RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRIP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000144596

Ensembl transcript IDs: ENST00000413414.1, ENST00000422481.5, ENST00000430219.2, ENST00000619221.4, ENST00000621039.5, ENST00000637182.1, ENST00000637939.1

Found 1355 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCTGCCAAGGCCGGTGGCCAGGCCTGCCCTCGAGGGCCACCCTCTaGACGGTGCCCGTCATGATGGATGCCTCCAGTTCCCTCAGCAGC +
Preference number: 1 (lower is better)
Translates to: LCQGRWPGLPSRATL*TVPVMMDASSSLSS
Trigger: GCTGCTGAGGGAACTGGAGGCATCCATCATGACGGGCACCGTGCAGAGGGTGGCCCTCGAGGGCAGGCCTGGCCACCGGCCTTGGCAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR CCA 90 bp AGGCCTCCAGGAGACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTaGGTCGGCAGAGATGGTTCCGGCCCTGACCAGGAGGCCTGTGTC +
Preference number: 1 (lower is better)
Translates to: RPPGDSVGRSPRGPW*VGRDGSGPDQEACV
Trigger: GACACAGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTCTCCTGGAGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR TCA 90 bp CCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCGTaGTCGTCCAGAGGGGCTGGGGGTCCAACCCAGACAGGGTCACAC +
Preference number: 1 (lower is better)
Translates to: PALTRRPVSAQTVHP*SSRGAGGPTQTGSH
Trigger: GTGTGACCCTGTCTGGGTTGGACCCCCAGCCCCTCTGGACGATCACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR GCA 90 bp TGGGTCGGCAGAGATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTaGTCAGACTGTCCACCCGTGATCGTCCAGAGGGGCTGGGGGTCC +
Preference number: 1 (lower is better)
Translates to: WVGRDGSGPDQEACV*SDCPPVIVQRGWGS
Trigger: GGACCCCCAGCCCCTCTGGACGATCACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR TCA 90 bp GTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGGCCCTaGCCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCGTGATCGT +
Preference number: 1 (lower is better)
Translates to: VPKGALVGRQRWFRP*PGGLCLLRLSTRDR
Trigger: ACGATCACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR CCA 90 bp GCGGCTGATGATCAGCTCCAAGACATCACCCGCCTCGGCCAGGAGTaGCACCGCCAGGCAGCAGTCGAAGTCCCGTGTACGGACGTGGTT +
Preference number: 1 (lower is better)
Translates to: AADDQLQDITRLGQE*HRQAAVEVPCTDVV
Trigger: AACCACGTCCGTACACGGGACTTCGACTGCTGCCTGGCGGTGCCACTCCTGGCCGAGGCGGGTGATGTCTTGGAGCTGATCATCAGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR CCA 90 bp GACCTGCAGGACCCTGTCGAAGGGCTGGAGGCCTCCACGGTGGGCTaGCCCATCAGGGCGCACAGTGTGGACATAGACACCTTTTTCCAG +
Preference number: 1 (lower is better)
Translates to: DLQDPVEGLEASTVG*PIRAHSVDIDTFFQ
Trigger: CTGGAAAAAGGTGTCTATGTCCACACTGTGCGCCCTGATGGGCCAGCCCACCGTGGAGGCCTCCAGCCCTTCGACAGGGTCCTGCAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR TCA 90 bp TTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCTaGTTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCGAGGA +
Preference number: 1 (lower is better)
Translates to: LHMRRPAWLGGPPRA*LHTFGRMAEASARG
Trigger: TCCTCGGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR GCA 90 bp CTGACTGACCACATGACTCCAGGTCTTCGAGAGCTTCTCCAAACATaGGCCAGAAGCCCTCCTCTCGGGCAGGGCCAGGGGCTGGGCTGT +
Preference number: 1 (lower is better)
Translates to: LTDHMTPGLRELLQT*ARSPPLGQGQGLGC
Trigger: ACAGCCCAGCCCCTGGCCCTGCCCGAGAGGAGGGCTTCTGGCGCATGTTTGGAGAAGCTCTCGAAGACCTGGAGTCATGTGGTCAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR CCA 90 bp CTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCTGCCTGGGTaGCCCCTTAGGAGTTCGGCCCACATGCTGACTTCAGAGCATCCG +
Preference number: 1 (lower is better)
Translates to: LLQPSYVSGSQDLPG*PLRSSAHMLTSEHP
Trigger: CGGATGCTCTGAAGTCAGCATGTGGGCCGAACTCCTAAGGGGCCACCCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR TCA 90 bp GCTCCCATCCGAAGCAGCATCCTTCCTGGTGGCCGAGTCTCTAGATaGAGTGGCTCCCCATCAGGAAGCCAACCCCCAAGCGCGTGTGCA +
Preference number: 1 (lower is better)
Translates to: APIRSSILPGGRVSR*SGSPSGSQPPSACA
Trigger: TGCACACGCGCTTGGGGGTTGGCTTCCTGATGGGGAGCCACTTCATCTAGAGACTCGGCCACCAGGAAGGATGCTGCTTCGGATGGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR TCA 90 bp CCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATaGGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCC +
Preference number: 1 (lower is better)
Translates to: PSIIPGSESARPTDE*VGGRFSSPATCLGA
Trigger: GGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR GCA 90 bp GCGTGTGCACGCATCATGGGAATGCCTCATACCCCAATGCATGACTaGGCTGGGGTATCCAGCTCCTGCCTGCTCACCTCCTGTGACCGA +
Preference number: 1 (lower is better)
Translates to: ACARIMGMPHTPMHD*AGVSSSCLLTSCDR
Trigger: TCGGTCACAGGAGGTGAGCAGGCAGGAGCTGGATACCCCAGCGCAGTCATGCATTGGGGTATGAGGCATTCCCATGATGCGTGCACACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR GCA 90 bp ACTCCCAAGACAGAGTACTCGCTTCCTGGAAAGAAGCTCTTCCTCTaGTCACAGAACTGTGGCCTCCCCAGTGGGGCCTGGCCCTGGCCT +
Preference number: 1 (lower is better)
Translates to: TPKTEYSLPGKKLFL*SQNCGLPSGAWPWP
Trigger: AGGCCAGGGCCAGGCCCCACTGGGGAGGCCACAGTTCTGTGAGCAGAGGAAGAGCTTCTTTCCAGGAAGCGAGTACTCTGTCTTGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CCA 90 bp GCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGAGTaGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGA +
Preference number: 1 (lower is better)
Translates to: ASSQAQSLPDQQMNE*VAASPAQLRVWEPG
Trigger: TCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR CCA 90 bp ACCCTTCTTAAGGGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTaGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCC +
Preference number: 1 (lower is better)
Translates to: TLLKGGSSGHLGDPT*RETPAVTPTRAGPP
Trigger: GGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCTTAAGAAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR TCA 90 bp GAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATaGATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGG +
Preference number: 1 (lower is better)
Translates to: ETKHHPRLRVCQTNR*MSGWPLLQPSYVSG
Trigger: CCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR GCA 90 bp CCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTaGTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACC +
Preference number: 1 (lower is better)
Translates to: PPCSSFQLHGFAGRK*SLHLRPLQGGPTET
Trigger: GGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR GCA 90 bp ATGCCTCATACCCCAATGCATGACTGCGCTGGGGTATCCAGCTCCTaGCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGC +
Preference number: 1 (lower is better)
Translates to: MPHTPMHDCAGVSSS*LLTSCDRELTPPCS
Trigger: GCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGGATACCCCAGCGCAGTCATGCATTGGGGTATGAGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR TCA 90 bp CCCATTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTaGTCTGGCTGTAAAGAGGAGCGCTACCGCCTCACAGGTCCTGCG +
Preference number: 1 (lower is better)
Translates to: PISLPSPSLFLLFLH*SGCKEERYRLTGPA
Trigger: CGCAGGACCTGTGAGGCGGTAGCGCTCCTCTTTACAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR GCA 90 bp CTCATACCCCAATGCATGACTGCGCTGGGGTATCCAGCTCCTGCCTaGTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCAT +
Preference number: 1 (lower is better)
Translates to: LIPQCMTALGYPAPA*SPPVTENSLLLAAH
Trigger: ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGGATACCCCAGCGCAGTCATGCATTGGGGTATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR CCA 90 bp ACTAGCTGTGCCCGCTGCCTGAGACACTCTTCCTCCAGGTCTCCATaGAGGCTGGCTCCTGTCTTCAGGTCTCATTGCAAATGTCGCCTC +
Preference number: 1 (lower is better)
Translates to: TSCARCLRHSSSRSP*RLAPVFRSHCKCRL
Trigger: GAGGCGACATTTGCAATGAGACCTGAAGACAGGAGCCAGCCTCCATGGAGACCTGGAGGAAGAGTGTCTCAGGCAGCGGGCACAGCTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CCA 90 bp CACCGTCAGGTGCAGGCGCTCATTAATACCCAGTTAGGGGCTCTCTaGGGTCACAACAGGTCCATGTTTGGGGCAGCCTTCCTGCCAACA +
Preference number: 1 (lower is better)
Translates to: HRQVQALINTQLGAL*GHNRSMFGAAFLPT
Trigger: TGTTGGCAGGAAGGCTGCCCCAAACATGGACCTGTTGTGACCCCAGAGAGCCCCTAACTGGGTATTAATGAGCGCCTGCACCTGACGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR TCA 90 bp GTGCCCGTCATGATGGATGCCTCCAGTTCCCTCAGCAGCTCTGACTaGCCACATGACTCCAGGTCTTCGAGAGCTTCTCCAAACATGCGC +
Preference number: 1 (lower is better)
Translates to: VPVMMDASSSLSSSD*PHDSRSSRASPNMR
Trigger: GCGCATGTTTGGAGAAGCTCTCGAAGACCTGGAGTCATGTGGTCAGTCAGAGCTGCTGAGGGAACTGGAGGCATCCATCATGACGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR GCA 90 bp CCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTaGTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGG +
Preference number: 1 (lower is better)
Translates to: PRTHSSLQLIPAPWL*WEEVLPTSSTSPRR
Trigger: CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR GCA 90 bp ATCAAGGCCACCAGGATGATTGGAGGTGATGCTCTTGGCCTTAGGTaGTCACCTGCTGCGGCTTTCAGTCCCTCCTCTTTAGCCTTGGGC +
Preference number: 1 (lower is better)
Translates to: IKATRMIGGDALGLR*SPAAAFSPSSLALG
Trigger: GCCCAAGGCTAAAGAGGAGGGACTGAAAGCCGCAGCAGGTGAGCACCTAAGGCCAAGAGCATCACCTCCAATCATCCTGGTGGCCTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CCA 90 bp AGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTaGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCC +
Preference number: 1 (lower is better)
Translates to: RTHSSLQLIPAPWLC*EEVLPTSSTSPRRP
Trigger: GGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR CCA 90 bp GGGGTATTAGTTAGAGTCGGGTGCATCTTCCCTCGCCTGGAGTCCTaGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTGAGAGTGTG +
Preference number: 1 (lower is better)
Translates to: GVLVRVGCIFPRLES*SQCSFPKPRGPESV
Trigger: CACACTCTCAGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACTCCAGGCGAGGGAAGATGCACCCGACTCTAACTAATACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR TCA 90 bp CTCACCCTCAAAAGTGAGGGCTCTTGGCTTTCACTTGGTGCCCTGTaGCAGGTAGACAGTGCCCTTTCACTCTGGGCTGAGTACACGGGA +
Preference number: 1 (lower is better)
Translates to: LTLKSEGSWLSLGAL*QVDSALSLWAEYTG
Trigger: TCCCGTGTACTCAGCCCAGAGTGAAAGGGCACTGTCTACCTGTCACAGGGCACCAAGTGAAAGCCAAGAGCCCTCACTTTTGAGGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR TCA 90 bp ATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGTaGGGGCTCTTGGCTTTCACTTGGTGCCCTGTGACAGGTAGACAG +
Preference number: 1 (lower is better)
Translates to: IQKPHLCCAVPHPQK*GLLAFTWCPVTGRQ
Trigger: CTGTCTACCTGTCACAGGGCACCAAGTGAAAGCCAAGAGCCCTCACTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR CCA 90 bp GGGAATCTCAGAATCTCAGGACTAGCAAGCCCCAAACCCCTATTCTaGAGAAGCGAAGGAGCTGGGCTCCCATCCGAAGCAGCATCCTTC +
Preference number: 1 (lower is better)
Translates to: GNLRISGLASPKPLF*RSEGAGLPSEAASF
Trigger: GAAGGATGCTGCTTCGGATGGGAGCCCAGCTCCTTCGCTTCTCCAGAATAGGGGTTTGGGGCTTGCTAGTCCTGAGATTCTGAGATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR CCA 90 bp CCTCTTGACTCCTCATCTGTTCCCTCAAATGGAAGAGCACTTTTCTaGCCTCCAGGGACCCCAGGTTGGAGACAGATGGAGGTGGGAGTG +
Preference number: 1 (lower is better)
Translates to: PLDSSSVPSNGRALF*PPGTPGWRQMEVGV
Trigger: CACTCCCACCTCCATCTGTCTCCAACCTGGGGTCCCTGGAGGCCAGAAAAGTGCTCTTCCATTTGAGGGAACAGATGAGGAGTCAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR CCA 90 bp GCCTATGCCTACCTGCCTGCCTCTCTCTATGTGTACTGGGCCATGTaGCTTGTGTTCAAGCCCTGGTTCCATCCCTTACTACCTGTGTGG +
Preference number: 1 (lower is better)
Translates to: AYAYLPASLYVYWAM*LVFKPWFHPLLPVW
Trigger: CCACACAGGTAGTAAGGGATGGAACCAGGGCTTGAACACAAGCCACATGGCCCAGTACACATAGAGAGAGGCAGGCAGGTAGGCATAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR TCA 90 bp CAGTGTGGACATAGACACCTTTTTCCAGGAGGCCATCTGAGACGCTaGAACCAAAGTCATGCCGCATGGGGTCCTTGTGCAGGGTCACCT +
Preference number: 1 (lower is better)
Translates to: QCGHRHLFPGGHLRR*NQSHAAWGPCAGSP
Trigger: AGGTGACCCTGCACAAGGACCCCATGCGGCATGACTTTGGTTTCAGCGTCTCAGATGGCCTCCTGGAAAAAGGTGTCTATGTCCACACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR TCA 90 bp TTCCCCATCTGGAATAAACCATTGTCCCCATCAAGGCCACCAGGATaGTTGGAGGTGATGCTCTTGGCCTTAGGTGCTCACCTGCTGCGG +
Preference number: 1 (lower is better)
Translates to: FPIWNKPLSPSRPPG*LEVMLLALGAHLLR
Trigger: CCGCAGCAGGTGAGCACCTAAGGCCAAGAGCATCACCTCCAATCATCCTGGTGGCCTTGATGGGGACAATGGTTTATTCCAGATGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR GCA 90 bp TCACACAGCTATGGCTGCTTGCATCCAGAAGCCACACCTCTGCTGTaGTGTCCCTCACCCTCAAAAGTGAGGGCTCTTGGCTTTCACTTG +
Preference number: 1 (lower is better)
Translates to: SHSYGCLHPEATPLL*CPSPSKVRALGFHL
Trigger: CAAGTGAAAGCCAAGAGCCCTCACTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAGCCATAGCTGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR GCA 90 bp TTCTCTTCCTTGAGACCGTCAAACTCGTTCCTATCTCAGGGCCTTTaGACTAGCTGTGCCCGCTGCCTGAGACACTCTTCCTCCAGGTCT +
Preference number: 1 (lower is better)
Translates to: FSSLRPSNSFLSQGL*TSCARCLRHSSSRS
Trigger: AGACCTGGAGGAAGAGTGTCTCAGGCAGCGGGCACAGCTAGTGCAAAGGCCCTGAGATAGGAACGAGTTTGACGGTCTCAAGGAAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR GCA 90 bp AGAAGACCACCCTACCCCCATTTTCTGGCTCTTTCTGACAGCCTATaGCTACCTGCCTGCCTCTCTCTATGTGTACTGGGCCATGTGGCT +
Preference number: 1 (lower is better)
Translates to: RRPPYPHFLALSDSL*LPACLSLCVLGHVA
Trigger: AGCCACATGGCCCAGTACACATAGAGAGAGGCAGGCAGGTAGGCATAGGCTGTCAGAAAGAGCCAGAAAATGGGGGTAGGGTGGTCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CCA 90 bp ACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTTTTTCTCTaGCCCATTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTC +
Preference number: 1 (lower is better)
Translates to: TLDTLHWARVSHLFL*PISLPSPSLFLLFL
Trigger: GAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAATGGGCCAGAGAAAAAGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR CCA 90 bp TTTCTGACAGCCTATGCCTACCTGCCTGCCTCTCTCTATGTGTACTaGGCCATGTGGCTTGTGTTCAAGCCCTGGTTCCATCCCTTACTA +
Preference number: 1 (lower is better)
Translates to: FLTAYAYLPASLYVY*AMWLVFKPWFHPLL
Trigger: TAGTAAGGGATGGAACCAGGGCTTGAACACAAGCCACATGGCCCAGTACACATAGAGAGAGGCAGGCAGGTAGGCATAGGCTGTCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CCA 90 bp GCCTCTCTCTATGTGTACTGGGCCATGTGGCTTGTGTTCAAGCCCTaGTTCCATCCCTTACTACCTGTGTGGACTTGGGCAAATTACGTA +
Preference number: 1 (lower is better)
Translates to: ASLYVYWAMWLVFKP*FHPLLPVWTWANYV
Trigger: TACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAGGGCTTGAACACAAGCCACATGGCCCAGTACACATAGAGAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CCA 90 bp ATGTGGCTTGTGTTCAAGCCCTGGTTCCATCCCTTACTACCTGTGTaGACTTGGGCAAATTACGTAACCTCTCTGTGCCTGTTTCCTCAT +
Preference number: 1 (lower is better)
Translates to: MWLVFKPWFHPLLPV*TWANYVTSLCLFPH
Trigger: ATGAGGAAACAGGCACAGAGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAGGGCTTGAACACAAGCCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR TCA 90 bp AAGGGATGCTGGTGCTTCCAGATTTCAAGTGGGAATAGACTTCTTTaGATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCAT +
Preference number: 1 (lower is better)
Translates to: KGCWCFQISSGNRLL*ISTLDTLHWARVSH
Trigger: ATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAAAGAAGTCTATTCCCACTTGAAATCTGGAAGCACCAGCATCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp CGGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCGAGGGGCCATAGGGTaGGTGGGCGGGCAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: RHGWEAHRGPDCILLGEWRGAIG*VGGQAG
Trigger: GCCTGCCTGCCCGCCCACCCACCCTATGGCCCCTCG...CCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR-3UTR GCA 90 bp AGAGATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCGGCCCGGCTGCTGTGTaGCGTGTGCGGCTTGCGGCT +
Preference number: 2 (lower is better)
Translates to: RDGSGPDQEACVCSDCPPGPAAV*RVRLAA
Trigger: AGCCGCAAGCCGCACACGGCACACAGCAGCCGGGCC...GGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR-3UTR GCA 90 bp GAGGGGCTTGGGCTGAGCGGACGTGCAGATGGGTCAGTGGCCACACGGCCTACAAGGGCAGGACCTCCCTaGCTGGCACCCCAGTCACCA +
Preference number: 2 (lower is better)
Translates to: EGLGLSGRADGSVATRPTRAGPP*LAPQSP
Trigger: TGGTGACTGGGGTGCCAGGCAGGGAGGTCCTGCCCT...TGTAGGCCGTGTGGCCACTGACCCATCTGCACGTCCGCTCAGCCCAAGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp AGACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCTGGGAGCCAGGATCTaGCTGGGTGGCCCCTTAGGA +
Preference number: 2 (lower is better)
Translates to: RQRGQVPKGALVGRQRWFLGARI*LGGPLG
Trigger: TCCTAAGGGGCCACCCAGGCAGATCCTGGCTCCCAG...GAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp AGACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCAGGGCCAGCACTTCCTaGGATCCCAGACGCCCCAAC +
Preference number: 2 (lower is better)
Translates to: RQRGQVPKGALVGRQRWFRASTS*DPRRPN
Trigger: GTTGGGGCGTCTGGGATCCCAGGAAGTGCTGGCCCT...GAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp GGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCCCAGGGCCCAGCGTTaGGCTCGAGGGGCCATAGGG +
Preference number: 2 (lower is better)
Translates to: GILETQLGERPQLSLQLGPRAQR*ARGAIG
Trigger: CCCTATGGCCCCTCGAGCCCAACGCTGGGCCCTGGG...CCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR-3UTR CCA 90 bp CGAAGGGCTGGAGGCCTCCACGGTGGGCTGGCCCATCAGGGCGCACAGTGTGGACAAAGTCATGCCGCATaGGGTCCTTGTGCAGGGTCA +
Preference number: 2 (lower is better)
Translates to: RRAGGLHGGLAHQGAQCGQSHAA*GPCAGS
Trigger: TGACCCTGCACAAGGACCCCATGCGGCATGACTTTG...TCCACACTGTGCGCCCTGATGGGCCAGCCCACCGTGGAGGCCTCCAGCCCTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR-3UTR TCA 90 bp GACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCAGACCAACAGATGAATaGGTGGGTGGCCGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: DSVGRSPRGPWWVGRDGSRPTDE*VGGRFS
Trigger: GGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCT...GGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR TCA 90 bp GCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCCTCTCTCCTCTCGGCTaGGCAGCCTGTGCCAACCCT +
Preference number: 2 (lower is better)
Translates to: AHRGPDCILLGEWQRPQPLSPLG*AACANP
Trigger: AGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGAG...GGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp ACCCGTGATCGTCCAGAGGGGCTGGGGGTCCAACCCAGACAGGGTCACACAGCACTGCTGTGTGCCGTGTaGGGCTTGCGGCTGATGATC +
Preference number: 2 (lower is better)
Translates to: TRDRPEGLGVQPRQGHTALLCAV*GLRLMI
Trigger: GATCATCAGCCGCAAGCCGCACACGGCACACAGCAG...TGCTGTGTGACCCTGTCTGGGTTGGACCCCCAGCCCCTCTGGACGATCACGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR-3UTR GCA 90 bp AGGGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGCTGGGAGCCAGGATCTaGCTGGGTGGCCCCTTAGGA +
Preference number: 2 (lower is better)
Translates to: REAPLGILETQLGERPQLLGARI*LGGPLG
Trigger: TCCTAAGGGGCCACCCAGGCAGATCCTGGCTCCCAG...CAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR-3UTR GCA 90 bp GAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCCTGGGAGCCAGGATCTaGCTGGGTGGCCCCTTAGGA +
Preference number: 2 (lower is better)
Translates to: EEILHMRRPAWLGGPPRALGARI*LGGPLG
Trigger: TCCTAAGGGGCCACCCAGGCAGATCCTGGCTCCCAG...GGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp ACTGATCTGGCTGTAAAGAGGAGCGCTACCGCCTCACAGGTCCTGCGTCCATCGCCTCGGTGGCAGTTCTaGGGCCCCGGGGCAGTGGTT +
Preference number: 2 (lower is better)
Translates to: TDLAVKRSATASQVLRPSPRWQF*GPGAVV
Trigger: AACCACTGCCCCGGGGCCCCAGAACTGCCACCGAGG...CGATGGACGCAGGACCTGTGAGGCGGTAGCGCTCCTCTTTACAGCCAGATCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR-3UTR CCA 90 bp GGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCCCAAGGGGGCCTTGGTaGGTCGGCAGAGATGGTTCC +
Preference number: 2 (lower is better)
Translates to: GMAGRPTAGLIAYFWENGPRGPW*VGRDGS
Trigger: GGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGG...GCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp GAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCCCAAGGGGGCCTTGGTaGGTCGGCAGAGATGGTTCC +
Preference number: 2 (lower is better)
Translates to: EEILHMRRPAWLGGPPRAPRGPW*VGRDGS
Trigger: GGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGG...GGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR TCA 90 bp AGACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCAGACCAACAGATGAATaGGTGGGTGGCCGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: RQRGQVPKGALVGRQRWFRPTDE*VGGRFS
Trigger: GGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCT...GAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp GCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCGGGGTATCCAGCTCCTaGCTGCTCACCTCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: AHRGPDCILLGEWQRPQPGVSSS*LLTSCD
Trigger: GTCACAGGAGGTGAGCAGGCAGGAGCTGGATACCCC...GGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp GAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCCAGGAGGCCTGTGTCTaGTCAGACTGTCCACCCGTG +
Preference number: 2 (lower is better)
Translates to: EEILHMRRPAWLGGPPRAQEACV*SDCPPV
Trigger: CACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTG...GGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp GAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCCCAGGGACCCCAGGTTaGAGACAGATGGAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: EEILHMRRPAWLGGPPRAPGTPG*RQMEVG
Trigger: TCCCACCTCCATCTGTCTCCAACCTGGGGTCCCTGG...GGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR TCA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGAGCACGGTGCCCGTCATaGTGGATGCCTCCAGTTCCC +
Preference number: 2 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGARCPS*WMPPVP
Trigger: GGGAACTGGAGGCATCCATCATGACGGGCACCGTGC...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR-3UTR TCA 90 bp GCTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGCAGACTGTCCACCCGTaGTCGTCCAGAGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: AACIQKPHLCCAVPHPQKQTVHP*SSRGAG
Trigger: CCCAGCCCCTCTGGACGATCACGGGTGGACAGTCTG...CTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp AGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTGAGAGTGTGTCCTGAGAGCGTCAACTCCTaGCAGGCGGGTGGGCGGGCT +
