RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000100077

Ensembl transcript IDs: ENST00000324198.11, ENST00000455558.2, ENST00000619906.4

Found 389 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCTGAGACCCTGGTGTGTCCTCCTCGAGGACCCTCCCTGTTTCTaGGTGCTAGAGGCCGTTGCTGTTTCTGTGACAGAGGGATGGCTT +
Preference number: 1 (lower is better)
Translates to: RLRPWCVLLEDPPCF*VLEAVAVSVTEGWL
Trigger: AAGCCATCCCTCTGTCACAGAAACAGCAACGGCCTCTAGCACCCAGAAACAGGGAGGGTCCTCGAGGAGGACACACCAGGGTCTCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR TCA 90 bp GTAAAAACGGTGGTGCTGACGGTGGTGTGCCCCACACAGGGCAGGTaGCCTCAGACGTGGAGCAGCATCTCCCGTGGGATACTATTTCAG +
Preference number: 1 (lower is better)
Translates to: VKTVVLTVVCPTQGR*PQTWSSISRGILFQ
Trigger: CTGAAATAGTATCCCACGGGAGATGCTGCTCCACGTCTGAGGTCACCTGCCCTGTGTGGGGCACACCACCGTCAGCACCACCGTTTTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR GCA 90 bp TGTCCTCCTCGAGGACCCTCCCTGTTTCTGGGTGCTAGAGGCCGTTaGTGTTTCTGTGACAGAGGGATGGCTTTGGGAGCTCCACAGTAC +
Preference number: 1 (lower is better)
Translates to: CPPRGPSLFLGARGR*CFCDRGMALGAPQY
Trigger: GTACTGTGGAGCTCCCAAAGCCATCCCTCTGTCACAGAAACAGCAACGGCCTCTAGCACCCAGAAACAGGGAGGGTCCTCGAGGAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR TCA 90 bp TCTTCAGTAGTTTCTAATGCAGACAAATGTGACAAGGCAGGGAGCTaGGCTGACCCCAAGCCGAAGGGTCCCGACTCCTCTCGGGAGCCT +
Preference number: 1 (lower is better)
Translates to: SSVVSNADKCDKAGS*ADPKPKGPDSSREP
Trigger: AGGCTCCCGAGAGGAGTCGGGACCCTTCGGCTTGGGGTCAGCTCAGCTCCCTGCCTTGTCACATTTGTCTGCATTAGAAACTACTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR CCA 90 bp TGGCCATGCAGGCAACCGGGTGCAGACACAGCGGTATCCTGTGTCTaGTCGCAGAAACACCTCCATCACAACATTTTGGCAGAAGGCACT +
Preference number: 1 (lower is better)
Translates to: WPCRQPGADTAVSCV*SQKHLHHNILAEGT
Trigger: AGTGCCTTCTGCCAAAATGTTGTGATGGAGGTGTTTCTGCGACCAGACACAGGATACCGCTGTGTCTGCACCCGGTTGCCTGCATGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CCA 90 bp GACCGAGGTTTGTTGAGGAACTTCGGGGCACGACGCAATAGCCGCTaGGCCTCCTTGAAGGTTTCGTTCAACTCTTTCTTCCACTGCACA +
Preference number: 1 (lower is better)
Translates to: DRGLLRNFGARRNSR*ASLKVSFNSFFHCT
Trigger: TGTGCAGTGGAAGAAAGAGTTGAACGAAACCTTCAAGGAGGCCCAGCGGCTATTGCGTCGTGCCCCGAAGTTCCTCAACAAACCTCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR GCA 90 bp TGTTTAATCCAACTGACTTTTCCTCTGGCCATGCAGGCAACCGGGTaGAGACACAGCGGTATCCTGTGTCTGGTCGCAGAAACACCTCCA +
Preference number: 1 (lower is better)
Translates to: CLIQLTFPLAMQATG*RHSGILCLVAETPP
Trigger: TGGAGGTGTTTCTGCGACCAGACACAGGATACCGCTGTGTCTGCACCCGGTTGCCTGCATGGCCAGAGGAAAAGTCAGTTGGATTAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR GCA 90 bp AATGCATTCACAGTGATCCAGACACTGCCTCTCCACCTCGGGGGCTaGAAAGTGCACACACACACACACACACACACACACACACACACA +
Preference number: 1 (lower is better)
Translates to: NAFTVIQTLPLHLGG*KVHTHTHTHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACTTTGCAGCCCCCGAGGTGGAGAGGCAGTGTCTGGATCACTGTGAATGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CCA 90 bp TCACGCCCTAGGTACGAGATATTAGACGCTAAGCCCAGACCCTGGTaGAGTCAACAGCAGGCCCTTTATCCTGGAGATCTAGAACAGGCA +
Preference number: 1 (lower is better)
Translates to: SRPRYEILDAKPRPW*SQQQALYPGDLEQA
Trigger: TGCCTGTTCTAGATCTCCAGGATAAAGGGCCTGCTGTTGACTCCACCAGGGTCTGGGCTTAGCGTCTAATATCTCGTACCTAGGGCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CCA 90 bp AGCTCACGCCCTAGGTACGAGATATTAGACGCTAAGCCCAGACCCTaGTGGAGTCAACAGCAGGCCCTTTATCCTGGAGATCTAGAACAG +
Preference number: 1 (lower is better)
Translates to: SSRPRYEILDAKPRP*WSQQQALYPGDLEQ
Trigger: CTGTTCTAGATCTCCAGGATAAAGGGCCTGCTGTTGACTCCACCAGGGTCTGGGCTTAGCGTCTAATATCTCGTACCTAGGGCGTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CCA 90 bp CGGTATCCTGTGTCTGGTCGCAGAAACACCTCCATCACAACATTTTaGCAGAAGGCACTCAAACCAGACCCCAACACAACTGGTGACCGC +
Preference number: 1 (lower is better)
Translates to: RYPVSGRRNTSITTF*QKALKPDPNTTGDR
Trigger: GCGGTCACCAGTTGTGTTGGGGTCTGGTTTGAGTGCCTTCTGCCAAAATGTTGTGATGGAGGTGTTTCTGCGACCAGACACAGGATACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR TCA 90 bp GAGGTAGATGAAAGCAGTATTTCACAGCAGGTGTGCTGCCCGACGTaGCGAAAGACATGCATGCGCCTCTCAGCACAGACCAGAAGATCA +
Preference number: 1 (lower is better)
Translates to: EVDESSISQQVCCPT*RKTCMRLSAQTRRS
Trigger: TGATCTTCTGGTCTGTGCTGAGAGGCGCATGCATGTCTTTCGTCACGTCGGGCAGCACACCTGCTGTGAAATACTGCTTTCATCTACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CCA 90 bp TACCAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATaGGGCAATGCATTCACAGTGATCCAGACACTGCCTCTCCACCTC +
Preference number: 1 (lower is better)
Translates to: YQDFSGFVTVSPTDQ*GNAFTVIQTLPLHL
Trigger: GAGGTGGAGAGGCAGTGTCTGGATCACTGTGAATGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR GCA 90 bp GTATTTCACAGCAGGTGTGCTGCCCGACGTGACGAAAGACATGCATaGGCCTCTCAGCACAGACCAGAAGATCAACTGTTGTTGAAAACA +
Preference number: 1 (lower is better)
Translates to: VFHSRCAARRDERHA*ASQHRPEDQLLLKT
Trigger: TGTTTTCAACAACAGTTGATCTTCTGGTCTGTGCTGAGAGGCGCATGCATGTCTTTCGTCACGTCGGGCAGCACACCTGCTGTGAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR TCA 90 bp CACCGTGGAAGTGAGCAGGGTAGAACAGAAGAGGCCTGTTACTCTTaGCAGTTTTACCAGGACTTCAGTGGATTTGTAACAGTGTCCCCA +
Preference number: 1 (lower is better)
Translates to: HRGSEQGRTEEACYS*QFYQDFSGFVTVSP
Trigger: TGGGGACACTGTTACAAATCCACTGAAGTCCTGGTAAAACTGTCAAGAGTAACAGGCCTCTTCTGTTCTACCCTGCTCACTTCCACGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR TCA 90 bp GACATGCATGCGCCTCTCAGCACAGACCAGAAGATCAACTGTTGTTaGAAACAGTCCATGGTGGTGAGAAGAGATGTCGGCCACATTACT +
Preference number: 1 (lower is better)
Translates to: DMHAPLSTDQKINCC*KQSMVVRRDVGHIT
Trigger: AGTAATGTGGCCGACATCTCTTCTCACCACCATGGACTGTTTTCAACAACAGTTGATCTTCTGGTCTGTGCTGAGAGGCGCATGCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR GCA 90 bp CCTCAGACGTGGAGCAGCATCTCCCGTGGGATACTATTTCAGACGTaGACTAGTGAGTGTATACTGAGAAGGGATTATAAACCTTCCCTG +
Preference number: 1 (lower is better)
Translates to: PQTWSSISRGILFQT*TSECILRRDYKPSL
Trigger: CAGGGAAGGTTTATAATCCCTTCTCAGTATACACTCACTAGTGCACGTCTGAAATAGTATCCCACGGGAGATGCTGCTCCACGTCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CCA 90 bp TTCCTGTTTTCCCTGTGCAGAACCCGACTCCAGAGTCAGAAAAGCTaGGTTCAAGTTGTGACTTGTTGGTTTAGTGACTGTCAGCCACAT +
Preference number: 1 (lower is better)
Translates to: FLFSLCRTRLQSQKS*VQVVTCWFSDCQPH
Trigger: ATGTGGCTGACAGTCACTAAACCAACAAGTCACAACTTGAACCCAGCTTTTCTGACTCTGGAGTCGGGTTCTGCACAGGGAAAACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR TCA 90 bp AACATTTTGGCAGAAGGCACTCAAACCAGACCCCAACACAACTGGTaGCCGCCCTCAGAAACAGCTCAATCTAGTCTTACAAAGCACTTT +
Preference number: 1 (lower is better)
Translates to: NILAEGTQTRPQHNW*PPSETAQSSLTKHF
Trigger: AAAGTGCTTTGTAAGACTAGATTGAGCTGTTTCTGAGGGCGGTCACCAGTTGTGTTGGGGTCTGGTTTGAGTGCCTTCTGCCAAAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR TCA 90 bp TGTGCAGAACCCGACTCCAGAGTCAGAAAAGCTGGGTTCAAGTTGTaGCTTGTTGGTTTAGTGACTGTCAGCCACATAGAAACCTTCAGT +
Preference number: 1 (lower is better)
Translates to: CAEPDSRVRKAGFKL*LVGLVTVSHIETFS
Trigger: ACTGAAGGTTTCTATGTGGCTGACAGTCACTAAACCAACAAGTCACAACTTGAACCCAGCTTTTCTGACTCTGGAGTCGGGTTCTGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR TCA 90 bp CCCTCACTCAGGGTGGGAGGTGTTAATTCATCAAGCATCTCTGAATaGCACAGAAACATTTCCCTGAACGTAACTGAGACAACACTGCAT +
Preference number: 1 (lower is better)
Translates to: PSLRVGGVNSSSISE*HRNISLNVTETTLH
Trigger: ATGCAGTGTTGTCTCAGTTACGTTCAGGGAAATGTTTCTGTGTCATTCAGAGATGCTTGATGAATTAACACCTCCCACCCTGAGTGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR TCA 90 bp TCTCCCGTGGGATACTATTTCAGACGTGCACTAGTGAGTGTATACTaGGAAGGGATTATAAACCTTCCCTGGCACAACAGATACAAAAAG +
Preference number: 1 (lower is better)
Translates to: SPVGYYFRRALVSVY*EGIINLPWHNRYKK
Trigger: CTTTTTGTATCTGTTGTGCCAGGGAAGGTTTATAATCCCTTCTCAGTATACACTCACTAGTGCACGTCTGAAATAGTATCCCACGGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR GCA 90 bp AAGCTACATCTTGTTTGCAACAAACAGACCATTGTTTGTTGCTGCTaGTGTCTTCAGCAAAATGCTTCCTTTCCTCAGTGCATCTCACTG +
Preference number: 1 (lower is better)
Translates to: KLHLVCNKQTIVCCC*CLQQNASFPQCISL
Trigger: CAGTGAGATGCACTGAGGAAAGGAAGCATTTTGCTGAAGACAGCAGCAGCAACAAACAATGGTCTGTTTGTTGCAAACAAGATGTAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CCA 90 bp GCAGAGGCAAAAGAACTTCTTCAGAAAGTCCTGATAGGCAGCAAATaGCTTCTGAATGAGTTCAGCAGCTCCACATTCAAAAACAAAGTG +
Preference number: 1 (lower is better)
Translates to: AEAKELLQKVLIGSK*LLNEFSSSTFKNKV
Trigger: CACTTTGTTTTTGAATGTGGAGCTGCTGAACTCATTCAGAAGCCATTTGCTGCCTATCAGGACTTTCTGAAGAAGTTCTTTTGCCTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR TCA 90 bp GCACAGACCAGAAGATCAACTGTTGTTGAAAACAGTCCATGGTGGTaGGAAGAGATGTCGGCCACATTACTAGGTGCATTATTTCAATTT +
Preference number: 1 (lower is better)
Translates to: AQTRRSTVVENSPWW*EEMSATLLGALFQF
Trigger: AAATTGAAATAATGCACCTAGTAATGTGGCCGACATCTCTTCTCACCACCATGGACTGTTTTCAACAACAGTTGATCTTCTGGTCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR TCA 90 bp GGTTCTGAGGGAATGACACTGCAAAGTCTTACAGAAATCCTTTTATaGGATAGCCAGTCCAGAATAAAGCCTTTGCGGTACTTGTCAACA +
Preference number: 1 (lower is better)
Translates to: GSEGMTLQSLTEILL*DSQSRIKPLRYLST
Trigger: TGTTGACAAGTACCGCAAAGGCTTTATTCTGGACTGGCTATCTCATAAAAGGATTTCTGTAAGACTTTGCAGTGTCATTCCCTCAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR GCA 90 bp ATCAAGCTACATCTTGTTTGCAACAAACAGACCATTGTTTGTTGCTaGTGCTGTCTTCAGCAAAATGCTTCCTTTCCTCAGTGCATCTCA +
Preference number: 1 (lower is better)
Translates to: IKLHLVCNKQTIVCC*CCLQQNASFPQCIS
Trigger: TGAGATGCACTGAGGAAAGGAAGCATTTTGCTGAAGACAGCAGCAGCAACAAACAATGGTCTGTTTGTTGCAAACAAGATGTAGCTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR GCA 90 bp GAAATCAAGCTACATCTTGTTTGCAACAAACAGACCATTGTTTGTTaGTGCTGCTGTCTTCAGCAAAATGCTTCCTTTCCTCAGTGCATC +
Preference number: 1 (lower is better)
Translates to: EIKLHLVCNKQTIVC*CCCLQQNASFPQCI
Trigger: GATGCACTGAGGAAAGGAAGCATTTTGCTGAAGACAGCAGCAGCAACAAACAATGGTCTGTTTGTTGCAAACAAGATGTAGCTTGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR GCA 90 bp TTGCTTATTTTTAGCTCTCTTCCTGGCCTCGATTTTATCTGTGTCTaGATTTACTGCTTCATAAACTGTTTCCGTTACTTCTTGCTGCCA +
Preference number: 1 (lower is better)
Translates to: LLIFSSLPGLDFICV*IYCFINCFRYFLLP
Trigger: TGGCAGCAAGAAGTAACGGAAACAGTTTATGAAGCAGTAAATGCAGACACAGATAAAATCGAGGCCAGGAAGAGAGCTAAAAATAAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR CCA 90 bp GATGACCAGTGTGGCCTTCAAACAGTCGTTTCTAATATCTGTATATaGCATATGTCAGACCAGAAATCAAGCTACATCTTGTTTGCAACA +
Preference number: 1 (lower is better)
Translates to: DDQCGLQTVVSNICI*HMSDQKSSYILFAT
Trigger: TGTTGCAAACAAGATGTAGCTTGATTTCTGGTCTGACATATGCCATATACAGATATTAGAAACGACTGTTTGAAGGCCACACTGGTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR TCA 90 bp AAATATGTTACTATATTGATGGCTATGAAAACAGACAGAGACAAATaGGTGAGGAGGCACGTTCTCTCACAGAGACAGGACTTCATTCTA +
Preference number: 1 (lower is better)
Translates to: KYVTILMAMKTDRDK*VRRHVLSQRQDFIL
Trigger: TAGAATGAAGTCCTGTCTCTGTGAGAGAACGTGCCTCCTCACTCATTTGTCTCTGTCTGTTTTCATAGCCATCAATATAGTAACATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR TCA 90 bp TCAGTGAATGGACCAATCAGAGGCATGAGCACTTTGCATGAATGGTaGCATAATAAGCTGACTTCTAGAAGTTTTGTTGAAAAATCATAC +
Preference number: 1 (lower is better)
Translates to: SVNGPIRGMSTLHEW*HNKLTSRSFVEKSY
Trigger: GTATGATTTTTCAACAAAACTTCTAGAAGTCAGCTTATTATGTCACCATTCATGCAAAGTGCTCATGCCTCTGATTGGTCCATTCACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR CCA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCAAAAAGGCTGAGACCCTaGTGTGTCCTCCTCGAGGAC +
Preference number: 2 (lower is better)
Translates to: KGPDSSREPGGVPVANRSKRLRP*CVLLED
Trigger: GTCCTCGAGGAGGACACACCAGGGTCTCAGCCTTTT...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR-3UTR TCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCGGCAGGGAGCTGAGCTaGCCCCAAGCCGAAGGGTCC +
Preference number: 2 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLGRELS*PQAEGS
Trigger: GGACCCTTCGGCTTGGGGTCAGCTCAGCTCCCTGCC...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR-3UTR TCA 90 bp AATATCAAAGGCATCAGCAGCATTGACTTCTCCCCGGGGAGGAATCAAGGGTGGTGTGAGCCGCCTCCGTaGCAGCCCAGCCGCTTGCTA +
Preference number: 2 (lower is better)
Translates to: NIKGISSIDFSPGRNQGWCEPPP*QPSRLL
Trigger: TAGCAAGCGGCTGGGCTGTCACGGAGGCGGCTCACA...CCACCCTTGATTCCTCCCCGGGGAGAAGTCAATGCTGCTGATGCCTTTGATATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR GCA 90 bp AGACCCTGGTGTGTCCTCCTCGAGGACCCTCCCTGTTTCTGGGTGCTAGAGGCCGTTTCCGTTACTTCTTaGTGCCAGCGTTCAGAGATG +
Preference number: 2 (lower is better)
Translates to: RPWCVLLEDPPCFWVLEAVSVTS*CQRSEM
Trigger: CATCTCTGAACGCTGGCAGCAAGAAGTAACGGAAAC...GGCCTCTAGCACCCAGAAACAGGGAGGGTCCTCGAGGAGGACACACCAGGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR CCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCGGCAGGGCAGTCATGTaGGTGCGGCTCCCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPGRAVM*VRLPEE
Trigger: CTCCTCTGGGAGCCGCACCCACATGACTGCCCTGCC...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR CCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCTCCGTCATTCCCACCTaGCTGAGGGGGCCCCGGAAC +
Preference number: 2 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPSVIPT*LRGPRN
Trigger: GTTCCGGGGCCCCCTCAGCCAGGTGGGAATGACGGA...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR CCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTCTCCTCTCGGGAGCCTaGAGGAGTCCCGGTAGCGAA +
Preference number: 2 (lower is better)
Translates to: THTHTHGVFWRWPGNALALLSGA*RSPGSE
Trigger: TTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAG...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR TCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAGGCAGGGAGCTGAGCTaGCCCCAAGCCGAAGGGTCC +
Preference number: 2 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQGRELS*PQAEGS
Trigger: GGACCCTTCGGCTTGGGGTCAGCTCAGCTCCCTGCC...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR-3UTR TCA 90 bp GTGACAGCCCAGCCGCTTGCTAACGTCTCGCTGAAGCAAGCCCTCCAAAAGGGATGGTTTTATGTTGTCTaGAAGGGCTGTGACGTGCAC +
