RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000185974

Ensembl transcript IDs: ENST00000335678.7, ENST00000545304.1, ENST00000606140.1, ENST00000631997.1, ENST00000633083.1, ENST00000633694.1, ENST00000672546.1, ENST00000672946.1, ENST00000672964.1

Found 641 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGACCATGGTGCCCCAGTGTGCAGAGGACCACGGCGCCGCAGGGTaGAGGGGACCATGTGGCGTGCAGGCCACCAGCACAGGGCCCGGG +
Preference number: 1 (lower is better)
Translates to: GTMVPQCAEDHGAAG*RGPCGVQATSTGPG
Trigger: CCCGGGCCCTGTGCTGGTGGCCTGCACGCCACATGGTCCCCTGCACCCTGCGGCGCCGTGGTCCTCTGCACACTGGGGCACCATGGTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 90 bp CCCTGCGGCTTGGATGCACTCCCTCTGAGCCGGCTGCTGAGGCCATaGAACCCAGGCCAGCACCGCCGGCCCTCAAGAGGGAGTGTGTCC +
Preference number: 1 (lower is better)
Translates to: PCGLDALPLSRLLRP*NPGQHRRPSRGSVS
Trigger: GGACACACTCCCTCTTGAGGGCCGGCGGTGCTGGCCTGGGTTCCATGGCCTCAGCAGCCGGCTCAGAGGGAGTGCATCCAAGCCGCAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 90 bp GGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATaGCGTGATGGGGACCTGGGTGGAGGGAACCACGTGTCCCCTTGC +
Preference number: 1 (lower is better)
Translates to: GSGRCGLSPPWAARR*RDGDLGGGNHVSPC
Trigger: GCAAGGGGACACGTGGTTCCCTCCACCCAGGTCCCCATCACGCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 90 bp ACGGACCAGCCCCAGTGGGGAGGAGGGTCAGAGAGCAAACGGTCCTaGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGG +
Preference number: 1 (lower is better)
Translates to: TDQPQWGGGSESKRS*LCPPRAAEVLPGLR
Trigger: CCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCGTTTGCTCTCTGACCCTCCTCCCCACTGGGGCTGGTCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 90 bp CGTGGCCTGAAGTGTCCCCTGGGAGATGAGACGGACCAGCCCCAGTaGGGAGGAGGGTCAGAGAGCAAACGGTCCTGGCTTTGCCCGCCA +
Preference number: 1 (lower is better)
Translates to: RGLKCPLGDETDQPQ*GGGSESKRSWLCPP
Trigger: TGGCGGGCAAAGCCAGGACCGTTTGCTCTCTGACCCTCCTCCCCACTGGGGCTGGTCCGTCTCATCTCCCAGGGGACACTTCAGGCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR GCA 90 bp CAGCCCCAGTGGGGAGGAGGGTCAGAGAGCAAACGGTCCTGGCTTTaGCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCAAG +
Preference number: 1 (lower is better)
Translates to: QPQWGGGSESKRSWL*PPRAAEVLPGLRVK
Trigger: CTTGACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCGTTTGCTCTCTGACCCTCCTCCCCACTGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 90 bp GCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATaGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACC +
Preference number: 1 (lower is better)
Translates to: ATVHLPLRSVALGSQ*LRSWEAKTESLPLT
Trigger: GGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR TCA 90 bp AGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCGTaGTGGGGACCTGGGTGGAGGGAACCACGTGTCCCCTTGCTAGCA +
Preference number: 1 (lower is better)
Translates to: RPMWAFSSLGRKEMA*WGPGWREPRVPLLA
Trigger: TGCTAGCAAGGGGACACGTGGTTCCCTCCACCCAGGTCCCCATCACGCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 90 bp CTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGCTAAGGTCTTaGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGTTGGTC +
Preference number: 1 (lower is better)
Translates to: LPLRSVALGSQWLRS*EAKTESLPLTTRLV
Trigger: GACCAACCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR GCA 90 bp ACGACCTGGCAGCCTGAGGACTGTGAGGGCATAGGCCCTGCCCACTaGAGCACTGACTCTCAGGCAGCTGTCTCTGCCATTTCTGGGAGA +
Preference number: 1 (lower is better)
Translates to: TTWQPEDCEGIGPAH*STDSQAAVSAISGR
Trigger: TCTCCCAGAAATGGCAGAGACAGCTGCCTGAGAGTCAGTGCTGCAGTGGGCAGGGCCTATGCCCTCACAGTCCTCAGGCTGCCAGGTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 90 bp GTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGCTACTaGGAACACAGAGAGGGGTTGCAGCAAGGAGCTCTGTCCCTATGC +
Preference number: 1 (lower is better)
Translates to: VSSRAMALGLQCCCY*EHREGLQQGALSLC
Trigger: GCATAGGGACAGAGCTCCTTGCTGCAACCCCTCTCTGTGTTCCCAGTAGCAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 90 bp GAAATGCCAGGTGCATTGTGGGTGGGGCCGAGCTGTATGAGAAGGTaGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTG +
Preference number: 1 (lower is better)
Translates to: EMPGALWVGPSCMRR*AVSVFPGYGFRTPV
Trigger: CACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCACCCACAATGCACCTGGCATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR GCA 90 bp GCATCTTATGTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATaGAGTCGGGGGCTCACGGCACCAGCATGTGCGTCTGGCGGCTCA +
Preference number: 1 (lower is better)
Translates to: ASYVFSVRWSKRREI*SRGLTAPACASGGS
Trigger: TGAGCCGCCAGACGCACATGCTGGTGCCGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGACATAAGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 90 bp ACCACATGTGGCAGGGTCAGGCTTCTTCTCCCACTGGTACAACAGTaGCCGGGGCTCAAAGGAAGTTCTTTCCTAAAAGGAGCTCAGAGG +
Preference number: 1 (lower is better)
Translates to: TTCGRVRLLLPLVQQ*PGLKGSSFLKGAQR
Trigger: CCTCTGAGCTCCTTTTAGGAAAGAACTTCCTTTGAGCCCCGGCCACTGTTGTACCAGTGGGAGAAGAAGCCTGACCCTGCCACATGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR TCA 90 bp CTGGAGAGCATCTTATGTCTTCTCAGTGAGATGGAGCAAAAGACGTaGAATATGCAGTCGGGGGCTCACGGCACCAGCATGTGCGTCTGG +
Preference number: 1 (lower is better)
Translates to: LESILCLLSEMEQKT*NMQSGAHGTSMCVW
Trigger: CCAGACGCACATGCTGGTGCCGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGACATAAGATGCTCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR GCA 90 bp ATTTGGGGAACCTTCAGTGTTCAAAGTGCAGTTGGAAATGCCAGGTaGATTGTGGGTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAG +
Preference number: 1 (lower is better)
Translates to: IWGTFSVQSAVGNAR*IVGGAELYEKVGCE
Trigger: CTCACAGCCCACCTTCTCATACAGCTCGGCCCCACCCACAATGCACCTGGCATTTCCAACTGCACTTTGAACACTGAAGGTTCCCCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 90 bp GAACCTTCAGTGTTCAAAGTGCAGTTGGAAATGCCAGGTGCATTGTaGGTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTC +
Preference number: 1 (lower is better)
Translates to: EPSVFKVQLEMPGAL*VGPSCMRRWAVSVF
Trigger: GAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCACCCACAATGCACCTGGCATTTCCAACTGCACTTTGAACACTGAAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 90 bp TTGGCTTACTCCCTCTGGAGAGCATCTTATGTCTTCTCAGTGAGATaGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGGCACCA +
Preference number: 1 (lower is better)
Translates to: LAYSLWRASYVFSVR*SKRREICSRGLTAP
Trigger: TGGTGCCGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGACATAAGATGCTCTCCAGAGGGAGTAAGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR TCA 90 bp ATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATaGGGCAACTTGACAGGACATATGAAAGTCTCCACAAAACCAGAC +
Preference number: 1 (lower is better)
Translates to: ILQSRFASQEQSAGA*GNLTGHMKVSTKPD
Trigger: GTCTGGTTTTGTGGAGACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR CCA 90 bp GCAGGAGGCTCCCTAAGAGTTTGTAGATTTTTGGCTTACTCCCTCTaGAGAGCATCTTATGTCTTCTCAGTGAGATGGAGCAAAAGACGT +
Preference number: 1 (lower is better)
Translates to: AGGSLRVCRFLAYSL*RASYVFSVRWSKRR
Trigger: ACGTCTTTTGCTCCATCTCACTGAGAAGACATAAGATGCTCTCCAGAGGGAGTAAGCCAAAAATCTACAAACTCTTAGGGAGCCTCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR GCA 90 bp GTTTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTaGATGAGGCAACTTGACAGGACATATGAAAGTCTCCACAAAACC +
Preference number: 1 (lower is better)
Translates to: VYFAVQVCFPRTVCR*MRQLDRTYESLHKT
Trigger: GGTTTTGTGGAGACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR-3UTR CCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCTCCAGCCCTCCCCAGTaGGGCCAGGGGCTGCGGCCA +
Preference number: 2 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVSSPPQ*GQGLRP
Trigger: TGGCCGCAGCCCCTGGCCCCACTGGGGAGGGCTGGA...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp AGTCGGGGGCTCACGGCACCAGCATGTGCGTCTGGCGGCTCAGGCCGATGTGGGCGCAAGGAGATGGCGTaGTGGGGACCTGGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: SRGLTAPACASGGSGRCGRKEMA*WGPGWR
Trigger: CCTCCACCCAGGTCCCCATCACGCCATCTCCTTGCG...CCCACATCGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTGAGCCCCCGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGCGCAAGGAGATGGCGTaGTGGGGACCTGGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: DLATVHLPLRSVALGSQWRKEMA*WGPGWR
Trigger: CCTCCACCCAGGTCCCCATCACGCCATCTCCTTGCG...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCTCCAGCCCTCCCCAGTaGGGCCAGGGGCTGCGGCCA +
Preference number: 2 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGSSPPQ*GQGLRP
Trigger: TGGCCGCAGCCCCTGGCCCCACTGGGGAGGGCTGGA...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCGCGGCCAGGGTTCACTaGCCCCTGACCTGGCCACCG +
Preference number: 2 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGAARVH*PLTWPP
Trigger: CGGTGGCCAGGTCAGGGGTCAGTGAACCCTGGCCGC...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCCACGGCGCCGCAGGGTaGAGGGGACCATGTGGCGTG +
Preference number: 2 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTHGAAG*RGPCGV
Trigger: CACGCCACATGGTCCCCTGCACCCTGCGGCGCCGTG...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGCGGCTCAGGCCGATGTaGGCTTTCTCCTCCTTGGGC +
Preference number: 2 (lower is better)
Translates to: DLATVHLPLRSVALGSQWRLRPM*AFSSLG
Trigger: GCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCG...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGACCAGCATGTGCGTCTaGCGGCTCAGGCCGATGTGG +
Preference number: 2 (lower is better)
Translates to: DLATVHLPLRSVALGSQWTSMCV*RLRPMW
Trigger: CCACATCGGCCTGAGCCGCCAGACGCACATGCTGGT...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCGTGCAGGGGACCATGTaGCGTGCAGGCCACCAGCAC +
Preference number: 2 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVVQGTM*RAGHQH
Trigger: GTGCTGGTGGCCTGCACGCCACATGGTCCCCTGCAC...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCGGGGACCATGTGGCGTaGAGGCCACCAGCACAGGGC +
Preference number: 2 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGGDHVA*RPPAQG
Trigger: GCCCTGTGCTGGTGGCCTGCACGCCACATGGTCCCC...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCGGGTTCACTGACCCCTaGCCTGGCCACCGTGCACCT +
Preference number: 2 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTGFTDP*PGHRAP
Trigger: AGGTGCACGGTGGCCAGGTCAGGGGTCAGTGAACCC...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCGTGTCCCCTGGGAGATaGGACGGACCAGCCCCAGTG +
Preference number: 2 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGVSPGR*DGPAPV
Trigger: CACTGGGGCTGGTCCGTCTCATCTCCCAGGGGACAC...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGAAGTGGGGCCAGGGGCTaGGGCCAGGGTTCACTGACC +
Preference number: 2 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGSGARG*GQGSLT
Trigger: GGTCAGTGAACCCTGGCCGCAGCCCCTGGCCCCACT...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACTCCAGCCCTCCCCAGTaGGGCCAGGGGCTGCGGCCA +
Preference number: 2 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDSSPPQ*GQGLRP
Trigger: TGGCCGCAGCCCCTGGCCCCACTGGGGAGGGCTGGA...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCGTGCAGGGGACCATGTaGCGTGCAGGCCACCAGCAC +
Preference number: 2 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGVQGTM*RAGHQH
Trigger: GTGCTGGTGGCCTGCACGCCACATGGTCCCCTGCAC...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCACGGACCAGCCCCAGTaGGGAGGAGGGTCAGAGAGC +
Preference number: 2 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGTDQPQ*GGGSES
Trigger: GCTCTCTGACCCTCCTCCCCACTGGGGCTGGTCCGT...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGAGGGTTCACTGACCCCTaGCCTGGCCACCGTGCACCT +
Preference number: 2 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGGFTDP*PGHRAP
Trigger: AGGTGCACGGTGGCCAGGTCAGGGGTCAGTGAACCC...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACGGCACCAGCATGTaGGTCTGGCGGCTCAGGCCG +
Preference number: 2 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDHGTSM*VWRLRP
Trigger: CGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTG...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGCACGGCACCAGCATGTaGGTCTGGCGGCTCAGGCCG +
Preference number: 2 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRHGTSM*VWRLRP
Trigger: CGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTG...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGGGGGACCATGTGGCGTaGAGGCCACCAGCACAGGGC +
Preference number: 2 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLGDHVA*RPPAQG
Trigger: GCCCTGTGCTGGTGGCCTGCACGCCACATGGTCCCC...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGCATGGTGCCCCAGTGTaGAGAGGACCACGGCGCCGC +
Preference number: 2 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLHGAPV*RGPRRR
Trigger: GCGGCGCCGTGGTCCTCTGCACACTGGGGCACCATG...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCCCCCATCGAGCCGTATaGGTCCTTTTCCTCCACGTG +
Preference number: 2 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGPHRAV*VLFLHV
Trigger: CACGTGGAGGAAAAGGACCCATACGGCTCGATGGGG...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCGGCGTGATGGGGACCTaGGTGGAGGGAACCACGTGT +
Preference number: 2 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGGVMGT*VEGTTC
Trigger: ACACGTGGTTCCCTCCACCCAGGTCCCCATCACGCC...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTGGGCCGCAAGGAGATaGCGTGATGGGGACCTGGGT +
Preference number: 2 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGWAARR*RDGDLG
Trigger: ACCCAGGTCCCCATCACGCCATCTCCTTGCGGCCCA...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCCGGCTCAGGCCGATGTaGGCTTTCTCCTCCTTGGGC +
Preference number: 2 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGRLRPM*AFSSLG
Trigger: GCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCG...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CAA 90 bp CCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGCTAAGGTCTaGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGTTGGT +
Preference number: 2 (lower is better)
Translates to: PPAEERGSGKPMAKV*GGQNRVSAPDHTVG
Trigger: ACCAACCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATCCGTGCACCTCCCGCTaGGGAGCGTGGCTCTGGGAA +
Preference number: 2 (lower is better)
Translates to: PVSISHIISHLPRPLSPNPCTSR*GAWLWE
Trigger: TTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGG...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGCATGGTGCCCCAGTGTaGAGAGGACCACGGCGCCGC +
Preference number: 2 (lower is better)
Translates to: PGAWPIFPPEALKPHRREHGAPV*RGPRRR
Trigger: GCGGCGCCGTGGTCCTCTGCACACTGGGGCACCATG...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCTTCTACCACCAGCTCTaGCCCAAGGCTCACGGGGAC +
Preference number: 2 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGFYHQL*PKAHGD
Trigger: GTCCCCGTGAGCCTTGGGGCAGAGCTGGTGGTAGAA...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCTTCTACCACCAGCTCTaGCCCAAGGCTCACGGGGAC +
Preference number: 2 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTFYHQL*PKAHGD
Trigger: GTCCCCGTGAGCCTTGGGGCAGAGCTGGTGGTAGAA...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGAGGCGTGATGGGGACCTaGGTGGAGGGAACCACGTGT +
Preference number: 2 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGGVMGT*VEGTTC
Trigger: ACACGTGGTTCCCTCCACCCAGGTCCCCATCACGCC...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGATGGGCCGCAAGGAGATaGCGTGATGGGGACCTGGGT +
Preference number: 2 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGWAARR*RDGDLG
Trigger: ACCCAGGTCCCCATCACGCCATCTCCTTGCGGCCCA...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCTATGCACAAGGCCCGTaGCCTGAAGTGTCCCCTGGG +
Preference number: 2 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTYAQGP*PEVSPG
Trigger: CCCAGGGGACACTTCAGGCCACGGGCCTTGTGCATA...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCGGCTTCTTCTCCCACTaGTACAACAGTGGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGGFFSH*YNSGRG
Trigger: GCCCCGGCCACTGTTGTACCAGTGGGAGAAGAAGCC...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGGGGTTCACTGACCCCTaGCCTGGCCACCGTGCACCT +
Preference number: 2 (lower is better)
Translates to: PGAWPIFPPEALKPHRREGFTDP*PGHRAP
Trigger: AGGTGCACGGTGGCCAGGTCAGGGGTCAGTGAACCC...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGCCCGCCAAGAGCAGCTaGGGTGCTTCCGGGACTCAG +
Preference number: 2 (lower is better)
Translates to: PGAWPIFPPEALKPHRREPAKSS*GASGTQ
Trigger: CTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGG...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCGTTGGAAATGCCAGGTaGATTGTGGGTGGGGCCGAG +
Preference number: 2 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGVGNAR*IVGGAE
Trigger: CTCGGCCCCACCCACAATGCACCTGGCATTTCCAAC...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCATAGGCCCTGCCCACTaGAGCACTGACTCTCAGGCA +
Preference number: 2 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGIGPAH*STDSQA
Trigger: TGCCTGAGAGTCAGTGCTGCAGTGGGCAGGGCCTAT...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCCCCCATCGAGCCGTATaGGTCCTTTTCCTCCACGTG +
Preference number: 2 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTPHRAV*VLFLHV
Trigger: CACGTGGAGGAAAAGGACCCATACGGCTCGATGGGG...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACTGGGCCGCAAGGAGATaGCGTGATGGGGACCTGGGT +
Preference number: 2 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDWAARR*RDGDLG
Trigger: ACCCAGGTCCCCATCACGCCATCTCCTTGCGGCCCA...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCGGCTCAGGCCGATGTaGGCTTTCTCCTCCTTGGGC +
Preference number: 2 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDRLRPM*AFSSLG
Trigger: GCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCG...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGACCAGCATGTGCGTCTaGCGGCTCAGGCCGATGTGG +
Preference number: 2 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLTSMCV*RLRPMW
Trigger: CCACATCGGCCTGAGCCGCCAGACGCACATGCTGGT...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCGCTCTGGGAAGCCAATaGCTAAGGTCTTGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGALGSQ*LRSWEA
Trigger: GGCCTCCCAAGACCTTAGCCATTGGCTTCCCAGAGC...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCGCTCTGGGAAGCCAATaGCTAAGGTCTTGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTALGSQ*LRSWEA
Trigger: GGCCTCCCAAGACCTTAGCCATTGGCTTCCCAGAGC...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGGAGTGCAGGGGACCATaGTGCCCCAGTGTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLECRGP*CPSVQR
Trigger: CCTCTGCACACTGGGGCACCATGGTCCCCTGCACTC...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCGAGAGCAAACGGTCCTaGCTTTGCCCGCCAAGAGCA +
Preference number: 2 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTESKRS*LCPPRA
Trigger: TGCTCTTGGCGGGCAAAGCCAGGACCGTTTGCTCTC...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAACGGACCAGCCCCAGTaGGGAGGAGGGTCAGAGAGC +
Preference number: 2 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTTDQPQ*GGGSES
Trigger: GCTCTCTGACCCTCCTCCCCACTGGGGCTGGTCCGT...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCCCCCGTGACCACATGTaGCAGGGTCAGGCTTCTTCT +
Preference number: 2 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGPRDHM*QGQASS
Trigger: AGAAGAAGCCTGACCCTGCCACATGTGGTCACGGGG...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCATGGAGCAAAAGACGTaGAATATGCAGTCGGGGGCT +
Preference number: 2 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVMEQKT*NMQSGA
Trigger: AGCCCCCGACTGCATATTTCACGTCTTTTGCTCCAT...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGCCGAGTCTCTGCCCCTaGCCACACGGTTGGTCAATC +
Preference number: 2 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLPSLCP*PHGWSI
Trigger: GATTGACCAACCGTGTGGTCAGGGGCAGAGACTCGG...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCGGACTCCAGTGCTGCTaGTACTGGGAACACAGAGAG +
Preference number: 2 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTGLQCC*YWEHRE
Trigger: CTCTCTGTGTTCCCAGTAGCAGCAGCACTGGAGTCC...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGTCCCTGCGGCTTGGATaGACTCCCTCTGAGCCGGCT +
Preference number: 2 (lower is better)
Translates to: PGAWPIFPPEALKPHRRESLRLG*TPSEPA
Trigger: AGCCGGCTCAGAGGGAGTGCATCCAAGCCGCAGGGA...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGACCCCATCGAGCCGTATaGGTCCTTTTCCTCCACGTG +
Preference number: 2 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGPHRAV*VLFLHV
Trigger: CACGTGGAGGAAAAGGACCCATACGGCTCGATGGGG...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAACCAGCATGTGCGTCTaGCGGCTCAGGCCGATGTGG +