Preference number: 2 (lower is better)
Translates to: SPGVNAVFPSREALRVCPESVNS*QAGGRA
Trigger: AGCCCGCCCACCCGCCTGCCAGGAGTTGACGCTCTC...AGGACACACTCTCAGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR-3UTR CCA 90 bp GAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGACGCCGCCTCCACGGTGGGCTaGCCCATCAGGGCGCACAGT +
Preference number: 2 (lower is better)
Translates to: ESPTFRIKGPALPGIPDAASTVG*PIRAHS
Trigger: ACTGTGCGCCCTGATGGGCCAGCCCACCGTGGAGGC...GGCGTCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR CAA 90 bp CAGCAAGCTCTTGCAAAGCGCTTAGAGCAAGGCCTGCTGCCTCCCTaGGCCTTCCCCCTGCCTACACCACTCCCAAGACAGAGTACTCGC +
Preference number: 2 (lower is better)
Translates to: QQALAKRLEQGLLPP*AFPLPTPLPRQSTR
Trigger: GCGAGTACTCTGTCTTGGGAGTGGTGTAGGCAGGGGGAAGGCCAAGGGAGGCAGCAGGCCTTGCTCTAAGCGCTTTGCAAGAGCTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR TCA 90 bp AGTGGCTCCCCATCAGGAAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGATGCCAGACCAACAGATaGATGAGTGGGTGGCCGCTT +
Preference number: 2 (lower is better)
Translates to: SGSPSGSQPPSACARIMGCQTNR*MSGWPL
Trigger: AAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCA...TCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTTCCTGATGGGGAGCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR TCA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCATGGAGGGGCTTGGGCTaGGCGGACGTGCAGATGGGT +
Preference number: 2 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPWRGLG*ADVQMG
Trigger: ACCCATCTGCACGTCCGCTCAGCCCAAGCCCCTCCA...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR TCA 90 bp GGGCTCTTGGCTTTCACTTGGTGCCCTGTGACAGGTAGACAGTGCCCTTTCACTTGGAGGGGCTTGGGCTaGGCGGACGTGCAGATGGGT +
Preference number: 2 (lower is better)
Translates to: GLLAFTWCPVTGRQCPFTWRGLG*ADVQMG
Trigger: ACCCATCTGCACGTCCGCTCAGCCCAAGCCCCTCCA...AGTGAAAGGGCACTGTCTACCTGTCACAGGGCACCAAGTGAAAGCCAAGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR TCA 90 bp AAGCCACTGCAACCCCTGGTGGGACAAAGACTTAGACGAGGGCCCCAAACAGACAGATGGTTCCGGCCCTaGCCAGGAGGCCTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: KPLQPLVGQRLRRGPQTDRWFRP*PGGLCL
Trigger: CAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCT...GTCTGTTTGGGGCCCTCGTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp CCAGCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTGCCCGTCATGATGGATaGCTCCAGTTCCCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: PAPACSPPVTENSLLLAAARHDG*LQFPQQ
Trigger: CTGCTGAGGGAACTGGAGGCATCCATCATGACGGGC...AGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR-3UTR CCA 90 bp TTCTGGGAATCTCAGAATCTCAGGACTAGCAAGCCCCAAACCCCTATTCTGGAGGGCGGGTGGGCGGGCTaGGGCCTGAGGAGTCTTCGG +
Preference number: 2 (lower is better)
Translates to: FWESQNLRTSKPQTPILEGGWAG*GLRSLR
Trigger: CCGAAGACTCCTCAGGCCCCAGCCCGCCCACCCGCC...CTCCAGAATAGGGGTTTGGGGCTTGCTAGTCCTGAGATTCTGAGATTCCCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR-3UTR CCA 90 bp AGAGATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCCTCCTCTGGGCATCTTaGAGACCCAACTTGGCGAGA +
Preference number: 2 (lower is better)
Translates to: RDGSGPDQEACVCSDCPPLLWAS*RPNLAR
Trigger: TCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAG...GGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp CGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCGAGGAGGTGCAGATGGGTCAGTaGCCACACGGCCTACAGAAG +
Preference number: 2 (lower is better)
Translates to: RGPDCILLGEWQRPQPEEVQMGQ*PHGLQK
Trigger: CTTCTGTAGGCCGTGTGGCCACTGACCCATCTGCAC...CTCCTCGGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp GGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCGCATCTTCCCTCGCCTaGAGTCCTGGAGTCAATGCA +
Preference number: 2 (lower is better)
Translates to: GMAGRPTAGLIAYFWENGASSLA*SPGVNA
Trigger: TGCATTGACTCCAGGACTCCAGGCGAGGGAAGATGC...GCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR CAA 90 bp TTCAAGTCGGGGATGAACCATCCCCATGAGAAGCCAGAAGAAATATaGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCC +
Preference number: 2 (lower is better)
Translates to: FKSGMNHPHEKPEEI*HMRRPAWLGGPPRA
Trigger: GGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTCATGGGGATGGTTCATCCCCGACTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR TCA 90 bp CCCATCAGGAAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAATGCCTCAAGACCAACAGATGAATaGGTGGGTGGCCGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: PIRKPTPKRVCTHHGNASRPTDE*VGGRFS
Trigger: GGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCT...TGAGGCATTCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTTCCTGATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR TCA 90 bp CGGAGTGGGGGAAAGGGTAGAGGGGGAGCAAACCTGATTGCCCTTCTCCCACTCTCATACCCCAATGCATaGCTGCGCTGGGGTATCCAG +
Preference number: 2 (lower is better)
Translates to: RSGGKGRGGANLIALLPLSYPNA*LRWGIQ
Trigger: CTGGATACCCCAGCGCAGTCATGCATTGGGGTATGA...GAGTGGGAGAAGGGCAATCAGGTTTGCTCCCCCTCTACCCTTTCCCCCACTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp GGCGCTCACTGGGGAAAGGTGTCAGGAAATTTCAAGTCGGGGATGAACCATCCCTCGAGGGCCACCCTCTaGACGGTGCCCGTCATGATG +
Preference number: 2 (lower is better)
Translates to: GAHWGKVSGNFKSGMNHPSRATL*TVPVMM
Trigger: CATCATGACGGGCACCGTGCAGAGGGTGGCCCTCGA...GGGATGGTTCATCCCCGACTTGAAATTTCCTGACACCTTTCCCCAGTGAGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR-3UTR GCA 90 bp CCAAGGCCCATAGAGCCTGCCCAATGGGCCCAGAACCACAGTCTCAAGTCCCAGTGCAGGGTCACCTTGTaGATCTCCAAGGGTGTAGGC +
Preference number: 2 (lower is better)
Translates to: PRPIEPAQWAQNHSLKSQCRVTL*ISKGVG
Trigger: GCCTACACCCTTGGAGATGCACAAGGTGACCCTGCA...CTGGGACTTGAGACTGTGGTTCTGGGCCCATTGGGCAGGCTCTATGGGCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR-3UTR CCA 90 bp AAGCCACTGCAACCCCTGGTGGGACAAAGACTTAGACGAGGGCCCCAAACAGACTCCCGTGTACGGACGTaGTTGACCTGCAGGACCCTG +
Preference number: 2 (lower is better)
Translates to: KPLQPLVGQRLRRGPQTDSRVRT*LTCRTL
Trigger: CAGGGTCCTGCAGGTCAACCACGTCCGTACACGGGA...GTCTGTTTGGGGCCCTCGTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR-3UTR CCA 90 bp TGGCTTGTGTTCAAGCCCTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCAGAGCGGACGTGCAGATaGGTCAGTGGCCACACGGCC +
Preference number: 2 (lower is better)
Translates to: WLVFKPWFHPLLPVWTWAERTCR*VSGHTA
Trigger: GGCCGTGTGGCCACTGACCCATCTGCACGTCCGCTC...TGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAGGGCTTGAACACAAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp ATTCTACCTGCTACATGCCCAGCCCTGTACAGCTGGGAGATCTGGCAGCAGTCAATCGTCCAGAGGGGCTaGGGGTCCAACCCAGACAGG +
Preference number: 2 (lower is better)
Translates to: ILPATCPALYSWEIWQQSIVQRG*GSNPDR
Trigger: CCTGTCTGGGTTGGACCCCCAGCCCCTCTGGACGAT...TGACTGCTGCCAGATCTCCCAGCTGTACAGGGCTGGGCATGTAGCAGGTAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCATCCCCAAGGGGGCCTTaGTGGGTCGGCAGAGATGGT +
Preference number: 2 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPSPRGP*WVGRDG
Trigger: ACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGA...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp CGGAGTGGGGGAAAGGGTAGAGGGGGAGCAAACCTGATTGCCCTTCTCCCACTCGCATCTTCCCTCGCCTaGAGTCCTGGAGTCAATGCA +
Preference number: 2 (lower is better)
Translates to: RSGGKGRGGANLIALLPLASSLA*SPGVNA
Trigger: TGCATTGACTCCAGGACTCCAGGCGAGGGAAGATGC...GAGTGGGAGAAGGGCAATCAGGTTTGCTCCCCCTCTACCCTTTCCCCCACTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CAA 90 bp AGCAGCCTGTGCCAACCCTTCTTAAGGGAGGCTCCTCTGGGCATCTaGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTA +
Preference number: 2 (lower is better)
Translates to: SSLCQPFLREAPLGI*ETQLGERPQLSLQL
Trigger: TAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCTTAAGAAGGGTTGGCACAGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR-3UTR TCA 90 bp GCTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGAAGAAGCAGGAGGGCTaGGAGCCCAAGGCCCATAGA +
Preference number: 2 (lower is better)
Translates to: AACIQKPHLCCAVPHPQKKKQEG*EPKAHR
Trigger: TCTATGGGCCTTGGGCTCTCAGCCCTCCTGCTTCTT...CTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR TCA 90 bp TTCCCTCGCCTGGAGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTTCACTGGATGGCAGGTaGATGGAAGCTCCAGGGTCT +
Preference number: 2 (lower is better)
Translates to: FPRLESWSQCSFPKPRGPSLDGR*MEAPGS
Trigger: AGACCCTGGAGCTTCCATTCACCTGCCATCCAGTGA...AGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACTCCAGGCGAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp TTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTTTTTCTACCTCCCGGCCCCTCTaGCAAGGCCGGTGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: LNKHFGHPPLGKSVPSFSTSRPL*QGRWPG
Trigger: GCCTGGCCACCGGCCTTGGCAGAGGGGCCGGGAGGT...AGAAAAAGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR-3UTR GCA 90 bp GGGCTCTTGGCTTTCACTTGGTGCCCTGTGACAGGTAGACAGTGCCCTTTCACTGGGGTATCCAGCTCCTaGCTGCTCACCTCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: GLLAFTWCPVTGRQCPFTGVSSS*LLTSCD
Trigger: GTCACAGGAGGTGAGCAGGCAGGAGCTGGATACCCC...AGTGAAAGGGCACTGTCTACCTGTCACAGGGCACCAAGTGAAAGCCAAGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp CGGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCACGCATCATGGGAATaGCTCATACCCCAATGCATG +
Preference number: 2 (lower is better)
Translates to: RHGWEAHRGPDCILLGEWHASWE*LIPQCM
Trigger: CATGCATTGGGGTATGAGGCATTCCCATGATGCGTG...CCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp AGACCTGAGGCTGCCCTCCTGCCACTACCTTCCCAACCTGGGCTAAAGAGACTCGCCACACCTCTGCTGTaGTGTCCCTCACCCTCAAAA +
Preference number: 2 (lower is better)
Translates to: RPEAALLPLPSQPGLKRLATPLL*CPSPSK
Trigger: TTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGC...GAGTCTCTTTAGCCCAGGTTGGGAAGGTAGTGGCAGGAGGGCAGCCTCAGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp CAAGCCCCAAACCCCTATTCTGGAGAAGCGAAGGAGCTGGGCTCCCATCCGAAGGCTCCATGGCTTTGCTaGGAGGAAGTGCTCCCTACA +
Preference number: 2 (lower is better)
Translates to: QAPNPYSGEAKELGSHPKAPWLC*EEVLPT
Trigger: TGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGC...CTTCGGATGGGAGCCCAGCTCCTTCGCTTCTCCAGAATAGGGGTTTGGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCAGGGACCCCAGGTTaGAGACAGATGGAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPPGTPG*RQMEVG
Trigger: TCCCACCTCCATCTGTCTCCAACCTGGGGTCCCTGG...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp GGCGCTCACTGGGGAAAGGTGTCAGGAAATTTCAAGTCGGGGATGAACCATCCCCGCATGGGGTCCTTGTaGAGGGTCACCTTGTGCATC +
Preference number: 2 (lower is better)
Translates to: GAHWGKVSGNFKSGMNHPRMGSL*RVTLCI
Trigger: GATGCACAAGGTGACCCTGCACAAGGACCCCATGCG...GGGATGGTTCATCCCCGACTTGAAATTTCCTGACACCTTTCCCCAGTGAGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR-3UTR GCA 90 bp TGTGAGCTAAAGCCCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCCAGGAGGCCTGTGTCTaGTCAGACTGTCCACCCGTG +
Preference number: 2 (lower is better)
Translates to: CELKPLTLVPLSRYSLVFQEACV*SDCPPV
Trigger: CACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTG...GAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGGGCTTTAGCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp AGACCTGAGGCTGCCCTCCTGCCACTACCTTCCCAACCTGGGCTAAAGAGACTCACAGCTATGGCTGCTTaGATCCAGAAGCCACACCTC +
Preference number: 2 (lower is better)
Translates to: RPEAALLPLPSQPGLKRLTAMAA*IQKPHL
Trigger: GAGGTGTGGCTTCTGGATGCAAGCAGCCATAGCTGT...GAGTCTCTTTAGCCCAGGTTGGGAAGGTAGTGGCAGGAGGGCAGCCTCAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp TGGCTTGTGTTCAAGCCCTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCACTGAGGCTGCCCTCCTaGCACTACCTTCCCAACCTG +
Preference number: 2 (lower is better)
Translates to: WLVFKPWFHPLLPVWTWALRLPS*HYLPNL
Trigger: CAGGTTGGGAAGGTAGTGGCAGGAGGGCAGCCTCAG...TGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAGGGCTTGAACACAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp AAGCCACTGCAACCCCTGGTGGGACAAAGACTTAGACGAGGGCCCCAAACAGACCTCCTCTGGGCATCTTaGAGACCCAACTTGGCGAGA +
Preference number: 2 (lower is better)
Translates to: KPLQPLVGQRLRRGPQTDLLWAS*RPNLAR
Trigger: TCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAG...GTCTGTTTGGGGCCCTCGTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp TGTGAGCTAAAGCCCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCGAGAAGCGAAGGAGCTaGGCTCCCATCCGAAGCAGC +
Preference number: 2 (lower is better)
Translates to: CELKPLTLVPLSRYSLVFEKRRS*APIRSS
Trigger: GCTGCTTCGGATGGGAGCCCAGCTCCTTCGCTTCTC...GAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGGGCTTTAGCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp GGCGCTCACTGGGGAAAGGTGTCAGGAAATTTCAAGTCGGGGATGAACCATCCCGACCCCTGTGAGAACTaGGCCAGGCAAAGCACATCC +
Preference number: 2 (lower is better)
Translates to: GAHWGKVSGNFKSGMNHPDPCEN*ARQSTS
Trigger: GGATGTGCTTTGCCTGGCCCAGTTCTCACAGGGGTC...GGGATGGTTCATCCCCGACTTGAAATTTCCTGACACCTTTCCCCAGTGAGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp TGTGAGCTAAAGCCCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCCAGGTTGGAGACAGATaGAGGTGGGAGTGGGTGCCC +
Preference number: 2 (lower is better)
Translates to: CELKPLTLVPLSRYSLVFQVGDR*RWEWVP
Trigger: GGGCACCCACTCCCACCTCCATCTGTCTCCAACCTG...GAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGGGCTTTAGCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp AGACCTGAGGCTGCCCTCCTGCCACTACCTTCCCAACCTGGGCTAAAGAGACTCATGTTGCCCAGGGGCTaGATGATGGAAGCAAATGGC +
Preference number: 2 (lower is better)
Translates to: RPEAALLPLPSQPGLKRLMLPRG*MMEANG
Trigger: GCCATTTGCTTCCATCATCCAGCCCCTGGGCAACAT...GAGTCTCTTTAGCCCAGGTTGGGAAGGTAGTGGCAGGAGGGCAGCCTCAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CAA 90 bp ACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTaGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: TENSLLLAAHSSSMA*LGGSAPYIFDLSKE
Trigger: CTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR CAA 90 bp CCTAGTCTCCAGCCCCATTCCCCTCCCAGGCCTTCTTTCTCTTCCTaGAGACCGTCAAACTCGTTCCTATCTCAGGGCCTTTGCACTAGC +
Preference number: 2 (lower is better)
Translates to: PSLQPHSPPRPSFSS*RPSNSFLSQGLCTS
Trigger: GCTAGTGCAAAGGCCCTGAGATAGGAACGAGTTTGACGGTCTCAAGGAAGAGAAAGAAGGCCTGGGAGGGGAATGGGGCTGGAGACTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR TCA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCATCACTTGGTGCCCTGTaGCAGGTAGACAGTGCCCTT +
Preference number: 2 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPSLGAL*QVDSAL
Trigger: AAGGGCACTGTCTACCTGTCACAGGGCACCAAGTGA...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp GAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGACGCCTGCCTCATACCCCAATaGATGACTGCGCTGGGGTAT +
Preference number: 2 (lower is better)
Translates to: ESPTFRIKGPALPGIPDACLIPQ*MTALGY
Trigger: ATACCCCAGCGCAGTCATGCATTGGGGTATGAGGCA...GGCGTCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp TGGCTTGTGTTCAAGCCCTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCAATATGCAGGCACCACTaGCTGCCTCTGGCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: WLVFKPWFHPLLPVWTWAICRHH*LPLAFC
Trigger: GCAGAAAGCCAGAGGCAGGCAGTGGTGCCTGCATAT...TGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAGGGCTTGAACACAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp GAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGACGCCCGTGTGCACGCATCATaGGAATGCCTCATACCCCAA +
Preference number: 2 (lower is better)
Translates to: ESPTFRIKGPALPGIPDARVHAS*ECLIPQ
Trigger: TTGGGGTATGAGGCATTCCCATGATGCGTGCACACG...GGCGTCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp TGTGAGCTAAAGCCCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCCCCAAACCCCTATTCTaGAGAAGCGAAGGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: CELKPLTLVPLSRYSLVFPKPLF*RSEGAG
Trigger: CCCAGCTCCTTCGCTTCTCCAGAATAGGGGTTTGGG...GAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGGGCTTTAGCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp GGCGCTCACTGGGGAAAGGTGTCAGGAAATTTCAAGTCGGGGATGAACCATCCCTTGGACACCCTCCACTaGGCAAGAGTGTCCCATCTT +
Preference number: 2 (lower is better)
Translates to: GAHWGKVSGNFKSGMNHPLDTLH*ARVSHL
Trigger: AAGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAA...GGGATGGTTCATCCCCGACTTGAAATTTCCTGACACCTTTCCCCAGTGAGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp GGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGGGTCTCTGATTTGTaGACACTGAGGACAATGATT +
Preference number: 2 (lower is better)
Translates to: GMAGRPTAGLIAYFWENGRVSDL*TLRTMI
Trigger: AATCATTGTCCTCAGTGTCCACAAATCAGAGACCCT...GCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCAATGTTGCCCAGGGGCTaGATGATGGAAGCAAATGGC +
Preference number: 2 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPMLPRG*MMEANG
Trigger: GCCATTTGCTTCCATCATCCAGCCCCTGGGCAACAT...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CAA 90 bp ATGCCTACCTGCCTGCCTCTCTCTATGTGTACTGGGCCATGTGGCTaGTGTTCAAGCCCTGGTTCCATCCCTTACTACCTGTGTGGACTT +
Preference number: 2 (lower is better)
Translates to: MPTCLPLSMCTGPCG*CSSPGSIPYYLCGL
Trigger: AAGTCCACACAGGTAGTAAGGGATGGAACCAGGGCTTGAACACAAGCCACATGGCCCAGTACACATAGAGAGAGGCAGGCAGGTAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR TCA 90 bp GCTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGAAAGAACAGACCTCTTaGCTCCTCATCTGTTCCCTC +
Preference number: 2 (lower is better)
Translates to: AACIQKPHLCCAVPHPQKKEQTS*LLICSL
Trigger: GAGGGAACAGATGAGGAGTCAAGAGGTCTGTTCTTT...CTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp CAAAGAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGACTTGGAGACCCAACTTaGCGAGAGACCCCAGCTGTC +
Preference number: 2 (lower is better)
Translates to: QRITHFQNQRASTSWDPRLGDPT*RETPAV
Trigger: GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG...TCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp TTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGTAGCTCCATGGCTTTGCTaGGAGGAAGTGCTCCCTACA +
Preference number: 2 (lower is better)
Translates to: FLSHLPPSFSSSSTDLAVAPWLC*EEVLPT
Trigger: TGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGC...TACAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp TGGCTTGTGTTCAAGCCCTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCACTCATTCCAGCTCCATaGCTTTGCTGGGAGGAAGTG +
Preference number: 2 (lower is better)
Translates to: WLVFKPWFHPLLPVWTWALIPAP*LCWEEV
Trigger: CACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAG...TGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAGGGCTTGAACACAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp GAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCGATTTTAAGGGATGCTaGTGCTTCCAGATTTCAAGT +
Preference number: 2 (lower is better)
Translates to: EEILHMRRPAWLGGPPRADFKGC*CFQISS
Trigger: ACTTGAAATCTGGAAGCACCAGCATCCCTTAAAATC...GGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp GGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCGATTTTAAGGGATGCTaGTGCTTCCAGATTTCAAGT +
Preference number: 2 (lower is better)
Translates to: GMAGRPTAGLIAYFWENGDFKGC*CFQISS
Trigger: ACTTGAAATCTGGAAGCACCAGCATCCCTTAAAATC...GCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR TCA 90 bp AGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTGAGAGTGTGTCCTGACCCATACAGAAGCTaGCTCTTGCCAATCCATGAT +
Preference number: 2 (lower is better)
Translates to: SPGVNAVFPSREALRVCPDPYRS*LLPIHD
Trigger: ATCATGGATTGGCAAGAGTCAGCTTCTGTATGGGTC...AGGACACACTCTCAGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp CTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCAAATTACGTAACCTCTCTCTTGGAGACCCAACTTaGCGAGAGACCCCAGCTGTC +
Preference number: 2 (lower is better)
Translates to: LVPSLTTCVDLGKLRNLSLGDPT*RETPAV
Trigger: GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG...AGAGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp CTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCAAATTACGTAACCTCTCTGACCCCTGTGAGAACTaGGCCAGGCAAAGCACATCC +
Preference number: 2 (lower is better)
Translates to: LVPSLTTCVDLGKLRNLSDPCEN*ARQSTS
Trigger: GGATGTGCTTTGCCTGGCCCAGTTCTCACAGGGGTC...AGAGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp TCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGATGAGATGGAGGTGGGAGTaGGTGCCCCGTTTTCCTGAG +
Preference number: 2 (lower is better)
Translates to: SPWSLYPVTPLFSLLHLMRWRWE*VPRFPE
Trigger: CTCAGGAAAACGGGGCACCCACTCCCACCTCCATCT...CATCAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp ACTTCTTTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTGAGCTTCTCCAAACATaGGCCAGAAGCCCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: TSLNKHFGHPPLGKSVPSELLQT*ARSPPL
Trigger: GAGAGGAGGGCTTCTGGCGCATGTTTGGAGAAGCTC...AGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAAAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR-3UTR GCA 90 bp ATTCTACCTGCTACATGCCCAGCCCTGTACAGCTGGGAGATCTGGCAGCAGTCAGTCTTCAGGTCTCATTaGAAATGTCGCCTCTTGAGA +
Preference number: 2 (lower is better)
Translates to: ILPATCPALYSWEIWQQSVFRSH*KCRLLR
Trigger: TCTCAAGAGGCGACATTTGCAATGAGACCTGAAGAC...TGACTGCTGCCAGATCTCCCAGCTGTACAGGGCTGGGCATGTAGCAGGTAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp CTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCAAATTACGTAACCTCTCTCGTGTGCACGCATCATaGGAATGCCTCATACCCCAA +
Preference number: 2 (lower is better)
Translates to: LVPSLTTCVDLGKLRNLSRVHAS*ECLIPQ
Trigger: TTGGGGTATGAGGCATTCCCATGATGCGTGCACACG...AGAGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CAA 90 bp GCTTGTGTTCAAGCCCTGGTTCCATCCCTTACTACCTGTGTGGACTaGGGCAAATTACGTAACCTCTCTGTGCCTGTTTCCTCATCTGTA +
Preference number: 2 (lower is better)
Translates to: ACVQALVPSLTTCVD*GKLRNLSVPVSSSV
Trigger: TACAGATGAGGAAACAGGCACAGAGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAGGGCTTGAACACAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp CCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGTTTAAGGGATGCTGGTaGTTCCAGATTTCAAGTGGG +