Preference number: 2 (lower is better)
Translates to: VTAQPLANVSLKQALQKGWFYVV*KGCDVH
Trigger: GTGCACGTCACAGCCCTTTCAGACAACATAAAACCA...TCCCTTTTGGAGGGCTTGCTTCAGCGAGACGTTAGCAAGCGGCTGGGCTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR TCA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCAGTTCCACATTCACGGTaGGTGTCATTCGGTCAATTT +
Preference number: 2 (lower is better)
Translates to: KGPDSSREPGGVPVANRSVPHSR*VSFGQF
Trigger: AAATTGACCGAATGACACTCACCGTGAATGTGGAAC...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR TCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGAGGCATCAGCAGCATTaGCTTCTCCCCGGGGAGGAA +
Preference number: 2 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQRHQQH*LLPGEE
Trigger: TTCCTCCCCGGGGAGAAGTCAATGCTGCTGATGCCT...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR TCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTTTCACCCCAAAAGGCTaGGACCCTGGTGTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: THTHTHGVFWRWPGNALAFTPKG*DPGVSS
Trigger: GGAGGACACACCAGGGTCTCAGCCTTTTGGGGTGAA...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR TCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCTTCACCCCAAAAGGCTaGGACCCTGGTGTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPFTPKG*DPGVSS
Trigger: GGAGGACACACCAGGGTCTCAGCCTTTTGGGGTGAA...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR-3UTR CCA 90 bp TTAACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCCTCTCGGGAGCCTaGAGGAGTCCCGGTAGCGAA +
Preference number: 2 (lower is better)
Translates to: LTPGQEVSCEVHKRNTLWLLSGA*RSPGSE
Trigger: TTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAG...CCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR-3UTR TCA 90 bp ATAAACTGTTTCCGTTACTTCTTGCTGCCAGCGTTCAGAGATGACCAAAGGGAAGACAAGGCAGGGAGCTaGGCTGACCCCAAGCCGAAG +
Preference number: 2 (lower is better)
Translates to: INCFRYFLLPAFRDDQREDKAGS*ADPKPK
Trigger: CTTCGGCTTGGGGTCAGCTCAGCTCCCTGCCTTGTC...TTCCCTTTGGTCATCTCTGAACGCTGGCAGCAAGAAGTAACGGAAACAGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR TCA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCAGGCTGCAGTGAGCCATaGTCATCCCACTGTTCTCCA +
Preference number: 2 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNAGCSEP*SSHCSP
Trigger: TGGAGAACAGTGGGATGATCATGGCTCACTGCAGCC...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR TCA 90 bp GGACCCTCCCTGTTTCTGGGTGCTAGAGGCCGTTGCTGTTTCTGTGACAGAGGGGCCAGTCAACACCTTTaGAAAAGCTGTGCTCTTTTA +
Preference number: 2 (lower is better)
Translates to: GPSLFLGARGRCCFCDRGASQHL*KSCALL
Trigger: TAAAAGAGCACAGCTTTTTCAAAGGTGTTGACTGGC...CCCTCTGTCACAGAAACAGCAACGGCCTCTAGCACCCAGAAACAGGGAGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR TCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTTGCTAACGTCTCGCTaGAGCAAGCCCTCCAAAAGG +
Preference number: 2 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLLLTSR*SKPSKR
Trigger: CCTTTTGGAGGGCTTGCTTCAGCGAGACGTTAGCAA...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR GCA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCACCTATGAGCTTGAGATaGAGACGGGAACGGCATCAG +
Preference number: 2 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNAPMSLR*RRERHQ
Trigger: CTGATGCCGTTCCCGTCTGCATCTCAAGCTCATAGG...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR TCA 90 bp ATAAACTGTTTCCGTTACTTCTTGCTGCCAGCGTTCAGAGATGACCAAAGGGAACTCTTTTACTTCCTGTaGGCCGCCTCCGTGACAGCC +
Preference number: 2 (lower is better)
Translates to: INCFRYFLLPAFRDDQRELFYFL*AASVTA
Trigger: GGCTGTCACGGAGGCGGCTCACAGGAAGTAAAAGAG...TTCCCTTTGGTCATCTCTGAACGCTGGCAGCAAGAAGTAACGGAAACAGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR GCA 90 bp TTAACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGGGACTCACCCATGAGTaGTCCTGCATGCCAGGTACT +
Preference number: 2 (lower is better)
Translates to: LTPGQEVSCEVHKRNTLWGLTHE*SCMPGT
Trigger: AGTACCTGGCATGCAGGAGCACTCATGGGTGAGTCC...CCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR GCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGTTCAGCATGTACCCGTaGATAATACAGTCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQFSMYP*IIQSFP
Trigger: GGGGAAGGACTGTATTATGCACGGGTACATGCTGAA...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR CCA 90 bp ATTTTGCCGGGACTCTCCCTCTCCTCTCCATTCAAGTCTATTTGGAAAGAGGTAAAAAGGCTGAGACCCTaGTGTGTCCTCCTCGAGGAC +
Preference number: 2 (lower is better)
Translates to: ILPGLSLSSPFKSIWKEVKRLRP*CVLLED
Trigger: GTCCTCGAGGAGGACACACCAGGGTCTCAGCCTTTT...TACCTCTTTCCAAATAGACTTGAATGGAGAGGAGAGGGAGAGTCCCGGCAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR TCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGCCAATGATGGACGGATaGATGCCTTCAATGATTAGT +
Preference number: 2 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQPMMDG*MPSMIS
Trigger: ACTAATCATTGAAGGCATTCATCCGTCCATCATTGG...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR GCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGCAGAATATGTGGCAATaGTTAGGGCAATCTGTTACC +
Preference number: 2 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQQNMWQ*LGQSVT
Trigger: GGTAACAGATTGCCCTAAGCATTGCCACATATTCTG...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR-3UTR GCA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCAGAACAATGGCTTTTCTaGTTCTGGAGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNAEQWLF*FWSVCV
Trigger: CACACACACACTCCAGAAGCAGAAAAGCCATTGTTC...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR GCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACGCTCTGGGTCCCCTGTaGCTCCATGGGAGGGTGCCA +
Preference number: 2 (lower is better)
Translates to: FNKGNLKFGSLRFSISANALGPL*LHGRVP
Trigger: TGGCACCCTCCCATGGAGGCACAGGGGACCCAGAGC...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR CCA 90 bp TCATCAAATGAGCCAATATCAAAGGCATCAGCAGCATTGACTTCTCCCCGGGGAAGGAGAGAAGGTGTCTaGAAGTTCCACATTCACGGT +
Preference number: 2 (lower is better)
Translates to: SSNEPISKASAALTSPRGRREGV*KFHIHG
Trigger: ACCGTGAATGTGGAACTTCCAGACACCTTCTCTCCT...TCCCCGGGGAGAAGTCAATGCTGCTGATGCCTTTGATATTGGCTCATTTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR CCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCCCACTGAGTCAGAAATaGGTTTCCCAGTTTCAGCAT +
Preference number: 2 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLPLSQK*VSQFQH
Trigger: ATGCTGAAACTGGGAAACCCATTTCTGACTCAGTGG...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR TCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGAGTATCATTCATTCATaGCAGATGCATGACGACATG +
Preference number: 2 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQSIIHS*QMHDDM
Trigger: CATGTCGTCATGCATCTGTCATGAATGAATGATACT...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR GCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCCAGAATATGTGGCAATaGTTAGGGCAATCTGTTACC +
Preference number: 2 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPQNMWQ*LGQSVT
Trigger: GGTAACAGATTGCCCTAAGCATTGCCACATATTCTG...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR-3UTR GCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTGGACAAGAAGTCAGTTaGGAAGTGCACAAAAGAAAC +
Preference number: 2 (lower is better)
Translates to: THTHTHGVFWRWPGNALAGQEVS*EVHKRN
Trigger: GTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCC...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR GCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAATTCCTGTTTTCCCTGTaGAGAACCCGACTCCAGAGT +
Preference number: 2 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQFLFSL*RTRLQS
Trigger: ACTCTGGAGTCGGGTTCTGCACAGGGAAAACAGGAA...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR CCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCCATCCCCCAGCAGTATaGAGCAAAGACATAGAAAAT +
Preference number: 2 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLHPPAV*SKDIEN
Trigger: ATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATG...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR-3UTR CCA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCATCCATCACAACATTTTaGCAGAAGGCACTCAAACCA +
Preference number: 2 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNASITTF*QKALKP
Trigger: TGGTTTGAGTGCCTTCTGCCAAAATGTTGTGATGGA...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR TCA 90 bp ATTTTGCCGGGACTCTCCCTCTCCTCTCCATTCAAGTCTATTTGGAAAGAGGTAGCTGGGTTCAAGTTGTaGCTTGTTGGTTTAGTGACT +
Preference number: 2 (lower is better)
Translates to: ILPGLSLSSPFKSIWKEVAGFKL*LVGLVT
Trigger: AGTCACTAAACCAACAAGTCACAACTTGAACCCAGC...TACCTCTTTCCAAATAGACTTGAATGGAGAGGAGAGGGAGAGTCCCGGCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR GCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCTGTCGTACAGCCCAGTaGAAAGTATCATTCATTCAT +
Preference number: 2 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPCRTAQ*KVSFIH
Trigger: ATGAATGAATGATACTTTGCACTGGGCTGTACGACA...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR GCA 90 bp GGTCAGGGAGGGAGGAATGTTATTTGTGGCGTTGTTTTGAAACATCCTGTGCTGAAATTTGTCGACTTCTaGAAAGGCGGTCTTCCTCAT +
Preference number: 2 (lower is better)
Translates to: GQGGRNVICGVVLKHPVLKFVDF*KGGLPH
Trigger: ATGAGGAAGACCGCCTTTGCAGAAGTCGACAAATTT...CAGCACAGGATGTTTCAAAACAACGCCACAAATAACATTCCTCCCTCCCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455558.2
3UTR-3UTR GCA 90 bp TTTTCCAGTGTCTGCTTTCCTGCAACCATAAACTTCCCCGAATCCTCCTCGTCCACGTGTTCTACAGCTTaGTTTGAGAAAGGATGTGAA +
Preference number: 2 (lower is better)
Translates to: FSSVCFPATINFPESSSSTCSTA*FEKGCE
Trigger: TTCACATCCTTTCTCAAAGCAAGCTGTAGAACACGT...GGACGAGGAGGATTCGGGGAAGTTTATGGTTGCAGGAAAGCAGACACTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455558.2
3UTR-3UTR TCA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCAACTTTGCATGAATGGTaGCATAATAAGCTGACTTCT +
Preference number: 2 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNATLHEW*HNKLTS
Trigger: AGAAGTCAGCTTATTATGTCACCATTCATGCAAAGT...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR TCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACATGGTCTCAATCTCCTaGCCTCGTGAACCGCCCCTC +
Preference number: 2 (lower is better)
Translates to: FNKGNLKFGSLRFSISANMVSIS*PREPPL
Trigger: GAGGGGCGGTTCACGAGGTCAGGAGATTGAGACCAT...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR TCA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCATTCATCAAGCATCTCTaGATGACACAGAAACATTTC +
Preference number: 2 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNAFIKHL*MTQKHF
Trigger: GAAATGTTTCTGTGTCATTCAGAGATGCTTGATGAA...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR TCA 90 bp GGTCAGGGAGGGAGGAATGTTATTTGTGGCGTTGTTTTGAAACATCCTGTGCTGTGGCTGAAAAAGAGTTaGTGTCACTTGTTTCTTGGA +
Preference number: 2 (lower is better)
Translates to: GQGGRNVICGVVLKHPVLWLKKS*CHLFLG
Trigger: TCCAAGAAACAAGTGACATCAACTCTTTTTCAGCCA...CAGCACAGGATGTTTCAAAACAACGCCACAAATAACATTCCTCCCTCCCTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455558.2
3UTR-3UTR TCA 90 bp TTTTCCAGTGTCTGCTTTCCTGCAACCATAAACTTCCCCGAATCCTCCTCGTCCTCTTCTATGTATGGCTaGAAAAGAGTTGATGTCACT +
Preference number: 2 (lower is better)
Translates to: FSSVCFPATINFPESSSSSSMYG*KRVDVT
Trigger: AGTGACATCAACTCTTTTTCAGCCATACATAGAAGA...GGACGAGGAGGATTCGGGGAAGTTTATGGTTGCAGGAAAGCAGACACTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455558.2
3UTR-3UTR GCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCATATCAAGGACAGGATaGAGACAATTACGATGTCAA +
Preference number: 2 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLISRTG*RQLRCQ
Trigger: TTGACATCGTAATTGTCTGCATCCTGTCCTTGATAT...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR GCA 90 bp GGTCAGGGAGGGAGGAATGTTATTTGTGGCGTTGTTTTGAAACATCCTGTGCTGCATTTTTCCAGTGTCTaGTTTCCTGCAACCATAAAC +
Preference number: 2 (lower is better)
Translates to: GQGGRNVICGVVLKHPVLHFSSV*FPATIN
Trigger: GTTTATGGTTGCAGGAAAGCAGACACTGGAAAAATG...CAGCACAGGATGTTTCAAAACAACGCCACAAATAACATTCCTCCCTCCCTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455558.2
3UTR-3UTR GCA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTTCCGTTACTTCTTGCTaGCAGCGTTCAGAGATGACC +
Preference number: 2 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVSVTSC*QRSEMT
Trigger: GGTCATCTCTGAACGCTGGCAGCAAGAAGTAACGGA...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR CCA 90 bp TTAACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCAGAGTCAGAAAAGCTaGGTTCAAGTTGTGACTTGT +
Preference number: 2 (lower is better)
Translates to: LTPGQEVSCEVHKRNTLWQSQKS*VQVVTC
Trigger: ACAAGTCACAACTTGAACCCAGCTTTTCTGACTCTG...CCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR CAA 90 bp ATCTGTGTCTGCATTTACTGCTTCATAAACTGTTTCCGTTACTTCTaGCTGCCAGCGTTCAGAGATGACCAAAGGGAAGTTCTTGTAGAG +
Preference number: 2 (lower is better)
Translates to: ICVCIYCFINCFRYF*LPAFRDDQREVLVE
Trigger: CTCTACAAGAACTTCCCTTTGGTCATCTCTGAACGCTGGCAGCAAGAAGTAACGGAAACAGTTTATGAAGCAGTAAATGCAGACACAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR TCA 90 bp TTAACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGATAGAAAATCAGCAGTaGCTAGACAGAATATGTGGC +
Preference number: 2 (lower is better)
Translates to: LTPGQEVSCEVHKRNTLWIENQQ*LDRICG
Trigger: GCCACATATTCTGTCTAGTCACTGCTGATTTTCTAT...CCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR-3UTR GCA 90 bp TTAACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGAAGTCAGTTGCGAAGTaGACAAAAGAAACACACTGT +
Preference number: 2 (lower is better)
Translates to: LTPGQEVSCEVHKRNTLWKSVAK*TKETHC
Trigger: ACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTT...CCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR-3UTR GCA 90 bp ATAAACTGTTTCCGTTACTTCTTGCTGCCAGCGTTCAGAGATGACCAAAGGGAACCTTTGAAAAAGCTGTaGTCTTTTACTTCCTGTGAG +
Preference number: 2 (lower is better)
Translates to: INCFRYFLLPAFRDDQREPLKKL*SFTSCE
Trigger: CTCACAGGAAGTAAAAGAGCACAGCTTTTTCAAAGG...TTCCCTTTGGTCATCTCTGAACGCTGGCAGCAAGAAGTAACGGAAACAGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR CCA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTTTAAGACTGATGACATaGGGGATTTCGCTGGTTCTC +
