RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRM5 (Homo sapiens)

Ensembl gene IDs: ENSG00000168959

Ensembl transcript IDs: ENST00000305432.9, ENST00000305447.4, ENST00000305447.5, ENST00000455756.6

Found 433 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACACGCACTGCTTCCCTAGAGCAAAGCACTTGGTATGGAACTGTTTaGAGAGACGCCTTGTCAGCCCTCAAAGATATCAGCCGTGTTTCT +
Preference number: 1 (lower is better)
Translates to: TRTASLEQSTWYGTV*RDALSALKDISRVS
Trigger: AGAAACACGGCTGATATCTTTGAGGGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTGCTTTGCTCTAGGGAAGCAGTGCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR CCA 90 bp ACGCTGTTTCACACGCACTGCTTCCCTAGAGCAAAGCACTTGGTATaGAACTGTTTGAAGAGACGCCTTGTCAGCCCTCAAAGATATCAG +
Preference number: 1 (lower is better)
Translates to: TLFHTHCFPRAKHLV*NCLKRRLVSPQRYQ
Trigger: CTGATATCTTTGAGGGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTGCTTTGCTCTAGGGAAGCAGTGCGTGTGAAACAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR TCA 90 bp CTTCTTTCCATCCTGGGACATATCTCTCATTTAGGGTCACTTTGCTaGGCCTTAGCATATCCCCTTCCTTTTAGTCATGCTGGTCCCGAC +
Preference number: 1 (lower is better)
Translates to: LLSILGHISHLGSLC*ALAYPLPFSHAGPD
Trigger: GTCGGGACCAGCATGACTAAAAGGAAGGGGATATGCTAAGGCTCAGCAAAGTGACCCTAAATGAGAGATATGTCCCAGGATGGAAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR GCA 90 bp CTACGTAGTACATTAGCGCAGCACTCACTATCCAGTAGTGTGTTATaGATGGGACACATTCACAACGCCTCCGTAAATACTGGACCCAAG +
Preference number: 1 (lower is better)
Translates to: LRSTLAQHSLSSSVL*MGHIHNASVNTGPK
Trigger: CTTGGGTCCAGTATTTACGGAGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGCTAATGTACTACGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR CCA 90 bp TCAACAACAGTCTCTCAAATCATGACAATGTCTTCATGGGGTCTATaGACCACTCTTCCAGTGGTGGGACTCGAAAAGAACAAAGGAGCT +
Preference number: 1 (lower is better)
Translates to: STTVSQIMTMSSWGL*TTLPVVGLEKNKGA
Trigger: AGCTCCTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCCATAGACCCCATGAAGACATTGTCATGATTTGAGAGACTGTTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR GCA 90 bp TTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGAATCCCCGATaGAGGCTTTTGGAAGAGTATTTCACAACCCAATTGGAGAGGAAA +
Preference number: 1 (lower is better)
Translates to: LVNGGESEISRWNPR*RLLEEYFTTQLERK
Trigger: TTTCCTCTCCAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTCAGATTCACCTCCATTAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR CCA 90 bp CAAAATGGAAGGATGAGTGGACTGCTTAGATTAGTCAGTATAACTTaGTTAAACCACGTCTTCTTCTTTCCATCCTGGGACATATCTCTC +
Preference number: 1 (lower is better)
Translates to: QNGRMSGLLRLVSIT*LNHVFFFPSWDISL
Trigger: GAGAGATATGTCCCAGGATGGAAAGAAGAAGACGTGGTTTAACCAAGTTATACTGACTAATCTAAGCAGTCCACTCATCCTTCCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR GCA 90 bp TGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCCCTAGAGCAAAGCCAGGCGACTATGCTTaGCATTGTGTGTGTGTGAAC +
Preference number: 2 (lower is better)
Translates to: CSSPSVTLFHTHCFPRAKPGDYA*HCVCVN
Trigger: GTTCACACACACACAATGGCAAGCATAGTCGCCTGG...CTTTGCTCTAGGGAAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR GCA 90 bp TGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCCCTAGAGCAAAGGTAACCAGGCGACTATaGTTGCCATTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: CSSPSVTLFHTHCFPRAKVTRRL*LPLCVC
Trigger: ACACACACACAATGGCAAGCATAGTCGCCTGGTTAC...CTTTGCTCTAGGGAAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR GCA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTGTTTCCATTAAGGGGTaGCCTTGGCATCTTCCCCCT +
Preference number: 2 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPVSIKG*PWHLPP
Trigger: AGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAAC...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR CCA 90 bp CACTTGGTATGGAACTGTTTGAAGAGACGCCTTGTCAGCCCTCAAAGATATCAGTTGGCATCTTCCCCCTaGGCCGTAACCAGGCGACTA +
Preference number: 2 (lower is better)
Translates to: HLVWNCLKRRLVSPQRYQLASSP*AVTRRL
Trigger: TAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAA...CTGATATCTTTGAGGGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR CCA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTTTGGCATCTTCCCCCTaGGCCGTAACCAGGCGACTA +
Preference number: 2 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLLASSP*AVTRRL
Trigger: TAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAA...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR CAA 90 bp CACACGCACTGCTTCCCTAGAGCAAAGCACTTGGTATGGAACTGTTaGAAGAGACGCCTTGTCAGCCCTCAAAGATATCAGCCGTGTTTC +
Preference number: 2 (lower is better)
Translates to: HTHCFPRAKHLVWNC*KRRLVSPQRYQPCF
Trigger: GAAACACGGCTGATATCTTTGAGGGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTGCTTTGCTCTAGGGAAGCAGTGCGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR CAA 90 bp TCCGTTACGCTGTTTCACACGCACTGCTTCCCTAGAGCAAAGCACTaGGTATGGAACTGTTTGAAGAGACGCCTTGTCAGCCCTCAAAGA +
Preference number: 2 (lower is better)
Translates to: SVTLFHTHCFPRAKH*VWNCLKRRLVSPQR
Trigger: TCTTTGAGGGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTGCTTTGCTCTAGGGAAGCAGTGCGTGTGAAACAGCGTAACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR GCA 90 bp CACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCCGTACCAGGCGACTATGCTTaGCATTGTGTGTGTGTGAAC +
Preference number: 2 (lower is better)
Translates to: HSLSSSVLCMGHIHNASVPGDYA*HCVCVN
Trigger: GTTCACACACACACAATGGCAAGCATAGTCGCCTGG...TACGGAGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR TCA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTTGGTATGGAACTGTTTaGAGAGACGCCTTGTCAGCC +
Preference number: 2 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLWYGTV*RDALSA
Trigger: GGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCA...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR GCA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCGTTTCCATTAAGGGGTaGCCTTGGCATCTTCCCCCT +
Preference number: 2 (lower is better)
Translates to: LQLLINYALHPPLRCFTRVSIKG*PWHLPP
Trigger: AGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAAC...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR TCA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCTTCGTCGGTTGTCATaGGATAGCACTACTGATCTC +
Preference number: 2 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLLRRLS*DSTTDL
Trigger: GAGATCAGTAGTGCTATCTCATGACAACCGACGAAG...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR TCA 90 bp CACTTGGTATGGAACTGTTTGAAGAGACGCCTTGTCAGCCCTCAAAGATATCAGCTTCGTCGGTTGTCATaGGATAGCACTACTGATCTC +
Preference number: 2 (lower is better)
Translates to: HLVWNCLKRRLVSPQRYQLRRLS*DSTTDL
Trigger: GAGATCAGTAGTGCTATCTCATGACAACCGACGAAG...CTGATATCTTTGAGGGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR TCA 90 bp GAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCTGGTATGGAACTGTTTaGAGAGACGCCTTGTCAGCC +
Preference number: 2 (lower is better)
Translates to: EISRWNPRCRLLEEYFTTWYGTV*RDALSA
Trigger: GGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCA...GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR TCA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTACATTCATGTTTGGTaGATCAAAGACTCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNAYIHVW*IKDSSG
Trigger: CCCAGAAGAGTCTTTGATTCACCAAACATGAATGTA...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR GCA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCGTAACCAGGCGACTATaGTTGCCATTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: LQLLINYALHPPLRCFTRVTRRL*LPLCVC
Trigger: ACACACACACAATGGCAAGCATAGTCGCCTGGTTAC...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR CCA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTAGCAAAGCACTTGGTATaGAACTGTTTGAAGAGACGC +
Preference number: 2 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLAKHLV*NCLKRR
Trigger: GCGTCTCTTCAAACAGTTCCATACCAAGTGCTTTGC...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR CAA 90 bp GGAGGTGAATCTGAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTaGGAAGAGTATTTCACAACCCAATTGGAGAGGAAAATCTCTGGT +
Preference number: 2 (lower is better)
Translates to: GGESEISRWNPRCRL*EEYFTTQLERKISG
Trigger: ACCAGAGATTTTCCTCTCCAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTCAGATTCACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR GCA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTATCCAGTAGTGTGTTATaGATGGGACACATTCACAAC +
Preference number: 2 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLSSSVL*MGHIHN
Trigger: GTTGTGAATGTGTCCCATGCATAACACACTACTGGA...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR TCA 90 bp ATGAGTGGACTGCTTAGATTAGTCAGTATAACTTGGTTAAACCACGTCTTCTTCTGGTATGGAACTGTTTaGAGAGACGCCTTGTCAGCC +
Preference number: 2 (lower is better)
Translates to: MSGLLRLVSITWLNHVFFWYGTV*RDALSA
Trigger: GGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCA...GAAGAAGACGTGGTTTAACCAAGTTATACTGACTAATCTAAGCAGTCCACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR GCA 90 bp GAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCTGGACCCAAGTTACTaGTTTTCAAGGTCTTTACAG +
Preference number: 2 (lower is better)
Translates to: EISRWNPRCRLLEEYFTTLDPSY*FSRSLQ
Trigger: CTGTAAAGACCTTGAAAAGCAGTAACTTGGGTCCAG...GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR TCA 90 bp AATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCAATTGGAGAGGAAATACATTCATGTTTGGTaGATCAAAGACTCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: NPRCRLLEEYFTTQLERKYIHVW*IKDSSG
Trigger: CCCAGAAGAGTCTTTGATTCACCAAACATGAATGTA...TTTCCTCTCCAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR TCA 90 bp TTCCATCCTGGGACATATCTCTCATTTAGGGTCACTTTGCTGAGCCTTAGCATATCAACTGGTCTAGAGTaGAACGTATTGTACTTGAGA +
Preference number: 2 (lower is better)
Translates to: FHPGTYLSFRVTLLSLSISTGLE*NVLYLR
Trigger: TCTCAAGTACAATACGTTTCACTCTAGACCAGTTGA...TATGCTAAGGCTCAGCAAAGTGACCCTAAATGAGAGATATGTCCCAGGATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR TCA 90 bp ATGAGTGGACTGCTTAGATTAGTCAGTATAACTTGGTTAAACCACGTCTTCTTCTTAGGGTCACTTTGCTaGGCCTTAGCATATCCCCTT +
Preference number: 2 (lower is better)
Translates to: MSGLLRLVSITWLNHVFFLGSLC*ALAYPL
Trigger: AAGGGGATATGCTAAGGCTCAGCAAAGTGACCCTAA...GAAGAAGACGTGGTTTAACCAAGTTATACTGACTAATCTAAGCAGTCCACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR GCA 90 bp CAGCAGAGCTATTATACAATTCATTTACAGTCAGAAATAGCTCCTAGTCTTCCTCCAGGCGACTATGCTTaGCATTGTGTGTGTGTGAAC +
Preference number: 2 (lower is better)
Translates to: QQSYYTIHLQSEIAPSLPPGDYA*HCVCVN
Trigger: GTTCACACACACACAATGGCAAGCATAGTCGCCTGG...AGGAAGACTAGGAGCTATTTCTGACTGTAAATGAATTGTATAATAGCTCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR CCA 90 bp TGGCTTGGAAGTCACAGAACTGCAGCAGAGCTATTATACAATTCATTTACAGTCGCAAAGCACTTGGTATaGAACTGTTTGAAGAGACGC +
Preference number: 2 (lower is better)
Translates to: WLGSHRTAAELLYNSFTVAKHLV*NCLKRR
Trigger: GCGTCTCTTCAAACAGTTCCATACCAAGTGCTTTGC...GACTGTAAATGAATTGTATAATAGCTCTGCTGCAGTTCTGTGACTTCCAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR CCA 90 bp TGGCTTGGAAGTCACAGAACTGCAGCAGAGCTATTATACAATTCATTTACAGTCGTAGTGTGTTATGCATaGGACACATTCACAACGCCT +
Preference number: 2 (lower is better)
Translates to: WLGSHRTAAELLYNSFTVVVCYA*DTFTTP
Trigger: AGGCGTTGTGAATGTGTCCCATGCATAACACACTAC...GACTGTAAATGAATTGTATAATAGCTCTGCTGCAGTTCTGTGACTTCCAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR CCA 90 bp TATAACTTGGTTAAACCACGTCTTCTTCTTTCCATCCTGGGACATATCTCTCATCCACTCTTCCAGTGGTaGGACTCGAAAAGAACAAAG +
Preference number: 2 (lower is better)
Translates to: YNLVKPRLLLSILGHISHPLFQW*DSKRTK
Trigger: CTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGG...ATGAGAGATATGTCCCAGGATGGAAAGAAGAAGACGTGGTTTAACCAAGTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR CAA 90 bp TGGCAATGCAAACGCAACAGCATTCCTAAAGAGTGGCCATGTTTCTaGAAAGAGATAGCCAGGCTGGAGCTCAAGAATGATTTTTATAAA +
Preference number: 2 (lower is better)
Translates to: WQCKRNSIPKEWPCF*KEIARLELKNDFYK
Trigger: TTTATAAAAATCATTCTTGAGCTCCAGCCTGGCTATCTCTTTCAAGAAACATGGCCACTCTTTAGGAATGCTGTTGCGTTTGCATTGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR CCA 90 bp TTCCATCCTGGGACATATCTCTCATTTAGGGTCACTTTGCTGAGCCTTAGCATAATTTCACAACCCAATTaGAGAGGAAAATCTCTGGTA +
Preference number: 2 (lower is better)
Translates to: FHPGTYLSFRVTLLSLSIISQPN*RGKSLV
Trigger: TACCAGAGATTTTCCTCTCCAATTGGGTTGTGAAAT...TATGCTAAGGCTCAGCAAAGTGACCCTAAATGAGAGATATGTCCCAGGATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR CCA 90 bp AGTCAAGATAGGAATCCTCAGGTGAATGCCATCCTTTTGATGAGGATCCAAAGGTACTCCAGTATTGATTaGCAACATGGTGAAATAGTC +
Preference number: 2 (lower is better)
Translates to: SQDRNPQVNAILLMRIQRYSSID*QHGEIV
Trigger: GACTATTTCACCATGTTGCCAATCAATACTGGAGTA...CCTTTGGATCCTCATCAAAAGGATGGCATTCACCTGAGGATTCCTATCTTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR CCA 90 bp AGAATTGCTTTGCCTCTTTTTGGAATGGCTAAGAAAGACTGTGTGGTTAATATTTCTTCATGGGGTCTATaGACCACTCTTCCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: RIALPLFGMAKKDCVVNISSWGL*TTLPVV
Trigger: CACCACTGGAAGAGTGGTCCATAGACCCCATGAAGA...AATATTAACCACACAGTCTTTCTTAGCCATTCCAAAAAGAGGCAAAGCAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR CCA 90 bp TGGCTTGGAAGTCACAGAACTGCAGCAGAGCTATTATACAATTCATTTACAGTCTTCCACTGGTTTTCTTaGTTAATGGAGGTGAATCTG +
Preference number: 2 (lower is better)
Translates to: WLGSHRTAAELLYNSFTVFHWFS*LMEVNL
Trigger: CAGATTCACCTCCATTAACCAAGAAAACCAGTGGAA...GACTGTAAATGAATTGTATAATAGCTCTGCTGCAGTTCTGTGACTTCCAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR CAA 90 bp TACCTAAGAAGTCAAGATAGGAATCCTCAGGTGAATGCCATCCTTTaGATGAGGATCCAAAGGGTATTAACACCTCAAAAGATTTCCATT +
Preference number: 2 (lower is better)
Translates to: YLRSQDRNPQVNAIL*MRIQRVLTPQKISI
Trigger: AATGGAAATCTTTTGAGGTGTTAATACCCTTTGGATCCTCATCAAAAGGATGGCATTCACCTGAGGATTCCTATCTTGACTTCTTAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR GCA 90 bp AGTTATTACTTGGAACCTGGTATTAGAATTGGCAAAGAGACAGAGTTAGCATCAGAATCCTCAGGTGAATaGCATCCTTTTGATGAGGAT +
Preference number: 2 (lower is better)
Translates to: SYYLEPGIRIGKETELASESSGE*HPFDED
Trigger: ATCCTCATCAAAAGGATGGCATTCACCTGAGGATTC...TGATGCTAACTCTGTCTCTTTGCCAATTCTAATACCAGGTTCCAAGTAATAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR TCA 90 bp AGTTATTACTTGGAACCTGGTATTAGAATTGGCAAAGAGACAGAGTTAGCATCAAGTGGATTCAGGTCTTaGACTATGAATTCTACCTAT +
Preference number: 2 (lower is better)
Translates to: SYYLEPGIRIGKETELASSGFRS*TMNSTY
Trigger: ATAGGTAGAATTCATAGTTCAAGACCTGAATCCACT...TGATGCTAACTCTGTCTCTTTGCCAATTCTAATACCAGGTTCCAAGTAATAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR CAA 90 bp GGTAACTATAGAGATTCTGACAGCTTGAGGGTTATTAATAAGCTGTaGCTAAATGTGAACTCACATAATACCTTTGAAGTCTCCAAAACA +
Preference number: 2 (lower is better)
Translates to: GNYRDSDSLRVINKL*LNVNSHNTFEVSKT
Trigger: TGTTTTGGAGACTTCAAAGGTATTATGTGAGTTCACATTTAGCAACAGCTTATTAATAACCCTCAAGCTGTCAGAATCTCTATAGTTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR CCA 90 bp CAGCAGAGCTATTATACAATTCATTTACAGTCAGAAATAGCTCCTAGTCTTCCTGATTATGATAGCATGTaGAAGTATCAGATGGCAATT +
Preference number: 2 (lower is better)
Translates to: QQSYYTIHLQSEIAPSLPDYDSM*KYQMAI
Trigger: AATTGCCATCTGATACTTCCACATGCTATCATAATC...AGGAAGACTAGGAGCTATTTCTGACTGTAAATGAATTGTATAATAGCTCTGCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR CAA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCACCAGGCGACTATGCTaGCCATTGTGTGTGTGTGAA +
Preference number: 3 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGTRRLC*PLCVCE
Trigger: TTCACACACACACAATGGCAAGCATAGTCGCCTGGT...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR CCA 72 bp CACACGCACTGCTTCCCTAGAGCAAAGCACTTGGTATaGAACTGTTTGAAGAGACGCCTTGTCAGCCCTCAA +
Preference number: 3 (lower is better)
Translates to: HTHCFPRAKHLV*NCLKRRLVSPQ
Trigger: TTGAGGGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTGCTTTGCTCTAGGGAAGCAGTGCGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR CAA 90 bp TGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCCCTAGAGCAAAGAATCTGCCAAAAGATTaGTCGTCGGTTTCTTCGTCG +
Preference number: 3 (lower is better)
Translates to: CSSPSVTLFHTHCFPRAKNLPKD*SSVSSS