Preference number: 2 (lower is better)
Translates to: PSPWSLYPVTPLFSLLHLFKGCW*FQISSG
Trigger: CCCACTTGAAATCTGGAAGCACCAGCATCCCTTAAA...CAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp TCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGATGTCACACAGCTATGGCTaGTTGCATCCAGAAGCCACA +
Preference number: 2 (lower is better)
Translates to: SPWSLYPVTPLFSLLHLMSHSYG*LHPEAT
Trigger: TGTGGCTTCTGGATGCAAGCAGCCATAGCTGTGTGA...CATCAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CAA 90 bp ACACAGCAAACAGGTAACAGACCCAGGGTGAAAAGAACAGACCTCTaGACTCCTCATCTGTTCCCTCAAATGGAAGAGCACTTTTCTGGC +
Preference number: 2 (lower is better)
Translates to: TQQTGNRPRVKRTDL*TPHLFPQMEEHFSG
Trigger: GCCAGAAAAGTGCTCTTCCATTTGAGGGAACAGATGAGGAGTCAAGAGGTCTGTTCTTTTCACCCTGGGTCTGTTACCTGTTTGCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR TCA 90 bp TCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGATGAAAGAACAGACCTCTTaGCTCCTCATCTGTTCCCTC +
Preference number: 2 (lower is better)
Translates to: SPWSLYPVTPLFSLLHLMKEQTS*LLICSL
Trigger: GAGGGAACAGATGAGGAGTCAAGAGGTCTGTTCTTT...CATCAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAGAGCCCAGCGAAGTaGAGGGGAGGGGTAAGGGAG +
Preference number: 2 (lower is better)
Translates to: GTFVFEQDPWCVVQSCSIQSPAK*RGGVRE
Trigger: CTCCCTTACCCCTCCCCTCCACTTCGCTGGGCTCTG...TATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAATGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CAA 90 bp AACATGTGTGGGTTGTGTTCTGGTGAGGTATTTCCCCCTCAACGTTaGCCAAACGCTTTACATTTTATAAAGGGCTTCCCGTCCAATCCC +
Preference number: 2 (lower is better)
Translates to: NMCGLCSGEVFPPQR*PNALHFIKGFPSNP
Trigger: GGGATTGGACGGGAAGCCCTTTATAAAATGTAAAGCGTTTGGCAAACGTTGAGGGGGAAATACCTCACCAGAACACAACCCACACATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR TCA 90 bp GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATATCATACCCCAATGCATaGCTGCGCTGGGGTATCCAG +
Preference number: 2 (lower is better)
Translates to: GTFVFEQDPWCVVQSCSISYPNA*LRWGIQ
Trigger: CTGGATACCCCAGCGCAGTCATGCATTGGGGTATGA...TATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAATGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CCA 90 bp GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACCCCACCCTTTGGGATaGACAAACTCGGGAGTCAGT +
Preference number: 2 (lower is better)
Translates to: GTFVFEQDPWCVVQSCSIPHPLG*TNSGVS
Trigger: ACTGACTCCCGAGTTTGTCCATCCCAAAGGGTGGGG...TATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAATGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATATTAGTTAGAGTCGGGTaGATCTTCCCTCGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: GTFVFEQDPWCVVQSCSILVRVG*IFPRLE
Trigger: CTCCAGGCGAGGGAAGATGCACCCGACTCTAACTAA...TATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAATGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR GCA 90 bp GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACTATGCCTACCTGCCTaGCTCTCTCTATGTGTACTG +
Preference number: 2 (lower is better)
Translates to: GTFVFEQDPWCVVQSCSILCLPA*LSLCVL
Trigger: CAGTACACATAGAGAGAGGCAGGCAGGTAGGCATAG...TATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAATGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR GCA 72 bp CCTCCCGGCCCCTCTGCCAAGGCCGGTGGCCAGGCCTaGCCTCGAGGGCCACCCTCTGCACGGTGCCCGTCA +
Preference number: 3 (lower is better)
Translates to: PPGPSAKAGGQA*PRGPPSARCPS
Trigger: TGACGGGCACCGTGCAGAGGGTGGCCCTCGAGGGCAGGCCTGGCCACCGGCCTTGGCAGAGGGGCCGGGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR CCA 72 bp GGAGACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTaGGTCGGCAGAGATGGTTCCGGCCCTGACCAGGAG +
Preference number: 3 (lower is better)
Translates to: GDSVGRSPRGPW*VGRDGSGPDQE
Trigger: CTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR TCA 72 bp GGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGGCCCTaGCCAGGAGGCCTGTGTCTGCTCAGACTGTCCACC +
Preference number: 3 (lower is better)
Translates to: GALVGRQRWFRP*PGGLCLLRLST
Trigger: GGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR GCA 72 bp GGCCGGCATGGCTGGGAGGCCCACCGCGGGCCTGATTaGATACTTTTGGGAGAATGGCAGAGGCCTCAGCCC +
Preference number: 3 (lower is better)
Translates to: GRHGWEAHRGPD*ILLGEWQRPQP
Trigger: GGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR CCA 72 bp GACCCTGTCGAAGGGCTGGAGGCCTCCACGGTGGGCTaGCCCATCAGGGCGCACAGTGTGGACATAGACACC +
Preference number: 3 (lower is better)
Translates to: DPVEGLEASTVG*PIRAHSVDIDT
Trigger: GGTGTCTATGTCCACACTGTGCGCCCTGATGGGCCAGCCCACCGTGGAGGCCTCCAGCCCTTCGACAGGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR GCA 72 bp CCCCTCCCACATGGAGGGGCTTGGGCTGAGCGGACGTaGAGATGGGTCAGTGGCCACACGGCCTACAGAAGA +
Preference number: 3 (lower is better)
Translates to: PLPHGGAWAERT*RWVSGHTAYRR
Trigger: TCTTCTGTAGGCCGTGTGGCCACTGACCCATCTGCACGTCCGCTCAGCCCAAGCCCCTCCATGTGGGAGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR TCA 72 bp CAGTGGCCACACGGCCTACAGAAGAAGCAGGAGGGCTaGGAGCCCAAGGCCCATAGAGCCTGCCCAATGGGC +
Preference number: 3 (lower is better)
Translates to: QWPHGLQKKQEG*EPKAHRACPMG
Trigger: GCCCATTGGGCAGGCTCTATGGGCCTTGGGCTCTCAGCCCTCCTGCTTCTTCTGTAGGCCGTGTGGCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR TCA 72 bp ACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCGTaGTCGTCCAGAGGGGCTGGGGGTCCAACCCAGACA +
Preference number: 3 (lower is better)
Translates to: TRRPVSAQTVHP*SSRGAGGPTQT
Trigger: TGTCTGGGTTGGACCCCCAGCCCCTCTGGACGATCACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR TCA 72 bp AGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCTaGTTGCATACTTTTGGGAGAATGGCAGAGGCCTCA +
Preference number: 3 (lower is better)
Translates to: RRPAWLGGPPRA*LHTFGRMAEAS
Trigger: TGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR GCA 72 bp TTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCTaGCTGGGTGGCCCCTTAGGAGTTCGGCCCACATGC +
Preference number: 3 (lower is better)
Translates to: FSSPATCLGARI*LGGPLGVRPTC
Trigger: GCATGTGGGCCGAACTCCTAAGGGGCCACCCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR GCA 72 bp AGAGATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTaGTCAGACTGTCCACCCGTGATCGTCCAGAGGGGC +
Preference number: 3 (lower is better)
Translates to: RDGSGPDQEACV*SDCPPVIVQRG
Trigger: GCCCCTCTGGACGATCACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR CCA 72 bp CCACATGGAGGGGCTTGGGCTGAGCGGACGTGCAGATaGGTCAGTGGCCACACGGCCTACAGAAGAAGCAGG +
Preference number: 3 (lower is better)
Translates to: PHGGAWAERTCR*VSGHTAYRRSR
Trigger: CCTGCTTCTTCTGTAGGCCGTGTGGCCACTGACCCATCTGCACGTCCGCTCAGCCCAAGCCCCTCCATGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR TCA 72 bp GCTGCGGCTTTCAGTCCCTCCTCTTTAGCCTTGGGCTaGCCTGCCAGAAGGGCAGAAAGCGGGTGGCGGAGT +
Preference number: 3 (lower is better)
Translates to: AAAFSPSSLALG*PARRAESGWRS
Trigger: ACTCCGCCACCCGCTTTCTGCCCTTCTGGCAGGTCAGCCCAAGGCTAAAGAGGAGGGACTGAAAGCCGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR GCA 72 bp CACATGACTCCAGGTCTTCGAGAGCTTCTCCAAACATaGGCCAGAAGCCCTCCTCTCGGGCAGGGCCAGGGG +
Preference number: 3 (lower is better)
Translates to: HMTPGLRELLQT*ARSPPLGQGQG
Trigger: CCCCTGGCCCTGCCCGAGAGGAGGGCTTCTGGCGCATGTTTGGAGAAGCTCTCGAAGACCTGGAGTCATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR CCA 72 bp CCCAGCTACGTGTCTGGGAGCCAGGATCTGCCTGGGTaGCCCCTTAGGAGTTCGGCCCACATGCTGACTTCA +
Preference number: 3 (lower is better)
Translates to: PSYVSGSQDLPG*PLRSSAHMLTS
Trigger: TGAAGTCAGCATGTGGGCCGAACTCCTAAGGGGCCACCCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR-3UTR CAA 90 bp AGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTGAGAGTGTGTCCTGTCCCCAAGGGGGCCTaGGTGGGTCGGCAGAGATGG +
Preference number: 3 (lower is better)
Translates to: SPGVNAVFPSREALRVCPVPKGA*VGRQRW
Trigger: CCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGAC...AGGACACACTCTCAGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CAA 90 bp CCCATCAGGAAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAATGCCTCATCTTGGAGACCCAACTaGGCGAGAGACCCCAGCTGT +
Preference number: 3 (lower is better)
Translates to: PIRKPTPKRVCTHHGNASSWRPN*ARDPSC
Trigger: ACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGA...TGAGGCATTCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTTCCTGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR TCA 72 bp CGCTGGGGTATCCAGCTCCTGCCTGCTCACCTCCTGTaGCCGAGAACTCACTCCTCCTTGCAGCTCATTCCA +
Preference number: 3 (lower is better)
Translates to: RWGIQLLPAHLL*PRTHSSLQLIP
Trigger: TGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGGATACCCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR TCA 72 bp CGAAGCAGCATCCTTCCTGGTGGCCGAGTCTCTAGATaGAGTGGCTCCCCATCAGGAAGCCAACCCCCAAGC +
Preference number: 3 (lower is better)
Translates to: RSSILPGGRVSR*SGSPSGSQPPS
Trigger: GCTTGGGGGTTGGCTTCCTGATGGGGAGCCACTTCATCTAGAGACTCGGCCACCAGGAAGGATGCTGCTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR TCA 72 bp ACCATCCCCATGAGAAGCCAGAAGAAATATTGCATATaGGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGG +
Preference number: 3 (lower is better)
Translates to: TIPMRSQKKYCI*GGRHGWEAHRG
Trigger: CCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTCATGGGGATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR GCA 72 bp ACCCCAATGCATGACTGCGCTGGGGTATCCAGCTCCTaGCTGCTCACCTCCTGTGACCGAGAACTCACTCCT +
Preference number: 3 (lower is better)
Translates to: TPMHDCAGVSSS*LLTSCDRELTP
Trigger: AGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGGATACCCCAGCGCAGTCATGCATTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR GCA 72 bp CGTGTGCACGCATCATGGGAATGCCTCATACCCCAATaGATGACTGCGCTGGGGTATCCAGCTCCTGCCTGC +
Preference number: 3 (lower is better)
Translates to: RVHASWECLIPQ*MTALGYPAPAC
Trigger: GCAGGCAGGAGCTGGATACCCCAGCGCAGTCATGCATTGGGGTATGAGGCATTCCCATGATGCGTGCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR CCA 72 bp CAGGAAGCCAACCCCCAAGCGCGTGTGCACGCATCATaGGAATGCCTCATACCCCAATGCATGACTGCGCTG +
Preference number: 3 (lower is better)
Translates to: QEANPQARVHAS*ECLIPQCMTAL
Trigger: CAGCGCAGTCATGCATTGGGGTATGAGGCATTCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CAA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCAGCTCCTCTGGGCATCTaGGAGACCCAACTTGGCGAG +
Preference number: 3 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPAPLGI*ETQLGE
Trigger: CTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGC...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CAA 90 bp GGGCTCTTGGCTTTCACTTGGTGCCCTGTGACAGGTAGACAGTGCCCTTTCACTGCTCCTCTGGGCATCTaGGAGACCCAACTTGGCGAG +
Preference number: 3 (lower is better)
Translates to: GLLAFTWCPVTGRQCPFTAPLGI*ETQLGE
Trigger: CTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGC...AGTGAAAGGGCACTGTCTACCTGTCACAGGGCACCAAGTGAAAGCCAAGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CAA 90 bp TGTGAGCTAAAGCCCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTCCAGGGACCCCAGGTaGGAGACAGATGGAGGTGGG +
Preference number: 3 (lower is better)
Translates to: CELKPLTLVPLSRYSLVFSRDPR*ETDGGG
Trigger: CCCACCTCCATCTGTCTCCAACCTGGGGTCCCTGGA...GAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGGGCTTTAGCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR TCA 72 bp ATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATaGGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGT +
Preference number: 3 (lower is better)
Translates to: IPGSESARPTDE*VGGRFSSPATC
Trigger: ACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR TCA 72 bp CATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATaGATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTAC +
Preference number: 3 (lower is better)
Translates to: HHPRLRVCQTNR*MSGWPLLQPSY
Trigger: GTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR TCA 72 bp CCCGGGCCCATGAGCTCTTGGCTCTACTGGCTCTACTaGTTCTACCTGCTACATGCCCAGCCCTGTACAGCT +
Preference number: 3 (lower is better)
Translates to: PGPMSSWLYWLY*FYLLHAQPCTA
Trigger: AGCTGTACAGGGCTGGGCATGTAGCAGGTAGAATCAGTAGAGCCAGTAGAGCCAAGAGCTCATGGGCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR GCA 72 bp TCCAGGAGGCCATCTGAGACGCTGAAACCAAAGTCATaGCGCATGGGGTCCTTGTGCAGGGTCACCTTGTGC +
Preference number: 3 (lower is better)
Translates to: SRRPSETLKPKS*RMGSLCRVTLC
Trigger: GCACAAGGTGACCCTGCACAAGGACCCCATGCGGCATGACTTTGGTTTCAGCGTCTCAGATGGCCTCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR GCA 72 bp AGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTaGTCCCTACATCTTCGACCTCTCCAAGGAGGCCCC +
Preference number: 3 (lower is better)
Translates to: SSFQLHGFAGRK*SLHLRPLQGGP
Trigger: GGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR GCA 72 bp CTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTaGAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: LLTSCDRELTPP*SSFQLHGFAGR
Trigger: CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR GCA 72 bp CAATGCATGACTGCGCTGGGGTATCCAGCTCCTGCCTaGTCACCTCCTGTGACCGAGAACTCACTCCTCCTT +
Preference number: 3 (lower is better)
Translates to: QCMTALGYPAPA*SPPVTENSLLL
Trigger: AAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGGATACCCCAGCGCAGTCATGCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR GCA 72 bp GAGCCACCTGTCCAAGGTCACACAGCTATGGCTGCTTaGATCCAGAAGCCACACCTCTGCTGTGCTGTCCCT +
Preference number: 3 (lower is better)
Translates to: EPPVQGHTAMAA*IQKPHLCCAVP
Trigger: AGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAGCCATAGCTGTGTGACCTTGGACAGGTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR CCA 72 bp GTTAGAGTCGGGTGCATCTTCCCTCGCCTGGAGTCCTaGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCT +
Preference number: 3 (lower is better)
Translates to: VRVGCIFPRLES*SQCSFPKPRGP
Trigger: AGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACTCCAGGCGAGGGAAGATGCACCCGACTCTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CAA 90 bp GGCGCTCACTGGGGAAAGGTGTCAGGAAATTTCAAGTCGGGGATGAACCATCCCTCTTGGAGACCCAACTaGGCGAGAGACCCCAGCTGT +
Preference number: 3 (lower is better)
Translates to: GAHWGKVSGNFKSGMNHPSWRPN*ARDPSC
Trigger: ACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGA...GGGATGGTTCATCCCCGACTTGAAATTTCCTGACACCTTTCCCCAGTGAGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR TCA 72 bp CCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGTaGGGGCTCTTGGCTTTCACTTGGTGCCCTGTGACA +
Preference number: 3 (lower is better)
Translates to: PHLCCAVPHPQK*GLLAFTWCPVT
Trigger: TGTCACAGGGCACCAAGTGAAAGCCAAGAGCCCTCACTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR GCA 72 bp ACGCTGAAACCAAAGTCATGCCGCATGGGGTCCTTGTaGAGGGTCACCTTGTGCATCTCCAAGGGTGTAGGC +
Preference number: 3 (lower is better)
Translates to: TLKPKSCRMGSL*RVTLCISKGVG
Trigger: GCCTACACCCTTGGAGATGCACAAGGTGACCCTGCACAAGGACCCCATGCGGCATGACTTTGGTTTCAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR GCA 72 bp TATGGCTGCTTGCATCCAGAAGCCACACCTCTGCTGTaGTGTCCCTCACCCTCAAAAGTGAGGGCTCTTGGC +
Preference number: 3 (lower is better)
Translates to: YGCLHPEATPLL*CPSPSKVRALG
Trigger: GCCAAGAGCCCTCACTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAGCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CAA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACACAGCTATGGCTGCTaGCATCCAGAAGCCACACCT +
Preference number: 3 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPHSYGC*HPEATP
Trigger: AGGTGTGGCTTCTGGATGCAAGCAGCCATAGCTGTG...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR GCA 72 bp CACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTaGTGGGAGGAAGTGCTCCCTACATCTTCGACCTCT +
Preference number: 3 (lower is better)
Translates to: HSSLQLIPAPWL*WEEVLPTSSTS
Trigger: AGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR GCA 72 bp TTGAGACCGTCAAACTCGTTCCTATCTCAGGGCCTTTaGACTAGCTGTGCCCGCTGCCTGAGACACTCTTCC +
Preference number: 3 (lower is better)
Translates to: LRPSNSFLSQGL*TSCARCLRHSS
Trigger: GGAAGAGTGTCTCAGGCAGCGGGCACAGCTAGTGCAAAGGCCCTGAGATAGGAACGAGTTTGACGGTCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CCA 72 bp TCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTaGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCA +
Preference number: 3 (lower is better)
Translates to: SSLQLIPAPWLC*EEVLPTSSTSP
Trigger: TGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR CCA 72 bp AGAATCTCAGGACTAGCAAGCCCCAAACCCCTATTCTaGAGAAGCGAAGGAGCTGGGCTCCCATCCGAAGCA +
Preference number: 3 (lower is better)
Translates to: RISGLASPKPLF*RSEGAGLPSEA
Trigger: TGCTTCGGATGGGAGCCCAGCTCCTTCGCTTCTCCAGAATAGGGGTTTGGGGCTTGCTAGTCCTGAGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR CCA 72 bp GCCTATGCCTACCTGCCTGCCTCTCTCTATGTGTACTaGGCCATGTGGCTTGTGTTCAAGCCCTGGTTCCAT +
Preference number: 3 (lower is better)
Translates to: AYAYLPASLYVY*AMWLVFKPWFH
Trigger: ATGGAACCAGGGCTTGAACACAAGCCACATGGCCCAGTACACATAGAGAGAGGCAGGCAGGTAGGCATAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CCA 72 bp TCACTCAGGGGTACACAGCAAGTCCATGAAAGAACCTaGATTCGCACCCGGGCCCATGAGCTCTTGGCTCTA +
Preference number: 3 (lower is better)
Translates to: SLRGTQQVHERT*IRTRAHELLAL
Trigger: TAGAGCCAAGAGCTCATGGGCCCGGGTGCGAATCCAGGTTCTTTCATGGACTTGCTGTGTACCCCTGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CAA 90 bp CAAAGAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGATCCAGCTCCATGGCTTaGCTGGGAGGAAGTGCTCCC +
Preference number: 3 (lower is better)
Translates to: QRITHFQNQRASTSWDPRSSSMA*LGGSAP
Trigger: GGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGA...TCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CAA 90 bp CGGAGTGGGGGAAAGGGTAGAGGGGGAGCAAACCTGATTGCCCTTCTCCCACTCAAAAGAACAGACCTCTaGACTCCTCATCTGTTCCCT +
Preference number: 3 (lower is better)
Translates to: RSGGKGRGGANLIALLPLKRTDL*TPHLFP
Trigger: AGGGAACAGATGAGGAGTCAAGAGGTCTGTTCTTTT...GAGTGGGAGAAGGGCAATCAGGTTTGCTCCCCCTCTACCCTTTCCCCCACTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CAA 90 bp AGACCTGAGGCTGCCCTCCTGCCACTACCTTCCCAACCTGGGCTAAAGAGACTCAAGCCAGAAGAAATATaGCATATGAGGAGGCCGGCA +
Preference number: 3 (lower is better)
Translates to: RPEAALLPLPSQPGLKRLKPEEI*HMRRPA
Trigger: TGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTT...GAGTCTCTTTAGCCCAGGTTGGGAAGGTAGTGGCAGGAGGGCAGCCTCAGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR GCA 72 bp ACCAGGATGATTGGAGGTGATGCTCTTGGCCTTAGGTaGTCACCTGCTGCGGCTTTCAGTCCCTCCTCTTTA +
Preference number: 3 (lower is better)
Translates to: TRMIGGDALGLR*SPAAAFSPSSL
Trigger: TAAAGAGGAGGGACTGAAAGCCGCAGCAGGTGAGCACCTAAGGCCAAGAGCATCACCTCCAATCATCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR GCA 72 bp GAGGTTCCCACATGGAGGCTCACAGAGGAAGCAGCTTaGTCACTCAGGGGTACACAGCAAGTCCATGAAAGA +
Preference number: 3 (lower is better)
Translates to: EVPTWRLTEEAA*SLRGTQQVHER
Trigger: TCTTTCATGGACTTGCTGTGTACCCCTGAGTGAGCAAGCTGCTTCCTCTGTGAGCCTCCATGTGGGAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CCA 72 bp TCCTCATCTGTTCCCTCAAATGGAAGAGCACTTTTCTaGCCTCCAGGGACCCCAGGTTGGAGACAGATGGAG +
Preference number: 3 (lower is better)
Translates to: SSSVPSNGRALF*PPGTPGWRQME
Trigger: CTCCATCTGTCTCCAACCTGGGGTCCCTGGAGGCCAGAAAAGTGCTCTTCCATTTGAGGGAACAGATGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR TCA 72 bp CATAGACACCTTTTTCCAGGAGGCCATCTGAGACGCTaGAACCAAAGTCATGCCGCATGGGGTCCTTGTGCA +
Preference number: 3 (lower is better)
Translates to: HRHLFPGGHLRR*NQSHAAWGPCA
Trigger: TGCACAAGGACCCCATGCGGCATGACTTTGGTTTCAGCGTCTCAGATGGCCTCCTGGAAAAAGGTGTCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR CCA 72 bp TACCTGCCTGCCTCTCTCTATGTGTACTGGGCCATGTaGCTTGTGTTCAAGCCCTGGTTCCATCCCTTACTA +
Preference number: 3 (lower is better)
Translates to: YLPASLYVYWAM*LVFKPWFHPLL
Trigger: TAGTAAGGGATGGAACCAGGGCTTGAACACAAGCCACATGGCCCAGTACACATAGAGAGAGGCAGGCAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR TCA 72 bp TGGAATAAACCATTGTCCCCATCAAGGCCACCAGGATaGTTGGAGGTGATGCTCTTGGCCTTAGGTGCTCAC +
Preference number: 3 (lower is better)
Translates to: WNKPLSPSRPPG*LEVMLLALGAH
Trigger: GTGAGCACCTAAGGCCAAGAGCATCACCTCCAATCATCCTGGTGGCCTTGATGGGGACAATGGTTTATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR GCA 72 bp TCTCCATGGAGGCTGGCTCCTGTCTTCAGGTCTCATTaGAAATGTCGCCTCTTGAGAGAAACCCCTCCTAAT +
Preference number: 3 (lower is better)
Translates to: SPWRLAPVFRSH*KCRLLRETPPN
Trigger: ATTAGGAGGGGTTTCTCTCAAGAGGCGACATTTGCAATGAGACCTGAAGACAGGAGCCAGCCTCCATGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CCA 72 bp AAAGGTAGGTATTTTCCCAGGTTAGAGGTTCCCACATaGAGGCTCACAGAGGAAGCAGCTTGCTCACTCAGG +
Preference number: 3 (lower is better)
Translates to: KGRYFPRLEVPT*RLTEEAACSLR
Trigger: CCTGAGTGAGCAAGCTGCTTCCTCTGTGAGCCTCCATGTGGGAACCTCTAACCTGGGAAAATACCTACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR-3UTR CAA 90 bp GGCGCTCACTGGGGAAAGGTGTCAGGAAATTTCAAGTCGGGGATGAACCATCCCTATCCCGTTACTCCCTaGTTTTCTTTGTTGCACTTG +
Preference number: 3 (lower is better)
Translates to: GAHWGKVSGNFKSGMNHPYPVTP*FSLLHL
Trigger: CAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATA...GGGATGGTTCATCCCCGACTTGAAATTTCCTGACACCTTTCCCCAGTGAGCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR TCA 72 bp CTTTTTAACATCCAACATGTGTGGGTTGTGTTCTGGTaGGGTATTTCCCCCTCAACGTTTGCCAAACGCTTT +
Preference number: 3 (lower is better)
Translates to: LFNIQHVWVVFW*GISPSTFAKRF
Trigger: AAAGCGTTTGGCAAACGTTGAGGGGGAAATACCTCACCAGAACACAACCCACACATGTTGGATGTTAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR GCA 72 bp TGCTTACTTGTTGATTGTCTGCCTGCCACCAGAATGTaGAGACATGACCTAAATCTGTCTGATTCATGTTGC +
Preference number: 3 (lower is better)