Preference number: 2 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVLRLMT*GISLVL
Trigger: GAGAACCAGCGAAATCCCCCATGTCATCAGTCTTAA...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CAA 90 bp TCTGTATATGGCATATGTCAGACCAGAAATCAAGCTACATCTTGTTaGCAACAAACAGACCATTGTTTGTTGCTGCTGCTGTCTTCAGCA +
Preference number: 2 (lower is better)
Translates to: SVYGICQTRNQATSC*QQTDHCLLLLLSSA
Trigger: TGCTGAAGACAGCAGCAGCAACAAACAATGGTCTGTTTGTTGCAAACAAGATGTAGCTTGATTTCTGGTCTGACATATGCCATATACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR TCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACGCAGCAAATGGCTTCTaGATGAGTTCAGCAGCTCCA +
Preference number: 2 (lower is better)
Translates to: FNKGNLKFGSLRFSISANAANGF*MSSAAP
Trigger: TGGAGCTGCTGAACTCATTCAGAAGCCATTTGCTGC...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR TCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACAACAGTGTCCCCAACTaGCCAATGGGGCAATGCATT +
Preference number: 2 (lower is better)
Translates to: FNKGNLKFGSLRFSISANNSVPN*PMGQCI
Trigger: AATGCATTGCCCCATTGGTCAGTTGGGGACACTGTT...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR TCA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTATAGAAAATCAGCAGTaGCTAGACAGAATATGTGGC +
Preference number: 2 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVIENQQ*LDRICG
Trigger: GCCACATATTCTGTCTAGTCACTGCTGATTTTCTAT...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR-3UTR CCA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACTAGACAGAATATGTaGCAATGCTTAGGGCAATCT +
Preference number: 2 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVTRQNM*QCLGQS
Trigger: AGATTGCCCTAAGCATTGCCACATATTCTGTCTAGT...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR-3UTR CCA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTTTAATCCCATACACTTaGATAGTACGTGTCCGTCAT +
Preference number: 2 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVLIPYT*IVRVRH
Trigger: ATGACGGACACGTACTATCCAAGTGTATGGGATTAA...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR TCA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTGATGAATGCCTTCAATaGTTAGTTAATCCCATACAC +
Preference number: 2 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVDECLQ*LVNPIH
Trigger: GTGTATGGGATTAACTAATCATTGAAGGCATTCATC...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR CCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACCATCCCCCAGCAGTATaGAGCAAAGACATAGAAAAT +
Preference number: 2 (lower is better)
Translates to: FNKGNLKFGSLRFSISANHPPAV*SKDIEN
Trigger: ATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATG...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR TCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACAGATGCATGACGACATaGAAGTCAATATACACAGTT +
Preference number: 2 (lower is better)
Translates to: FNKGNLKFGSLRFSISANRCMTT*KSIYTV
Trigger: AACTGTGTATATTGACTTTCATGTCGTCATGCATCT...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR TCA 72 bp GTGGTGCTGACGGTGGTGTGCCCCACACAGGGCAGGTaGCCTCAGACGTGGAGCAGCATCTCCCGTGGGATA +
Preference number: 3 (lower is better)
Translates to: VVLTVVCPTQGR*PQTWSSISRGI
Trigger: TATCCCACGGGAGATGCTGCTCCACGTCTGAGGTCACCTGCCCTGTGTGGGGCACACCACCGTCAGCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR CAA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCAGACAGAGGGATGGCTTaGGGAGCTCCACAGTACCTG +
Preference number: 3 (lower is better)
Translates to: KGPDSSREPGGVPVANRSDRGMA*GAPQYL
Trigger: CAGGTACTGTGGAGCTCCCAAAGCCATCCCTCTGTC...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR CCA 72 bp TGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTaGTGTGTCCTCCTCGAGGACCCTCCCTGTTTCTGG +
Preference number: 3 (lower is better)
Translates to: CLILVHPKRLRP*CVLLEDPPCFW
Trigger: CCAGAAACAGGGAGGGTCCTCGAGGAGGACACACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR CCA 72 bp AGCCAGGTCAGAAAGACAGCCCCTTTGGGCCAGCTGTaGGGGCCTGCAGGAGTGGTTATCTCTGTGATTCGG +
Preference number: 3 (lower is better)
Translates to: SQVRKTAPLGQL*GPAGVVISVIR
Trigger: CCGAATCACAGAGATAACCACTCCTGCAGGCCCCCACAGCTGGCCCAAAGGGGCTGTCTTTCTGACCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CCA 72 bp CCCTGGTGTGTCCTCCTCGAGGACCCTCCCTGTTTCTaGGTGCTAGAGGCCGTTGCTGTTTCTGTGACAGAG +
Preference number: 3 (lower is better)
Translates to: PWCVLLEDPPCF*VLEAVAVSVTE
Trigger: CTCTGTCACAGAAACAGCAACGGCCTCTAGCACCCAGAAACAGGGAGGGTCCTCGAGGAGGACACACCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR TCA 72 bp GTGACAGAGGGATGGCTTTGGGAGCTCCACAGTACCTaGCCGAGGTTTGTTGAGGAACTTCGGGGCACGACG +
Preference number: 3 (lower is better)
Translates to: VTEGWLWELHST*PRFVEELRGTT
Trigger: CGTCGTGCCCCGAAGTTCCTCAACAAACCTCGGTCAGGTACTGTGGAGCTCCCAAAGCCATCCCTCTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR TCA 72 bp AGGCATGAGGCCCAGCGCATCCTCAACTGCACATGCTaGGAACCTATGAGCTTGAGATGCAGACGGGAACGG +
Preference number: 3 (lower is better)
Translates to: RHEAQRILNCTC*EPMSLRCRRER
Trigger: CCGTTCCCGTCTGCATCTCAAGCTCATAGGTTCTCAGCATGTGCAGTTGAGGATGCGCTGGGCCTCATGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR TCA 72 bp GGTTTCACTCTGCTAACCAGGATGGTCTCAATCTCCTaGCCTCGTGAACCGCCCCTCTCGGCCTCCCAAAGT +
Preference number: 3 (lower is better)
Translates to: GFTLLTRMVSIS*PREPPLSASQS
Trigger: ACTTTGGGAGGCCGAGAGGGGCGGTTCACGAGGTCAGGAGATTGAGACCATCCTGGTTAGCAGAGTGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR GCA 72 bp CAACTGACTTTTCCTCTGGCCATGCAGGCAACCGGGTaGAGACACAGCGGTATCCTGTGTCTGGTCGCAGAA +
Preference number: 3 (lower is better)
Translates to: QLTFPLAMQATG*RHSGILCLVAE
Trigger: TTCTGCGACCAGACACAGGATACCGCTGTGTCTGCACCCGGTTGCCTGCATGGCCAGAGGAAAAGTCAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR GCA 72 bp ACAGTGATCCAGACACTGCCTCTCCACCTCGGGGGCTaGAAAGTGCACACACACACACACACACACACACAC +
Preference number: 3 (lower is better)
Translates to: TVIQTLPLHLGG*KVHTHTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGCACTTTGCAGCCCCCGAGGTGGAGAGGCAGTGTCTGGATCACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR TCA 72 bp GAAAGCAGTATTTCACAGCAGGTGTGCTGCCCGACGTaGCGAAAGACATGCATGCGCCTCTCAGCACAGACC +
Preference number: 3 (lower is better)
Translates to: ESSISQQVCCPT*RKTCMRLSAQT
Trigger: GGTCTGTGCTGAGAGGCGCATGCATGTCTTTCGTCACGTCGGGCAGCACACCTGCTGTGAAATACTGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR GCA 72 bp AGCAGGTGTGCTGCCCGACGTGACGAAAGACATGCATaGGCCTCTCAGCACAGACCAGAAGATCAACTGTTG +
Preference number: 3 (lower is better)
Translates to: SRCAARRDERHA*ASQHRPEDQLL
Trigger: CAACAGTTGATCTTCTGGTCTGTGCTGAGAGGCGCATGCATGTCTTTCGTCACGTCGGGCAGCACACCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CCA 72 bp AGGCAACCGGGTGCAGACACAGCGGTATCCTGTGTCTaGTCGCAGAAACACCTCCATCACAACATTTTGGCA +
Preference number: 3 (lower is better)
Translates to: RQPGADTAVSCV*SQKHLHHNILA
Trigger: TGCCAAAATGTTGTGATGGAGGTGTTTCTGCGACCAGACACAGGATACCGCTGTGTCTGCACCCGGTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CCA 72 bp CACACACACACACACACACACACACACGGGGTGTTTTaGAGATGGCCTGGTAATGCTTTAGCTCTGGGTCCC +
Preference number: 3 (lower is better)
Translates to: HTHTHTHTHGVF*RWPGNALALGP
Trigger: GGGACCCAGAGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR CAA 90 bp GGACCCTCCCTGTTTCTGGGTGCTAGAGGCCGTTGCTGTTTCTGTGACAGAGGGGTCTTTGGTTTTATGTaGTCTGAAAGGGCTGTGACG +
Preference number: 3 (lower is better)
Translates to: GPSLFLGARGRCCFCDRGVFGFM*SERAVT
Trigger: CGTCACAGCCCTTTCAGACAACATAAAACCAAAGAC...CCCTCTGTCACAGAAACAGCAACGGCCTCTAGCACCCAGAAACAGGGAGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR CCA 72 bp CCTAGGTACGAGATATTAGACGCTAAGCCCAGACCCTaGTGGAGTCAACAGCAGGCCCTTTATCCTGGAGAT +
Preference number: 3 (lower is better)
Translates to: PRYEILDAKPRP*WSQQQALYPGD
Trigger: ATCTCCAGGATAAAGGGCCTGCTGTTGACTCCACCAGGGTCTGGGCTTAGCGTCTAATATCTCGTACCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR-3UTR CAA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCGTACCTGACCGAGGTTaGTTGAGGAACTTCGGGGCA +
Preference number: 3 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLVPDRG*LRNFGA
Trigger: TGCCCCGAAGTTCCTCAACAAACCTCGGTCAGGTAC...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR TCA 72 bp GCAGAAGGCACTCAAACCAGACCCCAACACAACTGGTaGCCGCCCTCAGAAACAGCTCAATCTAGTCTTACA +
Preference number: 3 (lower is better)
Translates to: AEGTQTRPQHNW*PPSETAQSSLT
Trigger: TGTAAGACTAGATTGAGCTGTTTCTGAGGGCGGTCACCAGTTGTGTTGGGGTCTGGTTTGAGTGCCTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR TCA 72 bp GCGCCTCTCAGCACAGACCAGAAGATCAACTGTTGTTaGAAACAGTCCATGGTGGTGAGAAGAGATGTCGGC +
Preference number: 3 (lower is better)
Translates to: APLSTDQKINCC*KQSMVVRRDVG
Trigger: GCCGACATCTCTTCTCACCACCATGGACTGTTTTCAACAACAGTTGATCTTCTGGTCTGTGCTGAGAGGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR TCA 72 bp CATCAAATGAGCCAATATCAAAGGCATCAGCAGCATTaGCTTCTCCCCGGGGAGGAATCAAGGGTGGTGGGT +
Preference number: 3 (lower is better)
Translates to: HQMSQYQRHQQH*LLPGEESRVVG
Trigger: ACCCACCACCCTTGATTCCTCCCCGGGGAGAAGTCAATGCTGCTGATGCCTTTGATATTGGCTCATTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR CCA 72 bp GAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTaGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGAC +
Preference number: 3 (lower is better)
Translates to: EVSCEVHKRNTL*LSHPPAVWSKD
Trigger: GTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR CCA 72 bp AGGTACGAGATATTAGACGCTAAGCCCAGACCCTGGTaGAGTCAACAGCAGGCCCTTTATCCTGGAGATCTA +
Preference number: 3 (lower is better)
Translates to: RYEILDAKPRPW*SQQQALYPGDL
Trigger: TAGATCTCCAGGATAAAGGGCCTGCTGTTGACTCCACCAGGGTCTGGGCTTAGCGTCTAATATCTCGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR TCA 72 bp CCAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTaGCCAATGGGGCAATGCATTCACAGTGATCCAGAC +
Preference number: 3 (lower is better)
Translates to: PGLQWICNSVPN*PMGQCIHSDPD
Trigger: GTCTGGATCACTGTGAATGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CCA 72 bp GTGTCTGGTCGCAGAAACACCTCCATCACAACATTTTaGCAGAAGGCACTCAAACCAGACCCCAACACAACT +
Preference number: 3 (lower is better)
Translates to: VSGRRNTSITTF*QKALKPDPNTT
Trigger: AGTTGTGTTGGGGTCTGGTTTGAGTGCCTTCTGCCAAAATGTTGTGATGGAGGTGTTTCTGCGACCAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CCA 72 bp CTCCAAAAGGGACTTCAGTTCAGGAGAGAAGGTGTCTaGAAGTTCCACATTCACGGTGAGTGTCATTCGGTC +
Preference number: 3 (lower is better)
Translates to: LQKGLQFRREGV*KFHIHGECHSV
Trigger: GACCGAATGACACTCACCGTGAATGTGGAACTTCCAGACACCTTCTCTCCTGAACTGAAGTCCCTTTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR CCA 72 bp TTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATaGGGCAATGCATTCACAGTGATCCAGACACTGCCT +
Preference number: 3 (lower is better)
Translates to: FSGFVTVSPTDQ*GNAFTVIQTLP
Trigger: AGGCAGTGTCTGGATCACTGTGAATGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CCA 72 bp TCCCTGTGCAGAACCCGACTCCAGAGTCAGAAAAGCTaGGTTCAAGTTGTGACTTGTTGGTTTAGTGACTGT +
Preference number: 3 (lower is better)
Translates to: SLCRTRLQSQKS*VQVVTCWFSDC
Trigger: ACAGTCACTAAACCAACAAGTCACAACTTGAACCCAGCTTTTCTGACTCTGGAGTCGGGTTCTGCACAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR CAA 90 bp TTTTCCAGTGTCTGCTTTCCTGCAACCATAAACTTCCCCGAATCCTCCTCGTCCGTTCTACAGCTTGCTTaGAGAAAGGATGTGAACAGG +
Preference number: 3 (lower is better)
Translates to: FSSVCFPATINFPESSSSVLQLA*RKDVNR
Trigger: CCTGTTCACATCCTTTCTCAAAGCAAGCTGTAGAAC...GGACGAGGAGGATTCGGGGAAGTTTATGGTTGCAGGAAAGCAGACACTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455558.2
3UTR-3UTR CAA 90 bp GCACAAACTCTGGATCACTCTCACATTGCAAGACAAATTGTTTCCCTCCTTTTAAAGGCATCAGCAGCATaGACTTCTCCCCGGGGAGGA +
Preference number: 3 (lower is better)
Translates to: AQTLDHSHIARQIVSLLLKASAA*TSPRGG
Trigger: TCCTCCCCGGGGAGAAGTCAATGCTGCTGATGCCTT...TAAAAGGAGGGAAACAATTTGTCTTGCAATGTGAGAGTGATCCAGAGTTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR CAA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCAGGACAAGAAGTCAGTaGCGAAGTGCACAAAAGAAA +
Preference number: 3 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLRTRSQ*RSAQKK
Trigger: TTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCT...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR-3UTR CAA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCAGGACAAGAAGTCAGTaGCGAAGTGCACAAAAGAAA +
Preference number: 3 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPRTRSQ*RSAQKK
Trigger: TTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCT...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR TCA 72 bp CCCGACTCCAGAGTCAGAAAAGCTGGGTTCAAGTTGTaGCTTGTTGGTTTAGTGACTGTCAGCCACATAGAA +
Preference number: 3 (lower is better)
Translates to: PDSRVRKAGFKL*LVGLVTVSHIE
Trigger: TTCTATGTGGCTGACAGTCACTAAACCAACAAGTCACAACTTGAACCCAGCTTTTCTGACTCTGGAGTCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR TCA 72 bp AGTGAGCAGGGTAGAACAGAAGAGGCCTGTTACTCTTaGCAGTTTTACCAGGACTTCAGTGGATTTGTAACA +
Preference number: 3 (lower is better)
Translates to: SEQGRTEEACYS*QFYQDFSGFVT
Trigger: TGTTACAAATCCACTGAAGTCCTGGTAAAACTGTCAAGAGTAACAGGCCTCTTCTGTTCTACCCTGCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR GCA 72 bp TGGAGCAGCATCTCCCGTGGGATACTATTTCAGACGTaGACTAGTGAGTGTATACTGAGAAGGGATTATAAA +
Preference number: 3 (lower is better)
Translates to: WSSISRGILFQT*TSECILRRDYK
Trigger: TTTATAATCCCTTCTCAGTATACACTCACTAGTGCACGTCTGAAATAGTATCCCACGGGAGATGCTGCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR TCA 72 bp AGAAGATCAACTGTTGTTGAAAACAGTCCATGGTGGTaGGAAGAGATGTCGGCCACATTACTAGGTGCATTA +
Preference number: 3 (lower is better)
Translates to: RRSTVVENSPWW*EEMSATLLGAL
Trigger: TAATGCACCTAGTAATGTGGCCGACATCTCTTCTCACCACCATGGACTGTTTTCAACAACAGTTGATCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR TCA 72 bp GGATACTATTTCAGACGTGCACTAGTGAGTGTATACTaGGAAGGGATTATAAACCTTCCCTGGCACAACAGA +
