RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRIPAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000068400

Ensembl transcript IDs: ENST00000376423.8, ENST00000473581.5, ENST00000474512.1, ENST00000480041.1, ENST00000488361.1, ENST00000495258.1, ENST00000593475.5, ENST00000611705.4, ENST00000611757.4, ENST00000617369.4, ENST00000619107.1, ENST00000619149.4, ENST00000621664.1, ENST00000622231.1, ENST00000622599.4

Found 486 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTaGACATGGACCACACACCCACCCAGCATCCCCAATCCCAAATGC +
Preference number: 1 (lower is better)
Translates to: CIAFTHTHTHVLLER*TWTTHPPSIPNPKC
Trigger: GCATTTGGGATTGGGGATGCTGGGTGGGTGTGTGGTCCATGTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
3UTR-3UTR TCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTGTCTCCCAAGCTATTTaGTTTTGGCTCCAGCCCTCA +
Preference number: 2 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPVSQAI*FWLQPS
Trigger: TGAGGGCTGGAGCCAAAATCAAATAGCTTGGGAGAC...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
3UTR-3UTR CCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATAAAAGAGTTGGTCTCTaGGAAGGAGAGCTCATGCAG +
Preference number: 2 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINKRVGL*EGELMQ
Trigger: CTGCATGAGCTCTCCTTCCCAGAGACCAACTCTTTT...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
3UTR CAA 90 bp AGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTaGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCA +
Preference number: 2 (lower is better)
Translates to: RPLAPLMSSLPSYLI*APALIFPPQPKGIA
Trigger: TGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
3UTR-3UTR GCA 90 bp TCTGGGTTCGAGCCAACTGGGCTTTGTGATCAGCTTCCTTCCGTTGTTGTAATTCTGGATGTTTCGGCCTaGTTTGAGCTCTCTAAGCCT +
Preference number: 2 (lower is better)
Translates to: SGFEPTGLCDQLPSVVVILDVSA*FELSKP
Trigger: AGGCTTAGAGAGCTCAAAGCAGGCCGAAACATCCAG...AATTACAACAACGGAAGGAAGCTGATCACAAAGCCCAGTTGGCTCGAACCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621664.1
3UTR GCA 72 bp CCCCTTCCCTCAGGATCCCCACTCCCTGGTGGCCTCTaGCCTAAGACAGGATCATTAACACTAACCATCAGG +
Preference number: 3 (lower is better)
Translates to: PLPSGSPLPGGL*PKTGSLTLTIR
Trigger: CCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAGTGGGGATCCTGAGGGAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
3UTR-3UTR CAA 90 bp GCAGCTTCTGGGTTCGAGCCAACTGGGCTTTGTGATCAGCTTCCTTCCGTTGTTATGTTTCGGCCTGCTTaGAGCTCTCTAAGCCTTGCA +
Preference number: 3 (lower is better)
Translates to: AASGFEPTGLCDQLPSVVMFRPA*SSLSLA
Trigger: TGCAAGGCTTAGAGAGCTCAAAGCAGGCCGAAACAT...AACAACGGAAGGAAGCTGATCACAAAGCCCAGTTGGCTCGAACCCAGAAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621664.1
3UTR TCA 72 bp TTTACACACACACACACACACGTGTTGCTAGAACGCTaGACATGGACCACACACCCACCCAGCATCCCCAAT +
Preference number: 3 (lower is better)
Translates to: FTHTHTHVLLER*TWTTHPPSIPN
Trigger: ATTGGGGATGCTGGGTGGGTGTGTGGTCCATGTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
3UTR TCA 72 bp TGCTGCAGCTTCTGGGTTCGAGCCAACTGGGCTTTGTaGTCAGCTTCCTTCCGTTGTTGTAATTCCTCAATC +
Preference number: 3 (lower is better)
Translates to: CCSFWVRANWAL*SASFRCCNSSI
Trigger: GATTGAGGAATTACAACAACGGAAGGAAGCTGATCACAAAGCCCAGTTGGCTCGAACCCAGAAGCTGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621664.1
3UTR-3UTR CAA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACCCAAGCTATTTGATTTaGGCTCCAGCCCTCATTTTT +
Preference number: 3 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNPSYLI*APALIF
Trigger: AAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
3UTR-3UTR CAA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTaGGCTCCAGCCCTCATTTTT +
Preference number: 3 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLPSYLI*APALIF
Trigger: AAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCCTCTGCCAACGGCATaGGGGCCAGGACGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPPLPTA*GPGRWG
Trigger: CCCCCACCGTCCTGGCCCCCATGCCGTTGGCAGAGG...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGCCTCTGCCAACGGCATaGGGGCCAGGACGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGPLPTA*GPGRWG
Trigger: CCCCCACCGTCCTGGCCCCCATGCCGTTGGCAGAGG...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTGGCCCGCAAAGCTGCTaGATGTTCCAGGCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPGPQSC*MFQALP
Trigger: GGGGAGCGCCTGGAACATGCAGCAGCTTTGCGGGCC...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCCTGGGGGATCCCCCTaGCCCTCACTGACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPPGGSP*PSLTAE
Trigger: CTCAGCTGTCAGTGAGGGCCAGGGGGATCCCCCAGG...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATAGCTTGGGCAACCCCTaGTCCTGCAGCCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINSLGNP*SCSPLL
Trigger: AAGGAGGGGGCTGCAGGAGCAGGGGTTGCCCAAGCT...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TCGGAGAGCTTAGCAAGTTCCTCCTGCAGCCTGGATGTTTCGGCCTGCTTTGAGTTTCAGCTCCACCTCTaGCAACGGCATGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SESLASSSCSLDVSACFEFQLHL*QRHGGQ
Trigger: CTGGCCCCCATGCCGTTGGCAGAGGTGGAGCTGAAA...CTCAAAGCAGGCCGAAACATCCAGGCTGCAGGAGGAACTTGCTAAGCTCTCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR GCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTCTCCTCCCGGATCTaGCCACGGAGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPFSSRI*PRSSSS
Trigger: GGAGGAGGAGCTCCGTGGGCAGATCCGGGAGGAGAA...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATTTCTCCTCCCGGATCTaGCCACGGAGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINFSSRI*PRSSSS
Trigger: GGAGGAGGAGCTCCGTGGGCAGATCCGGGAGGAGAA...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTAGCTCGGCAGCGTGCTaGTCCCGACACTGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPSSAAC*SRHCLR
Trigger: CCTCAAGCAGTGTCGGGAGCAGCACGCTGCCGAGCT...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAGGTCTCTCAGGACGCTaGCCAGCCCGCTGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGGLSGR*PARCGL
Trigger: CAGACCGCAGCGGGCTGGGCAGCGTCCTGAGAGACC...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CTGCTGCAGCTTCTGGGTTCGAGCCAACTGGGCTTTGTGATCAGCTTCCTTCCGTCCTGCTGCAGCTTCTaGGTTCGAGCCAACTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLQLLGSSQLGFVISFLPSCCSF*VRANWA
Trigger: AGCCCAGTTGGCTCGAACCCAGAAGCTGCAGCAGGA...CGGAAGGAAGCTGATCACAAAGCCCAGTTGGCTCGAACCCAGAAGCTGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR TCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGACCCCCTGGCCCTCACTaGCAGCTGAGAACTTCCCGG +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGPPGPH*QLRTSR
Trigger: CCGGGAAGTTCTCAGCTGTCAGTGAGGGCCAGGGGG...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCCCCCCTGGCCCTCACTaGCAGCTGAGAACTTCCCGG +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASPPGPH*QLRTSR
Trigger: CCGGGAAGTTCTCAGCTGTCAGTGAGGGCCAGGGGG...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTGGGCCTGCTCGAGCTaGTCCCGTACATCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPWACSS*SRTSCS
Trigger: GCTACAGGATGTACGGGATCAGCTCGAGCAGGCCCA...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTGTCTCTGCCAGCCGCTaGAAGAGCTCAGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPVSASR*KSSATS
Trigger: GGAAGTGGCTGAGCTCTTTCAGCGGCTGGCAGAGAC...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTCCACGCACTCCTTGCTaGGCCGCACAATTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPPRTPC*AAQFPG
Trigger: CCCAGGAAATTGTGCGGCTCAGCAAGGAGTGCGTGG...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAGCTTGGGCAACCCCTaGTCCTGCAGCCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGSLGNP*SCSPLL
Trigger: AAGGAGGGGGCTGCAGGAGCAGGGGTTGCCCAAGCT...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAGCTCGGCAGCGTGCTaGTCCCGACACTGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGSSAAC*SRHCLR
Trigger: CCTCAAGCAGTGTCGGGAGCAGCACGCTGCCGAGCT...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTCAGCTCGGCAGCGTaGTGCTCCCGACACTGCTTG +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPFSSAA*CSRHCL
Trigger: CAAGCAGTGTCGGGAGCAGCACGCTGCCGAGCTGAA...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTGTAGCTCCTCCTCCTTaGCCTTCAGCTCGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPVAPPP*PSARQR
Trigger: ACGCTGCCGAGCTGAAGGGCAAGGAGGAGGAGCTAC...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTAGGGGAGGAGGTGGGTaGAGCCTGCAGGTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPRGGGG*SLQVFS
Trigger: GCTAAAGACCTGCAGGCTGCACCCACCTCCTCCCCT...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCTCTGCCAACGGCATaGGGGCCAGGACGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLPLPTA*GPGRWG
Trigger: CCCCCACCGTCCTGGCCCCCATGCCGTTGGCAGAGG...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATCTGCTGTCCCCTGTCTaGGTCCGGCTTGGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINLLSPV*VRLGEF
Trigger: GAACTCACCAAGCCGGACCCAGACAGGGGACAGCAG...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTGGCTGCAGAGCTTGCTaGACTCGGCCATTAGTGTGC +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPGCRAC*TRPLVC
Trigger: GCACACTAATGGCCGAGTTCAGCAAGCTCTGCAGCC...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR TCA 90 bp TCTGGGTTCGAGCCAACTGGGCTTTGTGATCAGCTTCCTTCCGTTGTTGTAATTCCCCCTGGCCCTCACTaGCAGCTGAGAACTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SGFEPTGLCDQLPSVVVIPPGPH*QLRTSR
Trigger: CCGGGAAGTTCTCAGCTGTCAGTGAGGGCCAGGGGG...AATTACAACAACGGAAGGAAGCTGATCACAAAGCCCAGTTGGCTCGAACCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR TCA 90 bp TCCTCCTGCAGCCTGGATGTTTCGGCCTGCTTTGAGCTCTCTAAGCCTTGCAGCGCCAACTGGGCTTTGTaGTCAGCTTCCTTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: SSCSLDVSACFELSKPCSANWAL*SASFRC
Trigger: ACAACGGAAGGAAGCTGATCACAAAGCCCAGTTGGC...GCTGCAAGGCTTAGAGAGCTCAAAGCAGGCCGAAACATCCAGGCTGCAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATGCCCCCTCCTTCAGTTaGTGGTTCTCTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINAPSFS*WFSCSS
Trigger: GCTGGAGCAAGAGAACCAGCAACTGAAGGAGGGGGC...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTGCCTCAAGTTCCTGCTaGAGCTTCTGGGTTCGAGCC +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPASSSC*SFWVRA
Trigger: GGCTCGAACCCAGAAGCTGCAGCAGGAACTTGAGGC...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTACTCAGCCTGCTGCTaGTGCAACTCAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPYSACC*CNSAAS
Trigger: GCTGGCAGCTGAGTTGCAGCAGCAGCAGGCTGAGTA...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTTACTCAGCCTGCTGCTaGTGCAACTCAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPYSACC*CNSAAS
Trigger: GCTGGCAGCTGAGTTGCAGCAGCAGCAGGCTGAGTA...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTCGTACTCAGCCTGCTaGTGCTGCAACTCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPSYSAC*CCNSAA
Trigger: GGCAGCTGAGTTGCAGCAGCAGCAGGCTGAGTACGA...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATTGTTCCTGCTGCTGCTaGTGCAGGGATTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINCSCCC*CRDSSA
Trigger: AGCCGAGGAATCCCTGCAGCAGCAGCAGCAGGAACA...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGTTCAGCTCGGCAGCGTaGTGCTCCCGACACTGCTTG +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGFSSAA*CSRHCL
Trigger: CAAGCAGTGTCGGGAGCAGCACGCTGCCGAGCTGAA...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGGTAGCTCCTCCTCCTTaGCCTTCAGCTCGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGVAPPP*PSARQR
Trigger: ACGCTGCCGAGCTGAAGGGCAAGGAGGAGGAGCTAC...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTCGCTCCAAATGCAGCTaGCGCTTGAGGTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPRSKCS*RLRSLS
Trigger: GCTCAAGGACCTCAAGCGGCAGCTGCATTTGGAGCG...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATGTCTGTGTGGCCTGCTaGCACAGACACATCGATCCG +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINVCVAC*HRHIDP
Trigger: CGGATCGATGTGTCTGTGGCAGCAGGCCACACAGAC...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATGCGGTCTGTGTGGCCTaGTGCCACAGACACATCGAT +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINAVCVA*CHRHID
Trigger: ATCGATGTGTCTGTGGCAGCAGGCCACACAGACCGC...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGGTCTCTCAGGACGCTaGCCAGCCCGCTGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGIGLSGR*PARCGL
Trigger: CAGACCGCAGCGGGCTGGGCAGCGTCCTGAGAGACC...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGGGTCTCTCAGGACGCTaGCCAGCCCGCTGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILGLSGR*PARCGL
Trigger: CAGACCGCAGCGGGCTGGGCAGCGTCCTGAGAGACC...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATTCCTGCTGCAGCTTCTaGGTTCGAGCCAACTGGGCT +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINSCCSF*VRANWA
Trigger: AGCCCAGTTGGCTCGAACCCAGAAGCTGCAGCAGGA...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATCAGCTGCCAGCCCAGTaGTCTGTTCCCGGAGCATAT +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINQLPAQ*SVPGAY
Trigger: ATATGCTCCGGGAACAGACCACTGGGCTGGCAGCTG...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATCTAGCTCATCCAGCATaGCCTTCCGCTTCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINLAHPA*PSASPH
Trigger: GTGCGGAGAAGCGGAAGGCCATGCTGGATGAGCTAG...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATCTAATGGTCTTCAGGTaGCAGTCCCGCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINLMVFR*QSRSSW
Trigger: CCAGGAGGAGCGGGACTGCCACCTGAAGACCATTAG...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTGTGGGTGGGCCCGTCTaGCCAGATGGTATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPVGGPV*PDGILA
Trigger: AGCCAAAATACCATCTGGCCAGACGGGCCCACCCAC...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTGCCCTCACTGACAGCTaGGAACTTCCCGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPALTDS*ELPGFF
Trigger: AAAGAAGCCGGGAAGTTCTCAGCTGTCAGTGAGGGC...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp CAAGTTCCTCCTGCAGCCTGGATGTTTCGGCCTGCTTTGAGCTCTCTAAGCCTTGCCCTCACTGACAGCTaGGAACTTCCCGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: QVPPAAWMFRPALSSLSLALTDS*ELPGFF
Trigger: AAAGAAGCCGGGAAGTTCTCAGCTGTCAGTGAGGGC...AAGGCTTAGAGAGCTCAAAGCAGGCCGAAACATCCAGGCTGCAGGAGGAACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR TCA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTCCCCCTGGCCCTCACTaGCAGCTGAGAACTTCCCGG +
Preference number: 4 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLIPPGPH*QLRTSR
Trigger: CCGGGAAGTTCTCAGCTGTCAGTGAGGGCCAGGGGG...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACGTCTCTGCCAGCCGCTaGAAGAGCTCAGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNVSASR*KSSATS
Trigger: GGAAGTGGCTGAGCTCTTTCAGCGGCTGGCAGAGAC...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCGTCTCTGCCAGCCGCTaGAAGAGCTCAGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASVSASR*KSSATS
Trigger: GGAAGTGGCTGAGCTCTTTCAGCGGCTGGCAGAGAC...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACTTTCAGCTCCACCTCTaGCAACGGCATGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNFQLHL*QRHGGQ
Trigger: CTGGCCCCCATGCCGTTGGCAGAGGTGGAGCTGAAA...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGATTTCAGCTCCACCTCTaGCAACGGCATGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGFQLHL*QRHGGQ
Trigger: CTGGCCCCCATGCCGTTGGCAGAGGTGGAGCTGAAA...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CTGCTGCAGCTTCTGGGTTCGAGCCAACTGGGCTTTGTGATCAGCTTCCTTCCGCTGGATGTTTCGGCCTaGTTTGAGCTCTCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: LLQLLGSSQLGFVISFLPLDVSA*FELSKP
Trigger: AGGCTTAGAGAGCTCAAAGCAGGCCGAAACATCCAG...CGGAAGGAAGCTGATCACAAAGCCCAGTTGGCTCGAACCCAGAAGCTGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR GCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTGCAGCCTCAAGTTCCTaGTGCAGCTTCTGGGTTCGA +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPAASSS*CSFWVR