Trigger: CGACGAAGAAACCGACGACAAATCTTTTGGCAGATT...CTTTGCTCTAGGGAAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR CAA 90 bp TGGGGTCTATGGACCACTCTTCCAGTGGTGGGACTCGAAAAGAACAAAGGAGCTAATCTGCCAAAAGATTaGTCGTCGGTTTCTTCGTCG +
Preference number: 3 (lower is better)
Translates to: WGLWTTLPVVGLEKNKGANLPKD*SSVSSS
Trigger: CGACGAAGAAACCGACGACAAATCTTTTGGCAGATT...AGCTCCTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCCATAGACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR CAA 90 bp TGGGGTCTATGGACCACTCTTCCAGTGGTGGGACTCGAAAAGAACAAAGGAGCTCCTAGAGCAAAGCACTaGGTATGGAACTGTTTGAAG +
Preference number: 3 (lower is better)
Translates to: WGLWTTLPVVGLEKNKGAPRAKH*VWNCLK
Trigger: CTTCAAACAGTTCCATACCAAGTGCTTTGCTCTAGG...AGCTCCTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCCATAGACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR CCA 72 bp CAATGTCTTCATGGGGTCTATGGACCACTCTTCCAGTaGTGGGACTCGAAAAGAACAAAGGAGCTCTTTGTG +
Preference number: 3 (lower is better)
Translates to: QCLHGVYGPLFQ*WDSKRTKELFV
Trigger: CACAAAGAGCTCCTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCCATAGACCCCATGAAGACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR CAA 90 bp TTAGCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACACCAGGCGACTATGCTaGCCATTGTGTGTGTGTGAA +
Preference number: 3 (lower is better)
Translates to: LAQHSLSSSVLCMGHIHNTRRLC*PLCVCE
Trigger: TTCACACACACACAATGGCAAGCATAGTCGCCTGGT...GTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR CAA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTATTGGTATGGAACTGTTaGAAGAGACGCCTTGTCAGC +
Preference number: 3 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLLVWNC*KRRLVS
Trigger: GCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAA...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR CAA 90 bp TGGGGTCTATGGACCACTCTTCCAGTGGTGGGACTCGAAAAGAACAAAGGAGCTTATTTCACAACCCAATaGGAGAGGAAAATCTCTGGT +
Preference number: 3 (lower is better)
Translates to: WGLWTTLPVVGLEKNKGAYFTTQ*ERKISG
Trigger: ACCAGAGATTTTCCTCTCCAATTGGGTTGTGAAATA...AGCTCCTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCCATAGACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR CAA 90 bp TGGGGTCTATGGACCACTCTTCCAGTGGTGGGACTCGAAAAGAACAAAGGAGCTTTTGCTACTCCAGTATaGATTGGCAACATGGTGAAA +
Preference number: 3 (lower is better)
Translates to: WGLWTTLPVVGLEKNKGAFATPV*IGNMVK
Trigger: TTTCACCATGTTGCCAATCAATACTGGAGTAGCAAA...AGCTCCTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCCATAGACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR CCA 72 bp AGTTGGCAATGCAAACGCAACAGCATTCCTAAAGAGTaGCCATGTTTCTTGAAAGAGATAGCCAGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: SWQCKRNSIPKE*PCFLKEIARLE
Trigger: CTCCAGCCTGGCTATCTCTTTCAAGAAACATGGCCACTCTTTAGGAATGCTGTTGCGTTTGCATTGCCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR CCA 72 bp GTCTCTCAAATCATGACAATGTCTTCATGGGGTCTATaGACCACTCTTCCAGTGGTGGGACTCGAAAAGAAC +
Preference number: 3 (lower is better)
Translates to: VSQIMTMSSWGL*TTLPVVGLEKN
Trigger: GTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCCATAGACCCCATGAAGACATTGTCATGATTTGAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR CAA 90 bp GAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCTTGGTATGGAACTGTTaGAAGAGACGCCTTGTCAGC +
Preference number: 3 (lower is better)
Translates to: EISRWNPRCRLLEEYFTTLVWNC*KRRLVS
Trigger: GCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAA...GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR CAA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCTTGGTATGGAACTGTTaGAAGAGACGCCTTGTCAGC +
Preference number: 3 (lower is better)
Translates to: LQLLINYALHPPLRCFTRLVWNC*KRRLVS
Trigger: GCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAA...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR GCA 72 bp ACATTAGCGCAGCACTCACTATCCAGTAGTGTGTTATaGATGGGACACATTCACAACGCCTCCGTAAATACT +
Preference number: 3 (lower is better)
Translates to: TLAQHSLSSSVL*MGHIHNASVNT
Trigger: AGTATTTACGGAGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGCTAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR TCA 72 bp ATCCTGGGACATATCTCTCATTTAGGGTCACTTTGCTaGGCCTTAGCATATCCCCTTCCTTTTAGTCATGCT +
Preference number: 3 (lower is better)
Translates to: ILGHISHLGSLC*ALAYPLPFSHA
Trigger: AGCATGACTAAAAGGAAGGGGATATGCTAAGGCTCAGCAAAGTGACCCTAAATGAGAGATATGTCCCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR GCA 72 bp GGAGGTGAATCTGAAATAAGTAGGTGGAATCCCCGATaGAGGCTTTTGGAAGAGTATTTCACAACCCAATTG +
Preference number: 3 (lower is better)
Translates to: GGESEISRWNPR*RLLEEYFTTQL
Trigger: CAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTCAGATTCACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR-3UTR CAA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGCCCCGATGCAGGCTTTaGGAAGAGTATTTCACAACC +
Preference number: 3 (lower is better)
Translates to: NLPLVFLVNGGESEISRWPRCRL*EEYFTT
Trigger: GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGG...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR TCA 72 bp CAAAAGATTTGTCGTCGGTTTCTTCGTCGGTTGTCATaGGATAGCACTACTGATCTCGTGTTTCCATTAAGG +
Preference number: 3 (lower is better)
Translates to: QKICRRFLRRLS*DSTTDLVFPLR
Trigger: CCTTAATGGAAACACGAGATCAGTAGTGCTATCTCATGACAACCGACGAAGAAACCGACGACAAATCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
3UTR CCA 72 bp AGGATGAGTGGACTGCTTAGATTAGTCAGTATAACTTaGTTAAACCACGTCTTCTTCTTTCCATCCTGGGAC +
Preference number: 3 (lower is better)
Translates to: RMSGLLRLVSIT*LNHVFFFPSWD
Trigger: GTCCCAGGATGGAAAGAAGAAGACGTGGTTTAACCAAGTTATACTGACTAATCTAAGCAGTCCACTCATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR CAA 90 bp CAGCAGAGCTATTATACAATTCATTTACAGTCAGAAATAGCTCCTAGTCTTCCTACCAGGCGACTATGCTaGCCATTGTGTGTGTGTGAA +
Preference number: 3 (lower is better)
Translates to: QQSYYTIHLQSEIAPSLPTRRLC*PLCVCE
Trigger: TTCACACACACACAATGGCAAGCATAGTCGCCTGGT...AGGAAGACTAGGAGCTATTTCTGACTGTAAATGAATTGTATAATAGCTCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR CAA 90 bp AGTTATTACTTGGAACCTGGTATTAGAATTGGCAAAGAGACAGAGTTAGCATCACCCCGATGCAGGCTTTaGGAAGAGTATTTCACAACC +
Preference number: 3 (lower is better)
Translates to: SYYLEPGIRIGKETELASPRCRL*EEYFTT
Trigger: GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGG...TGATGCTAACTCTGTCTCTTTGCCAATTCTAATACCAGGTTCCAAGTAATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR-3UTR CAA 90 bp TATAACTTGGTTAAACCACGTCTTCTTCTTTCCATCCTGGGACATATCTCTCATGTGAATGCCATCCTTTaGATGAGGATCCAAAGGGTA +
Preference number: 3 (lower is better)
Translates to: YNLVKPRLLLSILGHISHVNAIL*MRIQRV
Trigger: TACCCTTTGGATCCTCATCAAAAGGATGGCATTCAC...ATGAGAGATATGTCCCAGGATGGAAAGAAGAAGACGTGGTTTAACCAAGTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR TCA 72 bp TCACTGCTCACTGGCATAGCTAAATCTCCACTAAGCTaGCTTGACACAGTTAAAATTTTCAGTGTATTAAGA +
Preference number: 3 (lower is better)
Translates to: SLLTGIAKSPLS*LDTVKIFSVLR
Trigger: TCTTAATACACTGAAAATTTTAACTGTGTCAAGTCAGCTTAGTGGAGATTTAGCTATGCCAGTGAGCAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR CCA 72 bp AATATTCAGTTCTCTTTGTACTGTAGAGTTATTACTTaGAACCTGGTATTAGAATTGGCAAAGAGACAGAGT +
Preference number: 3 (lower is better)
Translates to: NIQFSLYCRVIT*NLVLELAKRQS
Trigger: ACTCTGTCTCTTTGCCAATTCTAATACCAGGTTCCAAGTAATAACTCTACAGTACAAAGAGAACTGAATATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTGCCGAGCCCGCGCGGTaGCTCAGCGTGCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCAEPAR*LSVLMG
Trigger: GCCCATCAGCACGCTGAGCCACCGCGCGGGCTCGGC...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTAGCCCTGCGAGGAGCTaGTGCGCGCCACAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCSPARS*CAPQAP
Trigger: CGGAGCCTGTGGCGCGCAGCAGCTCCTCGCAGGGCT...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCGCACATCGTCGTCCGTaGGGCTGGCCGAGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNAAHRRP*GWPSPR
Trigger: GCGCGGGCTCGGCCAGCCGCACGGACGACGATGTGC...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TGGGGTCTATGGACCACTCTTCCAGTGGTGGGACTCGAAAAGAACAAAGGAGCTGCACATCGTCGTCCGTaGGGCTGGCCGAGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: WGLWTTLPVVGLEKNKGAAHRRP*GWPSPR
Trigger: GCGCGGGCTCGGCCAGCCGCACGGACGACGATGTGC...AGCTCCTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCCATAGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCAGGGGGACGGCGGGGTaGGAGCCACCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNARGTAG*EPPAPP
Trigger: TGGAGGAGCTGGTGGCTCTCACCCCGCCGTCCCCCT...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp GACGGTTCTTCCCAATCCAGATATGTTCTTCTTAGGCTGCCCCCACTCCTTTCCCCTCCAGGTCTGGCTTaGCGGCCGCAGCCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: DGSSQSRYVLLRLPPLLSPPGLA*RPQPRD
Trigger: GTCCCGAGGCTGCGGCCGCCAAGCCAGACCTGGAGG...GGAAAGGAGTGGGGGCAGCCTAAGAAGAACATATCTGGATTGGGAAGAACCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTGGTGGCTCAGCGTGCTaGTGGGCGACGGTGAGCGCG +
Preference number: 4 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPGGSAC*WATVSA
Trigger: CGCGCTCACCGTCGCCCATCAGCACGCTGAGCCACC...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTGCTGCGCGCCTCCCGTaGCTTCGATGGCCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPAARLP*LRWPAE
Trigger: CTCTGCCGGCCATCGAAGTCACGGGAGGCGCGCAGC...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCCCTAGAGCAAAGCGCTGCCACAGGTGCTaGCCCCGGCTGCTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: CSSPSVTLFHTHCFPRAKRCHRC*PRLLFS
Trigger: TGAGAAGAGCAGCCGGGGGCAGCACCTGTGGCAGCG...CTTTGCTCTAGGGAAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCCATCATACAGCGCCTTaGGGCCGGCGTCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGHHTAP*GRRLGT
Trigger: AGTCCCCAGACGCCGGCCCCAAGGCGCTGTATGATG...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp GACGGTTCTTCCCAATCCAGATATGTTCTTCTTAGGCTGCCCCCACTCCTTTCCCAGCTCCTCCAGGTCTaGCTTGGCGGCCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: DGSSQSRYVLLRLPPLLSQLLQV*LGGRSL
Trigger: GAGGCTGCGGCCGCCAAGCCAGACCTGGAGGAGCTG...GGAAAGGAGTGGGGGCAGCCTAAGAAGAACATATCTGGATTGGGAAGAACCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCGCCACAGGCTCCGAGTaGAGCGACGGCACATCGTCG +
Preference number: 4 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNAATGSE*SDGTSS
Trigger: CGACGATGTGCCGTCGCTGCACTCGGAGCCTGTGGC...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp TGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCCCTAGAGCAAAGCGGACACTGGCGAGTTaGGGGTTGTGCTCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: CSSPSVTLFHTHCFPRAKRTLAS*GLCSPS
Trigger: ACTCGGGGAGCACAACCCCCAACTCGCCAGTGTCCG...CTTTGCTCTAGGGAAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTAGGTGGCTCAGCGTGCTaGTGGGCGACGGTGAGCGCG +
Preference number: 4 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLGGSAC*WATVSA
Trigger: CGCGCTCACCGTCGCCCATCAGCACGCTGAGCCACC...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp CACTTGGTATGGAACTGTTTGAAGAGACGCCTTGTCAGCCCTCAAAGATATCAGGCTGCGCGCCTCCCGTaGCTTCGATGGCCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: HLVWNCLKRRLVSPQRYQAARLP*LRWPAE
Trigger: CTCTGCCGGCCATCGAAGTCACGGGAGGCGCGCAGC...CTGATATCTTTGAGGGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTGGCAAACACCACAGCTaGAATGGGTTCAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCGKHHS*NGFRVT
Trigger: GGTGACCCTGAACCCATTGCAGCTGTGGTGTTTGCC...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCCCTTCGGCACAAACATaGAGCCTAGGGCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGPSAQT*SLGPLW
Trigger: CCACAGTGGCCCTAGGCTGCATGTTTGTGCCGAAGG...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCCTAGGCTGCTGGATCTaGTGGCTGCGGAGGATGACT +
Preference number: 4 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGLGCWI*WLRRMT
Trigger: AGTCATCCTCCGCAGCCAGCAGATCCAGCAGCCTAG...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTGGTGCTGCCCCCGGCTaGTCTTCTCATTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPGAAPG*SSHSGP
Trigger: GGGCCCAGAATGAGAAGAGCAGCCGGGGGCAGCACC...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTACCTCCAGGTCTGGCTTaGCGGCCGCAGCCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLPPGLA*RPQPRD
Trigger: GTCCCGAGGCTGCGGCCGCCAAGCCAGACCTGGAGG...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCGCTGGCTGCGGAGGATaGCTTGCCATCCCCTACATG +
Preference number: 4 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNAAGCGG*LAIPYM
Trigger: CATGTAGGGGATGGCAAGTCATCCTCCGCAGCCAGC...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTAGGCGCTGCCACAGGTaGTGCCCCCGGCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLRRCHR*CPRLLF
Trigger: GAAGAGCAGCCGGGGGCAGCACCTGTGGCAGCGCCT...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCAGCCCTGCGAGGAGCTaGTGCGCGCCACAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: LQLLINYALHPPLRCFTRSPARS*CAPQAP
Trigger: CGGAGCCTGTGGCGCGCAGCAGCTCCTCGCAGGGCT...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp TGGGGTCTATGGACCACTCTTCCAGTGGTGGGACTCGAAAAGAACAAAGGAGCTGGCTGCTGGATCTGCTaGCTGCGGAGGATGACTTGC +
Preference number: 4 (lower is better)
Translates to: WGLWTTLPVVGLEKNKGAGCWIC*LRRMTC
Trigger: GCAAGTCATCCTCCGCAGCCAGCAGATCCAGCAGCC...AGCTCCTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCCATAGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCCAGCCCAGCCATCACTaGCCAGAAGCAGAAATTCTC +
Preference number: 4 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGQPSHH*PEAEIL
Trigger: GAGAATTTCTGCTTCTGGGCAGTGATGGCTGGGCTG...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCCTAGGCTGCTGGATCTaGTGGCTGCGGAGGATGACT +
Preference number: 4 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNALGCWI*WLRRMT
Trigger: AGTCATCCTCCGCAGCCAGCAGATCCAGCAGCCTAG...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TTCCATCCTGGGACATATCTCTCATTTAGGGTCACTTTGCTGAGCCTTAGCATAAGGCGCTGCCACAGGTaGTGCCCCCGGCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: FHPGTYLSFRVTLLSLSIRRCHR*CPRLLF
Trigger: GAAGAGCAGCCGGGGGCAGCACCTGTGGCAGCGCCT...TATGCTAAGGCTCAGCAAAGTGACCCTAAATGAGAGATATGTCCCAGGATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCTGGATGGACAGGCGCTaGCACAGGTGCTGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: LQLLINYALHPPLRCFTRWMDRR*HRCCPR
Trigger: CCGGGGGCAGCACCTGTGGCAGCGCCTGTCCATCCA...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTGCCACAGGCTCCGAGTaGAGCGACGGCACATCGTCG +
Preference number: 4 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLATGSE*SDGTSS
Trigger: CGACGATGTGCCGTCGCTGCACTCGGAGCCTGTGGC...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp AATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCAATTGGAGAGGAAACCTGCGAGGAGCTGCTaGGCGCCACAGGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: NPRCRLLEEYFTTQLERKPARSC*APQAPS
Trigger: ACTCGGAGCCTGTGGCGCGCAGCAGCTCCTCGCAGG...TTTCCTCTCCAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTACGCGCAGGCCGGCGTaGTTTCCAGGGACATTCACA +
Preference number: 4 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPTRRPA*FPGTFT
Trigger: TGTGAATGTCCCTGGAAAGCACGCCGGCCTGCGCGT...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTCCAGGCGACTATGCTTaGCATTGTGTGTGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCPGDYA*HCVCVN
Trigger: GTTCACACACACACAATGGCAAGCATAGTCGCCTGG...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTCTGCTCTTCTCATTCTaGGCCCACGTGACGGATTTT +
Preference number: 4 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCLLFSF*AHVTDF
Trigger: AAAATCCGTCACGTGGGCCCAGAATGAGAAGAGCAG...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp CACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCCGTACATCATACAGCGCCTTaGGGCCGGCGTCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: HSLSSSVLCMGHIHNASVHHTAP*GRRLGT
Trigger: AGTCCCCAGACGCCGGCCCCAAGGCGCTGTATGATG...TACGGAGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp AATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCAATTGGAGAGGAAACAGCTCCTCCAGGTCTaGCTTGGCGGCCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: NPRCRLLEEYFTTQLERKQLLQV*LGGRSL