Preference number: 3 (lower is better)
Translates to: GYYFRRALVSVY*EGIINLPWHNR
Trigger: TCTGTTGTGCCAGGGAAGGTTTATAATCCCTTCTCAGTATACACTCACTAGTGCACGTCTGAAATAGTATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR GCA 72 bp GTGCTACTCTTAAAAGCAGTGTTTCTAAGCACAGCTTaGCTTTTTCAAAGAGTGAAGGTGGCCTTTCTGTTT +
Preference number: 3 (lower is better)
Translates to: VLLLKAVFLSTA*LFQRVKVAFLF
Trigger: AAACAGAAAGGCCACCTTCACTCTTTGAAAAAGGCAAGCTGTGCTTAGAAACACTGCTTTTAAGAGTAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CCA 72 bp AAAGAACTTCTTCAGAAAGTCCTGATAGGCAGCAAATaGCTTCTGAATGAGTTCAGCAGCTCCACATTCAAA +
Preference number: 3 (lower is better)
Translates to: KELLQKVLIGSK*LLNEFSSSTFK
Trigger: TTTGAATGTGGAGCTGCTGAACTCATTCAGAAGCCATTTGCTGCCTATCAGGACTTTCTGAAGAAGTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR GCA 72 bp TTTAGCTCTCTTCCTGGCCTCGATTTTATCTGTGTCTaGATTTACTGCTTCATAAACTGTTTCCGTTACTTC +
Preference number: 3 (lower is better)
Translates to: FSSLPGLDFICV*IYCFINCFRYF
Trigger: GAAGTAACGGAAACAGTTTATGAAGCAGTAAATGCAGACACAGATAAAATCGAGGCCAGGAAGAGAGCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR-3UTR CAA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACGTTAATCCCATACACTaGGATAGTACGTGTCCGTCA +
Preference number: 3 (lower is better)
Translates to: FNKGNLKFGSLRFSISANVNPIH*DSTCPS
Trigger: TGACGGACACGTACTATCCAAGTGTATGGGATTAAC...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp GTGACAGCCCAGCCGCTTGCTAACGTCTCGCTGAAGCAAGCCCTCCAAAAGGGAGGCAGGGAGCTGAGCTaGCCCCAAGCCGAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VTAQPLANVSLKQALQKGGRELS*PQAEGS
Trigger: GGACCCTTCGGCTTGGGGTCAGCTCAGCTCCCTGCC...TCCCTTTTGGAGGGCTTGCTTCAGCGAGACGTTAGCAAGCGGCTGGGCTGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR TCA 90 bp AGACCCTGGTGTGTCCTCCTCGAGGACCCTCCCTGTTTCTGGGTGCTAGAGGCCCTCTTTTACTTCCTGTaGGCCGCCTCCGTGACAGCC +
Preference number: 4 (lower is better)
Translates to: RPWCVLLEDPPCFWVLEALFYFL*AASVTA
Trigger: GGCTGTCACGGAGGCGGCTCACAGGAAGTAAAAGAG...GGCCTCTAGCACCCAGAAACAGGGAGGGTCCTCGAGGAGGACACACCAGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR TCA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCACTGACCGAGGTTTGTTaGGGAACTTCGGGGCACGAC +
Preference number: 4 (lower is better)
Translates to: KGPDSSREPGGVPVANRSLTEVC*GTSGHD
Trigger: GTCGTGCCCCGAAGTTCCTCAACAAACCTCGGTCAG...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCATTCACCCCAAAAGGCTaGGACCCTGGTGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KGPDSSREPGGVPVANRSFTPKG*DPGVSS
Trigger: GGAGGACACACCAGGGTCTCAGCCTTTTGGGGTGAA...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCAATGGTCTCAATCTCCTaGCCTCGTGAACCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: KGPDSSREPGGVPVANRSMVSIS*PREPPL
Trigger: GAGGGGCGGTTCACGAGGTCAGGAGATTGAGACCAT...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCAGACCCTCCCTGTTTCTaGGTGCTAGAGGCCGTTGCT +
Preference number: 4 (lower is better)
Translates to: KGPDSSREPGGVPVANRSDPPCF*VLEAVA
Trigger: AGCAACGGCCTCTAGCACCCAGAAACAGGGAGGGTC...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
3UTR CAA 72 bp GGCTTTGGGAGCTCCACAGTACCTGACCGAGGTTTGTaGAGGAACTTCGGGGCACGACGCAATAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GFGSSTVPDRGL*RNFGARRNSRW
Trigger: CCAGCGGCTATTGCGTCGTGCCCCGAAGTTCCTCAACAAACCTCGGTCAGGTACTGTGGAGCTCCCAAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR GCA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCAGGTGCTAGAGGCCGTTaGTGTTTCTGTGACAGAGGG +
Preference number: 4 (lower is better)
Translates to: KGPDSSREPGGVPVANRSGARGR*CFCDRG
Trigger: CCCTCTGTCACAGAAACAGCAACGGCCTCTAGCACC...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CCA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGGGCAGGGCAGTCATGTaGGTGCGGCTCCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVGRAVM*VRLPEE
Trigger: CTCCTCTGGGAGCCGCACCCACATGACTGCCCTGCC...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCATTGCTAACGTCTCGCTaGAGCAAGCCCTCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: KGPDSSREPGGVPVANRSLLTSR*SKPSKR
Trigger: CCTTTTGGAGGGCTTGCTTCAGCGAGACGTTAGCAA...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCAGAGCTCCACAGTACCTaGCCGAGGTTTGTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: KGPDSSREPGGVPVANRSELHST*PRFVEE
Trigger: TTCCTCAACAAACCTCGGTCAGGTACTGTGGAGCTC...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGGCTCTGGGTCCCCTGTaGCTCCATGGGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQALGPL*LHGRVP
Trigger: TGGCACCCTCCCATGGAGGCACAGGGGACCCAGAGC...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCATCTGTGACAGAGGGATaGCTTTGGGAGCTCCACAGT +
Preference number: 4 (lower is better)
Translates to: KGPDSSREPGGVPVANRSSVTEG*LWELHS
Trigger: ACTGTGGAGCTCCCAAAGCCATCCCTCTGTCACAGA...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CCA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGCTCCTCTCGGGAGCCTaGAGGAGTCCCGGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVLLSGA*RSPGSE
Trigger: TTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAG...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CCA 90 bp TTAACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCATGTTGGCGAGCTTTaGCGGCGGCGCCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: LTPGQEVSCEVHKRNTLWHVGEL*RRRRRP
Trigger: CGGGCGGCGGCGCCGCCGCCAAAGCTCGCCAACATG...CCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
3UTR CAA 72 bp GATGGCTTTGGGAGCTCCACAGTACCTGACCGAGGTTaGTTGAGGAACTTCGGGGCACGACGCAATAGCCGC +
Preference number: 4 (lower is better)
Translates to: DGFGSSTVPDRG*LRNFGARRNSR
Trigger: GCGGCTATTGCGTCGTGCCCCGAAGTTCCTCAACAAACCTCGGTCAGGTACTGTGGAGCTCCCAAAGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR TCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTGTGAGCCGCCTCCGTaGCAGCCCAGCCGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLCEPPP*QPSRLL
Trigger: TAGCAAGCGGCTGGGCTGTCACGGAGGCGGCTCACA...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTCCCACACAGGGCAGGTaGCCTCAGACGTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: THTHTHGVFWRWPGNALAPTQGR*PQTWSS
Trigger: GCTGCTCCACGTCTGAGGTCACCTGCCCTGTGTGGG...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp GGACCCTCCCTGTTTCTGGGTGCTAGAGGCCGTTGCTGTTTCTGTGACAGAGGGTCTGTGACAGAGGGATaGCTTTGGGAGCTCCACAGT +
Preference number: 4 (lower is better)
Translates to: GPSLFLGARGRCCFCDRGSVTEG*LWELHS
Trigger: ACTGTGGAGCTCCCAAAGCCATCCCTCTGTCACAGA...CCCTCTGTCACAGAAACAGCAACGGCCTCTAGCACCCAGAAACAGGGAGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR CCA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGGCTAAGCCCAGACCCTaGTGGAGTCAACAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVAKPRP*WSQQQA
Trigger: GGCCTGCTGTTGACTCCACCAGGGTCTGGGCTTAGC...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGCCTTTGGGCCAGCTGTaGGGGCCTGCAGGAGTGGTT +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQPLGQL*GPAGVV
Trigger: AACCACTCCTGCAGGCCCCCACAGCTGGCCCAAAGG...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCGACAAGGCAGGGAGCTaGGCTGACCCCAAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPDKAGS*ADPKPK
Trigger: CTTCGGCTTGGGGTCAGCTCAGCTCCCTGCCTTGTC...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGCCCCAACACAACTGGTaGCCGCCCTCAGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVPQHNW*PPSETA
Trigger: AGCTGTTTCTGAGGGCGGTCACCAGTTGTGTTGGGG...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCAATCTCCTGACCTCGTaGACCGCCCCTCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPNLLTS*TAPLGL
Trigger: GAGGCCGAGAGGGGCGGTTCACGAGGTCAGGAGATT...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCAGTTTCCGTTACTTCTTaGTGCCAGCGTTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: KGPDSSREPGGVPVANRSVSVTS*CQRSEM
Trigger: CATCTCTGAACGCTGGCAGCAAGAAGTAACGGAAAC...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGATGCAGGCAACCGGGTaGAGACACAGCGGTATCCTG +
Preference number: 4 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVMQATG*RHSGIL
Trigger: CAGGATACCGCTGTGTCTGCACCCGGTTGCCTGCAT...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp GTGACAGCCCAGCCGCTTGCTAACGTCTCGCTGAAGCAAGCCCTCCAAAAGGGATTCCTGTTTTCCCTGTaGAGAACCCGACTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: VTAQPLANVSLKQALQKGFLFSL*RTRLQS
Trigger: ACTCTGGAGTCGGGTTCTGCACAGGGAAAACAGGAA...TCCCTTTTGGAGGGCTTGCTTCAGCGAGACGTTAGCAAGCGGCTGGGCTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR CCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGTCACACTCCGGATACTaGGCTCCGGCAGGACGATCC +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQSHSGY*APAGRS
Trigger: GGATCGTCCTGCCGGAGCCCAGTATCCGGAGTGTGA...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CCA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCATGGCTTTTCTGCTTCTaGAGTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: KGPDSSREPGGVPVANRSWLFCF*SVCVCV
Trigger: CACACACACACACACACTCCAGAAGCAGAAAAGCCA...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp GGACCCTCCCTGTTTCTGGGTGCTAGAGGCCGTTGCTGTTTCTGTGACAGAGGGTGGTTTTATGTTGTCTaGAAGGGCTGTGACGTGCAC +
Preference number: 4 (lower is better)
Translates to: GPSLFLGARGRCCFCDRGWFYVV*KGCDVH
Trigger: GTGCACGTCACAGCCCTTTCAGACAACATAAAACCA...CCCTCTGTCACAGAAACAGCAACGGCCTCTAGCACCCAGAAACAGGGAGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR GCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAGTCAGCGCCCCTCAGTaGACAGTCCCAGCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQVSAPQ*TVPAAS
Trigger: CGAGGCCGCTGGGACTGTGCACTGAGGGGCGCTGAC...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGGGTGCTAGAGGCCGTTaGTGTTTCTGTGACAGAGGG +
Preference number: 4 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVGARGR*CFCDRG
Trigger: CCCTCTGTCACAGAAACAGCAACGGCCTCTAGCACC...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCACACTCCGGATACTaGGCTCCGGCAGGACGATCC +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLSHSGY*APAGRS
Trigger: GGATCGTCCTGCCGGAGCCCAGTATCCGGAGTGTGA...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CCA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGAAAAGGCTGAGACCCTaGTGTGTCCTCCTCGAGGAC +
Preference number: 4 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVKRLRP*CVLLED
Trigger: GTCCTCGAGGAGGACACACCAGGGTCTCAGCCTTTT...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CCA 90 bp AGACCCTGGTGTGTCCTCCTCGAGGACCCTCCCTGTTTCTGGGTGCTAGAGGCCCATCCCCCAGCAGTATaGAGCAAAGACATAGAAAAT +
Preference number: 4 (lower is better)
Translates to: RPWCVLLEDPPCFWVLEAHPPAV*SKDIEN
Trigger: ATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATG...GGCCTCTAGCACCCAGAAACAGGGAGGGTCCTCGAGGAGGACACACCAGGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR TCA 90 bp ATAAACTGTTTCCGTTACTTCTTGCTGCCAGCGTTCAGAGATGACCAAAGGGAATGTGAGCCGCCTCCGTaGCAGCCCAGCCGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: INCFRYFLLPAFRDDQRECEPPP*QPSRLL
Trigger: TAGCAAGCGGCTGGGCTGTCACGGAGGCGGCTCACA...TTCCCTTTGGTCATCTCTGAACGCTGGCAGCAAGAAGTAACGGAAACAGTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR TCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCAGGCATCAGCAGCATTaGCTTCTCCCCGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLRHQQH*LLPGEE
Trigger: TTCCTCCCCGGGGAGAAGTCAATGCTGCTGATGCCT...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCCCACTATTCTCTTTGTaGCACCCAGCCCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLPLFSL*HPAQPP
Trigger: TGGGGGCTGGGCTGGGTGTCACAAAGAGAATAGTGG...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCAAAATTTGTCGACTTCTaGAAAGGCGGTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: KGPDSSREPGGVPVANRSKFVDF*KGGLPH
Trigger: ATGAGGAAGACCGCCTTTGCAGAAGTCGACAAATTT...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTCTTTTCCTCTGGCCATaGAGGCAACCGGGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: THTHTHGVFWRWPGNALALFLWP*RQPGAD
Trigger: GTCTGCACCCGGTTGCCTGCATGGCCAGAGGAAAAG...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCCTCCACCTCGGGGGCTaGAAAGTGCACACACACACA +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLLHLGG*KVHTHT
Trigger: TGTGTGTGTGTGCACTTTGCAGCCCCCGAGGTGGAG...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp GGACCCTCCCTGTTTCTGGGTGCTAGAGGCCGTTGCTGTTTCTGTGACAGAGGGCCACTGAGTCAGAAATaGGTTTCCCAGTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GPSLFLGARGRCCFCDRGPLSQK*VSQFQH
Trigger: ATGCTGAAACTGGGAAACCCATTTCTGACTCAGTGG...CCCTCTGTCACAGAAACAGCAACGGCCTCTAGCACCCAGAAACAGGGAGGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR CCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCCGACGCAATAGCCGCTaGGCCTCCTTGAAGGTTTCG +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPRRNSR*ASLKVS
Trigger: CGAAACCTTCAAGGAGGCCCAGCGGCTATTGCGTCG...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGTTGCTAACGTCTCGCTaGAGCAAGCCCTCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQLLTSR*SKPSKR
Trigger: CCTTTTGGAGGGCTTGCTTCAGCGAGACGTTAGCAA...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCAATAGAAAATCAGCAGTaGCTAGACAGAATATGTGGC +
Preference number: 4 (lower is better)
Translates to: KGPDSSREPGGVPVANRSIENQQ*LDRICG
Trigger: GCCACATATTCTGTCTAGTCACTGCTGATTTTCTAT...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGTCCGTTACTTCTTGCTaGCAGCGTTCAGAGATGACC +
Preference number: 4 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVSVTSC*QRSEMT
Trigger: GGTCATCTCTGAACGCTGGCAGCAAGAAGTAACGGA...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTGGACTCACCCATGAGTaGTCCTGCATGCCAGGTACT +
Preference number: 4 (lower is better)
Translates to: THTHTHGVFWRWPGNALAGLTHE*SCMPGT
Trigger: AGTACCTGGCATGCAGGAGCACTCATGGGTGAGTCC...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAGGAGGGATAGCTACCTaGCCCACACACAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQGGIAT*PTHRGS
Trigger: GGAGCCCCTGTGTGTGGGGCAGGTAGCTATCCCTCC...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCAAAAGGCTGAGACCCTaGTGTGTCCTCCTCGAGGAC +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPKRLRP*CVLLED