Preference number: 2 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTTSMCV*RLRPMW
Trigger: CCACATCGGCCTGAGCCGCCAGACGCACATGCTGGT...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCTGTCTCTGCCATTTCTaGGAGAGAGGCCGAGACCCA +
Preference number: 2 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGCLCHF*ERGRDP
Trigger: TGGGTCTCGGCCTCTCTCCCAGAAATGGCAGAGACA...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGCCGAGTCTCTGCCCCTaGCCACACGGTTGGTCAATC +
Preference number: 2 (lower is better)
Translates to: PGAWPIFPPEALKPHRREPSLCP*PHGWSI
Trigger: GATTGACCAACCGTGTGGTCAGGGGCAGAGACTCGG...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAGACCCCAAGATGCACTaGGACCCCCAGACTCCACAC +
Preference number: 2 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTDPKMH*DPQTPH
Trigger: GTGTGGAGTCTGGGGGTCTCAGTGCATCTTGGGGTC...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGAAACGGTCCTGGCTTTaGCCGCCAAGAGCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLKRSWL*PPRAAE
Trigger: CTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCGTTT...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGTTGGCTTACTCCCTCTaGAGAGCATCTTATGTCTTC +
Preference number: 2 (lower is better)
Translates to: DLATVHLPLRSVALGSQWLAYSL*RASYVF
Trigger: GAAGACATAAGATGCTCTCCAGAGGGAGTAAGCCAA...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGGAGAGCAAACGGTCCTaGCTTTGCCCGCCAAGAGCA +
Preference number: 2 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLESKRS*LCPPRA
Trigger: TGCTCTTGGCGGGCAAAGCCAGGACCGTTTGCTCTC...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATTATGCACAAGGCCCGTaGCCTGAAGTGTCCCCTGGG +
Preference number: 2 (lower is better)
Translates to: PVSISHIISHLPRPLSPNYAQGP*PEVSPG
Trigger: CCCAGGGGACACTTCAGGCCACGGGCCTTGTGCATA...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATGAACTTTGCACCAGCTaGCGTCAGCTGGACACCCTG +
Preference number: 2 (lower is better)
Translates to: PVSISHIISHLPRPLSPNELCTS*RQLDTL
Trigger: CAGGGTGTCCAGCTGACGGCAGCTGGTGCAAAGTTC...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATGTTGGAAATGCCAGGTaGATTGTGGGTGGGGCCGAG +
Preference number: 2 (lower is better)
Translates to: PVSISHIISHLPRPLSPNVGNAR*IVGGAE
Trigger: CTCGGCCCCACCCACAATGCACCTGGCATTTCCAAC...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCAAGTGCAGTTGGAAATaGCAGGTGCATTGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGKCSWK*QVHCGW
Trigger: CCACCCACAATGCACCTGGCATTTCCAACTGCACTT...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCCAATGGCTAAGGTCTTaGGAGGCCAAAACCGAGTCT +
Preference number: 2 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGQWLRS*EAKTES
Trigger: AGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACGCTCTGGGAAGCCAATaGCTAAGGTCTTGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDALGSQ*LRSWEA
Trigger: GGCCTCCCAAGACCTTAGCCATTGGCTTCCCAGAGC...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGATGCCAGGTGCATTGTaGGTGGGGCCGAGCTGTATG +
Preference number: 2 (lower is better)
Translates to: PGAWPIFPPEALKPHRREMPGAL*VGPSCM
Trigger: CATACAGCTCGGCCCCACCCACAATGCACCTGGCAT...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATATGCCAGGTGCATTGTaGGTGGGGCCGAGCTGTATG +
Preference number: 2 (lower is better)
Translates to: PVSISHIISHLPRPLSPNMPGAL*VGPSCM
Trigger: CATACAGCTCGGCCCCACCCACAATGCACCTGGCAT...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAAGGAAGAGGACGACCTaGCAGCCTGAGGACTGTGAG +
Preference number: 2 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTRKRTT*QPEDCE
Trigger: CTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCT...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCACACGGCACCAGCATGTaGGTCTGGCGGCTCAGGCCG +
Preference number: 2 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEAHGTSM*VWRLRP
Trigger: CGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTG...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR-3UTR GCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGAAGGAGACCCCAAGATaGACTGAGACCCCCAGACTC +
Preference number: 2 (lower is better)
Translates to: PGAWPIFPPEALKPHRREKETPR*TETPRL
Trigger: GAGTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTT...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CAA 90 bp GGGGAACCTTCAGTGTTCAAAGTGCAGTTGGAAATGCCAGGTGCATaGTGGGTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTC +
Preference number: 2 (lower is better)
Translates to: GEPSVFKVQLEMPGA*WVGPSCMRRWAVSV
Trigger: GACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCACCCACAATGCACCTGGCATTTCCAACTGCACTTTGAACACTGAAGGTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGATGGAGCAAAAGACGTaGAATATGCAGTCGGGGGCT +
Preference number: 2 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRMEQKT*NMQSGA
Trigger: AGCCCCCGACTGCATATTTCACGTCTTTTGCTCCAT...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCCTTATGTCTTCTCAGTaGGATGGAGCAAAAGACGTG +
Preference number: 2 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGLMSSQ*DGAKDV
Trigger: CACGTCTTTTGCTCCATCTCACTGAGAAGACATAAG...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCAGTGTCCCCTGGGAGATaGGACGGACCAGCCCCAGTG +
Preference number: 2 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEAVSPGR*DGPAPV
Trigger: CACTGGGGCTGGTCCGTCTCATCTCCCAGGGGACAC...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR-3UTR GCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGATTGGTCAATCACCAATaGAGGAGGCTCCCTAAGAGT +
Preference number: 2 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGLVNHQ*RRLPKS
Trigger: ACTCTTAGGGAGCCTCCTGCATTGGTGATTGACCAA...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATGCTTTAGGACTCCAGTaGTGCTGCTACTGGGAACAC +
Preference number: 2 (lower is better)
Translates to: PVSISHIISHLPRPLSPNALGLQ*CCYWEH
Trigger: GTGTTCCCAGTAGCAGCAGCACTGGAGTCCTAAAGC...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCTTGGCTTACTCCCTCTaGAGAGCATCTTATGTCTTC +
Preference number: 2 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTLAYSL*RASYVF
Trigger: GAAGACATAAGATGCTCTCCAGAGGGAGTAAGCCAA...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATAGCTGTATGAGAAGGTaGGCTGTGAGTGTCTTCCCG +
Preference number: 2 (lower is better)
Translates to: PVSISHIISHLPRPLSPNSCMRR*AVSVFP
Trigger: CGGGAAGACACTCACAGCCCACCTTCTCATACAGCT...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTCGCAAGGAGATGGCGTaGTGGGGACCTGGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESRKEMA*WGPGWR
Trigger: CCTCCACCCAGGTCCCCATCACGCCATCTCCTTGCG...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR-3UTR TCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGACTTATGTCTTCTCAGTaGGATGGAGCAAAAGACGTG +
Preference number: 2 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGLMSSQ*DGAKDV
Trigger: CACGTCTTTTGCTCCATCTCACTGAGAAGACATAAG...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACAAGGCCCGTGGCCTaGAGTGTCCCCTGGGAGATG +
Preference number: 2 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEATRPVA*SVPWEM
Trigger: CATCTCCCAGGGGACACTTCAGGCCACGGGCCTTGT...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR-3UTR GCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGAAAAGACGTGAAATATaGAGTCGGGGGCTCACGGCA +
Preference number: 2 (lower is better)
Translates to: PGAWPIFPPEALKPHRREKRREI*SRGLTA
Trigger: TGCCGTGAGCCCCCGACTGCATATTTCACGTCTTTT...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACAAAAGACGTGAAATATaGAGTCGGGGGCTCACGGCA +
Preference number: 2 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDKRREI*SRGLTA
Trigger: TGCCGTGAGCCCCCGACTGCATATTTCACGTCTTTT...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCTGTTCAAAGTGCAGTTaGAAATGCCAGGTGCATTGT +
Preference number: 2 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTCSKCS*KCQVHC
Trigger: ACAATGCACCTGGCATTTCCAACTGCACTTTGAACA...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTACAAGGCCCGTGGCCTaGAGTGTCCCCTGGGAGATG +
Preference number: 2 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESTRPVA*SVPWEM
Trigger: CATCTCCCAGGGGACACTTCAGGCCACGGGCCTTGT...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR-3UTR GCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCACAGGGGTGGGAACTTTaGACCAGCTGCCGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEAQGWEL*TSCRQL
Trigger: CAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTG...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR-3UTR GCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGTGTCCTGGAGGCAGTTaGAACAGAACTAACTTCCTG +
Preference number: 2 (lower is better)
Translates to: PGAWPIFPPEALKPHRRECPGGS*NRTNFL
Trigger: CAGGAAGTTAGTTCTGTTGCAACTGCCTCCAGGACA...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCGTCTTCTCAGTGAGATaGAGCAAAAGACGTGAAATA +
Preference number: 2 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGVFSVR*SKRREI
Trigger: TATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGTTGGCTTACTCCCTCTaGAGAGCATCTTATGTCTTC +
Preference number: 2 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLLAYSL*RASYVF
Trigger: GAAGACATAAGATGCTCTCCAGAGGGAGTAAGCCAA...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR TCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCACATCTTCTCTCCCCGTaGCCACATGTGGCAGGGTCA +
Preference number: 2 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEAHLLSP*PHVAGS
Trigger: TGACCCTGCCACATGTGGTCACGGGGAGAGAAGATG...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR-3UTR TCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTTGCCCACTGCAGCACTaGCTCTCAGGCAGCTGTCTC +
Preference number: 2 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESCPLQH*LSGSCL
Trigger: GAGACAGCTGCCTGAGAGTCAGTGCTGCAGTGGGCA...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR-3UTR GCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGCTTCAGTGTTCAAAGTaGAGTTGGAAATGCCAGGTG +
Preference number: 2 (lower is better)
Translates to: PGAWPIFPPEALKPHRRELQCSK*SWKCQV
Trigger: CACCTGGCATTTCCAACTGCACTTTGAACACTGAAG...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACATCATCAGCCACTTaGCGCGGCCCCTCTCACCAA +
Preference number: 2 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEATSSAT*RGPSHQ
Trigger: TTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGT...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR-3UTR GCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTCAAGAGCAGCTGAGGTaGTTCCGGGACTCAGGGTCA +
Preference number: 2 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESQEQLR*FRDSGS
Trigger: TGACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTG...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR-3UTR GCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTAAACGGTCCTGGCTTTaGCCGCCAAGAGCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESKRSWL*PPRAAE
Trigger: CTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCGTTT...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR-3UTR GCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTGGACTCCAGTGCTGCTaGTACTGGGAACACAGAGAG +
Preference number: 2 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESGLQCC*YWEHRE
Trigger: CTCTCTGTGTTCCCAGTAGCAGCAGCACTGGAGTCC...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR-3UTR GCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCATTGGTCAATCACCAATaGAGGAGGCTCCCTAAGAGT +
Preference number: 2 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEALVNHQ*RRLPKS
Trigger: ACTCTTAGGGAGCCTCCTGCATTGGTGATTGACCAA...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR CAA 90 bp TGGTCAATCACCAATGCAGGAGGCTCCCTAAGAGTTTGTAGATTTTaGGCTTACTCCCTCTGGAGAGCATCTTATGTCTTCTCAGTGAGA +
Preference number: 2 (lower is better)
Translates to: WSITNAGGSLRVCRF*AYSLWRASYVFSVR
Trigger: TCTCACTGAGAAGACATAAGATGCTCTCCAGAGGGAGTAAGCCAAAAATCTACAAACTCTTAGGGAGCCTCCTGCATTGGTGATTGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR GCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTCTTCAGTGTTCAAAGTaGAGTTGGAAATGCCAGGTG +
Preference number: 2 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESLQCSK*SWKCQV
Trigger: CACCTGGCATTTCCAACTGCACTTTGAACACTGAAG...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR-3UTR CCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTGTCTTCTCAGTGAGATaGAGCAAAAGACGTGAAATA +
Preference number: 2 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESVFSVR*SKRREI
Trigger: TATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR GCA 72 bp GTGCCCCAGTGTGCAGAGGACCACGGCGCCGCAGGGTaGAGGGGACCATGTGGCGTGCAGGCCACCAGCACA +
Preference number: 3 (lower is better)
Translates to: VPQCAEDHGAAG*RGPCGVQATST
Trigger: TGTGCTGGTGGCCTGCACGCCACATGGTCCCCTGCACCCTGCGGCGCCGTGGTCCTCTGCACACTGGGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CAA 90 bp AGTCGGGGGCTCACGGCACCAGCATGTGCGTCTGGCGGCTCAGGCCGATGTGGGGAACCACGTGTCCCCTaGCTAGCAGACCCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: SRGLTAPACASGGSGRCGEPRVP*LADPRL
Trigger: CAGCCTGGGGTCTGCTAGCAAGGGGACACGTGGTTC...CCCACATCGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTGAGCCCCCGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 72 bp GGCACCAGCATGTGCGTCTGGCGGCTCAGGCCGATGTaGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCG +
Preference number: 3 (lower is better)
Translates to: GTSMCVWRLRPM*AFSSLGRKEMA
Trigger: CGCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAGACGCACATGCTGGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CAA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCGAACCACGTGTCCCCTaGCTAGCAGACCCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVEPRVP*LADPRL
Trigger: CAGCCTGGGGTCTGCTAGCAAGGGGACACGTGGTTC...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 72 bp ATGCAGTCGGGGGCTCACGGCACCAGCATGTGCGTCTaGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: MQSGAHGTSMCV*RLRPMWAFSSL
Trigger: CAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTGAGCCCCCGACTGCAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 72 bp CCCCAGTGGGGAGGAGGGTCAGAGAGCAAACGGTCCTaGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCG +
Preference number: 3 (lower is better)
Translates to: PQWGGGSESKRS*LCPPRAAEVLP
Trigger: CGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCGTTTGCTCTCTGACCCTCCTCCCCACTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CAA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCTCAGGGGTGGGAACTTaGCACCAGCTGCCGTCAGCT +
Preference number: 3 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVSGVGT*HQLPSA
Trigger: AGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGA...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR TCA 72 bp CAAGGAGCTCTGTCCCTATGCACAAGGCCCGTGGCCTaGAGTGTCCCCTGGGAGATGAGACGGACCAGCCCC +
Preference number: 3 (lower is better)
Translates to: QGALSLCTRPVA*SVPWEMRRTSP
Trigger: GGGGCTGGTCCGTCTCATCTCCCAGGGGACACTTCAGGCCACGGGCCTTGTGCATAGGGACAGAGCTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR GCA 72 bp TGGGGAGGAGGGTCAGAGAGCAAACGGTCCTGGCTTTaGCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTC +
Preference number: 3 (lower is better)
Translates to: WGGGSESKRSWL*PPRAAEVLPGL
Trigger: GAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCGTTTGCTCTCTGACCCTCCTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 72 bp CTCCTTGGGCCGCAAGGAGATGGCGTGATGGGGACCTaGGTGGAGGGAACCACGTGTCCCCTTGCTAGCAGA +
Preference number: 3 (lower is better)
Translates to: LLGPQGDGVMGT*VEGTTCPLASR
Trigger: TCTGCTAGCAAGGGGACACGTGGTTCCCTCCACCCAGGTCCCCATCACGCCATCTCCTTGCGGCCCAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 72 bp CGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATaGCGTGATGGGGACCTGGGTGGAGGGAACCACGTG +
Preference number: 3 (lower is better)
Translates to: RCGLSPPWAARR*RDGDLGGGNHV
Trigger: CACGTGGTTCCCTCCACCCAGGTCCCCATCACGCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 72 bp CAGGGTCCTCTTCTCCCCAACAGGAAGAGGACGACCTaGCAGCCTGAGGACTGTGAGGGCATAGGCCCTGCC +
Preference number: 3 (lower is better)
Translates to: QGPLLPNRKRTT*QPEDCEGIGPA
Trigger: GGCAGGGCCTATGCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGGACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CAA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCCCAATGGCTAAGGTCTaGGGAGGCCAAAACCGAGTC +
Preference number: 3 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVPMAKV*GGQNRV
Trigger: GACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGG...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CAA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCGAACACAGAGAGGGGTaGCAGCAAGGAGCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGEHREG*QQGALS
Trigger: GGACAGAGCTCCTTGCTGCAACCCCTCTCTGTGTTC...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CAA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCGAACACAGAGAGGGGTaGCAGCAAGGAGCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTEHREG*QQGALS
Trigger: GGACAGAGCTCCTTGCTGCAACCCCTCTCTGTGTTC...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR GCA 72 bp CAGCCTGAGGACTGTGAGGGCATAGGCCCTGCCCACTaGAGCACTGACTCTCAGGCAGCTGTCTCTGCCATT +
Preference number: 3 (lower is better)
Translates to: QPEDCEGIGPAH*STDSQAAVSAI
Trigger: AATGGCAGAGACAGCTGCCTGAGAGTCAGTGCTGCAGTGGGCAGGGCCTATGCCCTCACAGTCCTCAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 72 bp CACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATaGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTG +
Preference number: 3 (lower is better)
Translates to: HLPLRSVALGSQ*LRSWEAKTESL
Trigger: CAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CAA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGGAACCACGTGTCCCCTaGCTAGCAGACCCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: PGAWPIFPPEALKPHRREEPRVP*LADPRL
Trigger: CAGCCTGGGGTCTGCTAGCAAGGGGACACGTGGTTC...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CAA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCCCAATGGCTAAGGTCTaGGGAGGCCAAAACCGAGTC +
Preference number: 3 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGPMAKV*GGQNRV
Trigger: GACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGG...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CAA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGCTGCTTCCCTGCGGCTaGGATGCACTCCCTCTGAGC +
Preference number: 3 (lower is better)
Translates to: PGAWPIFPPEALKPHRRELLPCG*DALPLS
Trigger: GCTCAGAGGGAGTGCATCCAAGCCGCAGGGAAGCAG...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR TCA 72 bp GGGAACTTTGCACCAGCTGCCGTCAGCTGGACACCCTaGGATAAGGAGACCCCAAGATGCACTGAGACCCCC +
Preference number: 3 (lower is better)
Translates to: GNFAPAAVSWTP*DKETPRCTETP
Trigger: GGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGACGGCAGCTGGTGCAAAGTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 72 bp GGTGCATTGTGGGTGGGGCCGAGCTGTATGAGAAGGTaGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGG +
Preference number: 3 (lower is better)
Translates to: GALWVGPSCMRR*AVSVFPGYGFR
Trigger: CCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCACCCACAATGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CAA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGCCCCTGACCACACGGTaGGTCAATCACCAATGCAGG +
Preference number: 3 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLPLTTR*VNHQCR
Trigger: CCTGCATTGGTGATTGACCAACCGTGTGGTCAGGGG...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CAA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAGAAATGCCAGGTGCATaGTGGGTGGGGCCGAGCTGT +
Preference number: 3 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTEMPGA*WVGPSC
Trigger: ACAGCTCGGCCCCACCCACAATGCACCTGGCATTTC...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CAA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGGAACACAGAGAGGGGTaGCAGCAAGGAGCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: PGAWPIFPPEALKPHRREEHREG*QQGALS
Trigger: GGACAGAGCTCCTTGCTGCAACCCCTCTCTGTGTTC...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR TCA 72 bp GAGCAAACGGTCCTGGCTTTGCCCGCCAAGAGCAGCTaGGGTGCTTCCGGGACTCAGGGTCAAGACAGAAAA +
Preference number: 3 (lower is better)
Translates to: EQTVLALPAKSS*GASGTQGQDRK
Trigger: TTTTCTGTCTTGACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCGTTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 72 bp GGACGTCCTACCATCTTCTCTCCCCGTGACCACATGTaGCAGGGTCAGGCTTCTTCTCCCACTGGTACAACA +