Trigger: GAGGCTGCGGCCGCCAAGCCAGACCTGGAGGAGCTG...TTTCCTCTCCAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTTGCTGCCAAAATTCTTaGAACCAAGGGTTTCGGTGG +
Preference number: 4 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCCCQNS*NQGFRW
Trigger: CCACCGAAACCCTTGGTTTCAAGAATTTTGGCAGCA...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCCCTTCCAGTCGGCACTaGAAACGATGCTGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGPSSRH*KRCCQN
Trigger: ATTTTGGCAGCATCGTTTTCAGTGCCGACTGGAAGG...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTAGGTCGTGTACATTGTaGAGGCGATATACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCRSCTL*RRYTWP
Trigger: AGGCCAAGTATATCGCCTTCACAATGTACACGACCT...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp AATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCAATTGGAGAGGAAACGCTGCCACAGGTGCTaGCCCCGGCTGCTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: NPRCRLLEEYFTTQLERKRCHRC*PRLLFS
Trigger: TGAGAAGAGCAGCCGGGGGCAGCACCTGTGGCAGCG...TTTCCTCTCCAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTGTAACCAGGCGACTATaGTTGCCATTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCVTRRL*LPLCVC
Trigger: ACACACACACAATGGCAAGCATAGTCGCCTGGTTAC...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCCCTAGAGCAAAGGTTTCCATTAAGGGGTaGCCTTGGCATCTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: CSSPSVTLFHTHCFPRAKVSIKG*PWHLPP
Trigger: AGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAAC...CTTTGCTCTAGGGAAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCGAGTCCTGCATAGCCTaGGCAGAGGGACATCTGCAT +
Preference number: 4 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNAESCIA*AEGHLH
Trigger: ATGCAGATGTCCCTCTGCCCAGGCTATGCAGGACTC...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp CACTTGGTATGGAACTGTTTGAAGAGACGCCTTGTCAGCCCTCAAAGATATCAGCGGACACTGGCGAGTTaGGGGTTGTGCTCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: HLVWNCLKRRLVSPQRYQRTLAS*GLCSPS
Trigger: ACTCGGGGAGCACAACCCCCAACTCGCCAGTGTCCG...CTGATATCTTTGAGGGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCGAACATTTCTGGTCTTaGACGCATAGAAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGEHFWS*THRRCS
Trigger: GCTGCACCTTCTATGCGTTCAAGACCAGAAATGTTC...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp TTAGCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCTGGCTGCGGAGGATaGCTTGCCATCCCCTACATG +
Preference number: 4 (lower is better)
Translates to: LAQHSLSSSVLCMGHIHNAGCGG*LAIPYM
Trigger: CATGTAGGGGATGGCAAGTCATCCTCCGCAGCCAGC...GTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGAGGGGGACGGCGGGGTaGGAGCCACCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: NLPLVFLVNGGESEISRWRGTAG*EPPAPP
Trigger: TGGAGGAGCTGGTGGCTCTCACCCCGCCGTCCCCCT...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCATGCTGGTCCCGACTaGATTATCACTGGGCACCAG +
Preference number: 4 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPHAGPD*IITGHQ
Trigger: CTGGTGCCCAGTGATAATTCAGTCGGGACCAGCATG...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTTGCCATCCCCTACATaGATGCGCACCACGGTAGAT +
Preference number: 4 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNALPSPT*MRTTVD
Trigger: ATCTACCGTGGTGCGCATGCATGTAGGGGATGGCAA...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TGGCTTGGAAGTCACAGAACTGCAGCAGAGCTATTATACAATTCATTTACAGTCTGGATGGACAGGCGCTaGCACAGGTGCTGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: WLGSHRTAAELLYNSFTVWMDRR*HRCCPR
Trigger: CCGGGGGCAGCACCTGTGGCAGCGCCTGTCCATCCA...GACTGTAAATGAATTGTATAATAGCTCTGCTGCAGTTCTGTGACTTCCAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCGCGAGTTGGGGGTTGTaGTCCCCGAGTCCACCGAGT +
Preference number: 4 (lower is better)
Translates to: LQLLINYALHPPLRCFTRASWGL*SPSPPS
Trigger: ACTCGGTGGACTCGGGGAGCACAACCCCCAACTCGC...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp TGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCCCTAGAGCAAAGGCGCACGTTTCTCTCTaGTTTGGCCAGGATGATGTA +
Preference number: 4 (lower is better)
Translates to: CSSPSVTLFHTHCFPRAKAHVSL*FGQDDV
Trigger: TACATCATCCTGGCCAAACCAGAGAGAAACGTGCGC...CTTTGCTCTAGGGAAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTTTGATGACGGCCGTTTaGTTGGGGTTTTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCLMTAV*LGFSFL
Trigger: CAAGAAAGAAAACCCCAACCAAACGGCCGTCATCAA...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp TGGGGTCTATGGACCACTCTTCCAGTGGTGGGACTCGAAAAGAACAAAGGAGCTATGGTCGTGGGCAACTaGATCTCTTTGGGGATCAGG +
Preference number: 4 (lower is better)
Translates to: WGLWTTLPVVGLEKNKGAMVVGN*ISLGIR
Trigger: CCTGATCCCCAAAGAGATCCAGTTGCCCACGACCAT...AGCTCCTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCCATAGACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCGGCCGACTCGGACACTaGCGAGTTGGGGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LQLLINYALHPPLRCFTRGRLGH*RVGGCA
Trigger: AGCACAACCCCCAACTCGCCAGTGTCCGAGTCGGCC...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp AGTCAAGATAGGAATCCTCAGGTGAATGCCATCCTTTTGATGAGGATCCAAAGGGGCCGACTCGGACACTaGCGAGTTGGGGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SQDRNPQVNAILLMRIQRGRLGH*RVGGCA
Trigger: AGCACAACCCCCAACTCGCCAGTGTCCGAGTCGGCC...CCTTTGGATCCTCATCAAAAGGATGGCATTCACCTGAGGATTCCTATCTTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTGCAAAGCACTTGGTATaGAACTGTTTGAAGAGACGC +
Preference number: 4 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCAKHLV*NCLKRR
Trigger: GCGTCTCTTCAAACAGTTCCATACCAAGTGCTTTGC...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTGTAGTGTGTTATGCATaGGACACATTCACAACGCCT +
Preference number: 4 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCVVCYA*DTFTTP
Trigger: AGGCGTTGTGAATGTGTCCCATGCATAACACACTAC...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp TGGGGTCTATGGACCACTCTTCCAGTGGTGGGACTCGAAAAGAACAAAGGAGCTCCTTCCAGTCGGCACTaGAAACGATGCTGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: WGLWTTLPVVGLEKNKGAPSSRH*KRCCQN
Trigger: ATTTTGGCAGCATCGTTTTCAGTGCCGACTGGAAGG...AGCTCCTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCCATAGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp GACGGTTCTTCCCAATCCAGATATGTTCTTCTTAGGCTGCCCCCACTCCTTTCCAGGTCCAACAACAGCTaGCTTCTCCCTTTCGGATCA +
Preference number: 4 (lower is better)
Translates to: DGSSQSRYVLLRLPPLLSRSNNS*LLPFGS
Trigger: TGATCCGAAAGGGAGAAGTCAGCTGTTGTTGGACCT...GGAAAGGAGTGGGGGCAGCCTAAGAAGAACATATCTGGATTGGGAAGAACCGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCAAGTCACAACCTGTaGGATCATCAGTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNASSHNL*DHQWAK
Trigger: CTTGGCCCACTGATGATCTCACAGGTTGTGACTTGA...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTGGGCACAGGCACTCATaGATCTGGGCTTTTTGGTAC +
Preference number: 4 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPGHRHS*IWAFWY
Trigger: GTACCAAAAAGCCCAGATTCATGAGTGCCTGTGCCC...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTGTATCCAAGTGGAGTaGCAACTCCTAGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNACIQVE*QLLGWW
Trigger: CCACCAACCTAGGAGTTGTCACTCCACTTGGATACA...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TGGGGTCTATGGACCACTCTTCCAGTGGTGGGACTCGAAAAGAACAAAGGAGCTCACTTTCTCCATAGTTaGCTTCTGTGTGCACGGCTG +
Preference number: 4 (lower is better)
Translates to: WGLWTTLPVVGLEKNKGAHFLHS*LLCARL
Trigger: CAGCCGTGCACACAGAAGGCAACTATGGAGAAAGTG...AGCTCCTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCCATAGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCAGACCCCAGTTGGCATaGCTTGCATGTGTACTCATC +
Preference number: 4 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNARPQLA*LACVLI
Trigger: GATGAGTACACATGCAAGGCATGCCAACTGGGGTCT...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TTAGCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACCCTTCGGCACAAACATaGAGCCTAGGGCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: LAQHSLSSSVLCMGHIHNPSAQT*SLGPLW
Trigger: CCACAGTGGCCCTAGGCTGCATGTTTGTGCCGAAGG...GTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp ATGAGTGGACTGCTTAGATTAGTCAGTATAACTTGGTTAAACCACGTCTTCTTCCCTGCGAGGAGCTGCTaGGCGCCACAGGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: MSGLLRLVSITWLNHVFFPARSC*APQAPS
Trigger: ACTCGGAGCCTGTGGCGCGCAGCAGCTCCTCGCAGG...GAAGAAGACGTGGTTTAACCAAGTTATACTGACTAATCTAAGCAGTCCACTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTAACCACACTGCTGATCTaGTCCATGAGGGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLTTLLI*SMREPC
Trigger: GCAGGGCTCCCTCATGGAGCAGATCAGCAGTGTGGT...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCTCGGTGGTTTGTTTCTaGCCGGAGCTTCAGATAATA +
Preference number: 4 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGSVVCF*PELQII
Trigger: TATTATCTGAAGCTCCGGCCAGAAACAAACCACCGA...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp CACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCCGTAGGCCAAGACCCCAGTTaGCATGCCTTGCATGTGTAC +
Preference number: 4 (lower is better)
Translates to: HSLSSSVLCMGHIHNASVGQDPS*HALHVY
Trigger: GTACACATGCAAGGCATGCCAACTGGGGTCTTGGCC...TACGGAGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp GAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCGGCTGCTGGATCTGCTaGCTGCGGAGGATGACTTGC +
Preference number: 4 (lower is better)
Translates to: EISRWNPRCRLLEEYFTTGCWIC*LRRMTC
Trigger: GCAAGTCATCCTCCGCAGCCAGCAGATCCAGCAGCC...GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp AGAATTGCTTTGCCTCTTTTTGGAATGGCTAAGAAAGACTGTGTGGTTAATATTGCCGAGCCCGCGCGGTaGCTCAGCGTGCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: RIALPLFGMAKKDCVVNIAEPAR*LSVLMG
Trigger: GCCCATCAGCACGCTGAGCCACCGCGCGGGCTCGGC...AATATTAACCACACAGTCTTTCTTAGCCATTCCAAAAAGAGGCAAAGCAATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTATGGTCGTGGGCAACTaGATCTCTTTGGGGATCAGG +
Preference number: 4 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPMVVGN*ISLGIR
Trigger: CCTGATCCCCAAAGAGATCCAGTTGCCCACGACCAT...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTATTGGCATCTTCCCCCTaGGCCGTAACCAGGCGACTA +
Preference number: 4 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLLASSP*AVTRRL
Trigger: TAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAA...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp CACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCCGTACTGGTTTGGCCAGGATaGTGTACACCTTCGGCACAA +
Preference number: 4 (lower is better)
Translates to: HSLSSSVLCMGHIHNASVLVWPG*CTPSAQ
Trigger: TTGTGCCGAAGGTGTACATCATCCTGGCCAAACCAG...TACGGAGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTGGCAAACACCACAGCTaGAATGGGTTCAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLGKHHS*NGFRVT
Trigger: GGTGACCCTGAACCCATTGCAGCTGTGGTGTTTGCC...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTGCCAGCCAGGATCCTTaGAATACGGTTGGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPASQDP*NTVGLC
Trigger: ACAAAGACCAACCGTATTGCAAGGATCCTGGCTGGC...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp AATGGAAGGATGAGTGGACTGCTTAGATTAGTCAGTATAACTTGGTTAAACCACGGTGCTGCCCCCGGCTaGTCTTCTCATTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: NGRMSGLLRLVSITWLNHGAAPG*SSHSGP
Trigger: GGGCCCAGAATGAGAAGAGCAGCCGGGGGCAGCACC...GTGGTTTAACCAAGTTATACTGACTAATCTAAGCAGTCCACTCATCCTTCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCATGTTCTTCTTAGGCTaGCCCCACTCCTTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNAMFFLG*PHSFPK
Trigger: TTTGGGAAAGGAGTGGGGGCAGCCTAAGAAGAACAT...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp CACTTGGTATGGAACTGTTTGAAGAGACGCCTTGTCAGCCCTCAAAGATATCAGGAGTCCTGCATAGCCTaGGCAGAGGGACATCTGCAT +
Preference number: 4 (lower is better)
Translates to: HLVWNCLKRRLVSPQRYQESCIA*AEGHLH
Trigger: ATGCAGATGTCCCTCTGCCCAGGCTATGCAGGACTC...CTGATATCTTTGAGGGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCTCGAAGATACTGTACTaGGATCAAGTCACAACCTGT +
Preference number: 4 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGSKILY*DQVTTC
Trigger: ACAGGTTGTGACTTGATCCCAGTACAGTATCTTCGA...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp TGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCCCTAGAGCAAAGTCCTTGCAATACGGTTaGTCTTTGTTACAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CSSPSVTLFHTHCFPRAKSLQYG*SLLQGL
Trigger: CAGCCCTTGTAACAAAGACCAACCGTATTGCAAGGA...CTTTGCTCTAGGGAAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp TGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCCCTAGAGCAAAGCAACTCCTAGGTTGGTaGTGTTACAGATCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: CSSPSVTLFHTHCFPRAKQLLGW*CYRSGR
Trigger: TCTACCTGATCTGTAACACCACCAACCTAGGAGTTG...CTTTGCTCTAGGGAAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTGCGCACGTTTCTCTCTaGTTTGGCCAGGATGATGTA +
Preference number: 4 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPAHVSL*FGQDDV
Trigger: TACATCATCCTGGCCAAACCAGAGAGAAACGTGCGC...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCTGCTCTTCTCATTCTaGGCCCACGTGACGGATTTT +
Preference number: 4 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPLLFSF*AHVTDF
Trigger: AAAATCCGTCACGTGGGCCCAGAATGAGAAGAGCAG...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTACGGCAAAGGTCGTCATaGTCGTGGGCAACTGGATCT +
Preference number: 4 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLRQRSS*SWATGS
Trigger: AGATCCAGTTGCCCACGACCATGACGACCTTTGCCG...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp GAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCATGGCCGGCAGAGGCTaGATTTCGGCAAAGGTCGTC +
Preference number: 4 (lower is better)
Translates to: EISRWNPRCRLLEEYFTTMAGRG*ISAKVV
Trigger: GACGACCTTTGCCGAAATCCAGCCTCTGCCGGCCAT...GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
3UTR CAA 72 bp CTGTTTCACACGCACTGCTTCCCTAGAGCAAAGCACTaGGTATGGAACTGTTTGAAGAGACGCCTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LFHTHCFPRAKH*VWNCLKRRLVS
Trigger: GCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTGCTTTGCTCTAGGGAAGCAGTGCGTGTGAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
CDS-3UTR TCA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCCAACAGCTTCTCGCTaGTATCCATCTGTCACATCA +
Preference number: 4 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPPTASR*YPSVTS
Trigger: TGATGTGACAGATGGATATCAGCGAGAAGCTGTTGG...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp TGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCCCTAGAGCAAAGTCGAATAGATGGCGTTaGTCACAAATCCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: CSSPSVTLFHTHCFPRAKSNRWR*SQIPFW
Trigger: CCAAAATGGGATTTGTGATCAACGCCATCTATTCGA...CTTTGCTCTAGGGAAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp CACTTGGTATGGAACTGTTTGAAGAGACGCCTTGTCAGCCCTCAAAGATATCAGCTGGTTTGGCCAGGATaGTGTACACCTTCGGCACAA +
Preference number: 4 (lower is better)
Translates to: HLVWNCLKRRLVSPQRYQLVWPG*CTPSAQ
Trigger: TTGTGCCGAAGGTGTACATCATCCTGGCCAAACCAG...CTGATATCTTTGAGGGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TGGGGTCTATGGACCACTCTTCCAGTGGTGGGACTCGAAAAGAACAAAGGAGCTCCAGTTGGCATGCCTTaGATGTGTACTCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: WGLWTTLPVVGLEKNKGAPVGMP*MCTHQR
Trigger: TCTTTGATGAGTACACATGCAAGGCATGCCAACTGG...AGCTCCTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCCATAGACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp TTCCATCCTGGGACATATCTCTCATTTAGGGTCACTTTGCTGAGCCTTAGCATACTGCGGAGGATGACTTaGCATCCCCTACATGCATGC +
Preference number: 4 (lower is better)
Translates to: FHPGTYLSFRVTLLSLSILRRMT*HPLHAC
Trigger: GCATGCATGTAGGGGATGGCAAGTCATCCTCCGCAG...TATGCTAAGGCTCAGCAAAGTGACCCTAAATGAGAGATATGTCCCAGGATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp TGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCCCTAGAGCAAAGCTGGACCCAAGTTACTaGTTTTCAAGGTCTTTACAG +
Preference number: 4 (lower is better)
Translates to: CSSPSVTLFHTHCFPRAKLDPSY*FSRSLQ
Trigger: CTGTAAAGACCTTGAAAAGCAGTAACTTGGGTCCAG...CTTTGCTCTAGGGAAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp TTAGCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACAACCAAGGGTTTCGGTaGTTTGTTTCTGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LAQHSLSSSVLCMGHIHNNQGFR*FVSGRS