Trigger: GTCCTCGAGGAGGACACACCAGGGTCTCAGCCTTTT...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CCA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCAACTAGACAGAATATGTaGCAATGCTTAGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: KGPDSSREPGGVPVANRSTRQNM*QCLGQS
Trigger: AGATTGCCCTAAGCATTGCCACATATTCTGTCTAGT...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGGCGGTATCCTGTGTCTaGTCGCAGAAACACCTCCAT +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQAVSCV*SQKHLH
Trigger: ATGGAGGTGTTTCTGCGACCAGACACAGGATACCGC...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCAACTTTGCATGAATGGTaGCATAATAAGCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: KGPDSSREPGGVPVANRSTLHEW*HNKLTS
Trigger: AGAAGTCAGCTTATTATGTCACCATTCATGCAAAGT...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTGCAATGCATTCACAGTaGTCCAGACACTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: THTHTHGVFWRWPGNALAAMHSQ*SRHCLS
Trigger: GGAGAGGCAGTGTCTGGATCACTGTGAATGCATTGC...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGAACAGTGTCCCCAACTaGCCAATGGGGCAATGCATT +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQNSVPN*PMGQCI
Trigger: AATGCATTGCCCCATTGGTCAGTTGGGGACACTGTT...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCAACAGTCCATGGTGGTaGGAAGAGATGTCGGCCACA +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLNSPWW*EEMSAT
Trigger: TGTGGCCGACATCTCTTCTCACCACCATGGACTGTT...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp AATATCAAAGGCATCAGCAGCATTGACTTCTCCCCGGGGAGGAATCAAGGGTGGATCCTCTCAGAAGTTTaGAAAGCATGCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: NIKGISSIDFSPGRNQGWILSEV*KACSPG
Trigger: CCCTGGGCTGCATGCTTTTCAAACTTCTGAGAGGAT...CCACCCTTGATTCCTCCCCGGGGAGAAGTCAATGCTGCTGATGCCTTTGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR GCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTCCTATGAGCTTGAGATaGAGACGGGAACGGCATCAG +
Preference number: 4 (lower is better)
Translates to: THTHTHGVFWRWPGNALAPMSLR*RRERHQ
Trigger: CTGATGCCGTTCCCGTCTGCATCTCAAGCTCATAGG...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCCCAGGAAAGGTGGCATaGACCTGTAGTCCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLPGKVA*TCSPSY
Trigger: GTAGCTAGGACTACAGGTGCATGCCACCTTTCCTGG...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp TTAACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGAAGCCCAGACCCTGGTaGAGTCAACAGCAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: LTPGQEVSCEVHKRNTLWKPRPW*SQQQAL
Trigger: AAGGGCCTGCTGTTGACTCCACCAGGGTCTGGGCTT...CCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGACACACGGGGTGTTTTaGAGATGGCCTGGTAATGCT +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQTHGVF*RWPGNA
Trigger: AGCATTACCAGGCCATCTCCAAAACACCCCGTGTGT...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CAA 72 bp TCATCAAATGAGCCAATATCAAAGGCATCAGCAGCATaGACTTCTCCCCGGGGAGGAATCAAGGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSNEPISKASAA*TSPRGGIKGGG
Trigger: CCCACCACCCTTGATTCCTCCCCGGGGAGAAGTCAATGCTGCTGATGCCTTTGATATTGGCTCATTTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR TCA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGAGGTCATACATACAATaGAAGGACAGTCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVRSYIQ*KDSLLC
Trigger: GCACAGGAGACTGTCCTTTCATTGTATGTATGACCT...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGTCATCAGATCCAGGATaGAGCAGAGTTTATCTGGGG +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQSSDPG*SRVYLG
Trigger: CCCCAGATAAACTCTGCTTCATCCTGGATCTGATGA...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGGGCAAGACCAAGATCTaGTATTCTTGCGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQGKTKI*YSCVSM
Trigger: CATGGACACGCAAGAATATCAGATCTTGGTCTTGCC...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAATTCACCCCAAAAGGCTaGGACCCTGGTGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQFTPKG*DPGVSS
Trigger: GGAGGACACACCAGGGTCTCAGCCTTTTGGGGTGAA...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp GCACAAACTCTGGATCACTCTCACATTGCAAGACAAATTGTTTCCCTCCTTTTAGACAAGGCAGGGAGCTaGGCTGACCCCAAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: AQTLDHSHIARQIVSLLLDKAGS*ADPKPK
Trigger: CTTCGGCTTGGGGTCAGCTCAGCTCCCTGCCTTGTC...TAAAAGGAGGGAAACAATTTGTCTTGCAATGTGAGAGTGATCCAGAGTTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR TCA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCAACCAATGAGCCCCCATaGCATGAGGGGATGAATGAA +
Preference number: 4 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNATNEPP*HEGMNE
Trigger: TTCATTCATCCCCTCATGTCATGGGGGCTCATTGGT...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTACAGACAGAGACAAATaGGTGAGGAGGCACGTTCTC +
Preference number: 4 (lower is better)
Translates to: THTHTHGVFWRWPGNALATDRDK*VRRHVL
Trigger: GAGAACGTGCCTCCTCACTCATTTGTCTCTGTCTGT...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGACAACAAACCGATTGTaGATGTGTTCCAGACCCAGA +
Preference number: 4 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVTTNRL*MCSRPR
Trigger: TCTGGGTCTGGAACACATGCACAATCGGTTTGTTGT...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAACCAGCTGTGGGGGCCTaGAGGAGTGGTTATCTCTGT +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQPAVGA*RSGYLC
Trigger: ACAGAGATAACCACTCCTGCAGGCCCCCACAGCTGG...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAACGACGCAATAGCCGCTaGGCCTCCTTGAAGGTTTCG +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQRRNSR*ASLKVS
Trigger: CGAAACCTTCAAGGAGGCCCAGCGGCTATTGCGTCG...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CCA 90 bp ATAAACTGTTTCCGTTACTTCTTGCTGCCAGCGTTCAGAGATGACCAAAGGGAAGACCCTCCCTGTTTCTaGGTGCTAGAGGCCGTTGCT +
Preference number: 4 (lower is better)
Translates to: INCFRYFLLPAFRDDQREDPPCF*VLEAVA
Trigger: AGCAACGGCCTCTAGCACCCAGAAACAGGGAGGGTC...TTCCCTTTGGTCATCTCTGAACGCTGGCAGCAAGAAGTAACGGAAACAGTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR CCA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGTTAAGACTGATGACATaGGGGATTTCGCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVLRLMT*GISLVL
Trigger: GAGAACCAGCGAAATCCCCCATGTCATCAGTCTTAA...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCATTTTCTAAAAGGGAGTaGAGCCTTATGTTCTATTCT +
Preference number: 4 (lower is better)
Translates to: KGPDSSREPGGVPVANRSFSKRE*SLMFYS
Trigger: AGAATAGAACATAAGGCTCCACTCCCTTTTAGAAAA...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGAACATCCAAGTACTATaGCTGGGCATGGTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQNIQVL*LGMVAY
Trigger: GTAAGCCACCATGCCCAGCCATAGTACTTGGATGTT...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGGGGGTGTTTTGGAGATaGCCTGGTAATGCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQGVFWR*PGNALA
Trigger: AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCC...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCATCCCCAACTGACCAATaGGGCAATGCATTCACAGTG +
Preference number: 4 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNASPTDQ*GNAFTV
Trigger: CACTGTGAATGCATTGCCCCATTGGTCAGTTGGGGA...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCAGAGCAGCATCTCCCGTaGGATACTATTTCAGACGTG +
Preference number: 4 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNAEQHLP*DTISDV
Trigger: CACGTCTGAAATAGTATCCCACGGGAGATGCTGCTC...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CAA 72 bp TGTGTCTGGTCGCAGAAACACCTCCATCACAACATTTaGGCAGAAGGCACTCAAACCAGACCCCAACACAAC +
Preference number: 4 (lower is better)
Translates to: CVWSQKHLHHNI*AEGTQTRPQHN
Trigger: GTTGTGTTGGGGTCTGGTTTGAGTGCCTTCTGCCAAAATGTTGTGATGGAGGTGTTTCTGCGACCAGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp AATATCAAAGGCATCAGCAGCATTGACTTCTCCCCGGGGAGGAATCAAGGGTGGGTTCCAGACCCAGAATaGTTTCAGTGGCATAAAACC +
Preference number: 4 (lower is better)
Translates to: NIKGISSIDFSPGRNQGWVPDPE*FQWHKT
Trigger: GGTTTTATGCCACTGAAATCATTCTGGGTCTGGAAC...CCACCCTTGATTCCTCCCCGGGGAGAAGTCAATGCTGCTGATGCCTTTGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR TCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGGTTCCACATTCACGGTaGGTGTCATTCGGTCAATTT +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQVPHSR*VSFGQF
Trigger: AAATTGACCGAATGACACTCACCGTGAATGTGGAAC...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp ATAAACTGTTTCCGTTACTTCTTGCTGCCAGCGTTCAGAGATGACCAAAGGGAACCGTTGCTGTTTCTGTaGCAGAGGGATGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: INCFRYFLLPAFRDDQREPLLFL*QRDGFG
Trigger: CCCAAAGCCATCCCTCTGTCACAGAAACAGCAACGG...TTCCCTTTGGTCATCTCTGAACGCTGGCAGCAAGAAGTAACGGAAACAGTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR TCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCCTCAACTGCACATGCTaGGAACCTATGAGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLLNCTC*EPMSLR
Trigger: TCTCAAGCTCATAGGTTCTCAGCATGTGCAGTTGAG...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAGGCTGCAGTGAGCCATaGTCATCCCACTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQGCSEP*SSHCSP
Trigger: TGGAGAACAGTGGGATGATCATGGCTCACTGCAGCC...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGAATAAGGGGAAGGAATaGTGCTGTCCAGTTGTACCT +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQNKGKE*CCPVVP
Trigger: AGGTACAACTGGACAGCATCATTCCTTCCCCTTATT...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAAGGCAATGGCAAGGCTaGTGGTGGGGATTTGGCACA +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQRQWQG*WWGFGT
Trigger: TGTGCCAAATCCCCACCATCAGCCTTGCCATTGCCT...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCCAGTGTCTGCTTTCCTaGAACCATAAACTTCCCCGA +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLQCLLS*NHKLPR
Trigger: TCGGGGAAGTTTATGGTTGCAGGAAAGCAGACACTG...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCCAGTGTCTGCTTTCCTaGAACCATAAACTTCCCCGA +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPQCLLS*NHKLPR
Trigger: TCGGGGAAGTTTATGGTTGCAGGAAAGCAGACACTG...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTTTCAGCATGTACCCGTaGATAATACAGTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: THTHTHGVFWRWPGNALAFSMYP*IIQSFP
Trigger: GGGGAAGGACTGTATTATGCACGGGTACATGCTGAA...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGAACTCTTTCTTCCACTaGACAAACTCTGGATCACTC +
Preference number: 4 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVNSFFH*TNSGSL
Trigger: GAGTGATCCAGAGTTTGTGCAGTGGAAGAAAGAGTT...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CCA 90 bp GACTTTGTACGTGTTCTACAGCTTGCTTTGAGAAAGGATGTGAACAGGAAAGAATCACACTCCGGATACTaGGCTCCGGCAGGACGATCC +
Preference number: 4 (lower is better)
Translates to: DFVRVLQLALRKDVNRKESHSGY*APAGRS
Trigger: GGATCGTCCTGCCGGAGCCCAGTATCCGGAGTGTGA...TTCTTTCCTGTTCACATCCTTTCTCAAAGCAAGCTGTAGAACACGTACAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455558.2
CDS-3UTR CCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTAGGAGAGAAGGTGTCTaGAAGTTCCACATTCACGGT +
Preference number: 4 (lower is better)
Translates to: THTHTHGVFWRWPGNALARREGV*KFHIHG
Trigger: ACCGTGAATGTGGAACTTCCAGACACCTTCTCTCCT...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp AATATCAAAGGCATCAGCAGCATTGACTTCTCCCCGGGGAGGAATCAAGGGTGGCCACTGCACAAACTCTaGATCACTCTCACATTGCAA +
Preference number: 4 (lower is better)
Translates to: NIKGISSIDFSPGRNQGWPLHKL*ITLTLQ
Trigger: TTGCAATGTGAGAGTGATCCAGAGTTTGTGCAGTGG...CCACCCTTGATTCCTCCCCGGGGAGAAGTCAATGCTGCTGATGCCTTTGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR CCA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGCATCCCCCAGCAGTATaGAGCAAAGACATAGAAAAT +
Preference number: 4 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVHPPAV*SKDIEN
Trigger: ATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATG...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCACCCCTCACTCAGGGTaGGAGGTGTTAATTCATCAA +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPTPHSG*EVLIHQ
Trigger: TTGATGAATTAACACCTCCCACCCTGAGTGAGGGGT...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCAGGTCATACATACAATaGAAGGACAGTCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPRSYIQ*KDSLLC
Trigger: GCACAGGAGACTGTCCTTTCATTGTATGTATGACCT...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCGTTCCAGACCCAGAATaGTTTCAGTGGCATAAAACC +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPVPDPE*FQWHKT
Trigger: GGTTTTATGCCACTGAAATCATTCTGGGTCTGGAAC...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCGTGCCAACACTCGCATaGGGCTTCTTTTTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPVPTLA*GFFLEK
Trigger: TTTTTCCAAAAAGAAGCCTCATGCGAGTGTTGGCAC...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAGACCTCTCAGAAGTTTaGAAAGCATGCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQDLSEV*KACSPG
Trigger: CCCTGGGCTGCATGCTTTTCAAACTTCTGAGAGGTC...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTCTCTTTTACTTCCTGTaGGCCGCCTCCGTGACAGCC +
Preference number: 4 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVLFYFL*AASVTA
Trigger: GGCTGTCACGGAGGCGGCTCACAGGAAGTAAAAGAG...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTCTGACCGAGGTTTGTTaGGGAACTTCGGGGCACGAC +
Preference number: 4 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVLTEVC*GTSGHD
Trigger: GTCGTGCCCCGAAGTTCCTCAACAAACCTCGGTCAG...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAGAGCTCCACAGTACCTaGCCGAGGTTTGTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQELHST*PRFVEE
Trigger: TTCCTCAACAAACCTCGGTCAGGTACTGTGGAGCTC...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTAAATTGTCACGTCAGTaGATGGACCAATCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: THTHTHGVFWRWPGNALAKLSRQ*MDQSEA
Trigger: TGCCTCTGATTGGTCCATTCACTGACGTGACAATTT...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCCAAATGGCTTCTGAATaGGTTCAGCAGCTCCACATT +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPQMASE*VQQLHI