Preference number: 3 (lower is better)
Translates to: GRPTIFSPRDHM*QGQASSPTGTT
Trigger: TGTTGTACCAGTGGGAGAAGAAGCCTGACCCTGCCACATGTGGTCACGGGGAGAGAAGATGGTAGGACGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 72 bp GTGTTCAAAGTGCAGTTGGAAATGCCAGGTGCATTGTaGGTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTG +
Preference number: 3 (lower is better)
Translates to: VFKVQLEMPGAL*VGPSCMRRWAV
Trigger: CACAGCCCACCTTCTCATACAGCTCGGCCCCACCCACAATGCACCTGGCATTTCCAACTGCACTTTGAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CAA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCAGAGTTTGTAGATTTTaGGCTTACTCCCTCTGGAGA +
Preference number: 3 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGRVCRF*AYSLWR
Trigger: TCTCCAGAGGGAGTAAGCCAAAAATCTACAAACTCT...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CAA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCACTGCTTCCCTGCGGCTaGGATGCACTCCCTCTGAGC +
Preference number: 3 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEALLPCG*DALPLS
Trigger: GCTCAGAGGGAGTGCATCCAAGCCGCAGGGAAGCAG...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR-3UTR CAA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCACACATCATCAGCCACTaGCCGCGGCCCCTCTCACCA +
Preference number: 3 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEAHIISH*PRPLSP
Trigger: TGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTG...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR GCA 72 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATaGAGTCGGGGGCTCACGGCACCAGCATGTGCGTCT +
Preference number: 3 (lower is better)
Translates to: VFSVRWSKRREI*SRGLTAPACAS
Trigger: AGACGCACATGCTGGTGCCGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 72 bp GGCAGGGTCAGGCTTCTTCTCCCACTGGTACAACAGTaGCCGGGGCTCAAAGGAAGTTCTTTCCTAAAAGGA +
Preference number: 3 (lower is better)
Translates to: GRVRLLLPLVQQ*PGLKGSSFLKG
Trigger: TCCTTTTAGGAAAGAACTTCCTTTGAGCCCCGGCCACTGTTGTACCAGTGGGAGAAGAAGCCTGACCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CAA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAGTGTTCAAAGTGCAGTaGGAAATGCCAGGTGCATTG +
Preference number: 3 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTVFKVQ*EMPGAL
Trigger: CAATGCACCTGGCATTTCCAACTGCACTTTGAACAC...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR GCA 72 bp ACCTTCAGTGTTCAAAGTGCAGTTGGAAATGCCAGGTaGATTGTGGGTGGGGCCGAGCTGTATGAGAAGGTG +
Preference number: 3 (lower is better)
Translates to: TFSVQSAVGNAR*IVGGAELYEKV
Trigger: CACCTTCTCATACAGCTCGGCCCCACCCACAATGCACCTGGCATTTCCAACTGCACTTTGAACACTGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR GCA 72 bp TTTGGCTGCAGCCAGCAAATCTCCAAAATTGTGGATTaGCAGGGTCCTCTTCTCCCCAACAGGAAGAGGACG +
Preference number: 3 (lower is better)
Translates to: FGCSQQISKIVD*QGPLLPNRKRT
Trigger: CGTCCTCTTCCTGTTGGGGAGAAGAGGACCCTGGCAATCCACAATTTTGGAGATTTGCTGGCTGCAGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CCA 72 bp AAGCATTTGGGGAACCTTCAGTGTTCAAAGTGCAGTTaGAAATGCCAGGTGCATTGTGGGTGGGGCCGAGCT +
Preference number: 3 (lower is better)
Translates to: KHLGNLQCSKCS*KCQVHCGWGRA
Trigger: AGCTCGGCCCCACCCACAATGCACCTGGCATTTCCAACTGCACTTTGAACACTGAAGGTTCCCCAAATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CAA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAAGAGTTTGTAGATTTTaGGCTTACTCCCTCTGGAGA +
Preference number: 3 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTRVCRF*AYSLWR
Trigger: TCTCCAGAGGGAGTAAGCCAAAAATCTACAAACTCT...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR-3UTR CAA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCACTCCAAAATTGTGGATaGCCAGGGTCCTCTTCTCCC +
Preference number: 3 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEALQNCG*PGSSSP
Trigger: GGGAGAAGAGGACCCTGGCAATCCACAATTTTGGAG...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR TCA 72 bp ATCTTATGTCTTCTCAGTGAGATGGAGCAAAAGACGTaGAATATGCAGTCGGGGGCTCACGGCACCAGCATG +
Preference number: 3 (lower is better)
Translates to: ILCLLSEMEQKT*NMQSGAHGTSM
Trigger: CATGCTGGTGCCGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGACATAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR GCA 72 bp GCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTaGATGAGGCAACTTGACAGGACATATGAAAGTCTC +
Preference number: 3 (lower is better)
Translates to: AVQVCFPRTVCR*MRQLDRTYESL
Trigger: GAGACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR CCA 72 bp TCCCTCTGGAGAGCATCTTATGTCTTCTCAGTGAGATaGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTC +
Preference number: 3 (lower is better)
Translates to: SLWRASYVFSVR*SKRREICSRGL
Trigger: GAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGACATAAGATGCTCTCCAGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR TCA 72 bp TCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATaGGGCAACTTGACAGGACATATGAAAGTCTCCACA +
Preference number: 3 (lower is better)
Translates to: SRFASQEQSAGA*GNLTGHMKVST
Trigger: TGTGGAGACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR TCA 72 bp CTTACTCCCTCTGGAGAGCATCTTATGTCTTCTCAGTaGGATGGAGCAAAAGACGTGAAATATGCAGTCGGG +
Preference number: 3 (lower is better)
Translates to: LTPSGEHLMSSQ*DGAKDVKYAVG
Trigger: CCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGACATAAGATGCTCTCCAGAGGGAGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGTGCCCGCTTCAGGCGTaGGGGCCCATCAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: DLATVHLPLRSVALGSQWCPLQA*GPISRG
Trigger: GCCTCGGCTGATGGGCCCTCACGCCTGAAGCGGGCA...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCCACGGCGCCGCAGGGTaGAGGGGACCATGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSHGAAG*RGPCGV
Trigger: CACGCCACATGGTCCCCTGCACCCTGCGGCGCCGTG...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp AGTCGGGGGCTCACGGCACCAGCATGTGCGTCTGGCGGCTCAGGCCGATGTGGGCCGGTCGCCTTCATCTaGCAGGCCGACACCTCCCCG +
Preference number: 4 (lower is better)
Translates to: SRGLTAPACASGGSGRCGPVAFI*QADTSP
Trigger: CGGGGAGGTGTCGGCCTGCCAGATGAAGGCGACCGG...CCCACATCGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTGAGCCCCCGACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCTCCAGCCCTCCCCAGTaGGGCCAGGGGCTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGSSPPQ*GQGLRP
Trigger: TGGCCGCAGCCCCTGGCCCCACTGGGGAGGGCTGGA...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCTGCCCGCTTCAGGCGTaGGGGCCCATCAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVCPLQA*GPISRG
Trigger: GCCTCGGCTGATGGGCCCTCACGCCTGAAGCGGGCA...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGCCGTGCACCTCCCGCTaGGGAGCGTGGCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: DLATVHLPLRSVALGSQWPCTSR*GAWLWE
Trigger: TTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGG...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp AGTCGGGGGCTCACGGCACCAGCATGTGCGTCTGGCGGCTCAGGCCGATGTGGGTCGTACTCCTCGCCCTaGAGGAGCTCGGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: SRGLTAPACASGGSGRCGSYSSP*RSSGAM
Trigger: CATGGCCCCCGAGCTCCTGCAGGGCGAGGAGTACGA...CCCACATCGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTGAGCCCCCGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCCACGGCGCCGCAGGGTaGAGGGGACCATGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGHGAAG*RGPCGV
Trigger: CACGCCACATGGTCCCCTGCACCCTGCGGCGCCGTG...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCCCGTGCACCTCCCGCTaGGGAGCGTGGCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGPCTSR*GAWLWE
Trigger: TTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGG...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGGTGTCCCCTGGGAGATaGGACGGACCAGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: DLATVHLPLRSVALGSQWVSPGR*DGPAPV
Trigger: CACTGGGGCTGGTCCGTCTCATCTCCCAGGGGACAC...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCGGGGACCATGTGGCGTaGAGGCCACCAGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGGDHVA*RPPAQG
Trigger: GCCCTGTGCTGGTGGCCTGCACGCCACATGGTCCCC...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCCGTCCCTGCCCTTGCTaGACGAGAGAGACGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSRPCPC*TRETPW
Trigger: CCAGGGCGTCTCTCTCGTCCAGCAAGGGCAGGGACG...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp AGTCGGGGGCTCACGGCACCAGCATGTGCGTCTGGCGGCTCAGGCCGATGTGGGTGGAAGAGCCCGTCCTaGATCTCCACAGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SRGLTAPACASGGSGRCGWKSPS*ISTGPS
Trigger: GGAGGGGCCTGTGGAGATCCAGGACGGGCTCTTCCA...CCCACATCGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTGAGCCCCCGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCCCGGTCGCCTTCATCTaGCAGGCCGACACCTCCCCG +
Preference number: 4 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVPVAFI*QADTSP
Trigger: CGGGGAGGTGTCGGCCTGCCAGATGAAGGCGACCGG...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp AGTCGGGGGCTCACGGCACCAGCATGTGCGTCTGGCGGCTCAGGCCGATGTGGGACTTGGACGAGGAGCTaGAGCCCCCGGAGATGCCCT +
Preference number: 4 (lower is better)
Translates to: SRGLTAPACASGGSGRCGTWTRS*SPRRCP
Trigger: AGGGCATCTCCGGGGGCTCCAGCTCCTCGTCCAAGT...CCCACATCGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTGAGCCCCCGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp AGTCGGGGGCTCACGGCACCAGCATGTGCGTCTGGCGGCTCAGGCCGATGTGGGTGGGCCGCAAGGAGATaGCGTGATGGGGACCTGGGT +
Preference number: 4 (lower is better)
Translates to: SRGLTAPACASGGSGRCGWAARR*RDGDLG
Trigger: ACCCAGGTCCCCATCACGCCATCTCCTTGCGGCCCA...CCCACATCGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTGAGCCCCCGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGGTGCAGGGGACCATGTaGCGTGCAGGCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: DLATVHLPLRSVALGSQWVQGTM*RAGHQH
Trigger: GTGCTGGTGGCCTGCACGCCACATGGTCCCCTGCAC...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCGTGCAGGGGACCATGTaGCGTGCAGGCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSVQGTM*RAGHQH
Trigger: GTGCTGGTGGCCTGCACGCCACATGGTCCCCTGCAC...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp AGTCGGGGGCTCACGGCACCAGCATGTGCGTCTGGCGGCTCAGGCCGATGTGGGGAGTGCAGGGGACCATaGTGCCCCAGTGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SRGLTAPACASGGSGRCGECRGP*CPSVQR
Trigger: CCTCTGCACACTGGGGCACCATGGTCCCCTGCACTC...CCCACATCGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTGAGCCCCCGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCTGCCTCGGGCGGCGATaGAGGCAGAGTTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGCLGRR*RQSWPP
Trigger: TGGTGGCCAACTCTGCCTTCATCGCCGCCCGAGGCA...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCGGGTTCACTGACCCCTaGCCTGGCCACCGTGCACCT +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGGFTDP*PGHRAP
Trigger: AGGTGCACGGTGGCCAGGTCAGGGGTCAGTGAACCC...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCGTGTCCCCTGGGAGATaGGACGGACCAGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVVSPGR*DGPAPV
Trigger: CACTGGGGCTGGTCCGTCTCATCTCCCAGGGGACAC...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCACTCCCTGCAGGACGTaGCACCCCCAAGTGGGACCT +
Preference number: 4 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSTPCRT*HPQVGP
Trigger: AGGTCCCACTTGGGGGTGTCACGTCCTGCAGGGAGT...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGTGGAGCCCCCGGAGATaGCCTTCATGTCGTCCGGCA +
Preference number: 4 (lower is better)
Translates to: DLATVHLPLRSVALGSQWWSPRR*PSCRPA
Trigger: TGCCGGACGACATGAAGGGCATCTCCGGGGGCTCCA...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCTCCCTGCGGCTTGGATaGACTCCCTCTGAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSSLRLG*TPSEPA
Trigger: AGCCGGCTCAGAGGGAGTGCATCCAAGCCGCAGGGA...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCCGTCCCTGCCCTTGCTaGACGAGAGAGACGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGRPCPC*TRETPW
Trigger: CCAGGGCGTCTCTCTCGTCCAGCAAGGGCAGGGACG...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCTCCTCCCCCATGGGCTaGGCTTCCAGCCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSSSPMG*ASSHFH
Trigger: GTGGAAGTGGCTGGAAGCCCAGCCCATGGGGGAGGA...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGACCAGTCCTCCCCCATaGGCTGGGCTTCCAGCCACT +
Preference number: 4 (lower is better)
Translates to: DLATVHLPLRSVALGSQWTSPPP*AGLPAT
Trigger: AGTGGCTGGAAGCCCAGCCCATGGGGGAGGACTGGT...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGGGCGTGATGGGGACCTaGGTGGAGGGAACCACGTGT +
Preference number: 4 (lower is better)
Translates to: DLATVHLPLRSVALGSQWGVMGT*VEGTTC
Trigger: ACACGTGGTTCCCTCCACCCAGGTCCCCATCACGCC...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCCGGCTCAGGCCGATGTaGGCTTTCTCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSRLRPM*AFSSLG
Trigger: GCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCG...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCACAGCGGGGGCAGCTTaGGCTTGGCCAGGTACTTCT +
Preference number: 4 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSTAGAA*AWPGTS
Trigger: AGAAGTACCTGGCCAAGCTCAAGCTGCCCCCGCTGT...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp AGTCGGGGGCTCACGGCACCAGCATGTGCGTCTGGCGGCTCAGGCCGATGTGGGTCACGGGCTCTGAGATaGTCCGGTGCTTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SRGLTAPACASGGSGRCGSRALR*SGASAP
Trigger: AGGAGCTGAAGCACCGGATCATCTCAGAGCCCGTGA...CCCACATCGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTGAGCCCCCGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCCACGGCACCAGCATGTaGGTCTGGCGGCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGHGTSM*VWRLRP
Trigger: CGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTG...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCAGTGGGGCCAGGGGCTaGGGCCAGGGTTCACTGACC +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGSGARG*GQGSLT
Trigger: GGTCAGTGAACCCTGGCCGCAGCCCCTGGCCCCACT...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCCATGGTGCCCCAGTGTaGAGAGGACCACGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTHGAPV*RGPRRR
Trigger: GCGGCGCCGTGGTCCTCTGCACACTGGGGCACCATG...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCCATGGTGCCCCAGTGTaGAGAGGACCACGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGHGAPV*RGPRRR
Trigger: GCGGCGCCGTGGTCCTCTGCACACTGGGGCACCATG...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCCAGAAGAGTTTGGCCTaGGGGTCCAGGTACTGGGCC +
Preference number: 4 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSQKSLA*GSRYWA
Trigger: GGCCCAGTACCTGGACCCCCAGGCCAAACTCTTCTG...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGCAGAAGAGTTTGGCCTaGGGGTCCAGGTACTGGGCC +
Preference number: 4 (lower is better)
Translates to: DLATVHLPLRSVALGSQWQKSLA*GSRYWA
Trigger: GGCCCAGTACCTGGACCCCCAGGCCAAACTCTTCTG...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCACCAGTCCTCCCCCATaGGCTGGGCTTCCAGCCACT +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGTSPPP*AGLPAT
Trigger: AGTGGCTGGAAGCCCAGCCCATGGGGGAGGACTGGT...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCGGGGGCCATGAAACCTaGGGTCCCTGCGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVGGHET*GPCVAL
Trigger: AAGGGCTACGCAGGGACCCCAGGTTTCATGGCCCCC...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCGGGGGCCATGAAACCTaGGGTCCCTGCGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGGGHET*GPCVAL
Trigger: AAGGGCTACGCAGGGACCCCAGGTTTCATGGCCCCC...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCACCAGCATGTGCGTCTaGCGGCTCAGGCCGATGTGG +
Preference number: 4 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVTSMCV*RLRPMW
Trigger: CCACATCGGCCTGAGCCGCCAGACGCACATGCTGGT...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp AGTCGGGGGCTCACGGCACCAGCATGTGCGTCTGGCGGCTCAGGCCGATGTGGGGCTCTGGGAAGCCAATaGCTAAGGTCTTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SRGLTAPACASGGSGRCGALGSQ*LRSWEA
Trigger: GGCCTCCCAAGACCTTAGCCATTGGCTTCCCAGAGC...CCCACATCGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTGAGCCCCCGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCGAGTGCAGGGGACCATaGTGCCCCAGTGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGECRGP*CPSVQR
Trigger: CCTCTGCACACTGGGGCACCATGGTCCCCTGCACTC...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCATGTCGTCCGGCATCTaGCCGTCCGAGCGCCACACG +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTMSSGI*PSERHT
Trigger: CGTGTGGCGCTCGGACGGTCAGATGCCGGACGACAT...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCCGCAAGGAGATGGCGTaGTGGGGACCTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTRKEMA*WGPGWR
Trigger: CCTCCACCCAGGTCCCCATCACGCCATCTCCTTGCG...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCGGGTTCACTGACCCCTaGCCTGGCCACCGTGCACCT +
Preference number: 4 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGGFTDP*PGHRAP
Trigger: AGGTGCACGGTGGCCAGGTCAGGGGTCAGTGAACCC...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCGACCCCAAGATGCACTaGGACCCCCAGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVDPKMH*DPQTPH
Trigger: GTGTGGAGTCTGGGGGTCTCAGTGCATCTTGGGGTC...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCCCCGCCAAGAGCAGCTaGGGTGCTTCCGGGACTCAG +
Preference number: 4 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGPAKSS*GASGTQ
Trigger: CTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGG...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGCATCTTCTCTCCCCGTaGCCACATGTGGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: DLATVHLPLRSVALGSQWHLLSP*PHVAGS
Trigger: TGACCCTGCCACATGTGGTCACGGGGAGAGAAGATG...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCTGCCCACTGCAGCACTaGCTCTCAGGCAGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGCPLQH*LSGSCL
Trigger: GAGACAGCTGCCTGAGAGTCAGTGCTGCAGTGGGCA...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp AGTCGGGGGCTCACGGCACCAGCATGTGCGTCTGGCGGCTCAGGCCGATGTGGGTCAGGAAGTACAGGCTaGCCAGGTACTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SRGLTAPACASGGSGRCGSGSTG*PGTPGR
Trigger: CCTTCCAGGAGTACCTGGGCAGCCTGTACTTCCTGA...CCCACATCGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTGAGCCCCCGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCCAGGGGTGGGAACTTTaGACCAGCTGCCGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVQGWEL*TSCRQL
Trigger: CAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTG...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGCAAGAGCAGCTGAGGTaGTTCCGGGACTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: DLATVHLPLRSVALGSQWQEQLR*FRDSGS
Trigger: TGACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTG...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGAAACGGTCCTGGCTTTaGCCGCCAAGAGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: DLATVHLPLRSVALGSQWKRSWL*PPRAAE
Trigger: CTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCGTTT...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCTTCTACCACCAGCTCTaGCCCAAGGCTCACGGGGAC +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGFYHQL*PKAHGD
Trigger: GTCCCCGTGAGCCTTGGGGCAGAGCTGGTGGTAGAA...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCTTCTACCACCAGCTCTaGCCCAAGGCTCACGGGGAC +
Preference number: 4 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVFYHQL*PKAHGD
Trigger: GTCCCCGTGAGCCTTGGGGCAGAGCTGGTGGTAGAA...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCATAGGCCCTGCCCACTaGAGCACTGACTCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSIGPAH*STDSQA
Trigger: TGCCTGAGAGTCAGTGCTGCAGTGGGCAGGGCCTAT...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGATAGGCCCTGCCCACTaGAGCACTGACTCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: DLATVHLPLRSVALGSQWIGPAH*STDSQA
Trigger: TGCCTGAGAGTCAGTGCTGCAGTGGGCAGGGCCTAT...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGTCCAGCCCTCCCCAGTaGGGCCAGGGGCTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRRESSPPQ*GQGLRP
Trigger: TGGCCGCAGCCCCTGGCCCCACTGGGGAGGGCTGGA...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGATGCCAGGTGCATTGTaGGTGGGGCCGAGCTGTATG +
Preference number: 4 (lower is better)
Translates to: DLATVHLPLRSVALGSQWMPGAL*VGPSCM
Trigger: CATACAGCTCGGCCCCACCCACAATGCACCTGGCAT...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCCTTTCCCTAGGACCCTaGAGTCCAGGAACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSLSLGP*SPGTSP
Trigger: AGGACTGGTTCCTGGACTTCAGGGTCCTAGGGAAAG...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACGGAGCTCGGGGGCCATaGAACCTGGGGTCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDGARGP*NLGSLR