Trigger: TCGAACCCAGAAGCTGCAGCAGGAACTTGAGGCTGC...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATGCAGCCTCAAGTTCCTaGTGCAGCTTCTGGGTTCGA +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINAASSS*CSFWVR
Trigger: TCGAACCCAGAAGCTGCAGCAGGAACTTGAGGCTGC...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TTCCTGCTGCAGCTTCTGGGTTCGAGCCAACTGGGCTTTGTGATCAGCTTCCTTGCAGCCTCAAGTTCCTaGTGCAGCTTCTGGGTTCGA +
Preference number: 4 (lower is better)
Translates to: FLLQLLGSSQLGFVISFLAASSS*CSFWVR
Trigger: TCGAACCCAGAAGCTGCAGCAGGAACTTGAGGCTGC...AAGGAAGCTGATCACAAAGCCCAGTTGGCTCGAACCCAGAAGCTGCAGCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR GCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTGCAGCCTCAAGTTCCTaGTGCAGCTTCTGGGTTCGA +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPAASSS*CSFWVR
Trigger: TCGAACCCAGAAGCTGCAGCAGGAACTTGAGGCTGC...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTGGCCCGCAAAGCTGCTaGATGTTCCAGGCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLIGPQSC*MFQALP
Trigger: GGGGAGCGCCTGGAACATGCAGCAGCTTTGCGGGCC...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCGGCCCGCAAAGCTGCTaGATGTTCCAGGCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLGPQSC*MFQALP
Trigger: GGGGAGCGCCTGGAACATGCAGCAGCTTTGCGGGCC...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGTCGTACTCAGCCTGCTaGTGCTGCAACTCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGSYSAC*CCNSAA
Trigger: GGCAGCTGAGTTGCAGCAGCAGCAGGCTGAGTACGA...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTCCTCGTACTCAGCCTaGTGCTGCTGCAACTCAGCT +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPSSYSA*CCCNSA
Trigger: AGCTGAGTTGCAGCAGCAGCAGGCTGAGTACGAGGA...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTCCCAGCTCTTCCTTGTaGTGGGACTTCTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPPSSSL*WDFSCS
Trigger: GCTGCAAGAGAAGTCCCAGCACAAGGAAGAGCTGGG...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATCCCAGCTCTTCCTTGTaGTGGGACTTCTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINPSSSL*WDFSCS
Trigger: GCTGCAAGAGAAGTCCCAGCACAAGGAAGAGCTGGG...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTTGCTGCTCCCGACACTaGTTGAGGGCTTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPCCSRH*LRASSC
Trigger: ACAAGAGGAAGCCCTCAAGCAGTGTCGGGAGCAGCA...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATTGCTGCTCCCGACACTaGTTGAGGGCTTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINCCSRH*LRASSC
Trigger: ACAAGAGGAAGCCCTCAAGCAGTGTCGGGAGCAGCA...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGATTCAGCTCGGCAGCGTaGTGCTCCCGACACTGCTTG +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGFSSAA*CSRHCL
Trigger: CAAGCAGTGTCGGGAGCAGCACGCTGCCGAGCTGAA...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCGTAGCTCCTCCTCCTTaGCCTTCAGCTCGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASVAPPP*PSARQR
Trigger: ACGCTGCCGAGCTGAAGGGCAAGGAGGAGGAGCTAC...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGCGCTCCAAATGCAGCTaGCGCTTGAGGTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGRSKCS*RLRSLS
Trigger: GCTCAAGGACCTCAAGCGGCAGCTGCATTTGGAGCG...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATTCCTGCAGTCGCTCCTaGAGCTTATCTGCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINSCSRS*SLSARF
Trigger: GAAACGGGCAGATAAGCTGCAGGAGCGACTGCAGGA...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCGCTGGGCTTGAGGGCTaGTGGATAAGGACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASAGLEG*WIRTWL
Trigger: CAGCCAGGTCCTTATCCAGCAGCCCTCAAGCCCAGC...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATAGCATCCATTTCTCCTaGTGTGTCTCTGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINSIHFS*CVSASR
Trigger: GCGGCTGGCAGAGACACAGCAGGAGAAATGGATGCT...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATCTGCTCACTTCCAGGTaGTTCACCTTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINLLTSR*FTFSSS
Trigger: GCTGGAGGAGAAGGTGAAGCACCTGGAAGTGAGCAG...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATACCTGGGGGATCCCCCTaGCCCTCACTGACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGIPGGSP*PSLTAE
Trigger: CTCAGCTGTCAGTGAGGGCCAGGGGGATCCCCCAGG...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGCCTGGGGGATCCCCCTaGCCCTCACTGACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILPGGSP*PSLTAE
Trigger: CTCAGCTGTCAGTGAGGGCCAGGGGGATCCCCCAGG...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTTGGGTCTTTGCTGTTTaGATCTGCTCCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPWVFAV*ICSRAA
Trigger: GGCTGCCCTGGAGCAGATCCAAACAGCAAAGACCCA...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR CCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTGCCCGTAATGACTCCTaGAGCTGGGAGTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPARNDS*SWELRS
Trigger: TGACCTCAACTCCCAGCTCCAGGAGTCATTACGGGC...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGACTGCTGTCCCCTGTCTaGGTCCGGCTTGGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGLLSPV*VRLGEF
Trigger: GAACTCACCAAGCCGGACCCAGACAGGGGACAGCAG...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGGTGGGTGGGCCCGTCTaGCCAGATGGTATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGVGGPV*PDGILA
Trigger: AGCCAAAATACCATCTGGCCAGACGGGCCCACCCAC...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATCTCTGGATGGATACCTaGTCTTGTAGGGCCCGCAAA +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINLWMDT*SCRARK
Trigger: TTTGCGGGCCCTACAAGATCAGGTATCCATCCAGAG...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR TCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGCCTGGAGCTGGGAGTTaGGGTCATCTTTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGPGAGS*GHLSVP
Trigger: TGGGACAGAAAGATGACCTCAACTCCCAGCTCCAGG...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAGATCTCCCGGTAGCTaGAGGAGGAGATGCTACTGC +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGRSPGS*RRRCYC
Trigger: GCAGTAGCATCTCCTCCTTCAGCTACCGGGAGATCT...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATGTGTTGCTAGAACGCTaGACATGGACCACACACCCA +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINVLLER*TWTTHP
Trigger: TGGGTGTGTGGTCCATGTTCAGCGTTCTAGCAACAC...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGATCCTCCTCCTGGCTGTaGAGCTTTGCCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGSSSWL*SFACSI
Trigger: GATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGA...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR GCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCGCCCCCTCCTTCAGTTaGTGGTTCTCTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASAPSFS*WFSCSS
Trigger: GCTGGAGCAAGAGAACCAGCAACTGAAGGAGGGGGC...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCGGCAACCCCTGCTCCTaGAGCCCCCTCCTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLGNPCS*SPLLQL
Trigger: CAACTGAAGGAGGGGGCTGCAGGAGCAGGGGTTGCC...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTGGCAACCCCTGCTCCTaGAGCCCCCTCCTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLIGNPCS*SPLLQL
Trigger: CAACTGAAGGAGGGGGCTGCAGGAGCAGGGGTTGCC...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATGGCAACCCCTGCTCCTaGAGCCCCCTCCTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNGNPCS*SPLLQL
Trigger: CAACTGAAGGAGGGGGCTGCAGGAGCAGGGGTTGCC...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGCCCAGCTCTTCCTTGTaGTGGGACTTCTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGPSSSL*WDFSCS
Trigger: GCTGCAAGAGAAGTCCCAGCACAAGGAAGAGCTGGG...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATTTCTCCTCCCGGATCTaGCCACGGAGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNFSSRI*PRSSSS
Trigger: GGAGGAGGAGCTCCGTGGGCAGATCCGGGAGGAGAA...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATAGTTCTTCCACTGTCTaGTGGAGAGTCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINSSSTV*WRVSSS
Trigger: GGAGCTGGAGACTCTCCAGCAGACAGTGGAAGAACT...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCTGTTCCTGCTGCTGCTaGTGCAGGGATTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASCSCCC*CRDSSA
Trigger: AGCCGAGGAATCCCTGCAGCAGCAGCAGCAGGAACA...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGTGCTGCTCCCGACACTaGTTGAGGGCTTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGCCSRH*LRASSC
Trigger: ACAAGAGGAAGCCCTCAAGCAGTGTCGGGAGCAGCA...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCAGCTCGGCAGCGTGCTaGTCCCGACACTGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLSSAAC*SRHCLR
Trigger: CCTCAAGCAGTGTCGGGAGCAGCACGCTGCCGAGCT...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTGTGTCCTTCACCTCCTaGTTCAGGCTGCTAATGGTC +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPVSFTS*FRLLMV
Trigger: GACCATTAGCAGCCTGAAGCAGGAGGTGAAGGACAC...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTGTGTCCTTCACCTCCTaGTTCAGGCTGCTAATGGTC +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPVSFTS*FRLLMV
Trigger: GACCATTAGCAGCCTGAAGCAGGAGGTGAAGGACAC...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTTTCTCCAGGATCCTCTaGCCATCCACTGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPFSRIL*PSTVSF
Trigger: GAAGGACACAGTGGATGGGCAGAGGATCCTGGAGAA...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATTTCTCCAGGATCCTCTaGCCATCCACTGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINFSRIL*PSTVSF
Trigger: GAAGGACACAGTGGATGGGCAGAGGATCCTGGAGAA...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACCGTTTCCGCTCCAAATaGAGCTGCCGCTTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNRFRSK*SCRLRS
Trigger: GGACCTCAAGCGGCAGCTGCATTTGGAGCGGAAACG...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCCGTTTCCGCTCCAAATaGAGCTGCCGCTTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASRFRSK*SCRLRS
Trigger: GGACCTCAAGCGGCAGCTGCATTTGGAGCGGAAACG...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTCTCCTGCAGCTTATCTaGCCGTTTCCGCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPLLQLI*PFPLQM
Trigger: CATTTGGAGCGGAAACGGGCAGATAAGCTGCAGGAG...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGTCCTGCAGTCGCTCCTaGAGCTTATCTGCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGSCSRS*SLSARF
Trigger: GAAACGGGCAGATAAGCTGCAGGAGCGACTGCAGGA...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAAGGAGGAGATGCTACTaGTGTCCCCTGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGRRRCY*CPLSGS
Trigger: GGACCCAGACAGGGGACAGCAGTAGCATCTCCTCCT...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACCTCCTGCTGTGTCTCTaGCAGCCGCTGAAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNLLLCL*QPLKEL
Trigger: GAGCTCTTTCAGCGGCTGGCAGAGACACAGCAGGAG...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGCTGCTCACTTCCAGGTaGTTCACCTTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGLLTSR*FTFSSS
Trigger: GCTGGAGGAGAAGGTGAAGCACCTGGAAGTGAGCAG...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTCTGCCATGGAAGCACTaGTCACTTCCAGGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPLPWKH*SLPGAS
Trigger: TGAAGCACCTGGAAGTGAGCAGTGCTTCCATGGCAG...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACGCGGTCTGTGTGGCCTaGTGCCACAGACACATCGAT +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNAVCVA*CHRHID
Trigger: ATCGATGTGTCTGTGGCAGCAGGCCACACAGACCGC...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATCTCCCTGGTGGCCTCTaGCCTAAGACAGGATCATTA +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINLPGGL*PKTGSL
Trigger: TAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTCCCTGGTGGCCTCTaGCCTAAGACAGGATCATTA +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPLPGGL*PKTGSL
Trigger: TAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATGCTGTTCCATCTGGCTaGAGAGCTTCTGAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINAVPSG*RASELC
Trigger: GCAAAGCTCAGAAGCTCTGCAGCCAGATGGAACAGC...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622599.4
CDS-3UTR CCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTCCAGCTGTTCCATCTaGCTGCAGAGCTTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPSSCSI*LQSLLN
Trigger: GTTCAGCAAGCTCTGCAGCCAGATGGAACAGCTGGA...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR CCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTCCCTCCTTCAGTTGCTaGTTCTCTTGCTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPPSFSC*FSCSSC
Trigger: ACAGCTGGAGCAAGAGAACCAGCAACTGAAGGAGGG...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp AAACTTTCTTGTTTCTTTTTCAGTTTCTCGGAGAGCTTAGCAAGTTCCTCCTGCCCTCTGCCAACGGCATaGGGGCCAGGACGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: KLSCFFFSFSESLASSSCPLPTA*GPGRWG
Trigger: CCCCCACCGTCCTGGCCCCCATGCCGTTGGCAGAGG...GCAGGAGGAACTTGCTAAGCTCTCCGAGAAACTGAAAAAGAAACAAGAAAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR CCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACTCCTGCTGCAGCTTCTaGGTTCGAGCCAACTGGGCT +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNSCCSF*VRANWA
Trigger: AGCCCAGTTGGCTCGAACCCAGAAGCTGCAGCAGGA...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATCTGCCAAGCTCTGATTaGCAGCCTCAAGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINLPSSD*QPQVPA
Trigger: AGCAGGAACTTGAGGCTGCCAATCAGAGCTTGGCAG...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACCTAGCTCATCCAGCATaGCCTTCCGCTTCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNLAHPA*PSASPH
Trigger: GTGCGGAGAAGCGGAAGGCCATGCTGGATGAGCTAG...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGACTAATGGTCTTCAGGTaGCAGTCCCGCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGLMVFR*QSRSSW
Trigger: CCAGGAGGAGCGGGACTGCCACCTGAAGACCATTAG...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACCTAATGGTCTTCAGGTaGCAGTCCCGCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNLMVFR*QSRSSW
Trigger: CCAGGAGGAGCGGGACTGCCACCTGAAGACCATTAG...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGCCGCTGCGGTCTGTGTaGCCTGCTGCCACAGACACA +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILPLRSV*PAATDT
Trigger: TGTGTCTGTGGCAGCAGGCCACACAGACCGCAGCGG...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATCCGCTGCGGTCTGTGTaGCCTGCTGCCACAGACACA +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNPLRSV*PAATDT
Trigger: TGTGTCTGTGGCAGCAGGCCACACAGACCGCAGCGG...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATACCGCTGCGGTCTGTGTaGCCTGCTGCCACAGACACA +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGIPLRSV*PAATDT
Trigger: TGTGTCTGTGGCAGCAGGCCACACAGACCGCAGCGG...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCGTGGGTGGGCCCGTCTaGCCAGATGGTATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASVGGPV*PDGILA
Trigger: AGCCAAAATACCATCTGGCCAGACGGGCCCACCCAC...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATATGGGCCTGCTCGAGCTaGTCCCGTACATCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGIWACSS*SRTSCS
Trigger: GCTACAGGATGTACGGGATCAGCTCGAGCAGGCCCA...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACAGATCTCCCGGTAGCTaGAGGAGGAGATGCTACTGC +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNRSPGS*RRRCYC
Trigger: GCAGTAGCATCTCCTCCTTCAGCTACCGGGAGATCT...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTAGTGCATATTCTTGGTaGGCTGCTCCTCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPSAYSW*AAPPAC
Trigger: ACATGCTGGAGGAGCAGCTCACCAAGAATATGCACT...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGCCACGCACTCCTTGCTaGGCCGCACAATTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILPRTPC*AAQFPG
Trigger: CCCAGGAAATTGTGCGGCTCAGCAAGGAGTGCGTGG...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATACCACGCACTCCTTGCTaGGCCGCACAATTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGIPRTPC*AAQFPG
Trigger: CCCAGGAAATTGTGCGGCTCAGCAAGGAGTGCGTGG...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGGTGTTGCTAGAACGCTaGACATGGACCACACACCCA +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGVLLER*TWTTHP