Trigger: GCTCCGGCCAGAAACAAACCACCGAAACCCTTGGTT...GTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp TGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCCCTAGAGCAAAGGACTTCTCGAATGCTTaGGTAGTCATGCATTATGTC +
Preference number: 4 (lower is better)
Translates to: CSSPSVTLFHTHCFPRAKDFSNA*VVMHYV
Trigger: GACATAATGCATGACTACCCAAGCATTCGAGAAGTC...CTTTGCTCTAGGGAAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTGCAACTGGATCTCTTTaGGGATCAGGTAGGACGAGC +
Preference number: 4 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLATGSL*GSGRTS
Trigger: GCTCGTCCTACCTGATCCCCAAAGAGATCCAGTTGC...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTAAGGTCGTCATGGTCGTaGGCAACTGGATCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLRSSWS*ATGSLW
Trigger: CCAAAGAGATCCAGTTGCCCACGACCATGACGACCT...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCGCAAAGCACTTGGTATaGAACTGTTTGAAGAGACGC +
Preference number: 4 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNAAKHLV*NCLKRR
Trigger: GCGTCTCTTCAAACAGTTCCATACCAAGTGCTTTGC...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCCCGATGCAGGCTTTTaGAAGAGTATTTCACAACCC +
Preference number: 4 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPPDAGF*KSISQP
Trigger: GGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGG...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp TTAGCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACAGGTCCAACAACAGCTaGCTTCTCCCTTTCGGATCA +
Preference number: 4 (lower is better)
Translates to: LAQHSLSSSVLCMGHIHNRSNNS*LLPFGS
Trigger: TGATCCGAAAGGGAGAAGTCAGCTGTTGTTGGACCT...GTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTATCAAGTCACAACCTGTaGGATCATCAGTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLSSHNL*DHQWAK
Trigger: CTTGGCCCACTGATGATCTCACAGGTTGTGACTTGA...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCCCCTGCTTGAGGACTTaGCTACTGGTGTATCACGGT +
Preference number: 4 (lower is better)
Translates to: LQLLINYALHPPLRCFTRPCLRT*LLVYHG
Trigger: ACCGTGATACACCAGTAGTCAAGTCCTCAAGCAGGG...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp AATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCAATTGGAGAGGAAAGCAGAGTTCCCTGCTTaGGGACTTGACTACTGGTGT +
Preference number: 4 (lower is better)
Translates to: NPRCRLLEEYFTTQLERKAEFPA*GLDYWC
Trigger: ACACCAGTAGTCAAGTCCTCAAGCAGGGAACTCTGC...TTTCCTCTCCAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp CACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCCGTAGTTTGGGCTTCGCAATaGGGCAGAAGGTACATAAGT +
Preference number: 4 (lower is better)
Translates to: HSLSSSVLCMGHIHNASVVWASQ*GRRYIS
Trigger: ACTTATGTACCTTCTGCCTCATTGCGAAGCCCAAAC...TACGGAGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp GAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCGGGCACAGGCACTCATaGATCTGGGCTTTTTGGTAC +
Preference number: 4 (lower is better)
Translates to: EISRWNPRCRLLEEYFTTGHRHS*IWAFWY
Trigger: GTACCAAAAAGCCCAGATTCATGAGTGCCTGTGCCC...GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTTGTATCCAAGTGGAGTaGCAACTCCTAGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLCIQVE*QLLGWW
Trigger: CCACCAACCTAGGAGTTGTCACTCCACTTGGATACA...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp AGTCAAGATAGGAATCCTCAGGTGAATGCCATCCTTTTGATGAGGATCCAAAGGTTCTCTTCCACAGGTTaGCTAGGCTGCTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: SQDRNPQVNAILLMRIQRFSSTG*LGCWIC
Trigger: GCAGATCCAGCAGCCTAGTCAACCTGTGGAAGAGAA...CCTTTGGATCCTCATCAAAAGGATGGCATTCACCTGAGGATTCCTATCTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp GAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCATTCTGGGCCCACGTaGCGGATTTTCCATTGGAAC +
Preference number: 4 (lower is better)
Translates to: EISRWNPRCRLLEEYFTTHSGPT*RIFHWN
Trigger: GTTCCAATGGAAAATCCGTCACGTGGGCCCAGAATG...GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCTACCCAAATGAATTGTaGAGTTCATATCCTATAGCC +
Preference number: 4 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGYPNEL*SSYPIA
Trigger: GGCTATAGGATATGAACTTCACAATTCATTTGGGTA...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp AATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCAATTGGAGAGGAAACAGCCCAGCCATCACTaGCCAGAAGCAGAAATTCTC +
Preference number: 4 (lower is better)
Translates to: NPRCRLLEEYFTTQLERKQPSHH*PEAEIL
Trigger: GAGAATTTCTGCTTCTGGGCAGTGATGGCTGGGCTG...TTTCCTCTCCAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TGGGGTCTATGGACCACTCTTCCAGTGGTGGGACTCGAAAAGAACAAAGGAGCTGGTAGACTTCTCGAATaGTTGGGTAGTCATGCATTA +
Preference number: 4 (lower is better)
Translates to: WGLWTTLPVVGLEKNKGAGRLLE*LGSHAL
Trigger: TAATGCATGACTACCCAAGCATTCGAGAAGTCTACC...AGCTCCTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCCATAGACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp AGTTATTACTTGGAACCTGGTATTAGAATTGGCAAAGAGACAGAGTTAGCATCAGCGAGTTGGGGGTTGTaGTCCCCGAGTCCACCGAGT +
Preference number: 4 (lower is better)
Translates to: SYYLEPGIRIGKETELASASWGL*SPSPPS
Trigger: ACTCGGTGGACTCGGGGAGCACAACCCCCAACTCGC...TGATGCTAACTCTGTCTCTTTGCCAATTCTAATACCAGGTTCCAAGTAATAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp AATGGAAGGATGAGTGGACTGCTTAGATTAGTCAGTATAACTTGGTTAAACCACACGCGCAGGCCGGCGTaGTTTCCAGGGACATTCACA +
Preference number: 4 (lower is better)
Translates to: NGRMSGLLRLVSITWLNHTRRPA*FPGTFT
Trigger: TGTGAATGTCCCTGGAAAGCACGCCGGCCTGCGCGT...GTGGTTTAACCAAGTTATACTGACTAATCTAAGCAGTCCACTCATCCTTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp TTCCATCCTGGGACATATCTCTCATTTAGGGTCACTTTGCTGAGCCTTAGCATAGTTTCCATTAAGGGGTaGCCTTGGCATCTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: FHPGTYLSFRVTLLSLSIVSIKG*PWHLPP
Trigger: AGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAAC...TATGCTAAGGCTCAGCAAAGTGACCCTAAATGAGAGATATGTCCCAGGATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTTTTCCGTCCATCAATTaGCTTCATGGCATCACAGAG +
Preference number: 4 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPFPSIN*LHGITE
Trigger: CTCTGTGATGCCATGAAGCCAATTGATGGACGGAAA...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp GACGGTTCTTCCCAATCCAGATATGTTCTTCTTAGGCTGCCCCCACTCCTTTCCTCGAAGATACTGTACTaGGATCAAGTCACAACCTGT +
Preference number: 4 (lower is better)
Translates to: DGSSQSRYVLLRLPPLLSSKILY*DQVTTC
Trigger: ACAGGTTGTGACTTGATCCCAGTACAGTATCTTCGA...GGAAAGGAGTGGGGGCAGCCTAAGAAGAACATATCTGGATTGGGAAGAACCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTATCTTTCTTGTTGATGTaGATGGACAGGCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLSFLLM*MDRRCH
Trigger: GTGGCAGCGCCTGTCCATCCACATCAACAAGAAAGA...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp TGGCTTGGAAGTCACAGAACTGCAGCAGAGCTATTATACAATTCATTTACAGTCATGGCCGGCAGAGGCTaGATTTCGGCAAAGGTCGTC +
Preference number: 4 (lower is better)
Translates to: WLGSHRTAAELLYNSFTVMAGRG*ISAKVV
Trigger: GACGACCTTTGCCGAAATCCAGCCTCTGCCGGCCAT...GACTGTAAATGAATTGTATAATAGCTCTGCTGCAGTTCTGTGACTTCCAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCATTTCACAACCCAATTaGAGAGGAAAATCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGISQPN*RGKSLV
Trigger: TACCAGAGATTTTCCTCTCCAATTGGGTTGTGAAAT...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp GAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCCTTTCGGATCACCTTaGTCTGGCCTTTCTCACATG +
Preference number: 4 (lower is better)
Translates to: EISRWNPRCRLLEEYFTTPFGSP*SGLSHM
Trigger: CATGTGAGAAAGGCCAGATCAAGGTGATCCGAAAGG...GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp CACTTGGTATGGAACTGTTTGAAGAGACGCCTTGTCAGCCCTCAAAGATATCAGAGGTCGTGTACATTGTaGAGGCGATATACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: HLVWNCLKRRLVSPQRYQRSCTL*RRYTWP
Trigger: AGGCCAAGTATATCGCCTTCACAATGTACACGACCT...CTGATATCTTTGAGGGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp TTAGCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGGTTTTCTTTCTTGTTaGTGTGGATGGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LAQHSLSSSVLCMGHIHNGFLSC*CGWTGA
Trigger: AGCGCCTGTCCATCCACATCAACAAGAAAGAAAACC...GTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCTGGTATGGAACTGTTTaGAGAGACGCCTTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LQLLINYALHPPLRCFTRWYGTV*RDALSA
Trigger: GGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCA...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCCACTTTCTCCATAGTTaGCTTCTGTGTGCACGGCTG +
Preference number: 4 (lower is better)
Translates to: LQLLINYALHPPLRCFTRHFLHS*LLCARL
Trigger: CAGCCGTGCACACAGAAGGCAACTATGGAGAAAGTG...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TTCCATCCTGGGACATATCTCTCATTTAGGGTCACTTTGCTGAGCCTTAGCATACTGGGGAGAGACCAATaGCAATTCTCTGAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: FHPGTYLSFRVTLLSLSILGRDQ*QFSEGS
Trigger: GCTACCTTCAGAGAATTGGCATTGGTCTCTCCCCAG...TATGCTAAGGCTCAGCAAAGTGACCCTAAATGAGAGATATGTCCCAGGATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp AGTCAAGATAGGAATCCTCAGGTGAATGCCATCCTTTTGATGAGGATCCAAAGGCCAGGCGACTATGCTTaGCATTGTGTGTGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: SQDRNPQVNAILLMRIQRPGDYA*HCVCVN
Trigger: GTTCACACACACACAATGGCAAGCATAGTCGCCTGG...CCTTTGGATCCTCATCAAAAGGATGGCATTCACCTGAGGATTCCTATCTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTGTAACCAGGCGACTATaGTTGCCATTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLVTRRL*LPLCVC
Trigger: ACACACACACAATGGCAAGCATAGTCGCCTGGTTAC...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTTCCAGTAGTGTGTTATaGATGGGACACATTCACAAC +
Preference number: 4 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPSSSVL*MGHIHN
Trigger: GTTGTGAATGTGTCCCATGCATAACACACTACTGGA...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TTAGCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACAGGTGGAATCCCCGATaGAGGCTTTTGGAAGAGTAT +
Preference number: 4 (lower is better)
Translates to: LAQHSLSSSVLCMGHIHNRWNPR*RLLEEY
Trigger: ATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCT...GTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp CACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCCGTATTGACATCGGGAGATTaGAGCTTGATTGTGATGCCA +
Preference number: 4 (lower is better)
Translates to: HSLSSSVLCMGHIHNASVLTSGD*SLIVMP
Trigger: TGGCATCACAATCAAGCTCCAATCTCCCGATGTCAA...TACGGAGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTTCCACTGGTTTTCTTaGTTAATGGAGGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNAFHWFS*LMEVNL
Trigger: CAGATTCACCTCCATTAACCAAGAAAACCAGTGGAA...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp TGGGGTCTATGGACCACTCTTCCAGTGGTGGGACTCGAAAAGAACAAAGGAGCTTTCCACTGGTTTTCTTaGTTAATGGAGGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: WGLWTTLPVVGLEKNKGAFHWFS*LMEVNL
Trigger: CAGATTCACCTCCATTAACCAAGAAAACCAGTGGAA...AGCTCCTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCCATAGACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCCACTCTTCCAGTGGTaGGACTCGAAAAGAACAAAG +
Preference number: 4 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLPLFQW*DSKRTK
Trigger: CTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGG...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp AATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCAATTGGAGAGGAAAGTTTGGGCTTCGCAATaGGGCAGAAGGTACATAAGT +
Preference number: 4 (lower is better)
Translates to: NPRCRLLEEYFTTQLERKVWASQ*GRRYIS
Trigger: ACTTATGTACCTTCTGCCTCATTGCGAAGCCCAAAC...TTTCCTCTCCAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp TGGCTTGGAAGTCACAGAACTGCAGCAGAGCTATTATACAATTCATTTACAGTCCTTTGTTACAAGGGCTaGGTAGCTCATGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: WLGSHRTAAELLYNSFTVLCYKG*VAHGWG
Trigger: TCCCCAGCCATGAGCTACTCAGCCCTTGTAACAAAG...GACTGTAAATGAATTGTATAATAGCTCTGCTGCAGTTCTGTGACTTCCAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp AGTCAAGATAGGAATCCTCAGGTGAATGCCATCCTTTTGATGAGGATCCAAAGGGAACATTTCTGGTCTTaGACGCATAGAAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SQDRNPQVNAILLMRIQREHFWS*THRRCS
Trigger: GCTGCACCTTCTATGCGTTCAAGACCAGAAATGTTC...CCTTTGGATCCTCATCAAAAGGATGGCATTCACCTGAGGATTCCTATCTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTACCAGTTGGCATGCCTTaGATGTGTACTCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLPVGMP*MCTHQR
Trigger: TCTTTGATGAGTACACATGCAAGGCATGCCAACTGG...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGCTGCGGAGGATGACTTaGCATCCCCTACATGCATGC +
Preference number: 4 (lower is better)
Translates to: NLPLVFLVNGGESEISRWLRRMT*HPLHAC
Trigger: GCATGCATGTAGGGGATGGCAAGTCATCCTCCGCAG...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp CAGCAGAGCTATTATACAATTCATTTACAGTCAGAAATAGCTCCTAGTCTTCCTACCACACTGCTGATCTaGTCCATGAGGGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QQSYYTIHLQSEIAPSLPTTLLI*SMREPC
Trigger: GCAGGGCTCCCTCATGGAGCAGATCAGCAGTGTGGT...AGGAAGACTAGGAGCTATTTCTGACTGTAAATGAATTGTATAATAGCTCTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp CACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCCGTATCCAGTAGTGTGTTATaGATGGGACACATTCACAAC +
Preference number: 4 (lower is better)
Translates to: HSLSSSVLCMGHIHNASVSSSVL*MGHIHN
Trigger: GTTGTGAATGTGTCCCATGCATAACACACTACTGGA...TACGGAGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TGGGGTCTATGGACCACTCTTCCAGTGGTGGGACTCGAAAAGAACAAAGGAGCTTATTTTAGTTGGCAATaGAAACGCAACAGCATTCCT +
Preference number: 4 (lower is better)
Translates to: WGLWTTLPVVGLEKNKGAYFSWQ*KRNSIP
Trigger: AGGAATGCTGTTGCGTTTGCATTGCCAACTAAAATA...AGCTCCTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCCATAGACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCATCAATTGGCTTCATaGCATCACAGAGTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLHQLAS*HHRVLH
Trigger: ATGCAGGACTCTGTGATGCCATGAAGCCAATTGATG...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp TATAACTTGGTTAAACCACGTCTTCTTCTTTCCATCCTGGGACATATCTCTCATGGCCAAGACCCCAGTTaGCATGCCTTGCATGTGTAC +
Preference number: 4 (lower is better)
Translates to: YNLVKPRLLLSILGHISHGQDPS*HALHVY
Trigger: GTACACATGCAAGGCATGCCAACTGGGGTCTTGGCC...ATGAGAGATATGTCCCAGGATGGAAAGAAGAAGACGTGGTTTAACCAAGTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTATTGATGACGGCCGTTTaGTTGGGGTTTTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLLMTAV*LGFSFL
Trigger: CAAGAAAGAAAACCCCAACCAAACGGCCGTCATCAA...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGCGGCAAAGGTCGTCATaGTCGTGGGCAACTGGATCT +
Preference number: 4 (lower is better)
Translates to: NLPLVFLVNGGESEISRWRQRSS*SWATGS
Trigger: AGATCCAGTTGCCCACGACCATGACGACCTTTGCCG...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp CACTTGGTATGGAACTGTTTGAAGAGACGCCTTGTCAGCCCTCAAAGATATCAGCGCCTCCGTAAATACTaGACCCAAGTTACTGCTTTT +
Preference number: 4 (lower is better)
Translates to: HLVWNCLKRRLVSPQRYQRLRKY*TQVTAF
Trigger: AAAAGCAGTAACTTGGGTCCAGTATTTACGGAGGCG...CTGATATCTTTGAGGGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTTCTGAAATAAGTAGGTaGAATCCCCGATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLSEISR*NPRCRL
Trigger: AAGCCTGCATCGGGGATTCCACCTACTTATTTCAGA...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp GAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCCTCGGTGTAATATTTaGGATCAGGGTGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: EISRWNPRCRLLEEYFTTPRCNI*DQGAVM
Trigger: CATCACAGCACCCTGATCCCAAATATTACACCGAGG...GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTTCGAATAGATGGCGTTaGTCACAAATCCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLSNRWR*SQIPFW
Trigger: CCAAAATGGGATTTGTGATCAACGCCATCTATTCGA...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp CTTGGAAGTCACAGAACTGCAGCAGAGCTATTATACAATTCATTTACAGTCAGACCCTGCTTGAGGACTTaGCTACTGGTGTATCACGGT +
Preference number: 4 (lower is better)
Translates to: LGSHRTAAELLYNSFTVRPCLRT*LLVYHG
Trigger: ACCGTGATACACCAGTAGTCAAGTCCTCAAGCAGGG...TCTGACTGTAAATGAATTGTATAATAGCTCTGCTGCAGTTCTGTGACTTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp CTTGGAAGTCACAGAACTGCAGCAGAGCTATTATACAATTCATTTACAGTCAGAGCAGAGTTCCCTGCTTaGGGACTTGACTACTGGTGT +
Preference number: 4 (lower is better)
Translates to: LGSHRTAAELLYNSFTVRAEFPA*GLDYWC
Trigger: ACACCAGTAGTCAAGTCCTCAAGCAGGGAACTCTGC...TCTGACTGTAAATGAATTGTATAATAGCTCTGCTGCAGTTCTGTGACTTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGCTTTGTTACAAGGGCTaGGTAGCTCATGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: NLPLVFLVNGGESEISRWLCYKG*VAHGWG