Trigger: AATGTGGAGCTGCTGAACTCATTCAGAAGCCATTTG...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp TTAACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGGCAGCAAATGGCTTCTaGATGAGTTCAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LTPGQEVSCEVHKRNTLWAANGF*MSSAAP
Trigger: TGGAGCTGCTGAACTCATTCAGAAGCCATTTGCTGC...CCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCGCTGGGTTCAAGTTGTaGCTTGTTGGTTTAGTGACT +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLAGFKL*LVGLVT
Trigger: AGTCACTAAACCAACAAGTCACAACTTGAACCCAGC...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR GCA 90 bp GGTCAGGGAGGGAGGAATGTTATTTGTGGCGTTGTTTTGAAACATCCTGTGCTGCAGTGTCTGCTTTCCTaGAACCATAAACTTCCCCGA +
Preference number: 4 (lower is better)
Translates to: GQGGRNVICGVVLKHPVLQCLLS*NHKLPR
Trigger: TCGGGGAAGTTTATGGTTGCAGGAAAGCAGACACTG...CAGCACAGGATGTTTCAAAACAACGCCACAAATAACATTCCTCCCTCCCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455558.2
CDS-3UTR GCA 90 bp ATTTTGCCGGGACTCTCCCTCTCCTCTCCATTCAAGTCTATTTGGAAAGAGGTATCCGTTACTTCTTGCTaGCAGCGTTCAGAGATGACC +
Preference number: 4 (lower is better)
Translates to: ILPGLSLSSPFKSIWKEVSVTSC*QRSEMT
Trigger: GGTCATCTCTGAACGCTGGCAGCAAGAAGTAACGGA...TACCTCTTTCCAAATAGACTTGAATGGAGAGGAGAGGGAGAGTCCCGGCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR GCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGAACTCTTTCTTCCACTaGACAAACTCTGGATCACTC +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQNSFFH*TNSGSL
Trigger: GAGTGATCCAGAGTTTGTGCAGTGGAAGAAAGAGTT...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGAAGTCAGTTGCGAAGTaGACAAAAGAAACACACTGT +
Preference number: 4 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVKSVAK*TKETHC
Trigger: ACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTT...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCGAACAATGGCTTTTCTaGTTCTGGAGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLEQWLF*FWSVCV
Trigger: CACACACACACTCCAGAAGCAGAAAAGCCATTGTTC...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACGCCTCCATGGGAGGGTaGCAGAGGGTAGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: FNKGNLKFGSLRFSISANASMGG*QRVGRG
Trigger: GCCTCTGCCTACCCTCTGGCACCCTCCCATGGAGGC...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGCATGAGGCTTCTTTTTaGAAAAATCGCAGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQHEASF*KNRRQD
Trigger: GTCTTGCCTGCGATTTTTCCAAAAAGAAGCCTCATG...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCCCACTGAGTCAGAAATaGGTTTCCCAGTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPPLSQK*VSQFQH
Trigger: ATGCTGAAACTGGGAAACCCATTTCTGACTCAGTGG...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp TTAACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGTCATCAGATCCAGGATaGAGCAGAGTTTATCTGGGG +
Preference number: 4 (lower is better)
Translates to: LTPGQEVSCEVHKRNTLWSSDPG*SRVYLG
Trigger: CCCCAGATAAACTCTGCTTCATCCTGGATCTGATGA...CCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTGCCAGTCAACACCTTTaGAAAAGCTGTGCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: THTHTHGVFWRWPGNALAASQHL*KSCALL
Trigger: TAAAAGAGCACAGCTTTTTCAAAGGTGTTGACTGGC...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTCCGTTGCTGTTTCTGTaGCAGAGGGATGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVPLLFL*QRDGFG
Trigger: CCCAAAGCCATCCCTCTGTCACAGAAACAGCAACGG...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCACCAATGATGGACGGATaGATGCCTTCAATGATTAGT +
Preference number: 4 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNAPMMDG*MPSMIS
Trigger: ACTAATCATTGAAGGCATTCATCCGTCCATCATTGG...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTGATCTAGAACAGGCATaGGGCCCAGCGCATCCTCAA +
Preference number: 4 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVDLEQA*GPAHPQ
Trigger: TTGAGGATGCGCTGGGCCTCATGCCTGTTCTAGATC...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAAATTCAAGGCTGCAGTaGGCCATGATCATCCCACTG +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQNSRLQ*AMIIPL
Trigger: CAGTGGGATGATCATGGCTCACTGCAGCCTTGAATT...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCACATTACTTTGTAGATaGCCAGTGTGGCCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPTLLCR*PVWPSN
Trigger: GTTTGAAGGCCACACTGGTCATCTACAAAGTAATGT...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTTCCCTGAACGTAACTaGGACAACACTGCATATGAT +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLFPERN*DNTAYD
Trigger: ATCATATGCAGTGTTGTCTCAGTTACGTTCAGGGAA...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCAGTTTCAGTCATGTATaGGGGCGCTTACCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLSFSHV*GRLPLR
Trigger: TCTTAAAGGTAAGCGCCCTCATACATGACTGAAACT...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGCATTTTTCCAGTGTCTaGTTTCCTGCAACCATAAAC +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQHFSSV*FPATIN
Trigger: GTTTATGGTTGCAGGAAAGCAGACACTGGAAAAATG...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp TTAACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGGTTTCCGTTACTTCTTaGTGCCAGCGTTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: LTPGQEVSCEVHKRNTLWVSVTS*CQRSEM
Trigger: CATCTCTGAACGCTGGCAGCAAGAAGTAACGGAAAC...CCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCACAGAATATGTGGCAATaGTTAGGGCAATCTGTTACC +
Preference number: 4 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNAQNMWQ*LGQSVT
Trigger: GGTAACAGATTGCCCTAAGCATTGCCACATATTCTG...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCGGACAAGAAGTCAGTTaGGAAGTGCACAAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPGQEVS*EVHKRN
Trigger: GTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCC...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCCTGTCTTCAGCAAAATaGTTCCTTTCCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPLSSAK*FLSSVH
Trigger: ATGCACTGAGGAAAGGAAGCATTTTGCTGAAGACAG...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGATACTATTTCAGACGTaGACTAGTGAGTGTATACTG +
Preference number: 4 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVILFQT*TSECIL
Trigger: CAGTATACACTCACTAGTGCACGTCTGAAATAGTAT...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp TTAACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGAGGAGAGAAGGTGTCTaGAAGTTCCACATTCACGGT +
Preference number: 4 (lower is better)
Translates to: LTPGQEVSCEVHKRNTLWRREGV*KFHIHG
Trigger: ACCGTGAATGTGGAACTTCCAGACACCTTCTCTCCT...CCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGACTAGACAGAATATGTaGCAATGCTTAGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQTRQNM*QCLGQS
Trigger: AGATTGCCCTAAGCATTGCCACATATTCTGTCTAGT...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CCA 90 bp TTAACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTGATGGTGGGGATTTaGCACAATAAGGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LTPGQEVSCEVHKRNTLWLMVGI*HNKGKE
Trigger: TTCCTTCCCCTTATTGTGCCAAATCCCCACCATCAG...CCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAGAACACACCGTGTTGTaGAAGGTGGTAGTGCAAATC +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQEHTVL*KVVVQI
Trigger: GATTTGCACTACCACCTTTCACAACACGGTGTGTTC...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp ATAAACTGTTTCCGTTACTTCTTGCTGCCAGCGTTCAGAGATGACCAAAGGGAAGGCAAGACCAAGATCTaGTATTCTTGCGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: INCFRYFLLPAFRDDQREGKTKI*YSCVSM
Trigger: CATGGACACGCAAGAATATCAGATCTTGGTCTTGCC...TTCCCTTTGGTCATCTCTGAACGCTGGCAGCAAGAAGTAACGGAAACAGTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR TCA 90 bp TTAACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGGTTCCACATTCACGGTaGGTGTCATTCGGTCAATTT +
Preference number: 4 (lower is better)
Translates to: LTPGQEVSCEVHKRNTLWVPHSR*VSFGQF
Trigger: AAATTGACCGAATGACACTCACCGTGAATGTGGAAC...CCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCATAGAAAATCAGCAGTaGCTAGACAGAATATGTGGC +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPIENQQ*LDRICG
Trigger: GCCACATATTCTGTCTAGTCACTGCTGATTTTCTAT...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCACAGCCAAGTATACCATaGTGTTTAATCCAACTGACT +
Preference number: 4 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNAQPSIP*CLIQLT
Trigger: AGTCAGTTGGATTAAACATCATGGTATACTTGGCTG...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGGGTGACATAATAAGCTaGCTTCTAGAAGTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQGDIIS*LLEVLL
Trigger: CAACAAAACTTCTAGAAGTCAGCTTATTATGTCACC...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAGAGGCCTGTTACTCTTaGCAGTTTTACCAGGACTTC +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQEACYS*QFYQDF
Trigger: GAAGTCCTGGTAAAACTGTCAAGAGTAACAGGCCTC...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACGTGTGCTGCCCGACGTaGCGAAAGACATGCATGCGC +
Preference number: 4 (lower is better)
Translates to: FNKGNLKFGSLRFSISANVCCPT*RKTCMR
Trigger: GCGCATGCATGTCTTTCGTCACGTCGGGCAGCACAC...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp CCTGCAACCATAAACTTCCCCGAATCCTCCTCGTCCAATAATCCTATGCACACTAAATTTGTCGACTTCTaGAAAGGCGGTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PATINFPESSSSNNPMHTKFVDF*KGGLPH
Trigger: ATGAGGAAGACCGCCTTTGCAGAAGTCGACAAATTT...AGTGTGCATAGGATTATTGGACGAGGAGGATTCGGGGAAGTTTATGGTTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455558.2
CDS-3UTR GCA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCACGTCCAATAATCCTATaGACACTGAACTCATTCATG +
Preference number: 4 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNARPIIL*TLNSFM
Trigger: CATGAATGAGTTCAGTGTGCATAGGATTATTGGACG...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTCATTTTTCCAGTGTCTaGTTTCCTGCAACCATAAAC +
Preference number: 4 (lower is better)
Translates to: THTHTHGVFWRWPGNALAHFSSV*FPATIN
Trigger: GTTTATGGTTGCAGGAAAGCAGACACTGGAAAAATG...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp TTTTCCAGTGTCTGCTTTCCTGCAACCATAAACTTCCCCGAATCCTCCTCGTCCCATTTTTCCAGTGTCTaGTTTCCTGCAACCATAAAC +
Preference number: 4 (lower is better)
Translates to: FSSVCFPATINFPESSSSHFSSV*FPATIN
Trigger: GTTTATGGTTGCAGGAAAGCAGACACTGGAAAAATG...GGACGAGGAGGATTCGGGGAAGTTTATGGTTGCAGGAAAGCAGACACTGGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455558.2
CDS-3UTR GCA 90 bp TCATCAAATGAGCCAATATCAAAGGCATCAGCAGCATTGACTTCTCCCCGGGGACAGAATATGTGGCAATaGTTAGGGCAATCTGTTACC +
Preference number: 4 (lower is better)
Translates to: SSNEPISKASAALTSPRGQNMWQ*LGQSVT
Trigger: GGTAACAGATTGCCCTAAGCATTGCCACATATTCTG...TCCCCGGGGAGAAGTCAATGCTGCTGATGCCTTTGATATTGGCTCATTTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR GCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTAAGTCAGTTGCGAAGTaGACAAAAGAAACACACTGT +
Preference number: 4 (lower is better)
Translates to: THTHTHGVFWRWPGNALAKSVAK*TKETHC
Trigger: ACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTT...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCATTGTTTGTTGCTGCTaGTGTCTTCAGCAAAATGCT +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLIVCCC*CLQQNA
Trigger: AGCATTTTGCTGAAGACAGCAGCAGCAACAAACAAT...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTACCATTGTTTGTTGCTaGTGCTGTCTTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: THTHTHGVFWRWPGNALATIVCC*CCLQQN
Trigger: ATTTTGCTGAAGACAGCAGCAGCAACAAACAATGGT...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGCAAGAGAATATTTGCTaGCTTCAAATCTCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQQENIC*LQISVD
Trigger: GTCTACAGAGATTTGAAGCCAGCAAATATTCTCTTG...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTTTAATCCCATACACTTaGATAGTACGTGTCCGTCAT +
Preference number: 4 (lower is better)
Translates to: THTHTHGVFWRWPGNALALIPYT*IVRVRH
Trigger: ATGACGGACACGTACTATCCAAGTGTATGGGATTAA...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp TCATCAAATGAGCCAATATCAAAGGCATCAGCAGCATTGACTTCTCCCCGGGGACAGAGTCAGAAAAGCTaGGTTCAAGTTGTGACTTGT +
Preference number: 4 (lower is better)
Translates to: SSNEPISKASAALTSPRGQSQKS*VQVVTC
Trigger: ACAAGTCACAACTTGAACCCAGCTTTTCTGACTCTG...TCCCCGGGGAGAAGTCAATGCTGCTGATGCCTTTGATATTGGCTCATTTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR TCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCTTCTATGTATGGCTaGAAAAGAGTTGATGTCACT +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLSSMYG*KRVDVT
Trigger: AGTGACATCAACTCTTTTTCAGCCATACATAGAAGA...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACAGGCATCAGCAGCATTaGCTTCTCCCCGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: FNKGNLKFGSLRFSISANRHQQH*LLPGEE
Trigger: TTCCTCCCCGGGGAGAAGTCAATGCTGCTGATGCCT...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCAGATGCATGACGACATaGAAGTCAATATACACAGTT +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPRCMTT*KSIYTV
Trigger: AACTGTGTATATTGACTTTCATGTCGTCATGCATCT...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTTCATCAAGCATCTCTaGATGACACAGAAACATTTC +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLFIKHL*MTQKHF
Trigger: GAAATGTTTCTGTGTCATTCAGAGATGCTTGATGAA...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCAACAGAAATCCTTTTATaGGATAGCCAGTCCAGAATA +
Preference number: 4 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNATEILL*DSQSRI
Trigger: TATTCTGGACTGGCTATCTCATAAAAGGATTTCTGT...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCCTAGTGAGTGTATACTaGGAAGGGATTATAAACCTT +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLLVSVY*EGIINL
Trigger: AAGGTTTATAATCCCTTCTCAGTATACACTCACTAG...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGATCCAAGAGAATATTTaGTGGCTTCAAATCTCTGTA +
Preference number: 4 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQIQENI*WLQISV
Trigger: TACAGAGATTTGAAGCCAGCAAATATTCTCTTGGAT...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAACTGACGTGGGAGGATTaGTTGAACCTAGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQLTWED*LNLGIQ
Trigger: TTGAATTCCTAGGTTCAAGCAATCCTCCCACGTCAG...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCTTTCTAAGCACAGCTTaGCTTTTTCAAAGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPFLSTA*LFQRVK