Trigger: TGGGTGTGTGGTCCATGTTCAGCGTTCTAGCAACAC...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp GCAAGTTCCTCCTGCAGCCTGGATGTTTCGGCCTGCTTTGAGCTCTCTAAGCCTACTCGGCCATTAGTGTaGTGTTCTGCAAACGGAAGT +
Preference number: 4 (lower is better)
Translates to: ASSSCSLDVSACFELSKPTRPLV*CSANGS
Trigger: ACTTCCGTTTGCAGAACAGCACACTAATGGCCGAGT...AGGCTTAGAGAGCTCAAAGCAGGCCGAAACATCCAGGCTGCAGGAGGAACTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR GCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGTTTCAGCTCCACCTCTaGCAACGGCATGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILFQLHL*QRHGGQ
Trigger: CTGGCCCCCATGCCGTTGGCAGAGGTGGAGCTGAAA...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TTCTCGGAGAGCTTAGCAAGTTCCTCCTGCAGCCTGGATGTTTCGGCCTGCTTTGAGCTCTCTAAGCCTTaGAGCTGTTCCCAGAGCAAT +
Preference number: 4 (lower is better)
Translates to: FSESLASSSCSLDVSACFELSKP*SCSQSN
Trigger: ATTGCTCTGGGAACAGCTGCAAGGCTTAGAGAGCTC...AAAGCAGGCCGAAACATCCAGGCTGCAGGAGGAACTTGCTAAGCTCTCCGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR GCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGACGCTTCTTGTCTTCATaGAGCTCTCGGAGCTCACGC +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGRFLSS*SSRSSR
Trigger: GCGTGAGCTCCGAGAGCTGCATGAAGACAAGAAGCG...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGCTCCTGCAGCTTATCTaGCCGTTTCCGCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGLLQLI*PFPLQM
Trigger: CATTTGGAGCGGAAACGGGCAGATAAGCTGCAGGAG...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTTTAGTGAGGATGTCCTaGAGTCGCTCCTGCAGCTTA +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPLVRMS*SRSCSL
Trigger: TAAGCTGCAGGAGCGACTGCAGGACATCCTCACTAA...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCGCTGGGCTTGAGGGCTaGTGGATAAGGACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLAGLEG*WIRTWL
Trigger: CAGCCAGGTCCTTATCCAGCAGCCCTCAAGCCCAGC...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCGAGGTGGGTGCAGCCTaGAGGTCTTTAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASEVGAA*RSLAGF
Trigger: GAAACCAGCTAAAGACCTGCAGGCTGCACCCACCTC...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGGGGAGGAGGTGGGTaGAGCCTGCAGGTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNRGGGG*SLQVFS
Trigger: GCTAAAGACCTGCAGGCTGCACCCACCTCCTCCCCT...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAAGGGGAGGAGGTGGGTaGAGCCTGCAGGTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGIRGGGG*SLQVFS
Trigger: GCTAAAGACCTGCAGGCTGCACCCACCTCCTCCCCT...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCAGAAGGAGAAATCCCTaGCCCTTCCCTCAGGATCCC +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASRRRNP*PFPQDP
Trigger: GGGATCCTGAGGGAAGGGGCAGGGATTTCTCCTTCT...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACAGAAGGAGAAATCCCTaGCCCTTCCCTCAGGATCCC +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNRRRNP*PFPQDP
Trigger: GGGATCCTGAGGGAAGGGGCAGGGATTTCTCCTTCT...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATGGGAAGGAGAGCTCATaGAGAGATGAAGACAGAAGC +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINGKESS*RDEDRS
Trigger: GCTTCTGTCTTCATCTCTGCATGAGCTCTCCTTCCC...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGCCCTCCTTCAGTTGCTaGTTCTCTTGCTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGPSFSC*FSCSSC
Trigger: ACAGCTGGAGCAAGAGAACCAGCAACTGAAGGAGGG...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACGCCCGTAATGACTCCTaGAGCTGGGAGTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNARNDS*SWELRS
Trigger: TGACCTCAACTCCCAGCTCCAGGAGTCATTACGGGC...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGCCAGCAGTCGACTATTaGCCCGTAATGACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGPAVDY*PVMTPG
Trigger: TCCAGGAGTCATTACGGGCCAATAGTCGACTGCTGG...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTAGCTCTTCCTTGTGCTaGGACTTCTCTTGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPSSSLC*DFSCSV
Trigger: AACGCTGCAAGAGAAGTCCCAGCACAAGGAAGAGCT...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTCTGCTGTCCCCTGTCTaGGTCCGGCTTGGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLILLSPV*VRLGEF
Trigger: GAACTCACCAAGCCGGACCCAGACAGGGGACAGCAG...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTGCAGGTCTTTAGCTaGTTTCTCCTGGCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPLQVFS*FLLALG
Trigger: ACCTAGAGCCAGGAGAAACCAGCTAAAGACCTGCAG...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGGAAGACAGAAGCCCTTaGGAGCCAGGACCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGEDRSP*EPGPRR
Trigger: TCTTCTTGGTCCTGGCTCCCAAGGGCTTCTGTCTTC...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACGCCCGTCTGGCCAGATaGTATTTTGGCTGCATAGCC +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNARLAR*YFGCIA
Trigger: GGCTATGCAGCCAAAATACCATCTGGCCAGACGGGC...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAGCCCGTCTGGCCAGATaGTATTTTGGCTGCATAGCC +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGARLAR*YFGCIA
Trigger: GGCTATGCAGCCAAAATACCATCTGGCCAGACGGGC...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTCTGTCGAAGACTGGTaGGTTCAACACCATTCTTGC +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPSVEDW*VQHHSC
Trigger: GCAAGAATGGTGTTGAACTCACCAGTCTTCGACAGA...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATCCTTCTGAGCTTTGCTaGACTCCTTATCCAAGTAGG +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINPSELC*TPYPSR
Trigger: CCTACTTGGATAAGGAGTTCAGCAAAGCTCAGAAGG...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR TCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGGCTGCAGAGCTTGCTaGACTCGGCCATTAGTGTGC +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGIGCRAC*TRPLVC
Trigger: GCACACTAATGGCCGAGTTCAGCAAGCTCTGCAGCC...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR TCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCCTCTGGATGGATACCTaGTCTTGTAGGGCCCGCAAA +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASLWMDT*SCRARK
Trigger: TTTGCGGGCCCTACAAGATCAGGTATCCATCCAGAG...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR TCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAGTGCATATTCTTGGTaGGCTGCTCCTCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGSAYSW*AAPPAC
Trigger: ACATGCTGGAGGAGCAGCTCACCAAGAATATGCACT...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAGAGCTCATGCAGAGATaGAGACAGAAGCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGELMQR*RQKPLG
Trigger: TCCCAAGGGCTTCTGTCTTCATCTCTGCATGAGCTC...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCGAGCTCATGCAGAGATaGAGACAGAAGCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASELMQR*RQKPLG
Trigger: TCCCAAGGGCTTCTGTCTTCATCTCTGCATGAGCTC...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATCTTGCTCTTGCTCAGTaGCTTCTGAGCTTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINLALAQ*LLSFAE
Trigger: TTCAGCAAAGCTCAGAAGGCACTGAGCAAGAGCAAG...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR GCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATTCCTCCTCCTGGCTGTaGAGCTTTGCCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNSSSWL*SFACSI
Trigger: GATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGA...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR GCA 90 bp TTCTCGGAGAGCTTAGCAAGTTCCTCCTGCAGCCTGGATGTTTCGGCCTGCTTTATTAGTGTGCTGTTCTaGAAACGGAAGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FSESLASSSCSLDVSACFISVLF*KRKSSS
Trigger: GGAGGAGGACTTCCGTTTGCAGAACAGCACACTAAT...AAAGCAGGCCGAAACATCCAGGCTGCAGGAGGAACTTGCTAAGCTCTCCGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR GCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATGCCCCCTCCTTCAGTTaGTGGTTCTCTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNAPSFS*WFSCSS
Trigger: GCTGGAGCAAGAGAACCAGCAACTGAAGGAGGGGGC...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCGCTGCCACGTTCTTCTaGAAGGCTGTGTTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASAATFF*KAVFSA
Trigger: GGCTGAAAACACAGCCTTGCAGAAGAACGTGGCAGC...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAGCTGCCACGTTCTTCTaGAAGGCTGTGTTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGAATFF*KAVFSA
Trigger: GGCTGAAAACACAGCCTTGCAGAAGAACGTGGCAGC...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACGCTGCCACGTTCTTCTaGAAGGCTGTGTTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNAATFF*KAVFSA
Trigger: GGCTGAAAACACAGCCTTGCAGAAGAACGTGGCAGC...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGGAGCTCTCTAAGCCTTaGAGCTGTTCCCAGAGCAAT +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGELSKP*SCSQSN
Trigger: ATTGCTCTGGGAACAGCTGCAAGGCTTAGAGAGCTC...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCCTCAAGTTCCTGCTaGAGCTTCTGGGTTCGAGCC +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGIASSSC*SFWVRA
Trigger: GGCTCGAACCCAGAAGCTGCAGCAGGAACTTGAGGC...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCGCCTCAAGTTCCTGCTaGAGCTTCTGGGTTCGAGCC +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLASSSC*SFWVRA
Trigger: GGCTCGAACCCAGAAGCTGCAGCAGGAACTTGAGGC...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACCTGATCTCTCAGCTCTaGCAAGCTCTGATTGGCAGC +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNLISQL*QALIGS
Trigger: GCTGCCAATCAGAGCTTGGCAGAGCTGAGAGATCAG...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTCCACTTGTTCCTGTaGATCTGCACTCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPFHLFL*ICTLDG
Trigger: TCCATCCAGAGTGCAGATGCACAGGAACAAGTGGAA...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR GCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTCAGTTCTTGGGTCTTTaGTGTTTGGATCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPQFLGL*CLDLLQ
Trigger: CTGGAGCAGATCCAAACAGCAAAGACCCAAGAACTG...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATCAGTTCTTGGGTCTTTaGTGTTTGGATCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINQFLGL*CLDLLQ
Trigger: CTGGAGCAGATCCAAACAGCAAAGACCCAAGAACTG...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCTACTCAGCCTGCTGCTaGTGCAACTCAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLYSACC*CNSAAS
Trigger: GCTGGCAGCTGAGTTGCAGCAGCAGCAGGCTGAGTA...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGTCGTACTCAGCCTGCTaGTGCTGCAACTCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILSYSAC*CCNSAA
Trigger: GGCAGCTGAGTTGCAGCAGCAGCAGGCTGAGTACGA...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGTGCTGGGACTTCTCTTaGAGCGTTTCCATTGCTAGC +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGCWDFS*SVSIAS
Trigger: GCTAGCAATGGAAACGCTGCAAGAGAAGTCCCAGCA...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAAGTTCTTCCACTGTCTaGTGGAGAGTCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGSSSTV*WRVSSS
Trigger: GGAGCTGGAGACTCTCCAGCAGACAGTGGAAGAACT...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATATGTTCCTGCTGCTGCTaGTGCAGGGATTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGICSCCC*CRDSSA
Trigger: AGCCGAGGAATCCCTGCAGCAGCAGCAGCAGGAACA...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATCGCTCCAAATGCAGCTaGCGCTTGAGGTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNRSKCS*RLRSLS
Trigger: GCTCAAGGACCTCAAGCGGCAGCTGCATTTGGAGCG...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGCGTTTCCGCTCCAAATaGAGCTGCCGCTTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILRFRSK*SCRLRS
Trigger: GGACCTCAAGCGGCAGCTGCATTTGGAGCGGAAACG...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGAGGAGGAGATGCTACTaGTGTCCCCTGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILRRRCY*CPLSGS
Trigger: GGACCCAGACAGGGGACAGCAGTAGCATCTCCTCCT...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGGAGGAGATGCTACTaGTGTCCCCTGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNRRRCY*CPLSGS
Trigger: GGACCCAGACAGGGGACAGCAGTAGCATCTCCTCCT...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGCTCCTGCTGTGTCTCTaGCAGCCGCTGAAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILLLLCL*QPLKEL
Trigger: GAGCTCTTTCAGCGGCTGGCAGAGACACAGCAGGAG...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATCTCCTGCTGTGTCTCTaGCAGCCGCTGAAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNLLLCL*QPLKEL
Trigger: GAGCTCTTTCAGCGGCTGGCAGAGACACAGCAGGAG...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGACTGCCATGGAAGCACTaGTCACTTCCAGGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGLPWKH*SLPGAS
Trigger: TGAAGCACCTGGAAGTGAGCAGTGCTTCCATGGCAG...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCGTCTGTGTGGCCTGCTaGCACAGACACATCGATCCG +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLVCVAC*HRHIDP
Trigger: CGGATCGATGTGTCTGTGGCAGCAGGCCACACAGAC...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGGTCTGTGTGGCCTGCTaGCACAGACACATCGATCCG +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILVCVAC*HRHIDP
Trigger: CGGATCGATGTGTCTGTGGCAGCAGGCCACACAGAC...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCGCGGTCTGTGTGGCCTaGTGCCACAGACACATCGAT +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLAVCVA*CHRHID
Trigger: ATCGATGTGTCTGTGGCAGCAGGCCACACAGACCGC...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCTCCAGCTGTTCCATCTaGCTGCAGAGCTTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASSSCSI*LQSLLN
Trigger: GTTCAGCAAGCTCTGCAGCCAGATGGAACAGCTGGA...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR CCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCTCCTGCTGCAGCTTCTaGGTTCGAGCCAACTGGGCT +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLSCCSF*VRANWA
Trigger: AGCCCAGTTGGCTCGAACCCAGAAGCTGCAGCAGGA...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCCTGCCAAGCTCTGATTaGCAGCCTCAAGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASLPSSD*QPQVPA
Trigger: AGCAGGAACTTGAGGCTGCCAATCAGAGCTTGGCAG...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGACTGCCAAGCTCTGATTaGCAGCCTCAAGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGLPSSD*QPQVPA
Trigger: AGCAGGAACTTGAGGCTGCCAATCAGAGCTTGGCAG...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTCATCTGCACTCTGGATaGATACCTGATCTTGTAGGG +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPHLHSG*IPDLVG
Trigger: CCCTACAAGATCAGGTATCCATCCAGAGTGCAGATG...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR CCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATCAGCTGCCAGCCCAGTaGTCTGTTCCCGGAGCATAT +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNQLPAQ*SVPGAY
Trigger: ATATGCTCCGGGAACAGACCACTGGGCTGGCAGCTG...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAGCTCTTCCTTGTGCTaGGACTTCTCTTGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGSSSLC*DFSCSV
Trigger: AACGCTGCAAGAGAAGTCCCAGCACAAGGAAGAGCT...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATCCTTGGCTCCATCCATaGAATGTACCTGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINPWLHP*NVPELE
Trigger: TTCAAGCTCAGGTACATTCCATGGATGGAGCCAAGG...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTGTTCAAACCAGCCCTTaGCTCCATCCATGGAATGTA +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPVQTSP*LHPWNV
Trigger: TACATTCCATGGATGGAGCCAAGGGCTGGTTTGAAC...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTGTTCAAACCAGCCCTTaGCTCCATCCATGGAATGTA +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPVQTSP*LHPWNV
Trigger: TACATTCCATGGATGGAGCCAAGGGCTGGTTTGAAC...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAGAAGACAGAAGCCCTTaGGAGCCAGGACCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGEDRSP*EPGPRR
Trigger: TCTTCTTGGTCCTGGCTCCCAAGGGCTTCTGTCTTC...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATACCTCGACTTCCTaGGCTTTCTTGCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGNTSTS*AFLLLL
Trigger: GAGCAAGAGCAAGAAAGCTCAGGAAGTCGAGGTATT...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR TCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGGCCCTCACTGACAGCTaGGAACTTCCCGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILALTDS*ELPGFF