Trigger: TCCCCAGCCATGAGCTACTCAGCCCTTGTAACAAAG...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGTTCTCTTCCACAGGTTaGCTAGGCTGCTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: NLPLVFLVNGGESEISRWFSSTG*LGCWIC
Trigger: GCAGATCCAGCAGCCTAGTCAACCTGTGGAAGAGAA...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGCATTCTGGGCCCACGTaGCGGATTTTCCATTGGAAC +
Preference number: 4 (lower is better)
Translates to: NLPLVFLVNGGESEISRWHSGPT*RIFHWN
Trigger: GTTCCAATGGAAAATCCGTCACGTGGGCCCAGAATG...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp CACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCCGTATACATTCATGTTTGGTaGATCAAAGACTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: HSLSSSVLCMGHIHNASVYIHVW*IKDSSG
Trigger: CCCAGAAGAGTCTTTGATTCACCAAACATGAATGTA...TACGGAGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCCAGTCTCTCAAATCATaGCAATGTCTTCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: LQLLINYALHPPLRCFTRQSLKS*QCLHGV
Trigger: GACCCCATGAAGACATTGTCATGATTTGAGAGACTG...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTAGTGGATTCAGGTCTTaGACTATGAATTCTACCTAT +
Preference number: 4 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPSGFRS*TMNSTY
Trigger: ATAGGTAGAATTCATAGTTCAAGACCTGAATCCACT...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp CACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCCGTATCAACTGGTCTAGAGTaGAACGTATTGTACTTGAGA +
Preference number: 4 (lower is better)
Translates to: HSLSSSVLCMGHIHNASVSTGLE*NVLYLR
Trigger: TCTCAAGTACAATACGTTTCACTCTAGACCAGTTGA...TACGGAGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp CACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCCGTAAAGTCTTGTTGTATTTaGTGTTCTCCTGTGGAAACC +
Preference number: 4 (lower is better)
Translates to: HSLSSSVLCMGHIHNASVKSCCI*CSPVET
Trigger: GGTTTCCACAGGAGAACAGCAAATACAACAAGACTT...TACGGAGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp TATAACTTGGTTAAACCACGTCTTCTTCTTTCCATCCTGGGACATATCTCTCATTTGCCATCCCCTACATaGATGCGCACCACGGTAGAT +
Preference number: 4 (lower is better)
Translates to: YNLVKPRLLLSILGHISHLPSPT*MRTTVD
Trigger: ATCTACCGTGGTGCGCATGCATGTAGGGGATGGCAA...ATGAGAGATATGTCCCAGGATGGAAAGAAGAAGACGTGGTTTAACCAAGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp CACTTGGTATGGAACTGTTTGAAGAGACGCCTTGTCAGCCCTCAAAGATATCAGCTGGACCCAAGTTACTaGTTTTCAAGGTCTTTACAG +
Preference number: 4 (lower is better)
Translates to: HLVWNCLKRRLVSPQRYQLDPSY*FSRSLQ
Trigger: CTGTAAAGACCTTGAAAAGCAGTAACTTGGGTCCAG...CTGATATCTTTGAGGGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp CACTTGGTATGGAACTGTTTGAAGAGACGCCTTGTCAGCCCTCAAAGATATCAGGAATCCTCAGGTGAATaGCATCCTTTTGATGAGGAT +
Preference number: 4 (lower is better)
Translates to: HLVWNCLKRRLVSPQRYQESSGE*HPFDED
Trigger: ATCCTCATCAAAAGGATGGCATTCACCTGAGGATTC...CTGATATCTTTGAGGGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp AATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCAATTGGAGAGGAAATCGGTGGTTTGTTTCTaGCCGGAGCTTCAGATAATA +
Preference number: 4 (lower is better)
Translates to: NPRCRLLEEYFTTQLERKSVVCF*PELQII
Trigger: TATTATCTGAAGCTCCGGCCAGAAACAAACCACCGA...TTTCCTCTCCAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp GAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCATCAATTGGCTTCATaGCATCACAGAGTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: EISRWNPRCRLLEEYFTTHQLAS*HHRVLH
Trigger: ATGCAGGACTCTGTGATGCCATGAAGCCAATTGATG...GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCAAAGCAATCACTAGCTaGGCACAGGCACTCATGAAT +
Preference number: 4 (lower is better)
Translates to: LQLLINYALHPPLRCFTRKAITS*AQALMN
Trigger: ATTCATGAGTGCCTGTGCCCAGCTAGTGATTGCTTT...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp AGTCAAGATAGGAATCCTCAGGTGAATGCCATCCTTTTGATGAGGATCCAAAGGCAACTCCTAGGTTGGTaGTGTTACAGATCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SQDRNPQVNAILLMRIQRQLLGW*CYRSGR
Trigger: TCTACCTGATCTGTAACACCACCAACCTAGGAGTTG...CCTTTGGATCCTCATCAAAAGGATGGCATTCACCTGAGGATTCCTATCTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp AATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCAATTGGAGAGGAAACGCCTCCGTAAATACTaGACCCAAGTTACTGCTTTT +
Preference number: 4 (lower is better)
Translates to: NPRCRLLEEYFTTQLERKRLRKY*TQVTAF
Trigger: AAAAGCAGTAACTTGGGTCCAGTATTTACGGAGGCG...TTTCCTCTCCAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp GAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCTCTGAAATAAGTAGGTaGAATCCCCGATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: EISRWNPRCRLLEEYFTTSEISR*NPRCRL
Trigger: AAGCCTGCATCGGGGATTCCACCTACTTATTTCAGA...GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp TGGCTTGGAAGTCACAGAACTGCAGCAGAGCTATTATACAATTCATTTACAGTCTCTTCATGGGGTCTATaGACCACTCTTCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: WLGSHRTAAELLYNSFTVSSWGL*TTLPVV
Trigger: CACCACTGGAAGAGTGGTCCATAGACCCCATGAAGA...GACTGTAAATGAATTGTATAATAGCTCTGCTGCAGTTCTGTGACTTCCAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp GAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCACTCCTTTCCCAAAATaGAAGGATGAGTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: EISRWNPRCRLLEEYFTTTPFPK*KDEWTA
Trigger: AGCAGTCCACTCATCCTTCCATTTTGGGAAAGGAGT...GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR CAA 72 bp AAACGCAACAGCATTCCTAAAGAGTGGCCATGTTTCTaGAAAGAGATAGCCAGGCTGGAGCTCAAGAATGAT +
Preference number: 4 (lower is better)
Translates to: KRNSIPKEWPCF*KEIARLELKND
Trigger: ATCATTCTTGAGCTCCAGCCTGGCTATCTCTTTCAAGAAACATGGCCACTCTTTAGGAATGCTGTTGCGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp TGGCTTGGAAGTCACAGAACTGCAGCAGAGCTATTATACAATTCATTTACAGTCTGCTGCCAAAATTCTTaGAACCAAGGGTTTCGGTGG +
Preference number: 4 (lower is better)
Translates to: WLGSHRTAAELLYNSFTVCCQNS*NQGFRW
Trigger: CCACCGAAACCCTTGGTTTCAAGAATTTTGGCAGCA...GACTGTAAATGAATTGTATAATAGCTCTGCTGCAGTTCTGTGACTTCCAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGTGGTATGGAACTGTTTaGAGAGACGCCTTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: NLPLVFLVNGGESEISRWWYGTV*RDALSA
Trigger: GGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCA...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp TGGCTTGGAAGTCACAGAACTGCAGCAGAGCTATTATACAATTCATTTACAGTCTTAGGGTCACTTTGCTaGGCCTTAGCATATCCCCTT +
Preference number: 4 (lower is better)
Translates to: WLGSHRTAAELLYNSFTVLGSLC*ALAYPL
Trigger: AAGGGGATATGCTAAGGCTCAGCAAAGTGACCCTAA...GACTGTAAATGAATTGTATAATAGCTCTGCTGCAGTTCTGTGACTTCCAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTATCAGCAGCTGCCATTaGTTTCTAGAAATACACACA +
Preference number: 4 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLISSCH*FLEIHT
Trigger: TGTGTGTATTTCTAGAAATCAATGGCAGCTGCTGAT...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp CACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCCGTAGAGTCAGAGAACTATTaGAAGTCTTGTTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: HSLSSSVLCMGHIHNASVESENY*KSCCIC
Trigger: GCAAATACAACAAGACTTGCAATAGTTCTCTGACTC...TACGGAGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGCTGGGGAGAGACCAATaGCAATTCTCTGAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: NLPLVFLVNGGESEISRWLGRDQ*QFSEGS
Trigger: GCTACCTTCAGAGAATTGGCATTGGTCTCTCCCCAG...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR GCA 90 bp GAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCGGTAGACTTCTCGAATaGTTGGGTAGTCATGCATTA +
Preference number: 4 (lower is better)
Translates to: EISRWNPRCRLLEEYFTTGRLLE*LGSHAL
Trigger: TAATGCATGACTACCCAAGCATTCGAGAAGTCTACC...GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp TTAGCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACTATTTCATACCTTCCTaGAGAGTCTCCATTCTCATC +
Preference number: 4 (lower is better)
Translates to: LAQHSLSSSVLCMGHIHNYFIPS*RVSILI
Trigger: GATGAGAATGGAGACTCTCCAGGAAGGTATGAAATA...GTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTTATTTCATACCTTCCTaGAGAGTCTCCATTCTCATC +
Preference number: 4 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLYFIPS*RVSILI
Trigger: GATGAGAATGGAGACTCTCCAGGAAGGTATGAAATA...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTAACGATGATGCCCAACTaGATGCATATGAGAATGAAA +
Preference number: 4 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLTMMPN*MHMRMK
Trigger: TTTCATTCTCATATGCATCCAGTTGGGCATCATCGT...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp CAGCAGAGCTATTATACAATTCATTTACAGTCAGAAATAGCTCCTAGTCTTCCTAGGTCGTCATGGTCGTaGGCAACTGGATCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: QQSYYTIHLQSEIAPSLPRSSWS*ATGSLW
Trigger: CCAAAGAGATCCAGTTGCCCACGACCATGACGACCT...AGGAAGACTAGGAGCTATTTCTGACTGTAAATGAATTGTATAATAGCTCTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGGGACCACTCTTCCAGTaGTGGGACTCGAAAAGAACA +
Preference number: 4 (lower is better)
Translates to: NLPLVFLVNGGESEISRWGPLFQ*WDSKRT
Trigger: TGTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCC...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR CAA 72 bp TCTGAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTaGGAAGAGTATTTCACAACCCAATTGGAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SEISRWNPRCRL*EEYFTTQLERK
Trigger: TTTCCTCTCCAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.4
ENST00000455756.6
CDS-3UTR TCA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGGGTTTTCTTTCTTGTTaGTGTGGATGGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: NLPLVFLVNGGESEISRWGFLSC*CGWTGA
Trigger: AGCGCCTGTCCATCCACATCAACAAGAAAGAAAACC...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp ATGAGTGGACTGCTTAGATTAGTCAGTATAACTTGGTTAAACCACGTCTTCTTCCTTCGTCGGTTGTCATaGGATAGCACTACTGATCTC +
Preference number: 4 (lower is better)
Translates to: MSGLLRLVSITWLNHVFFLRRLS*DSTTDL
Trigger: GAGATCAGTAGTGCTATCTCATGACAACCGACGAAG...GAAGAAGACGTGGTTTAACCAAGTTATACTGACTAATCTAAGCAGTCCACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp CAGCAGAGCTATTATACAATTCATTTACAGTCAGAAATAGCTCCTAGTCTTCCTAGACCCCAGTTGGCATaGCTTGCATGTGTACTCATC +
Preference number: 4 (lower is better)
Translates to: QQSYYTIHLQSEIAPSLPRPQLA*LACVLI
Trigger: GATGAGTACACATGCAAGGCATGCCAACTGGGGTCT...AGGAAGACTAGGAGCTATTTCTGACTGTAAATGAATTGTATAATAGCTCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp CAGCAGAGCTATTATACAATTCATTTACAGTCAGAAATAGCTCCTAGTCTTCCTGCCAGCCAGGATCCTTaGAATACGGTTGGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: QQSYYTIHLQSEIAPSLPASQDP*NTVGLC
Trigger: ACAAAGACCAACCGTATTGCAAGGATCCTGGCTGGC...AGGAAGACTAGGAGCTATTTCTGACTGTAAATGAATTGTATAATAGCTCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp ATGAGTGGACTGCTTAGATTAGTCAGTATAACTTGGTTAAACCACGTCTTCTTCAGGTGGAATCCCCGATaGAGGCTTTTGGAAGAGTAT +
Preference number: 4 (lower is better)
Translates to: MSGLLRLVSITWLNHVFFRWNPR*RLLEEY
Trigger: ATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCT...GAAGAAGACGTGGTTTAACCAAGTTATACTGACTAATCTAAGCAGTCCACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTTATTTGGGATCAGGGTaGTGTGATGATGTTATTTTC +
Preference number: 4 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLYLGSG*CDDVIF
Trigger: GAAAATAACATCATCACAGCACCCTGATCCCAAATA...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp TGGCTTGGAAGTCACAGAACTGCAGCAGAGCTATTATACAATTCATTTACAGTCAAAGCAATCACTAGCTaGGCACAGGCACTCATGAAT +
Preference number: 4 (lower is better)
Translates to: WLGSHRTAAELLYNSFTVKAITS*AQALMN
Trigger: ATTCATGAGTGCCTGTGCCCAGCTAGTGATTGCTTT...GACTGTAAATGAATTGTATAATAGCTCTGCTGCAGTTCTGTGACTTCCAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
3UTR CAA 72 bp AGTCAAGATAGGAATCCTCAGGTGAATGCCATCCTTTaGATGAGGATCCAAAGGGTATTAACACCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: SQDRNPQVNAIL*MRIQRVLTPQK
Trigger: CTTTTGAGGTGTTAATACCCTTTGGATCCTCATCAAAAGGATGGCATTCACCTGAGGATTCCTATCTTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGAATCATCAAACCACTTaGCATCGGGAGATTGGAGCT +
Preference number: 4 (lower is better)
Translates to: NLPLVFLVNGGESEISRWNHQTT*HREIGA
Trigger: AGCTCCAATCTCCCGATGTCAAGTGGTTTGATGATT...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR TCA 90 bp AGAATTGCTTTGCCTCTTTTTGGAATGGCTAAGAAAGACTGTGTGGTTAATATTCCTTTCGGATCACCTTaGTCTGGCCTTTCTCACATG +
Preference number: 4 (lower is better)
Translates to: RIALPLFGMAKKDCVVNIPFGSP*SGLSHM
Trigger: CATGTGAGAAAGGCCAGATCAAGGTGATCCGAAAGG...AATATTAACCACACAGTCTTTCTTAGCCATTCCAAAAAGAGGCAAAGCAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp AGTCAAGATAGGAATCCTCAGGTGAATGCCATCCTTTTGATGAGGATCCAAAGGGAGAATGTACCCAAATaGATTGTGAAGTTCATATCC +
Preference number: 4 (lower is better)
Translates to: SQDRNPQVNAILLMRIQRENVPK*IVKFIS
Trigger: GGATATGAACTTCACAATTCATTTGGGTACATTCTC...CCTTTGGATCCTCATCAAAAGGATGGCATTCACCTGAGGATTCCTATCTTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp AGTCAAGATAGGAATCCTCAGGTGAATGCCATCCTTTTGATGAGGATCCAAAGGGAGTCAGAGAACTATTaGAAGTCTTGTTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: SQDRNPQVNAILLMRIQRESENY*KSCCIC
Trigger: GCAAATACAACAAGACTTGCAATAGTTCTCTGACTC...CCTTTGGATCCTCATCAAAAGGATGGCATTCACCTGAGGATTCCTATCTTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGTTTCCGTCCATCAATTaGCTTCATGGCATCACAGAG +
Preference number: 4 (lower is better)
Translates to: NLPLVFLVNGGESEISRWFPSIN*LHGITE
Trigger: CTCTGTGATGCCATGAAGCCAATTGATGGACGGAAA...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CCA 90 bp AGAATTGCTTTGCCTCTTTTTGGAATGGCTAAGAAAGACTGTGTGGTTAATATTTCTTTCTTGTTGATGTaGATGGACAGGCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RIALPLFGMAKKDCVVNISFLLM*MDRRCH
Trigger: GTGGCAGCGCCTGTCCATCCACATCAACAAGAAAGA...AATATTAACCACACAGTCTTTCTTAGCCATTCCAAAAAGAGGCAAAGCAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp TATAACTTGGTTAAACCACGTCTTCTTCTTTCCATCCTGGGACATATCTCTCATGTAGTGTGTTATGCATaGGACACATTCACAACGCCT +
Preference number: 4 (lower is better)
Translates to: YNLVKPRLLLSILGHISHVVCYA*DTFTTP
Trigger: AGGCGTTGTGAATGTGTCCCATGCATAACACACTAC...ATGAGAGATATGTCCCAGGATGGAAAGAAGAAGACGTGGTTTAACCAAGTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp AGTTATTACTTGGAACCTGGTATTAGAATTGGCAAAGAGACAGAGTTAGCATCACCCGATGCAGGCTTTTaGAAGAGTATTTCACAACCC +
Preference number: 4 (lower is better)
Translates to: SYYLEPGIRIGKETELASPDAGF*KSISQP
Trigger: GGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGG...TGATGCTAACTCTGTCTCTTTGCCAATTCTAATACCAGGTTCCAAGTAATAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCTACTCCAGTATTGATTaGCAACATGGTGAAATAGTC +
Preference number: 4 (lower is better)
Translates to: LQLLINYALHPPLRCFTRYSSID*QHGEIV
Trigger: GACTATTTCACCATGTTGCCAATCAATACTGGAGTA...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTAAACATGTTCTTCAACTaGTCTAGAGTGAAACGTATT +
Preference number: 4 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLNMFFN*SRVKRI
Trigger: AATACGTTTCACTCTAGACCAGTTGAAGAACATGTT...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp TTAGCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACTTAGTCAGTATAACTTaGTTAAACCACGTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LAQHSLSSSVLCMGHIHNLVSIT*LNHVFF
Trigger: GAAGAAGACGTGGTTTAACCAAGTTATACTGACTAA...GTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp CAGCAGAGCTATTATACAATTCATTTACAGTCAGAAATAGCTCCTAGTCTTCCTAATCATCAAACCACTTaGCATCGGGAGATTGGAGCT +
Preference number: 4 (lower is better)
Translates to: QQSYYTIHLQSEIAPSLPNHQTT*HREIGA
Trigger: AGCTCCAATCTCCCGATGTCAAGTGGTTTGATGATT...AGGAAGACTAGGAGCTATTTCTGACTGTAAATGAATTGTATAATAGCTCTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp AGTTATTACTTGGAACCTGGTATTAGAATTGGCAAAGAGACAGAGTTAGCATCATTGACATCGGGAGATTaGAGCTTGATTGTGATGCCA +
Preference number: 4 (lower is better)
Translates to: SYYLEPGIRIGKETELASLTSGD*SLIVMP
Trigger: TGGCATCACAATCAAGCTCCAATCTCCCGATGTCAA...TGATGCTAACTCTGTCTCTTTGCCAATTCTAATACCAGGTTCCAAGTAATAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp CAGCAGAGCTATTATACAATTCATTTACAGTCAGAAATAGCTCCTAGTCTTCCTTCCTTGCAATACGGTTaGTCTTTGTTACAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QQSYYTIHLQSEIAPSLPSLQYG*SLLQGL