Trigger: ACGCAGGGACCCCAGGTTTCATGGCCCCCGAGCTCC...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGAACCAGACACATCCCTaGCTTGGACGAGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: DLATVHLPLRSVALGSQWNQTHP*LGRGAG
Trigger: TCCAGCTCCTCGTCCAAGTCAGGGATGTGTCTGGTT...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATGCGGCCAGGGTTCACTaGCCCCTGACCTGGCCACCG +
Preference number: 4 (lower is better)
Translates to: PVSISHIISHLPRPLSPNAARVH*PLTWPP
Trigger: CGGTGGCCAGGTCAGGGGTCAGTGAACCCTGGCCGC...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGACCTGTGGCCCGTCCCTaGCCTTGCTGGACGAGAGAG +
Preference number: 4 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGPVARP*PCWTRE
Trigger: CTCTCTCGTCCAGCAAGGGCAGGGACGGGCCACAGG...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCCGTAGCCCTTGGTCTTaGTCTGTCCGTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGRSPWS*SVRPAA
Trigger: AGCTGCTGGACGGACAGAGCAAGACCAAGGGCTACG...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGATCGTACTCCTCGCCCTaGAGGAGCTCGGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGSYSSP*RSSGAM
Trigger: CATGGCCCCCGAGCTCCTGCAGGGCGAGGAGTACGA...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCTCGATCATCTCCTCCTaGCAGGGGATGGGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGSIISS*QGMGQL
Trigger: CAACTGCCCCATCCCCTGGCAGGAGGAGATGATCGA...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCTGGAGCCCCCGGAGATaGCCTTCATGTCGTCCGGCA +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGWSPRR*PSCRPA
Trigger: TGCCGGACGACATGAAGGGCATCTCCGGGGGCTCCA...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGCACGGCACCAGCATGTaGGTCTGGCGGCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLHGTSM*VWRLRP
Trigger: CGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTG...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGAGTGGGGCCAGGGGCTaGGGCCAGGGTTCACTGACC +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRSGARG*GQGSLT
Trigger: GGTCAGTGAACCCTGGCCGCAGCCCCTGGCCCCACT...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACACACGGCGCCGCAGGGTaGAGGGGACCATGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTHGAAG*RGPCGV
Trigger: CACGCCACATGGTCCCCTGCACCCTGCGGCGCCGTG...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCAAACGGTCCTGGCTTTaGCCGCCAAGAGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGKRSWL*PPRAAE
Trigger: CTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCGTTT...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCACGAGAGAGACGCCCTaGCCCTGTCGAGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGTRETP*PCRGFL
Trigger: CAGGAACCCTCGACAGGGCCAGGGCGTCTCTCTCGT...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCGGTCTGGGCCTTCTGTaGCTGGAGGTCATTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGGLGLL*LEVIVC
Trigger: GCAGACAATGACCTCCAGCCACAGAAGGCCCAGACC...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCCCTCCTGCCAGGGGATaGGGCAGTTGCCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTPPARG*GSCQWQ
Trigger: TTGCCACTGGCAACTGCCCCATCCCCTGGCAGGAGG...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCACTTGGACGAGGAGCTaGAGCCCCCGGAGATGCCCT +
Preference number: 4 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGTWTRS*SPRRCP
Trigger: AGGGCATCTCCGGGGGCTCCAGCTCCTCGTCCAAGT...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCCGGCTCAGGCCGATGTaGGCTTTCTCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGRLRPM*AFSSLG
Trigger: GCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCG...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCACCAGCATGTGCGTCTaGCGGCTCAGGCCGATGTGG +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTTSMCV*RLRPMW
Trigger: CCACATCGGCCTGAGCCGCCAGACGCACATGCTGGT...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCGCTCTGGGAAGCCAATaGCTAAGGTCTTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGALGSQ*LRSWEA
Trigger: GGCCTCCCAAGACCTTAGCCATTGGCTTCCCAGAGC...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCAGGAAGAGGACGACCTaGCAGCCTGAGGACTGTGAG +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGRKRTT*QPEDCE
Trigger: CTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCT...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCAGGAAGAGGACGACCTaGCAGCCTGAGGACTGTGAG +
Preference number: 4 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVRKRTT*QPEDCE
Trigger: CTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCT...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCGCTCCAGGCCGCAGATaGTCTGCGCCGTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGAPGRR*SAPCRR
Trigger: TCTTCTACACGGCGCAGATCATCTGCGGCCTGGAGC...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCGTACTTCACGGGCTCTaGGATGATCCGGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGVLHGL*DDPVLQ
Trigger: CTGAAGCACCGGATCATCTCAGAGCCCGTGAAGTAC...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGCGCAAGGAGATGGCGTaGTGGGGACCTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRRKEMA*WGPGWR
Trigger: CCTCCACCCAGGTCCCCATCACGCCATCTCCTTGCG...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCGTCAGCTGGACACCCTaGGATAAGGAGACCCCAAGA +
Preference number: 4 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVVSWTP*DKETPR
Trigger: TCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGAC...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCCCGCCAAGAGCAGCTaGGGTGCTTCCGGGACTCAG +
Preference number: 4 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDPAKSS*GASGTQ
Trigger: CTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGG...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCTGCCCACTGCAGCACTaGCTCTCAGGCAGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGCPLQH*LSGSCL
Trigger: GAGACAGCTGCCTGAGAGTCAGTGCTGCAGTGGGCA...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGCCTGTGGCCCGTCCCTaGCCTTGCTGGACGAGAGAG +
Preference number: 4 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLPVARP*PCWTRE
Trigger: CTCTCTCGTCCAGCAAGGGCAGGGACGGGCCACAGG...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGAAGGGTTGGGAGCTGCTaGCGTCAAAGCTGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGRVGSC*RQSCLG
Trigger: CCCGAGGCAGCTTTGACGGCAGCAGCTCCCAACCCT...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCGCTGAAAGAGCTTCTTaGCGATGGGCTGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVAERAS*RWAAPS
Trigger: GCTTGGAGCAGCCCATCGGCAAGAAGCTCTTTCAGC...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTCCAGGGCCGGCAGGTaGTTCTCTGCCGATTGTAGG +
Preference number: 4 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGSRAGR*FSADCR
Trigger: CCTACAATCGGCAGAGAAGCACCTGCCGGCCCTGGA...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCTCCAGGGCCGGCAGGTaGTTCTCTGCCGATTGTAGG +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTSRAGR*FSADCR
Trigger: CCTACAATCGGCAGAGAAGCACCTGCCGGCCCTGGA...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGACGATCCGCCTCTGGTaGAGGTGCTCCAGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRTIRLW*RCSRPQ
Trigger: CTGCGGCCTGGAGCACCTGCACCAGAGGCGGATCGT...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACTCGTACTCCTCGCCCTaGAGGAGCTCGGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDSYSSP*RSSGAM
Trigger: CATGGCCCCCGAGCTCCTGCAGGGCGAGGAGTACGA...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGATGGAGCCCCCGGAGATaGCCTTCATGTCGTCCGGCA +
Preference number: 4 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGWSPRR*PSCRPA
Trigger: TGCCGGACGACATGAAGGGCATCTCCGGGGGCTCCA...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACACACGGCACCAGCATGTaGGTCTGGCGGCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTHGTSM*VWRLRP
Trigger: CGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTG...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATCCTGACTGCTGCCCTTaGCCTGTGGCCCGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PVSISHIISHLPRPLSPNPDCCP*PVARPC
Trigger: GCAGGGACGGGCCACAGGCCAAGGGCAGCAGTCAGG...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGTCCTGGAAGGGGGCTTaGCCCAGGTGTGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLSWKGA*PRCARV
Trigger: CACCCTGGCACACCTGGGCCAAGCCCCCTTCCAGGA...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGCTGCCCAGGTACTCCTaGAAGGGGGCTTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLLPRYS*KGAWPR
Trigger: CCTGGGCCAAGCCCCCTTCCAGGAGTACCTGGGCAG...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp AGTCGGGGGCTCACGGCACCAGCATGTGCGTCTGGCGGCTCAGGCCGATGTGGGGACAGTTTTGGAGTCTaGGATGAAAGGGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: SRGLTAPACASGGSGRCGDSFGV*DERGHQ
Trigger: CTGATGCCCCCTTTCATCCCAGACTCCAAAACTGTC...CCCACATCGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTGAGCCCCCGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACGTGCAGGGGACCATGTaGCGTGCAGGCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDVQGTM*RAGHQH
Trigger: GTGCTGGTGGCCTGCACGCCACATGGTCCCCTGCAC...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCCCACTGGTACAACAGTaGCCGGGGCTCAAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGPLVQQ*PGLKGS
Trigger: ACTTCCTTTGAGCCCCGGCCACTGTTGTACCAGTGG...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCTGTCTCTGCCATTTCTaGGAGAGAGGCCGAGACCCA +
Preference number: 4 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVCLCHF*ERGRDP
Trigger: TGGGTCTCGGCCTCTCTCCCAGAAATGGCAGAGACA...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGTGCCTCGGGCGGCGATaGAGGCAGAGTTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRRECLGRR*RQSWPP
Trigger: TGGTGGCCAACTCTGCCTTCATCGCCGCCCGAGGCA...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCTTTTGGAGTCTGGGATaGAAGGGGGCATCAGCATCC +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGFWSLG*KGASAS
Trigger: GGATGCTGATGCCCCCTTTCATCCCAGACTCCAAAA...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGATGTCGTCCGGCATCTaGCCGTCCGAGCGCCACACG +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRREMSSGI*PSERHT
Trigger: CGTGTGGCGCTCGGACGGTCAGATGCCGGACGACAT...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACACGCAAGGAGATGGCGTaGTGGGGACCTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTRKEMA*WGPGWR
Trigger: CCTCCACCCAGGTCCCCATCACGCCATCTCCTTGCG...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACGTGTCCCCTGGGAGATaGGACGGACCAGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDVSPGR*DGPAPV
Trigger: CACTGGGGCTGGTCCGTCTCATCTCCCAGGGGACAC...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGACAAGGCCCGTGGCCTaGAGTGTCCCCTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRTRPVA*SVPWEM
Trigger: CATCTCCCAGGGGACACTTCAGGCCACGGGCCTTGT...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCCATCTTCTCTCCCCGTaGCCACATGTGGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGHLLSP*PHVAGS
Trigger: TGACCCTGCCACATGTGGTCACGGGGAGAGAAGATG...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGACTCCCTGCAGGACGTaGCACCCCCAAGTGGGACCT +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRTPCRT*HPQVGP
Trigger: AGGTCCCACTTGGGGGTGTCACGTCCTGCAGGGAGT...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGGATGTGGAGTTCTGTTaGGATCTGTGGGAAGACGTG +
Preference number: 4 (lower is better)
Translates to: DLATVHLPLRSVALGSQWDVEFC*DLWEDV
Trigger: CACGTCTTCCCACAGATCTCAACAGAACTCCACATC...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACGGGAGGGTTGGGAGCTaGTGCCGTCAAAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDGRVGS*CRQSCL
Trigger: GAGGCAGCTTTGACGGCAGCAGCTCCCAACCCTCCC...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCTGCAGGCATACAGCTTaGCGGTCGCCTTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTCRHTA*RSPSSG
Trigger: GCCAGATGAAGGCGACCGGCAAGCTGTATGCCTGCA...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATACGATCCGCCTCTGGTaGAGGTGCTCCAGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: PVSISHIISHLPRPLSPNTIRLW*RCSRPQ
Trigger: CTGCGGCCTGGAGCACCTGCACCAGAGGCGGATCGT...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCAGGGGATGGGGCAGTTaGCAGTGGCAAATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGRGWGS*QWQIPE
Trigger: TTCAGGAATTTGCCACTGGCAACTGCCCCATCCCCT...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCGAACTTTGCACCAGCTaGCGTCAGCTGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGELCTS*RQLDTL
Trigger: CAGGGTGTCCAGCTGACGGCAGCTGGTGCAAAGTTC...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCCAAGAGCAGCTGAGGTaGTTCCGGGACTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTQEQLR*FRDSGS
Trigger: TGACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTG...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCGTTGGAAATGCCAGGTaGATTGTGGGTGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGVGNAR*IVGGAE
Trigger: CTCGGCCCCACCCACAATGCACCTGGCATTTCCAAC...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp AGTCGGGGGCTCACGGCACCAGCATGTGCGTCTGGCGGCTCAGGCCGATGTGGGTGTCCTGGAGGCAGTTaGAACAGAACTAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: SRGLTAPACASGGSGRCGCPGGS*NRTNFL
Trigger: CAGGAAGTTAGTTCTGTTGCAACTGCCTCCAGGACA...CCCACATCGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTGAGCCCCCGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGTCCCTGCGGCTTGGATaGACTCCCTCTGAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRSLRLG*TPSEPA
Trigger: AGCCGGCTCAGAGGGAGTGCATCCAAGCCGCAGGGA...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACTCCCTGCGGCTTGGATaGACTCCCTCTGAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDSLRLG*TPSEPA
Trigger: AGCCGGCTCAGAGGGAGTGCATCCAAGCCGCAGGGA...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCATAGGCCCTGCCCACTaGAGCACTGACTCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTIGPAH*STDSQA
Trigger: TGCCTGAGAGTCAGTGCTGCAGTGGGCAGGGCCTAT...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCCCGGGAGGTTTATTTTaGAGTCCAGGTTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSPGGLF*SPGLLP
Trigger: GGGAAGCAAACCTGGACTGCAAAATAAACCTCCCGG...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGTGGGGGTCCAGGTACTaGGCCAGGATGGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRREWGSRY*ARMVWA
Trigger: GGCCCAGACCATCCTGGCCCAGTACCTGGACCCCCA...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGTCCTGGAAGGGGGCTTaGCCCAGGTGTGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRRESWKGA*PRCARV
Trigger: CACCCTGGCACACCTGGGCCAAGCCCCCTTCCAGGA...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGCTGCCCAGGTACTCCTaGAAGGGGGCTTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRRELPRYS*KGAWPR
Trigger: CCTGGGCCAAGCCCCCTTCCAGGAGTACCTGGGCAG...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCTCCCTGCGTAGCCCTTaGTCTTGCTCTGTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTSLRSP*SCSVRP
Trigger: TGGACGGACAGAGCAAGACCAAGGGCTACGCAGGGA...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCCCCCATCGAGCCGTATaGGTCCTTTTCCTCCACGTG +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGPHRAV*VLFLHV
Trigger: CACGTGGAGGAAAAGGACCCATACGGCTCGATGGGG...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGTCCAGCCCTCCCCAGTaGGGCCAGGGGCTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTSSPPQ*GQGLRP
Trigger: TGGCCGCAGCCCCTGGCCCCACTGGGGAGGGCTGGA...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCAGCTGTATGAGAAGGTaGGCTGTGAGTGTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVSCMRR*AVSVFP
Trigger: CGGGAAGACACTCACAGCCCACCTTCTCATACAGCT...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCATGCCAGGTGCATTGTaGGTGGGGCCGAGCTGTATG +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTMPGAL*VGPSCM
Trigger: CATACAGCTCGGCCCCACCCACAATGCACCTGGCAT...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CAA 72 bp GAGGAGCGTGGCTCTGGGAAGCCAATGGCTAAGGTCTaGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCAC +
Preference number: 4 (lower is better)
Translates to: EERGSGKPMAKV*GGQNRVSAPDH
Trigger: GTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCCAGAGCCACGCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACGCTCCAGGCCGCAGATaGTCTGCGCCGTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDAPGRR*SAPCRR
Trigger: TCTTCTACACGGCGCAGATCATCTGCGGCCTGGAGC...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGATCACGGGCTCTGAGATaGTCCGGTGCTTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGSRALR*SGASAP
Trigger: AGGAGCTGAAGCACCGGATCATCTCAGAGCCCGTGA...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGCGCAGGTCTCATCTCTaGACCCCAGGCGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRRERRSHL*TPGASP
Trigger: CGGAGAAGCGCCTGGGGTTCAGAGATGAGACCTGCG...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACACGCAGGTCTCATCTCTaGACCCCAGGCGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTRRSHL*TPGASP
Trigger: CGGAGAAGCGCCTGGGGTTCAGAGATGAGACCTGCG...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCCAAAGGCCACACCTTTaGCGGTGGAAAAGGCACCCA +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGQRPHL*RWKRHP
Trigger: TGGGTGCCTTTTCCACCGTCAAAGGTGTGGCCTTTG...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCCAAAGGCCACACCTTTaGCGGTGGAAAAGGCACCCA +
Preference number: 4 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGQRPHL*RWKRHP
Trigger: TGGGTGCCTTTTCCACCGTCAAAGGTGTGGCCTTTG...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAACCAGACACATCCCTaGCTTGGACGAGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTNQTHP*LGRGAG
Trigger: TCCAGCTCCTCGTCCAAGTCAGGGATGTGTCTGGTT...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGCCGAGTCTCTGCCCCTaGCCACACGGTTGGTCAATC +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRPSLCP*PHGWSI
Trigger: GATTGACCAACCGTGTGGTCAGGGGCAGAGACTCGG...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGGCGGCCAGGGTTCACTaGCCCCTGACCTGGCCACCG +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTAARVH*PLTWPP
Trigger: CGGTGGCCAGGTCAGGGGTCAGTGAACCCTGGCCGC...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACACAAGGCCCGTGGCCTaGAGTGTCCCCTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDTRPVA*SVPWEM
Trigger: CATCTCCCAGGGGACACTTCAGGCCACGGGCCTTGT...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAACAAGGCCCGTGGCCTaGAGTGTCCCCTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTTRPVA*SVPWEM
Trigger: CATCTCCCAGGGGACACTTCAGGCCACGGGCCTTGT...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGACTCCCTGCAGGACGTaGCACCCCCAAGTGGGACCT +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRRETPCRT*HPQVGP
Trigger: AGGTCCCACTTGGGGGTGTCACGTCCTGCAGGGAGT...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACTGCCCACTGCAGCACTaGCTCTCAGGCAGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDCPLQH*LSGSCL
Trigger: GAGACAGCTGCCTGAGAGTCAGTGCTGCAGTGGGCA...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCAAAAGACGTGAAATATaGAGTCGGGGGCTCACGGCA +
Preference number: 4 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVKRREI*SRGLTA
Trigger: TGCCGTGAGCCCCCGACTGCATATTTCACGTCTTTT...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCAAGGAGACCCCAAGATaGACTGAGACCCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGKETPR*TETPRL
Trigger: GAGTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTT...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGCAGGGGTGGGAACTTTaGACCAGCTGCCGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRQGWEL*TSCRQL
Trigger: CAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTG...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCGGACTCCAGTGCTGCTaGTACTGGGAACACAGAGAG +
Preference number: 4 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGGLQCC*YWEHRE
Trigger: CTCTCTGTGTTCCCAGTAGCAGCAGCACTGGAGTCC...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGTGTCCTGGAGGCAGTTaGAACAGAACTAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: DLATVHLPLRSVALGSQWCPGGS*NRTNFL
Trigger: CAGGAAGTTAGTTCTGTTGCAACTGCCTCCAGGACA...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCAGAACAGTCTGCAGGTaGATGAGGCAACTTGACAGG +
Preference number: 4 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVRTVCR*MRQLDR
Trigger: CCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCT...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAGAGCTTCTTGCCGATaGGCTGCTCCAAGCACACAC +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTRASCR*AAPSTH
Trigger: GTGTGTGCTTGGAGCAGCCCATCGGCAAGAAGCTCT...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGATGGGCCTTCTGTGGCTaGAGGTCATTGTCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGWAFCG*RSLSAV