Trigger: AAAGAAGCCGGGAAGTTCTCAGCTGTCAGTGAGGGC...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCCCTCACTGACAGCTaGGAACTTCCCGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGIALTDS*ELPGFF
Trigger: AAAGAAGCCGGGAAGTTCTCAGCTGTCAGTGAGGGC...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGCCTGGAGCTGGGAGTTaGGGTCATCTTTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILPGAGS*GHLSVP
Trigger: TGGGACAGAAAGATGACCTCAACTCCCAGCTCCAGG...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCTGGAGCTGGGAGTTaGGGTCATCTTTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLPGAGS*GHLSVP
Trigger: TGGGACAGAAAGATGACCTCAACTCCCAGCTCCAGG...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGATCTCCCGGTAGCTaGAGGAGGAGATGCTACTGC +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNRSPGS*RRRCYC
Trigger: GCAGTAGCATCTCCTCCTTCAGCTACCGGGAGATCT...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAGTCTCCCAAGCTATTTaGTTTTGGCTCCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGVSQAI*FWLQPS
Trigger: TGAGGGCTGGAGCCAAAATCAAATAGCTTGGGAGAC...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp CCAACTGGGCTTTGTGATCAGCTTCCTTCCGTTGTTGTAATTCCTCAATCTTGTTCCTGCAGGGCTTGCTaGACTCGGCCATTAGTGTGC +
Preference number: 4 (lower is better)
Translates to: PTGLCDQLPSVVVIPQSCSCRAC*TRPLVC
Trigger: GCACACTAATGGCCGAGTTCAGCAAGCCCTGCAGGA...ACAAGATTGAGGAATTACAACAACGGAAGGAAGCTGATCACAAAGCCCAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR TCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACTGGCTGCAGAGCTTCTaGGCTTTGCTGAACTCCTTA +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNWLQSF*ALLNSL
Trigger: TAAGGAGTTCAGCAAAGCTCAGAAGCTCTGCAGCCA...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGATTAGTGTGCTGTTCTaGAAACGGAAGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGISVLF*KRKSSS
Trigger: GGAGGAGGACTTCCGTTTGCAGAACAGCACACTAAT...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR GCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACCTGGATGTTTCGGCCTaGTTTGAGCTCTCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNLDVSA*FELSKP
Trigger: AGGCTTAGAGAGCTCAAAGCAGGCCGAAACATCCAG...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATTCCTCGTACTCAGCCTaGTGCTGCTGCAACTCAGCT +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNSSYSA*CCCNSA
Trigger: AGCTGAGTTGCAGCAGCAGCAGGCTGAGTACGAGGA...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGTCCTCGTACTCAGCCTaGTGCTGCTGCAACTCAGCT +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILSSYSA*CCCNSA
Trigger: AGCTGAGTTGCAGCAGCAGCAGGCTGAGTACGAGGA...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGATGCTGGGACTTCTCTTaGAGCGTTTCCATTGCTAGC +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGCWDFS*SVSIAS
Trigger: GCTAGCAATGGAAACGCTGCAAGAGAAGTCCCAGCA...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCAGCACCTCCTTCTCATaGCGTAGACGAACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLSTSFS*RRRTAP
Trigger: GGGAGCAGTTCGTCTACGGCATGAGAAGGAGGTGCT...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGAGCACCTCCTTCTCATaGCGTAGACGAACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILSTSFS*RRRTAP
Trigger: GGGAGCAGTTCGTCTACGGCATGAGAAGGAGGTGCT...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCACCTCCTTCTCATaGCGTAGACGAACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNSTSFS*RRRTAP
Trigger: GGGAGCAGTTCGTCTACGGCATGAGAAGGAGGTGCT...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCGCTTCTTGTCTTCATaGAGCTCTCGGAGCTCACGC +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLRFLSS*SSRSSR
Trigger: GCGTGAGCTCCGAGAGCTGCATGAAGACAAGAAGCG...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATCGCTTCTTGTCTTCATaGAGCTCTCGGAGCTCACGC +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNRFLSS*SSRSSR
Trigger: GCGTGAGCTCCGAGAGCTGCATGAAGACAAGAAGCG...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATTCCTGCAGTCGCTCCTaGAGCTTATCTGCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNSCSRS*SLSARF
Trigger: GAAACGGGCAGATAAGCTGCAGGAGCGACTGCAGGA...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCAGCATCCATTTCTCCTaGTGTGTCTCTGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLSIHFS*CVSASR
Trigger: GCGGCTGGCAGAGACACAGCAGGAGAAATGGATGCT...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATACTGCTCACTTCCAGGTaGTTCACCTTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGILLTSR*FTFSSS
Trigger: GCTGGAGGAGAAGGTGAAGCACCTGGAAGTGAGCAG...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGGAGGTGGGTGCAGCCTaGAGGTCTTTAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILEVGAA*RSLAGF
Trigger: GAAACCAGCTAAAGACCTGCAGGCTGCACCCACCTC...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATGAGGTGGGTGCAGCCTaGAGGTCTTTAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNEVGAA*RSLAGF
Trigger: GAAACCAGCTAAAGACCTGCAGGCTGCACCCACCTC...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTAGAAGGAGAAATCCCTaGCCCTTCCCTCAGGATCCC +
Preference number: 4 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLIRRRNP*PFPQDP
Trigger: GGGATCCTGAGGGAAGGGGCAGGGATTTCTCCTTCT...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACGGGAAGGAGAGCTCATaGAGAGATGAAGACAGAAGC +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNGKESS*RDEDRS
Trigger: GCTTCTGTCTTCATCTCTGCATGAGCTCTCCTTCCC...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp GTCATTAAACAGAGTCTCCTTTTCTGTCTGCAGACGGCAAAAACTTTCTTGTTTCCTGGGGGATCCCCCTaGCCCTCACTGACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VIKQSLLFCLQTAKTFLFPGGSP*PSLTAE
Trigger: CTCAGCTGTCAGTGAGGGCCAGGGGGATCCCCCAGG...AAACAAGAAAGTTTTTGCCGTCTGCAGACAGAAAAGGAGACTCTGTTTAATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR CCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATTGGGTCTTTGCTGTTTaGATCTGCTCCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNWVFAV*ICSRAA
Trigger: GGCTGCCCTGGAGCAGATCCAAACAGCAAAGACCCA...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR CCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACAGCTCTTCCTTGTGCTaGGACTTCTCTTGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNSSSLC*DFSCSV
Trigger: AACGCTGCAAGAGAAGTCCCAGCACAAGGAAGAGCT...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATATGCTGGATAAGGACCTaGCTGGAACAGCCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGICWIRT*LEQPSS
Trigger: AGAGCTCGGCTGTTCCAGCCAGGTCCTTATCCAGCA...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTGCTGGATAAGGACCTaGCTGGAACAGCCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLICWIRT*LEQPSS
Trigger: AGAGCTCGGCTGTTCCAGCCAGGTCCTTATCCAGCA...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTGGCCAGATGGTATTTTaGCTGCATAGCCTTTACACA +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPGQMVF*LHSLYT
Trigger: TGTGTAAAGGCTATGCAGCCAAAATACCATCTGGCC...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTGGCCAGATGGTATTTTaGCTGCATAGCCTTTACACA +
Preference number: 4 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPGQMVF*LHSLYT
Trigger: TGTGTAAAGGCTATGCAGCCAAAATACCATCTGGCC...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATGGCCAGATGGTATTTTaGCTGCATAGCCTTTACACA +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINGQMVF*LHSLYT
Trigger: TGTGTAAAGGCTATGCAGCCAAAATACCATCTGGCC...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCGCCCGTCTGGCCAGATaGTATTTTGGCTGCATAGCC +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLARLAR*YFGCIA
Trigger: GGCTATGCAGCCAAAATACCATCTGGCCAGACGGGC...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCTCTGTCGAAGACTGGTaGGTTCAACACCATTCTTGC +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASSVEDW*VQHHSC
Trigger: GCAAGAATGGTGTTGAACTCACCAGTCTTCGACAGA...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGGCCAACTGGGCTTTGTaGTCAGCTTCCTTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILANWAL*SASFRC
Trigger: ACAACGGAAGGAAGCTGATCACAAAGCCCAGTTGGC...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCCAACTGGGCTTTGTaGTCAGCTTCCTTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGIANWAL*SASFRC
Trigger: ACAACGGAAGGAAGCTGATCACAAAGCCCAGTTGGC...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATGCCAACTGGGCTTTGTaGTCAGCTTCCTTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNANWAL*SASFRC
Trigger: ACAACGGAAGGAAGCTGATCACAAAGCCCAGTTGGC...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGGTGTTGCTAGAACGCTaGACATGGACCACACACCCA +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILVLLER*TWTTHP
Trigger: TGGGTGTGTGGTCCATGTTCAGCGTTCTAGCAACAC...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACGCTTCTGAGCTTTGCTaGACTCCTTATCCAAGTAGG +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNASELC*TPYPSR
Trigger: CCTACTTGGATAAGGAGTTCAGCAAAGCTCAGAAGC...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622599.4
CDS-3UTR GCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCCTTGCTCTTGCTCAGTaGCTTCTGAGCTTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASLALAQ*LLSFAE
Trigger: TTCAGCAAAGCTCAGAAGGCACTGAGCAAGAGCAAG...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATGTCTCCTTTTCTGTCTaGAGACGGCAAAAACTTTCT +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINVSFSV*RRQKLS
Trigger: AGAAAGTTTTTGCCGTCTGCAGACAGAAAAGGAGAC...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTGTCTCCTTTTCTGTCTaGAGACGGCAAAAACTTTCT +
Preference number: 4 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPVSFSV*RRQKLS
Trigger: AGAAAGTTTTTGCCGTCTGCAGACAGAAAAGGAGAC...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATACTGATCTCTCAGCTCTaGCAAGCTCTGATTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGILISQL*QALIGS
Trigger: GCTGCCAATCAGAGCTTGGCAGAGCTGAGAGATCAG...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACTTGTTCCTGTGCATCTaGACTCTGGATGGATACCTG +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNLFLCI*TLDGYL
Trigger: CAGGTATCCATCCAGAGTGCAGATGCACAGGAACAA...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR GCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACAATTCCTGGGTCAACTaGTCCTTCTCCTGCCCTATT +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNNSWVN*SFSCPI
Trigger: AATAGGGCAGGAGAAGGAGCAGTTGACCCAGGAATT...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGTTCTTCCACTGTCTaGTGGAGAGTCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNSSSTV*WRVSSS
Trigger: GGAGCTGGAGACTCTCCAGCAGACAGTGGAAGAACT...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCGTGTCCTTCACCTCCTaGTTCAGGCTGCTAATGGTC +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLVSFTS*FRLLMV
Trigger: GACCATTAGCAGCCTGAAGCAGGAGGTGAAGGACAC...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCTCCTGCAGCTTATCTaGCCGTTTCCGCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLLLQLI*PFPLQM
Trigger: CATTTGGAGCGGAAACGGGCAGATAAGCTGCAGGAG...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGCTGCCATGGAAGCACTaGTCACTTCCAGGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILLPWKH*SLPGAS
Trigger: TGAAGCACCTGGAAGTGAGCAGTGCTTCCATGGCAG...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACTCCTCCAGCATGTTCTaGAGCTTCTTGTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNSSSMF*SFLFIS
Trigger: GGAGATGAACAAGAAGCTGCAGAACATGCTGGAGGA...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATATTCTTGGTGAGCTaGTCCTCCAGCATGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGIFLVS*SSSMFC
Trigger: GCAGAACATGCTGGAGGAGCAGCTCACCAAGAATAT...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACATATTCTTGGTGAGCTaGTCCTCCAGCATGTTCTGC +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNIFLVS*SSSMFC
Trigger: GCAGAACATGCTGGAGGAGCAGCTCACCAAGAATAT...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATACTCCCTGGTGGCCTCTaGCCTAAGACAGGATCATTA +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGILPGGL*PKTGSL
Trigger: TAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCATCCCCAATCCCAAATaGAGAGTAGCCAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLIPNPK*RVARLQ
Trigger: CTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGAT...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGATCCCCAATCCCAAATaGAGAGTAGCCAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILIPNPK*RVARLQ
Trigger: CTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGAT...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATACCCTCCTTCAGTTGCTaGTTCTCTTGCTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGIPSFSC*FSCSSC
Trigger: ACAGCTGGAGCAAGAGAACCAGCAACTGAAGGAGGG...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCGTTCAAACCAGCCCTTaGCTCCATCCATGGAATGTA +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASVQTSP*LHPWNV
Trigger: TACATTCCATGGATGGAGCCAAGGGCTGGTTTGAAC...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCAGCCGCACAATTTCCTaGGACAGAACTTCCATATCC +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASSRTIS*DRTSIS
Trigger: GGATATGGAAGTTCTGTCCCAGGAAATTGTGCGGCT...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCGAAGACAGAAGCCCTTaGGAGCCAGGACCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLEDRSP*EPGPRR
Trigger: TCTTCTTGGTCCTGGCTCCCAAGGGCTTCTGTCTTC...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTAGTGCATATTCTTGGTaGGCTGCTCCTCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLISAYSW*AAPPAC
Trigger: ACATGCTGGAGGAGCAGCTCACCAAGAATATGCACT...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGGTCTCCCAAGCTATTTaGTTTTGGCTCCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILVSQAI*FWLQPS
Trigger: TGAGGGCTGGAGCCAAAATCAAATAGCTTGGGAGAC...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATGTTCAACACCATTCTTaGGTAGTTCATCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINVQHHS*VVHLKA
Trigger: AGCTTTCAGATGAACTACGCAAGAATGGTGTTGAAC...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGCTGGCTGTGCAGCTTTaGCTGCAGCATCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILLAVQL*LQHLIF
Trigger: GAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAG...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR GCA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTCTGGCTGTGCAGCTTTaGCTGCAGCATCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLILAVQL*LQHLIF
Trigger: GAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAG...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR GCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGGAGCTCTCTAAGCCTTaGAGCTGTTCCCAGAGCAAT +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILELSKP*SCSQSN
Trigger: ATTGCTCTGGGAACAGCTGCAAGGCTTAGAGAGCTC...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGAGCTCTCTAAGCCTTaGAGCTGTTCCCAGAGCAAT +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGIELSKP*SCSQSN
Trigger: ATTGCTCTGGGAACAGCTGCAAGGCTTAGAGAGCTC...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATACTGGATGTTTCGGCCTaGTTTGAGCTCTCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGILDVSA*FELSKP
Trigger: AGGCTTAGAGAGCTCAAAGCAGGCCGAAACATCCAG...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TTTCAGTTTCTCGGAGAGCTTAGCAAGTTCCTCCTGCAGCCTGGATGTTTCGGCGTCTCCTTTTCTGTCTaGAGACGGCAAAAACTTTCT +
Preference number: 4 (lower is better)
Translates to: FQFLGELSKFLLQPGCFGVSFSV*RRQKLS
Trigger: AGAAAGTTTTTGCCGTCTGCAGACAGAAAAGGAGAC...GCCGAAACATCCAGGCTGCAGGAGGAACTTGCTAAGCTCTCCGAGAAACTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR GCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGTTAGTGAGGATGTCCTaGAGTCGCTCCTGCAGCTTA +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILLVRMS*SRSCSL
Trigger: TAAGCTGCAGGAGCGACTGCAGGACATCCTCACTAA...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATATTAGTGAGGATGTCCTaGAGTCGCTCCTGCAGCTTA +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGILVRMS*SRSCSL