Trigger: CAGCCCTTGTAACAAAGACCAACCGTATTGCAAGGA...AGGAAGACTAGGAGCTATTTCTGACTGTAAATGAATTGTATAATAGCTCTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp AGTTATTACTTGGAACCTGGTATTAGAATTGGCAAAGAGACAGAGTTAGCATCACGACTGAATTATCACTaGGCACCAGGAACAGATTGT +
Preference number: 4 (lower is better)
Translates to: SYYLEPGIRIGKETELASRLNYH*APGTDC
Trigger: ACAATCTGTTCCTGGTGCCCAGTGATAATTCAGTCG...TGATGCTAACTCTGTCTCTTTGCCAATTCTAATACCAGGTTCCAAGTAATAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp TATAACTTGGTTAAACCACGTCTTCTTCTTTCCATCCTGGGACATATCTCTCATTACATTCATGTTTGGTaGATCAAAGACTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: YNLVKPRLLLSILGHISHYIHVW*IKDSSG
Trigger: CCCAGAAGAGTCTTTGATTCACCAAACATGAATGTA...ATGAGAGATATGTCCCAGGATGGAAAGAAGAAGACGTGGTTTAACCAAGTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp AATGGAAGGATGAGTGGACTGCTTAGATTAGTCAGTATAACTTGGTTAAACCACGAGATTCTGACAGCTTaGGGGTTATTAATAAGCTGT +
Preference number: 4 (lower is better)
Translates to: NGRMSGLLRLVSITWLNHEILTA*GLLISC
Trigger: ACAGCTTATTAATAACCCTCAAGCTGTCAGAATCTC...GTGGTTTAACCAAGTTATACTGACTAATCTAAGCAGTCCACTCATCCTTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp AGTTATTACTTGGAACCTGGTATTAGAATTGGCAAAGAGACAGAGTTAGCATCAAATTTCCAGCTACAATaGACCCCAGTGAGGGAATTA +
Preference number: 4 (lower is better)
Translates to: SYYLEPGIRIGKETELASNFQLQ*TPVREL
Trigger: TAATTCCCTCACTGGGGTGCATTGTAGCTGGAAATT...TGATGCTAACTCTGTCTCTTTGCCAATTCTAATACCAGGTTCCAAGTAATAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp ATGAGTGGACTGCTTAGATTAGTCAGTATAACTTGGTTAAACCACGTCTTCTTCACGATGATGCCCAACTaGATGCATATGAGAATGAAA +
Preference number: 4 (lower is better)
Translates to: MSGLLRLVSITWLNHVFFTMMPN*MHMRMK
Trigger: TTTCATTCTCATATGCATCCAGTTGGGCATCATCGT...GAAGAAGACGTGGTTTAACCAAGTTATACTGACTAATCTAAGCAGTCCACTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp CAGCAGAGCTATTATACAATTCATTTACAGTCAGAAATAGCTCCTAGTCTTCCTGACTTCTCGAATGCTTaGGTAGTCATGCATTATGTC +
Preference number: 4 (lower is better)
Translates to: QQSYYTIHLQSEIAPSLPDFSNA*VVMHYV
Trigger: GACATAATGCATGACTACCCAAGCATTCGAGAAGTC...AGGAAGACTAGGAGCTATTTCTGACTGTAAATGAATTGTATAATAGCTCTGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGTTGTATTGGGAGGTTTaGCTTAAAGTTGCAAGTAAG +
Preference number: 4 (lower is better)
Translates to: NLPLVFLVNGGESEISRWLYWEV*LKVASK
Trigger: CTTACTTGCAACTTTAAGTCAAACCTCCCAATACAA...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR TCA 90 bp CTTGGAAGTCACAGAACTGCAGCAGAGCTATTATACAATTCATTTACAGTCAGACCTATAGCCCTAGAATaGATATTCAGTTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: LGSHRTAAELLYNSFTVRPIALE*IFSSLC
Trigger: ACAAAGAGAACTGAATATTCATTCTAGGGCTATAGG...TCTGACTGTAAATGAATTGTATAATAGCTCTGCTGCAGTTCTGTGACTTCCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp ATGAGTGGACTGCTTAGATTAGTCAGTATAACTTGGTTAAACCACGTCTTCTTCATTTCACAACCCAATTaGAGAGGAAAATCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: MSGLLRLVSITWLNHVFFISQPN*RGKSLV
Trigger: TACCAGAGATTTTCCTCTCCAATTGGGTTGTGAAAT...GAAGAAGACGTGGTTTAACCAAGTTATACTGACTAATCTAAGCAGTCCACTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR GCA 90 bp AATGGAAGGATGAGTGGACTGCTTAGATTAGTCAGTATAACTTGGTTAAACCACGCCAAAATATACTTCTaGCTCACAGCACATATTTTT +
Preference number: 4 (lower is better)
Translates to: NGRMSGLLRLVSITWLNHAKIYF*LTAHIF
Trigger: AAAAATATGTGCTGTGAGGCAGAAGTATATTTTGGC...GTGGTTTAACCAAGTTATACTGACTAATCTAAGCAGTCCACTCATCCTTCCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp CTTGGAAGTCACAGAACTGCAGCAGAGCTATTATACAATTCATTTACAGTCAGAGATTATGATAGCATGTaGAAGTATCAGATGGCAATT +
Preference number: 4 (lower is better)
Translates to: LGSHRTAAELLYNSFTVRDYDSM*KYQMAI
Trigger: AATTGCCATCTGATACTTCCACATGCTATCATAATC...TCTGACTGTAAATGAATTGTATAATAGCTCTGCTGCAGTTCTGTGACTTCCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CCA 90 bp AGAATTGCTTTGCCTCTTTTTGGAATGGCTAAGAAAGACTGTGTGGTTAATATTAGAGCATTTAATTCCTaGCTTGGAAGTCACAGAACT +
Preference number: 4 (lower is better)
Translates to: RIALPLFGMAKKDCVVNIRAFNS*LGSHRT
Trigger: AGTTCTGTGACTTCCAAGCCAGGAATTAAATGCTCT...AATATTAACCACACAGTCTTTCTTAGCCATTCCAAAAAGAGGCAAAGCAATTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS TCA 90 bp CGTCGTCCGTGCGGCTGGCCGAGCCCGCGCGGTGGCTCAGCGTGCTaGTGGGCGACGGTGAGCGCGGCCGCGCGGGCGCCGGGAAGTGCT +
Preference number: 5 (lower is better)
Translates to: RRPCGWPSPRGGSAC*WATVSAAARAPGSA
Trigger: AGCACTTCCCGGCGCCCGCGCGGCCGCGCTCACCGTCGCCCATCAGCACGCTGAGCCACCGCGCGGGCTCGGCCAGCCGCACGGACGACG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CCA 90 bp AGCGACGGCACATCGTCGTCCGTGCGGCTGGCCGAGCCCGCGCGGTaGCTCAGCGTGCTGATGGGCGACGGTGAGCGCGGCCGCGCGGGC +
Preference number: 5 (lower is better)
Translates to: SDGTSSSVRLAEPAR*LSVLMGDGERGRAG
Trigger: GCCCGCGCGGCCGCGCTCACCGTCGCCCATCAGCACGCTGAGCCACCGCGCGGGCTCGGCCAGCCGCACGGACGACGATGTGCCGTCGCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CCA 90 bp CTCCTCAGCCTCGGCCACATCATACAGCGCCTTGGGGCCGGCGTCTaGGGACTCGGGCCCGCCTGGGCCGGCGCCTGCGCAGCCCGCACC +
Preference number: 5 (lower is better)
Translates to: LLSLGHIIQRLGAGV*GLGPAWAGACAART
Trigger: GGTGCGGGCTGCGCAGGCGCCGGCCCAGGCGGGCCCGAGTCCCCAGACGCCGGCCCCAAGGCGCTGTATGATGTGGCCGAGGCTGAGGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CCA 90 bp GCGCCGGGAAGTGCTCCTCAGCCTCGGCCACATCATACAGCGCCTTaGGGCCGGCGTCTGGGGACTCGGGCCCGCCTGGGCCGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: APGSAPQPRPHHTAP*GRRLGTRARLGRRL
Trigger: CAGGCGCCGGCCCAGGCGGGCCCGAGTCCCCAGACGCCGGCCCCAAGGCGCTGTATGATGTGGCCGAGGCTGAGGAGCACTTCCCGGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS GCA 90 bp GTGCTGATGGGCGACGGTGAGCGCGGCCGCGCGGGCGCCGGGAAGTaGTCCTCAGCCTCGGCCACATCATACAGCGCCTTGGGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: VLMGDGERGRAGAGK*SSASATSYSALGPA
Trigger: CGCCGGCCCCAAGGCGCTGTATGATGTGGCCGAGGCTGAGGAGCACTTCCCGGCGCCCGCGCGGCCGCGCTCACCGTCGCCCATCAGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS GCA 90 bp ATGAGGGAGCCCTGCGAGGAGCTGCTGCGCGCCACAGGCTCCGAGTaGAGCGACGGCACATCGTCGTCCGTGCGGCTGGCCGAGCCCGCG +
Preference number: 5 (lower is better)
Translates to: MREPCEELLRATGSE*SDGTSSSVRLAEPA
Trigger: CGCGGGCTCGGCCAGCCGCACGGACGACGATGTGCCGTCGCTGCACTCGGAGCCTGTGGCGCGCAGCAGCTCCTCGCAGGGCTCCCTCAT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CCA 90 bp GCCGCGGGCTGCGCGCCTCCCGTGACTTCGATGGCCGGCAGAGGCTaGATTTCGGCAAAGGTCGTCATGGTCGTGGGCAACTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: AAGCAPPVTSMAGRG*ISAKVVMVVGNWIS
Trigger: AGAGATCCAGTTGCCCACGACCATGACGACCTTTGCCGAAATCCAGCCTCTGCCGGCCATCGAAGTCACGGGAGGCGCGCAGCCCGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CCA 90 bp GGATTTCGGCAAAGGTCGTCATGGTCGTGGGCAACTGGATCTCTTTaGGGATCAGGTAGGACGAGCAGAGCGGGGCGCCGACGCCGGGGC +
Preference number: 5 (lower is better)
Translates to: GFRQRSSWSWATGSL*GSGRTSRAGRRRRG
Trigger: GCCCCGGCGTCGGCGCCCCGCTCTGCTCGTCCTACCTGATCCCCAAAGAGATCCAGTTGCCCACGACCATGACGACCTTTGCCGAAATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS-3UTR CAA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCCTGGCGAGTTGGGGGTaGTGCTCCCCGAGTCCACCG +
Preference number: 5 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGLASWG*CSPSPP
Trigger: CGGTGGACTCGGGGAGCACAACCCCCAACTCGCCAG...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS CCA 90 bp CGATGGCCGGCAGAGGCTGGATTTCGGCAAAGGTCGTCATGGTCGTaGGCAACTGGATCTCTTTGGGGATCAGGTAGGACGAGCAGAGCG +
Preference number: 5 (lower is better)
Translates to: RWPAEAGFRQRSSWS*ATGSLWGSGRTSRA
Trigger: CGCTCTGCTCGTCCTACCTGATCCCCAAAGAGATCCAGTTGCCCACGACCATGACGACCTTTGCCGAAATCCAGCCTCTGCCGGCCATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS GCA 90 bp GGGTTTTCTTTCTTGTTGATGTGGATGGACAGGCGCTGCCACAGGTaGTGCCCCCGGCTGCTCTTCTCATTCTGGGCCCACGTGACGGAT +
Preference number: 5 (lower is better)
Translates to: GFSFLLMWMDRRCHR*CPRLLFSFWAHVTD
Trigger: ATCCGTCACGTGGGCCCAGAATGAGAAGAGCAGCCGGGGGCAGCACCTGTGGCAGCGCCTGTCCATCCACATCAACAAGAAAGAAAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS-3UTR CAA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTTTGAGCTCGCTGATGTaGGCCGTGAAGCGGGTGACC +
Preference number: 5 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCLSSLM*AVKRVT
Trigger: GGTCACCCGCTTCACGGCCAACATCAGCGAGCTCAA...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCACATCATACAGCGCCTaGGGGCCGGCGTCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNATSYSA*GPASGD
Trigger: GTCCCCAGACGCCGGCCCCAAGGCGCTGTATGATGT...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS CCA 90 bp ACAGGGTGGCCAGGAGGCCAAGGCAGGCAAACACCACAGCTGCAATaGGTTCAGGGTCACCCCATCGAAGATACTGTACTGGGATCAAGT +
Preference number: 5 (lower is better)
Translates to: TGWPGGQGRQTPQLQ*VQGHPIEDTVLGSS
Trigger: ACTTGATCCCAGTACAGTATCTTCGATGGGGTGACCCTGAACCCATTGCAGCTGTGGTGTTTGCCTGCCTTGGCCTCCTGGCCACCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS-3UTR CAA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCCTCTTGGGGAAGGGCTaGATGACGGCCGTTTGGTTG +
Preference number: 5 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGLLGKG*MTAVWL
Trigger: CAACCAAACGGCCGTCATCAAGCCCTTCCCCAAGAG...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTATCCTCCAGGTCTGGCTaGGCGGCCGCAGCCTCGGGA +
Preference number: 5 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLSSRSG*AAAASG
Trigger: TCCCGAGGCTGCGGCCGCCAAGCCAGACCTGGAGGA...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS TCA 90 bp TGTACCTTAAGGTTTCCCCAGAGGAGCCCCTTCTCTTCCACAGGTTaGCTAGGCTGCTGGATCTGCTGGCTGCGGAGGATGACTTGCCAT +
Preference number: 5 (lower is better)
Translates to: CTLRFPQRSPFSSTG*LGCWICWLRRMTCH
Trigger: ATGGCAAGTCATCCTCCGCAGCCAGCAGATCCAGCAGCCTAGTCAACCTGTGGAAGAGAAGGGGCTCCTCTGGGGAAACCTTAAGGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305447.5
CDS TCA 90 bp TGGAACTTAAGGTTTCCCCAGAGGAGCCCCTTCTCTTCCACAGGTTaGCTAGGCTGCTGGATCTGCTGGCTGCGGAGGATGACTTGCCAT +
Preference number: 5 (lower is better)
Translates to: WNLRFPQRSPFSSTG*LGCWICWLRRMTCH
Trigger: ATGGCAAGTCATCCTCCGCAGCCAGCAGATCCAGCAGCCTAGTCAACCTGTGGAAGAGAAGGGGCTCCTCTGGGGAAACCTTAAGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS GCA 90 bp AACAAACAGGGTGGCCAGGAGGCCAAGGCAGGCAAACACCACAGCTaGAATGGGTTCAGGGTCACCCCATCGAAGATACTGTACTGGGAT +
Preference number: 5 (lower is better)
Translates to: NKQGGQEAKAGKHHS*NGFRVTPSKILYWD
Trigger: ATCCCAGTACAGTATCTTCGATGGGGTGACCCTGAACCCATTGCAGCTGTGGTGTTTGCCTGCCTTGGCCTCCTGGCCACCCTGTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS GCA 90 bp TTTTCTTTCTTGTTGATGTGGATGGACAGGCGCTGCCACAGGTGCTaGCCCCGGCTGCTCTTCTCATTCTGGGCCCACGTGACGGATTTT +
Preference number: 5 (lower is better)
Translates to: FSFLLMWMDRRCHRC*PRLLFSFWAHVTDF
Trigger: AAAATCCGTCACGTGGGCCCAGAATGAGAAGAGCAGCCGGGGGCAGCACCTGTGGCAGCGCCTGTCCATCCACATCAACAAGAAAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS-3UTR CAA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCTCCTCCAGGTCTGGCTaGGCGGCCGCAGCCTCGGGA +
Preference number: 5 (lower is better)
Translates to: LQLLINYALHPPLRCFTRSSRSG*AAAASG
Trigger: TCCCGAGGCTGCGGCCGCCAAGCCAGACCTGGAGGA...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp CACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCCGTATCGGACACTGGCGAGTaGGGGGTTGTGCTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: HSLSSSVLCMGHIHNASVSDTGE*GVVLPE
Trigger: CTCGGGGAGCACAACCCCCAACTCGCCAGTGTCCGA...TACGGAGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCAAGGGTTTCGGTGGTTaGTTTCTGGCCGGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGKGFGG*FLAGAS
Trigger: TGAAGCTCCGGCCAGAAACAAACCACCGAAACCCTT...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCGGGCCAAGACCCCAGTaGGCATGCCTTGCATGTGTA +
Preference number: 5 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNAGPRPQ*ACLACV
Trigger: TACACATGCAAGGCATGCCAACTGGGGTCTTGGCCC...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTACGTTTCTCTCTGGTTaGGCCAGGATGATGTACACC +
Preference number: 5 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCTFLSG*ARMMYT
Trigger: GGTGTACATCATCCTGGCCAAACCAGAGAGAAACGT...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCGCTGCGGAGGATGACTaGCCATCCCCTACATGCATG +
Preference number: 5 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNAAAEDD*PSPTCM
Trigger: CATGCATGTAGGGGATGGCAAGTCATCCTCCGCAGC...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCCTTCTCTTCCACAGGTaGACTAGGCTGCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGLLFHR*TRLLDL
Trigger: CAGATCCAGCAGCCTAGTCAACCTGTGGAAGAGAAG...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTGGGTTTTCTTTCTTGTaGATGTGGATGGACAGGCGC +
Preference number: 5 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCGFSFL*MWMDRR
Trigger: GCGCCTGTCCATCCACATCAACAAGAAAGAAAACCC...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTAACATCATACAGCGCCTaGGGGCCGGCGTCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLTSYSA*GPASGD
Trigger: GTCCCCAGACGCCGGCCCCAAGGCGCTGTATGATGT...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp AATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCAATTGGAGAGGAAACTGGCGAGTTGGGGGTaGTGCTCCCCGAGTCCACCG +
Preference number: 5 (lower is better)
Translates to: NPRCRLLEEYFTTQLERKLASWG*CSPSPP
Trigger: CGGTGGACTCGGGGAGCACAACCCCCAACTCGCCAG...TTTCCTCTCCAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCGTGACAACTCCTAGGTaGGTGGTGTTACAGATCAGG +
Preference number: 5 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGVTTPR*VVLQIR
Trigger: CCTGATCTGTAACACCACCAACCTAGGAGTTGTCAC...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTATGACGGCCGTTTGGTaGGGGTTTTCTTTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCMTAVW*GFSFLL
Trigger: CAACAAGAAAGAAAACCCCAACCAAACGGCCGTCAT...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp CACTTGGTATGGAACTGTTTGAAGAGACGCCTTGTCAGCCCTCAAAGATATCAGCGGCTCTCCGTGCTCTaGGGGAAGGGCTTGATGACG +
Preference number: 5 (lower is better)
Translates to: HLVWNCLKRRLVSPQRYQRLSVL*GKGLMT
Trigger: CGTCATCAAGCCCTTCCCCAAGAGCACGGAGAGCCG...CTGATATCTTTGAGGGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTATCCTTGCAATACGGTaGGTCTTTGTTACAAGGGCT +
Preference number: 5 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCILAIR*VFVTRA
Trigger: AGCCCTTGTAACAAAGACCAACCGTATTGCAAGGAT...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCCTTCTCTTCCACAGGTaGACTAGGCTGCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNALLFHR*TRLLDL
Trigger: CAGATCCAGCAGCCTAGTCAACCTGTGGAAGAGAAG...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCCGGCTCTCCGTGCTCTaGGGGAAGGGCTTGATGACG +
Preference number: 5 (lower is better)
Translates to: LQLLINYALHPPLRCFTRRLSVL*GKGLMT
Trigger: CGTCATCAAGCCCTTCCCCAAGAGCACGGAGAGCCG...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS TCA 90 bp TCGGGAGATTGGAGCTTGATTGTGATGCCACCAACAGCTTCTCGCTaGTATCCATCTGTCACATCATACCTGTCAGCCCAGCCATCACTG +
Preference number: 5 (lower is better)
Translates to: SGDWSLIVMPPTASR*YPSVTSYLSAQPSL
Trigger: CAGTGATGGCTGGGCTGACAGGTATGATGTGACAGATGGATATCAGCGAGAAGCTGTTGGTGGCATCACAATCAAGCTCCAATCTCCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS-3UTR CAA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCGGGAGATTGGAGCTaGATTGTGATGCCACCAACA +
Preference number: 5 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNASGDWS*IVMPPT
Trigger: TGTTGGTGGCATCACAATCAAGCTCCAATCTCCCGA...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TTAGCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGGGCCAAGACCCCAGTaGGCATGCCTTGCATGTGTA +
Preference number: 5 (lower is better)
Translates to: LAQHSLSSSVLCMGHIHNGPRPQ*ACLACV
Trigger: TACACATGCAAGGCATGCCAACTGGGGTCTTGGCCC...GTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCAATCTGCCAAAAGATTaGTCGTCGGTTTCTTCGTCG +
Preference number: 5 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGNLPKD*SSVSSS
Trigger: CGACGAAGAAACCGACGACAAATCTTTTGGCAGATT...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCCCTAGAGCAAAGTTGGTATGGAACTGTTaGAAGAGACGCCTTGTCAGC +
Preference number: 5 (lower is better)
Translates to: CSSPSVTLFHTHCFPRAKLVWNC*KRRLVS