Trigger: CACGGCAGACAATGACCTCCAGCCACAGAAGGCCCA...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAGCTGCAGAAGAGTTTaGCCTGGGGGTCCAGGTACT +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTSCRRV*PGGPGT
Trigger: AGTACCTGGACCCCCAGGCCAAACTCTTCTGCAGCT...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACTGGAAGAGCCCGTCCTaGATCTCCACAGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDWKSPS*ISTGPS
Trigger: GGAGGGGCCTGTGGAGATCCAGGACGGGCTCTTCCA...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGCCTCCTGCCAGGGGATaGGGCAGTTGCCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRREPPARG*GSCQWQ
Trigger: TTGCCACTGGCAACTGCCCCATCCCCTGGCAGGAGG...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATCCTCCTGCCAGGGGATaGGGCAGTTGCCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: PVSISHIISHLPRPLSPNPPARG*GSCQWQ
Trigger: TTGCCACTGGCAACTGCCCCATCCCCTGGCAGGAGG...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGGACACATCCCTGACTTaGACGAGGAGCTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRDTSLT*TRSWSP
Trigger: GGGGCTCCAGCTCCTCGTCCAAGTCAGGGATGTGTC...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCTCCTTTTCCTCCACGTaGACTCTGGGGCGTCACCTA +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGSFSST*TLGRHL
Trigger: TAGGTGACGCCCCAGAGTCCACGTGGAGGAAAAGGA...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGGGCGTGATGGGGACCTaGGTGGAGGGAACCACGTGT +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRREGVMGT*VEGTTC
Trigger: ACACGTGGTTCCCTCCACCCAGGTCCCCATCACGCC...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATGGGCCGCAAGGAGATaGCGTGATGGGGACCTGGGT +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTWAARR*RDGDLG
Trigger: ACCCAGGTCCCCATCACGCCATCTCCTTGCGGCCCA...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCCAATGGCTAAGGTCTTaGGAGGCCAAAACCGAGTCT +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGQWLRS*EAKTES
Trigger: AGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGAATGCCAGGTGCATTGTaGGTGGGGCCGAGCTGTATG +
Preference number: 4 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGMPGAL*VGPSCM
Trigger: CATACAGCTCGGCCCCACCCACAATGCACCTGGCAT...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGGGCTTCTTCTCCCACTaGTACAACAGTGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLGFFSH*YNSGRG
Trigger: GCCCCGGCCACTGTTGTACCAGTGGGAGAAGAAGCC...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCTGTCTCTGCCATTTCTaGGAGAGAGGCCGAGACCCA +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTCLCHF*ERGRDP
Trigger: TGGGTCTCGGCCTCTCTCCCAGAAATGGCAGAGACA...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGAAGGAAGAGGACGACCTaGCAGCCTGAGGACTGTGAG +
Preference number: 4 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGRKRTT*QPEDCE
Trigger: CTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCT...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCCTCACCCAGGGGCGTaGCCTATCTTCCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDPHPGA*PIFPPE
Trigger: TTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGG...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACTCTCAAACTCCAGGCTaGGGCTGTCGCGGAGGGACT +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDSQTPG*GCRGGT
Trigger: AGTCCCTCCGCGACAGCCTCAGCCTGGAGTTTGAGA...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATCTCAAACTCCAGGCTaGGGCTGTCGCGGAGGGACT +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTSQTPG*GCRGGT
Trigger: AGTCCCTCCGCGACAGCCTCAGCCTGGAGTTTGAGA...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACTCACGGGCTCTGAGATaGTCCGGTGCTTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDSRALR*SGASAP
Trigger: AGGAGCTGAAGCACCGGATCATCTCAGAGCCCGTGA...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGAGTACTTCACGGGCTCTaGGATGATCCGGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGVLHGL*DDPVLQ
Trigger: CTGAAGCACCGGATCATCTCAGAGCCCGTGAAGTAC...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCCCTTGCTGGCCTGGCTaGACTTATCAGGGTACTTCA +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGPCWPG*TYQGTS
Trigger: TGAAGTACCCTGATAAGTTCAGCCAGGCCAGCAAGG...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCTTTTGGAGTCTGGGATaGAAGGGGGCATCAGCATCC +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGFWSLG*KGASAS
Trigger: GGATGCTGATGCCCCCTTTCATCCCAGACTCCAAAA...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACCCGAGTCTCTGCCCCTaGCCACACGGTTGGTCAATC +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDPSLCP*PHGWSI
Trigger: GATTGACCAACCGTGTGGTCAGGGGCAGAGACTCGG...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACGACCCCAAGATGCACTaGGACCCCCAGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDDPKMH*DPQTPH
Trigger: GTGTGGAGTCTGGGGGTCTCAGTGCATCTTGGGGTC...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGGCCCGTCCCTGCCCTTaGTGGACGAGAGAGACGCCC +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTARPCP*WTRETP
Trigger: GGGCGTCTCTCTCGTCCAGCAAGGGCAGGGACGGGC...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGGGGGACCATGTGGCGTaGAGGCCACCAGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTGDHVA*RPPAQG
Trigger: GCCCTGTGCTGGTGGCCTGCACGCCACATGGTCCCC...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGGAACTTTGCACCAGCTaGCGTCAGCTGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLELCTS*RQLDTL
Trigger: CAGGGTGTCCAGCTGACGGCAGCTGGTGCAAAGTTC...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCGCTTTAGGACTCCAGTaGTGCTGCTACTGGGAACAC +
Preference number: 4 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGALGLQ*CCYWEH
Trigger: GTGTTCCCAGTAGCAGCAGCACTGGAGTCCTAAAGC...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGTTCTACCACCAGCTCTaGCCCAAGGCTCACGGGGAC +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRREFYHQL*PKAHGD
Trigger: GTCCCCGTGAGCCTTGGGGCAGAGCTGGTGGTAGAA...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGGGTCTGGGCCTTCTGTaGCTGGAGGTCATTGTCTGC +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRGLGLL*LEVIVC
Trigger: GCAGACAATGACCTCCAGCCACAGAAGGCCCAGACC...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGTCCCTGCGTAGCCCTTaGTCTTGCTCTGTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLSLRSP*SCSVRP
Trigger: TGGACGGACAGAGCAAGACCAAGGGCTACGCAGGGA...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAGACACATCCCTGACTTaGACGAGGAGCTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTDTSLT*TRSWSP
Trigger: GGGGCTCCAGCTCCTCGTCCAAGTCAGGGATGTGTC...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGATCCTTTTCCTCCACGTaGACTCTGGGGCGTCACCTA +
Preference number: 4 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGSFSST*TLGRHL
Trigger: TAGGTGACGCCCCAGAGTCCACGTGGAGGAAAAGGA...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCTTGGCTTACTCCCTCTaGAGAGCATCTTATGTCTTC +
Preference number: 4 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSLAYSL*RASYVF
Trigger: GAAGACATAAGATGCTCTCCAGAGGGAGTAAGCCAA...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACGAGAGCAAACGGTCCTaGCTTTGCCCGCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDESKRS*LCPPRA
Trigger: TGCTCTTGGCGGGCAAAGCCAGGACCGTTTGCTCTC...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATATGCACAAGGCCCGTaGCCTGAAGTGTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTYAQGP*PEVSPG
Trigger: CCCAGGGGACACTTCAGGCCACGGGCCTTGTGCATA...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGTATGCACAAGGCCCGTaGCCTGAAGTGTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRREYAQGP*PEVSPG
Trigger: CCCAGGGGACACTTCAGGCCACGGGCCTTGTGCATA...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAGCTGTATGAGAAGGTaGGCTGTGAGTGTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTSCMRR*AVSVFP
Trigger: CGGGAAGACACTCACAGCCCACCTTCTCATACAGCT...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCGTTGGGTCCCCATTTTaGCTGCAGCCAGCAAATCTC +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGVGSPF*LQPANL
Trigger: GAGATTTGCTGGCTGCAGCCAAAATGGGGACCCAAC...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACCCTCACCCAGGGGCGTaGCCTATCTTCCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDPHPGA*PIFPPE
Trigger: TTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGG...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCAGGCCAGAGACACGATaGACCTGCTGTGTACTTTCA +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGRPETR*TCCVLS
Trigger: TGAAAGTACACAGCAGGTTCATCGTGTCTCTGGCCT...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGATCATCTCATACAGGGTaGCCCCCAGGGCAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGSSHTG*PPGQSS
Trigger: ACTACTTTGCCCTGGGGGTCACCCTGTATGAGATGA...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGGTACTTCACGGGCTCTaGGATGATCCGGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRVLHGL*DDPVLQ
Trigger: CTGAAGCACCGGATCATCTCAGAGCCCGTGAAGTAC...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGATGTCGTCCGGCATCTaGCCGTCCGAGCGCCACACG +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTMSSGI*PSERHT
Trigger: CGTGTGGCGCTCGGACGGTCAGATGCCGGACGACAT...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATCATCTTCTCTCCCCGTaGCCACATGTGGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PVSISHIISHLPRPLSPNHLLSP*PHVAGS
Trigger: TGACCCTGCCACATGTGGTCACGGGGAGAGAAGATG...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACTGCAGGCATACAGCTTaGCGGTCGCCTTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDCRHTA*RSPSSG
Trigger: GCCAGATGAAGGCGACCGGCAAGCTGTATGCCTGCA...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCTCTGAGATGATCCGGTaGTTCAGCTCCTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGSEMIR*FSSLFS
Trigger: GGAGAACAAGGAGCTGAAGCACCGGATCATCTCAGA...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATTCGATCATCTCCTCCTaGCAGGGGATGGGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: PVSISHIISHLPRPLSPNSIISS*QGMGQL
Trigger: CAACTGCCCCATCCCCTGGCAGGAGGAGATGATCGA...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAAAGACGTGAAATATaGAGTCGGGGGCTCACGGCA +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTKRREI*SRGLTA
Trigger: TGCCGTGAGCCCCCGACTGCATATTTCACGTCTTTT...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACAAGGAGACCCCAAGATaGACTGAGACCCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDKETPR*TETPRL
Trigger: GAGTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTT...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGAAACGGTCCTGGCTTTaGCCGCCAAGAGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRREKRSWL*PPRAAE
Trigger: CTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCGTTT...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGAGCTTTAGGACTCCAGTaGTGCTGCTACTGGGAACAC +
Preference number: 4 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGALGLQ*CCYWEH
Trigger: GTGTTCCCAGTAGCAGCAGCACTGGAGTCCTAAAGC...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCCTTCAGTGTTCAAAGTaGAGTTGGAAATGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVLQCSK*SWKCQV
Trigger: CACCTGGCATTTCCAACTGCACTTTGAACACTGAAG...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATACATCATCAGCCACTTaGCGCGGCCCCTCTCACCAA +
Preference number: 4 (lower is better)
Translates to: PVSISHIISHLPRPLSPNTSSAT*RGPSHQ
Trigger: TTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGT...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACACATCATCAGCCACTTaGCGCGGCCCCTCTCACCAA +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDTSSAT*RGPSHQ
Trigger: TTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGT...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAACATCATCAGCCACTTaGCGCGGCCCCTCTCACCAA +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTTSSAT*RGPSHQ
Trigger: TTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGT...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCCCGGGAGGTTTATTTTaGAGTCCAGGTTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGPGGLF*SPGLLP
Trigger: GGGAAGCAAACCTGGACTGCAAAATAAACCTCCCGG...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGTGGGCCTTCTGTGGCTaGAGGTCATTGTCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRREWAFCG*RSLSAV
Trigger: CACGGCAGACAATGACCTCCAGCCACAGAAGGCCCA...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCGACAGAGGTCGGCTTTaGTTTCAAACGCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGDRGRL*FQTHRP
Trigger: TGGCCTATGCGTTTGAAACCAAAGCCGACCTCTGTC...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCGACAGTTTTGGAGTCTaGGATGAAAGGGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTDSFGV*DERGHQ
Trigger: CTGATGCCCCCTTTCATCCCAGACTCCAAAACTGTC...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACACCCCATCGAGCCGTATaGGTCCTTTTCCTCCACGTG +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTPHRAV*VLFLHV
Trigger: CACGTGGAGGAAAAGGACCCATACGGCTCGATGGGG...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCCAATGGCTAAGGTCTTaGGAGGCCAAAACCGAGTCT +
Preference number: 4 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGQWLRS*EAKTES
Trigger: AGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGGCTCTGGGAAGCCAATaGCTAAGGTCTTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRREALGSQ*LRSWEA
Trigger: GGCCTCCCAAGACCTTAGCCATTGGCTTCCCAGAGC...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAGAGAGCAAACGGTCCTaGCTTTGCCCGCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTESKRS*LCPPRA
Trigger: TGCTCTTGGCGGGCAAAGCCAGGACCGTTTGCTCTC...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGACGGACCAGCCCCAGTaGGGAGGAGGGTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTTDQPQ*GGGSES
Trigger: GCTCTCTGACCCTCCTCCCCACTGGGGCTGGTCCGT...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATCCCCGTGACCACATGTaGCAGGGTCAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PVSISHIISHLPRPLSPNPRDHM*QGQASS
Trigger: AGAAGAAGCCTGACCCTGCCACATGTGGTCACGGGG...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCGATTGTAGGAACTGCTaGAAGAGCTTCTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTDCRNC*KSFLPM
Trigger: CATCGGCAAGAAGCTCTTTCAGCAGTTCCTACAATC...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGATGTCACCTCCGTTCATaGTGGTCATCACCAGACAGA +
Preference number: 4 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGCHLRS*WSSPDR
Trigger: TCTGTCTGGTGATGACCATCATGAACGGAGGTGACA...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCAGGAGCTCGGGGGCCATaGAACCTGGGGTCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEAGARGP*NLGSLR
Trigger: ACGCAGGGACCCCAGGTTTCATGGCCCCCGAGCTCC...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGCCTTGCTGGCCTGGCTaGACTTATCAGGGTACTTCA +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRPCWPG*TYQGTS
Trigger: TGAAGTACCCTGATAAGTTCAGCCAGGCCAGCAAGG...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACTTTTGGAGTCTGGGATaGAAGGGGGCATCAGCATCC +
Preference number: 4 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDFWSLG*KGASAS
Trigger: GGATGCTGATGCCCCCTTTCATCCCAGACTCCAAAA...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCACCGTGCACCTCCCGCTaGGGAGCGTGGCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEAPCTSR*GAWLWE
Trigger: TTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGG...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTGCGGCCAGGGTTCACTaGCCCCTGACCTGGCCACCG +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESAARVH*PLTWPP
Trigger: CGGTGGCCAGGTCAGGGGTCAGTGAACCCTGGCCGC...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATGTCAGCTGGACACCCTaGGATAAGGAGACCCCAAGA +
Preference number: 4 (lower is better)
Translates to: PVSISHIISHLPRPLSPNVSWTP*DKETPR
Trigger: TCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGAC...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAGTCAGCTGGACACCCTaGGATAAGGAGACCCCAAGA +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTVSWTP*DKETPR
Trigger: TCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGAC...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACGCTGAAAGAGCTTCTTaGCGATGGGCTGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDAERAS*RWAAPS
Trigger: GCTTGGAGCAGCCCATCGGCAAGAAGCTCTTTCAGC...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGTCAGCTCGCCAAAGATaGCCGTCTCGATCATCTCCT +
Preference number: 4 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLSARQR*PSRSSP
Trigger: AGGAGATGATCGAGACGGGCATCTTTGGCGAGCTGA...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACTCAGCTCGCCAAAGATaGCCGTCTCGATCATCTCCT +
Preference number: 4 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDSARQR*PSRSSP
Trigger: AGGAGATGATCGAGACGGGCATCTTTGGCGAGCTGA...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCTTGGTCAATCACCAATaGAGGAGGCTCCCTAAGAGT +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTLVNHQ*RRLPKS
Trigger: ACTCTTAGGGAGCCTCCTGCATTGGTGATTGACCAA...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAGGACTCCAGTGCTGCTaGTACTGGGAACACAGAGAG +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTGLQCC*YWEHRE
Trigger: CTCTCTGTGTTCCCAGTAGCAGCAGCACTGGAGTCC...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCTTTGCAGTCCAGGTTTaGTTCCCAAGAACAGTCTGC +
Preference number: 4 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTFAVQV*FPRTVC
Trigger: GCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAA...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACAGAGCTTCTTGCCGATaGGCTGCTCCAAGCACACAC +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDRASCR*AAPSTH
Trigger: GTGTGTGCTTGGAGCAGCCCATCGGCAAGAAGCTCT...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACAGCTGCAGAAGAGTTTaGCCTGGGGGTCCAGGTACT +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDSCRRV*PGGPGT
Trigger: AGTACCTGGACCCCCAGGCCAAACTCTTCTGCAGCT...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGTCCTCCCCCATGGGCTaGGCTTCCAGCCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTSSPMG*ASSHFH
Trigger: GTGGAAGTGGCTGGAAGCCCAGCCCATGGGGGAGGA...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACTCCTTTTCCTCCACGTaGACTCTGGGGCGTCACCTA +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDSFSST*TLGRHL
Trigger: TAGGTGACGCCCCAGAGTCCACGTGGAGGAAAAGGA...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGGGCGTGATGGGGACCTaGGTGGAGGGAACCACGTGT +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTGVMGT*VEGTTC
Trigger: ACACGTGGTTCCCTCCACCCAGGTCCCCATCACGCC...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGCCACTGGTACAACAGTaGCCGGGGCTCAAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRREPLVQQ*PGLKGS
Trigger: ACTTCCTTTGAGCCCCGGCCACTGTTGTACCAGTGG...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACACCACTGGTACAACAGTaGCCGGGGCTCAAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTPLVQQ*PGLKGS
Trigger: ACTTCCTTTGAGCCCCGGCCACTGTTGTACCAGTGG...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGTGTCTCTGCCATTTCTaGGAGAGAGGCCGAGACCCA +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRRECLCHF*ERGRDP
Trigger: TGGGTCTCGGCCTCTCTCCCAGAAATGGCAGAGACA...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCAAATCTCCAAAATTGTaGATTGCCAGGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGKSPKL*IARVLF
Trigger: GAAGAGGACCCTGGCAATCCACAATTTTGGAGATTT...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CAA 72 bp GAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGTaGGTCAATCACCAATGCAGGAGGCTCCCTAAGAGT +
Preference number: 4 (lower is better)
Translates to: EAKTESLPLTTR*VNHQCRRLPKS
Trigger: ACTCTTAGGGAGCCTCCTGCATTGGTGATTGACCAACCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATCATCTCATACAGGGTaGCCCCCAGGGCAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTSSHTG*PPGQSS
Trigger: ACTACTTTGCCCTGGGGGTCACCCTGTATGAGATGA...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACTCATCTCATACAGGGTaGCCCCCAGGGCAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDSSHTG*PPGQSS
Trigger: ACTACTTTGCCCTGGGGGTCACCCTGTATGAGATGA...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACCCTTGCTGGCCTGGCTaGACTTATCAGGGTACTTCA +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDPCWPG*TYQGTS
Trigger: TGAAGTACCCTGATAAGTTCAGCCAGGCCAGCAAGG...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGCCGAGTCTCTGCCCCTaGCCACACGGTTGGTCAATC +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTPSLCP*PHGWSI
Trigger: GATTGACCAACCGTGTGGTCAGGGGCAGAGACTCGG...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACACAGTCTGCAGGTGCATaGGGCAACTTGACAGGACAT +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTQSAGA*GNLTGH