Trigger: TAAGCTGCAGGAGCGACTGCAGGACATCCTCACTAA...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGATATCCTTGTGCAAGTaGATATTCTTGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGISLCK*IFLVSC
Trigger: GCAGCTCACCAAGAATATGCACTTGCACAAGGATAT...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTGGGAAGGAGAGCTCATaGAGAGATGAAGACAGAAGC +
Preference number: 4 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLIGKESS*RDEDRS
Trigger: GCTTCTGTCTTCATCTCTGCATGAGCTCTCCTTCCC...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGCTGCAGGTCTTTAGCTaGTTTCTCCTGGCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILLQVFS*FLLALG
Trigger: ACCTAGAGCCAGGAGAAACCAGCTAAAGACCTGCAG...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATCTGCAGGTCTTTAGCTaGTTTCTCCTGGCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNLQVFS*FLLALG
Trigger: ACCTAGAGCCAGGAGAAACCAGCTAAAGACCTGCAG...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTCTGTCGAAGACTGGTaGGTTCAACACCATTCTTGC +
Preference number: 4 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLISVEDW*VQHHSC
Trigger: GCAAGAATGGTGTTGAACTCACCAGTCTTCGACAGA...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR TCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCTTCTGAGCTTTGCTaGACTCCTTATCCAAGTAGG +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLPSELC*TPYPSR
Trigger: CCTACTTGGATAAGGAGTTCAGCAAAGCTCAGAAGG...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR TCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGTTGCTCAGTGCCTTCTaGGCTTTGCTGAACTCCTTA +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILLLSAF*ALLNSL
Trigger: TAAGGAGTTCAGCAAAGCTCAGAAGGCACTGAGCAA...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR TCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCTTGCTCAGTGCCTTCTaGGCTTTGCTGAACTCCTTA +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLLLSAF*ALLNSL
Trigger: TAAGGAGTTCAGCAAAGCTCAGAAGGCACTGAGCAA...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR TCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAAATACCTCGACTTCCTaGGCTTTCTTGCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGINTSTS*AFLLLL
Trigger: GAGCAAGAGCAAGAAAGCTCAGGAAGTCGAGGTATT...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGGTTCAACACCATTCTTaGGTAGTTCATCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGVQHHS*VVHLKA
Trigger: AGCTTTCAGATGAACTACGCAAGAATGGTGTTGAAC...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTATTAGTGTGCTGTTCTaGAAACGGAAGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLIISVLF*KRKSSS
Trigger: GGAGGAGGACTTCCGTTTGCAGAACAGCACACTAAT...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR GCA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTACTCGGCCATTAGTGTaGTGTTCTGCAAACGGAAGT +
Preference number: 4 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLITRPLV*CSANGS
Trigger: ACTTCCGTTTGCAGAACAGCACACTAATGGCCGAGT...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCACTCGGCCATTAGTGTaGTGTTCTGCAAACGGAAGT +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLTRPLV*CSANGS
Trigger: ACTTCCGTTTGCAGAACAGCACACTAATGGCCGAGT...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR GCA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAGTCTCCTTTTCTGTCTaGAGACGGCAAAAACTTTCT +
Preference number: 4 (lower is better)
Translates to: PSYLILAPALIFPPQPKGVSFSV*RRQKLS
Trigger: AGAAAGTTTTTGCCGTCTGCAGACAGAAAAGGAGAC...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp GTCATTAAACAGAGTCTCCTTTTCTGTCTGCAGACGGCAAAAACTTTCTTGTTTGCCTCAAGTTCCTGCTaGAGCTTCTGGGTTCGAGCC +
Preference number: 4 (lower is better)
Translates to: VIKQSLLFCLQTAKTFLFASSSC*SFWVRA
Trigger: GGCTCGAACCCAGAAGCTGCAGCAGGAACTTGAGGC...AAACAAGAAAGTTTTTGCCGTCTGCAGACAGAAAAGGAGACTCTGTTTAATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR GCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATTTGTTCCTGTGCATCTaGACTCTGGATGGATACCTG +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNLFLCI*TLDGYL
Trigger: CAGGTATCCATCCAGAGTGCAGATGCACAGGAACAA...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCTTCCACTTGTTCCTGTaGATCTGCACTCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLFHLFL*ICTLDG
Trigger: TCCATCCAGAGTGCAGATGCACAGGAACAAGTGGAA...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR GCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAATTCCTGGGTCAACTaGTCCTTCTCCTGCCCTATT +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNNSWVN*SFSCPI
Trigger: AATAGGGCAGGAGAAGGAGCAGTTGACCCAGGAATT...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCTCCTCCAGCATGTTCTaGAGCTTCTTGTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLSSSMF*SFLFIS
Trigger: GGAGATGAACAAGAAGCTGCAGAACATGCTGGAGGA...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATATCCTCCAGCATGTTCTaGAGCTTCTTGTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGISSSMF*SFLFIS
Trigger: GGAGATGAACAAGAAGCTGCAGAACATGCTGGAGGA...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGATATTCTTGGTGAGCTaGTCCTCCAGCATGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILIFLVS*SSSMFC
Trigger: GCAGAACATGCTGGAGGAGCAGCTCACCAAGAATAT...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACATATCCTTGTGCAAGTaGATATTCTTGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNISLCK*IFLVSC
Trigger: GCAGCTCACCAAGAATATGCACTTGCACAAGGATAT...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGACTTCCATATCCTTGTaGAAGTGCATATTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGTSISL*KCIFLV
Trigger: CACCAAGAATATGCACTTGCACAAGGATATGGAAGT...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAGATGGTATTTTGGCTaGATAGCCTTTACACACACA +
Preference number: 4 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGRWYFG*IAFTHT
Trigger: TGTGTGTGTAAAGGCTATGCAGCCAAAATACCATCT...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACCAGTTCTTGGGTCTTTaGTGTTTGGATCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNQFLGL*CLDLIL
Trigger: CAAGATCAGATCCAAACAGCAAAGACCCAAGAACTG...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593475.5
CDS-3UTR CCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATACATCTGCACTCTGGATaGATACCTGATCTTGTAGGG +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGIHLHSG*IPDLVG
Trigger: CCCTACAAGATCAGGTATCCATCCAGAGTGCAGATG...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR CCA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTCCTTGGCTCCATCCATaGAATGTACCTGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLIPWLHP*NVPELE
Trigger: TTCAAGCTCAGGTACATTCCATGGATGGAGCCAAGG...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATACCTTGGCTCCATCCATaGAATGTACCTGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGIPWLHP*NVPELE
Trigger: TTCAAGCTCAGGTACATTCCATGGATGGAGCCAAGG...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCAGCCGCACAATTTCCTaGGACAGAACTTCCATATCC +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLSRTIS*DRTSIS
Trigger: GGATATGGAAGTTCTGTCCCAGGAAATTGTGCGGCT...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCCGCACAATTTCCTaGGACAGAACTTCCATATCC +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNSRTIS*DRTSIS
Trigger: GGATATGGAAGTTCTGTCCCAGGAAATTGTGCGGCT...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAAAAGAGTTGGTCTCTaGGAAGGAGAGCTCATGCAG +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNKRVGL*EGELMQ
Trigger: CTGCATGAGCTCTCCTTCCCAGAGACCAACTCTTTT...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCAAAAGAGTTGGTCTCTaGGAAGGAGAGCTCATGCAG +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLKRVGL*EGELMQ
Trigger: CTGCATGAGCTCTCCTTCCCAGAGACCAACTCTTTT...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CCA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTAAAAGAGTTGGTCTCTaGGAAGGAGAGCTCATGCAG +
Preference number: 4 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLIKRVGL*EGELMQ
Trigger: CTGCATGAGCTCTCCTTCCCAGAGACCAACTCTTTT...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCGTTCAACACCATTCTTaGGTAGTTCATCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LILAPALIFPPQPKGIASVQHHS*VVHLKA
Trigger: AGCTTTCAGATGAACTACGCAAGAATGGTGTTGAAC...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACACTTCCATATCCTTGTaGAAGTGCATATTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNTSISL*KCIFLV
Trigger: CACCAAGAATATGCACTTGCACAAGGATATGGAAGT...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCATATCCTTGTGCAAGTaGATATTCTTGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLISLCK*IFLVSC
Trigger: GCAGCTCACCAAGAATATGCACTTGCACAAGGATAT...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGATGGTATTTTGGCTaGATAGCCTTTACACACACA +
Preference number: 4 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNRWYFG*IAFTHT
Trigger: TGTGTGTGTAAAGGCTATGCAGCCAAAATACCATCT...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR GCA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAAGATGGTATTTTGGCTaGATAGCCTTTACACACACA +
Preference number: 4 (lower is better)
Translates to: SYLILAPALIFPPQPKGIRWYFG*IAFTHT
Trigger: TGTGTGTGTAAAGGCTATGCAGCCAAAATACCATCT...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS CCA 90 bp GGGCCCGGGCAGACCCCACACCCACAAGGGCACTTCAAGTGGGGATaGGCAGGCAGGCAGGCAGGCAGCACCTTCTCCTCCAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: GPGQTPHPQGHFKWG*AGRQAGSTFSSSIH
Trigger: ATGGATGCTGGAGGAGAAGGTGCTGCCTGCCTGCCTGCCTGCCCATCCCCACTTGAAGTGCCCTTGTGGGTGTGGGGTCTGCCCGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619149.4
CDS GCA 90 bp CGTCACCTGGCTTCACTAGGTCTCTCAGGACGCTGCCCAGCCCGCTaGGGTCTGTGTGGCCTGCTGCCACAGACACATCGATCCGGCTGT +
Preference number: 5 (lower is better)
Translates to: RHLASLGLSGRCPAR*GLCGLLPQTHRSGC
Trigger: ACAGCCGGATCGATGTGTCTGTGGCAGCAGGCCACACAGACCGCAGCGGGCTGGGCAGCGTCCTGAGAGACCTAGTGAAGCCAGGTGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS TCA 90 bp ATGGTCTTCAGGTGGCAGTCCCGCTCCTCCTGGGCCTGCTCGAGCTaGTCCCGTACATCCTGTAGCTCCTCCTCCTTGCCCTCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: MVFRWQSRSSWACSS*SRTSCSSSSLPSAS
Trigger: GGAAGCCGAGGGCAAGGAGGAGGAGCTACAGGATGTACGGGATCAGCTCGAGCAGGCCCAGGAGGAGCGGGACTGCCACCTGAAGACCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611757.4
ENST00000619107.1
CDS GCA 90 bp CCCGAAGGTTCTCGTCACCTGGCTTCACTAGGTCTCTCAGGACGCTaGCCAGCCCGCTGCGGTCTGTGTGGCCTGCTGCCACAGACACAT +
Preference number: 5 (lower is better)
Translates to: PEGSRHLASLGLSGR*PARCGLCGLLPQTH
Trigger: ATGTGTCTGTGGCAGCAGGCCACACAGACCGCAGCGGGCTGGGCAGCGTCCTGAGAGACCTAGTGAAGCCAGGTGACGAGAACCTTCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000619149.4
ENST00000622599.4
CDS CCA 90 bp TTCACTAGGTCTCTCAGGACGCTGCCCAGCCCGCTGCGGTCTGTGTaGCCTGCTGCCACAGACACATCTGCAAGGGCCCAGGCTGAAAAC +
Preference number: 5 (lower is better)
Translates to: FTRSLRTLPSPLRSV*PAATDTSARAQAEN
Trigger: GTTTTCAGCCTGGGCCCTTGCAGATGTGTCTGTGGCAGCAGGCCACACAGACCGCAGCGGGCTGGGCAGCGTCCTGAGAGACCTAGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619149.4
CDS TCA 90 bp CTGGAACAGCCGAGCTCTCCTTTTCCCGCAAGATCTCCCGGTAGCTaGAGGAGGAGATGCTACTGCTGTCCCCTGTCTGGGTCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: LEQPSSPFPARSPGS*RRRCYCCPLSGSGL
Trigger: CAAGCCGGACCCAGACAGGGGACAGCAGTAGCATCTCCTCCTTCAGCTACCGGGAGATCTTGCGGGAAAAGGAGAGCTCGGCTGTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000488361.1
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS GCA 90 bp TCCTGCAGTCGCTCCTGCAGCTTATCTGCCCGTTTCCGCTCCAAATaGAGCTGCCGCTTGAGGTCCTTGAGCGCAGCACTGCCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SCSRSCSLSARFRSK*SCRLRSLSAALPFF
Trigger: GAAGAAGGGCAGTGCTGCGCTCAAGGACCTCAAGCGGCAGCTGCATTTGGAGCGGAAACGGGCAGATAAGCTGCAGGAGCGACTGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS GCA 90 bp CCTGAGCGGCTCTTGCTGTTAGTGAGGATGTCCTGCAGTCGCTCCTaGAGCTTATCTGCCCGTTTCCGCTCCAAATGCAGCTGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: PERLLLLVRMSCSRS*SLSARFRSKCSCRL
Trigger: CAAGCGGCAGCTGCATTTGGAGCGGAAACGGGCAGATAAGCTGCAGGAGCGACTGCAGGACATCCTCACTAACAGCAAGAGCCGCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS GCA 90 bp AGCTCCTCAAGGCCTGAGCGGCTCTTGCTGTTAGTGAGGATGTCCTaGAGTCGCTCCTGCAGCTTATCTGCCCGTTTCCGCTCCAAATGC +
Preference number: 5 (lower is better)
Translates to: SSSRPERLLLLVRMS*SRSCSLSARFRSKC
Trigger: GCATTTGGAGCGGAAACGGGCAGATAAGCTGCAGGAGCGACTGCAGGACATCCTCACTAACAGCAAGAGCCGCTCAGGCCTTGAGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS-3UTR CAA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTGGCCCCACGCACTCCTaGCTGAGCCGCACAATTTCC +
Preference number: 5 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPGPTHS*LSRTIS
Trigger: GGAAATTGTGCGGCTCAGCAAGGAGTGCGTGGGGCC...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS GCA 90 bp ATCTGGCTGCAGAGCTTGCTGAACTCGGCCATTAGTGTGCTGTTCTaGAAACGGAAGTCCTCCTCCTGGCTGTGCAGCTTTGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: IWLQSLLNSAISVLF*KRKSSSWLCSFACS
Trigger: GCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGAACAGCACACTAATGGCCGAGTTCAGCAAGCTCTGCAGCCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000617369.4
CDS GCA 90 bp AGGTCATCTTTCTGTCCCATAAGGTCCTCGTACTCAGCCTGCTGCTaGTGCAACTCAGCTGCCAGCCCAGTGGTCTGTTCCCGGAGCATA +
Preference number: 5 (lower is better)
Translates to: RSSFCPIRSSYSACC*CNSAASPVVCSRSI
Trigger: TATGCTCCGGGAACAGACCACTGGGCTGGCAGCTGAGTTGCAGCAGCAGCAGGCTGAGTACGAGGACCTTATGGGACAGAAAGATGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000474512.1
ENST00000593475.5
ENST00000611757.4
ENST00000619149.4
ENST00000622599.4
CDS GCA 90 bp TTGAGGTCCTTGAGCGCAGCACTGCCCTTCTTCTCCAGGATCCTCTaGCCATCCACTGTGTCCTTCACCTCCTGCTTCAGGCTGCTAATG +
Preference number: 5 (lower is better)
Translates to: LRSLSAALPFFSRIL*PSTVSFTSCFRLLM
Trigger: CATTAGCAGCCTGAAGCAGGAGGTGAAGGACACAGTGGATGGGCAGAGGATCCTGGAGAAGAAGGGCAGTGCTGCGCTCAAGGACCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS GCA 90 bp CTTGCTGTTAGTGAGGATGTCCTGCAGTCGCTCCTGCAGCTTATCTaGCCGTTTCCGCTCCAAATGCAGCTGCCGCTTGAGGTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: LAVSEDVLQSLLQLI*PFPLQMQLPLEVLE
Trigger: CTCAAGGACCTCAAGCGGCAGCTGCATTTGGAGCGGAAACGGGCAGATAAGCTGCAGGAGCGACTGCAGGACATCCTCACTAACAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS GCA 90 bp CATGACGTAGGTCTCAATGATGGCGCTCTTCCGGCAGAGGTCCTCTaGCATGGAAGCACTGCTCACTTCCAGGTGCTTCACCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: HDVGLNDGALPAEVL*HGSTAHFQVLHLLL
Trigger: GAGGAGAAGGTGAAGCACCTGGAAGTGAGCAGTGCTTCCATGGCAGAGGACCTCTGCCGGAAGAGCGCCATCATTGAGACCTACGTCATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS CCA 90 bp GAGAGAAGCTGGAGCTGTAGGTTCTTCCTTTCCCCTTACCCTGGCTaGAACAGCCGAGCTCTCCTTTTCCCGCAAGATCTCCCGGTAGCT +
Preference number: 5 (lower is better)
Translates to: ERSWSCRFFLSPYPG*NSRALLFPQDLPVA
Trigger: AGCTACCGGGAGATCTTGCGGGAAAAGGAGAGCTCGGCTGTTCCAGCCAGGGTAAGGGGAAAGGAAGAACCTACAGCTCCAGCTTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473581.5
ENST00000488361.1
ENST00000611757.4
CDS-3UTR CAA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGTGTAGCTCCTCCTCCTaGCCCTTCAGCTCGGCAGCG +
Preference number: 5 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGCSSSS*PFSSAA
Trigger: CGCTGCCGAGCTGAAGGGCAAGGAGGAGGAGCTACA...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS GCA 90 bp CGTAGACGAACTGCTCCCAGCTCTTCCTTGTGCTGGGACTTCTCTTaGAGCGTTTCCATTGCTAGCTCATCCAGCATGGCCTTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: RRRTAPSSSLCWDFS*SVSIASSSSMAFRF
Trigger: GAAGCGGAAGGCCATGCTGGATGAGCTAGCAATGGAAACGCTGCAAGAGAAGTCCCAGCACAAGGAAGAGCTGGGAGCAGTTCGTCTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS GCA 90 bp CATGACGTAGGTCTCAATGATGGCGCTCTTCCGGCAGAGGTCCTCTaGCATGGAAGCACTGCTCACTTCCAGGTGCTTCACCTGCAAGAT +
Preference number: 5 (lower is better)
Translates to: HDVGLNDGALPAEVL*HGSTAHFQVLHLQD