Trigger: GCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAA...CTTTGCTCTAGGGAAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTCTTCCACTGGTTTTCTaGGTTAATGGAGGTGAATCT +
Preference number: 5 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCLPLVF*VNGGES
Trigger: AGATTCACCTCCATTAACCAAGAAAACCAGTGGAAG...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp ACTACTGATCTCGTGTTTCCATTAAGGGGTGCCCTTGGCATCTTCCCCCTGGGCTCATTTAGGGTCACTTaGCTGAGCCTTAGCATATCC +
Preference number: 5 (lower is better)
Translates to: TTDLVFPLRGALGIFPLGSFRVT*LSLSIS
Trigger: GGATATGCTAAGGCTCAGCAAAGTGACCCTAAATGA...GCCCAGGGGGAAGATGCCAAGGGCACCCCTTAATGGAAACACGAGATCAGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS CCA 90 bp TTTTCATCAGGGACTCCAAAAGTTTCCGTCCATCAATTGGCTTCATaGCATCACAGAGTCCTGCATAGCCTGGGCAGAGGGACATCTGCA +
Preference number: 5 (lower is better)
Translates to: FSSGTPKVSVHQLAS*HHRVLHSLGRGTSA
Trigger: TGCAGATGTCCCTCTGCCCAGGCTATGCAGGACTCTGTGATGCCATGAAGCCAATTGATGGACGGAAACTTTTGGAGTCCCTGATGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS-3UTR CAA 90 bp TGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCCCTAGAGCAAAGATCCTTGCAATACGGTaGGTCTTTGTTACAAGGGCT +
Preference number: 5 (lower is better)
Translates to: CSSPSVTLFHTHCFPRAKILAIR*VFVTRA
Trigger: AGCCCTTGTAACAAAGACCAACCGTATTGCAAGGAT...CTTTGCTCTAGGGAAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp GAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCGCTGCGGAGGATGACTaGCCATCCCCTACATGCATG +
Preference number: 5 (lower is better)
Translates to: EISRWNPRCRLLEEYFTTAAEDD*PSPTCM
Trigger: CATGCATGTAGGGGATGGCAAGTCATCCTCCGCAGC...GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTAGACAGCATCATGGAGTaGAGCTCGCTGATGTTGGCC +
Preference number: 5 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLDSIME*SSLMLA
Trigger: GGCCAACATCAGCGAGCTCAACTCCATGATGCTGTC...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTACCAGGCGACTATGCTaGCCATTGTGTGTGTGTGAA +
Preference number: 5 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPTRRLC*PLCVCE
Trigger: TTCACACACACACAATGGCAAGCATAGTCGCCTGGT...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS TCA 90 bp TGCCAATTCTCTGAAGGTAGCAGTAAATCTGTTTGGGCTTCGCAATaGGGCAGAAGGTACATAAGTAGCCCAGGCAGATGCCAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: CQFSEGSSKSVWASQ*GRRYISSPGRCQQG
Trigger: TCCTTGCTGGCATCTGCCTGGGCTACTTATGTACCTTCTGCCTCATTGCGAAGCCCAAACAGATTTACTGCTACCTTCAGAGAATTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS-3UTR CAA 90 bp CTTGGCATCTTCCCCCTGGGCCGTAACCAGGCGACTATGCTTGCCATTGTGTGTAAAATCAACAATCCATaGTATCCAAGTGGAGTGACA +
Preference number: 5 (lower is better)
Translates to: LGIFPLGRNQATMLAIVCKINNP*YPSGVT
Trigger: TGTCACTCCACTTGGATACAATGGATTGTTGATTTT...ACACACAATGGCAAGCATAGTCGCCTGGTTACGGCCCAGGGGGAAGATGCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TGGGGTCTATGGACCACTCTTCCAGTGGTGGGACTCGAAAAGAACAAAGGAGCTTTGGGGTTTTCTTTCTaGTTGATGTGGATGGACAGG +
Preference number: 5 (lower is better)
Translates to: WGLWTTLPVVGLEKNKGALGFSF*LMWMDR
Trigger: CCTGTCCATCCACATCAACAAGAAAGAAAACCCCAA...AGCTCCTTTGTTCTTTTCGAGTCCCACCACTGGAAGAGTGGTCCATAGACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CAA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCTTGATGACGGCCGTTaGGTTGGGGTTTTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPLDDGR*VGVFFL
Trigger: AAGAAAGAAAACCCCAACCAAACGGCCGTCATCAAG...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCGACAGCATCATGGAGTaGAGCTCGCTGATGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LQLLINYALHPPLRCFTRDSIME*SSLMLA
Trigger: GGCCAACATCAGCGAGCTCAACTCCATGATGCTGTC...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCATAAGAGTGTCATATTaGGGAGACGACGGGATACAG +
Preference number: 5 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNAIRVSY*GDDGIQ
Trigger: CTGTATCCCGTCGTCTCCCAAATATGACACTCTTAT...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCGTGACGGATTTTCCATaGGAACTTAAGGTTTCCCCA +
Preference number: 5 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNAVTDFP*ELKVSP
Trigger: TGGGGAAACCTTAAGTTCCAATGGAAAATCCGTCAC...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS GCA 90 bp TCTTTGTTACAAGGGCTGAGTAGCTCATGGCTGGGGAGAGACCAATaGCAATTCTCTGAAGGTAGCAGTAAATCTGTTTGGGCTTCGCAA +
Preference number: 5 (lower is better)
Translates to: SLLQGLSSSWLGRDQ*QFSEGSSKSVWASQ
Trigger: TTGCGAAGCCCAAACAGATTTACTGCTACCTTCAGAGAATTGGCATTGGTCTCTCCCCAGCCATGAGCTACTCAGCCCTTGTAACAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CCA 90 bp ATGTCAGGAGGCTCCATTATAAAGAGGGCAACGATGATGCCCAACTaGATGCATATGAGAATGAAAGCAATCACTAGCTGGGCACAGGCA +
Preference number: 5 (lower is better)
Translates to: MSGGSIIKRATMMPN*MHMRMKAITSWAQA
Trigger: TGCCTGTGCCCAGCTAGTGATTGCTTTCATTCTCATATGCATCCAGTTGGGCATCATCGTTGCCCTCTTTATAATGGAGCCTCCTGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS-3UTR CAA 90 bp TTAGCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACCCCTTTCGGATCACCTaGATCTGGCCTTTCTCACAT +
Preference number: 5 (lower is better)
Translates to: LAQHSLSSSVLCMGHIHNPFRIT*IWPFSH
Trigger: ATGTGAGAAAGGCCAGATCAAGGTGATCCGAAAGGG...GTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp CACTTGGTATGGAACTGTTTGAAGAGACGCCTTGTCAGCCCTCAAAGATATCAGCCCAGTTGGCATGCCTaGCATGTGTACTCATCAAAG +
Preference number: 5 (lower is better)
Translates to: HLVWNCLKRRLVSPQRYQPSWHA*HVYSSK
Trigger: CTTTGATGAGTACACATGCAAGGCATGCCAACTGGG...CTGATATCTTTGAGGGCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGTTGAGCTCGCTGATGTaGGCCGTGAAGCGGGTGACC +
Preference number: 5 (lower is better)
Translates to: NLPLVFLVNGGESEISRWLSSLM*AVKRVT
Trigger: GGTCACCCGCTTCACGGCCAACATCAGCGAGCTCAA...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTAACCAGGCGACTATGCTaGCCATTGTGTGTGTGTGAA +
Preference number: 5 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLTRRLC*PLCVCE
Trigger: TTCACACACACACAATGGCAAGCATAGTCGCCTGGT...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCCCCGATGCAGGCTTTaGGAAGAGTATTTCACAACC +
Preference number: 5 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLPRCRL*EEYFTT
Trigger: GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGG...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp GAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCTTGACATCGGGAGATaGGAGCTTGATTGTGATGCC +
Preference number: 5 (lower is better)
Translates to: EISRWNPRCRLLEEYFTTLDIGR*ELDCDA
Trigger: GGCATCACAATCAAGCTCCAATCTCCCGATGTCAAG...GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCCCCTTTCGGATCACCTaGATCTGGCCTTTCTCACAT +
Preference number: 5 (lower is better)
Translates to: LQLLINYALHPPLRCFTRPFRIT*IWPFSH
Trigger: ATGTGAGAAAGGCCAGATCAAGGTGATCCGAAAGGG...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCGTGACAACTCCTAGGTaGGTGGTGTTACAGATCAGG +
Preference number: 5 (lower is better)
Translates to: LQLLINYALHPPLRCFTRVTTPR*VVLQIR
Trigger: CCTGATCTGTAACACCACCAACCTAGGAGTTGTCAC...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp GACGGTTCTTCCCAATCCAGATATGTTCTTCTTAGGCTGCCCCCACTCCTTTCCATATACTTGGCCTCGTaGAAGTTAGCTGGAACATTT +
Preference number: 5 (lower is better)
Translates to: DGSSQSRYVLLRLPPLLSIYLAS*KLAGTF
Trigger: AAATGTTCCAGCTAACTTCAACGAGGCCAAGTATAT...GGAAAGGAGTGGGGGCAGCCTAAGAAGAACATATCTGGATTGGGAAGAACCGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CAA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACGTTTCTCTCTGGTTaGGCCAGGATGATGTACACC +
Preference number: 5 (lower is better)
Translates to: LQLLINYALHPPLRCFTRTFLSG*ARMMYT
Trigger: GGTGTACATCATCCTGGCCAAACCAGAGAGAAACGT...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCTTGATGACGGCCGTTaGGTTGGGGTTTTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLLDDGR*VGVFFL
Trigger: AAGAAAGAAAACCCCAACCAAACGGCCGTCATCAAG...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGCTCTTGGGGAAGGGCTaGATGACGGCCGTTTGGTTG +
Preference number: 5 (lower is better)
Translates to: NLPLVFLVNGGESEISRWLLGKG*MTAVWL
Trigger: CAACCAAACGGCCGTCATCAAGCCCTTCCCCAAGAG...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCCCCCGATGCAGGCTTTaGGAAGAGTATTTCACAACC +
Preference number: 5 (lower is better)
Translates to: LQLLINYALHPPLRCFTRPRCRL*EEYFTT
Trigger: GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGG...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp CGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTGAACAAAGGAGCTCTTaGTGCATCAGGTTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: RSTHYPVVCYAWDTFTTPEQRSS*CIRFSK
Trigger: TTTTGAGAACCTGATGCACAAAGAGCTCCTTTGTTC...AGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CAA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCAGAGTCAGAGAACTATaGCAAGTCTTGTTGTATTTG +
Preference number: 5 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNARVREL*QVLLYL
Trigger: CAAATACAACAAGACTTGCAATAGTTCTCTGACTCT...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCGTTTCCGTCCATCAATaGGCTTCATGGCATCACAGA +
Preference number: 5 (lower is better)
Translates to: LQLLINYALHPPLRCFTRVSVHQ*ASWHHR
Trigger: TCTGTGATGCCATGAAGCCAATTGATGGACGGAAAC...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp GCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCAAAATCAACAATCCATaGTATCCAAGTGGAGTGACA +
Preference number: 5 (lower is better)
Translates to: AQHSLSSSVLCMGHIHNAKINNP*YPSGVT
Trigger: TGTCACTCCACTTGGATACAATGGATTGTTGATTTT...GGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp AATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCAATTGGAGAGGAAAATGACGGCCGTTTGGTaGGGGTTTTCTTTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: NPRCRLLEEYFTTQLERKMTAVW*GFSFLL
Trigger: CAACAAGAAAGAAAACCCCAACCAAACGGCCGTCAT...TTTCCTCTCCAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TTAGCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACAATCTGCCAAAAGATTaGTCGTCGGTTTCTTCGTCG +
Preference number: 5 (lower is better)
Translates to: LAQHSLSSSVLCMGHIHNNLPKD*SSVSSS
Trigger: CGACGAAGAAACCGACGACAAATCTTTTGGCAGATT...GTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp AATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCAATTGGAGAGGAAATTGGTATGGAACTGTTaGAAGAGACGCCTTGTCAGC +
Preference number: 5 (lower is better)
Translates to: NPRCRLLEEYFTTQLERKLVWNC*KRRLVS
Trigger: GCTGACAAGGCGTCTCTTCAAACAGTTCCATACCAA...TTTCCTCTCCAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCACTGCTTCCTAGAGCAAAGCACTaGGTATGGAACTGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: CLLTMLFTLRYAVSHALLPRAKH*VWNCLK
Trigger: CTTCAAACAGTTCCATACCAAGTGCTTTGCTCTAGG...AAGCAGTGCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCATGCTGCCAAAATTCTaGAAACCAAGGGTTTCGGTG +
Preference number: 5 (lower is better)
Translates to: LQLLINYALHPPLRCFTRMLPKF*KPRVSV
Trigger: CACCGAAACCCTTGGTTTCAAGAATTTTGGCAGCAT...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGTCCCTGCTTGAGGACTaGACTACTGGTGTATCACGG +
Preference number: 5 (lower is better)
Translates to: NLPLVFLVNGGESEISRWSLLED*TTGVSR
Trigger: CCGTGATACACCAGTAGTCAAGTCCTCAAGCAGGGA...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp CTTGGAAGTCACAGAACTGCAGCAGAGCTATTATACAATTCATTTACAGTCAGATCCCTGCTTGAGGACTaGACTACTGGTGTATCACGG +
Preference number: 5 (lower is better)
Translates to: LGSHRTAAELLYNSFTVRSLLED*TTGVSR
Trigger: CCGTGATACACCAGTAGTCAAGTCCTCAAGCAGGGA...TCTGACTGTAAATGAATTGTATAATAGCTCTGCTGCAGTTCTGTGACTTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CAA 90 bp TTAGCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACAGACTTCTCGAATGCTaGGGTAGTCATGCATTATGT +
Preference number: 5 (lower is better)
Translates to: LAQHSLSSSVLCMGHIHNRLLEC*GSHALC
Trigger: ACATAATGCATGACTACCCAAGCATTCGAGAAGTCT...GTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTAAGACTTCTCGAATGCTaGGGTAGTCATGCATTATGT +
Preference number: 5 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLRLLEC*GSHALC
Trigger: ACATAATGCATGACTACCCAAGCATTCGAGAAGTCT...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp CACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCCGTAATATACTTGGCCTCGTaGAAGTTAGCTGGAACATTT +
Preference number: 5 (lower is better)
Translates to: HSLSSSVLCMGHIHNASVIYLAS*KLAGTF
Trigger: AAATGTTCCAGCTAACTTCAACGAGGCCAAGTATAT...TACGGAGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCTTGGGGTTTTCTTTCTaGTTGATGTGGATGGACAGG +
Preference number: 5 (lower is better)
Translates to: LQLLINYALHPPLRCFTRLGFSF*LMWMDR
Trigger: CCTGTCCATCCACATCAACAAGAAAGAAAACCCCAA...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp GAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCATAAGAGTGTCATATTaGGGAGACGACGGGATACAG +
Preference number: 5 (lower is better)
Translates to: EISRWNPRCRLLEEYFTTIRVSY*GDDGIQ
Trigger: CTGTATCCCGTCGTCTCCCAAATATGACACTCTTAT...GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp AGTCAAGATAGGAATCCTCAGGTGAATGCCATCCTTTTGATGAGGATCCAAAGGCCTAGAGCAAAGCACTaGGTATGGAACTGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: SQDRNPQVNAILLMRIQRPRAKH*VWNCLK
Trigger: CTTCAAACAGTTCCATACCAAGTGCTTTGCTCTAGG...CCTTTGGATCCTCATCAAAAGGATGGCATTCACCTGAGGATTCCTATCTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CAA 90 bp AATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCAATTGGAGAGGAAAGTGACGGATTTTCCATaGGAACTTAAGGTTTCCCCA +
Preference number: 5 (lower is better)
Translates to: NPRCRLLEEYFTTQLERKVTDFP*ELKVSP
Trigger: TGGGGAAACCTTAAGTTCCAATGGAAAATCCGTCAC...TTTCCTCTCCAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS GCA 90 bp GATGTGTTTTCAGAGTCAGAGAACTATTGCAAGTCTTGTTGTATTTaGTGTTCTCCTGTGGAAACCCTTCCAGTCGGCACTGAAAACGAT +
Preference number: 5 (lower is better)
Translates to: DVFSESENYCKSCCI*CSPVETLPVGTEND
Trigger: ATCGTTTTCAGTGCCGACTGGAAGGGTTTCCACAGGAGAACAGCAAATACAACAAGACTTGCAATAGTTCTCTGACTCTGAAAACACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS-3UTR CAA 90 bp ATGAGTGGACTGCTTAGATTAGTCAGTATAACTTGGTTAAACCACGTCTTCTTCTCGGGAGATTGGAGCTaGATTGTGATGCCACCAACA +
Preference number: 5 (lower is better)
Translates to: MSGLLRLVSITWLNHVFFSGDWS*IVMPPT
Trigger: TGTTGGTGGCATCACAATCAAGCTCCAATCTCCCGA...GAAGAAGACGTGGTTTAACCAAGTTATACTGACTAATCTAAGCAGTCCACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CAA 90 bp GAAATAAGTAGGTGGAATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCAAGTCTTGTTGTATTaGCTGTTCTCCTGTGGAAAC +
Preference number: 5 (lower is better)
Translates to: EISRWNPRCRLLEEYFTTQVLLY*LFSCGN
Trigger: GTTTCCACAGGAGAACAGCAAATACAACAAGACTTG...GGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATTCCACCTACTTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp CACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACGCCTCCGTAAGAGTCAGAGAACTATaGCAAGTCTTGTTGTATTTG +
Preference number: 5 (lower is better)
Translates to: HSLSSSVLCMGHIHNASVRVREL*QVLLYL
Trigger: CAAATACAACAAGACTTGCAATAGTTCTCTGACTCT...TACGGAGGCGTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TTAGCGCAGCACTCACTATCCAGTAGTGTGTTATGCATGGGACACATTCACAACACAGATCTGATGATGTaGCTTTTCTTGGACCATACT +
Preference number: 5 (lower is better)
Translates to: LAQHSLSSSVLCMGHIHNTDLMM*LFLDHT
Trigger: AGTATGGTCCAAGAAAAGCAACATCATCAGATCTGT...GTTGTGAATGTGTCCCATGCATAACACACTACTGGATAGTGAGTGCTGCGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGCCCAGTTGGCATGCCTaGCATGTGTACTCATCAAAG +
Preference number: 5 (lower is better)
Translates to: NLPLVFLVNGGESEISRWPSWHA*HVYSSK
Trigger: CTTTGATGAGTACACATGCAAGGCATGCCAACTGGG...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp AGAGGAAAATCTCTGGTAGAAGCCCTACGTAGTACATTAGCGCAGCACTCACTATTTGCTACTCCAGTATaGATTGGCAACATGGTGAAA +
Preference number: 5 (lower is better)
Translates to: RGKSLVEALRSTLAQHSLFATPV*IGNMVK
Trigger: TTTCACCATGTTGCCAATCAATACTGGAGTAGCAAA...TAGTGAGTGCTGCGCTAATGTACTACGTAGGGCTTCTACCAGAGATTTTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CAA 90 bp AATCCCCGATGCAGGCTTTTGGAAGAGTATTTCACAACCCAATTGGAGAGGAAAGAACTATTGCAAGTCTaGTTGTATTTGCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: NPRCRLLEEYFTTQLERKELLQV*LYLLFS