Trigger: ATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTG...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTGCCCGTCCCTGCCCTTaGTGGACGAGAGAGACGCCC +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESARPCP*WTRETP
Trigger: GGGCGTCTCTCTCGTCCAGCAAGGGCAGGGACGGGC...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATTTCTTGCCGATGGGCTaGTCCAAGCACACACTCTCA +
Preference number: 4 (lower is better)
Translates to: PVSISHIISHLPRPLSPNFLPMG*SKHTLS
Trigger: TGAGAGTGTGTGCTTGGAGCAGCCCATCGGCAAGAA...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGTCTGAGATGATCCGGTaGTTCAGCTCCTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRSEMIR*FSSLFS
Trigger: GGAGAACAAGGAGCTGAAGCACCGGATCATCTCAGA...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGAGGGGATGGGGCAGTTaGCAGTGGCAAATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRRERGWGS*QWQIPE
Trigger: TTCAGGAATTTGCCACTGGCAACTGCCCCATCCCCT...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACAAAAGACGTGAAATATaGAGTCGGGGGCTCACGGCA +
Preference number: 4 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDKRREI*SRGLTA
Trigger: TGCCGTGAGCCCCCGACTGCATATTTCACGTCTTTT...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCCTTCAGTGTTCAAAGTaGAGTTGGAAATGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGLQCSK*SWKCQV
Trigger: CACCTGGCATTTCCAACTGCACTTTGAACACTGAAG...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACTCCAAAATTGTGGATTaGCAGGGTCCTCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDSKIVD*QGPLLP
Trigger: GGGGAGAAGAGGACCCTGGCAATCCACAATTTTGGA...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGTCCAAAATTGTGGATTaGCAGGGTCCTCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRSKIVD*QGPLLP
Trigger: GGGGAGAAGAGGACCCTGGCAATCCACAATTTTGGA...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGGGTCCCCATTTTGGCTaGAGCCAGCAAATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRGPHFG*SQQISK
Trigger: TTTGGAGATTTGCTGGCTGCAGCCAAAATGGGGACC...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGGACAGAGGTCGGCTTTaGTTTCAAACGCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLDRGRL*FQTHRP
Trigger: TGGCCTATGCGTTTGAAACCAAAGCCGACCTCTGTC...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACACTCGGAAGGGTCCTCTaGCCGCAATCATCTCATACA +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTLGRVL*PQSSHT
Trigger: TGTATGAGATGATTGCGGCCAGAGGACCCTTCCGAG...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATCTCGGAAGGGTCCTCTaGCCGCAATCATCTCATACA +
Preference number: 4 (lower is better)
Translates to: PVSISHIISHLPRPLSPNLGRVL*PQSSHT
Trigger: TGTATGAGATGATTGCGGCCAGAGGACCCTTCCGAG...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGAAGTCCTTGCTGGCCTaGCTGAACTTATCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLKSLLA*LNLSGY
Trigger: GTACCCTGATAAGTTCAGCCAGGCCAGCAAGGACTT...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGGACACATCCCTGACTTaGACGAGGAGCTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTDTSLT*TRSWSP
Trigger: GGGGCTCCAGCTCCTCGTCCAAGTCAGGGATGTGTC...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGTATGCACAAGGCCCGTaGCCTGAAGTGTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTYAQGP*PEVSPG
Trigger: CCCAGGGGACACTTCAGGCCACGGGCCTTGTGCATA...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACGTTGGGTCCCCATTTTaGCTGCAGCCAGCAAATCTC +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDVGSPF*LQPANL
Trigger: GAGATTTGCTGGCTGCAGCCAAAATGGGGACCCAAC...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACCACATAGGAGGGAGTTaGGTCCCCATTTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDHIGGS*VPILAA
Trigger: TGCAGCCAAAATGGGGACCCAACTCCCTCCTATGTG...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACACACATAGGAGGGAGTTaGGTCCCCATTTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTHIGGS*VPILAA
Trigger: TGCAGCCAAAATGGGGACCCAACTCCCTCCTATGTG...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGCCTCACCCAGGGGCGTaGCCTATCTTCCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTPHPGA*PIFPPE
Trigger: TTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGG...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACATGGAGCAAAAGACGTaGAATATGCAGTCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDMEQKT*NMQSGA
Trigger: AGCCCCCGACTGCATATTTCACGTCTTTTGCTCCAT...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAATGGAGCAAAAGACGTaGAATATGCAGTCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTMEQKT*NMQSGA
Trigger: AGCCCCCGACTGCATATTTCACGTCTTTTGCTCCAT...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAGATGTGGAGTTCTGTTaGGATCTGTGGGAAGACGTG +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTDVEFC*DLWEDV
Trigger: CACGTCTTCCCACAGATCTCAACAGAACTCCACATC...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATCTGGAGGTCATTGTCTaGCGTGTCATAGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: PVSISHIISHLPRPLSPNLEVIV*RVIVLD
Trigger: ATCGAGGACTATGACACGGCAGACAATGACCTCCAG...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGTTGGTCAATCACCAATaGAGGAGGCTCCCTAAGAGT +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRLVNHQ*RRLPKS
Trigger: ACTCTTAGGGAGCCTCCTGCATTGGTGATTGACCAA...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGAAGTGCAGTTGGAAATaGCAGGTGCATTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRREKCSWK*QVHCGW
Trigger: CCACCCACAATGCACCTGGCATTTCCAACTGCACTT...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGACTTCAGTGTTCAAAGTaGAGTTGGAAATGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGLQCSK*SWKCQV
Trigger: CACCTGGCATTTCCAACTGCACTTTGAACACTGAAG...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGTGTCCTGGAGGCAGTTaGAACAGAACTAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRCPGGS*NRTNFL
Trigger: CAGGAAGTTAGTTCTGTTGCAACTGCCTCCAGGACA...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATTCCAAAATTGTGGATTaGCAGGGTCCTCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PVSISHIISHLPRPLSPNSKIVD*QGPLLP
Trigger: GGGGAGAAGAGGACCCTGGCAATCCACAATTTTGGA...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGGGTCCCCATTTTGGCTaGAGCCAGCAAATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRREGPHFG*SQQISK
Trigger: TTTGGAGATTTGCTGGCTGCAGCCAAAATGGGGACC...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACGAGAGAGACGCCCTaGCCCTGTCGAGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEATRETP*PCRGFL
Trigger: CAGGAACCCTCGACAGGGCCAGGGCGTCTCTCTCGT...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTTGGGGGTCCAGGTACTaGGCCAGGATGGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESWGSRY*ARMVWA
Trigger: GGCCCAGACCATCCTGGCCCAGTACCTGGACCCCCA...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAGACAGTTTTGGAGTCTaGGATGAAAGGGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTDSFGV*DERGHQ
Trigger: CTGATGCCCCCTTTCATCCCAGACTCCAAAACTGTC...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACCAGCATGTGCGTCTaGCGGCTCAGGCCGATGTGG +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEATSMCV*RLRPMW
Trigger: CCACATCGGCCTGAGCCGCCAGACGCACATGCTGGT...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACACAATGGCTAAGGTCTTaGGAGGCCAAAACCGAGTCT +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTQWLRS*EAKTES
Trigger: AGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGGAGAGCAAACGGTCCTaGCTTTGCCCGCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTESKRS*LCPPRA
Trigger: TGCTCTTGGCGGGCAAAGCCAGGACCGTTTGCTCTC...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCAAATCTCCAAAATTGTaGATTGCCAGGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGKSPKL*IARVLF
Trigger: GAAGAGGACCCTGGCAATCCACAATTTTGGAGATTT...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
3UTR CAA 72 bp TCAGTGTTCAAAGTGCAGTTGGAAATGCCAGGTGCATaGTGGGTGGGGCCGAGCTGTATGAGAAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SVFKVQLEMPGA*WVGPSCMRRWA
Trigger: AGCCCACCTTCTCATACAGCTCGGCCCCACCCACAATGCACCTGGCATTTCCAACTGCACTTTGAACACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATGATTGTAGGAACTGCTaGAAGAGCTTCTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: PVSISHIISHLPRPLSPNDCRNC*KSFLPM
Trigger: CATCGGCAAGAAGCTCTTTCAGCAGTTCCTACAATC...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGTCAGGAAGTACAGGCTaGCCAGGTACTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTSGSTG*PGTPGR
Trigger: CCTTCCAGGAGTACCTGGGCAGCCTGTACTTCCTGA...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGAGTCCTGAATATCCTTTaGGTAGACAGTTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGVLNIL*VDSFGV
Trigger: GACTCCAAAACTGTCTACGCAAAGGATATTCAGGAC...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGTGGGGCAGTTGCCAGTaGCAAATTCCTGAAAGAATT +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRWGSCQ*QIPERI
Trigger: AATTCTTTCAGGAATTTGCCACTGGCAACTGCCCCA...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGTGGGGCAGTTGCCAGTaGCAAATTCCTGAAAGAATT +
Preference number: 4 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLWGSCQ*QIPERI
Trigger: AATTCTTTCAGGAATTTGCCACTGGCAACTGCCCCA...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTACTTGGACGAGGAGCTaGAGCCCCCGGAGATGCCCT +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESTWTRS*SPRRCP
Trigger: AGGGCATCTCCGGGGGCTCCAGCTCCTCGTCCAAGT...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTTGGGCCGCAAGGAGATaGCGTGATGGGGACCTGGGT +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESWAARR*RDGDLG
Trigger: ACCCAGGTCCCCATCACGCCATCTCCTTGCGGCCCA...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTCGGCTCAGGCCGATGTaGGCTTTCTCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESRLRPM*AFSSLG
Trigger: GCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCG...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACTTGGCTTACTCCCTCTaGAGAGCATCTTATGTCTTC +
Preference number: 4 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDLAYSL*RASYVF
Trigger: GAAGACATAAGATGCTCTCCAGAGGGAGTAAGCCAA...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTGAGTGCAGGGGACCATaGTGCCCCAGTGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESECRGP*CPSVQR
Trigger: CCTCTGCACACTGGGGCACCATGGTCCCCTGCACTC...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGATGTTCAAAGTGCAGTTaGAAATGCCAGGTGCATTGT +
Preference number: 4 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGCSKCS*KCQVHC
Trigger: ACAATGCACCTGGCATTTCCAACTGCACTTTGAACA...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCAGGCTTCTTCTCCCACTaGTACAACAGTGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEAGFFSH*YNSGRG
Trigger: GCCCCGGCCACTGTTGTACCAGTGGGAGAAGAAGCC...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGCCAGTGGCAAATTCCTaGAAGAATTCTGTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLPVANS*KNSVSV
Trigger: AACAGACACAGAATTCTTTCAGGAATTTGCCACTGG...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGCCAGTGGCAAATTCCTaGAAGAATTCTGTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRPVANS*KNSVSV
Trigger: AACAGACACAGAATTCTTTCAGGAATTTGCCACTGG...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACCTTATGTCTTCTCAGTaGGATGGAGCAAAAGACGTG +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDLMSSQ*DGAKDV
Trigger: CACGTCTTTTGCTCCATCTCACTGAGAAGACATAAG...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTGACCCCAAGATGCACTaGGACCCCCAGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESDPKMH*DPQTPH
Trigger: GTGTGGAGTCTGGGGGTCTCAGTGCATCTTGGGGTC...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGAGGGGATGGGGCAGTTaGCAGTGGCAAATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTRGWGS*QWQIPE
Trigger: TTCAGGAATTTGCCACTGGCAACTGCCCCATCCCCT...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCATCGATCATCTCCTCCTaGCAGGGGATGGGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEASIISS*QGMGQL
Trigger: CAACTGCCCCATCCCCTGGCAGGAGGAGATGATCGA...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTCAGGGGTGGGAACTTTaGACCAGCTGCCGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESQGWEL*TSCRQL
Trigger: CAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTG...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATTGGGGCAGTTGCCAGTaGCAAATTCCTGAAAGAATT +
Preference number: 4 (lower is better)
Translates to: PVSISHIISHLPRPLSPNWGSCQ*QIPERI
Trigger: AATTCTTTCAGGAATTTGCCACTGGCAACTGCCCCA...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCACCCCATCGAGCCGTATaGGTCCTTTTCCTCCACGTG +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEAPHRAV*VLFLHV
Trigger: CACGTGGAGGAAAAGGACCCATACGGCTCGATGGGG...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGAGCTGTATGAGAAGGTaGGCTGTGAGTGTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTSCMRR*AVSVFP
Trigger: CGGGAAGACACTCACAGCCCACCTTCTCATACAGCT...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGTGTTCAAAGTGCAGTTaGAAATGCCAGGTGCATTGT +
Preference number: 4 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLCSKCS*KCQVHC
Trigger: ACAATGCACCTGGCATTTCCAACTGCACTTTGAACA...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCACCCCGTGACCACATGTaGCAGGGTCAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEAPRDHM*QGQASS
Trigger: AGAAGAAGCCTGACCCTGCCACATGTGGTCACGGGG...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGCACATAGGAGGGAGTTaGGTCCCCATTTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTHIGGS*VPILAA
Trigger: TGCAGCCAAAATGGGGACCCAACTCCCTCCTATGTG...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCACTTTCCCTAGGACCCTaGAGTCCAGGAACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEALSLGP*SPGTSP
Trigger: AGGACTGGTTCCTGGACTTCAGGGTCCTAGGGAAAG...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTCGTAGCCCTTGGTCTTaGTCTGTCCGTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESRSPWS*SVRPAA
Trigger: AGCTGCTGGACGGACAGAGCAAGACCAAGGGCTACG...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACGTCCTGAATATCCTTTaGGTAGACAGTTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDVLNIL*VDSFGV
Trigger: GACTCCAAAACTGTCTACGCAAAGGATATTCAGGAC...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTGTTGGAAATGCCAGGTaGATTGTGGGTGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESVGNAR*IVGGAE
Trigger: CTCGGCCCCACCCACAATGCACCTGGCATTTCCAAC...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGAAGTCCTTGCTGGCCTaGCTGAACTTATCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTKSLLA*LNLSGY
Trigger: GTACCCTGATAAGTTCAGCCAGGCCAGCAAGGACTT...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGTGTTCAAAGTGCAGTTaGAAATGCCAGGTGCATTGT +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRRECSKCS*KCQVHC
Trigger: ACAATGCACCTGGCATTTCCAACTGCACTTTGAACA...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTCCCCGTGACCACATGTaGCAGGGTCAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESPRDHM*QGQASS
Trigger: AGAAGAAGCCTGACCCTGCCACATGTGGTCACGGGG...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACAAATCTCCAAAATTGTaGATTGCCAGGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDKSPKL*IARVLF
Trigger: GAAGAGGACCCTGGCAATCCACAATTTTGGAGATTT...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTCAAAGGCCACACCTTTaGCGGTGGAAAAGGCACCCA +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESQRPHL*RWKRHP
Trigger: TGGGTGCCTTTTCCACCGTCAAAGGTGTGGCCTTTG...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCATTCTTGCCGATGGGCTaGTCCAAGCACACACTCTCA +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEAFLPMG*SKHTLS
Trigger: TGAGAGTGTGTGCTTGGAGCAGCCCATCGGCAAGAA...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGTTCCCAAGAACAGTCTaGAGGTGCATGAGGCAACTT +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTFPRTV*RCMRQL
Trigger: AAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAGTCTTCTCAGTGAGATaGAGCAAAAGACGTGAAATA +
Preference number: 4 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTVFSVR*SKRREI
Trigger: TATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CCA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGGTCTTCTCAGTGAGATaGAGCAAAAGACGTGAAATA +
Preference number: 4 (lower is better)
Translates to: PGAWPIFPPEALKPHRREVFSVR*SKRREI
Trigger: TATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCATGTCACCTCCGTTCATaGTGGTCATCACCAGACAGA +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEACHLRS*WSSPDR
Trigger: TCTGTCTGGTGATGACCATCATGAACGGAGGTGACA...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTCAGTCTGCAGGTGCATaGGGCAACTTGACAGGACAT +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESQSAGA*GNLTGH
Trigger: ATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTG...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCACTGGAGGTCATTGTCTaGCGTGTCATAGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEALEVIV*RVIVLD
Trigger: ATCGAGGACTATGACACGGCAGACAATGACCTCCAG...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCATCTGAGATGATCCGGTaGTTCAGCTCCTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEASEMIR*FSSLFS
Trigger: GGAGAACAAGGAGCTGAAGCACCGGATCATCTCAGA...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTTCAGCTCGCCAAAGATaGCCGTCTCGATCATCTCCT +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESSARQR*PSRSSP
Trigger: AGGAGATGATCGAGACGGGCATCTTTGGCGAGCTGA...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCAAAGTGCAGTTGGAAATaGCAGGTGCATTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEAKCSWK*QVHCGW
Trigger: CCACCCACAATGCACCTGGCATTTCCAACTGCACTT...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCAGGTCCCCATTTTGGCTaGAGCCAGCAAATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEAGPHFG*SQQISK
Trigger: TTTGGAGATTTGCTGGCTGCAGCCAAAATGGGGACC...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTCTCGGAAGGGTCCTCTaGCCGCAATCATCTCATACA +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESLGRVL*PQSSHT
Trigger: TGTATGAGATGATTGCGGCCAGAGGACCCTTCCGAG...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCAAAGTCCTTGCTGGCCTaGCTGAACTTATCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEAKSLLA*LNLSGY
Trigger: GTACCCTGATAAGTTCAGCCAGGCCAGCAAGGACTT...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTAGGCCAGAGACACGATaGACCTGCTGTGTACTTTCA +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESRPETR*TCCVLS
Trigger: TGAAAGTACACAGCAGGTTCATCGTGTCTCTGGCCT...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGGTCCTGAATATCCTTTaGGTAGACAGTTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: VFSVRWSKRREICSRGLTVLNIL*VDSFGV
Trigger: GACTCCAAAACTGTCTACGCAAAGGATATTCAGGAC...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR GCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTAGAACAGTCTGCAGGTaGATGAGGCAACTTGACAGG +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESRTVCR*MRQLDR
Trigger: CCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCT...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCATTTGCAGTCCAGGTTTaGTTCCCAAGAACAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEAFAVQV*FPRTVC
Trigger: GCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAA...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR TCA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCACTTATGTCTTCTCAGTaGGATGGAGCAAAAGACGTG +
Preference number: 4 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEALMSSQ*DGAKDV
Trigger: CACGTCTTTTGCTCCATCTCACTGAGAAGACATAAG...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR GCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTTTCCCAAGAACAGTCTaGAGGTGCATGAGGCAACTT +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESFPRTV*RCMRQL
Trigger: AAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
3UTR CAA 72 bp ACCAATGCAGGAGGCTCCCTAAGAGTTTGTAGATTTTaGGCTTACTCCCTCTGGAGAGCATCTTATGTCTTC +
Preference number: 4 (lower is better)
Translates to: TNAGGSLRVCRF*AYSLWRASYVF
Trigger: GAAGACATAAGATGCTCTCCAGAGGGAGTAAGCCAAAAATCTACAAACTCTTAGGGAGCCTCCTGCATTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR TCA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTCCAGTGGCAAATTCCTaGAAGAATTCTGTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESPVANS*KNSVSV
Trigger: AACAGACACAGAATTCTTTCAGGAATTTGCCACTGG...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS GCA 90 bp AGCAGGCCTGACTGCTGCCCTTGGCCTGTGGCCCGTCCCTGCCCTTaGTGGACGAGAGAGACGCCCTGGCCCTGTCGAGGGTTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: SRPDCCPWPVARPCP*WTRETPWPCRGFLG