Trigger: ATCTTGCAGGTGAAGCACCTGGAAGTGAGCAGTGCTTCCATGGCAGAGGACCTCTGCCGGAAGAGCGCCATCATTGAGACCTACGTCATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619149.4
CDS CCA 90 bp CCTCGTACTCAGCCTGCTGCTGCTGCAACTCAGCTGCCAGCCCAGTaGTCTGTTCCCGGAGCATATTCAGTTCTTGGGTCTTTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: PRTQPAAAATQLPAQ*SVPGAYSVLGSLLF
Trigger: AAACAGCAAAGACCCAAGAACTGAATATGCTCCGGGAACAGACCACTGGGCTGGCAGCTGAGTTGCAGCAGCAGCAGGCTGAGTACGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000474512.1
ENST00000593475.5
ENST00000611757.4
ENST00000619149.4
ENST00000622599.4
CDS CCA 90 bp GCTGGGACTTCTCTTGCAGCGTTTCCATTGCTAGCTCATCCAGCATaGCCTTCCGCTTCTCCGCACTCTTCCGAGCCTCCTGTAATTCCT +
Preference number: 5 (lower is better)
Translates to: AGTSLAAFPLLAHPA*PSASPHSSEPPVIP
Trigger: AGGAATTACAGGAGGCTCGGAAGAGTGCGGAGAAGCGGAAGGCCATGCTGGATGAGCTAGCAATGGAAACGCTGCAAGAGAAGTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS CCA 90 bp GCTCTGTGGAGACCAGGGGAGCCCATTTTACACCTCAGCCTCTCCTaGGGTGCATATAACCGTACAGACTCTCTGTTTGACCACCCAGCA +
Preference number: 5 (lower is better)
Translates to: ALWRPGEPILHLSLS*GAYNRTDSLFDHPA
Trigger: TGCTGGGTGGTCAAACAGAGAGTCTGTACGGTTATATGCACCCCAGGAGAGGCTGAGGTGTAAAATGGGCTCCCCTGGTCTCCACAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474512.1
CDS CCA 90 bp CCTCCTTGCCCTCGGCTTCCTTCAAGCGCCGTTCAAACCAGCCCTTaGCTCCATCCATGGAATGTACCTGAGCTTGAAGTTCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: PPCPRLPSSAVQTSP*LHPWNVPELEVLPL
Trigger: CAGTGGAAGAACTTCAAGCTCAGGTACATTCCATGGATGGAGCCAAGGGCTGGTTTGAACGGCGCTTGAAGGAAGCCGAGGGCAAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611757.4
ENST00000619107.1
CDS CCA 90 bp CTGCCATGGAAGCACTGCTCACTTCCAGGTGCTTCACCTGCAAGATaGCCCAGCCCACCTGAGACCCCTCTACTGTACATGTTCACACAT +
Preference number: 5 (lower is better)
Translates to: LPWKHCSLPGASPAR*PSPPETPLLYMFTH
Trigger: ATGTGTGAACATGTACAGTAGAGGGGTCTCAGGTGGGCTGGGCCATCTTGCAGGTGAAGCACCTGGAAGTGAGCAGTGCTTCCATGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619149.4
CDS-3UTR CAA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTAGCCCCCTCCTTCAGTaGCTGGTTCTCTTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPSPLLQ*LVLLLQ
Trigger: CTGGAGCAAGAGAACCAGCAACTGAAGGAGGGGGCT...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTGCTCCCGACACTGCTaGAGGGCTTCCTCTTGTTCC +
Preference number: 5 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPCSRHC*RASSCS
Trigger: GGAACAAGAGGAAGCCCTCAAGCAGTGTCGGGAGCA...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCTGTAGCTCCTCCTCCTaGCCCTTCAGCTCGGCAGCG +
Preference number: 5 (lower is better)
Translates to: LILAPALIFPPQPKGIASCSSSS*PFSSAA
Trigger: CGCTGCCGAGCTGAAGGGCAAGGAGGAGGAGCTACA...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAGGCCCCACGCACTCCTaGCTGAGCCGCACAATTTCC +
Preference number: 5 (lower is better)
Translates to: PSYLILAPALIFPPQPKGGPTHS*LSRTIS
Trigger: GGAAATTGTGCGGCTCAGCAAGGAGTGCGTGGGGCC...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS TCA 90 bp ACACAGTCAGCCCCATGGATCTCAGATGTAGTCAGCACCCAAGGATaGCAGTTTCACCCAGCCTCCCAATCCCAACCACCAGGGGTTTCA +
Preference number: 5 (lower is better)
Translates to: TQSAPWISDVVSTQG*QFHPASQSQPPGVS
Trigger: TGAAACCCCTGGTGGTTGGGATTGGGAGGCTGGGTGAAACTGTCATCCTTGGGTGCTGACTACATCTGAGATCCATGGGGCTGACTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474512.1
CDS GCA 90 bp ACCTCCTTCTCATGCCGTAGACGAACTGCTCCCAGCTCTTCCTTGTaGTGGGACTTCTCTTGCAGCGTTTCCATTGCTAGCTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: TSFSCRRRTAPSSSL*WDFSCSVSIASSSS
Trigger: GCTGGATGAGCTAGCAATGGAAACGCTGCAAGAGAAGTCCCAGCACAAGGAAGAGCTGGGAGCAGTTCGTCTACGGCATGAGAAGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS CCA 90 bp GCAGGGATTCCTCGGCTTCCTTCAAGCGCCGTTCAAACCAGCCCTTaGCTCCATCCATGGAATGTACCTGAGCTTGAAGTTCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: AGIPRLPSSAVQTSP*LHPWNVPELEVLPL
Trigger: CAGTGGAAGAACTTCAAGCTCAGGTACATTCCATGGATGGAGCCAAGGGCTGGTTTGAACGGCGCTTGAAGGAAGCCGAGGAATCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000619149.4
ENST00000622599.4
CDS-3UTR CAA 90 bp CCTGCTGCAGCTTCTGGGTTCGAGCCAACTGGGCTTTGTGATCAGCTTCCTTCCATGTTTCGGCCTGCTTaGAGCTCTCTAAGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: PAAASGFEPTGLCDQLPSMFRPA*SSLSLA
Trigger: TGCAAGGCTTAGAGAGCTCAAAGCAGGCCGAAACAT...GGAAGGAAGCTGATCACAAAGCCCAGTTGGCTCGAACCCAGAAGCTGCAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR CAA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTGGGTCTTTGCTGTTaGGATCTGCTCCAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPLGLCC*DLLQGS
Trigger: GCTGCCCTGGAGCAGATCCAAACAGCAAAGACCCAA...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR CAA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATTCCTGGAGCTGGGAGTaGAGGTCATCTTTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINSWSWE*RSSFCP
Trigger: GGGACAGAAAGATGACCTCAACTCCCAGCTCCAGGA...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTTCCAGCAGTCGACTATaGGCCCGTAATGACTCCTGG +
Preference number: 5 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPSSSRL*ARNDSW
Trigger: CCAGGAGTCATTACGGGCCAATAGTCGACTGCTGGA...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS CCA 90 bp TCCTTCTCATGCCGTAGACGAACTGCTCCCAGCTCTTCCTTGTGCTaGGACTTCTCTTGCAGCGTTTCCATTGCTAGCTCATCCAGCATG +
Preference number: 5 (lower is better)
Translates to: SFSCRRRTAPSSSLC*DFSCSVSIASSSSM
Trigger: CATGCTGGATGAGCTAGCAATGGAAACGCTGCAAGAGAAGTCCCAGCACAAGGAAGAGCTGGGAGCAGTTCGTCTACGGCATGAGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS CCA 90 bp ACAGACTCTCTGTTTGACCACCCAGCAGCATGTTCTCAGCACCTGTaGGTCTCAGACTATCCAGCCAACAGCAATCTCAGGTTCACCCAG +
Preference number: 5 (lower is better)
Translates to: TDSLFDHPAACSQHL*VSDYPANSNLRFTQ
Trigger: CTGGGTGAACCTGAGATTGCTGTTGGCTGGATAGTCTGAGACCCACAGGTGCTGAGAACATGCTGCTGGGTGGTCAAACAGAGAGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474512.1
CDS-3UTR CAA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTCCTGGCTGTGCAGCTTaGCCTGCAGCATCTCATTTT +
Preference number: 5 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPPGCAA*PAASHF
Trigger: AAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGG...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR CAA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACAGCCCCCTCCTTCAGTaGCTGGTTCTCTTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNSPLLQ*LVLLLQ
Trigger: CTGGAGCAAGAGAACCAGCAACTGAAGGAGGGGGCT...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACTGCTCCCGACACTGCTaGAGGGCTTCCTCTTGTTCC +
Preference number: 5 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNCSRHC*RASSCS
Trigger: GGAACAAGAGGAAGCCCTCAAGCAGTGTCGGGAGCA...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCAGGCCTGAGCGGCTCTaGCTGTTAGTGAGGATGTCC +
Preference number: 5 (lower is better)
Translates to: LILAPALIFPPQPKGIASRPERL*LLVRMS
Trigger: GGACATCCTCACTAACAGCAAGAGCCGCTCAGGCCT...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATTGCAAGTGCATATTCTaGGTGAGCTGCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINCKCIF*VSCSSS
Trigger: GCTGGAGGAGCAGCTCACCAAGAATATGCACTTGCA...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGGGCCCCACGCACTCCTaGCTGAGCCGCACAATTTCC +
Preference number: 5 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILGPTHS*LSRTIS
Trigger: GGAAATTGTGCGGCTCAGCAAGGAGTGCGTGGGGCC...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS GCA 90 bp TGTGCTGTTCTGCAAACGGAAGTCCTCCTCCTGGCTGTGCAGCTTTaGCTGCAGCATCTCATTTTCACTCAGCAATACCTCGACTTCCTG +
Preference number: 5 (lower is better)
Translates to: CAVLQTEVLLLAVQL*LQHLIFTQQYLDFL
Trigger: CAGGAAGTCGAGGTATTGCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGAACAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000611705.4
ENST00000611757.4
ENST00000617369.4
ENST00000622231.1
CDS GCA 90 bp GCCATTAGTGTGCTGTTCTGCAAACGGAAGTCCTCCTCCTGGCTGTaGAGCTTTGCCTGCAGCATCTCATTTTCACTCAGCAATACCTCG +
Preference number: 5 (lower is better)
Translates to: AISVLFCKRKSSSWL*SFACSISFSLSNTS
Trigger: CGAGGTATTGCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGAACAGCACACTAATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000611705.4
ENST00000611757.4
ENST00000617369.4
ENST00000622231.1
CDS-3UTR CAA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTAAAGCTGGTAGTTGTTaGTCCGGAGTTCCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPKAGSC*SGVPGA
Trigger: AGCTCCTGGAACTCCGGACAAACAACTACCAGCTTT...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTATGTTTCGGCCTGCTTaGAGCTCTCTAAGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPMFRPA*SSLSLA
Trigger: TGCAAGGCTTAGAGAGCTCAAAGCAGGCCGAAACAT...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATCAAAAGCCCTTCCACTaGTTCCTGTGCATCTGCACT +
Preference number: 5 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINQKPFH*FLCICT
Trigger: AGTGCAGATGCACAGGAACAAGTGGAAGGGCTTTTG...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR CAA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTCTAGTCCTCAAGGCATaGTTCTCAGCCAAAAGCCCT +
Preference number: 5 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPLVLKA*FSAKSP
Trigger: AGGGCTTTTGGCTGAGAACAATGCCTTGAGGACTAG...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR CAA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGATCCTGGAGCTGGGAGTaGAGGTCATCTTTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: PSYLILAPALIFPPQPKGSWSWE*RSSFCP
Trigger: GGGACAGAAAGATGACCTCAACTCCCAGCTCCAGGA...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp CCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGATCCAGCAGTCGACTATaGGCCCGTAATGACTCCTGG +
Preference number: 5 (lower is better)
Translates to: PSYLILAPALIFPPQPKGSSSRL*ARNDSW
Trigger: CCAGGAGTCATTACGGGCCAATAGTCGACTGCTGGA...TCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS GCA 90 bp TTGTGCAAGTGCATATTCTTGGTGAGCTGCTCCTCCAGCATGTTCTaGAGCTTCTTGTTCATCTCCCGAAGGTTCTCGTCACCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: LCKCIFLVSCSSSMF*SFLFISRRFSSPGF
Trigger: GAAGCCAGGTGACGAGAACCTTCGGGAGATGAACAAGAAGCTGCAGAACATGCTGGAGGAGCAGCTCACCAAGAATATGCACTTGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000619149.4
ENST00000622599.4
CDS GCA 90 bp CCTTCAACCCCTCAGGTGGCAGAGTCCCTGTGCCAAATGACCACATaGCTAAAAGACGAAGGTTCAGCTCTATCCATGCCTCTCACATTT +
Preference number: 5 (lower is better)
Translates to: PSTPQVAESLCQMTT*LKDEGSALSMPLTF
Trigger: AAATGTGAGAGGCATGGATAGAGCTGAACCTTCGTCTTTTAGGCATGTGGTCATTTGGCACAGGGACTCTGCCACCTGAGGGGTTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473581.5
CDS CCA 90 bp AACTCGGCCATTAGTGTGCTGTTCTGCAAACGGAAGTCCTCCTCCTaGCTGTGCAGCTTTGCCTGCAGCATCTCATTTTCACTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: NSAISVLFCKRKSSS*LCSFACSISFSLSN
Trigger: ATTGCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGAACAGCACACTAATGGCCGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000611757.4
ENST00000617369.4
ENST00000622231.1
CDS-3UTR CAA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACCCTGGCTGTGCAGCTTaGCCTGCAGCATCTCATTTT +
Preference number: 5 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNPGCAA*PAASHF
Trigger: AAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGG...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR CAA 90 bp TTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGCATCCATCTGGCTGCAGAGCTaGCTGAACTCGGCCATTAGT +
Preference number: 5 (lower is better)
Translates to: LILAPALIFPPQPKGIASIWLQS*LNSAIS
Trigger: ACTAATGGCCGAGTTCAGCAAGCTCTGCAGCCAGAT...GGATGCTATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR CAA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAAGCCCCCTCCTTCAGTaGCTGGTTCTCTTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: SYLILAPALIFPPQPKGISPLLQ*LVLLLQ
Trigger: CTGGAGCAAGAGAACCAGCAACTGAAGGAGGGGGCT...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp CCCACCCAGCATCCCCAATCCCAAATGCAGAGTAGCCAGGCTCCAGACATAAATGGAATGTACCTGAGCTaGAAGTTCTTCCACTGTCTG +
Preference number: 5 (lower is better)
Translates to: PTQHPQSQMQSSQAPDINGMYLS*KFFHCL
Trigger: CAGACAGTGGAAGAACTTCAAGCTCAGGTACATTCC...ATTTATGTCTGGAGCCTGGCTACTCTGCATTTGGGATTGGGGATGCTGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTGCTCCCGACACTGCTaGAGGGCTTCCTCTTGTTCC +
Preference number: 5 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLICSRHC*RASSCS
Trigger: GGAACAAGAGGAAGCCCTCAAGCAGTGTCGGGAGCA...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAAATGCAGCTGCCGCTaGAGGTCCTTGAGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNKCSCR*RSLSAA
Trigger: TGCTGCGCTCAAGGACCTCAAGCGGCAGCTGCATTT...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGAGGCCTGAGCGGCTCTaGCTGTTAGTGAGGATGTCC +
Preference number: 5 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILRPERL*LLVRMS
Trigger: GGACATCCTCACTAACAGCAAGAGCCGCTCAGGCCT...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAAGGCCTGAGCGGCTCTaGCTGTTAGTGAGGATGTCC +
Preference number: 5 (lower is better)
Translates to: SYLILAPALIFPPQPKGIRPERL*LLVRMS
Trigger: GGACATCCTCACTAACAGCAAGAGCCGCTCAGGCCT...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACTGCAAGTGCATATTCTaGGTGAGCTGCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNCKCIF*VSCSSS
Trigger: GCTGGAGGAGCAGCTCACCAAGAATATGCACTTGCA...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS TCA 90 bp TCCTGTAATTCCTGGGTCAACTGCTCCTTCTCCTGCCCTATTTCTTaGAGTTGTTCCAGCAGTCGACTATTGGCCCGTAATGACTCCTGG +
Preference number: 5 (lower is better)
Translates to: SCNSWVNCSFSCPIS*SCSSSRLLARNDSW
Trigger: CCAGGAGTCATTACGGGCCAATAGTCGACTGCTGGAACAACTTCAAGAAATAGGGCAGGAGAAGGAGCAGTTGACCCAGGAATTACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000474512.1
ENST00000593475.5
ENST00000611757.4
ENST00000619149.4
ENST00000622599.4
CDS-3UTR CAA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACAAAGCTGGTAGTTGTTaGTCCGGAGTTCCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNKAGSC*SGVPGA
Trigger: AGCTCCTGGAACTCCGGACAAACAACTACCAGCTTT...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACCAAAAGCCCTTCCACTaGTTCCTGTGCATCTGCACT +
Preference number: 5 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNQKPFH*FLCICT
Trigger: AGTGCAGATGCACAGGAACAAGTGGAAGGGCTTTTG...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR CAA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATATTGGGTCTTTGCTGTTaGGATCTGCTCCAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SYLILAPALIFPPQPKGILGLCC*DLLQGS
Trigger: GCTGCCCTGGAGCAGATCCAAACAGCAAAGACCCAA...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR CAA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGTCCTGGAGCTGGGAGTaGAGGTCATCTTTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILSWSWE*RSSFCP
Trigger: GGGACAGAAAGATGACCTCAACTCCCAGCTCCAGGA...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp AGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATATCCAGCAGTCGACTATaGGCCCGTAATGACTCCTGG +
Preference number: 5 (lower is better)
Translates to: SYLILAPALIFPPQPKGISSSRL*ARNDSW
Trigger: CCAGGAGTCATTACGGGCCAATAGTCGACTGCTGGA...TATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp CCAACTGGGCTTTGTGATCAGCTTCCTTCCGTTGTTGTAATTCCTCAATCTTGTGCGTTCCTGCAGGGCTaGCTGAACTCGGCCATTAGT +
Preference number: 5 (lower is better)
Translates to: PTGLCDQLPSVVVIPQSCAFLQG*LNSAIS
Trigger: ACTAATGGCCGAGTTCAGCAAGCCCTGCAGGAACGC...ACAAGATTGAGGAATTACAACAACGGAAGGAAGCTGATCACAAAGCCCAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR CAA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTAGTTCAACACCATTCTaGCGTAGTTCATCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPSSTPF*RSSSES
Trigger: GCTTTCAGATGAACTACGCAAGAATGGTGTTGAACT...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCATCTGGCTGCAGAGCTaGCTGAACTCGGCCATTAGT +
Preference number: 5 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLIWLQS*LNSAIS