Trigger: CTTCACTCTTTGAAAAAGGCAAGCTGTGCTTAGAAA...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp TTAACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGTCCATCACAACATTTTaGCAGAAGGCACTCAAACCA +
Preference number: 4 (lower is better)
Translates to: LTPGQEVSCEVHKRNTLWSITTF*QKALKP
Trigger: TGGTTTGAGTGCCTTCTGCCAAAATGTTGTGATGGA...CCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTGAACACACCGTGTTGTaGAAGGTGGTAGTGCAAATC +
Preference number: 4 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVEHTVL*KVVVQI
Trigger: GATTTGCACTACCACCTTTCACAACACGGTGTGTTC...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAACATGACATGAGGGGATaGATGAACCAAAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQHDMRG*MNQREC
Trigger: ACATTCTCTTTGGTTCATTCATCCCCTCATGTCATG...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAGCCTTTTTCAAAGAGTaGAGGTGGCCTTTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQAFFKE*RWPFCL
Trigger: TAAACAGAAAGGCCACCTTCACTCTTTGAAAAAGGC...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTATCCAAGAGAATATTTaGTGGCTTCAAATCTCTGTA +
Preference number: 4 (lower is better)
Translates to: THTHTHGVFWRWPGNALAIQENI*WLQISV
Trigger: TACAGAGATTTGAAGCCAGCAAATATTCTCTTGGAT...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp TTAACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCCTTTGAAAAAGCTGTaGTCTTTTACTTCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LTPGQEVSCEVHKRNTLWPLKKL*SFTSCE
Trigger: CTCACAGGAAGTAAAAGAGCACAGCTTTTTCAAAGG...CCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTTTCAGCATGTACCCGTaGATAATACAGTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVFSMYP*IIQSFP
Trigger: GGGGAAGGACTGTATTATGCACGGGTACATGCTGAA...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAGGACAAGAAGTCAGTTaGGAAGTGCACAAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQGQEVS*EVHKRN
Trigger: GTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCC...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACCTGCATGCCAGGTACTaGTTGTCGACTCGTGCACAC +
Preference number: 4 (lower is better)
Translates to: FNKGNLKFGSLRFSISANLHARY*LSTRAH
Trigger: GTGTGCACGAGTCGACAAGCAGTACCTGGCATGCAG...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp ATAAACTGTTTCCGTTACTTCTTGCTGCCAGCGTTCAGAGATGACCAAAGGGAACATGAGGCTTCTTTTTaGAAAAATCGCAGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: INCFRYFLLPAFRDDQREHEASF*KNRRQD
Trigger: GTCTTGCCTGCGATTTTTCCAAAAAGAAGCCTCATG...TTCCCTTTGGTCATCTCTGAACGCTGGCAGCAAGAAGTAACGGAAACAGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR CCA 90 bp ACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCGACCTTTTTAATAGTTaGAGTGTAATAAGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: TPGQEVSCEVHKRNTLWLDLFNS*SVIRVN
Trigger: GTTCACCCTTATTACACTCCAACTATTAAAAAGGTC...GAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTTGTCACGTCAGTGAATaGACCAATCAGAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVCHVSE*TNQRHE
Trigger: CTCATGCCTCTGATTGGTCCATTCACTGACGTGACA...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCATTATAAACCTTCCCTaGCACAACAGATACAAAAAG +
Preference number: 4 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPIINLP*HNRYKK
Trigger: CTTTTTGTATCTGTTGTGCCAGGGAAGGTTTATAAT...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CAA 72 bp GGCATATGTCAGACCAGAAATCAAGCTACATCTTGTTaGCAACAAACAGACCATTGTTTGTTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GICQTRNQATSC*QQTDHCLLLLL
Trigger: CAGCAGCAGCAACAAACAATGGTCTGTTTGTTGCAAACAAGATGTAGCTTGATTTCTGGTCTGACATATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CAA 72 bp TGCATTTACTGCTTCATAAACTGTTTCCGTTACTTCTaGCTGCCAGCGTTCAGAGATGACCAAAGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: CIYCFINCFRYF*LPAFRDDQREV
Trigger: AACTTCCCTTTGGTCATCTCTGAACGCTGGCAGCAAGAAGTAACGGAAACAGTTTATGAAGCAGTAAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR TCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAATGGCTGAAAAAGAGTTaGTGTCACTTGTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQWLKKS*CHLFLG
Trigger: TCCAAGAAACAAGTGACATCAACTCTTTTTCAGCCA...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR TCA 90 bp TTAACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGAGAAATTCTAGTTTTTaGAAGAGATGCGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: LTPGQEVSCEVHKRNTLWRNSSF*KRCGSA
Trigger: AGCTGATCCGCATCTCTTTCAAAAACTAGAATTTCT...CCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp ATAAACTGTTTCCGTTACTTCTTGCTGCCAGCGTTCAGAGATGACCAAAGGGAACGTCCAATAATCCTATaGACACTGAACTCATTCATG +
Preference number: 4 (lower is better)
Translates to: INCFRYFLLPAFRDDQRERPIIL*TLNSFM
Trigger: CATGAATGAGTTCAGTGTGCATAGGATTATTGGACG...TTCCCTTTGGTCATCTCTGAACGCTGGCAGCAAGAAGTAACGGAAACAGTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR GCA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACAACAAACCGATTGTaGATGTGTTCCAGACCCAGA +
Preference number: 4 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVTTNRL*MCSRPR
Trigger: TCTGGGTCTGGAACACATGCACAATCGGTTTGTTGT...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR GCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACGACGAAAGACATGCATaGGCCTCTCAGCACAGACCA +
Preference number: 4 (lower is better)
Translates to: FNKGNLKFGSLRFSISANDERHA*ASQHRP
Trigger: TGGTCTGTGCTGAGAGGCGCATGCATGTCTTTCGTC...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTCCACTGCACAAACTCTaGATCACTCTCACATTGCAA +
Preference number: 4 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVPLHKL*ITLTLQ
Trigger: TTGCAATGTGAGAGTGATCCAGAGTTTGTGCAGTGG...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACCTCAGGAGGCTGACGTaGGAGGATTGCTTGAACCTA +
Preference number: 4 (lower is better)
Translates to: FNKGNLKFGSLRFSISANLRRLT*EDCLNL
Trigger: TAGGTTCAAGCAATCCTCCCACGTCAGCCTCCTGAG...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CAA 72 bp GGAAAGAAGTTCCTTCATGATGTAGGCATCATAAATTaGTCGACTTCTGCAAAGGCGGTCTTCCTCATTATC +
Preference number: 4 (lower is better)
Translates to: GKKFLHDVGIIN*STSAKAVFLII
Trigger: GATAATGAGGAAGACCGCCTTTGCAGAAGTCGACAAATTTATGATGCCTACATCATGAAGGAACTTCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455558.2
CDS-3UTR TCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAGATGAATGCCTTCAATaGTTAGTTAATCCCATACAC +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQDECLQ*LVNPIH
Trigger: GTGTATGGGATTAACTAATCATTGAAGGCATTCATC...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACTGTCACAGATCCCAGTaGAGCCCAAATCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: FNKGNLKFGSLRFSISANCHRSQ*SPNHLP
Trigger: TGGGAGATGATTTGGGCTTCACTGGGATCTGTGACA...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTAAGATCAACTGTTGTTaGAAACAGTCCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVKINCC*KQSMVV
Trigger: CACCACCATGGACTGTTTTCAACAACAGTTGATCTT...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACACAGAGACAAATGAGTaGGGAGGCACGTTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: FNKGNLKFGSLRFSISANTETNE*GGTFSH
Trigger: GTGAGAGAACGTGCCTCCTCACTCATTTGTCTCTGT...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAATAATTAACCAGGGCTaGGAAGACATTCACTCTTTA +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQIINQG*EDIHSL
Trigger: TAAAGAGTGAATGTCTTCCCAGCCCTGGTTAATTAT...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAAGGCAATTTAAAATTTaGGAGCCTGCGTTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQRQFKI*EPAFLN
Trigger: ATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCT...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAGAGATTGTTAGATACTaGAGCGCTAACTCTACTATA +
Preference number: 4 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQEIVRY*SANSTI
Trigger: TATAGTAGAGTTAGCGCTCCAGTATCTAACAATCTC...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp GACTTTGTACGTGTTCTACAGCTTGCTTTGAGAAAGGATGTGAACAGGAAAGAAACGTGTTCTACAGCTTaGTTTGAGAAAGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: DFVRVLQLALRKDVNRKETCSTA*FEKGCE
Trigger: TTCACATCCTTTCTCAAAGCAAGCTGTAGAACACGT...TTCTTTCCTGTTCACATCCTTTCTCAAAGCAAGCTGTAGAACACGTACAAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455558.2
CDS-3UTR GCA 90 bp GACTTTGTACGTGTTCTACAGCTTGCTTTGAGAAAGGATGTGAACAGGAAAGAACGTCCAATAATCCTATaGACACTGAACTCATTCATG +
Preference number: 4 (lower is better)
Translates to: DFVRVLQLALRKDVNRKERPIIL*TLNSFM
Trigger: CATGAATGAGTTCAGTGTGCATAGGATTATTGGACG...TTCTTTCCTGTTCACATCCTTTCTCAAAGCAAGCTGTAGAACACGTACAAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455558.2
CDS-3UTR GCA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTTGTCGTACAGCCCAGTaGAAAGTATCATTCATTCAT +
Preference number: 4 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVCRTAQ*KVSFIH
Trigger: ATGAATGAATGATACTTTGCACTGGGCTGTACGACA...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp TGGATAAATGACTTTGTACGTGTTCTACAGCTTGCTTTGAGAAAGGATGTGAACTGGCTGAAAAAGAGTTaGTGTCACTTGTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: WINDFVRVLQLALRKDVNWLKKS*CHLFLG
Trigger: TCCAAGAAACAAGTGACATCAACTCTTTTTCAGCCA...GTTCACATCCTTTCTCAAAGCAAGCTGTAGAACACGTACAAAGTCATTTATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455558.2
CDS-3UTR TCA 90 bp GACTTTGTACGTGTTCTACAGCTTGCTTTGAGAAAGGATGTGAACAGGAAAGAATCTTCTATGTATGGCTaGAAAAGAGTTGATGTCACT +
Preference number: 4 (lower is better)
Translates to: DFVRVLQLALRKDVNRKESSMYG*KRVDVT
Trigger: AGTGACATCAACTCTTTTTCAGCCATACATAGAAGA...TTCTTTCCTGTTCACATCCTTTCTCAAAGCAAGCTGTAGAACACGTACAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455558.2
CDS-3UTR TCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACGTGCCAACACTCGCATaGGGCTTCTTTTTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: FNKGNLKFGSLRFSISANVPTLA*GFFLEK
Trigger: TTTTTCCAAAAAGAAGCCTCATGCGAGTGTTGGCAC...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACCTGATAGGCAGCAAATaGCTTCTGAATGAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: FNKGNLKFGSLRFSISANLIGSK*LLNEFS
Trigger: GCTGAACTCATTCAGAAGCCATTTGCTGCCTATCAG...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
3UTR CAA 72 bp ATATGGCATATGTCAGACCAGAAATCAAGCTACATCTaGTTTGCAACAAACAGACCATTGTTTGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: IWHMSDQKSSYI*FATNRPLFVAA
Trigger: AGCAGCAACAAACAATGGTCTGTTTGTTGCAAACAAGATGTAGCTTGATTTCTGGTCTGACATATGCCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACTGGCTGAAAAAGAGTTaGTGTCACTTGTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: FNKGNLKFGSLRFSISANWLKKS*CHLFLG
Trigger: TCCAAGAAACAAGTGACATCAACTCTTTTTCAGCCA...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR TCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACAGTATCATTCATTCATaGCAGATGCATGACGACATG +
Preference number: 4 (lower is better)
Translates to: FNKGNLKFGSLRFSISANSIIHS*QMHDDM
Trigger: CATGTCGTCATGCATCTGTCATGAATGAATGATACT...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR GCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACACGTGTTCTACAGCTTaGTTTGAGAAAGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: FNKGNLKFGSLRFSISANTCSTA*FEKGCE
Trigger: TTCACATCCTTTCTCAAAGCAAGCTGTAGAACACGT...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CCA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACCAAGAGAATATTTGCTaGCTTCAAATCTCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: FNKGNLKFGSLRFSISANQENIC*LQISVD
Trigger: GTCTACAGAGATTTGAAGCCAGCAAATATTCTCTTG...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCCCATGTTGGCGAGCTTaGGCGGCGGCGGCGGCGGTT +
Preference number: 5 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPPCWRA*AAAAAV
Trigger: AACCGCCGCCGCCGCCGCCAAAGCTCGCCAACATGG...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp GGACCCTCCCTGTTTCTGGGTGCTAGAGGCCGTTGCTGTTTCTGTGACAGAGGGAAGGCATCAGCAGCATaGACTTCTCCCCGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: GPSLFLGARGRCCFCDRGKASAA*TSPRGG
Trigger: TCCTCCCCGGGGAGAAGTCAATGCTGCTGATGCCTT...CCCTCTGTCACAGAAACAGCAACGGCCTCTAGCACCCAGAAACAGGGAGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR CAA 90 bp ATTTTGCCGGGACTCTCCCTCTCCTCTCCATTCAAGTCTATTTGGAAAGAGGTACCATGTTGGCGAGCTTaGGCGGCGGCGCCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: ILPGLSLSSPFKSIWKEVPCWRA*AAAPPP
Trigger: GGGCGGCGGCGCCGCCGCCAAAGCTCGCCAACATGG...TACCTCTTTCCAAATAGACTTGAATGGAGAGGAGAGGGAGAGTCCCGGCAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR CAA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCAAGAAAGACAGCCCCTTaGGGCCAGCTGTGGGGGCCT +
Preference number: 5 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNARKTAP*GQLWGP
Trigger: AGGCCCCCACAGCTGGCCCAAAGGGGCTGTCTTTCT...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp GGACCCTCCCTGTTTCTGGGTGCTAGAGGCCGTTGCTGTTTCTGTGACAGAGGGCATCCTCTCAGAAGTTaGAAAAGCATGCAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GPSLFLGARGRCCFCDRGHPLRS*KSMQPR
Trigger: CCTGGGCTGCATGCTTTTCAAACTTCTGAGAGGATG...CCCTCTGTCACAGAAACAGCAACGGCCTCTAGCACCCAGAAACAGGGAGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR CAA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCAAAAGTTCATTGTGACTaGAGGAAGCCAAGGAGTACC +
Preference number: 5 (lower is better)
Translates to: KGPDSSREPGGVPVANRSKVHCD*RKPRST
Trigger: GGTACTCCTTGGCTTCCTCAAGTCACAATGAACTTT...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp GGACCCTCCCTGTTTCTGGGTGCTAGAGGCCGTTGCTGTTTCTGTGACAGAGGGGTTCTACAGCTTGCTTaGAGAAAGGATGTGAACAGG +
Preference number: 5 (lower is better)
Translates to: GPSLFLGARGRCCFCDRGVLQLA*RKDVNR
Trigger: CCTGTTCACATCCTTTCTCAAAGCAAGCTGTAGAAC...CCCTCTGTCACAGAAACAGCAACGGCCTCTAGCACCCAGAAACAGGGAGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR CAA 90 bp AAGGGTCCCGACTCCTCTCGGGAGCCTGGAGGAGTCCCGGTAGCGAATAGATCACATCCAAGAGAATATTaGCTGGCTTCAAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: KGPDSSREPGGVPVANRSHPREY*LASNLC
Trigger: ACAGAGATTTGAAGCCAGCAAATATTCTCTTGGATG...TGATCTATTCGCTACCGGGACTCCTCCAGGCTCCCGAGAGGAGTCGGGACCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CAA 90 bp GGACCCTCCCTGTTTCTGGGTGCTAGAGGCCGTTGCTGTTTCTGTGACAGAGGGTGCCAGTCAACACCTTaGAAAAAGCTGTGCTCTTTT +