Translates to: CLLVDCLPATRM*RHDLNLSDSCC
Trigger: GCAACATGAATCAGACAGATTTAGGTCATGTCTGCACATTCTGGTGGCAGGCAGACAATCAACAAGTAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR TCA 72 bp ACAGTCTCAAGTCCCAGAAGCTTCAGACTGAGATGCTaGAATCAAAGAATCACCCACTTTCAGAATCAAAGG +
Preference number: 3 (lower is better)
Translates to: TVSSPRSFRLRC*NQRITHFQNQR
Trigger: CCTTTGATTCTGAAAGTGGGTGATTCTTTGATTTCAGCATCTCAGTCTGAAGCTTCTGGGACTTGAGACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CATCACCCGCCTCGGCCAGGAGTGGCACCGCCAGGCAGCAGTCGAAGTCCCGTGGCCTCCACGGTGGGCTaGCCCATCAGGGCGCACAGT +
Preference number: 4 (lower is better)
Translates to: HHPPRPGVAPPGSSRSPVASTVG*PIRAHS
Trigger: ACTGTGCGCCCTGATGGGCCAGCCCACCGTGGAGGC...CACGGGACTTCGACTGCTGCCTGGCGGTGCCACTCCTGGCCGAGGCGGGTGATG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR CCA 90 bp GACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCAGTGGGGCCTGGCCCTaGCCTCTGGGTCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: DSVGRSPRGPWWVGRDGSSGAWP*PLGPRP
Trigger: GGGTCTGGGACCCAGAGGCCAGGGCCAGGCCCCACT...GGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GAGGGGCTTGGGCTGAGCGGACGTGCAGATGGGTCAGTGGCCACACGGCCTACACGCCTGGCTCCAGGGTaGCCGTCCTGTGTGCCACGC +
Preference number: 4 (lower is better)
Translates to: EGLGLSGRADGSVATRPTRLAPG*PSCVPR
Trigger: GCGTGGCACACAGGACGGGCACCCTGGAGCCAGGCG...TGTAGGCCGTGTGGCCACTGACCCATCTGCACGTCCGCTCAGCCCAAGCCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GCCCTCGAGGGCCACCCTCTGCACGGTGCCCGTCATGATGGATGCCTCCAGTTCCCTGCAGGAGGTGGATaGCCTCGCTCAGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: ALEGHPLHGARHDGCLQFPAGGG*PRSAAG
Trigger: GCCGGCCGCTGAGCGAGGCCATCCACCTCCTGCAGG...GAACTGGAGGCATCCATCATGACGGGCACCGTGCAGAGGGTGGCCCTCGAGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR CCA 90 bp GATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCGTGGGCAGGGCCAGGGGCTaGGCTCGTTGGCGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: DGSGPDQEACVCSDCPPVGRARG*ARWRLP
Trigger: TGGGAGCCGCCAACGAGCCCAGCCCCTGGCCCTGCC...CACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCACCTCCCGGCCCCTCTaGCAAGGCCGGTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EEILHMRRPAWLGGPPRATSRPL*QGRWPG
Trigger: GCCTGGCCACCGGCCTTGGCAGAGGGGCCGGGAGGT...GGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGGGGCCCGGCTGCTGTGTGCCGTGTGCGGCTTGCGGCTGATGATCAGCTCCAAGCACGGCGTCCTCCATaGGGCAGTTGTCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: GGPAAVCRVRLAADDQLQARRPP*GSCPGG
Trigger: TCCGCCTGGACAACTGCCCCATGGAGGACGCCGTGC...TTGGAGCTGATCATCAGCCGCAAGCCGCACACGGCACACAGCAGCCGGGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR CCA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTCCTGCAGGAGGTGGATaGCCTCGCTCAGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSPAGGG*PRSAAG
Trigger: GCCGGCCGCTGAGCGAGGCCATCCACCTCCTGCAGG...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTCTCTGCCAAGGCCGGTaGCCAGGCCTGCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSLCQGR*PGLPSR
Trigger: CCTCGAGGGCAGGCCTGGCCACCGGCCTTGGCAGAG...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCGTGGGCATCCTGCAGTaGCCGGGCCGGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PTWRETPAVTPTRAGPPCVGILQ*PGRGLW
Trigger: CCACAGCCCCCGGCCCGGCCACTGCAGGATGCCCAC...GCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCTGCCTGGCAGGTGTGGCCCAGGTaGGCATCCTGCAGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: WVAASPAQLRVWEPGSAWQVWPR*ASCSGR
Trigger: CCGGCCACTGCAGGATGCCCACCTGGGCCACACCTG...CCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTCCGTGCCCGAAATGGTaGTGCCCAGGGGACCCCCGT +
Preference number: 4 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSPCPKW*CPGDPR
Trigger: ACGGGGGTCCCCTGGGCATCACCATTTCGGGCACGG...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp TGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCTGCCTGGCGGCGAGAAGCGGGCTaGTGGCAGGCCTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: WVAASPAQLRVWEPGSAWRREAG*WQASFQ
Trigger: CTGAAAGGAGGCCTGCCAGCAGCCCGCTTCTCGCCG...CCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCGAGGAGACCTCCCGGCCCCTCTaGCAAGGCCGGTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RGPDCILLGEWQRPQPEETSRPL*QGRWPG
Trigger: GCCTGGCCACCGGCCTTGGCAGAGGGGCCGGGAGGT...CTCCTCGGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCCCTGCAGGAGGTGGATaGCCTCGCTCAGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GMAGRPTAGLIAYFWENGPAGGG*PRSAAG
Trigger: GCCGGCCGCTGAGCGAGGCCATCCACCTCCTGCAGG...GCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGGCCCTGACCAGGAGGCCTCCACATGGAGGGGCTTaGGCTGAGCGGACGTGCAGA +
Preference number: 4 (lower is better)
Translates to: QGGLGGSAEMVPALTRRPPHGGA*AERTCR
Trigger: TCTGCACGTCCGCTCAGCCCAAGCCCCTCCATGTGG...AGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCCCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGGCCCTGACCAGGAGGCCTATCGTCCAGAGGGGCTaGGGGTCCAACCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: QGGLGGSAEMVPALTRRPIVQRG*GSNPDR
Trigger: CCTGTCTGGGTTGGACCCCCAGCCCCTCTGGACGAT...AGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCCCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCTGCTGGCCAGGAGCTTaGTGGCCTCAAGCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: DSVGRSPRGPWWVGRDGSCWPGA*WPQAAS
Trigger: GCTCGCTGCTTGAGGCCACCAAGCTCCTGGCCAGCA...GGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCTGCCACTGCTTGGGATaGCGGACTCCGCCACATCGA +
Preference number: 4 (lower is better)
Translates to: DSVGRSPRGPWWVGRDGSCHCLG*RTPPHR
Trigger: TCGATGTGGCGGAGTCCGTCATCCCAAGCAGTGGCA...GGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGGCCCTGACCAGGAGGCCTTGCCACTGCTTGGGATaGCGGACTCCGCCACATCGA +
Preference number: 4 (lower is better)
Translates to: QGGLGGSAEMVPALTRRPCHCLG*RTPPHR
Trigger: TCGATGTGGCGGAGTCCGTCATCCCAAGCAGTGGCA...AGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGAGGGGGAGCAAACCTaGTTGCCCTTCTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: DSVGRSPRGPWWVGRDGSEGEQT*LPFSHS
Trigger: GGAGTGGGAGAAGGGCAATCAGGTTTGCTCCCCCTC...GGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCTGCCTGGTCGAGGGCCACCCTCTaGACGGTGCCCGTCATGATG +
Preference number: 4 (lower is better)
Translates to: WVAASPAQLRVWEPGSAWSRATL*TVPVMM
Trigger: CATCATGACGGGCACCGTGCAGAGGGTGGCCCTCGA...CCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GCCCTCGAGGGCCACCCTCTGCACGGTGCCCGTCATGATGGATGCCTCCAGTTCCGGACGTGGTTGACCTaGAGGACCCTGTCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: ALEGHPLHGARHDGCLQFRTWLT*RTLSKG
Trigger: GCCCTTCGACAGGGTCCTGCAGGTCAACCACGTCCG...GAACTGGAGGCATCCATCATGACGGGCACCGTGCAGAGGGTGGCCCTCGAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR GCA 90 bp GATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCGTGAGGGCAGGACCTCCCTaGCTGGCACCCCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: DGSGPDQEACVCSDCPPVRAGPP*LAPQSP
Trigger: TGGTGACTGGGGTGCCAGGCAGGGAGGTCCTGCCCT...CACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CATCACCCGCCTCGGCCAGGAGTGGCACCGCCAGGCAGCAGTCGAAGTCCCGTGCGGCTGAGCAGCCTGTaGCAACCCTTCTTAAGGGAG +
Preference number: 4 (lower is better)
Translates to: HHPPRPGVAPPGSSRSPVRLSSL*QPFLRE
Trigger: CTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCG...CACGGGACTTCGACTGCTGCCTGGCGGTGCCACTCCTGGCCGAGGCGGGTGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR GCA 90 bp GAGGGGCTTGGGCTGAGCGGACGTGCAGATGGGTCAGTGGCCACACGGCCTACATGGGCTGAGCGGACGTaGAGATGGGTCAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: EGLGLSGRADGSVATRPTWAERT*RWVSGH
Trigger: GTGGCCACTGACCCATCTGCACGTCCGCTCAGCCCA...TGTAGGCCGTGTGGCCACTGACCCATCTGCACGTCCGCTCAGCCCAAGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CCCAGGCCTCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGCCCCAGGCACAAGCATaGAGGGCCCTCAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PRPLSSRLSSLCQPFLREPQAQA*RALREG
Trigger: GCCCTCCCTGAGGGCCCTGCATGCTTGTGCCTGGGG...CTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGAGGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AGGGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGCCCCAGGCACAAGCATaGAGGGCCCTCAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: REAPLGILETQLGERPQLPQAQA*RALREG
Trigger: GCCCTCCCTGAGGGCCCTGCATGCTTGTGCCTGGGG...CAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACGCCCGGCCCCACCGTaGTGGAGGCTAGCGACAACG +
Preference number: 4 (lower is better)
Translates to: EAPLGILETQLGERPQLSRPAPP*WRLATT
Trigger: CGTTGTCGCTAGCCTCCAGCACGGTGGGGCCGGGCG...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CCAAGGCCCATAGAGCCTGCCCAATGGGCCCAGAACCACAGTCTCAAGTCCCAGGGGCGGTGGCATGGCTaGCCCCGTGCAGCGGGATTC +
Preference number: 4 (lower is better)
Translates to: PRPIEPAQWAQNHSLKSQGRWHG*PRAAGF
Trigger: GAATCCCGCTGCACGGGGCCAGCCATGCCACCGCCC...CTGGGACTTGAGACTGTGGTTCTGGGCCCATTGGGCAGGCTCTATGGGCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGGGGTGGCCAGGGCGGTaGCATGGCTGGCCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: EEVLPTSSTSPRRPHRDLGWPGR*HGWPRA
Trigger: TGCACGGGGCCAGCCATGCCACCGCCCTGGCCACCC...CAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGAGGGTGGCCAGGGCGGTaGCATGGCTGGCCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGGWPGR*HGWPRA
Trigger: TGCACGGGGCCAGCCATGCCACCGCCCTGGCCACCC...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AGGGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGGCCACCTGCAGGAGGTaGATGGCCTCGCTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: REAPLGILETQLGERPQLATCRR*MASLSG
Trigger: GCCGCTGAGCGAGGCCATCCACCTCCTGCAGGTGGC...CAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCGAGAGCGTCAACTCCTaGCAGGCGGGTGGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: GMAGRPTAGLIAYFWENGESVNS*QAGGRA
Trigger: AGCCCGCCCACCCGCCTGCCAGGAGTTGACGCTCTC...GCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR CCA 90 bp AGAGCGTCAACTCCTGGCAGGCGGGTGGGCGGGCTGGGGCCTGAGGAGTCTTCGCTTGGAGACCCAACTTaGCGAGAGACCCCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: RASTPGRRVGGLGPEESSLGDPT*RETPAV
Trigger: GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG...CGAAGACTCCTCAGGCCCCAGCCCGCCCACCCGCCTGCCAGGAGTTGACGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR CCA 90 bp GACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGAGAAGCGAAGGAGCTaGGCTCCCATCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: DSVGRSPRGPWWVGRDGSEKRRS*APIRSS
Trigger: GCTGCTTCGGATGGGAGCCCAGCTCCTTCGCTTCTC...GGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCTGCCTGGCCACATGGAGGGGCTTaGGCTGAGCGGACGTGCAGA +
Preference number: 4 (lower is better)
Translates to: WVAASPAQLRVWEPGSAWPHGGA*AERTCR
Trigger: TCTGCACGTCCGCTCAGCCCAAGCCCCTCCATGTGG...CCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGGCCCTGACCAGGAGGCCTCAGGTTGGAGACAGATaGAGGTGGGAGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: QGGLGGSAEMVPALTRRPQVGDR*RWEWVP
Trigger: GGGCACCCACTCCCACCTCCATCTGTCTCCAACCTG...AGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATGTGGGCATCCTGCAGTaGCCGGGCCGGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: APACSPPVTENSLLLAAHVGILQ*PGRGLW
Trigger: CCACAGCCCCCGGCCCGGCCACTGCAGGATGCCCAC...ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCCAGGTGTGGCCCAGGTaGGCATCCTGCAGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVQVWPR*ASCSGR
Trigger: CCGGCCACTGCAGGATGCCCACCTGGGCCACACCTG...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCGTGGCGAAGATGCCGCCCTaGAGCTGGAGGCCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: DGSGPDQEACVCSDCPPVAKMPP*SWRPKP
Trigger: CGGCTTTGGCCTCCAGCTCCAGGGCGGCATCTTCGC...CACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGAGGCAGGGCCAGGGGCTaGGCTCGTTGGCGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGGRARG*ARWRLP
Trigger: TGGGAGCCGCCAACGAGCCCAGCCCCTGGCCCTGCC...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CAGAGTCTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGGGCAGGGCCAGGGGCTaGGCTCGTTGGCGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QSLPDQQMNEWVAASPAQGRARG*ARWRLP
Trigger: TGGGAGCCGCCAACGAGCCCAGCCCCTGGCCCTGCC...CTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTGCCTGCTGCCTCCCTTaGCCTTCCCCCTGCCTACAC +
Preference number: 4 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSACCLP*PSPCLH
Trigger: GTGTAGGCAGGGGGAAGGCCAAGGGAGGCAGCAGGC...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGGCCCTGACCAGGAGGCCTTCAGCTCCACCACAGTaGTCCCTCGGAACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: QGGLGGSAEMVPALTRRPSAPPQ*SLGTPL
Trigger: CAGAGGAGTTCCGAGGGATCACTGTGGTGGAGCTGA...AGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCTGCCTGGTGCCACTGCTTGGGATaGCGGACTCCGCCACATCGA +
Preference number: 4 (lower is better)
Translates to: WVAASPAQLRVWEPGSAWCHCLG*RTPPHR
Trigger: TCGATGTGGCGGAGTCCGTCATCCCAAGCAGTGGCA...CCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGCTCCACTGTGTAACTaGCGGCACCTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: DSVGRSPRGPWWVGRDGSAPLCN*RHLWSP
Trigger: TGGAGACCACAGGTGCCGTCAGTTACACAGTGGAGC...GGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CATCACCCGCCTCGGCCAGGAGTGGCACCGCCAGGCAGCAGTCGAAGTCCCGTGGGCCATCTGAGACGCTaGAACCAAAGTCATGCCGCA +
Preference number: 4 (lower is better)
Translates to: HHPPRPGVAPPGSSRSPVGHLRR*NQSHAA
Trigger: TGCGGCATGACTTTGGTTTCAGCGTCTCAGATGGCC...CACGGGACTTCGACTGCTGCCTGGCGGTGCCACTCCTGGCCGAGGCGGGTGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR TCA 90 bp GCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCTGGAGGGGCTTGGGCTaGGCGGACGTGCAGATGGGT +
Preference number: 4 (lower is better)
Translates to: AHRGPDCILLGEWQRPQPWRGLG*ADVQMG
Trigger: ACCCATCTGCACGTCCGCTCAGCCCAAGCCCCTCCA...GGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTGTCTCTCCAGCCACCTaGAGGAGGTGGATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSVSPAT*RRWMAS
Trigger: CGAGGCCATCCACCTCCTGCAGGTGGCTGGAGAGAC...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAATGCCTCATACCCCAATGCCGGTGGCCAGGCCTaGCCTCGAGGGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: KPTPKRVCTHHGNASYPNAGGQA*PRGPPS
Trigger: AGAGGGTGGCCCTCGAGGGCAGGCCTGGCCACCGGC...ATTGGGGTATGAGGCATTCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACGCCGGTGGCCAGGCCTaGCCTCGAGGGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: LLAAHSSSMALLGGSAPYAGGQA*PRGPPS
Trigger: AGAGGGTGGCCCTCGAGGGCAGGCCTGGCCACCGGC...GTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GCTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGACCTCCCGGCCCCTCTaGCAAGGCCGGTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: AACIQKPHLCCAVPHPQKTSRPL*QGRWPG
Trigger: GCCTGGCCACCGGCCTTGGCAGAGGGGCCGGGAGGT...CTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGACCTCCCGGCCCCTCTaGCAAGGCCGGTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGTSRPL*QGRWPG
Trigger: GCCTGGCCACCGGCCTTGGCAGAGGGGCCGGGAGGT...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CGGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGTCTCGGTGGCGAAGATaGCGCCCTGGAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RHGWEAHRGPDCILLGEWSRWRR*RPGAGG
Trigger: GCCTCCAGCTCCAGGGCGGCATCTTCGCCACCGAGA...CCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CCCAGGCCTCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGTCTCGGTGGCGAAGATaGCGCCCTGGAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PRPLSSRLSSLCQPFLRESRWRR*RPGAGG
Trigger: GCCTCCAGCTCCAGGGCGGCATCTTCGCCACCGAGA...CTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGAGGCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCAGCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTGACCTTGTGGGCCAGTaGGGCGTCCCGCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PAPACSPPVTENSLLLAADLVGQ*GVPQEL
Trigger: CAGCTCCTGCGGGACGCCGCACTGGCCCACAAGGTC...AGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCAGACCTTGTGGGCCAGTaGGGCGTCCCGCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: EAPLGILETQLGERPQLSDLVGQ*GVPQEL
Trigger: CAGCTCCTGCGGGACGCCGCACTGGCCCACAAGGTC...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCTCCCCCACCGTCAGGTaGAGGCGCTCATTAATACCC +
Preference number: 4 (lower is better)
Translates to: DSVGRSPRGPWWVGRDGSSPTVR*RRSLIP
Trigger: GGGTATTAATGAGCGCCTGCACCTGACGGTGGGGGA...GGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGGCCCTGACCAGGAGGCCTGCTCTTGGCCTTAGGTaGTCACCTGCTGCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QGGLGGSAEMVPALTRRPALGLR*SPAAAF
Trigger: GAAAGCCGCAGCAGGTGAGCACCTAAGGCCAAGAGC...AGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGCTCCTCTGGGCGGTGGCATGGCTaGCCCCGTGCAGCGGGATTC +
Preference number: 4 (lower is better)
Translates to: SLLSAEQPVPTLLKGGSSGRWHG*PRAAGF
Trigger: GAATCCCGCTGCACGGGGCCAGCCATGCCACCGCCC...AGAGGAGCCTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTGCACTGCCGCAGGGTaGCCAGGGCGGTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: APACSPPVTENSLLLAAHCTAAG*PGRWHG
Trigger: GCCATGCCACCGCCCTGGCCACCCTGCGGCAGTGCA...ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AGACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCGAAGGTGCCACTGCTTaGGATGACGGACTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: RQRGQVPKGALVGRQRWFEGATA*DDGLRH
Trigger: GTGGCGGAGTCCGTCATCCCAAGCAGTGGCACCTTC...GAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCCAGGCCTCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGCACGGCGTCCTCCATaGGGCAGTTGTCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: PRPLSSRLSSLCQPFLREARRPP*GSCPGG
Trigger: TCCGCCTGGACAACTGCCCCATGGAGGACGCCGTGC...CTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGAGGCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCCGAGAAGCGGGCTGCTaGCAGGCCTCCTTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: AHRGPDCILLGEWQRPQPREAGC*QASFQG
Trigger: GCCCTGAAAGGAGGCCTGCCAGCAGCCCGCTTCTCG...GGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTCAGCACTGTCCACACTaGGCACAGCCGGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSQHCPH*AQPARS
Trigger: GCTTCTCGCCGGCTGTGCCCAGTGTGGACAGTGCTG...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCCCGGGCTGCTGCCTGTaGTGTATAGGACCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVPGCCL*CIGPWA
Trigger: GGCCCAGGGTCCTATACACCACAGGCAGCAGCCCGG...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGCGAGGGGCCATAGGGTaGGTGGGCGGGCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGRGAIG*VGGQAG
Trigger: GCCTGCCTGCCCGCCCACCCACCCTATGGCCCCTCG...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR CCA 90 bp CCATCAGGAAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAATGCCTCATCCCAGGGCCCAGCGTTaGGCTCGAGGGGCCATAGGG +
Preference number: 4 (lower is better)
Translates to: PSGSQPPSACARIMGMPHPRAQR*ARGAIG
Trigger: CCCTATGGCCCCTCGAGCCCAACGCTGGGCCCTGGG...ATGAGGCATTCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTTCCTGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR CCA 90 bp TGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGACTCTGCCAAGGCCGGTaGCCAGGCCTGCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: CWEEVLPTSSTSPRRPHRLCQGR*PGLPSR
Trigger: CCTCGAGGGCAGGCCTGGCCACCGGCCTTGGCAGAG...TCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AGACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCTCCCGTGTACGGACGTaGTTGACCTGCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: RQRGQVPKGALVGRQRWFSRVRT*LTCRTL
Trigger: CAGGGTCCTGCAGGTCAACCACGTCCGTACACGGGA...GAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCTGGCCAGGAGCTTGGTaGCCTCAAGCAGCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: RQRGQVPKGALVGRQRWFWPGAW*PQAASS
Trigger: ACTGCTCGCTGCTTGAGGCCACCAAGCTCCTGGCCA...GAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCCAGGTGTGGCCCAGGTaGGCATCCTGCAGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: GRKCSLHLRPLQGGPTETQVWPR*ASCSGR
Trigger: CCGGCCACTGCAGGATGCCCACCTGGGCCACACCTG...GGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CGGAGTGGGGGAAAGGGTAGAGGGGGAGCAAACCTGATTGCCCTTCTCCCACTCCCTGGCCAGCAGGTGTaGCCCAGGTGGGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: RSGGKGRGGANLIALLPLPGQQV*PRWASC
Trigger: GCAGGATGCCCACCTGGGCCACACCTGCTGGCCAGG...GAGTGGGAGAAGGGCAATCAGGTTTGCTCCCCCTCTACCCTTTCCCCCACTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTGAAGCACACGAGGGGTaGGGAGGACAGGGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSEAHEG*GGQGLG
Trigger: ACCGAGACCCTGTCCTCCCCACCCCTCGTGTGCTTC...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTCCAGCACGACCTTGTaGGCCAGTGCGGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: GRKCSLHLRPLQGGPTETSSTTL*ASAASR
Trigger: GCGGGACGCCGCACTGGCCCACAAGGTCGTGCTGGA...GGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCATCCAGCACGACCTTGTaGGCCAGTGCGGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: EAPLGILETQLGERPQLSSSTTL*ASAASR
Trigger: GCGGGACGCCGCACTGGCCCACAAGGTCGTGCTGGA...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTCTTGTCGGTGCCACCTaGGATAGTCAGGCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSLVGAT*DSQAQR
Trigger: ACGCTGGGCCTGACTATCTCAGGTGGCACCGACAAG...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp CCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCGCACGGTGCCCGTCATaGTGGATGCCTCCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: PTWRETPAVTPTRAGPPCARCPS*WMPPVP
Trigger: GGGAACTGGAGGCATCCATCATGACGGGCACCGTGC...GCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTGTGTACGGACGTGGTTaGCCTGCAGGACCCTGTCGA +
Preference number: 4 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSVYGRG*PAGPCR