Trigger: ACTAATGGCCGAGTTCAGCAAGCTCTGCAGCCAGAT...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000593475.5
CDS-3UTR CAA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACTCAGTTCTTGGGTCTTaGCTGTTTGGATCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNSVLGS*LFGSAP
Trigger: TGGAGCAGATCCAAACAGCAAAGACCCAAGAACTGA...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR CAA 90 bp GGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTGAGCATATTCAGTTCTaGGGTCTTTGCTGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: GLCPKTGSLTLTIRPLAPEHIQF*GLCCLD
Trigger: ATCCAAACAGCAAAGACCCAAGAACTGAATATGCTC...AGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTCCCTATTTCTTGAAGTaGTTCCAGCAGTCGACTATT +
Preference number: 5 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPPYFLK*FQQSTI
Trigger: AATAGTCGACTGCTGGAACAACTTCAAGAAATAGGG...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACGGAATGTACCTGAGCTaGAAGTTCTTCCACTGTCTG +
Preference number: 5 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNGMYLS*KFFHCL
Trigger: CAGACAGTGGAAGAACTTCAAGCTCAGGTACATTCC...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTGCAAGTGCATATTCTaGGTGAGCTGCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLICKCIF*VSCSSS
Trigger: GCTGGAGGAGCAGCTCACCAAGAATATGCACTTGCA...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTAAAGCTGGTAGTTGTTaGTCCGGAGTTCCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLIKAGSC*SGVPGA
Trigger: AGCTCCTGGAACTCCGGACAAACAACTACCAGCTTT...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTATGTTTCGGCCTGCTTaGAGCTCTCTAAGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLIMFRPA*SSLSLA
Trigger: TGCAAGGCTTAGAGAGCTCAAAGCAGGCCGAAACAT...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGATGTTTCGGCCTGCTTaGAGCTCTCTAAGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILMFRPA*SSLSLA
Trigger: TGCAAGGCTTAGAGAGCTCAAAGCAGGCCGAAACAT...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp TCGGAGAGCTTAGCAAGTTCCTCCTGCAGCCTGGATGTTTCGGCCTGCTTTGAGTGTAATTCCTCAATCTaGTTCCTGCTGTCATTAAAC +
Preference number: 5 (lower is better)
Translates to: SESLASSSCSLDVSACFECNSSI*FLLSLN
Trigger: GTTTAATGACAGCAGGAACAAGATTGAGGAATTACA...CTCAAAGCAGGCCGAAACATCCAGGCTGCAGGAGGAACTTGCTAAGCTCTCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621664.1
CDS-3UTR CAA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGCTAGTCCTCAAGGCATaGTTCTCAGCCAAAAGCCCT +
Preference number: 5 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILLVLKA*FSAKSP
Trigger: AGGGCTTTTGGCTGAGAACAATGCCTTGAGGACTAG...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR CAA 90 bp CCCAAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGCCAAGCTATTTGATTTaGGCTCCAGCCCTCATTTTT +
Preference number: 5 (lower is better)
Translates to: PKLFDFGSSPHFSTTAQGPSYLI*APALIF
Trigger: AAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG...CCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACAGTTCAACACCATTCTaGCGTAGTTCATCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNSSTPF*RSSSES
Trigger: GCTTTCAGATGAACTACGCAAGAATGGTGTTGAACT...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp CTCCCTGGTGGCCTCTGCCCTAAGACAGGATCATTAACACTAACCATCAGGCCTTGTAATTCCTCAATCTaGTTCCTGCTGTCATTAAAC +
Preference number: 5 (lower is better)
Translates to: LPGGLCPKTGSLTLTIRPCNSSI*FLLSLN
Trigger: GTTTAATGACAGCAGGAACAAGATTGAGGAATTACA...AGGCCTGATGGTTAGTGTTAATGATCCTGTCTTAGGGCAGAGGCCACCAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATTCAGTTCTTGGGTCTTaGCTGTTTGGATCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNSVLGS*LFGSAP
Trigger: TGGAGCAGATCCAAACAGCAAAGACCCAAGAACTGA...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376423.8
ENST00000622599.4
CDS-3UTR CAA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCATGTTCTGCAGCTTCTaGTTCATCTCCCGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLMFCSF*FISRRF
Trigger: GAACCTTCGGGAGATGAACAAGAAGCTGCAGAACAT...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATATGTTCTGCAGCTTCTaGTTCATCTCCCGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNMFCSF*FISRRF
Trigger: GAACCTTCGGGAGATGAACAAGAAGCTGCAGAACAT...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTATGTTCTGCAGCTTCTaGTTCATCTCCCGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLIMFCSF*FISRRF
Trigger: GAACCTTCGGGAGATGAACAAGAAGCTGCAGAACAT...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS TCA 90 bp GGACAAATACAGGGAAACAAGGACAGATACAGCAACACATGGCAGTaGGGTAGTAGCAGATGTAAAGGCACACAAAGAAAGAAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: GQIQGNKDRYSNTWQ*GSSRCKGTQRKKGQ
Trigger: CTGGCCTTTCTTTCTTTGTGTGCCTTTACATCTGCTACTACCTCACTGCCATGTGTTGCTGTATCTGTCCTTGTTTCCCTGTATTTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480041.1
CDS-3UTR CAA 90 bp TGGCTGCATAGCCTTTACACACACACACACACACGTGTTGCTAGAACGCTGAACAGAACTTCCATATCCTaGTGCAAGTGCATATTCTTG +
Preference number: 5 (lower is better)
Translates to: WLHSLYTHTHTRVARTLNRTSIS*CKCIFL
Trigger: CAAGAATATGCACTTGCACAAGGATATGGAAGTTCT...GTTCAGCGTTCTAGCAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS TCA 90 bp AGGATAACTAACTTGTGGAACTGGAAAGATGCACATGACTGTATGTaGAGCACAGAGCACACAGAAAGTCCTCAGCACATGTTGGTCAGT +
Preference number: 5 (lower is better)
Translates to: RITNLWNWKDAHDCM*STEHTESPQHMLVS
Trigger: ACTGACCAACATGTGCTGAGGACTTTCTGTGTGCTCTGTGCTTCACATACAGTCATGTGCATCTTTCCAGTTCCACAAGTTAGTTATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619149.4
CDS CCA 90 bp TACAGAGAAGGAAAACAATATAGACAGCGAGACAAGATGAAGGAGTaGGGTGAAAAAGAGAAACGGAGAAGAGAGAAGGGAGAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: YREGKQYRQRDKMKE*GEKEKRRREKGERE
Trigger: CTCTCTCTCTCCCTTCTCTCTTCTCCGTTTCTCTTTTTCACCCCACTCCTTCATCTTGTCTCGCTGTCTATATTGTTTTCCTTCTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619149.4
CDS-3UTR CAA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGGAGCATATTCAGTTCTaGGGTCTTTGCTGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILEHIQF*GLCCLD
Trigger: ATCCAAACAGCAAAGACCCAAGAACTGAATATGCTC...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATGAGCATATTCAGTTCTaGGGTCTTTGCTGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNEHIQF*GLCCLD
Trigger: ATCCAAACAGCAAAGACCCAAGAACTGAATATGCTC...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTCCCTATTTCTTGAAGTaGTTCCAGCAGTCGACTATT +
Preference number: 5 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLIPYFLK*FQQSTI
Trigger: AATAGTCGACTGCTGGAACAACTTCAAGAAATAGGG...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp CTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTCCAAGCTATTTGATTTaGGCTCCAGCCCTCATTTTT +
Preference number: 5 (lower is better)
Translates to: LTIRPLAPLMSSLPSYLIPSYLI*APALIF
Trigger: AAAAATGAGGGCTGGAGCCAAAATCAAATAGCTTGG...AATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp ACAGGATCATTAACACTAACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCTCAGTTCTTGGGTCTTaGCTGTTTGGATCTGATCTT +
Preference number: 5 (lower is better)
Translates to: TGSLTLTIRPLAPLMSSLSVLGS*LFGSDL
Trigger: AAGATCAGATCCAAACAGCAAAGACCCAAGAACTGA...GAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGTTAGTGTTAATGATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593475.5
CDS-3UTR CAA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGAGAACTTCCATATCCTaGTGCAAGTGCATATTCTTG +
Preference number: 5 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILRTSIS*CKCIFL
Trigger: CAAGAATATGCACTTGCACAAGGATATGGAAGTTCT...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp AAGCTATTTGATTTTGGCTCCAGCCCTCATTTTTCCACCACAGCCCAAGGGAATAGAACTTCCATATCCTaGTGCAAGTGCATATTCTTG +
Preference number: 5 (lower is better)
Translates to: KLFDFGSSPHFSTTAQGNRTSIS*CKCIFL
Trigger: CAAGAATATGCACTTGCACAAGGATATGGAAGTTCT...ATTCCCTTGGGCTGTGGTGGAAAAATGAGGGCTGGAGCCAAAATCAAATAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS-3UTR CAA 90 bp ACCATCAGGCCTCTAGCCCCTTTAATGTCCAGTCTCCCAAGCTATTTGATTTTGTGTAATTCCTCAATCTaGTTCCTGCTGTCATTAAAC +
Preference number: 5 (lower is better)
Translates to: TIRPLAPLMSSLPSYLILCNSSI*FLLSLN
Trigger: GTTTAATGACAGCAGGAACAAGATTGAGGAATTACA...CAAAATCAAATAGCTTGGGAGACTGGACATTAAAGGGGCTAGAGGCCTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS CCA 72 bp CCCGGGCAGACCCCACACCCACAAGGGCACTTCAAGTaGGGATGGGCAGGCAGGCAGGCAGGCAGCACCTTC +
Preference number: 6 (lower is better)
Translates to: PGQTPHPQGHFK*GWAGRQAGSTF
Trigger: GAAGGTGCTGCCTGCCTGCCTGCCTGCCCATCCCCACTTGAAGTGCCCTTGTGGGTGTGGGGTCTGCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619149.4
CDS CCA 72 bp TCTCTCAGGACGCTGCCCAGCCCGCTGCGGTCTGTGTaGCCTGCTGCCACAGACACATCGATCCGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: SLRTLPSPLRSV*PAATDTSIRLS
Trigger: GGACAGCCGGATCGATGTGTCTGTGGCAGCAGGCCACACAGACCGCAGCGGGCTGGGCAGCGTCCTGAGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS CCA 72 bp TCTCTCAGGACGCTGCCCAGCCCGCTGCGGTCTGTGTaGCCTGCTGCCACAGACACATCTGCAAGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: SLRTLPSPLRSV*PAATDTSARAQ
Trigger: CTGGGCCCTTGCAGATGTGTCTGTGGCAGCAGGCCACACAGACCGCAGCGGGCTGGGCAGCGTCCTGAGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619149.4
CDS TCA 72 bp AGGTGGCAGTCCCGCTCCTCCTGGGCCTGCTCGAGCTaGTCCCGTACATCCTGTAGCTCCTCCTCCTTGCCC +
Preference number: 6 (lower is better)
Translates to: RWQSRSSWACSS*SRTSCSSSSLP
Trigger: GGGCAAGGAGGAGGAGCTACAGGATGTACGGGATCAGCTCGAGCAGGCCCAGGAGGAGCGGGACTGCCACCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS TCA 72 bp GCCTGCTGCCACAGACACATCTGCAAGGGCCCAGGCTaGAAACCACCCCCTCGGCAGAGCCAGAGGAGAGCC +
Preference number: 6 (lower is better)
Translates to: ACCHRHICKGPG*KPPPRQSQRRA
Trigger: GGCTCTCCTCTGGCTCTGCCGAGGGGGTGGTTTTCAGCCTGGGCCCTTGCAGATGTGTCTGTGGCAGCAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619149.4
CDS GCA 72 bp ACAGCTCTGCTGGCCGAGGGGGCTGGGCTTGAGGGCTaGTGGATAAGGACCTGGCTGGAACAGCCGAGCTCT +
Preference number: 6 (lower is better)
Translates to: TALLAEGAGLEG*WIRTWLEQPSS
Trigger: AGAGCTCGGCTGTTCCAGCCAGGTCCTTATCCAGCAGCCCTCAAGCCCAGCCCCCTCGGCCAGCAGAGCTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS GCA 72 bp GACGCTGCCCAGCCCGCTGCGGTCTGTGTGGCCTGCTaGCACAGACACATCGATCCGGCTGTCCATGACGTA +
Preference number: 6 (lower is better)
Translates to: DAAQPAAVCVAC*HRHIDPAVHDV
Trigger: TACGTCATGGACAGCCGGATCGATGTGTCTGTGGCAGCAGGCCACACAGACCGCAGCGGGCTGGGCAGCGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000622599.4
CDS GCA 72 bp TCTCGTCACCTGGCTTCACTAGGTCTCTCAGGACGCTaGCCAGCCCGCTGCGGTCTGTGTGGCCTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: SRHLASLGLSGR*PARCGLCGLLP
Trigger: TGGCAGCAGGCCACACAGACCGCAGCGGGCTGGGCAGCGTCCTGAGAGACCTAGTGAAGCCAGGTGACGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000619149.4
ENST00000622599.4
CDS CCA 72 bp CAGACCCCACACCCACAAGGGCACTTCAAGTGGGGATaGGCAGGCAGGCAGGCAGGCAGCACCTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: QTPHPQGHFKWG*AGRQAGSTFSS
Trigger: GGAGGAGAAGGTGCTGCCTGCCTGCCTGCCTGCCCATCCCCACTTGAAGTGCCCTTGTGGGTGTGGGGTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619149.4
CDS TCA 72 bp TGCCAGCCGCTGAAAGAGCTCAGCCACTTCCTCATCTaGCAGCTCTGCTGGCCGAGGGGGCTGGGCTTGAGG +
Preference number: 6 (lower is better)
Translates to: CQPLKELSHFLI*QLCWPRGLGLR
Trigger: CCTCAAGCCCAGCCCCCTCGGCCAGCAGAGCTGTCAGATGAGGAAGTGGCTGAGCTCTTTCAGCGGCTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS CCA 72 bp AGGGGAGGAGGTGGGTGCAGCCTGCAGGTCTTTAGCTaGTTTCTCCTGGCTCTAGGTCTGGGTCAGGAGGCC +
Preference number: 6 (lower is better)
Translates to: RGGGGCSLQVFS*FLLALGLGQEA
Trigger: GGCCTCCTGACCCAGACCTAGAGCCAGGAGAAACCAGCTAAAGACCTGCAGGCTGCACCCACCTCCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000619149.4
ENST00000622599.4
CDS GCA 72 bp CGCTCCTGCAGCTTATCTGCCCGTTTCCGCTCCAAATaGAGCTGCCGCTTGAGGTCCTTGAGCGCAGCACTG +
Preference number: 6 (lower is better)
Translates to: RSCSLSARFRSK*SCRLRSLSAAL
Trigger: CAGTGCTGCGCTCAAGGACCTCAAGCGGCAGCTGCATTTGGAGCGGAAACGGGCAGATAAGCTGCAGGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS GCA 72 bp CGCTCTTCCGGCAGAGGTCCTCTGCCATGGAAGCACTaGTCACTTCCAGGTGCTTCACCTGCAAGATGGCCC +
Preference number: 6 (lower is better)
Translates to: RSSGRGPLPWKH*SLPGASPARWP
Trigger: GGGCCATCTTGCAGGTGAAGCACCTGGAAGTGAGCAGTGCTTCCATGGCAGAGGACCTCTGCCGGAAGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619149.4
CDS TCA 72 bp TTCTCCTCCCGGATCTGCCCACGGAGCTCCTCCTCCTaGCGCTTCTTGTCTTCATGCAGCTCTCGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: FSSRICPRSSSS*RFLSSCSSRSS
Trigger: TGAGCTCCGAGAGCTGCATGAAGACAAGAAGCGTCAGGAGGAGGAGCTCCGTGGGCAGATCCGGGAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS TCA 72 bp CCGAGCTCTCCTTTTCCCGCAAGATCTCCCGGTAGCTaGAGGAGGAGATGCTACTGCTGTCCCCTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: PSSPFPARSPGS*RRRCYCCPLSG
Trigger: CCCAGACAGGGGACAGCAGTAGCATCTCCTCCTTCAGCTACCGGGAGATCTTGCGGGAAAAGGAGAGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000488361.1
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS GCA 72 bp TGCAGCTTATCTGCCCGTTTCCGCTCCAAATGCAGCTaGCGCTTGAGGTCCTTGAGCGCAGCACTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: CSLSARFRSKCS*RLRSLSAALPF
Trigger: GAAGGGCAGTGCTGCGCTCAAGGACCTCAAGCGGCAGCTGCATTTGGAGCGGAAACGGGCAGATAAGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS GCA 72 bp AGGCCTGAGCGGCTCTTGCTGTTAGTGAGGATGTCCTaGAGTCGCTCCTGCAGCTTATCTGCCCGTTTCCGC +
Preference number: 6 (lower is better)
Translates to: RPERLLLLVRMS*SRSCSLSARFR
Trigger: GCGGAAACGGGCAGATAAGCTGCAGGAGCGACTGCAGGACATCCTCACTAACAGCAAGAGCCGCTCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS GCA 72 bp TTCTGTCCCATAAGGTCCTCGTACTCAGCCTGCTGCTaGTGCAACTCAGCTGCCAGCCCAGTGGTCTGTTCC +
Preference number: 6 (lower is better)
Translates to: FCPIRSSYSACC*CNSAASPVVCS
Trigger: GGAACAGACCACTGGGCTGGCAGCTGAGTTGCAGCAGCAGCAGGCTGAGTACGAGGACCTTATGGGACAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000474512.1
ENST00000593475.5
ENST00000611757.4
ENST00000619149.4
ENST00000622599.4
CDS GCA 72 bp TTGAGCGCAGCACTGCCCTTCTTCTCCAGGATCCTCTaGCCATCCACTGTGTCCTTCACCTCCTGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: LSAALPFFSRIL*PSTVSFTSCFR
Trigger: CCTGAAGCAGGAGGTGAAGGACACAGTGGATGGGCAGAGGATCCTGGAGAAGAAGGGCAGTGCTGCGCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS GCA 72 bp AGTGAGGATGTCCTGCAGTCGCTCCTGCAGCTTATCTaGCCGTTTCCGCTCCAAATGCAGCTGCCGCTTGAG +
Preference number: 6 (lower is better)
Translates to: SEDVLQSLLQLI*PFPLQMQLPLE
Trigger: CTCAAGCGGCAGCTGCATTTGGAGCGGAAACGGGCAGATAAGCTGCAGGAGCGACTGCAGGACATCCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS CCA 72 bp CAGCCTGCTGCTGCTGCAACTCAGCTGCCAGCCCAGTaGTCTGTTCCCGGAGCATATTCAGTTCTTGGGTCT +
Preference number: 6 (lower is better)
Translates to: QPAAAATQLPAQ*SVPGAYSVLGS
Trigger: AGACCCAAGAACTGAATATGCTCCGGGAACAGACCACTGGGCTGGCAGCTGAGTTGCAGCAGCAGCAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000474512.1
ENST00000593475.5
ENST00000611757.4
ENST00000619149.4
ENST00000622599.4
CDS CAA 72 bp TTATCTGCCCGTTTCCGCTCCAAATGCAGCTGCCGCTaGAGGTCCTTGAGCGCAGCACTGCCCTTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: LSARFRSKCSCR*RSLSAALPFFS
Trigger: GGAGAAGAAGGGCAGTGCTGCGCTCAAGGACCTCAAGCGGCAGCTGCATTTGGAGCGGAAACGGGCAGATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS CAA 90 bp CTCAGCTGCCAGCCCAGTGGTCTGTTCCCGGAGCATATTCAGTTCTaGGGTCTTTGCTGTTTGGATCTGCTCCAGGGCAGCCAGGCTAGT +
Preference number: 6 (lower is better)
Translates to: LSCQPSGLFPEHIQF*GLCCLDLLQGSQAS
Trigger: ACTAGCCTGGCTGCCCTGGAGCAGATCCAAACAGCAAAGACCCAAGAACTGAATATGCTCCGGGAACAGACCACTGGGCTGGCAGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000474512.1
ENST00000611757.4
ENST00000619149.4
ENST00000622599.4