Trigger: GGAGAACAGCAAATACAACAAGACTTGCAATAGTTC...TTTCCTCTCCAATTGGGTTGTGAAATACTCTTCCAAAAGCCTGCATCGGGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TTACAGTTGCTTATTAACTATGCTCTTCACCCTCCGTTACGCTGTTTCACACGCGAACTATTGCAAGTCTaGTTGTATTTGCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: LQLLINYALHPPLRCFTRELLQV*LYLLFS
Trigger: GGAGAACAGCAAATACAACAAGACTTGCAATAGTTC...GCGTGTGAAACAGCGTAACGGAGGGTGAAGAGCATAGTTAATAAGCAACTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp TGGCTTGGAAGTCACAGAACTGCAGCAGAGCTATTATACAATTCATTTACAGTCGTGAATGCCATCCTTTaGATGAGGATCCAAAGGGTA +
Preference number: 5 (lower is better)
Translates to: WLGSHRTAAELLYNSFTVVNAIL*MRIQRV
Trigger: TACCCTTTGGATCCTCATCAAAAGGATGGCATTCAC...GACTGTAAATGAATTGTATAATAGCTCTGCTGCAGTTCTGTGACTTCCAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CAA 90 bp AGAATTGCTTTGCCTCTTTTTGGAATGGCTAAGAAAGACTGTGTGGTTAATATTCTTGACATCGGGAGATaGGAGCTTGATTGTGATGCC +
Preference number: 5 (lower is better)
Translates to: RIALPLFGMAKKDCVVNILDIGR*ELDCDA
Trigger: GGCATCACAATCAAGCTCCAATCTCCCGATGTCAAG...AATATTAACCACACAGTCTTTCTTAGCCATTCCAAAAAGAGGCAAAGCAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CAA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGATGCTGCCAAAATTCTaGAAACCAAGGGTTTCGGTG +
Preference number: 5 (lower is better)
Translates to: NLPLVFLVNGGESEISRWMLPKF*KPRVSV
Trigger: CACCGAAACCCTTGGTTTCAAGAATTTTGGCAGCAT...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp AGAATTGCTTTGCCTCTTTTTGGAATGGCTAAGAAAGACTGTGTGGTTAATATTGGGTTTTCTTTCTTGTaGATGTGGATGGACAGGCGC +
Preference number: 5 (lower is better)
Translates to: RIALPLFGMAKKDCVVNIGFSFL*MWMDRR
Trigger: GCGCCTGTCCATCCACATCAACAAGAAAGAAAACCC...AATATTAACCACACAGTCTTTCTTAGCCATTCCAAAAAGAGGCAAAGCAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CAA 90 bp ATGAGTGGACTGCTTAGATTAGTCAGTATAACTTGGTTAAACCACGTCTTCTTCCAAGTCTTGTTGTATTaGCTGTTCTCCTGTGGAAAC +
Preference number: 5 (lower is better)
Translates to: MSGLLRLVSITWLNHVFFQVLLY*LFSCGN
Trigger: GTTTCCACAGGAGAACAGCAAATACAACAAGACTTG...GAAGAAGACGTGGTTTAACCAAGTTATACTGACTAATCTAAGCAGTCCACTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CAA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGCTTCCACTGGTTTTCTaGGTTAATGGAGGTGAATCT +
Preference number: 5 (lower is better)
Translates to: NLPLVFLVNGGESEISRWLPLVF*VNGGES
Trigger: AGATTCACCTCCATTAACCAAGAAAACCAGTGGAAG...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp AATCTTCCACTGGTTTTCTTGGTTAATGGAGGTGAATCTGAAATAAGTAGGTGGTATTTCACAACCCAATaGGAGAGGAAAATCTCTGGT +
Preference number: 5 (lower is better)
Translates to: NLPLVFLVNGGESEISRWYFTTQ*ERKISG
Trigger: ACCAGAGATTTTCCTCTCCAATTGGGTTGTGAAATA...CCACCTACTTATTTCAGATTCACCTCCATTAACCAAGAAAACCAGTGGAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305432.9
ENST00000455756.6
CDS-3UTR CAA 90 bp AATGGAAGGATGAGTGGACTGCTTAGATTAGTCAGTATAACTTGGTTAAACCACGGTAACAGCAGTAGTTaGGGAAAGATAGTTACTTTC +
Preference number: 5 (lower is better)
Translates to: NGRMSGLLRLVSITWLNHGNSSS*GKIVTF
Trigger: GAAAGTAACTATCTTTCCCAAACTACTGCTGTTACC...GTGGTTTAACCAAGTTATACTGACTAATCTAAGCAGTCCACTCATCCTTCCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CAA 90 bp AATGGAAGGATGAGTGGACTGCTTAGATTAGTCAGTATAACTTGGTTAAACCACAGAGATTCTGACAGCTaGAGGGTTATTAATAAGCTG +
Preference number: 5 (lower is better)
Translates to: NGRMSGLLRLVSITWLNHRDSDS*RVINKL
Trigger: CAGCTTATTAATAACCCTCAAGCTGTCAGAATCTCT...GTGGTTTAACCAAGTTATACTGACTAATCTAAGCAGTCCACTCATCCTTCCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CAA 90 bp CAGCAGAGCTATTATACAATTCATTTACAGTCAGAAATAGCTCCTAGTCTTCCTCATCAGCAGCTGCCATaGATTTCTAGAAATACACAC +
Preference number: 5 (lower is better)
Translates to: QQSYYTIHLQSEIAPSLPHQQLP*ISRNTH
Trigger: GTGTGTATTTCTAGAAATCAATGGCAGCTGCTGATG...AGGAAGACTAGGAGCTATTTCTGACTGTAAATGAATTGTATAATAGCTCTGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS-3UTR CAA 90 bp AGAATTGCTTTGCCTCTTTTTGGAATGGCTAAGAAAGACTGTGTGGTTAATATTACAGATCTGATGATGTaGCTTTTCTTGGACCATACT +
Preference number: 5 (lower is better)
Translates to: RIALPLFGMAKKDCVVNITDLMM*LFLDHT
Trigger: AGTATGGTCCAAGAAAAGCAACATCATCAGATCTGT...AATATTAACCACACAGTCTTTCTTAGCCATTCCAAAAAGAGGCAAAGCAATTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455756.6
CDS CAA 90 bp GGCGCCGGGAAGTGCTCCTCAGCCTCGGCCACATCATACAGCGCCTaGGGGCCGGCGTCTGGGGACTCGGGCCCGCCTGGGCCGGCGCCT +
Preference number: 6 (lower is better)
Translates to: GAGKCSSASATSYSA*GPASGDSGPPGPAP
Trigger: AGGCGCCGGCCCAGGCGGGCCCGAGTCCCCAGACGCCGGCCCCAAGGCGCTGTATGATGTGGCCGAGGCTGAGGAGCACTTCCCGGCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CCA 72 bp CTCGGCCACATCATACAGCGCCTTGGGGCCGGCGTCTaGGGACTCGGGCCCGCCTGGGCCGGCGCCTGCGCA +
Preference number: 6 (lower is better)
Translates to: LGHIIQRLGAGV*GLGPAWAGACA
Trigger: TGCGCAGGCGCCGGCCCAGGCGGGCCCGAGTCCCCAGACGCCGGCCCCAAGGCGCTGTATGATGTGGCCGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CCA 72 bp ACATCGTCGTCCGTGCGGCTGGCCGAGCCCGCGCGGTaGCTCAGCGTGCTGATGGGCGACGGTGAGCGCGGC +
Preference number: 6 (lower is better)
Translates to: TSSSVRLAEPAR*LSVLMGDGERG
Trigger: GCCGCGCTCACCGTCGCCCATCAGCACGCTGAGCCACCGCGCGGGCTCGGCCAGCCGCACGGACGACGATGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS GCA 72 bp GGCGACGGTGAGCGCGGCCGCGCGGGCGCCGGGAAGTaGTCCTCAGCCTCGGCCACATCATACAGCGCCTTG +
Preference number: 6 (lower is better)
Translates to: GDGERGRAGAGK*SSASATSYSAL
Trigger: CAAGGCGCTGTATGATGTGGCCGAGGCTGAGGAGCACTTCCCGGCGCCCGCGCGGCCGCGCTCACCGTCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CAA 72 bp AAGTGCTCCTCAGCCTCGGCCACATCATACAGCGCCTaGGGGCCGGCGTCTGGGGACTCGGGCCCGCCTGGG +
Preference number: 6 (lower is better)
Translates to: KCSSASATSYSA*GPASGDSGPPG
Trigger: CCCAGGCGGGCCCGAGTCCCCAGACGCCGGCCCCAAGGCGCTGTATGATGTGGCCGAGGCTGAGGAGCACTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CAA 90 bp GCGCCGACGCCGGGGCTGGGGGCCGCGGTGGACAGCATCATGGAGTaGAGCTCGCTGATGTTGGCCGTGAAGCGGGTGACCACACTGCTG +
Preference number: 6 (lower is better)
Translates to: APTPGLGAAVDSIME*SSLMLAVKRVTTLL
Trigger: CAGCAGTGTGGTCACCCGCTTCACGGCCAACATCAGCGAGCTCAACTCCATGATGCTGTCCACCGCGGCCCCCAGCCCCGGCGTCGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CCA 72 bp TGCGCGCCTCCCGTGACTTCGATGGCCGGCAGAGGCTaGATTTCGGCAAAGGTCGTCATGGTCGTGGGCAAC +
Preference number: 6 (lower is better)
Translates to: CAPPVTSMAGRG*ISAKVVMVVGN
Trigger: GTTGCCCACGACCATGACGACCTTTGCCGAAATCCAGCCTCTGCCGGCCATCGAAGTCACGGGAGGCGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CAA 90 bp CTGGGGGCCGCGGTGGACAGCATCATGGAGTTGAGCTCGCTGATGTaGGCCGTGAAGCGGGTGACCACACTGCTGATCTGCTCCATGAGG +
Preference number: 6 (lower is better)
Translates to: LGAAVDSIMELSSLM*AVKRVTTLLICSMR
Trigger: CCTCATGGAGCAGATCAGCAGTGTGGTCACCCGCTTCACGGCCAACATCAGCGAGCTCAACTCCATGATGCTGTCCACCGCGGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS GCA 72 bp TTGTTGATGTGGATGGACAGGCGCTGCCACAGGTGCTaGCCCCGGCTGCTCTTCTCATTCTGGGCCCACGTG +
Preference number: 6 (lower is better)
Translates to: LLMWMDRRCHRC*PRLLFSFWAHV
Trigger: CACGTGGGCCCAGAATGAGAAGAGCAGCCGGGGGCAGCACCTGTGGCAGCGCCTGTCCATCCACATCAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS GCA 72 bp TTCTTGTTGATGTGGATGGACAGGCGCTGCCACAGGTaGTGCCCCCGGCTGCTCTTCTCATTCTGGGCCCAC +
Preference number: 6 (lower is better)
Translates to: FLLMWMDRRCHR*CPRLLFSFWAH
Trigger: GTGGGCCCAGAATGAGAAGAGCAGCCGGGGGCAGCACCTGTGGCAGCGCCTGTCCATCCACATCAACAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CCA 72 bp CAAAGGTCGTCATGGTCGTGGGCAACTGGATCTCTTTaGGGATCAGGTAGGACGAGCAGAGCGGGGCGCCGA +
Preference number: 6 (lower is better)
Translates to: QRSSWSWATGSL*GSGRTSRAGRR
Trigger: TCGGCGCCCCGCTCTGCTCGTCCTACCTGATCCCCAAAGAGATCCAGTTGCCCACGACCATGACGACCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS TCA 72 bp AGGTTTCCCCAGAGGAGCCCCTTCTCTTCCACAGGTTaGCTAGGCTGCTGGATCTGCTGGCTGCGGAGGATG +
Preference number: 6 (lower is better)
Translates to: RFPQRSPFSSTG*LGCWICWLRRM
Trigger: CATCCTCCGCAGCCAGCAGATCCAGCAGCCTAGTCAACCTGTGGAAGAGAAGGGGCTCCTCTGGGGAAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CAA 72 bp GCGGTGGACAGCATCATGGAGTTGAGCTCGCTGATGTaGGCCGTGAAGCGGGTGACCACACTGCTGATCTGC +
Preference number: 6 (lower is better)
Translates to: AVDSIMELSSLM*AVKRVTTLLIC
Trigger: GCAGATCAGCAGTGTGGTCACCCGCTTCACGGCCAACATCAGCGAGCTCAACTCCATGATGCTGTCCACCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CCA 72 bp TGGCCGGCAGAGGCTGGATTTCGGCAAAGGTCGTCATaGTCGTGGGCAACTGGATCTCTTTGGGGATCAGGT +
Preference number: 6 (lower is better)
Translates to: WPAEAGFRQRSS*SWATGSLWGSG
Trigger: ACCTGATCCCCAAAGAGATCCAGTTGCCCACGACCATGACGACCTTTGCCGAAATCCAGCCTCTGCCGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS TCA 72 bp AGGCGCTGCGCACGTTTCTCTCTGGTTTGGCCAGGATaGTGTACACCTTCGGCACAAACATGCAGCCTAGGG +
Preference number: 6 (lower is better)
Translates to: RRCARFSLVWPG*CTPSAQTCSLG
Trigger: CCCTAGGCTGCATGTTTGTGCCGAAGGTGTACATCATCCTGGCCAAACCAGAGAGAAACGTGCGCAGCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS TCA 72 bp GCTGCCCCCGGCTGCTCTTCTCATTCTGGGCCCACGTaGCGGATTTTCCATTGGAACTGCTCATTGTTGCTC +
Preference number: 6 (lower is better)
Translates to: AAPGCSSHSGPT*RIFHWNCSLLL
Trigger: GAGCAACAATGAGCAGTTCCAATGGAAAATCCGTCACGTGGGCCCAGAATGAGAAGAGCAGCCGGGGGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305447.5
CDS CCA 72 bp GCAGAGGCTGGATTTCGGCAAAGGTCGTCATGGTCGTaGGCAACTGGATCTCTTTGGGGATCAGGTAGGACG +
Preference number: 6 (lower is better)
Translates to: AEAGFRQRSSWS*ATGSLWGSGRT
Trigger: CGTCCTACCTGATCCCCAAAGAGATCCAGTTGCCCACGACCATGACGACCTTTGCCGAAATCCAGCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CCA 72 bp GGGACTCCAAAAGTTTCCGTCCATCAATTGGCTTCATaGCATCACAGAGTCCTGCATAGCCTGGGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: GTPKVSVHQLAS*HHRVLHSLGRG
Trigger: CCCTCTGCCCAGGCTATGCAGGACTCTGTGATGCCATGAAGCCAATTGATGGACGGAAACTTTTGGAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CAA 90 bp TGGAAACCCTTCCAGTCGGCACTGAAAACGATGCTGCCAAAATTCTaGAAACCAAGGGTTTCGGTGGTTTGTTTCTGGCCGGAGCTTCAG +
Preference number: 6 (lower is better)
Translates to: WKPFQSALKTMLPKF*KPRVSVVCFWPELQ
Trigger: CTGAAGCTCCGGCCAGAAACAAACCACCGAAACCCTTGGTTTCAAGAATTTTGGCAGCATCGTTTTCAGTGCCGACTGGAAGGGTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS TCA 72 bp TGGAGCTTGATTGTGATGCCACCAACAGCTTCTCGCTaGTATCCATCTGTCACATCATACCTGTCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: WSLIVMPPTASR*YPSVTSYLSAQ
Trigger: CTGGGCTGACAGGTATGATGTGACAGATGGATATCAGCGAGAAGCTGTTGGTGGCATCACAATCAAGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CCA 72 bp AATGGGTTCAGGGTCACCCCATCGAAGATACTGTACTaGGATCAAGTCACAACCTGTGAGATCATCAGTGGG +
Preference number: 6 (lower is better)
Translates to: NGFRVTPSKILY*DQVTTCEIISG
Trigger: CCCACTGATGATCTCACAGGTTGTGACTTGATCCCAGTACAGTATCTTCGATGGGGTGACCCTGAACCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS TCA 72 bp TCTGAAGGTAGCAGTAAATCTGTTTGGGCTTCGCAATaGGGCAGAAGGTACATAAGTAGCCCAGGCAGATGC +
Preference number: 6 (lower is better)
Translates to: SEGSSKSVWASQ*GRRYISSPGRC
Trigger: GCATCTGCCTGGGCTACTTATGTACCTTCTGCCTCATTGCGAAGCCCAAACAGATTTACTGCTACCTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS GCA 72 bp GATCATCAGTGGGCCAAGACCCCAGTTGGCATGCCTTaGATGTGTACTCATCAAAGACATACTCATTCTCCT +
Preference number: 6 (lower is better)
Translates to: DHQWAKTPVGMP*MCTHQRHTHSP
Trigger: AGGAGAATGAGTATGTCTTTGATGAGTACACATGCAAGGCATGCCAACTGGGGTCTTGGCCCACTGATGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CCA 72 bp TTTCATCAGGGACTCCAAAAGTTTCCGTCCATCAATTaGCTTCATGGCATCACAGAGTCCTGCATAGCCTGG +
Preference number: 6 (lower is better)
Translates to: FHQGLQKFPSIN*LHGITESCIAW
Trigger: CCAGGCTATGCAGGACTCTGTGATGCCATGAAGCCAATTGATGGACGGAAACTTTTGGAGTCCCTGATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CAA 72 bp TTCCAGTCGGCACTGAAAACGATGCTGCCAAAATTCTaGAAACCAAGGGTTTCGGTGGTTTGTTTCTGGCCG +
Preference number: 6 (lower is better)
Translates to: FQSALKTMLPKF*KPRVSVVCFWP
Trigger: CGGCCAGAAACAAACCACCGAAACCCTTGGTTTCAAGAATTTTGGCAGCATCGTTTTCAGTGCCGACTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CAA 72 bp AGATCATCAGTGGGCCAAGACCCCAGTTGGCATGCCTaGCATGTGTACTCATCAAAGACATACTCATTCTCC +
Preference number: 6 (lower is better)
Translates to: RSSVGQDPSWHA*HVYSSKTYSFS
Trigger: GGAGAATGAGTATGTCTTTGATGAGTACACATGCAAGGCATGCCAACTGGGGTCTTGGCCCACTGATGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CAA 72 bp ACAACCTGTGAGATCATCAGTGGGCCAAGACCCCAGTaGGCATGCCTTGCATGTGTACTCATCAAAGACATA +
Preference number: 6 (lower is better)
Translates to: TTCEIISGPRPQ*ACLACVLIKDI
Trigger: TATGTCTTTGATGAGTACACATGCAAGGCATGCCAACTGGGGTCTTGGCCCACTGATGATCTCACAGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CAA 90 bp CAACCTGTGAGATCATCAGTGGGCCAAGACCCCAGTTGGCATGCCTaGCATGTGTACTCATCAAAGACATACTCATTCTCCTTACAAGGT +
Preference number: 6 (lower is better)
Translates to: QPVRSSVGQDPSWHA*HVYSSKTYSFSLQG
Trigger: ACCTTGTAAGGAGAATGAGTATGTCTTTGATGAGTACACATGCAAGGCATGCCAACTGGGGTCTTGGCCCACTGATGATCTCACAGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CAA 90 bp GATCAAGTCACAACCTGTGAGATCATCAGTGGGCCAAGACCCCAGTaGGCATGCCTTGCATGTGTACTCATCAAAGACATACTCATTCTC +
Preference number: 6 (lower is better)
Translates to: DQVTTCEIISGPRPQ*ACLACVLIKDILIL
Trigger: GAGAATGAGTATGTCTTTGATGAGTACACATGCAAGGCATGCCAACTGGGGTCTTGGCCCACTGATGATCTCACAGGTTGTGACTTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS GCA 72 bp TGTGAGATCATCAGTGGGCCAAGACCCCAGTTGGCATaGCTTGCATGTGTACTCATCAAAGACATACTCATT +
Preference number: 6 (lower is better)
Translates to: CEIISGPRPQLA*LACVLIKDILI
Trigger: AATGAGTATGTCTTTGATGAGTACACATGCAAGGCATGCCAACTGGGGTCTTGGCCCACTGATGATCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS GCA 72 bp TCAGAGTCAGAGAACTATTGCAAGTCTTGTTGTATTTaGTGTTCTCCTGTGGAAACCCTTCCAGTCGGCACT +
Preference number: 6 (lower is better)
Translates to: SESENYCKSCCI*CSPVETLPVGT
Trigger: AGTGCCGACTGGAAGGGTTTCCACAGGAGAACAGCAAATACAACAAGACTTGCAATAGTTCTCTGACTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CCA 72 bp TCCCTTTCGGATCACCTTGATCTGGCCTTTCTCACATaGTTCACTGCACACAGATCTGATGATGTTGCTTTT +
Preference number: 6 (lower is better)
Translates to: SLSDHLDLAFLT*FTAHRSDDVAF
Trigger: AAAAGCAACATCATCAGATCTGTGTGCAGTGAACCATGTGAGAAAGGCCAGATCAAGGTGATCCGAAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CCA 72 bp GGCTCCATTATAAAGAGGGCAACGATGATGCCCAACTaGATGCATATGAGAATGAAAGCAATCACTAGCTGG +
Preference number: 6 (lower is better)
Translates to: GSIIKRATMMPN*MHMRMKAITSW
Trigger: CCAGCTAGTGATTGCTTTCATTCTCATATGCATCCAGTTGGGCATCATCGTTGCCCTCTTTATAATGGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CAA 72 bp TTCAGAGTCAGAGAACTATTGCAAGTCTTGTTGTATTaGCTGTTCTCCTGTGGAAACCCTTCCAGTCGGCAC +
Preference number: 6 (lower is better)
Translates to: FRVRELLQVLLY*LFSCGNPSSRH
Trigger: GTGCCGACTGGAAGGGTTTCCACAGGAGAACAGCAAATACAACAAGACTTGCAATAGTTCTCTGACTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CAA 72 bp TGGTGGTGTTACAGATCAGGTAGACTTCTCGAATGCTaGGGTAGTCATGCATTATGTCAGGAGGCTCCATTA +
Preference number: 6 (lower is better)
Translates to: WWCYRSGRLLEC*GSHALCQEAPL
Trigger: TAATGGAGCCTCCTGACATAATGCATGACTACCCAAGCATTCGAGAAGTCTACCTGATCTGTAACACCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS TCA 72 bp AGCTCAAAATCAACAATCCATTGTATCCAAGTGGAGTaGCAACTCCTAGGTTGGTGGTGTTACAGATCAGGT +
Preference number: 6 (lower is better)
Translates to: SSKSTIHCIQVE*QLLGWWCYRSG
Trigger: ACCTGATCTGTAACACCACCAACCTAGGAGTTGTCACTCCACTTGGATACAATGGATTGTTGATTTTGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CCA 72 bp AAATTCTTGAAACCAAGGGTTTCGGTGGTTTGTTTCTaGCCGGAGCTTCAGATAATAATCATCAAACCACTT +
Preference number: 6 (lower is better)
Translates to: KFLKPRVSVVCF*PELQIIIIKPL
Trigger: AAGTGGTTTGATGATTATTATCTGAAGCTCCGGCCAGAAACAAACCACCGAAACCCTTGGTTTCAAGAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6
CDS CAA 90 bp ATCTGGCCTTTCTCACATGGTTCACTGCACACAGATCTGATGATGTaGCTTTTCTTGGACCATACTTCATCATCATCCATTTTTAATTCT +
Preference number: 6 (lower is better)
Translates to: IWPFSHGSLHTDLMM*LFLDHTSSSSIFNS
Trigger: AGAATTAAAAATGGATGATGATGAAGTATGGTCCAAGAAAAGCAACATCATCAGATCTGTGTGCAGTGAACCATGTGAGAAAGGCCAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305432.9
ENST00000305447.5
ENST00000455756.6