Trigger: TCGACAGGGTCCTGCAGGTCAACCACGTCCGTACAC...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp CATACCCCAATGCATGACTGCGCTGGGGTATCCAGCTCCTGCCTGCTCACCTCCCAGACTGTCCACCCGTaGTCGTCCAGAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HTPMHDCAGVSSSCLLTSQTVHP*SSRGAG
Trigger: CCCAGCCCCTCTGGACGATCACGGGTGGACAGTCTG...GGAGGTGAGCAGGCAGGAGCTGGATACCCCAGCGCAGTCATGCATTGGGGTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCGGCCTCAGTGGCCGCTaGCTCTGGGGCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFGLSGR*LWGTGR
Trigger: CCTGCCTGTGCCCCAGAGTCAGCGGCCACTGAGGCC...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCCACTTTCACTGCCTCTaGGGGCCTCAGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: EEILHMRRPAWLGGPPRAHFHCL*GPQWPL
Trigger: CAGCGGCCACTGAGGCCCTCAGAGGCAGTGAAAGTG...GGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCGACTGTCAGGCTCGATaGAGCACACGAGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GMAGRPTAGLIAYFWENGDCQAR*STRGVG
Trigger: CCCCACCCCTCGTGTGCTTCATCGAGCCTGACAGTC...GCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CCCAGGCCTCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGGGAGAGGCTCGCCATaGAGACCCTGGCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: PRPLSSRLSSLCQPFLREGRGSP*RPWPSP
Trigger: TGGTGAAGGCCAGGGTCTTCATGGCGAGCCTCTCCC...CTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGAGGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619221.4
CDS-3UTR TCA 90 bp CCAGCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTAGGGCCCATCGTCTTTaGGACGCCGCCTCACCACGC +
Preference number: 4 (lower is better)
Translates to: PAPACSPPVTENSLLLAARAHRL*DAASPR
Trigger: GCGTGGTGAGGCGGCGTCTCAAAGACGATGGGCCCT...AGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637182.1
CDS-3UTR GCA 90 bp GATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCGTGAGCGGGCGGGACTTGTaGCCATCTTCATGGGCACCT +
Preference number: 4 (lower is better)
Translates to: DGSGPDQEACVCSDCPPVSGRDL*PSSWAP
Trigger: AGGTGCCCATGAAGATGGGCACAAGTCCCGCCCGCT...CACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCGTGTGCCCAGCTCCACGCTaGGCTTCTTGGGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: DGSGPDQEACVCSDCPPVCPAPR*ASWAAS
Trigger: TGAAGCTGCCCAAGAAGCGCAGCGTGGAGCTGGGCA...CACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AGACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCGGTGCCCGTCCTGTGTaGCACGCTGCCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: RQRGQVPKGALVGRQRWFGARPV*HAAFLD
Trigger: ATCAAGAAAGGCAGCGTGGCACACAGGACGGGCACC...GAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCCACTGCCGCAGGATTTaGACGGCGTCCTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: AHRGPDCILLGEWQRPQPHCRRI*TASSMG
Trigger: CCCCATGGAGGACGCCGTGCAAATCCTGCGGCAGTG...GGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GGGGGCCCGGCTGCTGTGTGCCGTGTGCGGCTTGCGGCTGATGATCAGCTCCAAGAGCTTCTCCAAACATaGGCCAGAAGCCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GGPAAVCRVRLAADDQLQELLQT*ARSPPL
Trigger: GAGAGGAGGGCTTCTGGCGCATGTTTGGAGAAGCTC...TTGGAGCTGATCATCAGCCGCAAGCCGCACACGGCACACAGCAGCCGGGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR GCA 90 bp CCCAGGCCTCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGCGGACGTGGTTGACCTaGAGGACCCTGTCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PRPLSSRLSSLCQPFLRERTWLT*RTLSKG
Trigger: GCCCTTCGACAGGGTCCTGCAGGTCAACCACGTCCG...CTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGAGGCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCGTGCTGCTGTGTGCCGTGTaGGGCTTGCGGCTGATGATC +
Preference number: 4 (lower is better)
Translates to: DGSGPDQEACVCSDCPPVLLCAV*GLRLMI
Trigger: GATCATCAGCCGCAAGCCGCACACGGCACACAGCAG...CACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGGAGCCAGGATCTaGCTGGGTGGCCCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: PTWRETPAVTPTRAGPPCLGARI*LGGPLG
Trigger: TCCTAAGGGGCCACCCAGGCAGATCCTGGCTCCCAG...GCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp ATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGAAGGGCAGGACCTCCCTaGCTGGCACCCCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: MNEWVAASPAQLRVWEPGRAGPP*LAPQSP
Trigger: TGGTGACTGGGGTGCCAGGCAGGGAGGTCCTGCCCT...TCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCGGAGGTGGGAGTGGGTaGCCCGTTTTCCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: GMAGRPTAGLIAYFWENGGGGSG*PVFLRP
Trigger: GGGTCTCAGGAAAACGGGGCACCCACTCCCACCTCC...GCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp ACCCGTGATCGTCCAGAGGGGCTGGGGGTCCAACCCAGACAGGGTCACACAGCACAGGAGGCCTGTGTCTaGTCAGACTGTCCACCCGTG +
Preference number: 4 (lower is better)
Translates to: TRDRPEGLGVQPRQGHTAQEACV*SDCPPV
Trigger: CACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTG...TGCTGTGTGACCCTGTCTGGGTTGGACCCCCAGCCCCTCTGGACGATCACGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGCCACACCTCTGCTGTaGTGTCCCTCACCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: DSVGRSPRGPWWVGRDGSATPLL*CPSPSK
Trigger: TTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGC...GGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTCTCGGTGGCGAAGATaGCGCCCTGGAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GRKCSLHLRPLQGGPTETSRWRR*RPGAGG
Trigger: GCCTCCAGCTCCAGGGCGGCATCTTCGCCACCGAGA...GGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AAGCCACTGCAACCCCTGGTGGGACAAAGACTTAGACGAGGGCCCCAAACAGACCCTCGGGAGCCACGCTaGTTGGCCCTCCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: KPLQPLVGQRLRRGPQTDPREPR*LALPPL
Trigger: GAGGGGAGGGAGGGCCAAGCAGCGTGGCTCCCGAGG...GTCTGTTTGGGGCCCTCGTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619221.4
CDS-3UTR GCA 90 bp TGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGAGCCGGCGCTCCTGTaGCCGCTCCAGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CWEEVLPTSSTSPRRPHREPALL*PLQSCL
Trigger: CAAGCAGCTCTGGAGCGGGCACAGGAGCGCCGGCTC...TCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637182.1
CDS-3UTR CCA 90 bp GAGGGGCTTGGGCTGAGCGGACGTGCAGATGGGTCAGTGGCCACACGGCCTACACCCTCGGAACTCCTCTaGAATGCTCTGTCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: EGLGLSGRADGSVATRPTPSELL*NALSAA
Trigger: TGCCGCAGACAGAGCATTCCAGAGGAGTTCCGAGGG...TGTAGGCCGTGTGGCCACTGACCCATCTGCACGTCCGCTCAGCCCAAGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCGGTCCCCCACGTGGATaGCACCAGTCCTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PTWRETPAVTPTRAGPPCGPPRG*HQSSQP
Trigger: TGGCTGAGAGGACTGGTGCCATCCACGTGGGGGACC...GCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CGGAGTGGGGGAAAGGGTAGAGGGGGAGCAAACCTGATTGCCCTTCTCCCACTCCGAGAAGCGGGCTGCTaGCAGGCCTCCTTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RSGGKGRGGANLIALLPLREAGC*QASFQG
Trigger: GCCCTGAAAGGAGGCCTGCCAGCAGCCCGCTTCTCG...GAGTGGGAGAAGGGCAATCAGGTTTGCTCCCCCTCTACCCTTTCCCCCACTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CGGAGTGGGGGAAAGGGTAGAGGGGGAGCAAACCTGATTGCCCTTCTCCCACTCCCGGGCTGCTGCCTGTaGTGTATAGGACCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RSGGKGRGGANLIALLPLPGCCL*CIGPWA
Trigger: GGCCCAGGGTCCTATACACCACAGGCAGCAGCCCGG...GAGTGGGAGAAGGGCAATCAGGTTTGCTCCCCCTCTACCCTTTCCCCCACTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp ACCTGGGGAACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACCTCTGCCAAGGCCGGTaGCCAGGCCTGCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: TWGTETKHHPRLRVCQTNLCQGR*PGLPSR
Trigger: CCTCGAGGGCAGGCCTGGCCACCGGCCTTGGCAGAG...GTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTTCCCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGGCCCTGACCAGGAGGCCTCCCAAACCCCTATTCTaGAGAAGCGAAGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QGGLGGSAEMVPALTRRPPKPLF*RSEGAG
Trigger: CCCAGCTCCTTCGCTTCTCCAGAATAGGGGTTTGGG...AGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCCAGGCCTCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGTCCCCAAGGGGGCCTTaGTGGGTCGGCAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: PRPLSSRLSSLCQPFLRESPRGP*WVGRDG
Trigger: ACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGA...CTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGAGGCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TTCCCTCGCCTGGAGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTCTCCAGGAGACAGCGTaGGCAGGTCCCCAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: FPRLESWSQCSFPKPRGPLQETA*AGPQGG
Trigger: GCCCCCTTGGGGACCTGCCCACGCTGTCTCCTGGAG...AGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACTCCAGGCGAGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGCTCCTCTCTCCAGGAGACAGCGTaGGCAGGTCCCCAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SLLSAEQPVPTLLKGGSSLQETA*AGPQGG
Trigger: GCCCCCTTGGGGACCTGCCCACGCTGTCTCCTGGAG...AGAGGAGCCTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CGAAGGGCTGGAGGCCTCCACGGTGGGCTGGCCCATCAGGGCGCACAGTGTGGAAGCCACTGCAACCCCTaGTGGGACAAAGACTTAGAC +
Preference number: 4 (lower is better)
Translates to: RRAGGLHGGLAHQGAQCGSHCNP*WDKDLD
Trigger: GTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTGGCT...TCCACACTGTGCGCCCTGATGGGCCAGCCCACCGTGGAGGCCTCCAGCCCTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR CCA 90 bp AGGGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTGCTGGCCAGGAGCTTaGTGGCCTCAAGCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: REAPLGILETQLGERPQLCWPGA*WPQAAS
Trigger: GCTCGCTGCTTGAGGCCACCAAGCTCCTGGCCAGCA...CAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CCCAGGCCTCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGTGCTGGCCAGGAGCTTaGTGGCCTCAAGCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: PRPLSSRLSSLCQPFLRECWPGA*WPQAAS
Trigger: GCTCGCTGCTTGAGGCCACCAAGCTCCTGGCCAGCA...CTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGAGGCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTGAGAGTGTGTCCTGTGGGCATCCTGCAGTaGCCGGGCCGGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SPGVNAVFPSREALRVCPVGILQ*PGRGLW
Trigger: CCACAGCCCCCGGCCCGGCCACTGCAGGATGCCCAC...AGGACACACTCTCAGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTGGCCAGCAGGTGTaGCCCAGGTGGGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGPGQQV*PRWASC
Trigger: GCAGGATGCCCACCTGGGCCACACCTGCTGGCCAGG...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCGATCGGCTTTGGTCCTaGCCAGCAGGTGTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: AHRGPDCILLGEWQRPQPDRLWS*PAGVAQ
Trigger: CTGGGCCACACCTGCTGGCCAGGACCAAAGCCGATC...GGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGGGACCCGGCCCCACCGTGCTaGAGGCTAGCGACAACGAGC +
Preference number: 4 (lower is better)
Translates to: KCSLHLRPLQGGPTETWDPAPPC*RLATTS
Trigger: GCTCGTTGTCGCTAGCCTCCAGCACGGTGGGGCCGG...GTCCCAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGGCCCTGACCAGGAGGCCTAGAGCACGACCTCCGTaGTCTCCGTGTGCACAATCT +
Preference number: 4 (lower is better)
Translates to: QGGLGGSAEMVPALTRRPRARPP*SPCAQS
Trigger: AGATTGTGCACACGGAGACCACGGAGGTCGTGCTCT...AGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCAGGGGCTGGGCTCGTTaGCGGCTCCCAATCATCCTC +
Preference number: 4 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVRGWAR*RLPIIL
Trigger: GAGGATGATTGGGAGCCGCCAACGAGCCCAGCCCCT...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGGCCCTGACCAGGAGGCCTTACAGCTGGGAGATCTaGCAGCAGTCACCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: QGGLGGSAEMVPALTRRPYSWEI*QQSPEP
Trigger: AGGCTCAGGTGACTGCTGCCAGATCTCCCAGCTGTA...AGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCCCAGCCTCCCACGCCTaGAGCCGGCGCTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: AAHSSSMALLGGSAPYIFPASHA*SRRSCA
Trigger: GGCACAGGAGCGCCGGCTCCAGGCGTGGGAGGCTGG...GAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637182.1
CDS-3UTR TCA 90 bp ACTGATCTGGCTGTAAAGAGGAGCGCTACCGCCTCACAGGTCCTGCGTCCATCGCAGGGGTCTCCCGGCTaGGCCCACACAGCATGTTCG +
Preference number: 4 (lower is better)
Translates to: TDLAVKRSATASQVLRPSQGSPG*AHTACS
Trigger: CGAACATGCTGTGTGGGCTCAGCCGGGAGACCCCTG...CGATGGACGCAGGACCTGTGAGGCGGTAGCGCTCCTCTTTACAGCCAGATCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCGGATTCCATCGACACTaGGCAGCCTGTCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVGFHRH*AACRPP
Trigger: AGGTGGGCGACAGGCTGCTCAGTGTCGATGGAATCC...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GCTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGCCGTGCCCGAAATGGTaGTGCCCAGGGGACCCCCGT +
Preference number: 4 (lower is better)
Translates to: AACIQKPHLCCAVPHPQKPCPKW*CPGDPR
Trigger: ACGGGGGTCCCCTGGGCATCACCATTTCGGGCACGG...CTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCCATCACTGGTCTCACTaGGGCTGCCCGACTTGCGGG +
Preference number: 4 (lower is better)
Translates to: GRKCSLHLRPLQGGPTETHHWSH*GCPTCG
Trigger: CCCGCAAGTCGGGCAGCCTCAGTGAGACCAGTGATG...GGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp AGTGGCTCCCCATCAGGAAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAGTGTACGGACGTGGTTaGCCTGCAGGACCCTGTCGA +
Preference number: 4 (lower is better)
Translates to: SGSPSGSQPPSACARIMGVYGRG*PAGPCR
Trigger: TCGACAGGGTCCTGCAGGTCAACCACGTCCGTACAC...TCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTTCCTGATGGGGAGCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp AGGGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGGTTCGGCCCACATGCTaGCTTCAGAGCATCCGGGGA +
Preference number: 4 (lower is better)
Translates to: REAPLGILETQLGERPQLVRPTC*LQSIRG
Trigger: TCCCCGGATGCTCTGAAGTCAGCATGTGGGCCGAAC...CAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp TGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGATGGAGGGGCTTGGGCTaGGCGGACGTGCAGATGGGT +
Preference number: 4 (lower is better)
Translates to: CWEEVLPTSSTSPRRPHRWRGLG*ADVQMG
Trigger: ACCCATCTGCACGTCCGCTCAGCCCAAGCCCCTCCA...TCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCGTGTTCCTGAGACCCCTGTaGGAACTGGGCCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: DGSGPDQEACVCSDCPPVFLRPL*ELGQAK
Trigger: CTTTGCCTGGCCCAGTTCTCACAGGGGTCTCAGGAA...CACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CCAGCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCAAGCCGAGAGGCCCTaGGAGTGTGTCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PAPACSPPVTENSLLLAAQAERP*ECVLSS
Trigger: GCTGGACAGGACACACTCTCAGGGCCTCTCGGCTTG...AGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GGGCTCTTGGCTTTCACTTGGTGCCCTGTGACAGGTAGACAGTGCCCTTTCACTGGCCTCAGTGGCCGCTaGCTCTGGGGCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GLLAFTWCPVTGRQCPFTGLSGR*LWGTGR
Trigger: CCTGCCTGTGCCCCAGAGTCAGCGGCCACTGAGGCC...AGTGAAAGGGCACTGTCTACCTGTCACAGGGCACCAAGTGAAAGCCAAGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACACTTTCACTGCCTCTaGGGGCCTCAGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: EAPLGILETQLGERPQLSHFHCL*GPQWPL
Trigger: CAGCGGCCACTGAGGCCCTCAGAGGCAGTGAAAGTG...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp ATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGAGACTGTCAGGCTCGATaGAGCACACGAGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: MNEWVAASPAQLRVWEPGDCQAR*STRGVG
Trigger: CCCCACCCCTCGTGTGCTTCATCGAGCCTGACAGTC...TCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp CTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTTCGCACCCGGGCCCATaGGCTCTTGGCTCTACTGGC +
Preference number: 4 (lower is better)
Translates to: LPDQQMNEWVAASPAQLRSHPGP*ALGSTG
Trigger: GCCAGTAGAGCCAAGAGCTCATGGGCCCGGGTGCGA...ACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACAGCCGCCACTTGAGTaGCACCGCCAGCATTGTGCC +
Preference number: 4 (lower is better)
Translates to: EAPLGILETQLGERPQLSQPPLE*HRQHCA
Trigger: GGCACAATGCTGGCGGTGTCACTCAAGTGGCGGCTG...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637182.1
CDS-3UTR TCA 90 bp TCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGCTCCTCTCGCCCAGCCGCCACTTaGGTGACACCGCCAGCATTG +
Preference number: 4 (lower is better)
Translates to: SLLSAEQPVPTLLKGGSSRPAAT*VTPPAL
Trigger: CAATGCTGGCGGTGTCACTCAAGTGGCGGCTGGGCG...AGAGGAGCCTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637182.1
CDS-3UTR GCA 90 bp AGGGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGAACGTCGGCCCCTCCTaGGTCCTTGCCTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: REAPLGILETQLGERPQLNVGPS*VLASFG
Trigger: TCCAAAGGAGGCAAGGACGCAGGAGGGGCCGACGTT...CAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCAGCGGGCGGGACTTGTaGCCATCTTCATGGGCACCT +
Preference number: 4 (lower is better)
Translates to: PTWRETPAVTPTRAGPPCSGRDL*PSSWAP
Trigger: AGGTGCCCATGAAGATGGGCACAAGTCCCGCCCGCT...GCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCAGCATGGCTGGCCCCGTaGAGCGGGATTCCATCGACA +
Preference number: 4 (lower is better)
Translates to: EAPLGILETQLGERPQLSAWLAP*SGIPST
Trigger: TGTCGATGGAATCCCGCTGCACGGGGCCAGCCATGC...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGAGAGTGCCTCGTGGCTaGACTGCCGCAGGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: EEVLPTSSTSPRRPHRDLRVPRG*TAAGWP
Trigger: TGGCCACCCTGCGGCAGTGCAGCCACGAGGCACTCT...CAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACGCCTGGCTCCAGGGTaGCCGTCCTGTGTGCCACGC +
Preference number: 4 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPRLAPG*PSCVPR
Trigger: GCGTGGCACACAGGACGGGCACCCTGGAGCCAGGCG...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGACGCCTGGCTCCAGGGTaGCCGTCCTGTGTGCCACGC +
Preference number: 4 (lower is better)
Translates to: LHGFAGRKCSLHLRPLQGRLAPG*PSCVPR
Trigger: GCGTGGCACACAGGACGGGCACCCTGGAGCCAGGCG...TCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCGGCGAGAAGCGGGCTaGTGGCAGGCCTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: QQMNEWVAASPAQLRVWERREAG*WQASFQ
Trigger: CTGAAAGGAGGCCTGCCAGCAGCCCGCTTCTCGCCG...CTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp TGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGACGTGCCCCGGGCTGCTaGCTGTGGTGTATAGGACCC +
Preference number: 4 (lower is better)
Translates to: CWEEVLPTSSTSPRRPHRRAPGC*LWCIGP
Trigger: GGGTCCTATACACCACAGGCAGCAGCCCGGGGCACG...TCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACGTGCCCCGGGCTGCTaGCTGTGGTGTATAGGACCC +
Preference number: 4 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGRAPGC*LWCIGP
Trigger: GGGTCCTATACACCACAGGCAGCAGCCCGGGGCACG...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CAGAGTCTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCGTGCCCCGGGCTGCTaGCTGTGGTGTATAGGACCC +
Preference number: 4 (lower is better)
Translates to: QSLPDQQMNEWVAASPAQRAPGC*LWCIGP
Trigger: GGGTCCTATACACCACAGGCAGCAGCCCGGGGCACG...CTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCAGCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTGGTCGTGCCCCGGGCTaGTGCCTGTGGTGTATAGGA +
Preference number: 4 (lower is better)
Translates to: PAPACSPPVTENSLLLAAGRAPG*CLWCIG
Trigger: TCCTATACACCACAGGCAGCAGCCCGGGGCACGACC...AGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCAGCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTTCGAGGGCCACCCTCTaGACGGTGCCCGTCATGATG +
Preference number: 4 (lower is better)
Translates to: PAPACSPPVTENSLLLAASRATL*TVPVMM
Trigger: CATCATGACGGGCACCGTGCAGAGGGTGGCCCTCGA...AGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp TGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTGCCGGTGGCCAGGCCTaGCCTCGAGGGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: CSSFQLHGFAGRKCSLHLAGGQA*PRGPPS
Trigger: AGAGGGTGGCCCTCGAGGGCAGGCCTGGCCACCGGC...AAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTCGCATGGGGTCCTTGTaGAGGGTCACCTTGTGCATC +
Preference number: 4 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSRMGSL*RVTLCI
Trigger: GATGCACAAGGTGACCCTGCACAAGGACCCCATGCG...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCAGGCCCGGCTGCTGTGTaGCGTGTGCGGCTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPGPAAV*RVRLAA
Trigger: AGCCGCAAGCCGCACACGGCACACAGCAGCCGGGCC...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATGGCCCGGCTGCTGTGTaGCGTGTGCGGCTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHGPAAV*RVRLAA
Trigger: AGCCGCAAGCCGCACACGGCACACAGCAGCCGGGCC...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGGCCCGGCTGCTGTGTaGCGTGTGCGGCTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: AAHSSSMALLGGSAPYIFGPAAV*RVRLAA
Trigger: AGCCGCAAGCCGCACACGGCACACAGCAGCCGGGCC...GAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTGGGAGCCAGGATCTaGCTGGGTGGCCCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: EAPLGILETQLGERPQLSLGARI*LGGPLG
Trigger: TCCTAAGGGGCCACCCAGGCAGATCCTGGCTCCCAG...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp TGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAAGGGCAGGACCTCCCTaGCTGGCACCCCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: CWEEVLPTSSTSPRRPHRRAGPP*LAPQSP
Trigger: TGGTGACTGGGGTGCCAGGCAGGGAGGTCCTGCCCT...TCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGAGGGCAGGACCTCCCTaGCTGGCACCCCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: GILETQLGERPQLSLQLGRAGPP*LAPQSP
Trigger: TGGTGACTGGGGTGCCAGGCAGGGAGGTCCTGCCCT...CCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCACCCCCAAGCGCGTGTaGACGCATCATGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: GMAGRPTAGLIAYFWENGTPKRV*THHGNA
Trigger: GGCATTCCCATGATGCGTGCACACGCGCTTGGGGGT...GCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCGAGGAGTGGGCTGAGCGGACGTaGAGATGGGTCAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RGPDCILLGEWQRPQPEEWAERT*RWVSGH
Trigger: GTGGCCACTGACCCATCTGCACGTCCGCTCAGCCCA...CTCCTCGGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CAGAGTCTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGAGCCCTGGCTACACCTaGCCGCCCACTCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: QSLPDQQMNEWVAASPAQSPGYT*PPTPSQ
Trigger: CTGGGATGGAGTGGGCGGGCAGGTGTAGCCAGGGCT...CTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGACGCCCGGCCCCACCGTaGTGGAGGCTAGCGACAACG +