CDS CAA 90 bp CTCCCAGCTCTTCCTTGTGCTGGGACTTCTCTTGCAGCGTTTCCATaGCTAGCTCATCCAGCATGGCCTTCCGCTTCTCCGCACTCTTCC +
Preference number: 6 (lower is better)
Translates to: LPALPCAGTSLAAFP*LAHPAWPSASPHSS
Trigger: GGAAGAGTGCGGAGAAGCGGAAGGCCATGCTGGATGAGCTAGCAATGGAAACGCTGCAAGAGAAGTCCCAGCACAAGGAAGAGCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS TCA 72 bp CTAGGTCTGGGTCAGGAGGCCCCACGCACTCCTTGCTaGGCCGCACAATTTCCTGGGACAGAACTTCCATAT +
Preference number: 6 (lower is better)
Translates to: LGLGQEAPRTPC*AAQFPGTELPY
Trigger: ATATGGAAGTTCTGTCCCAGGAAATTGTGCGGCTCAGCAAGGAGTGCGTGGGGCCTCCTGACCCAGACCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000619149.4
ENST00000622599.4
CDS GCA 72 bp TCTTTCTGTCCCATAAGGTCCTCGTACTCAGCCTGCTaGTGCTGCAACTCAGCTGCCAGCCCAGTGGTCTGT +
Preference number: 6 (lower is better)
Translates to: SFCPIRSSYSAC*CCNSAASPVVC
Trigger: ACAGACCACTGGGCTGGCAGCTGAGTTGCAGCAGCAGCAGGCTGAGTACGAGGACCTTATGGGACAGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000474512.1
ENST00000593475.5
ENST00000611757.4
ENST00000619149.4
ENST00000622599.4
CDS GCA 72 bp TCATCTTTCTGTCCCATAAGGTCCTCGTACTCAGCCTaGTGCTGCTGCAACTCAGCTGCCAGCCCAGTGGTC +
Preference number: 6 (lower is better)
Translates to: SSFCPIRSSYSA*CCCNSAASPVV
Trigger: GACCACTGGGCTGGCAGCTGAGTTGCAGCAGCAGCAGGCTGAGTACGAGGACCTTATGGGACAGAAAGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000474512.1
ENST00000593475.5
ENST00000611757.4
ENST00000619149.4
ENST00000622599.4
CDS CCA 72 bp TCTCTTGCAGCGTTTCCATTGCTAGCTCATCCAGCATaGCCTTCCGCTTCTCCGCACTCTTCCGAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: SLAAFPLLAHPA*PSASPHSSEPP
Trigger: AGGAGGCTCGGAAGAGTGCGGAGAAGCGGAAGGCCATGCTGGATGAGCTAGCAATGGAAACGCTGCAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS CCA 72 bp AAGCACTGCTCACTTCCAGGTGCTTCACCTGCAAGATaGCCCAGCCCACCTGAGACCCCTCTACTGTACATG +
Preference number: 6 (lower is better)
Translates to: KHCSLPGASPAR*PSPPETPLLYM
Trigger: CATGTACAGTAGAGGGGTCTCAGGTGGGCTGGGCCATCTTGCAGGTGAAGCACCTGGAAGTGAGCAGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619149.4
CDS TCA 72 bp GCCCCATGGATCTCAGATGTAGTCAGCACCCAAGGATaGCAGTTTCACCCAGCCTCCCAATCCCAACCACCA +
Preference number: 6 (lower is better)
Translates to: APWISDVVSTQG*QFHPASQSQPP
Trigger: TGGTGGTTGGGATTGGGAGGCTGGGTGAAACTGTCATCCTTGGGTGCTGACTACATCTGAGATCCATGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474512.1
CDS GCA 72 bp CTCTTGCTGTTAGTGAGGATGTCCTGCAGTCGCTCCTaGAGCTTATCTGCCCGTTTCCGCTCCAAATGCAGC +
Preference number: 6 (lower is better)
Translates to: LLLLVRMSCSRS*SLSARFRSKCS
Trigger: GCTGCATTTGGAGCGGAAACGGGCAGATAAGCTGCAGGAGCGACTGCAGGACATCCTCACTAACAGCAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS GCA 72 bp CCGGAGTTCCAGGAGCTGAGCTGTTCTCTGGTAGTCTaGTCAAGGTCAGAGGGCTTGGCCTTCACAGAATCT +
Preference number: 6 (lower is better)
Translates to: PEFQELSCSLVV*SRSEGLAFTES
Trigger: AGATTCTGTGAAGGCCAAGCCCTCTGACCTTGAGCAGACTACCAGAGAACAGCTCAGCTCCTGGAACTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617369.4
CDS CAA 72 bp CAGCCCAGTGGTCTGTTCCCGGAGCATATTCAGTTCTaGGGTCTTTGCTGTTTGGATCTGCTCCAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: QPSGLFPEHIQF*GLCCLDLLQGS
Trigger: GCTGCCCTGGAGCAGATCCAAACAGCAAAGACCCAAGAACTGAATATGCTCCGGGAACAGACCACTGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000474512.1
ENST00000611757.4
ENST00000619149.4
ENST00000622599.4
CDS CAA 72 bp CTTCCTTGTGCTGGGACTTCTCTTGCAGCGTTTCCATaGCTAGCTCATCCAGCATGGCCTTCCGCTTCTCCG +
Preference number: 6 (lower is better)
Translates to: LPCAGTSLAAFP*LAHPAWPSASP
Trigger: CGGAGAAGCGGAAGGCCATGCTGGATGAGCTAGCAATGGAAACGCTGCAAGAGAAGTCCCAGCACAAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS CAA 72 bp AGGAGATGCTACTGCTGTCCCCTGTCTGGGTCCGGCTaGGTGAGTTCATCTCTGAGAGAACCAGCTCCTCAA +
Preference number: 6 (lower is better)
Translates to: RRCYCCPLSGSG*VSSSLREPAPQ
Trigger: TTGAGGAGCTGGTTCTCTCAGAGATGAACTCACCAAGCCGGACCCAGACAGGGGACAGCAGTAGCATCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000488361.1
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS CAA 72 bp AGTGCTTTCCTGTTCTCCCCTCCACAGGCCATGGTCTaGTCAGTAGCTTCGCTGAGTTCCGAGAGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: SAFLFSPPQAMV*SVASLSSERRG
Trigger: TCCTCTCCTCTCGGAACTCAGCGAAGCTACTGACAAGACCATGGCCTGTGGAGGGGAGAACAGGAAAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619149.4
CDS TCA 72 bp AGCATCCATTTCTCCTGCTGTGTCTCTGCCAGCCGCTaGAAGAGCTCAGCCACTTCCTCATCTGACAGCTCT +
Preference number: 6 (lower is better)
Translates to: SIHFSCCVSASR*KSSATSSSDSS
Trigger: AGAGCTGTCAGATGAGGAAGTGGCTGAGCTCTTTCAGCGGCTGGCAGAGACACAGCAGGAGAAATGGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000619149.4
ENST00000622599.4
CDS TCA 72 bp CCCGGCTTCTTTCCCATAGCGTTCCTGCAGGGCTGGTaGGTAGAACAGGGATATATGATGGATGAGGTGGTC +
Preference number: 6 (lower is better)
Translates to: PGFFPIAFLQGW*VEQGYMMDEVV
Trigger: GACCACCTCATCCATCATATATCCCTGTTCTACTCACCAGCCCTGCAGGAACGCTATGGGAAAGAAGCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473581.5
CDS GCA 72 bp GTGCTGTTCTGCAAACGGAAGTCCTCCTCCTGGCTGTaGAGCTTTGCCTGCAGCATCTCATTTTCACTCAGC +
Preference number: 6 (lower is better)
Translates to: VLFCKRKSSSWL*SFACSISFSLS
Trigger: GCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGAACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000611705.4
ENST00000611757.4
ENST00000617369.4
ENST00000622231.1
CDS GCA 72 bp CAGAGCTTGCTGAACTCGGCCATTAGTGTGCTGTTCTaGAAACGGAAGTCCTCCTCCTGGCTGTGCAGCTTT +
Preference number: 6 (lower is better)
Translates to: QSLLNSAISVLF*KRKSSSWLCSF
Trigger: AAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGAACAGCACACTAATGGCCGAGTTCAGCAAGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000617369.4
CDS GCA 72 bp CGTTCCTTGCTGAACTCGGCCATTAGTGTGCTGTTCTaGAAACGGAAGTCCTCCTCCTGGCTGTGCAGCTTT +
Preference number: 6 (lower is better)
Translates to: RSLLNSAISVLF*KRKSSSWLCSF
Trigger: AAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGAACAGCACACTAATGGCCGAGTTCAGCAAGGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611757.4
ENST00000622231.1
CDS GCA 72 bp AGTGGGTGGGCCCGTCTGGCCAGATGGTATTTTGGCTaGATAGCCTTTACACACACACACACACACGTGTTG +
Preference number: 6 (lower is better)
Translates to: SGWARLARWYFG*IAFTHTHTHVL
Trigger: CAACACGTGTGTGTGTGTGTGTGTAAAGGCTATGCAGCCAAAATACCATCTGGCCAGACGGGCCCACCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619149.4
CDS CCA 72 bp CCTCGGCTTCCTTCAAGCGCCGTTCAAACCAGCCCTTaGCTCCATCCATGGAATGTACCTGAGCTTGAAGTT +
Preference number: 6 (lower is better)
Translates to: PRLPSSAVQTSP*LHPWNVPELEV
Trigger: AACTTCAAGCTCAGGTACATTCCATGGATGGAGCCAAGGGCTGGTTTGAACGGCGCTTGAAGGAAGCCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000593475.5
ENST00000611757.4
ENST00000619107.1
ENST00000619149.4
ENST00000622599.4
CDS CCA 72 bp GGCCCCACGCACTCCTTGCTGAGCCGCACAATTTCCTaGGACAGAACTTCCATATCCTTGTGCAAGTGCATA +
Preference number: 6 (lower is better)
Translates to: GPTHSLLSRTIS*DRTSISLCKCI
Trigger: TATGCACTTGCACAAGGATATGGAAGTTCTGTCCCAGGAAATTGTGCGGCTCAGCAAGGAGTGCGTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000619149.4
ENST00000622599.4
CDS GCA 72 bp CTGCAAACGGAAGTCCTCCTCCTGGCTGTGCAGCTTTaGCTGCAGCATCTCATTTTCACTCAGCAATACCTC +
Preference number: 6 (lower is better)
Translates to: LQTEVLLLAVQL*LQHLIFTQQYL
Trigger: GAGGTATTGCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000611705.4
ENST00000611757.4
ENST00000617369.4
ENST00000622231.1
CDS GCA 72 bp CCTCAGGTGGCAGAGTCCCTGTGCCAAATGACCACATaGCTAAAAGACGAAGGTTCAGCTCTATCCATGCCT +
Preference number: 6 (lower is better)
Translates to: PQVAESLCQMTT*LKDEGSALSMP
Trigger: AGGCATGGATAGAGCTGAACCTTCGTCTTTTAGGCATGTGGTCATTTGGCACAGGGACTCTGCCACCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473581.5
CDS GCA 72 bp AACTGGCCTTCAACCCCTCAGGTGGCAGAGTCCCTGTaGCAAATGACCACATGCCTAAAAGACGAAGGTTCA +
Preference number: 6 (lower is better)
Translates to: NWPSTPQVAESL*QMTTCLKDEGS
Trigger: TGAACCTTCGTCTTTTAGGCATGTGGTCATTTGGCACAGGGACTCTGCCACCTGAGGGGTTGAAGGCCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473581.5
CDS CCA 72 bp AGACCAGGGGAGCCCATTTTACACCTCAGCCTCTCCTaGGGTGCATATAACCGTACAGACTCTCTGTTTGAC +
Preference number: 6 (lower is better)
Translates to: RPGEPILHLSLS*GAYNRTDSLFD
Trigger: GTCAAACAGAGAGTCTGTACGGTTATATGCACCCCAGGAGAGGCTGAGGTGTAAAATGGGCTCCCCTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474512.1
CDS CAA 90 bp GTGTGCTGTTCTGCAAACGGAAGTCCTCCTCCTGGCTGTGCAGCTTaGCCTGCAGCATCTCATTTTCACTCAGCAATACCTCGACTTCCT +
Preference number: 6 (lower is better)
Translates to: VCCSANGSPPPGCAA*PAASHFHSAIPRLP
Trigger: AGGAAGTCGAGGTATTGCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGAACAGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000611705.4
ENST00000611757.4
ENST00000617369.4
ENST00000622231.1
CDS CAA 90 bp TCAGCTCCCATCCATAAGAAGTCTCATGCTCACCCAGATTCTAGCTaGGGAGCTCCAGGATTCTCAGACACAGTCAGCCCCATGGATCTC +
Preference number: 6 (lower is better)
Translates to: SAPIHKKSHAHPDSS*GAPGFSDTVSPMDL
Trigger: GAGATCCATGGGGCTGACTGTGTCTGAGAATCCTGGAGCTCCCAAGCTAGAATCTGGGTGAGCATGAGACTTCTTATGGATGGGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474512.1
CDS CAA 90 bp TGCATATTCTTGGTGAGCTGCTCCTCCAGCATGTTCTGCAGCTTCTaGTTCATCTCCCGAAGGTTCTCGTCACCTGGCTTCACTAGGTCT +
Preference number: 6 (lower is better)
Translates to: CIFLVSCSSSMFCSF*FISRRFSSPGFTRS
Trigger: AGACCTAGTGAAGCCAGGTGACGAGAACCTTCGGGAGATGAACAAGAAGCTGCAGAACATGCTGGAGGAGCAGCTCACCAAGAATATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000619149.4
ENST00000622599.4
CDS GCA 72 bp AAACGGAAGTCCTCCTCCTGGCTGTGCAGCTTTGCCTaGAGCATCTCATTTTCACTCAGCAATACCTCGACT +
Preference number: 6 (lower is better)
Translates to: KRKSSSWLCSFA*SISFSLSNTST
Trigger: AGTCGAGGTATTGCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000611705.4
ENST00000611757.4
ENST00000617369.4
ENST00000622231.1
CDS CAA 72 bp CATTCTTGCGTAGTTCATCTGAAAGCTGGTAGTTGTTaGTCCGGAGTTCCAGGAGCTGAGCCTGCATCCGCT +
Preference number: 6 (lower is better)
Translates to: HSCVVHLKAGSC*SGVPGAEPASA
Trigger: AGCGGATGCAGGCTCAGCTCCTGGAACTCCGGACAAACAACTACCAGCTTTCAGATGAACTACGCAAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000611757.4
ENST00000622599.4
CDS CAA 72 bp TCTGCAAACGGAAGTCCTCCTCCTGGCTGTGCAGCTTaGCCTGCAGCATCTCATTTTCACTCAGCAATACCT +
Preference number: 6 (lower is better)
Translates to: SANGSPPPGCAA*PAASHFHSAIP
Trigger: AGGTATTGCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376423.8
ENST00000593475.5
ENST00000611705.4
ENST00000611757.4
ENST00000617369.4
ENST00000622231.1
CDS CAA 72 bp ATCCATAAGAAGTCTCATGCTCACCCAGATTCTAGCTaGGGAGCTCCAGGATTCTCAGACACAGTCAGCCCC +
Preference number: 6 (lower is better)
Translates to: IHKKSHAHPDSS*GAPGFSDTVSP
Trigger: GGGGCTGACTGTGTCTGAGAATCCTGGAGCTCCCAAGCTAGAATCTGGGTGAGCATGAGACTTCTTATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474512.1
CDS TCA 72 bp TCCTGGGTCAACTGCTCCTTCTCCTGCCCTATTTCTTaGAGTTGTTCCAGCAGTCGACTATTGGCCCGTAAT +
Preference number: 6 (lower is better)
Translates to: SWVNCSFSCPIS*SCSSSRLLARN
Trigger: ATTACGGGCCAATAGTCGACTGCTGGAACAACTTCAAGAAATAGGGCAGGAGAAGGAGCAGTTGACCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000473581.5
ENST00000474512.1
ENST00000593475.5
ENST00000611757.4
ENST00000619149.4
ENST00000622599.4
CDS TCA 72 bp AGAGAGAATGACTGGCCTGTCCTGCATGTCGCAATCTaGATCCAAGTTGGTGGGCTTGGGGAAAAGTTGACA +
Preference number: 6 (lower is better)
Translates to: RENDWPVLHVAI*IQVGGLGEKLT
Trigger: TGTCAACTTTTCCCCAAGCCCACCAACTTGGATTCAGATTGCGACATGCAGGACAGGCCAGTCATTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473581.5
ENST00000488361.1
ENST00000611757.4
CDS TCA 72 bp TTAGGTCTGGTTCACTGTAGGTGCTCACTGGAGGGATaGATGAGTCAGATAGGTAGAAGCAAGGGTGGATGG +
Preference number: 6 (lower is better)
Translates to: LGLVHCRCSLEG*MSQIGRSKGGW
Trigger: CCATCCACCCTTGCTTCTACCTATCTGACTCATTCATCCCTCCAGTGAGCACCTACAGTGAACCAGACCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495258.1
CDS CAA 72 bp TGGTCTGTTCCCGGAGCATATTCAGTTCTTGGGTCTTaGCTGTTTGGATCTGATCTTGTAGGGCCCGCAAAG +
Preference number: 6 (lower is better)
Translates to: WSVPGAYSVLGS*LFGSDLVGPAK
Trigger: CTTTGCGGGCCCTACAAGATCAGATCCAAACAGCAAAGACCCAAGAACTGAATATGCTCCGGGAACAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593475.5
CDS CAA 90 bp GTTCAACACCATTCTTGCGTAGTTCATCTGAAAGCTGGTAGTTGTTaGTCCGGAGTTCCAGGAGCTGAGCCTGTAATCCCAGCTACTAGG +
Preference number: 6 (lower is better)
Translates to: VQHHSCVVHLKAGSC*SGVPGAEPVIPATR
Trigger: CCTAGTAGCTGGGATTACAGGCTCAGCTCCTGGAACTCCGGACAAACAACTACCAGCTTTCAGATGAACTACGCAAGAATGGTGTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611705.4
CDS CAA 90 bp GTTCAACACCATTCTTGCGTAGTTCATCTGAAAGCTGGTAGTTGTTaGTCCGGAGTTCCAGGAGCTGAGCTGTTCTCTGGTAGTCTGCTC +
Preference number: 6 (lower is better)
Translates to: VQHHSCVVHLKAGSC*SGVPGAELFSGSLL
Trigger: GAGCAGACTACCAGAGAACAGCTCAGCTCCTGGAACTCCGGACAAACAACTACCAGCTTTCAGATGAACTACGCAAGAATGGTGTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617369.4
CDS TCA 72 bp CTTTCTTGCTCTTGCTCAGTGCCTTCTGAGCTTTGCTaGACTCCTTATCCAAGTAGGCGACCTTCTGTCGAA +
Preference number: 6 (lower is better)
Translates to: LSCSCSVPSELC*TPYPSRRPSVE
Trigger: TTCGACAGAAGGTCGCCTACTTGGATAAGGAGTTCAGCAAAGCTCAGAAGGCACTGAGCAAGAGCAAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376423.8
ENST00000480041.1
ENST00000593475.5
ENST00000611705.4
ENST00000611757.4
ENST00000617369.4
ENST00000622231.1
CDS CCA 72 bp CCTGCATGTCGCAATCTGAATCCAAGTTGGTGGGCTTaGGGAAAAGTTGACAAGAAAATATGTGTGCTGCGC +
Preference number: 6 (lower is better)
Translates to: PACRNLNPSWWA*GKVDKKICVLR
Trigger: GCGCAGCACACATATTTTCTTGTCAACTTTTCCCCAAGCCCACCAACTTGGATTCAGATTGCGACATGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473581.5
ENST00000488361.1
ENST00000611757.4
CDS CAA 72 bp CATTCTTGCGTAGTTCATCTGAAAGCTGGTAGTTGTTaGTCCGGAGTTCCAGGAGCTGAGCCTGTAATCCCA +
Preference number: 6 (lower is better)
Translates to: HSCVVHLKAGSC*SGVPGAEPVIP
Trigger: TGGGATTACAGGCTCAGCTCCTGGAACTCCGGACAAACAACTACCAGCTTTCAGATGAACTACGCAAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611705.4
CDS CAA 72 bp CATTCTTGCGTAGTTCATCTGAAAGCTGGTAGTTGTTaGTCCGGAGTTCCAGGAGCTGAGCTGTTCTCTGGT +
Preference number: 6 (lower is better)
Translates to: HSCVVHLKAGSC*SGVPGAELFSG
Trigger: ACCAGAGAACAGCTCAGCTCCTGGAACTCCGGACAAACAACTACCAGCTTTCAGATGAACTACGCAAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617369.4
CDS TCA 72 bp CAGGGAAACAAGGACAGATACAGCAACACATGGCAGTaGGGTAGTAGCAGATGTAAAGGCACACAAAGAAAG +
Preference number: 6 (lower is better)
Translates to: QGNKDRYSNTWQ*GSSRCKGTQRK
Trigger: CTTTCTTTGTGTGCCTTTACATCTGCTACTACCTCACTGCCATGTGTTGCTGTATCTGTCCTTGTTTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480041.1
CDS GCA 72 bp TTACAAGTTGGAAAAAGGGACCTTCTCCTTGGATGGTaGACCTACTATGAGCCACATAATTTATGGCACCAG +
Preference number: 6 (lower is better)
Translates to: LQVGKRDLLLGW*TYYEPHNLWHQ
Trigger: CTGGTGCCATAAATTATGTGGCTCATAGTAGGTGCACCATCCAAGGAGAAGGTCCCTTTTTCCAACTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473581.5
ENST00000488361.1
ENST00000611757.4
CDS CCA 72 bp TCATTACAAGTTGGAAAAAGGGACCTTCTCCTTGGATaGTGCACCTACTATGAGCCACATAATTTATGGCAC +
Preference number: 6 (lower is better)
Translates to: SLQVGKRDLLLG*CTYYEPHNLWH
Trigger: GTGCCATAAATTATGTGGCTCATAGTAGGTGCACCATCCAAGGAGAAGGTCCCTTTTTCCAACTTGTAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473581.5
ENST00000488361.1
ENST00000611757.4
CDS CAA 72 bp AGTGATCATTACAAGTTGGAAAAAGGGACCTTCTCCTaGGATGGTGCACCTACTATGAGCCACATAATTTAT +
Preference number: 6 (lower is better)
Translates to: SDHYKLEKGTFS*DGAPTMSHIIY
Trigger: ATAAATTATGTGGCTCATAGTAGGTGCACCATCCAAGGAGAAGGTCCCTTTTTCCAACTTGTAATGATCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473581.5
ENST00000488361.1
ENST00000611757.4