Trigger: CCCCAGGAACCCTCGACAGGGCCAGGGCGTCTCTCTCGTCCAGCAAGGGCAGGGACGGGCCACAGGCCAAGGGCAGCAGTCAGGCCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS GCA 90 bp CCGATGGCCAGGCACAGCCGGTCACAGACATCACTCTCCTCTCGGTaGACCGACCCTGACCCGGCTGGCCCATGCTGGCCCCCAGACGGC +
Preference number: 5 (lower is better)
Translates to: PMARHSRSQTSLSSR*TDPDPAGPCWPPDG
Trigger: GCCGTCTGGGGGCCAGCATGGGCCAGCCGGGTCAGGGTCGGTGCACCGAGAGGAGAGTGATGTCTGTGACCGGCTGTGCCTGGCCATCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000606140.1
ENST00000633694.1
ENST00000672964.1
CDS CCA 90 bp AGGCCTGACTGCTGCCCTTGGCCTGTGGCCCGTCCCTGCCCTTGCTaGACGAGAGAGACGCCCTGGCCCTGTCGAGGGTTCCTGGGGACC +
Preference number: 5 (lower is better)
Translates to: RPDCCPWPVARPCPC*TRETPWPCRGFLGT
Trigger: GGTCCCCAGGAACCCTCGACAGGGCCAGGGCGTCTCTCTCGTCCAGCAAGGGCAGGGACGGGCCACAGGCCAAGGGCAGCAGTCAGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS TCA 90 bp CGCGGTAGACGATCCGCCTCTGGTGCAGGTGCTCCAGGCCGCAGATaGTCTGCGCCGTGTAGAAGAGGGCGCGCGGCTCCGGGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: RGRRSASGAGAPGRR*SAPCRRGRAAPGSQ
Trigger: CTGGCTTCCCGGAGCCGCGCGCCCTCTTCTACACGGCGCAGATCATCTGCGGCCTGGAGCACCTGCACCAGAGGCGGATCGTCTACCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS GCA 90 bp AGGTACTCCTGGAAGGGGGCTTGGCCCAGGTGTGCCAGGGTGGCCTaGAGCAGGGGCTGGAAGAGCCCGTCCTGGATCTCCACAGGCCCC +
Preference number: 5 (lower is better)
Translates to: RYSWKGAWPRCARVA*SRGWKSPSWISTGP
Trigger: GGGGCCTGTGGAGATCCAGGACGGGCTCTTCCAGCCCCTGCTGCAGGCCACCCTGGCACACCTGGGCCAAGCCCCCTTCCAGGAGTACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS GCA 90 bp AGCCGAGGCCAAGCCGGGAGCGTTCACAGACAGAGCAGGCCTGACTaGTGCCCTTGGCCTGTGGCCCGTCCCTGCCCTTGCTGGACGAGA +
Preference number: 5 (lower is better)
Translates to: SRGQAGSVHRQSRPD*CPWPVARPCPCWTR
Trigger: TCTCGTCCAGCAAGGGCAGGGACGGGCCACAGGCCAAGGGCAGCAGTCAGGCCTGCTCTGTCTGTGAACGCTCCCGGCTTGGCCTCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS CCA 90 bp GGAGCGTTCACAGACAGAGCAGGCCTGACTGCTGCCCTTGGCCTGTaGCCCGTCCCTGCCCTTGCTGGACGAGAGAGACGCCCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: GAFTDRAGLTAALGL*PVPALAGRERRPGP
Trigger: AGGGCCAGGGCGTCTCTCTCGTCCAGCAAGGGCAGGGACGGGCCACAGGCCAAGGGCAGCAGTCAGGCCTGCTCTGTCTGTGAACGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS CCA 90 bp CAAGCCGGGAGCGTTCACAGACAGAGCAGGCCTGACTGCTGCCCTTaGCCTGTGGCCCGTCCCTGCCCTTGCTGGACGAGAGAGACGCCC +
Preference number: 5 (lower is better)
Translates to: QAGSVHRQSRPDCCP*PVARPCPCWTRETP
Trigger: GGGCGTCTCTCTCGTCCAGCAAGGGCAGGGACGGGCCACAGGCCAAGGGCAGCAGTCAGGCCTGCTCTGTCTGTGAACGCTCCCGGCTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGCACATCATCAGCCACTaGCCGCGGCCCCTCTCACCA +
Preference number: 5 (lower is better)
Translates to: DLATVHLPLRSVALGSQWHIISH*PRPLSP
Trigger: TGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTG...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCCACATCATCAGCCACTaGCCGCGGCCCCTCTCACCA +
Preference number: 5 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSHIISH*PRPLSP
Trigger: TGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTG...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS TCA 90 bp GAGGAGCTGGAGCCCCCGGAGATGCCCTTCATGTCGTCCGGCATCTaGCCGTCCGAGCGCCACACGTTCAGCTCGCCAAAGATGCCCGTC +
Preference number: 5 (lower is better)
Translates to: EELEPPEMPFMSSGI*PSERHTFSSPKMPV
Trigger: GACGGGCATCTTTGGCGAGCTGAACGTGTGGCGCTCGGACGGTCAGATGCCGGACGACATGAAGGGCATCTCCGGGGGCTCCAGCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000335678.7
ENST00000606140.1
ENST00000631997.1
ENST00000633694.1
ENST00000672946.1
ENST00000672964.1
CDS CCA 90 bp GGGGGCAGCTTGAGCTTGGCCAGGTACTTCTTGTCCCGGGAGGGTTaGGAGCTGCTGCCGTCAAAGCTGCCTCGGGCGGCGATGAAGGCA +
Preference number: 5 (lower is better)
Translates to: GGSLSLARYFLSREG*ELLPSKLPRAAMKA
Trigger: TGCCTTCATCGCCGCCCGAGGCAGCTTTGACGGCAGCAGCTCCCAACCCTCCCGGGACAAGAAGTACCTGGCCAAGCTCAAGCTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS CCA 90 bp AACCTCAGGAAGTACAGGCTGCCCAGGTACTCCTGGAAGGGGGCTTaGCCCAGGTGTGCCAGGGTGGCCTGCAGCAGGGGCTGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: NLRKYRLPRYSWKGA*PRCARVACSRGWKS
Trigger: GCTCTTCCAGCCCCTGCTGCAGGCCACCCTGGCACACCTGGGCCAAGCCCCCTTCCAGGAGTACCTGGGCAGCCTGTACTTCCTGAGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCCTCCAGTTAAGGTCCTaGAAGAGGGGGTGGGCACGG +
Preference number: 5 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSLQLRS*KRGWAR
Trigger: CCGTGCCCACCCCCTCTTCAAGGACCTTAACTGGAG...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCGAACCACGTGTCCCCTaGCTAGCAGACCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGEPRVP*LADPRL
Trigger: CAGCCTGGGGTCTGCTAGCAAGGGGACACGTGGTTC...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS TCA 90 bp CAAAGACCCGAAATCCATCCCGGAGCTTCCTGCCCGCTTCAGGCGTaGGGGCCCATCAGCCGAGGCCAAGCCGGGAGCGTTCACAGACAG +
Preference number: 5 (lower is better)
Translates to: QRPEIHPGASCPLQA*GPISRGQAGSVHRQ
Trigger: CTGTCTGTGAACGCTCCCGGCTTGGCCTCGGCTGATGGGCCCTCACGCCTGAAGCGGGCAGGAAGCTCCGGGATGGATTTCGGGTCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS GCA 90 bp CCAGACACATCCCTGACTTGGACGAGGAGCTGGAGCCCCCGGAGATaGCCTTCATGTCGTCCGGCATCTGACCGTCCGAGCGCCACACGT +
Preference number: 5 (lower is better)
Translates to: PDTSLTWTRSWSPRR*PSCRPASDRPSATR
Trigger: ACGTGTGGCGCTCGGACGGTCAGATGCCGGACGACATGAAGGGCATCTCCGGGGGCTCCAGCTCCTCGTCCAAGTCAGGGATGTGTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000335678.7
ENST00000606140.1
ENST00000631997.1
ENST00000633694.1
ENST00000672946.1
ENST00000672964.1
CDS CCA 90 bp TTCCACTGCAGGAACCTCAGGAAGTACAGGCTGCCCAGGTACTCCTaGAAGGGGGCTTGGCCCAGGTGTGCCAGGGTGGCCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: FHCRNLRKYRLPRYS*KGAWPRCARVACSR
Trigger: CCTGCTGCAGGCCACCCTGGCACACCTGGGCCAAGCCCCCTTCCAGGAGTACCTGGGCAGCCTGTACTTCCTGAGGTTCCTGCAGTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCTTGCAGGCATACAGCTaGCCGGTCGCCTTCATCTGG +
Preference number: 5 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSLQAYS*PVAFIW
Trigger: CCAGATGAAGGCGACCGGCAAGCTGTATGCCTGCAA...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCGCCTCGCAGAAGTCCTaGCTGGCCTGGCTGAACTTA +
Preference number: 5 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSASQKS*LAWLNL
Trigger: TAAGTTCAGCCAGGCCAGCAAGGACTTCTGCGAGGC...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp AGTCGGGGGCTCACGGCACCAGCATGTGCGTCTGGCGGCTCAGGCCGATGTGGGCCAATGGCTAAGGTCTaGGGAGGCCAAAACCGAGTC +
Preference number: 5 (lower is better)
Translates to: SRGLTAPACASGGSGRCGPMAKV*GGQNRV
Trigger: GACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGG...CCCACATCGGCCTGAGCCGCCAGACGCACATGCTGGTGCCGTGAGCCCCCGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS TCA 90 bp GGGAGGGTTGGGAGCTGCTGCCGTCAAAGCTGCCTCGGGCGGCGATaGAGGCAGAGTTGGCCACCACGGTCTCCAAAGACCCGAAATCCA +
Preference number: 5 (lower is better)
Translates to: GRVGSCCRQSCLGRR*RQSWPPRSPKTRNP
Trigger: TGGATTTCGGGTCTTTGGAGACCGTGGTGGCCAACTCTGCCTTCATCGCCGCCCGAGGCAGCTTTGACGGCAGCAGCTCCCAACCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACGGCCCGTCCCTGCCCTaGCTGGACGAGAGAGACGCC +
Preference number: 5 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDGPSLP*LDERDA
Trigger: GGCGTCTCTCTCGTCCAGCAAGGGCAGGGACGGGCC...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGGGCCCGTCCCTGCCCTaGCTGGACGAGAGAGACGCC +
Preference number: 5 (lower is better)
Translates to: PGAWPIFPPEALKPHRREGPSLP*LDERDA
Trigger: GGCGTCTCTCTCGTCCAGCAAGGGCAGGGACGGGCC...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGACGGAGGGACTCACACTaGGACAGCGGGGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGRRDSH*DSGGSL
Trigger: CAAGCTGCCCCCGCTGTCCAAGTGTGAGTCCCTCCG...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCAAGCTGCAGAAGAGTTaGGCCTGGGGGTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVKLQKS*AWGSRY
Trigger: GTACCTGGACCCCCAGGCCAAACTCTTCTGCAGCTT...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCCGGTGCTTCAGCTCCTaGTTCTCCACCTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSRCFSS*FSTFSP
Trigger: TGGAGAGAAGGTGGAGAACAAGGAGCTGAAGCACCG...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp CTGGCGGCTCAGGCCGATGTGGGCTTTCTCCTCCTTGGGCCGCAAGGAGATGGCCCCCTGACCACACGGTaGGTCAATCACCAATGCAGG +
Preference number: 5 (lower is better)
Translates to: LAAQADVGFLLLGPQGDGPLTTR*VNHQCR
Trigger: CCTGCATTGGTGATTGACCAACCGTGTGGTCAGGGG...GCCATCTCCTTGCGGCCCAAGGAGGAGAAAGCCCACATCGGCCTGAGCCGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCCCAATGGCTAAGGTCTaGGGAGGCCAAAACCGAGTC +
Preference number: 5 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSPMAKV*GGQNRV
Trigger: GACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGG...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCCTGCTTCCCTGCGGCTaGGATGCACTCCCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTLLPCG*DALPLS
Trigger: GCTCAGAGGGAGTGCATCCAAGCCGCAGGGAAGCAG...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS TCA 90 bp TCTTGCCGATGGGCTGCTCCAAGCACACACTCTCAAACTCCAGGCTaGGGCTGTCGCGGAGGGACTCACACTTGGACAGCGGGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: SCRWAAPSTHSQTPG*GCRGGTHTWTAGAA
Trigger: AGCTGCCCCCGCTGTCCAAGTGTGAGTCCCTCCGCGACAGCCTCAGCCTGGAGTTTGAGAGTGTGTGCTTGGAGCAGCCCATCGGCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGCGGAGGGACTCACACTaGGACAGCGGGGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLRRDSH*DSGGSL
Trigger: CAAGCTGCCCCCGCTGTCCAAGTGTGAGTCCCTCCG...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp GACCTGGCCACCGTGCACCTCCCGCTGAGGAGCGTGGCTCTGGGAAGCCAATGGCTCCAAAATTGTGGATaGCCAGGGTCCTCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: DLATVHLPLRSVALGSQWLQNCG*PGSSSP
Trigger: GGGAGAAGAGGACCCTGGCAATCCACAATTTTGGAG...CCATTGGCTTCCCAGAGCCACGCTCCTCAGCGGGAGGTGCACGGTGGCCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS TCA 90 bp CACGGGCTCGGAAGGGTCCTCTGGCCGCAATCATCTCATACAGGGTaGCCCCCAGGGCAAAGTAGTCCACGGAGAAGTCGTACTCCTCGC +
Preference number: 5 (lower is better)
Translates to: HGLGRVLWPQSSHTG*PPGQSSPRRSRTPR
Trigger: GCGAGGAGTACGACTTCTCCGTGGACTACTTTGCCCTGGGGGTCACCCTGTATGAGATGATTGCGGCCAGAGGACCCTTCCGAGCCCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000335678.7
ENST00000545304.1
ENST00000631997.1
ENST00000633083.1
ENST00000672546.1
ENST00000672946.1
CDS TCA 90 bp TCCACGTGGACTCTGGGGCGTCACCTAGGAAACCAGACACATCCCTaGCTTGGACGAGGAGCTGGAGCCCCCGGAGATGCCCTTCATGTC +
Preference number: 5 (lower is better)
Translates to: STWTLGRHLGNQTHP*LGRGAGAPGDALHV
Trigger: GACATGAAGGGCATCTCCGGGGGCTCCAGCTCCTCGTCCAAGTCAGGGATGTGTCTGGTTTCCTAGGTGACGCCCCAGAGTCCACGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335678.7
ENST00000606140.1
ENST00000631997.1
ENST00000633694.1
ENST00000672946.1
ENST00000672964.1
CDS GCA 90 bp CTGGGCCAGGATGGTCTGGGCCTTCTGTGGCTGGAGGTCATTGTCTaGCGTGTCATAGTCCTCGATGTCTTTCCAGAGCTCCAGGGCCGG +
Preference number: 5 (lower is better)
Translates to: LGQDGLGLLWLEVIV*RVIVLDVFPELQGR
Trigger: CCGGCCCTGGAGCTCTGGAAAGACATCGAGGACTATGACACGGCAGACAATGACCTCCAGCCACAGAAGGCCCAGACCATCCTGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACGACAGCGGGGGCAGCTaGAGCTTGGCCAGGTACTTC +
Preference number: 5 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDDSGGS*SLARYF
Trigger: GAAGTACCTGGCCAAGCTCAAGCTGCCCCCGCTGTC...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCTTGCAGGCATACAGCTaGCCGGTCGCCTTCATCTGG +
Preference number: 5 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTLQAYS*PVAFIW
Trigger: CCAGATGAAGGCGACCGGCAAGCTGTATGCCTGCAA...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCCGGACATTGCCGTCATaGTCCAGCAGCACGTTCTCG +
Preference number: 5 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTRTLPS*SSSTFS
Trigger: CGAGAACGTGCTGCTGGACAATGACGGCAATGTCCG...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGGAACCACGTGTCCCCTaGCTAGCAGACCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QWLRSWEAKTESLPLTTREPRVP*LADPRL
Trigger: CAGCCTGGGGTCTGCTAGCAAGGGGACACGTGGTTC...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGATCAGGGGTGGGAACTTaGCACCAGCTGCCGTCAGCT +
Preference number: 5 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGSGVGT*HQLPSA
Trigger: AGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGA...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGAGAAATGCCAGGTGCATaGTGGGTGGGGCCGAGCTGT +
Preference number: 5 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGEMPGA*WVGPSC
Trigger: ACAGCTCGGCCCCACCCACAATGCACCTGGCATTTC...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGCTGCTTCCCTGCGGCTaGGATGCACTCCCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLLLPCG*DALPLS
Trigger: GCTCAGAGGGAGTGCATCCAAGCCGCAGGGAAGCAG...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCTGCTTCCCTGCGGCTaGGATGCACTCCCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDLLPCG*DALPLS
Trigger: GCTCAGAGGGAGTGCATCCAAGCCGCAGGGAAGCAG...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGCACATCATCAGCCACTaGCCGCGGCCCCTCTCACCA +
Preference number: 5 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRHIISH*PRPLSP
Trigger: TGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTG...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp CTGGCACCACGGAGGCAGGCGGCCCCCATCGAGCCGTATGGGTCCTTTTCCTCCCGATGTGGAGTTCTGTaGAGATCTGTGGGAAGACGT +
Preference number: 5 (lower is better)
Translates to: LAPRRQAAPIEPYGSFSSRCGVL*RSVGRR
Trigger: ACGTCTTCCCACAGATCTCAACAGAACTCCACATCG...GGAGGAAAAGGACCCATACGGCTCGATGGGGGCCGCCTGCCTCCGTGGTGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS CCA 90 bp GGCCTGGGGGTCCAGGTACTGGGCCAGGATGGTCTGGGCCTTCTGTaGCTGGAGGTCATTGTCTGCCGTGTCATAGTCCTCGATGTCTTT +
Preference number: 5 (lower is better)
Translates to: GLGVQVLGQDGLGLL*LEVIVCRVIVLDVF
Trigger: AAAGACATCGAGGACTATGACACGGCAGACAATGACCTCCAGCCACAGAAGGCCCAGACCATCCTGGCCCAGTACCTGGACCCCCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS CCA 90 bp AGCTGCAGAAGAGTTTGGCCTGGGGGTCCAGGTACTGGGCCAGGATaGTCTGGGCCTTCTGTGGCTGGAGGTCATTGTCTGCCGTGTCAT +
Preference number: 5 (lower is better)
Translates to: SCRRVWPGGPGTGPG*SGPSVAGGHCLPCH
Trigger: ATGACACGGCAGACAATGACCTCCAGCCACAGAAGGCCCAGACCATCCTGGCCCAGTACCTGGACCCCCAGGCCAAACTCTTCTGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS CCA 90 bp TTCCCTAGGACCCTGAAGTCCAGGAACCAGTCCTCCCCCATGGGCTaGGCTTCCAGCCACTTCCACTGCAGGAACCTCAGGAAGTACAGG +
Preference number: 5 (lower is better)
Translates to: FPRTLKSRNQSSPMG*ASSHFHCRNLRKYR
Trigger: CCTGTACTTCCTGAGGTTCCTGCAGTGGAAGTGGCTGGAAGCCCAGCCCATGGGGGAGGACTGGTTCCTGGACTTCAGGGTCCTAGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS CCA 90 bp TTGGAGCCTTCTTGTGAAAGGACCTGGCGCTCACATCTGCCTTGTTaGGAGCCTCCCCTAGGGTCTCGTCATGAAGCGGTCTCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: LEPSCERTWRSHLPC*EPPLGSRHEAVSSP
Trigger: CGGGGAGGAGACCGCTTCATGACGAGACCCTAGGGGAGGCTCCCAACAAGGCAGATGTGAGCGCCAGGTCCTTTCACAAGAAGGCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000606140.1
ENST00000633694.1
ENST00000672964.1
CDS-3UTR CAA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACGGGGGCAGCTTGAGCTaGGCCAGGTACTTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDGGSLS*ARYFLS
Trigger: GGACAAGAAGTACCTGGCCAAGCTCAAGCTGCCCCC...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATGGGTGGGCACGGAGCTaGTCGCAGGTCTCATCTCTG +
Preference number: 5 (lower is better)
Translates to: PVSISHIISHLPRPLSPNGWARS*SQVSSL
Trigger: CAGAGATGAGACCTGCGACAAGCTCCGTGCCCACCC...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAGGGTGGGCACGGAGCTaGTCGCAGGTCTCATCTCTG +
Preference number: 5 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTGWARS*SQVSSL
Trigger: CAGAGATGAGACCTGCGACAAGCTCCGTGCCCACCC...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACGGGTGGGCACGGAGCTaGTCGCAGGTCTCATCTCTG +
Preference number: 5 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDGWARS*SQVSSL
Trigger: CAGAGATGAGACCTGCGACAAGCTCCGTGCCCACCC...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGCTCCAGTTAAGGTCCTaGAAGAGGGGGTGGGCACGG +
Preference number: 5 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRLQLRS*KRGWAR
Trigger: CCGTGCCCACCCCCTCTTCAAGGACCTTAACTGGAG...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTCAAAGGCCACACCTTaGACGGTGGAAAAGGCACCC +
Preference number: 5 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGSKATP*TVEKAP
Trigger: GGGTGCCTTTTCCACCGTCAAAGGTGTGGCCTTTGA...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATGAACCACGTGTCCCCTaGCTAGCAGACCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PVSISHIISHLPRPLSPNEPRVP*LADPRL
Trigger: CAGCCTGGGGTCTGCTAGCAAGGGGACACGTGGTTC...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGACCCCTGACCACACGGTaGGTCAATCACCAATGCAGG +
Preference number: 5 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGPLTTR*VNHQCR
Trigger: CCTGCATTGGTGATTGACCAACCGTGTGGTCAGGGG...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGTCAGGGGTGGGAACTTaGCACCAGCTGCCGTCAGCT +
Preference number: 5 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLSGVGT*HQLPSA
Trigger: AGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGA...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGAGAACACAGAGAGGGGTaGCAGCAAGGAGCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGEHREG*QQGALS
Trigger: GGACAGAGCTCCTTGCTGCAACCCCTCTCTGTGTTC...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS CCA 90 bp TCATCCAGGAAGCTGCAGAAGAGTTTGGCCTGGGGGTCCAGGTACTaGGCCAGGATGGTCTGGGCCTTCTGTGGCTGGAGGTCATTGTCT +
Preference number: 5 (lower is better)
Translates to: SSRKLQKSLAWGSRY*ARMVWAFCGWRSLS
Trigger: AGACAATGACCTCCAGCCACAGAAGGCCCAGACCATCCTGGCCCAGTACCTGGACCCCCAGGCCAAACTCTTCTGCAGCTTCCTGGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGGCGATGAAGGCAGAGTaGGCCACCACGGTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLAMKAE*ATTVSK
Trigger: TTTGGAGACCGTGGTGGCCAACTCTGCCTTCATCGC...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGGGGGGCAGCTTGAGCTaGGCCAGGTACTTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: PGAWPIFPPEALKPHRREGGSLS*ARYFLS
Trigger: GGACAAGAAGTACCTGGCCAAGCTCAAGCTGCCCCC...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGCGGACATTGCCGTCATaGTCCAGCAGCACGTTCTCG +
Preference number: 5 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLRTLPS*SSSTFS
Trigger: CGAGAACGTGCTGCTGGACAATGACGGCAATGTCCG...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGGCCTCGCAGAAGTCCTaGCTGGCCTGGCTGAACTTA +
Preference number: 5 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLASQKS*LAWLNL
Trigger: TAAGTTCAGCCAGGCCAGCAAGGACTTCTGCGAGGC...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACACTCCAGTTAAGGTCCTaGAAGAGGGGGTGGGCACGG +
Preference number: 5 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTLQLRS*KRGWAR
Trigger: CCGTGCCCACCCCCTCTTCAAGGACCTTAACTGGAG...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACGAAATGCCAGGTGCATaGTGGGTGGGGCCGAGCTGT +
Preference number: 5 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDEMPGA*WVGPSC
Trigger: ACAGCTCGGCCCCACCCACAATGCACCTGGCATTTC...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCGTGTTCAAAGTGCAGTaGGAAATGCCAGGTGCATTG +
Preference number: 5 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVVFKVQ*EMPGAL
Trigger: CAATGCACCTGGCATTTCCAACTGCACTTTGAACAC...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp CGGTCCTGGCTTTGCCCGCCAAGAGCAGCTGAGGTGCTTCCGGGACTCAGGGTCAGCAAATCTCCAAAATaGTGGATTGCCAGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: RSWLCPPRAAEVLPGLRVSKSPK*WIARVL
Trigger: GAGGACCCTGGCAATCCACAATTTTGGAGATTTGCT...GACCCTGAGTCCCGGAAGCACCTCAGCTGCTCTTGGCGGGCAAAGCCAGGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS TCA 90 bp AGCTCCAGGGCCGGCAGGTGCTTCTCTGCCGATTGTAGGAACTGCTaGAAGAGCTTCTTGCCGATGGGCTGCTCCAAGCACACACTCTCA +
Preference number: 5 (lower is better)
Translates to: SSRAGRCFSADCRNC*KSFLPMGCSKHTLS
Trigger: TGAGAGTGTGTGCTTGGAGCAGCCCATCGGCAAGAAGCTCTTTCAGCAGTTCCTACAATCGGCAGAGAAGCACCTGCCGGCCCTGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS CCA 90 bp CCTGAGATCCCAGGGCTCATTTTGGAGCCTTCTTGTGAAAGGACCTaGCGCTCACATCTGCCTTGTTGGGAGCCTCCCCTAGGGTCTCGT +
Preference number: 5 (lower is better)
Translates to: PEIPGLILEPSCERT*RSHLPCWEPPLGSR
Trigger: ACGAGACCCTAGGGGAGGCTCCCAACAAGGCAGATGTGAGCGCCAGGTCCTTTCACAAGAAGGCTCCAAAATGAGCCCTGGGATCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000606140.1