Preference number: 4 (lower is better)
Translates to: LHGFAGRKCSLHLRPLQGRPAPP*WRLATT
Trigger: CGTTGTCGCTAGCCTCCAGCACGGTGGGGCCGGGCG...TCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGTCCGTGGTCTCCGTGTaGACAATCTGCCCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GILETQLGERPQLSLQLGSVVSV*TICPPG
Trigger: GCCGGGCGGGCAGATTGTGCACACGGAGACCACGGA...CCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCGTGGTCTCCGTGTaGACAATCTGCCCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: APACSPPVTENSLLLAAHSVVSV*TICPPG
Trigger: GCCGGGCGGGCAGATTGTGCACACGGAGACCACGGA...ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GGCGCTCACTGGGGAAAGGTGTCAGGAAATTTCAAGTCGGGGATGAACCATCCCTGCACTGCCGCAGGGTaGCCAGGGCGGTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: GAHWGKVSGNFKSGMNHPCTAAG*PGRWHG
Trigger: GCCATGCCACCGCCCTGGCCACCCTGCGGCAGTGCA...GGGATGGTTCATCCCCGACTTGAAATTTCCTGACACCTTTCCCCAGTGAGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGTGCACTGCCGCAGGGTaGCCAGGGCGGTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: QLIPAPWLCWEEVLPTSSCTAAG*PGRWHG
Trigger: GCCATGCCACCGCCCTGGCCACCCTGCGGCAGTGCA...CGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CCCAGGCCTCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGAAGGTGCCACTGCTTaGGATGACGGACTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: PRPLSSRLSSLCQPFLREEGATA*DDGLRH
Trigger: GTGGCGGAGTCCGTCATCCCAAGCAGTGGCACCTTC...CTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGAGGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGACGCCCCTGCAGGAGGTGGATaGCCTCGCTCAGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: ESPTFRIKGPALPGIPDAPAGGG*PRSAAG
Trigger: GCCGGCCGCTGAGCGAGGCCATCCACCTCCTGCAGG...GGCGTCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAATGCCTCATACCCCAATGCCACCTGCAGGAGGTaGATGGCCTCGCTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: KPTPKRVCTHHGNASYPNATCRR*MASLSG
Trigger: GCCGCTGAGCGAGGCCATCCACCTCCTGCAGGTGGC...ATTGGGGTATGAGGCATTCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGCGAGAAGCGGGCTGCTaGCAGGCCTCCTTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GHLGDPTWRETPAVTPTRREAGC*QASFQG
Trigger: GCCCTGAAAGGAGGCCTGCCAGCAGCCCGCTTCTCG...CCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGACCGGGCTGCTGCCTGTaGTGTATAGGACCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: CWEEVLPTSSTSPRRPHRPGCCL*CIGPWA
Trigger: GGCCCAGGGTCCTATACACCACAGGCAGCAGCCCGG...TCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCCGGGCTGCTGCCTGTaGTGTATAGGACCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GILETQLGERPQLSLQLGPGCCL*CIGPWA
Trigger: GGCCCAGGGTCCTATACACCACAGGCAGCAGCCCGG...CCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGCCTCGGTGGCAGTTCTaGGGCCCCGGGGCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGPRWQF*GPGAVV
Trigger: AACCACTGCCCCGGGGCCCCAGAACTGCCACCGAGG...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR CCA 90 bp CATTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGGGCGGGTGGGCGGGCTaGGGCCTGAGGAGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: HFSPISLPLSPLPPLIWLGGWAG*GLRSLR
Trigger: CCGAAGACTCCTCAGGCCCCAGCCCGCCCACCCGCC...CAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR CCA 90 bp ACCTGGGGAACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACGCCTCCACGGTGGGCTaGCCCATCAGGGCGCACAGT +
Preference number: 4 (lower is better)
Translates to: TWGTETKHHPRLRVCQTNASTVG*PIRAHS
Trigger: ACTGTGCGCCCTGATGGGCCAGCCCACCGTGGAGGC...GTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTTCCCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGGCCTCCACGGTGGGCTaGCCCATCAGGGCGCACAGT +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGASTVG*PIRAHS
Trigger: ACTGTGCGCCCTGATGGGCCAGCCCACCGTGGAGGC...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AGGGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCCCGTGTACGGACGTaGTTGACCTGCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: REAPLGILETQLGERPQLSRVRT*LTCRTL
Trigger: CAGGGTCCTGCAGGTCAACCACGTCCGTACACGGGA...CAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTCTTGGAGACCCAACTTaGCGAGAGACCCCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSLGDPT*RETPAV
Trigger: GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATGAGCGGACGTGCAGATaGGTCAGTGGCCACACGGCC +
Preference number: 4 (lower is better)
Translates to: APACSPPVTENSLLLAAHERTCR*VSGHTA
Trigger: GGCCGTGTGGCCACTGACCCATCTGCACGTCCGCTC...ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGTGGCTCCCCATCAGGAAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGACAGGTTGGAGACAGATaGAGGTGGGAGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SGSPSGSQPPSACARIMGQVGDR*RWEWVP
Trigger: GGGCACCCACTCCCACCTCCATCTGTCTCCAACCTG...TCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTTCCTGATGGGGAGCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CGGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCCAGGGACCCCAGGTTaGAGACAGATGGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: RHGWEAHRGPDCILLGEWPGTPG*RQMEVG
Trigger: TCCCACCTCCATCTGTCTCCAACCTGGGGTCCCTGG...CCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CATACCCCAATGCATGACTGCGCTGGGGTATCCAGCTCCTGCCTGCTCACCTCCATCGTCCAGAGGGGCTaGGGGTCCAACCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: HTPMHDCAGVSSSCLLTSIVQRG*GSNPDR
Trigger: CCTGTCTGGGTTGGACCCCCAGCCCCTCTGGACGAT...GGAGGTGAGCAGGCAGGAGCTGGATACCCCAGCGCAGTCATGCATTGGGGTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCAAGGCCCATAGAGCCTGCCCAATGGGCCCAGAACCACAGTCTCAAGTCCCAGATCGTCCAGAGGGGCTaGGGGTCCAACCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: PRPIEPAQWAQNHSLKSQIVQRG*GSNPDR
Trigger: CCTGTCTGGGTTGGACCCCCAGCCCCTCTGGACGAT...CTGGGACTTGAGACTGTGGTTCTGGGCCCATTGGGCAGGCTCTATGGGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCCATCAGGAAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAATGCCTCACCAAGGGGGCCTTGGTaGGTCGGCAGAGATGGTTCC +
Preference number: 4 (lower is better)
Translates to: PIRKPTPKRVCTHHGNASPRGPW*VGRDGS
Trigger: GGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGG...TGAGGCATTCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTTCCTGATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCAAGGCCCATAGAGCCTGCCCAATGGGCCCAGAACCACAGTCTCAAGTCCCAGCCAAGGGGGCCTTGGTaGGTCGGCAGAGATGGTTCC +
Preference number: 4 (lower is better)
Translates to: PRPIEPAQWAQNHSLKSQPRGPW*VGRDGS
Trigger: GGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGG...CTGGGACTTGAGACTGTGGTTCTGGGCCCATTGGGCAGGCTCTATGGGCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCGTCCACCACGCTGGCTaGCTTGATGCGGTCGATGGT +
Preference number: 4 (lower is better)
Translates to: EEILHMRRPAWLGGPPRAVHHAG*LDAVDG
Trigger: ACCATCGACCGCATCAAGCCAGCCAGCGTGGTGGAC...GGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCTGCCTGGCCTTCTCTGAAATGCTaGCCAGGAGCTTGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: WVAASPAQLRVWEPGSAWPSLKC*PGAWWP
Trigger: AGGCCACCAAGCTCCTGGCCAGCATTTCAGAGAAGG...CCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGGCCCTGACCAGGAGGCCTTTGCAGGAAAAGGCGTaGTTCAAGGTCGGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: QGGLGGSAEMVPALTRRPLQEKA*FKVGEE
Trigger: TTCCTCGCCGACCTTGAACCACGCCTTTTCCTGCAA...AGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTCACGGGGAAGGGTGCTaGGGTTGTTGCAGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSHGEGC*GCCRKR
Trigger: CCTTTTCCTGCAACAACCCCAGCACCCTTCCCCGTG...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GCTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGCCGGCCCCACCGTGCTaGAGGCTAGCGACAACGAGC +
Preference number: 4 (lower is better)
Translates to: AACIQKPHLCCAVPHPQKPAPPC*RLATTS
Trigger: GCTCGTTGTCGCTAGCCTCCAGCACGGTGGGGCCGG...CTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGGGACATGCCGCCCTGGAGCTaGAGGCCAAAGCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KCSLHLRPLQGGPTETWDMPPWS*RPKPLR
Trigger: CCTCAGCGGCTTTGGCCTCCAGCTCCAGGGCGGCAT...GTCCCAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGCTCCTCTATGCCGCCCTGGAGCTaGAGGCCAAAGCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLLSAEQPVPTLLKGGSSMPPWS*RPKPLR
Trigger: CCTCAGCGGCTTTGGCCTCCAGCTCCAGGGCGGCAT...AGAGGAGCCTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGGCGAAGATGCCGCCCTaGAGCTGGAGGCCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: GILETQLGERPQLSLQLGAKMPP*SWRPKP
Trigger: CGGCTTTGGCCTCCAGCTCCAGGGCGGCATCTTCGC...CCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGCGAAGATGCCGCCCTaGAGCTGGAGGCCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: DQQMNEWVAASPAQLRVWAKMPP*SWRPKP
Trigger: CGGCTTTGGCCTCCAGCTCCAGGGCGGCATCTTCGC...CCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCTCCAGCACGACCTTGTaGGCCAGTGCGGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFSSTTL*ASAASR
Trigger: GCGGGACGCCGCACTGGCCCACAAGGTCGTGCTGGA...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp ATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGAAGGGGCTGGGCTCGTTaGCGGCTCCCAATCATCCTC +
Preference number: 4 (lower is better)
Translates to: MNEWVAASPAQLRVWEPGRGWAR*RLPIIL
Trigger: GAGGATGATTGGGAGCCGCCAACGAGCCCAGCCCCT...TCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGGCCCTGACCAGGAGGCCTATGTTGCCCAGGGGCTaGATGATGGAAGCAAATGGC +
Preference number: 4 (lower is better)
Translates to: QGGLGGSAEMVPALTRRPMLPRG*MMEANG
Trigger: GCCATTTGCTTCCATCATCCAGCCCCTGGGCAACAT...AGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAAGTGGGGCCTGGCCCTaGCCTCTGGGTCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: LHGFAGRKCSLHLRPLQGSGAWP*PLGPRP
Trigger: GGGTCTGGGACCCAGAGGCCAGGGCCAGGCCCCACT...TCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCTCAGCTCCACCACAGTaGTCCCTCGGAACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: EEILHMRRPAWLGGPPRASAPPQ*SLGTPL
Trigger: CAGAGGAGTTCCGAGGGATCACTGTGGTGGAGCTGA...GGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CTTCGAGAGCTTCTCCAAACATGCGCCAGAAGCCCTCCTCTCGGGCAGGGCCAGGCTCCACTGTGTAACTaGCGGCACCTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LRELLQTCARSPPLGQGQAPLCN*RHLWSP
Trigger: TGGAGACCACAGGTGCCGTCAGTTACACAGTGGAGC...CTGGCCCTGCCCGAGAGGAGGGCTTCTGGCGCATGTTTGGAGAAGCTCTCGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR TCA 90 bp AGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTGAGAGTGTGTCCTCCGTGCCCGAAATGGTaGTGCCCAGGGGACCCCCGT +
Preference number: 4 (lower is better)
Translates to: SPGVNAVFPSREALRVCPPCPKW*CPGDPR
Trigger: ACGGGGGTCCCCTGGGCATCACCATTTCGGGCACGG...AGGACACACTCTCAGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCAGTTCGGCCCACATGCTaGCTTCAGAGCATCCGGGGA +
Preference number: 4 (lower is better)
Translates to: EAPLGILETQLGERPQLSVRPTC*LQSIRG
Trigger: TCCCCGGATGCTCTGAAGTCAGCATGTGGGCCGAAC...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp CTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTCTCTCTCCTCTCGGCTaGGCAGCCTGTGCCAACCCT +
Preference number: 4 (lower is better)
Translates to: LPDQQMNEWVAASPAQLRLSPLG*AACANP
Trigger: AGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGAG...ACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCGGCCGAGTCTCTAGATaGAGTGGCTCCCCATCAGGA +
Preference number: 4 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVGRVSR*SGSPSG
Trigger: TCCTGATGGGGAGCCACTTCATCTAGAGACTCGGCC...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGTGGAGGGGCTTGGGCTaGGCGGACGTGCAGATGGGT +
Preference number: 4 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRWRGLG*ADVQMG
Trigger: ACCCATCTGCACGTCCGCTCAGCCCAAGCCCCTCCA...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGACTGTCCACCCGTaGTCGTCCAGAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFQTVHP*SSRGAG
Trigger: CCCAGCCCCTCTGGACGATCACGGGTGGACAGTCTG...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp ACTGATCTGGCTGTAAAGAGGAGCGCTACCGCCTCACAGGTCCTGCGTCCATCGAGATGGTTCCGGCCCTaGCCAGGAGGCCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: TDLAVKRSATASQVLRPSRWFRP*PGGLCL
Trigger: CAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCT...CGATGGACGCAGGACCTGTGAGGCGGTAGCGCTCCTCTTTACAGCCAGATCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGCAAGCCGAGAGGCCCTaGGAGTGTGTCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GHLGDPTWRETPAVTPTRQAERP*ECVLSS
Trigger: GCTGGACAGGACACACTCTCAGGGCCTCTCGGCTTG...CCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp AGACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCGTCGATGGTAATGACTaGCTTGTTCCGGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RQRGQVPKGALVGRQRWFVDGND*LVPEGG
Trigger: ACCTCCCTCCGGAACAAGTCAGTCATTACCATCGAC...GAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGGCCTCAGTGGCCGCTaGCTCTGGGGCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SCDRELTPPCSSFQLHGFGLSGR*LWGTGR
Trigger: CCTGCCTGTGCCCCAGAGTCAGCGGCCACTGAGGCC...AAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGTCGCACCCGGGCCCATaGGCTCTTGGCTCTACTGGC +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGSHPGP*ALGSTG
Trigger: GCCAGTAGAGCCAAGAGCTCATGGGCCCGGGTGCGA...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCAACGTCGGCCCCTCCTaGGTCCTTGCCTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: GRKCSLHLRPLQGGPTETNVGPS*VLASFG
Trigger: TCCAAAGGAGGCAAGGACGCAGGAGGGGCCGACGTT...GGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCCAGATCACTCCTGGCTaGAAGTCCCCCAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVQITPG*KSPRSQ
Trigger: CTGAGACCTGGGGGACTTGCAGCCAGGAGTGATCTG...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAAGAGTGCCTCGTGGCTaGACTGCCGCAGGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LGILETQLGERPQLSLQLRVPRG*TAAGWP
Trigger: TGGCCACCCTGCGGCAGTGCAGCCACGAGGCACTCT...TAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCCTCCACCTGAAAGAGTaGCTCGTGGCTGCACTGCCG +
Preference number: 4 (lower is better)
Translates to: GRKCSLHLRPLQGGPTETLHLKE*LVAALP
Trigger: CGGCAGTGCAGCCACGAGGCACTCTTTCAGGTGGAG...GGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp TCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGCTCCTCTCACTGCCGCAGGATTTaGACGGCGTCCTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: SLLSAEQPVPTLLKGGSSHCRRI*TASSMG
Trigger: CCCCATGGAGGACGCCGTGCAAATCCTGCGGCAGTG...AGAGGAGCCTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGGGACACCAGGTCCTCGCACTaGCGCAGGATTTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: KCSLHLRPLQGGPTETWDTRSSH*RRICTA
Trigger: CGCCGTGCAAATCCTGCGGCAGTGCGAGGACCTGGT...GTCCCAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCGTGCCCCGGGCTGCTaGCTGTGGTGTATAGGACCC +
Preference number: 4 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRRAPGC*LWCIGP
Trigger: GGGTCCTATACACCACAGGCAGCAGCCCGGGGCACG...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGATCGAGGGCCACCCTCTaGACGGTGCCCGTCATGATG +
Preference number: 4 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGSRATL*TVPVMM
Trigger: CATCATGACGGGCACCGTGCAGAGGGTGGCCCTCGA...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CAAGCCCCAAACCCCTATTCTGGAGAAGCGAAGGAGCTGGGCTCCCATCCGAAGCGGACGTGGTTGACCTaGAGGACCCTGTCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: QAPNPYSGEAKELGSHPKRTWLT*RTLSKG
Trigger: GCCCTTCGACAGGGTCCTGCAGGTCAACCACGTCCG...CTTCGGATGGGAGCCCAGCTCCTTCGCTTCTCCAGAATAGGGGTTTGGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGGCCCGGCTGCTGTGTaGCGTGTGCGGCTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSGPAAV*RVRLAA
Trigger: AGCCGCAAGCCGCACACGGCACACAGCAGCCGGGCC...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCTGGGAGCCAGGATCTaGCTGGGTGGCCCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: QQMNEWVAASPAQLRVWELGARI*LGGPLG
Trigger: TCCTAAGGGGCCACCCAGGCAGATCCTGGCTCCCAG...CTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCCAGGCCTCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGTATCCAGCTCCTGCCTaGTCACCTCCTGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: PRPLSSRLSSLCQPFLREYPAPA*SPPVTE
Trigger: CTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGGATA...CTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGAGGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGCCCTGGCTACACCTaGCCGCCCACTCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGSPGYT*PPTPSQ
Trigger: CTGGGATGGAGTGGGCGGGCAGGTGTAGCCAGGGCT...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGGGAGGTGGGAGTGGGTaGCCCGTTTTCCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: QQMNEWVAASPAQLRVWEGGGSG*PVFLRP
Trigger: GGGTCTCAGGAAAACGGGGCACCCACTCCCACCTCC...CTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCCTACCCCCAAGCCACTaGAACCCCTGGTGGGACAAA +
Preference number: 4 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVLPPSH*NPWWDK
Trigger: TTTGTCCCACCAGGGGTTGCAGTGGCTTGGGGGTAG...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CATTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGCGCCCGGCCCCACCGTaGTGGAGGCTAGCGACAACG +
Preference number: 4 (lower is better)
Translates to: HFSPISLPLSPLPPLIWLRPAPP*WRLATT
Trigger: CGTTGTCGCTAGCCTCCAGCACGGTGGGGCCGGGCG...CAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GGGCTCTTGGCTTTCACTTGGTGCCCTGTGACAGGTAGACAGTGCCCTTTCACTGACCTTGTGGGCCAGTaGGGCGTCCCGCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GLLAFTWCPVTGRQCPFTDLVGQ*GVPQEL
Trigger: CAGCTCCTGCGGGACGCCGCACTGGCCCACAAGGTC...AGTGAAAGGGCACTGTCTACCTGTCACAGGGCACCAAGTGAAAGCCAAGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CATACCCCAATGCATGACTGCGCTGGGGTATCCAGCTCCTGCCTGCTCACCTCCAGCCTTGGGCTGACCTaGCAGAAGGGCAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: HTPMHDCAGVSSSCLLTSSLGLT*QKGRKR
Trigger: CCGCTTTCTGCCCTTCTGGCAGGTCAGCCCAAGGCT...GGAGGTGAGCAGGCAGGAGCTGGATACCCCAGCGCAGTCATGCATTGGGGTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCGCTCTTGGCCTTAGGTaGTCACCTGCTGCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: AHRGPDCILLGEWQRPQPALGLR*SPAAAF
Trigger: GAAAGCCGCAGCAGGTGAGCACCTAAGGCCAAGAGC...GGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATAGCATTGTGCCCTCCTaGCCTCCGGCAGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: APACSPPVTENSLLLAAHSIVPS*PPAEPC
Trigger: ACAGGGCTCTGCCGGAGGGCAGGAGGGCACAATGCT...ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637182.1
CDS-3UTR CCA 90 bp GAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCGTGATGATCTCATCGTaGCGGAGCCTGGTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: EEILHMRRPAWLGGPPRAVMISS*RSLVRW
Trigger: CCACCTGACCAGGCTCCGCCACGATGAGATCATCAC...GGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCTTGGGCAGCTTCACGTaGAAGGTGCCACTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PTWRETPAVTPTRAGPPCLGSFT*KVPLLG
Trigger: CCCAAGCAGTGGCACCTTCCACGTGAAGCTGCCCAA...GCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACGCACGGCGTCCTCCATaGGGCAGTTGTCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: LLAAHSSSMALLGGSAPYARRPP*GSCPGG
Trigger: TCCGCCTGGACAACTGCCCCATGGAGGACGCCGTGC...GTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGGCCCTGACCAGGAGGCCTTTTCAGGGCATCTGCTaGGTCCTCATCAGCATCACT +
Preference number: 4 (lower is better)
Translates to: QGGLGGSAEMVPALTRRPFQGIC*VLISIT
Trigger: AGTGATGCTGATGAGGACCCAGCAGATGCCCTGAAA...AGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCGAGAAGCGGGCTGCTaGCAGGCCTCCTTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRREAGC*QASFQG
Trigger: GCCCTGAAAGGAGGCCTGCCAGCAGCCCGCTTCTCG...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTCAGCACTGTCCACACTaGGCACAGCCGGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LPDQQMNEWVAASPAQLRQHCPH*AQPARS
Trigger: GCTTCTCGCCGGCTGTGCCCAGTGTGGACAGTGCTG...ACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGCAGCACTGTCCACACTaGGCACAGCCGGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: EEVLPTSSTSPRRPHRDLQHCPH*AQPARS
Trigger: GCTTCTCGCCGGCTGTGCCCAGTGTGGACAGTGCTG...CAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCATGGTGTATAGGACCCTaGGCCCCCAAAGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: EAPLGILETQLGERPQLSWCIGP*APKATL
Trigger: GAGGGTGGCTTTGGGGGCCCAGGGTCCTATACACCA...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCTGCCTGGAAAGCTCTCGTCAGCTaGGGTTGGGGTATAGCTCGT +
Preference number: 4 (lower is better)
Translates to: WVAASPAQLRVWEPGSAWKALVS*GWGIAR
Trigger: ACGAGCTATACCCCAACCCCAGCTGACGAGAGCTTT...CCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTCCTCCTCCTCCTCTaGAAAGCTCTCGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PTWRETPAVTPTRAGPPCLLLLL*KALVSW
Trigger: CCAGCTGACGAGAGCTTTCCAGAGGAGGAGGAGGAG...GCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTCTCTGCCAAGGCCGGTaGCCAGGCCTGCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: SCDRELTPPCSSFQLHGFLCQGR*PGLPSR
Trigger: CCTCGAGGGCAGGCCTGGCCACCGGCCTTGGCAGAG...AAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTGAGAGTGTGTCCTGCCTCCACGGTGGGCTaGCCCATCAGGGCGCACAGT +
Preference number: 4 (lower is better)
Translates to: SPGVNAVFPSREALRVCPASTVG*PIRAHS
Trigger: ACTGTGCGCCCTGATGGGCCAGCCCACCGTGGAGGC...AGGACACACTCTCAGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGAGGGCCAGCACTTCCTaGGATCCCAGACGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: DQQMNEWVAASPAQLRVWRASTS*DPRRPN
Trigger: GTTGGGGCGTCTGGGATCCCAGGAAGTGCTGGCCCT...CCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGAAGGGCCAGCACTTCCTaGGATCCCAGACGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGRASTS*DPRRPN
Trigger: GTTGGGGCGTCTGGGATCCCAGGAAGTGCTGGCCCT...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCCAGGCCTCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGTGCAGATGGGTCAGTaGCCACACGGCCTACAGAAG +