Preference number: 5 (lower is better)
Translates to: GPSLFLGARGRCCFCDRGCQSTP*KKLCSF
Trigger: AAAAGAGCACAGCTTTTTCAAAGGTGTTGACTGGCA...CCCTCTGTCACAGAAACAGCAACGGCCTCTAGCACCCAGAAACAGGGAGGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR CAA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTGTACCTGACCGAGGTTaGTTGAGGAACTTCGGGGCA +
Preference number: 5 (lower is better)
Translates to: THTHTHGVFWRWPGNALAVPDRG*LRNFGA
Trigger: TGCCCCGAAGTTCCTCAACAAACCTCGGTCAGGTAC...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGTGTTTCCGTTACTTCTaGCTGCCAGCGTTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVCFRYF*LPAFRD
Trigger: ATCTCTGAACGCTGGCAGCAAGAAGTAACGGAAACA...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CAA 90 bp TTAACCCCAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGGACAGAGGGATGGCTTaGGGAGCTCCACAGTACCTG +
Preference number: 5 (lower is better)
Translates to: LTPGQEVSCEVHKRNTLWDRGMA*GAPQYL
Trigger: CAGGTACTGTGGAGCTCCCAAAGCCATCCCTCTGTC...CCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTGGGGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CAA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAGACAGAGGGATGGCTTaGGGAGCTCCACAGTACCTG +
Preference number: 5 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQDRGMA*GAPQYL
Trigger: CAGGTACTGTGGAGCTCCCAAAGCCATCCCTCTGTC...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CAA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCAACGTGGGAGGATTGCTaGAACCTAGGAATTCAAGGC +
Preference number: 5 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNATWEDC*NLGIQG
Trigger: GCCTTGAATTCCTAGGTTCAAGCAATCCTCCCACGT...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTGCTGACGTGGGAGGATaGCTTGAACCTAGGAATTCA +
Preference number: 5 (lower is better)
Translates to: THTHTHGVFWRWPGNALAADVGG*LEPRNS
Trigger: TGAATTCCTAGGTTCAAGCAATCCTCCCACGTCAGC...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGAAGCCTTTGCGGTACTaGTCAACAAGCAAGAAGCCT +
Preference number: 5 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQKPLRY*STSKKP
Trigger: AGGCTTCTTGCTTGTTGACAAGTACCGCAAAGGCTT...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS CCA 90 bp GAGCCATGTACCCATGGGTGCCAACACTCGCATGAGGCTTCTTTTTaGAAAAATCGCAGGCAAGACCAAGATCTGATATTCTTGCGTGTC +
Preference number: 5 (lower is better)
Translates to: EPCTHGCQHSHEASF*KNRRQDQDLIFLRV
Trigger: GACACGCAAGAATATCAGATCTTGGTCTTGCCTGCGATTTTTCCAAAAAGAAGCCTCATGCGAGTGTTGGCACCCATGGGTACATGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CAA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGTGGATCACTCTCACATaGCAAGACAAATTGTTTCCC +
Preference number: 5 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVWITLT*QDKLFP
Trigger: GGGAAACAATTTGTCTTGCAATGTGAGAGTGATCCA...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CAA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAAGCCGCTGGGCCTCCTaGAAGGTTTCGTTCAACTCT +
Preference number: 5 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQSRWAS*KVSFNS
Trigger: AGAGTTGAACGAAACCTTCAAGGAGGCCCAGCGGCT...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CAA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAGTACCTGACCGAGGTTaGTTGAGGAACTTCGGGGCA +
Preference number: 5 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQVPDRG*LRNFGA
Trigger: TGCCCCGAAGTTCCTCAACAAACCTCGGTCAGGTAC...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CAA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGGTTAATCCCATACACTaGGATAGTACGTGTCCGTCA +
Preference number: 5 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQVNPIH*DSTCPS
Trigger: TGACGGACACGTACTATCCAAGTGTATGGGATTAAC...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCACTCCATCACAACATTTaGGCAGAAGGCACTCAAACC +
Preference number: 5 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNALHHNI*AEGTQT
Trigger: GGTTTGAGTGCCTTCTGCCAAAATGTTGTGATGGAG...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp AATATCAAAGGCATCAGCAGCATTGACTTCTCCCCGGGGAGGAATCAAGGGTGGGTCTTTGGTTTTATGTaGTCTGAAAGGGCTGTGACG +
Preference number: 5 (lower is better)
Translates to: NIKGISSIDFSPGRNQGWVFGFM*SERAVT
Trigger: CGTCACAGCCCTTTCAGACAACATAAAACCAAAGAC...CCACCCTTGATTCCTCCCCGGGGAGAAGTCAATGCTGCTGATGCCTTTGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR CAA 90 bp CAGGACAAGAAGTCAGTTGCGAAGTGCACAAAAGAAACACACTGTGGCTCTCCCGTTCTACAGCTTGCTTaGAGAAAGGATGTGAACAGG +
Preference number: 5 (lower is better)
Translates to: QDKKSVAKCTKETHCGSPVLQLA*RKDVNR
Trigger: CCTGTTCACATCCTTTCTCAAAGCAAGCTGTAGAAC...GGGAGAGCCACAGTGTGTTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CAA 90 bp AATATCAAAGGCATCAGCAGCATTGACTTCTCCCCGGGGAGGAATCAAGGGTGGCAAGATCTGATATTCTaGCGTGTCCATGTTCATCCA +
Preference number: 5 (lower is better)
Translates to: NIKGISSIDFSPGRNQGWQDLIF*RVHVHP
Trigger: TGGATGAACATGGACACGCAAGAATATCAGATCTTG...CCACCCTTGATTCCTCCCCGGGGAGAAGTCAATGCTGCTGATGCCTTTGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR CAA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGTGGATCACTCTCACATaGCAAGACAAATTGTTTCCC +
Preference number: 5 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQWITLT*QDKLFP
Trigger: GGGAAACAATTTGTCTTGCAATGTGAGAGTGATCCA...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CAA 90 bp GCACAAACTCTGGATCACTCTCACATTGCAAGACAAATTGTTTCCCTCCTTTTACCTGACCGAGGTTTGTaGAGGAACTTCGGGGCACGA +
Preference number: 5 (lower is better)
Translates to: AQTLDHSHIARQIVSLLLPDRGL*RNFGAR
Trigger: TCGTGCCCCGAAGTTCCTCAACAAACCTCGGTCAGG...TAAAAGGAGGGAAACAATTTGTCTTGCAATGTGAGAGTGATCCAGAGTTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR CAA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTTCCAGAATAAAGCCTTaGCGGTACTTGTCAACAAGC +
Preference number: 5 (lower is better)
Translates to: THTHTHGVFWRWPGNALASRIKP*RYLSTS
Trigger: GCTTGTTGACAAGTACCGCAAAGGCTTTATTCTGGA...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp ACACACACACACACACACGGGGTGTTTTGGAGATGGCCTGGTAATGCTTTAGCTCAAGATCTGATATTCTaGCGTGTCCATGTTCATCCA +
Preference number: 5 (lower is better)
Translates to: THTHTHGVFWRWPGNALAQDLIF*RVHVHP
Trigger: TGGATGAACATGGACACGCAAGAATATCAGATCTTG...AGCTAAAGCATTACCAGGCCATCTCCAAAACACCCCGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTAGCCGCTGGGCCTCCTaGAAGGTTTCGTTCAACTCT +
Preference number: 5 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVSRWAS*KVSFNS
Trigger: AGAGTTGAACGAAACCTTCAAGGAGGCCCAGCGGCT...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CAA 90 bp CGAATAGATCAGATGCCTCATCCTCGTTCACCCCAAAAGGCTGAGACCCTGGTGTTCCCCTATATGTGTTaGATGAAATGCGTATACTCT +
Preference number: 5 (lower is better)
Translates to: RIDQMPHPRSPQKAETLVFPYMC*MKCVYS
Trigger: AGAGTATACGCATTTCATCAAACACATATAGGGGAA...CACCAGGGTCTCAGCCTTTTGGGGTGAACGAGGATGAGGCATCTGATCTATTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp CTGTGGCTCTCCCATCCCCCAGCAGTATGGAGCAAAGACATAGAAAATCAGCAGAGTAGCTTAATCCCTTaGGTATCCTCTTCATCAAAT +
Preference number: 5 (lower is better)
Translates to: LWLSHPPAVWSKDIENQQSSLIP*VSSSSN
Trigger: ATTTGATGAAGAGGATACCAAAGGGATTAAGCTACT...CTGCTGATTTTCTATGTCTTTGCTCCATACTGCTGGGGGATGGGAGAGCCACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CAA 90 bp TCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTACCCAAGTCTTTGGTTTTATGTaGTCTGAAAGGGCTGTGACC +
Preference number: 5 (lower is better)
Translates to: SAVTRQNMWQCLGQSVTQVFGFM*SERAVT
Trigger: GGTCACAGCCCTTTCAGACAACATAAAACCAAAGAC...TTGGGTAACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACAAGGCATCAGCAGCATaGACTTCTCCCCGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: FNKGNLKFGSLRFSISANKASAA*TSPRGG
Trigger: TCCTCCCCGGGGAGAAGTCAATGCTGCTGATGCCTT...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACCCTGACCGAGGTTTGTaGAGGAACTTCGGGGCACGA +
Preference number: 5 (lower is better)
Translates to: FNKGNLKFGSLRFSISANPDRGL*RNFGAR
Trigger: TCGTGCCCCGAAGTTCCTCAACAAACCTCGGTCAGG...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp CAGGACTTCAGTGGATTTGTAACAGTGTCCCCAACTGACCAATGGGGCAATGCAAAATCAAGCTACATCTaGTTTGCAACAAACAGACCA +
Preference number: 5 (lower is better)
Translates to: QDFSGFVTVSPTDQWGNAKSSYI*FATNRP
Trigger: TGGTCTGTTTGTTGCAAACAAGATGTAGCTTGATTT...TGCATTGCCCCATTGGTCAGTTGGGGACACTGTTACAAATCCACTGAAGTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp CCTGCAACCATAAACTTCCCCGAATCCTCCTCGTCCAATAATCCTATGCACACTAGGGAGGAATGTTATTaGTGGCGTTGTTTTGAAACA +
Preference number: 5 (lower is better)
Translates to: PATINFPESSSSNNPMHTREECY*WRCFET
Trigger: TGTTTCAAAACAACGCCACAAATAACATTCCTCCCT...AGTGTGCATAGGATTATTGGACGAGGAGGATTCGGGGAAGTTTATGGTTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455558.2
CDS TCA 90 bp CGCATGAGGCTTCTTTTTGGAAAAATCGCAGGCAAGACCAAGATCTaGTATTCTTGCGTGTCCATGTTCATCCAAGAGAATATTTGCTGG +
Preference number: 5 (lower is better)
Translates to: RMRLLFGKIAGKTKI*YSCVSMFIQENICW
Trigger: CCAGCAAATATTCTCTTGGATGAACATGGACACGCAAGAATATCAGATCTTGGTCTTGCCTGCGATTTTTCCAAAAAGAAGCCTCATGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS-3UTR CAA 90 bp GACTTTGTACGTGTTCTACAGCTTGCTTTGAGAAAGGATGTGAACAGGAAAGAAGTTCTACAGCTTGCTTaGAGAAAGGATGTGAACAGG +
Preference number: 5 (lower is better)
Translates to: DFVRVLQLALRKDVNRKEVLQLA*RKDVNR
Trigger: CCTGTTCACATCCTTTCTCAAAGCAAGCTGTAGAAC...TTCTTTCCTGTTCACATCCTTTCTCAAAGCAAGCTGTAGAACACGTACAAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455558.2
CDS-3UTR CAA 90 bp ATAAACTGTTTCCGTTACTTCTTGCTGCCAGCGTTCAGAGATGACCAAAGGGAAAGTAGCTTAATCCCTTaGGTATCCTCTTCATCAAAT +
Preference number: 5 (lower is better)
Translates to: INCFRYFLLPAFRDDQRESSLIP*VSSSSN
Trigger: ATTTGATGAAGAGGATACCAAAGGGATTAAGCTACT...TTCCCTTTGGTCATCTCTGAACGCTGGCAGCAAGAAGTAACGGAAACAGTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR CAA 90 bp GCACAAACTCTGGATCACTCTCACATTGCAAGACAAATTGTTTCCCTCCTTTTAAGGACAAGAAGTCAGTaGCGAAGTGCACAAAAGAAA +
Preference number: 5 (lower is better)
Translates to: AQTLDHSHIARQIVSLLLRTRSQ*RSAQKK
Trigger: TTTCTTTTGTGCACTTCGCAACTGACTTCTTGTCCT...TAAAAGGAGGGAAACAATTTGTCTTGCAATGTGAGAGTGATCCAGAGTTTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619906.4
CDS-3UTR CAA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTGTAAAATGTGTTGAATaGGCCCAGCTACAAATTCCG +
Preference number: 5 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVVKCVE*AQLQIP
Trigger: CGGAATTTGTAGCTGGGCCAATTCAACACATTTTAC...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTGAGATGATTCTGAGATaGTTAGATACTGGAGCGCTA +
Preference number: 5 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVEMILR*LDTGAL
Trigger: TAGCGCTCCAGTATCTAACAATCTCAGAATCATCTC...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp AGAAAATCAGCAGTGACTAGACAGAATATGTGGCAATGCTTAGGGCAATCTGTTGAAGATCAACTGTTGTaGAAAACAGTCCATGGTGGT +
Preference number: 5 (lower is better)
Translates to: RKSAVTRQNMWQCLGQSVEDQLL*KTVHGG
Trigger: ACCACCATGGACTGTTTTCAACAACAGTTGATCTTC...AACAGATTGCCCTAAGCATTGCCACATATTCTGTCTAGTCACTGCTGATTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp GACTTTGTACGTGTTCTACAGCTTGCTTTGAGAAAGGATGTGAACAGGAAAGAAATTTGTGGCGTTGTTTaGAAACATCCTGTGCTGACA +
Preference number: 5 (lower is better)
Translates to: DFVRVLQLALRKDVNRKEICGVV*KHPVLT
Trigger: TGTCAGCACAGGATGTTTCAAAACAACGCCACAAAT...TTCTTTCCTGTTCACATCCTTTCTCAAAGCAAGCTGTAGAACACGTACAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455558.2
CDS-3UTR CAA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACTGTTTCCGTTACTTCTaGCTGCCAGCGTTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: FNKGNLKFGSLRFSISANCFRYF*LPAFRD
Trigger: ATCTCTGAACGCTGGCAGCAAGAAGTAACGGAAACA...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACTGCCAGTCAACACCTTaGAAAAAGCTGTGCTCTTTT +
Preference number: 5 (lower is better)
Translates to: FNKGNLKFGSLRFSISANCQSTP*KKLCSF
Trigger: AAAAGAGCACAGCTTTTTCAAAGGTGTTGACTGGCA...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS-3UTR CAA 90 bp TTTAATAAAGGCAATTTAAAATTTGGGAGCCTGCGTTTCTCAATCAGTGCTAACGTTTCTAAGCACAGCTaGCCTTTTTCAAAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: FNKGNLKFGSLRFSISANVSKHS*PFSKSE
Trigger: TTCACTCTTTGAAAAAGGCAAGCTGTGCTTAGAAAC...GTTAGCACTGATTGAGAAACGCAGGCTCCCAAATTTTAAATTGCCTTTATTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324198.11
CDS TCA 72 bp AAACCGCATCTCCTTCTCAGAGAACACACCGTGTTGTaGAAGGTGGTAGTGCAAATCGCCCCCGTTCATCAG +
Preference number: 6 (lower is better)
Translates to: KPHLLLREHTVL*KVVVQIAPVHQ
Trigger: CTGATGAACGGGGGCGATTTGCACTACCACCTTTCACAACACGGTGTGTTCTCTGAGAAGGAGATGCGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS CCA 72 bp ACCCATGGGTGCCAACACTCGCATGAGGCTTCTTTTTaGAAAAATCGCAGGCAAGACCAAGATCTGATATTC +
Preference number: 6 (lower is better)
Translates to: THGCQHSHEASF*KNRRQDQDLIF
Trigger: GAATATCAGATCTTGGTCTTGCCTGCGATTTTTCCAAAAAGAAGCCTCATGCGAGTGTTGGCACCCATGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS CAA 72 bp TGGAAAAATCGCAGGCAAGACCAAGATCTGATATTCTaGCGTGTCCATGTTCATCCAAGAGAATATTTGCTG +
Preference number: 6 (lower is better)
Translates to: WKNRRQDQDLIF*RVHVHPREYLL
Trigger: CAGCAAATATTCTCTTGGATGAACATGGACACGCAAGAATATCAGATCTTGGTCTTGCCTGCGATTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS CAA 90 bp GCTTCTTTTTGGAAAAATCGCAGGCAAGACCAAGATCTGATATTCTaGCGTGTCCATGTTCATCCAAGAGAATATTTGCTGGCTTCAAAT +
Preference number: 6 (lower is better)
Translates to: ASFWKNRRQDQDLIF*RVHVHPREYLLASN
Trigger: ATTTGAAGCCAGCAAATATTCTCTTGGATGAACATGGACACGCAAGAATATCAGATCTTGGTCTTGCCTGCGATTTTTCCAAAAAGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4
CDS TCA 72 bp CTTCTTTTTGGAAAAATCGCAGGCAAGACCAAGATCTaGTATTCTTGCGTGTCCATGTTCATCCAAGAGAAT +
Preference number: 6 (lower is better)
Translates to: LLFGKIAGKTKI*YSCVSMFIQEN
Trigger: ATTCTCTTGGATGAACATGGACACGCAAGAATATCAGATCTTGGTCTTGCCTGCGATTTTTCCAAAAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324198.11
ENST00000619906.4