ENST00000633694.1
ENST00000672964.1
CDS-3UTR CAA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACAGCGATGAAGGCAGAGTaGGCCACCACGGTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTAMKAE*ATTVSK
Trigger: TTTGGAGACCGTGGTGGCCAACTCTGCCTTCATCGC...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp CCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATAGGAGGGAGAAGCTGCAGAAGAGTTaGGCCTGGGGGTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: PGAWPIFPPEALKPHRREKLQKS*AWGSRY
Trigger: GTACCTGGACCCCCAGGCCAAACTCTTCTGCAGCTT...CTCCCTCCTATGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGCGGTGCTTCAGCTCCTaGTTCTCCACCTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRRCFSS*FSTFSP
Trigger: TGGAGAGAAGGTGGAGAACAAGGAGCTGAAGCACCG...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCGGTGCTTCAGCTCCTaGTTCTCCACCTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDRCFSS*FSTFSP
Trigger: TGGAGAGAAGGTGGAGAACAAGGAGCTGAAGCACCG...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATGCCTCGCAGAAGTCCTaGCTGGCCTGGCTGAACTTA +
Preference number: 5 (lower is better)
Translates to: PVSISHIISHLPRPLSPNASQKS*LAWLNL
Trigger: TAAGTTCAGCCAGGCCAGCAAGGACTTCTGCGAGGC...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACACCCCTGACCACACGGTaGGTCAATCACCAATGCAGG +
Preference number: 5 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTPLTTR*VNHQCR
Trigger: CCTGCATTGGTGATTGACCAACCGTGTGGTCAGGGG...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCCAATGGCTAAGGTCTaGGGAGGCCAAAACCGAGTC +
Preference number: 5 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDPMAKV*GGQNRV
Trigger: GACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGG...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATGAACACAGAGAGGGGTaGCAGCAAGGAGCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: PVSISHIISHLPRPLSPNEHREG*QQGALS
Trigger: GGACAGAGCTCCTTGCTGCAACCCCTCTCTGTGTTC...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCCGATGTGGAGTTCTGTaGAGATCTGTGGGAAGACGT +
Preference number: 5 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGRCGVL*RSVGRR
Trigger: ACGTCTTCCCACAGATCTCAACAGAACTCCACATCG...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS CCA 90 bp GGCTTGAGTGGGGCCGGAAGAAGCCTGAGATCCCAGGGCTCATTTTaGAGCCTTCTTGTGAAAGGACCTGGCGCTCACATCTGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: GLSGAGRSLRSQGSF*SLLVKGPGAHICLV
Trigger: AACAAGGCAGATGTGAGCGCCAGGTCCTTTCACAAGAAGGCTCCAAAATGAGCCCTGGGATCTCAGGCTTCTTCCGGCCCCACTCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000606140.1
ENST00000633694.1
ENST00000672964.1
CDS-3UTR CAA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATCAAAGGCCACACCTTaGACGGTGGAAAAGGCACCC +
Preference number: 5 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTSKATP*TVEKAP
Trigger: GGGTGCCTTTTCCACCGTCAAAGGTGTGGCCTTTGA...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGCTCCAAAATTGTGGATaGCCAGGGTCCTCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRLQNCG*PGSSSP
Trigger: GGGAGAAGAGGACCCTGGCAATCCACAATTTTGGAG...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp CCACCCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAGCAAATCTCCAAAATaGTGGATTGCCAGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: PPCLHQSHHQPLAAAPLTSKSPK*WIARVL
Trigger: GAGGACCCTGGCAATCCACAATTTTGGAGATTTGCT...GGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp GTGGGGCCGAGCTGTATGAGAAGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCCGTCCTGAATATCCTTaGCGTAGACAGTTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: VGPSCMRRWAVSVFPGYGRPEYP*RRQFWS
Trigger: ACTCCAAAACTGTCTACGCAAAGGATATTCAGGACG...GCCATAGCCCGGGAAGACACTCACAGCCCACCTTCTCATACAGCTCGGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGTCAGGGGTGGGAACTTaGCACCAGCTGCCGTCAGCT +
Preference number: 5 (lower is better)
Translates to: VFSVRWSKRREICSRGLTSGVGT*HQLPSA
Trigger: AGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGA...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp TCAGCTGGACACCCTGAGATAAGGAGACCCCAAGATGCACTGAGACCCCCAGACGCCGGGAGGTTTATTTaGCAGTCCAGGTTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: SAGHPEIRRPQDALRPPDAGRFI*QSRFAS
Trigger: GGAAGCAAACCTGGACTGCAAAATAAACCTCCCGGC...GTCTGGGGGTCTCAGTGCATCTTGGGGTCTCCTTATCTCAGGGTGTCCAGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp TTTCAGCTCCCCAGCTCAGGGGTGGGAACTTTGCACCAGCTGCCGTCAGCTGGACGTCCTGAATATCCTTaGCGTAGACAGTTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: FQLPSSGVGTLHQLPSAGRPEYP*RRQFWS
Trigger: ACTCCAAAACTGTCTACGCAAAGGATATTCAGGACG...TCCAGCTGACGGCAGCTGGTGCAAAGTTCCCACCCCTGAGCTGGGGAGCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp CCTCTTCTCCCCAACAGGAAGAGGACGACCTGGCAGCCTGAGGACTGTGAGGGCAGAGTTTGTAGATTTTaGGCTTACTCCCTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: PLLPNRKRTTWQPEDCEGRVCRF*AYSLWR
Trigger: TCTCCAGAGGGAGTAAGCCAAAAATCTACAAACTCT...GCCCTCACAGTCCTCAGGCTGCCAGGTCGTCCTCTTCCTGTTGGGGAGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACGTGTTCAAAGTGCAGTaGGAAATGCCAGGTGCATTG +
Preference number: 5 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDVFKVQ*EMPGAL
Trigger: CAATGCACCTGGCATTTCCAACTGCACTTTGAACAC...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp TGCTCCTCACCCAGGGGCGTGGCCTATCTTCCCTCCAGAAGCTCTAAAACCACATTTTGCAGTCCAGGTTaGCTTCCCAAGAACAGTCTG +
Preference number: 5 (lower is better)
Translates to: CSSPRGVAYLPSRSSKTTFCSPG*LPKNSL
Trigger: CAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAA...TGTGGTTTTAGAGCTTCTGGAGGGAAGATAGGCCACGCCCCTGGGTGAGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATTTTTGCAGTCCAGGTTaGCTTCCCAAGAACAGTCTG +
Preference number: 5 (lower is better)
Translates to: PVSISHIISHLPRPLSPNFCSPG*LPKNSL
Trigger: CAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAA...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTTTGGCCAGGTACTTCTaGTCCCGGGAGGGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESLARYF*SREGWE
Trigger: CTCCCAACCCTCCCGGGACAAGAAGTACCTGGCCAA...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp CCTGTCTCCATCAGTCACATCATCAGCCACTTGCCGCGGCCCCTCTCACCAAATCGTCCTGAATATCCTTaGCGTAGACAGTTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: PVSISHIISHLPRPLSPNRPEYP*RRQFWS
Trigger: ACTCCAAAACTGTCTACGCAAAGGATATTCAGGACG...ATTTGGTGAGAGGGGCCGCGGCAAGTGGCTGATGATGTGACTGATGGAGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp AGGTGGGCTGTGAGTGTCTTCCCGGGCTATGGCTTTAGGACTCCAGTGCTGCTGAATTCTGTGTCTGTTTaGTCAAAGGCCACACCTTTG +
Preference number: 5 (lower is better)
Translates to: RWAVSVFPGYGFRTPVLLNSVSV*SKATPL
Trigger: CAAAGGTGTGGCCTTTGACAAAACAGACACAGAATT...CAGCAGCACTGGAGTCCTAAAGCCATAGCCCGGGAAGACACTCACAGCCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACAATTCTGTGTCTGTTTaGTCAAAGGCCACACCTTTG +
Preference number: 5 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDNSVSV*SKATPL
Trigger: CAAAGGTGTGGCCTTTGACAAAACAGACACAGAATT...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp CAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACCACACGGAATTCTGTGTCTGTTTaGTCAAAGGCCACACCTTTG +
Preference number: 5 (lower is better)
Translates to: QWLRSWEAKTESLPLTTRNSVSV*SKATPL
Trigger: CAAAGGTGTGGCCTTTGACAAAACAGACACAGAATT...CCGTGTGGTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp GGGAAGCCAATGGCTAAGGTCTTGGGAGGCCAAAACCGAGTCTCTGCCCCTGACAGAGTTTGTAGATTTTaGGCTTACTCCCTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: GKPMAKVLGGQNRVSAPDRVCRF*AYSLWR
Trigger: TCTCCAGAGGGAGTAAGCCAAAAATCTACAAACTCT...GTCAGGGGCAGAGACTCGGTTTTGGCCTCCCAAGACCTTAGCCATTGGCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp TTATTTTGCAGTCCAGGTTTGCTTCCCAAGAACAGTCTGCAGGTGCATGAGGCATCAAAGGCCACACCTTaGACGGTGGAAAAGGCACCC +
Preference number: 5 (lower is better)
Translates to: LFCSPGLLPKNSLQVHEASKATP*TVEKAP
Trigger: GGGTGCCTTTTCCACCGTCAAAGGTGTGGCCTTTGA...TGCCTCATGCACCTGCAGACTGTTCTTGGGAAGCAAACCTGGACTGCAAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS-3UTR CAA 90 bp GTCTTCTCAGTGAGATGGAGCAAAAGACGTGAAATATGCAGTCGGGGGCTCACGGTGTTCAAAGTGCAGTaGGAAATGCCAGGTGCATTG +
Preference number: 5 (lower is better)
Translates to: VFSVRWSKRREICSRGLTVFKVQ*EMPGAL
Trigger: CAATGCACCTGGCATTTCCAACTGCACTTTGAACAC...CGTGAGCCCCCGACTGCATATTTCACGTCTTTTGCTCCATCTCACTGAGAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335678.7
ENST00000631997.1
ENST00000672946.1
CDS-3UTR CAA 90 bp TTCCCAAGAACAGTCTGCAGGTGCATGAGGCAACTTGACAGGACATATGAAAGTAGCAAATCTCCAAAATaGTGGATTGCCAGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: FPRTVCRCMRQLDRTYESSKSPK*WIARVL
Trigger: GAGGACCCTGGCAATCCACAATTTTGGAGATTTGCT...ACTTTCATATGTCCTGTCAAGTTGCCTCATGCACCTGCAGACTGTTCTTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS TCA 90 bp ATTCCTGAAAGAATTCTGTGTCTGTTTTGTCAAAGGCCACACCTTTaGCGGTGGAAAAGGCACCCACGTCCTGAATATCCTTTGCGTAGA +
Preference number: 5 (lower is better)
Translates to: IPERILCLFCQRPHL*RWKRHPRPEYPLRR
Trigger: TCTACGCAAAGGATATTCAGGACGTGGGTGCCTTTTCCACCGTCAAAGGTGTGGCCTTTGACAAAACAGACACAGAATTCTTTCAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335678.7
ENST00000545304.1
ENST00000606140.1
ENST00000631997.1
ENST00000633083.1
ENST00000633694.1
ENST00000672546.1
ENST00000672946.1
ENST00000672964.1
CDS GCA 72 bp TCCTCTCGGTGCACCGACCCTGACCCGGCTGGCCCATaGTGGCCCCCAGACGGCCTCTGTGACGGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: SSRCTDPDPAGP*WPPDGLCDGLR
Trigger: CCTGAGGCCGTCACAGAGGCCGTCTGGGGGCCAGCATGGGCCAGCCGGGTCAGGGTCGGTGCACCGAGAGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000606140.1
ENST00000633694.1
ENST00000672964.1
CDS CCA 72 bp TCTCGGTGCACCGACCCTGACCCGGCTGGCCCATGCTaGCCCCCAGACGGCCTCTGTGACGGCCTCAGGACC +
Preference number: 6 (lower is better)
Translates to: SRCTDPDPAGPC*PPDGLCDGLRT
Trigger: GGTCCTGAGGCCGTCACAGAGGCCGTCTGGGGGCCAGCATGGGCCAGCCGGGTCAGGGTCGGTGCACCGAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000606140.1
ENST00000633694.1
ENST00000672964.1
CDS TCA 72 bp CGATCCGCCTCTGGTGCAGGTGCTCCAGGCCGCAGATaGTCTGCGCCGTGTAGAAGAGGGCGCGCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: RSASGAGAPGRR*SAPCRRGRAAP
Trigger: CGGAGCCGCGCGCCCTCTTCTACACGGCGCAGATCATCTGCGGCCTGGAGCACCTGCACCAGAGGCGGATCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS TCA 72 bp GTCACAGACATCACTCTCCTCTCGGTGCACCGACCCTaGCCCGGCTGGCCCATGCTGGCCCCCAGACGGCCT +
Preference number: 6 (lower is better)
Translates to: VTDITLLSVHRP*PGWPMLAPRRP
Trigger: AGGCCGTCTGGGGGCCAGCATGGGCCAGCCGGGTCAGGGTCGGTGCACCGAGAGGAGAGTGATGTCTGTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000606140.1
ENST00000633694.1
ENST00000672964.1
CDS TCA 72 bp GAACTTGGCAGCTTCCTTCCAACCAGCGTCCCTCCCTaGCGCACCGGCCCCCGATGGCCAGGCACAGCCGGT +
Preference number: 6 (lower is better)
Translates to: ELGSFLPTSVPP*RTGPRWPGTAG
Trigger: ACCGGCTGTGCCTGGCCATCGGGGGCCGGTGCGTCAGGGAGGGACGCTGGTTGGAAGGAAGCTGCCAAGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000606140.1
ENST00000633694.1
ENST00000672964.1
CDS GCA 72 bp AGGCACAGCCGGTCACAGACATCACTCTCCTCTCGGTaGACCGACCCTGACCCGGCTGGCCCATGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: RHSRSQTSLSSR*TDPDPAGPCWP
Trigger: GGGCCAGCATGGGCCAGCCGGGTCAGGGTCGGTGCACCGAGAGGAGAGTGATGTCTGTGACCGGCTGTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000606140.1
ENST00000633694.1
ENST00000672964.1
CDS TCA 72 bp GAAATCCATCCCGGAGCTTCCTGCCCGCTTCAGGCGTaGGGGCCCATCAGCCGAGGCCAAGCCGGGAGCGTT +
Preference number: 6 (lower is better)
Translates to: EIHPGASCPLQA*GPISRGQAGSV
Trigger: AACGCTCCCGGCTTGGCCTCGGCTGATGGGCCCTCACGCCTGAAGCGGGCAGGAAGCTCCGGGATGGATTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS CCA 72 bp GCCCCCTCCCCCATGGCTCCCAGATGCACAAAGGCCTaGGGCCGCTCTTCCTTAGGGAAGTGTCGTGGAGGC +
Preference number: 6 (lower is better)
Translates to: APSPMAPRCTKA*GRSSLGKCRGG
Trigger: GCCTCCACGACACTTCCCTAAGGAAGAGCGGCCCCAGGCCTTTGTGCATCTGGGAGCCATGGGGGAGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000606140.1
ENST00000633694.1
ENST00000672964.1
CDS TCA 72 bp GGGAGCTGCTGCCGTCAAAGCTGCCTCGGGCGGCGATaGAGGCAGAGTTGGCCACCACGGTCTCCAAAGACC +
Preference number: 6 (lower is better)
Translates to: GSCCRQSCLGRR*RQSWPPRSPKT
Trigger: GGTCTTTGGAGACCGTGGTGGCCAACTCTGCCTTCATCGCCGCCCGAGGCAGCTTTGACGGCAGCAGCTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS TCA 72 bp GGGGGTGGGCACGGAGCTTGTCGCAGGTCTCATCTCTaGACCCCAGGCGCTTCTCCGGGTCCTTCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: GGGHGACRRSHL*TPGASPGPSPA
Trigger: TGCTGGAGAAGGACCCGGAGAAGCGCCTGGGGTTCAGAGATGAGACCTGCGACAAGCTCCGTGCCCACCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335678.7
ENST00000545304.1
ENST00000631997.1
ENST00000633083.1
ENST00000672546.1
ENST00000672946.1
CDS TCA 72 bp GAGCCCCCGGAGATGCCCTTCATGTCGTCCGGCATCTaGCCGTCCGAGCGCCACACGTTCAGCTCGCCAAAG +
Preference number: 6 (lower is better)
Translates to: EPPEMPFMSSGI*PSERHTFSSPK
Trigger: CTTTGGCGAGCTGAACGTGTGGCGCTCGGACGGTCAGATGCCGGACGACATGAAGGGCATCTCCGGGGGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000335678.7
ENST00000606140.1
ENST00000631997.1
ENST00000633694.1
ENST00000672946.1
ENST00000672964.1
CDS GCA 72 bp TCCCTGACTTGGACGAGGAGCTGGAGCCCCCGGAGATaGCCTTCATGTCGTCCGGCATCTGACCGTCCGAGC +
Preference number: 6 (lower is better)
Translates to: SLTWTRSWSPRR*PSCRPASDRPS
Trigger: GCTCGGACGGTCAGATGCCGGACGACATGAAGGGCATCTCCGGGGGCTCCAGCTCCTCGTCCAAGTCAGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000335678.7
ENST00000606140.1
ENST00000631997.1
ENST00000633694.1
ENST00000672946.1
ENST00000672964.1
CDS CCA 72 bp AGGAACCTCAGGAAGTACAGGCTGCCCAGGTACTCCTaGAAGGGGGCTTGGCCCAGGTGTGCCAGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: RNLRKYRLPRYS*KGAWPRCARVA
Trigger: GGCCACCCTGGCACACCTGGGCCAAGCCCCCTTCCAGGAGTACCTGGGCAGCCTGTACTTCCTGAGGTTCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS CCA 72 bp TTGGCCTGGGGGTCCAGGTACTGGGCCAGGATGGTCTaGGCCTTCTGTGGCTGGAGGTCATTGTCTGCCGTG +
Preference number: 6 (lower is better)
Translates to: LAWGSRYWARMV*AFCGWRSLSAV
Trigger: CACGGCAGACAATGACCTCCAGCCACAGAAGGCCCAGACCATCCTGGCCCAGTACCTGGACCCCCAGGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS CAA 72 bp AACTCCAGGCTGAGGCTGTCGCGGAGGGACTCACACTaGGACAGCGGGGGCAGCTTGAGCTTGGCCAGGTAC +
Preference number: 6 (lower is better)
Translates to: NSRLRLSRRDSH*DSGGSLSLARY
Trigger: GTACCTGGCCAAGCTCAAGCTGCCCCCGCTGTCCAAGTGTGAGTCCCTCCGCGACAGCCTCAGCCTGGAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS TCA 72 bp ACTCTGGGGCGTCACCTAGGAAACCAGACACATCCCTaGCTTGGACGAGGAGCTGGAGCCCCCGGAGATGCC +
Preference number: 6 (lower is better)
Translates to: TLGRHLGNQTHP*LGRGAGAPGDA
Trigger: GGCATCTCCGGGGGCTCCAGCTCCTCGTCCAAGTCAGGGATGTGTCTGGTTTCCTAGGTGACGCCCCAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335678.7
ENST00000606140.1
ENST00000631997.1
ENST00000633694.1
ENST00000672946.1
ENST00000672964.1
CDS CAA 90 bp AGGCGCTTCTCCGGGTCCTTCTCCAGCAGCGCCTCGCAGAAGTCCTaGCTGGCCTGGCTGAACTTATCAGGGTACTTCACGGGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: RRFSGSFSSSASQKS*LAWLNLSGYFTGSE
Trigger: CTCAGAGCCCGTGAAGTACCCTGATAAGTTCAGCCAGGCCAGCAAGGACTTCTGCGAGGCGCTGCTGGAGAAGGACCCGGAGAAGCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335678.7
ENST00000545304.1
ENST00000631997.1
ENST00000633083.1
ENST00000672546.1
ENST00000672946.1
CDS TCA 72 bp TGGGCTGCTCCAAGCACACACTCTCAAACTCCAGGCTaGGGCTGTCGCGGAGGGACTCACACTTGGACAGCG +
Preference number: 6 (lower is better)
Translates to: WAAPSTHSQTPG*GCRGGTHTWTA
Trigger: CGCTGTCCAAGTGTGAGTCCCTCCGCGACAGCCTCAGCCTGGAGTTTGAGAGTGTGTGCTTGGAGCAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS CAA 90 bp ACACTCTCAAACTCCAGGCTGAGGCTGTCGCGGAGGGACTCACACTaGGACAGCGGGGGCAGCTTGAGCTTGGCCAGGTACTTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: TLSNSRLRLSRRDSH*DSGGSLSLARYFLS
Trigger: GGACAAGAAGTACCTGGCCAAGCTCAAGCTGCCCCCGCTGTCCAAGTGTGAGTCCCTCCGCGACAGCCTCAGCCTGGAGTTTGAGAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS CCA 72 bp CCACTATCCCCTCATCCAGGAAGCTGCAGAAGAGTTTaGCCTGGGGGTCCAGGTACTGGGCCAGGATGGTCT +
Preference number: 6 (lower is better)
Translates to: PLSPHPGSCRRV*PGGPGTGPGWS
Trigger: AGACCATCCTGGCCCAGTACCTGGACCCCCAGGCCAAACTCTTCTGCAGCTTCCTGGATGAGGGGATAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS CAA 72 bp TCCGGGTCCTTCTCCAGCAGCGCCTCGCAGAAGTCCTaGCTGGCCTGGCTGAACTTATCAGGGTACTTCACG +
Preference number: 6 (lower is better)
Translates to: SGSFSSSASQKS*LAWLNLSGYFT
Trigger: CGTGAAGTACCCTGATAAGTTCAGCCAGGCCAGCAAGGACTTCTGCGAGGCGCTGCTGGAGAAGGACCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335678.7
ENST00000545304.1
ENST00000631997.1
ENST00000633083.1
ENST00000672546.1
ENST00000672946.1
CDS CAA 90 bp GGGCTTGAGTGGGGCCGGAAGAAGCCTGAGATCCCAGGGCTCATTTaGGAGCCTTCTTGTGAAAGGACCTGGCGCTCACATCTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: GLEWGRKKPEIPGLI*EPSCERTWRSHLPC
Trigger: ACAAGGCAGATGTGAGCGCCAGGTCCTTTCACAAGAAGGCTCCAAAATGAGCCCTGGGATCTCAGGCTTCTTCCGGCCCCACTCAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000606140.1
ENST00000633694.1
ENST00000672964.1
CDS TCA 72 bp GCCGGCAGGTGCTTCTCTGCCGATTGTAGGAACTGCTaGAAGAGCTTCTTGCCGATGGGCTGCTCCAAGCAC +
Preference number: 6 (lower is better)
Translates to: AGRCFSADCRNC*KSFLPMGCSKH
Trigger: GTGCTTGGAGCAGCCCATCGGCAAGAAGCTCTTTCAGCAGTTCCTACAATCGGCAGAGAAGCACCTGCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS CCA 72 bp CCAGGGCTCATTTTGGAGCCTTCTTGTGAAAGGACCTaGCGCTCACATCTGCCTTGTTGGGAGCCTCCCCTA +
Preference number: 6 (lower is better)
Translates to: PGLILEPSCERT*RSHLPCWEPPL
Trigger: TAGGGGAGGCTCCCAACAAGGCAGATGTGAGCGCCAGGTCCTTTCACAAGAAGGCTCCAAAATGAGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000606140.1
ENST00000633694.1
ENST00000672964.1
CDS TCA 72 bp GGCCTGGCTGAACTTATCAGGGTACTTCACGGGCTCTaGGATGATCCGGTGCTTCAGCTCCTTGTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: GLAELIRVLHGL*DDPVLQLLVLH
Trigger: GTGGAGAACAAGGAGCTGAAGCACCGGATCATCTCAGAGCCCGTGAAGTACCCTGATAAGTTCAGCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335678.7
ENST00000545304.1
ENST00000631997.1
ENST00000633083.1
ENST00000672546.1
ENST00000672946.1
CDS GCA 72 bp GATGGTCTGGGCCTTCTGTGGCTGGAGGTCATTGTCTaGCGTGTCATAGTCCTCGATGTCTTTCCAGAGCTC +
Preference number: 6 (lower is better)
Translates to: DGLGLLWLEVIV*RVIVLDVFPEL
Trigger: GAGCTCTGGAAAGACATCGAGGACTATGACACGGCAGACAATGACCTCCAGCCACAGAAGGCCCAGACCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS CCA 72 bp CCGATTGTAGGAACTGCTGAAAGAGCTTCTTGCCGATaGGCTGCTCCAAGCACACACTCTCAAACTCCAGGC +
Preference number: 6 (lower is better)
Translates to: PIVGTAERASCR*AAPSTHSQTPG
Trigger: GCCTGGAGTTTGAGAGTGTGTGCTTGGAGCAGCCCATCGGCAAGAAGCTCTTTCAGCAGTTCCTACAATCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS GCA 72 bp GACGGTGGAAAAGGCACCCACGTCCTGAATATCCTTTaGGTAGACAGTTTTGGAGTCTGGGATGAAAGGGGG +
Preference number: 6 (lower is better)
Translates to: DGGKGTHVLNIL*VDSFGVWDERG
Trigger: CCCCCTTTCATCCCAGACTCCAAAACTGTCTACGCAAAGGATATTCAGGACGTGGGTGCCTTTTCCACCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335678.7
ENST00000545304.1
ENST00000606140.1
ENST00000631997.1
ENST00000633083.1
ENST00000633694.1
ENST00000672546.1
ENST00000672946.1
ENST00000672964.1
CDS GCA 72 bp TCTCTGCCGATTGTAGGAACTGCTGAAAGAGCTTCTTaGCGATGGGCTGCTCCAAGCACACACTCTCAAACT +
Preference number: 6 (lower is better)
Translates to: SLPIVGTAERAS*RWAAPSTHSQT
Trigger: AGTTTGAGAGTGTGTGCTTGGAGCAGCCCATCGGCAAGAAGCTCTTTCAGCAGTTCCTACAATCGGCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1
CDS TCA 72 bp AGAATTCTGTGTCTGTTTTGTCAAAGGCCACACCTTTaGCGGTGGAAAAGGCACCCACGTCCTGAATATCCT +
Preference number: 6 (lower is better)
Translates to: RILCLFCQRPHL*RWKRHPRPEYP
Trigger: AGGATATTCAGGACGTGGGTGCCTTTTCCACCGTCAAAGGTGTGGCCTTTGACAAAACAGACACAGAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335678.7
ENST00000545304.1
ENST00000606140.1
ENST00000631997.1
ENST00000633083.1
ENST00000633694.1
ENST00000672546.1
ENST00000672946.1
ENST00000672964.1
CDS TCA 72 bp CGGCTTTGGTTTCAAACGCATAGGCCAGAGACACGATaGACCTGCTGTGTACTTTCATCAGAATCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: RLWFQTHRPETR*TCCVLSSESSS
Trigger: AGAAGAAGATTCTGATGAAAGTACACAGCAGGTTCATCGTGTCTCTGGCCTATGCGTTTGAAACCAAAGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335678.7
ENST00000672946.1