Preference number: 4 (lower is better)
Translates to: PRPLSSRLSSLCQPFLREVQMGQ*PHGLQK
Trigger: CTTCTGTAGGCCGTGTGGCCACTGACCCATCTGCAC...CTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGAGGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACGAGCGGACGTGCAGATaGGTCAGTGGCCACACGGCC +
Preference number: 4 (lower is better)
Translates to: LLAAHSSSMALLGGSAPYERTCR*VSGHTA
Trigger: GGCCGTGTGGCCACTGACCCATCTGCACGTCCGCTC...GTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGTCTCCAGGAGACAGCGTaGGCAGGTCCCCAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LLASRSHTSAVLSLTLKSLQETA*AGPQGG
Trigger: GCCCCCTTGGGGACCTGCCCACGCTGTCTCCTGGAG...ACTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCTGCCTGGAGTGCCCTTTCACTCTaGGCTGAGTACACGGGAATC +
Preference number: 4 (lower is better)
Translates to: WVAASPAQLRVWEPGSAWSALSL*AEYTGI
Trigger: GATTCCCGTGTACTCAGCCCAGAGTGAAAGGGCACT...CCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGCTCCTCTGGGGGAGAGGGCAGGTaGAAGGGGACATGTCACAGG +
Preference number: 4 (lower is better)
Translates to: SLLSAEQPVPTLLKGGSSGGEGR*KGTCHR
Trigger: CCTGTGACATGTCCCCTTCCACCTGCCCTCTCCCCC...AGAGGAGCCTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGGATCGGCTTTGGTCCTaGCCAGCAGGTGTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QQMNEWVAASPAQLRVWEDRLWS*PAGVAQ
Trigger: CTGGGCCACACCTGCTGGCCAGGACCAAAGCCGATC...CTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGATCGGCTTTGGTCCTaGCCAGCAGGTGTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: CWEEVLPTSSTSPRRPHRDRLWS*PAGVAQ
Trigger: CTGGGCCACACCTGCTGGCCAGGACCAAAGCCGATC...TCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp ACCTGGGGAACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACATGCCGCCCTGGAGCTaGAGGCCAAAGCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TWGTETKHHPRLRVCQTNMPPWS*RPKPLR
Trigger: CCTCAGCGGCTTTGGCCTCCAGCTCCAGGGCGGCAT...GTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTTCCCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CAGAGTCTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGAGGACAGGGTCTCGGTaGCGAAGATGCCGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: QSLPDQQMNEWVAASPAQRTGSR*RRCRPG
Trigger: TCCAGGGCGGCATCTTCGCCACCGAGACCCTGTCCT...CTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGGAAGCACACGAGGGGTaGGGAGGACAGGGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: QQMNEWVAASPAQLRVWEEAHEG*GGQGLG
Trigger: ACCGAGACCCTGTCCTCCCCACCCCTCGTGTGCTTC...CTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGGGACCTGCTCACAGAACTGTaGCCTCCCCAGTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KCSLHLRPLQGGPTETWDLLTEL*PPQWGL
Trigger: CAGGCCCCACTGGGGAGGCCACAGTTCTGTGAGCAG...GTCCCAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGACGCCCAGGGGTCTCCCGGCTaGGCCCACACAGCATGTTCG +
Preference number: 4 (lower is better)
Translates to: ESPTFRIKGPALPGIPDAQGSPG*AHTACS
Trigger: CGAACATGCTGTGTGGGCTCAGCCGGGAGACCCCTG...GGCGTCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CATTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGCCGTGCCCGAAATGGTaGTGCCCAGGGGACCCCCGT +
Preference number: 4 (lower is better)
Translates to: HFSPISLPLSPLPPLIWLPCPKW*CPGDPR
Trigger: ACGGGGGTCCCCTGGGCATCACCATTTCGGGCACGG...CAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACGCACGGTGCCCGTCATaGTGGATGCCTCCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: LLAAHSSSMALLGGSAPYARCPS*WMPPVP
Trigger: GGGAACTGGAGGCATCCATCATGACGGGCACCGTGC...GTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGGCACGGTGCCCGTCATaGTGGATGCCTCCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGARCPS*WMPPVP
Trigger: GGGAACTGGAGGCATCCATCATGACGGGCACCGTGC...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCGGCCATCTGAGACGCTaGAACCAAAGTCATGCCGCA +
Preference number: 4 (lower is better)
Translates to: EEILHMRRPAWLGGPPRAGHLRR*NQSHAA
Trigger: TGCGGCATGACTTTGGTTTCAGCGTCTCAGATGGCC...GGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp AGACCTGAGGCTGCCCTCCTGCCACTACCTTCCCAACCTGGGCTAAAGAGACTCGTGTACGGACGTGGTTaGCCTGCAGGACCCTGTCGA +
Preference number: 4 (lower is better)
Translates to: RPEAALLPLPSQPGLKRLVYGRG*PAGPCR
Trigger: TCGACAGGGTCCTGCAGGTCAACCACGTCCGTACAC...GAGTCTCTTTAGCCCAGGTTGGGAAGGTAGTGGCAGGAGGGCAGCCTCAGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGTGTACGGACGTGGTTaGCCTGCAGGACCCTGTCGA +
Preference number: 4 (lower is better)
Translates to: DQQMNEWVAASPAQLRVWVYGRG*PAGPCR
Trigger: TCGACAGGGTCCTGCAGGTCAACCACGTCCGTACAC...CCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp CAGAGTCTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGGTTCGGCCCACATGCTaGCTTCAGAGCATCCGGGGA +
Preference number: 4 (lower is better)
Translates to: QSLPDQQMNEWVAASPAQVRPTC*LQSIRG
Trigger: TCCCCGGATGCTCTGAAGTCAGCATGTGGGCCGAAC...CTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCAGACCAACAGATGAATaGGTGGGTGGCCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVRPTDE*VGGRFS
Trigger: GGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCT...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCTCATACCCCAATGCATaGCTGCGCTGGGGTATCCAG +
Preference number: 4 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVSYPNA*LRWGIQ
Trigger: CTGGATACCCCAGCGCAGTCATGCATTGGGGTATGA...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp ATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGAAAGAAGCAGGAGGGCTaGGAGCCCAAGGCCCATAGA +
Preference number: 4 (lower is better)
Translates to: MNEWVAASPAQLRVWEPGKKQEG*EPKAHR
Trigger: TCTATGGGCCTTGGGCTCTCAGCCCTCCTGCTTCTT...TCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCAAAGAAGCAGGAGGGCTaGGAGCCCAAGGCCCATAGA +
Preference number: 4 (lower is better)
Translates to: EAPLGILETQLGERPQLSKKQEG*EPKAHR
Trigger: TCTATGGGCCTTGGGCTCTCAGCCCTCCTGCTTCTT...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAGATGGTTCCGGCCCTaGCCAGGAGGCCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RELTPPCSSFQLHGFAGRRWFRP*PGGLCL
Trigger: CAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCT...CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGCTCCTCTGGCCCACCGCGGGCCTaGTTGCATACTTTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SLLSAEQPVPTLLKGGSSGPPRA*LHTFGR
Trigger: TCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCC...AGAGGAGCCTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATGGCCCACCGCGGGCCTaGTTGCATACTTTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: APACSPPVTENSLLLAAHGPPRA*LHTFGR
Trigger: TCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCC...ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCACTTTCACTGCCTCTaGGGGCCTCAGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRHFHCL*GPQWPL
Trigger: CAGCGGCCACTGAGGCCCTCAGAGGCAGTGAAAGTG...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCGGTGGCAATGCCATTaGTGGACAGGACACGGTCCC +
Preference number: 4 (lower is better)
Translates to: GILETQLGERPQLSLQLGRWQCH*WTGHGP
Trigger: GGGACCGTGTCCTGTCCATCAATGGCATTGCCACCG...CCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCGTGTGGGTTGTGTTCTGGTaGGGTATTTCCCCCTCAACG +
Preference number: 4 (lower is better)
Translates to: DGSGPDQEACVCSDCPPVWVVFW*GISPST
Trigger: CGTTGAGGGGGAAATACCTCACCAGAACACAACCCA...CACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp ATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGACAGATCACTCCTGGCTaGAAGTCCCCCAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: MNEWVAASPAQLRVWEPGQITPG*KSPRSQ
Trigger: CTGAGACCTGGGGGACTTGCAGCCAGGAGTGATCTG...TCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGAGAGTGCCTCGTGGCTaGACTGCCGCAGGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: QLIPAPWLCWEEVLPTSSRVPRG*TAAGWP
Trigger: TGGCCACCCTGCGGCAGTGCAGCCACGAGGCACTCT...CGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTCTCCACCTGAAAGAGTaGCTCGTGGCTGCACTGCCG +
Preference number: 4 (lower is better)
Translates to: LPDQQMNEWVAASPAQLRLHLKE*LVAALP
Trigger: CGGCAGTGCAGCCACGAGGCACTCTTTCAGGTGGAG...ACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGTGCCCAGCTCCACGCTaGGCTTCTTGGGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QQMNEWVAASPAQLRVWECPAPR*ASWAAS
Trigger: TGAAGCTGCCCAAGAAGCGCAGCGTGGAGCTGGGCA...CTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACCACTGCCGCAGGATTTaGACGGCGTCCTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: LLAAHSSSMALLGGSAPYHCRRI*TASSMG
Trigger: CCCCATGGAGGACGCCGTGCAAATCCTGCGGCAGTG...GTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCACTGCCGCAGGATTTaGACGGCGTCCTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFHCRRI*TASSMG
Trigger: CCCCATGGAGGACGCCGTGCAAATCCTGCGGCAGTG...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCACCAGGTCCTCGCACTaGCGCAGGATTTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFTRSSH*RRICTA
Trigger: CGCCGTGCAAATCCTGCGGCAGTGCGAGGACCTGGT...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGACCAGGTCCTCGCACTaGCGCAGGATTTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGTRSSH*RRICTA
Trigger: CGCCGTGCAAATCCTGCGGCAGTGCGAGGACCTGGT...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTGAGAGTGTGTCCTCGGCGAGAAGCGGGCTaGTGGCAGGCCTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SPGVNAVFPSREALRVCPRREAG*WQASFQ
Trigger: CTGAAAGGAGGCCTGCCAGCAGCCCGCTTCTCGCCG...AGGACACACTCTCAGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGACGGCGAGAAGCGGGCTaGTGGCAGGCCTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LHGFAGRKCSLHLRPLQGRREAG*WQASFQ
Trigger: CTGAAAGGAGGCCTGCCAGCAGCCCGCTTCTCGCCG...TCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGCCGGTGGCCAGGCCTaGCCTCGAGGGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: NRDQASSQAQSLPDQQMNAGGQA*PRGPPS
Trigger: AGAGGGTGGCCCTCGAGGGCAGGCCTGGCCACCGGC...ATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCAGCTCCTCCATTTCTaGAGGAGAGGCTCGTACCTC +
Preference number: 4 (lower is better)
Translates to: PTWRETPAVTPTRAGPPCQLLHF*RRGSYL
Trigger: GAGGTACGAGCCTCTCCTGCAGAAATGGAGGAGCTG...GCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CGGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGTGCAGGGTCACCTTGTaGATCTCCAAGGGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: RHGWEAHRGPDCILLGEWCRVTL*ISKGVG
Trigger: GCCTACACCCTTGGAGATGCACAAGGTGACCCTGCA...CCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CATACCCCAATGCATGACTGCGCTGGGGTATCCAGCTCCTGCCTGCTCACCTCCCGCATGGGGTCCTTGTaGAGGGTCACCTTGTGCATC +
Preference number: 4 (lower is better)
Translates to: HTPMHDCAGVSSSCLLTSRMGSL*RVTLCI
Trigger: GATGCACAAGGTGACCCTGCACAAGGACCCCATGCG...GGAGGTGAGCAGGCAGGAGCTGGATACCCCAGCGCAGTCATGCATTGGGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGCGGACGTGGTTGACCTaGAGGACCCTGTCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGRTWLT*RTLSKG
Trigger: GCCCTTCGACAGGGTCCTGCAGGTCAACCACGTCCG...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGCTGGGAGCCAGGATCTaGCTGGGTGGCCCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGLGARI*LGGPLG
Trigger: TCCTAAGGGGCCACCCAGGCAGATCCTGGCTCCCAG...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATACCCCCAAGCGCGTGTaGACGCATCATGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: APACSPPVTENSLLLAAHTPKRV*THHGNA
Trigger: GGCATTCCCATGATGCGTGCACACGCGCTTGGGGGT...ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CATACCCCAATGCATGACTGCGCTGGGGTATCCAGCTCCTGCCTGCTCACCTCCAAGGCCCATAGAGCCTaGCCAATGGGCCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: HTPMHDCAGVSSSCLLTSKAHRA*PMGPEP
Trigger: TGGTTCTGGGCCCATTGGGCAGGCTCTATGGGCCTT...GGAGGTGAGCAGGCAGGAGCTGGATACCCCAGCGCAGTCATGCATTGGGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGAGCCCTGGCTACACCTaGCCGCCCACTCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: QLIPAPWLCWEEVLPTSSSPGYT*PPTPSQ
Trigger: CTGGGATGGAGTGGGCGGGCAGGTGTAGCCAGGGCT...CGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCGCCACACCTCTGCTGTaGTGTCCCTCACCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: EEILHMRRPAWLGGPPRAATPLL*CPSPSK
Trigger: TTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGC...GGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCGCGAGCAGTGTTCCATaGTGGTGCCATCGATGGACA +
Preference number: 4 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVASSVP*WCHRWT
Trigger: TGTCCATCGATGGCACCAGCATGGAACACTGCTCGC...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AGGGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGATCCACGGGGAAGGGTaGTGGGGTTGTTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: REAPLGILETQLGERPQLIHGEG*WGCCRK
Trigger: TTTCCTGCAACAACCCCAGCACCCTTCCCCGTGGAT...CAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTTCCGTGTGCACAATCTaGCCGCCCGGCCCCACCGTG +
Preference number: 4 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSSVCTI*PPGPTV
Trigger: CACGGTGGGGCCGGGCGGGCAGATTGTGCACACGGA...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp TGTGAGCTAAAGCCCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTCCGTGTGCACAATCTaGCCGCCCGGCCCCACCGTG +
Preference number: 4 (lower is better)
Translates to: CELKPLTLVPLSRYSLVFSVCTI*PPGPTV
Trigger: CACGGTGGGGCCGGGCGGGCAGATTGTGCACACGGA...GAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGGGCTTTAGCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTTCCGTGTGCACAATCTaGCCGCCCGGCCCCACCGTG +
Preference number: 4 (lower is better)
Translates to: CSSFQLHGFAGRKCSLHLSVCTI*PPGPTV
Trigger: CACGGTGGGGCCGGGCGGGCAGATTGTGCACACGGA...AAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCTCCGTGGTCTCCGTGTaGACAATCTGCCCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: AAHSSSMALLGGSAPYIFSVVSV*TICPPG
Trigger: GCCGGGCGGGCAGATTGTGCACACGGAGACCACGGA...GAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGGCCCTGACCAGGAGGCCTCCTCTGGCTTTCTGCTaGGCAGAGAATCAAATTTGC +
Preference number: 4 (lower is better)
Translates to: QGGLGGSAEMVPALTRRPPLAFC*AENQIC
Trigger: GCAAATTTGATTCTCTGCGCAGCAGAAAGCCAGAGG...AGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGAAGCCTTGGGCTGACCTaGCAGAAGGGCAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGSLGLT*QKGRKR
Trigger: CCGCTTTCTGCCCTTCTGGCAGGTCAGCCCAAGGCT...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp ATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGACCCTCGGAACTCCTCTaGAATGCTCTGTCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: MNEWVAASPAQLRVWEPGPSELL*NALSAA
Trigger: TGCCGCAGACAGAGCATTCCAGAGGAGTTCCGAGGG...TCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CGGAGTGGGGGAAAGGGTAGAGGGGGAGCAAACCTGATTGCCCTTCTCCCACTCTCAGCAGATCACTCCTaGCTGCAAGTCCCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: RSGGKGRGGANLIALLPLSADHS*LQVPQV
Trigger: GACCTGGGGGACTTGCAGCCAGGAGTGATCTGCTGA...GAGTGGGAGAAGGGCAATCAGGTTTGCTCCCCCTCTACCCTTTCCCCCACTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGACATCGTGGCGGAGCCTaGTCAGGTGGATCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: CWEEVLPTSSTSPRRPHRHRGGA*SGGSRS
Trigger: TGAACGGGATCCACCTGACCAGGCTCCGCCACGATG...TCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CAAAGAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGAGGGTGGCCAGGGCGGTaGCATGGCTGGCCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: QRITHFQNQRASTSWDPRGWPGR*HGWPRA
Trigger: TGCACGGGGCCAGCCATGCCACCGCCCTGGCCACCC...TCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGGAAGGTGCCACTGCTTaGGATGACGGACTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: QQMNEWVAASPAQLRVWEEGATA*DDGLRH
Trigger: GTGGCGGAGTCCGTCATCCCAAGCAGTGGCACCTTC...CTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGAGAAGGTGCCACTGCTTaGGATGACGGACTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGEGATA*DDGLRH
Trigger: GTGGCGGAGTCCGTCATCCCAAGCAGTGGCACCTTC...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCGTGGGCGGATATTGTCAATaGCCAGTAGCTTGTCGCCTG +
Preference number: 4 (lower is better)
Translates to: DGSGPDQEACVCSDCPPVGGYCQ*PVACRL
Trigger: CAGGCGACAAGCTACTGGCCATTGACAATATCCGCC...CACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CATTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGGCCACCTGCAGGAGGTaGATGGCCTCGCTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: HFSPISLPLSPLPPLIWLATCRR*MASLSG
Trigger: GCCGCTGAGCGAGGCCATCCACCTCCTGCAGGTGGC...CAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCCTCCTCCTCCTCCTCTaGAAAGCTCTCGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GRKCSLHLRPLQGGPTETLLLLL*KALVSW
Trigger: CCAGCTGACGAGAGCTTTCCAGAGGAGGAGGAGGAG...GGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AGGGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGCAAAGTCATGCCGCATaGGGTCCTTGTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: REAPLGILETQLGERPQLQSHAA*GPCAGS
Trigger: TGACCCTGCACAAGGACCCCATGCGGCATGACTTTG...CAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCCGTGTACGGACGTaGTTGACCTGCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: APACSPPVTENSLLLAAHSRVRT*LTCRTL
Trigger: CAGGGTCCTGCAGGTCAACCACGTCCGTACACGGGA...ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCCAACAGATGAATGAGTaGGTGGCCGCTTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVQQMNE*VAASPA
Trigger: GGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTG...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTCAGTCACCACAGACCTaGGGAACAGAGACCAAGCAT +
Preference number: 4 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSQSPQT*GTETKH
Trigger: ATGCTTGGTCTCTGTTCCCCAGGTCTGTGGTGACTG...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCCTCCTCTGGGCATCTTaGAGACCCAACTTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: AHRGPDCILLGEWQRPQPLLWAS*RPNLAR
Trigger: TCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAG...GGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACAGGGCCAGCACTTCCTaGGATCCCAGACGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: LLAAHSSSMALLGGSAPYRASTS*DPRRPN
Trigger: GTTGGGGCGTCTGGGATCCCAGGAAGTGCTGGCCCT...GTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCAGAGCGGACGTGCAGATaGGTCAGTGGCCACACGGCC +
Preference number: 4 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPERTCR*VSGHTA
Trigger: GGCCGTGTGGCCACTGACCCATCTGCACGTCCGCTC...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAATGCCTCATACCCCAATCCACATGGAGGGGCTTaGGCTGAGCGGACGTGCAGA +
Preference number: 4 (lower is better)
Translates to: KPTPKRVCTHHGNASYPNPHGGA*AERTCR
Trigger: TCTGCACGTCCGCTCAGCCCAAGCCCCTCCATGTGG...ATTGGGGTATGAGGCATTCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCAGGAAGAGCACTTTTCTaGCCTCCAGGGACCCCAGGT +
Preference number: 4 (lower is better)
Translates to: EAPLGILETQLGERPQLSGRALF*PPGTPG
Trigger: ACCTGGGGTCCCTGGAGGCCAGAAAAGTGCTCTTCC...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGCCAAGGGGGCCTTGGTaGGTCGGCAGAGATGGTTCC +
Preference number: 4 (lower is better)
Translates to: RELTPPCSSFQLHGFAGRPRGPW*VGRDGS
Trigger: GGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGG...CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGAGATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCGCATCTTCCCTCGCCTaGAGTCCTGGAGTCAATGCA +
Preference number: 4 (lower is better)
Translates to: RDGSGPDQEACVCSDCPPASSLA*SPGVNA
Trigger: TGCATTGACTCCAGGACTCCAGGCGAGGGAAGATGC...GGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGTAATGAGGAGGCCGGCATaGCTGGGAGGCCCACCGCGG +
Preference number: 4 (lower is better)
Translates to: FLSHLPPSFSSSSTDLAVMRRPA*LGGPPR
Trigger: CCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCAT...TACAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGAGATGAGGAGGCCGGCATaGCTGGGAGGCCCACCGCGG +
Preference number: 4 (lower is better)
Translates to: RDQASSQAQSLPDQQMNEMRRPA*LGGPPR
Trigger: CCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCAT...CTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGGGGGGAGAGGGCAGGTaGAAGGGGACATGTCACAGG +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGGGEGR*KGTCHR
Trigger: CCTGTGACATGTCCCCTTCCACCTGCCCTCTCCCCC...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
60% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCCATCAGGAAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAATGCCTCACCCCAGGGCAGACCCTaGCGTCTTGACTATTTCCAC +
Preference number: 4 (lower is better)
Translates to: PIRKPTPKRVCTHHGNASPQGRP*RLDYFH
Trigger: GTGGAAATAGTCAAGACGCCAGGGTCTGCCCTGGGG...TGAGGCATTCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTTCCTGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCCCTTCTCTGAAATGCTaGCCAGGAGCTTGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVPSLKC*PGAWWP
Trigger: AGGCCACCAAGCTCCTGGCCAGCATTTCAGAGAAGG...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTCCTGGCCAGCAGGTGTaGCCCAGGTGGGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: SCDRELTPPCSSFQLHGFPGQQV*PRWASC
Trigger: GCAGGATGCCCACCTGGGCCACACCTGCTGGCCAGG...AAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CCAGCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTGACAAGGATCGGCTTTaGTCCTGGCCAGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: PAPACSPPVTENSLLLAADKDRL*SWPAGV
Trigger: CACACCTGCTGGCCAGGACCAAAGCCGATCCTTGTC...AGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp ATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGAGACAAGGATCGGCTTTaGTCCTGGCCAGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: MNEWVAASPAQLRVWEPGDKDRL*SWPAGV
Trigger: CACACCTGCTGGCCAGGACCAAAGCCGATCCTTGTC...TCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTCCGGCCCCACCGTGCTaGAGGCTAGCGACAACGAGC +
Preference number: 4 (lower is better)
Translates to: SCDRELTPPCSSFQLHGFPAPPC*RLATTS
