCGCAGTAAATGGCATTGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS TCA 72 bp CATGTGTGGGCATCAGGATTCACACCCAGAATGGCATaGAACAAACAGCCCACACTGCCTTGGATGGAGGGA +
Preference number: 6 (lower is better)
Translates to: HVWASGFTPRMA*NKQPTLPWMEG
Trigger: TCCCTCCATCCAAGGCAGTGTGGGCTGTTTGTTTCATGCCATTCTGGGTGTGAATCCTGATGCCCACACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650031.1
CDS CCA 72 bp TCCTCGCCTGTGCATTTGCGGGTGGAATCGTCTGACTaGGTACCTGAGCTGGTCAGTTTGCAGTTAAAATTC +
Preference number: 6 (lower is better)
Translates to: SSPVHLRVESSD*VPELVSLQLKF
Trigger: GAATTTTAACTGCAAACTGACCAGCTCAGGTACCCAGTCAGACGATTCCACCCGCAAATGCACAGGCGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231188.9
ENST00000517717.3
ENST00000650031.1
CDS CAA 72 bp GTTGGCAACATCAGTGCAGTGTGCATAAGGGGCAGCTaGGTGTCCTCTTCCTGCATTCTAGCCATTACCAAT +
Preference number: 6 (lower is better)
Translates to: VGNISAVCIRGS*VSSSCILAITN
Trigger: ATTGGTAATGGCTAGAATGCAGGAAGAGGACACCAAGCTGCCCCTTATGCACACTGCACTGATGTTGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS CAA 90 bp CCCGTATATGTTGGCAACATCAGTGCAGTGTGCATAAGGGGCAGCTaGGTGTCCTCTTCCTGCATTCTAGCCATTACCAATGCCATTTAC +
Preference number: 6 (lower is better)
Translates to: PVYVGNISAVCIRGS*VSSSCILAITNAIY
Trigger: GTAAATGGCATTGGTAATGGCTAGAATGCAGGAAGAGGACACCAAGCTGCCCCTTATGCACACTGCACTGATGTTGCCAACATATACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS GCA 72 bp CTTGGTGTCCTCTTCCTGCATTCTAGCCATTACCAATaGCATTTACTGCGCCCCTTCAAGGTAGATGGATGT +
Preference number: 6 (lower is better)
Translates to: LGVLFLHSSHYQ*HLLRPFKVDGC
Trigger: ACATCCATCTACCTTGAAGGGGCGCAGTAAATGGCATTGGTAATGGCTAGAATGCAGGAAGAGGACACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650488.1
CDS CAA 90 bp TCTATCCAACTGGTCAGTTTCTTCTTATCAGAGCCTTATTCCTTCTaGGTTCCTATCCCTTACATTTCTTCAGCCTTTTCTCCACAGGGT +
Preference number: 6 (lower is better)
Translates to: SIQLVSFFLSEPYSF*VPIPYISSAFSPQG
Trigger: ACCCTGTGGAGAAAAGGCTGAAGAAATGTAAGGGATAGGAACCAAGAAGGAATAAGGCTCTGATAAGAAGAAACTGACCAGTTGGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650488.1