Trigger: GCTCGTTGTCGCTAGCCTCCAGCACGGTGGGGCCGG...AAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGACAGGGTCTCGGTaGCGAAGATGCCGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGRTGSR*RRCRPG
Trigger: TCCAGGGCGGCATCTTCGCCACCGAGACCCTGTCCT...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGCGTCCCGCAGGAGCTaGTTGGCTTCCTCCATAGTC +
Preference number: 4 (lower is better)
Translates to: CWEEVLPTSSTSPRRPHRASRRS*LASSIV
Trigger: GACTATGGAGGAAGCCAACCAGCTCCTGCGGGACGC...TCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CATACCCCAATGCATGACTGCGCTGGGGTATCCAGCTCCTGCCTGCTCACCTCCTCCTCCAGGTCTCCATaGAGGCTGGCTCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: HTPMHDCAGVSSSCLLTSSSRSP*RLAPVF
Trigger: GAAGACAGGAGCCAGCCTCCATGGAGACCTGGAGGA...GGAGGTGAGCAGGCAGGAGCTGGATACCCCAGCGCAGTCATGCATTGGGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGCCTGCTGCCTCCCTTaGCCTTCCCCCTGCCTACAC +
Preference number: 4 (lower is better)
Translates to: AAHSSSMALLGGSAPYIFACCLP*PSPCLH
Trigger: GTGTAGGCAGGGGGAAGGCCAAGGGAGGCAGCAGGC...GAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCCCTACCCCCATTTTCTaGCTCTTTCTGACAGCCTAT +
Preference number: 4 (lower is better)
Translates to: DSVGRSPRGPWWVGRDGSPTPIF*LFLTAY
Trigger: ATAGGCTGTCAGAAAGAGCCAGAAAATGGGGGTAGG...GGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCCCCCACCCTTTGGGATaGACAAACTCGGGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: GMAGRPTAGLIAYFWENGPHPLG*TNSGVS
Trigger: ACTGACTCCCGAGTTTGTCCATCCCAAAGGGTGGGG...GCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGACCGGTACCCTGGCAGTaGTCAGGGAGAGGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: LHGFAGRKCSLHLRPLQGPVPWQ*SGRGSP
Trigger: TGGCGAGCCTCTCCCTGACCACTGCCAGGGTACCGG...TCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619221.4
CDS-3UTR TCA 90 bp GACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGTCAGCTCCACCACAGTaGTCCCTCGGAACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: DQQMNEWVAASPAQLRVWSAPPQ*SLGTPL
Trigger: CAGAGGAGTTCCGAGGGATCACTGTGGTGGAGCTGA...CCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACATCATACTCCACCTaGAAGAGTGCCTCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVTSYST*KSASWL
Trigger: CAGCCACGAGGCACTCTTTCAGGTGGAGTATGATGT...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp CCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCACATCATACTCCACCTaGAAGAGTGCCTCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PTWRETPAVTPTRAGPPCTSYST*KSASWL
Trigger: CAGCCACGAGGCACTCTTTCAGGTGGAGTATGATGT...GCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp CTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTATGCCACTGCTTGGGATaGCGGACTCCGCCACATCGA +
Preference number: 4 (lower is better)
Translates to: LGILETQLGERPQLSLQLCHCLG*RTPPHR
Trigger: TCGATGTGGCGGAGTCCGTCATCCCAAGCAGTGGCA...TAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GGGCTCTTGGCTTTCACTTGGTGCCCTGTGACAGGTAGACAGTGCCCTTTCACTCATCACTGGTCTCACTaGGGCTGCCCGACTTGCGGG +
Preference number: 4 (lower is better)
Translates to: GLLAFTWCPVTGRQCPFTHHWSH*GCPTCG
Trigger: CCCGCAAGTCGGGCAGCCTCAGTGAGACCAGTGATG...AGTGAAAGGGCACTGTCTACCTGTCACAGGGCACCAAGTGAAAGCCAAGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CCAGCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTTGCCAGACCAACAGATaGATGAGTGGGTGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: PAPACSPPVTENSLLLAACQTNR*MSGWPL
Trigger: AAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCA...AGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp CGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCGAGGAGTGCCAGACCAACAGATaGATGAGTGGGTGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: RGPDCILLGEWQRPQPEECQTNR*MSGWPL
Trigger: AAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCA...CTCCTCGGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATAGATGGTTCCGGCCCTaGCCAGGAGGCCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHRWFRP*PGGLCL
Trigger: CAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCT...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CATACCCCAATGCATGACTGCGCTGGGGTATCCAGCTCCTGCCTGCTCACCTCCTCACTTGGTGCCCTGTaGCAGGTAGACAGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: HTPMHDCAGVSSSCLLTSSLGAL*QVDSAL
Trigger: AAGGGCACTGTCTACCTGTCACAGGGCACCAAGTGA...GGAGGTGAGCAGGCAGGAGCTGGATACCCCAGCGCAGTCATGCATTGGGGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCAGCCGCACCTTCTCTaGAATGCTGGCCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: QQMNEWVAASPAQLRVWEQPHLL*NAGQEL
Trigger: AAGCTCCTGGCCAGCATTTCAGAGAAGGTGCGGCTG...CTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACTGTCAGGCTCGATaGAGCACACGAGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: AAHSSSMALLGGSAPYIFDCQAR*STRGVG
Trigger: CCCCACCCCTCGTGTGCTTCATCGAGCCTGACAGTC...GAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp CTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTACGGTGGCAATGCCATTaGTGGACAGGACACGGTCCC +
Preference number: 4 (lower is better)
Translates to: LGILETQLGERPQLSLQLRWQCH*WTGHGP
Trigger: GGGACCGTGTCCTGTCCATCAATGGCATTGCCACCG...TAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp ACCTGGGGAACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACGAGGGGGAGCAAACCTaGTTGCCCTTCTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: TWGTETKHHPRLRVCQTNEGEQT*LPFSHS
Trigger: GGAGTGGGAGAAGGGCAATCAGGTTTGCTCCCCCTC...GTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTTCCCCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGGGACCAGATCACTCCTGGCTaGAAGTCCCCCAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: KCSLHLRPLQGGPTETWDQITPG*KSPRSQ
Trigger: CTGAGACCTGGGGGACTTGCAGCCAGGAGTGATCTG...GTCCCAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGGCATGGCTGGCCCCGTaGAGCGGGATTCCATCGACA +
Preference number: 4 (lower is better)
Translates to: QLIPAPWLCWEEVLPTSSAWLAP*SGIPST
Trigger: TGTCGATGGAATCCCGCTGCACGGGGCCAGCCATGC...CGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACTGCCCAGCTCCACGCTaGGCTTCTTGGGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LLAAHSSSMALLGGSAPYCPAPR*ASWAAS
Trigger: TGAAGCTGCCCAAGAAGCGCAGCGTGGAGCTGGGCA...GTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AGACCTGAGGCTGCCCTCCTGCCACTACCTTCCCAACCTGGGCTAAAGAGACTCGGTGCCCGTCCTGTGTaGCACGCTGCCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: RPEAALLPLPSQPGLKRLGARPV*HAAFLD
Trigger: ATCAAGAAAGGCAGCGTGGCACACAGGACGGGCACC...GAGTCTCTTTAGCCCAGGTTGGGAAGGTAGTGGCAGGAGGGCAGCCTCAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TTCTGGGAATCTCAGAATCTCAGGACTAGCAAGCCCCAAACCCCTATTCTGGAGCGCCTGGCTCCAGGGTaGCCGTCCTGTGTGCCACGC +
Preference number: 4 (lower is better)
Translates to: FWESQNLRTSKPQTPILERLAPG*PSCVPR
Trigger: GCGTGGCACACAGGACGGGCACCCTGGAGCCAGGCG...CTCCAGAATAGGGGTTTGGGGCTTGCTAGTCCTGAGATTCTGAGATTCCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGGTCGTGCCCCGGGCTaGTGCCTGTGGTGTATAGGA +
Preference number: 4 (lower is better)
Translates to: AAHSSSMALLGGSAPYIFGRAPG*CLWCIG
Trigger: TCCTATACACCACAGGCAGCAGCCCGGGGCACGACC...GAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATGGTCGTGCCCCGGGCTaGTGCCTGTGGTGTATAGGA +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHGRAPG*CLWCIG
Trigger: TCCTATACACCACAGGCAGCAGCCCGGGGCACGACC...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp ATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGAGAGCTTCTCCAAACATaGGCCAGAAGCCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: MNEWVAASPAQLRVWEPGELLQT*ARSPPL
Trigger: GAGAGGAGGGCTTCTGGCGCATGTTTGGAGAAGCTC...TCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGGCCCGTCATGATGGATaGCTCCAGTTCCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: EEVLPTSSTSPRRPHRDLARHDG*LQFPQQ
Trigger: CTGCTGAGGGAACTGGAGGCATCCATCATGACGGGC...CAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATTCGAGGGCCACCCTCTaGACGGTGCCCGTCATGATG +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHSRATL*TVPVMM
Trigger: CATCATGACGGGCACCGTGCAGAGGGTGGCCCTCGA...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGGGGGTATCCAGCTCCTaGCTGCTCACCTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRGVSSS*LLTSCD
Trigger: GTCACAGGAGGTGAGCAGGCAGGAGCTGGATACCCC...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCTGCCTCATACCCCAATaGATGACTGCGCTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: AHRGPDCILLGEWQRPQPCLIPQ*MTALGY
Trigger: ATACCCCAGCGCAGTCATGCATTGGGGTATGAGGCA...GGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCTGCCTCATACCCCAATaGATGACTGCGCTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: PTWRETPAVTPTRAGPPCCLIPQ*MTALGY
Trigger: ATACCCCAGCGCAGTCATGCATTGGGGTATGAGGCA...GCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGGAGGTGGGAGTGGGTaGCCCGTTTTCCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: AAHSSSMALLGGSAPYIFGGGSG*PVFLRP
Trigger: GGGTCTCAGGAAAACGGGGCACCCACTCCCACCTCC...GAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGCAGGAGGCCTGTGTCTaGTCAGACTGTCCACCCGTG +
Preference number: 4 (lower is better)
Translates to: RELTPPCSSFQLHGFAGRQEACV*SDCPPV
Trigger: CACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTG...CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GCTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGCAGGAGGCCTGTGTCTaGTCAGACTGTCCACCCGTG +
Preference number: 4 (lower is better)
Translates to: AACIQKPHLCCAVPHPQKQEACV*SDCPPV
Trigger: CACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTG...CTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AGGGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTTAGTTAGAGTCGGGTaGATCTTCCCTCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: REAPLGILETQLGERPQLLVRVG*IFPRLE
Trigger: CTCCAGGCGAGGGAAGATGCACCCGACTCTAACTAA...CAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCTTAGTTAGAGTCGGGTaGATCTTCCCTCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EEILHMRRPAWLGGPPRALVRVG*IFPRLE
Trigger: CTCCAGGCGAGGGAAGATGCACCCGACTCTAACTAA...GGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp ACCCGTGATCGTCCAGAGGGGCTGGGGGTCCAACCCAGACAGGGTCACACAGCAACCATAAGCGGCCTTTaGAATACAGCCCCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: TRDRPEGLGVQPRQGHTATISGL*NTAPCA
Trigger: AGCACAAGGGGCTGTATTGCAAAGGCCGCTTATGGT...TGCTGTGTGACCCTGTCTGGGTTGGACCCCCAGCCCCTCTGGACGATCACGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCGAGGAGGGGTGCTGGGGTTGTTaGAGGAAAAGGCGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: RGPDCILLGEWQRPQPEEGCWGC*RKRRGS
Trigger: TGAACCACGCCTTTTCCTGCAACAACCCCAGCACCC...CTCCTCGGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCTGCCTGGCCTGCCACCAGAATGTaGAGACATGACCTAAATCTG +
Preference number: 4 (lower is better)
Translates to: WVAASPAQLRVWEPGSAWPATRM*RHDLNL
Trigger: CAGATTTAGGTCATGTCTGCACATTCTGGTGGCAGG...CCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CGGAGTGGGGGAAAGGGTAGAGGGGGAGCAAACCTGATTGCCCTTCTCCCACTCATATGCAGGCACCACTaGCTGCCTCTGGCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: RSGGKGRGGANLIALLPLICRHH*LPLAFC
Trigger: GCAGAAAGCCAGAGGCAGGCAGTGGTGCCTGCATAT...GAGTGGGAGAAGGGCAATCAGGTTTGCTCCCCCTCTACCCTTTCCCCCACTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CCAAGGCCCATAGAGCCTGCCCAATGGGCCCAGAACCACAGTCTCAAGTCCCAGATATGCAGGCACCACTaGCTGCCTCTGGCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PRPIEPAQWAQNHSLKSQICRHH*LPLAFC
Trigger: GCAGAAAGCCAGAGGCAGGCAGTGGTGCCTGCATAT...CTGGGACTTGAGACTGTGGTTCTGGGCCCATTGGGCAGGCTCTATGGGCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGCTGAGGCTGCCCTCCTaGCACTACCTTCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: RELTPPCSSFQLHGFAGRLRLPS*HYLPNL
Trigger: CAGGTTGGGAAGGTAGTGGCAGGAGGGCAGCCTCAG...CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCTGAGGCTGCCCTCCTaGCACTACCTTCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFLRLPS*HYLPNL
Trigger: CAGGTTGGGAAGGTAGTGGCAGGAGGGCAGCCTCAG...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AGAGATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCCAGCCTATGCCTACCTaGCTGCCTCTCTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: RDGSGPDQEACVCSDCPPQPMPT*LPLSMC
Trigger: ACACATAGAGAGAGGCAGGCAGGTAGGCATAGGCTG...GGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGTCCCCCACCGTCAGGTaGAGGCGCTCATTAATACCC +
Preference number: 4 (lower is better)
Translates to: GHLGDPTWRETPAVTPTRSPTVR*RRSLIP
Trigger: GGGTATTAATGAGCGCCTGCACCTGACGGTGGGGGA...CCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CAAGCCCCAAACCCCTATTCTGGAGAAGCGAAGGAGCTGGGCTCCCATCCGAAGGGGAGCAAACCTGATTaGCCTTCTCCCACTCCCCCA +
Preference number: 4 (lower is better)
Translates to: QAPNPYSGEAKELGSHPKGSKPD*PSPTPP
Trigger: TGGGGGAGTGGGAGAAGGGCAATCAGGTTTGCTCCC...CTTCGGATGGGAGCCCAGCTCCTTCGCTTCTCCAGAATAGGGGTTTGGGGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCGCTATTGTCTCCCCTaGTGCCCACCAACTCCCTCG +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFRYCLP*CPPTPS
Trigger: CGAGGGAGTTGGTGGGCAGCAGGGGAGACAATAGCG...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619221.4
CDS-3UTR GCA 90 bp CGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGCGCTCCAGAGCTGCTTaGGCTAACTGGCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: RELTPPCSSFQLHGFAGRRSRAA*ANWHRL
Trigger: CAGCCTGTGCCAGTTAGCGCAAGCAGCTCTGGAGCG...CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637182.1
CDS-3UTR CCA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGATCAGCAGATCACTCCTaGCTGCAAGTCCCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGSADHS*LQVPQV
Trigger: GACCTGGGGGACTTGCAGCCAGGAGTGATCTGCTGA...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCATCGTGGCGGAGCCTaGTCAGGTGGATCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFHRGGA*SGGSRS
Trigger: TGAACGGGATCCACCTGACCAGGCTCCGCCACGATG...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATGTGATGATCTCATCGTaGCGGAGCCTGGTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: APACSPPVTENSLLLAAHVMISS*RSLVRW
Trigger: CCACCTGACCAGGCTCCGCCACGATGAGATCATCAC...ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGGGCGGTGGCATGGCTaGCCCCGTGCAGCGGGATTC +
Preference number: 4 (lower is better)
Translates to: NRDQASSQAQSLPDQQMNGRWHG*PRAAGF
Trigger: GAATCCCGCTGCACGGGGCCAGCCATGCCACCGCCC...ATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGTTGGGCAGCTTCACGTaGAAGGTGCCACTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: QQMNEWVAASPAQLRVWELGSFT*KVPLLG
Trigger: CCCAAGCAGTGGCACCTTCCACGTGAAGCTGCCCAA...CTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCGGCGGATATTGTCAATaGCCAGTAGCTTGTCGCCTG +
Preference number: 4 (lower is better)
Translates to: PTWRETPAVTPTRAGPPCGGYCQ*PVACRL
Trigger: CAGGCGACAAGCTACTGGCCATTGACAATATCCGCC...GCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATGGTCCCCCACGTGGATaGCACCAGTCCTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHGPPRG*HQSSQP
Trigger: TGGCTGAGAGGACTGGTGCCATCCACGTGGGGGACC...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp ATTCTACCTGCTACATGCCCAGCCCTGTACAGCTGGGAGATCTGGCAGCAGTCAGGTCCCCCACGTGGATaGCACCAGTCCTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ILPATCPALYSWEIWQQSGPPRG*HQSSQP
Trigger: TGGCTGAGAGGACTGGTGCCATCCACGTGGGGGACC...TGACTGCTGCCAGATCTCCCAGCTGTACAGGGCTGGGCATGTAGCAGGTAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGATGCGGTCCCCCACGTaGATGGCACCAGTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: RELTPPCSSFQLHGFAGRMRSPT*MAPVLS
Trigger: TGAGAGGACTGGTGCCATCCACGTGGGGGACCGCAT...CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGACAGCACTGTCCACACTaGGCACAGCCGGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LHGFAGRKCSLHLRPLQGQHCPH*AQPARS
Trigger: GCTTCTCGCCGGCTGTGCCCAGTGTGGACAGTGCTG...TCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAAAGCCACCCTCGGTaGCCGAGCTGTCCCAAGACT +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFQSHPR*PSCPKT
Trigger: AGTCTTGGGACAGCTCGGCCACCGAGGGTGGCTTTG...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGCAAAGCCACCCTCGGTaGCCGAGCTGTCCCAAGACT +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGQSHPR*PSCPKT
Trigger: AGTCTTGGGACAGCTCGGCCACCGAGGGTGGCTTTG...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCTGGTGTATAGGACCCTaGGCCCCCAAAGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFWCIGP*APKATL
Trigger: GAGGGTGGCTTTGGGGGCCCAGGGTCCTATACACCA...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CTTCGAGAGCTTCTCCAAACATGCGCCAGAAGCCCTCCTCTCGGGCAGGGCCAGAAAGCTCTCGTCAGCTaGGGTTGGGGTATAGCTCGT +
Preference number: 4 (lower is better)
Translates to: LRELLQTCARSPPLGQGQKALVS*GWGIAR
Trigger: ACGAGCTATACCCCAACCCCAGCTGACGAGAGCTTT...CTGGCCCTGCCCGAGAGGAGGGCTTCTGGCGCATGTTTGGAGAAGCTCTCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR CCA 90 bp AGTGGCTCCCCATCAGGAAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAAAAGCTCTCGTCAGCTaGGGTTGGGGTATAGCTCGT +
Preference number: 4 (lower is better)
Translates to: SGSPSGSQPPSACARIMGKALVS*GWGIAR
Trigger: ACGAGCTATACCCCAACCCCAGCTGACGAGAGCTTT...TCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTTCCTGATGGGGAGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGGGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGAAAGCTCTCGTCAGCTaGGGTTGGGGTATAGCTCGT +
Preference number: 4 (lower is better)
Translates to: REAPLGILETQLGERPQLKALVS*GWGIAR
Trigger: ACGAGCTATACCCCAACCCCAGCTGACGAGAGCTTT...CAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CAGAGTCTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTCCTCCTCCTCCTCTaGAAAGCTCTCGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QSLPDQQMNEWVAASPAQLLLLL*KALVSW
Trigger: CCAGCTGACGAGAGCTTTCCAGAGGAGGAGGAGGAG...CTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGGGACCTCCTCCTCCTCCTCTaGAAAGCTCTCGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KCSLHLRPLQGGPTETWDLLLLL*KALVSW
Trigger: CCAGCTGACGAGAGCTTTCCAGAGGAGGAGGAGGAG...GTCCCAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CCAAGGCCCATAGAGCCTGCCCAATGGGCCCAGAACCACAGTCTCAAGTCCCAGGCTCCATGGCTTTGCTaGGAGGAAGTGCTCCCTACA +
Preference number: 4 (lower is better)
Translates to: PRPIEPAQWAQNHSLKSQAPWLC*EEVLPT
Trigger: TGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGC...CTGGGACTTGAGACTGTGGTTCTGGGCCCATTGGGCAGGCTCTATGGGCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCAGCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTGCTCCATGGCTTTGCTaGGAGGAAGTGCTCCCTACA +
Preference number: 4 (lower is better)
Translates to: PAPACSPPVTENSLLLAAAPWLC*EEVLPT
Trigger: TGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGC...AGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGGAGAAGCGAAGGAGCTaGGCTCCCATCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: RELTPPCSSFQLHGFAGREKRRS*APIRSS
Trigger: GCTGCTTCGGATGGGAGCCCAGCTCCTTCGCTTCTC...CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGGAGAAGCGAAGGAGCTaGGCTCCCATCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGEKRRS*APIRSS
Trigger: GCTGCTTCGGATGGGAGCCCAGCTCCTTCGCTTCTC...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGGACCCCTGTGAGAACTaGGCCAGGCAAAGCACATCC +
Preference number: 4 (lower is better)
Translates to: EEVLPTSSTSPRRPHRDLDPCEN*ARQSTS
Trigger: GGATGTGCTTTGCCTGGCCCAGTTCTCACAGGGGTC...CAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGGACCCCTGTGAGAACTaGGCCAGGCAAAGCACATCC +
Preference number: 4 (lower is better)
Translates to: GILETQLGERPQLSLQLGDPCEN*ARQSTS
Trigger: GGATGTGCTTTGCCTGGCCCAGTTCTCACAGGGGTC...CCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGACCCCTGTGAGAACTaGGCCAGGCAAAGCACATCC +
Preference number: 4 (lower is better)
Translates to: GHLGDPTWRETPAVTPTRDPCEN*ARQSTS
Trigger: GGATGTGCTTTGCCTGGCCCAGTTCTCACAGGGGTC...CCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GCTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGCAGGTTGGAGACAGATaGAGGTGGGAGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: AACIQKPHLCCAVPHPQKQVGDR*RWEWVP
Trigger: GGGCACCCACTCCCACCTCCATCTGTCTCCAACCTG...CTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCCAGGGACCCCAGGTTaGAGACAGATGGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFPGTPG*RQMEVG
Trigger: TCCCACCTCCATCTGTCTCCAACCTGGGGTCCCTGG...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTACCAGGGACCCCAGGTTaGAGACAGATGGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LGILETQLGERPQLSLQLPGTPG*RQMEVG
Trigger: TCCCACCTCCATCTGTCTCCAACCTGGGGTCCCTGG...TAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CAGAGTCTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGGGAAGAGCACTTTTCTaGCCTCCAGGGACCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QSLPDQQMNEWVAASPAQGRALF*PPGTPG
Trigger: ACCTGGGGTCCCTGGAGGCCAGAAAAGTGCTCTTCC...CTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGCGCTCACTGGGGAAAGGTGTCAGGAAATTTCAAGTCGGGGATGAACCATCCCTCCCCAAGGGGGCCTTaGTGGGTCGGCAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: GAHWGKVSGNFKSGMNHPSPRGP*WVGRDG
Trigger: ACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGA...GGGATGGTTCATCCCCGACTTGAAATTTCCTGACACCTTTCCCCAGTGAGCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGCGCTCACTGGGGAAAGGTGTCAGGAAATTTCAAGTCGGGGATGAACCATCCCCAGAGCCCAGCGAAGTaGAGGGGAGGGGTAAGGGAG +
Preference number: 4 (lower is better)
Translates to: GAHWGKVSGNFKSGMNHPQSPAK*RGGVRE
Trigger: CTCCCTTACCCCTCCCCTCCACTTCGCTGGGCTCTG...GGGATGGTTCATCCCCGACTTGAAATTTCCTGACACCTTTCCCCAGTGAGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGAGATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCAGTGCCCTTTCACTCTaGGCTGAGTACACGGGAATC +
Preference number: 4 (lower is better)
Translates to: RDGSGPDQEACVCSDCPPSALSL*AEYTGI
Trigger: GATTCCCGTGTACTCAGCCCAGAGTGAAAGGGCACT...GGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCCACTGCAACCCCTGGTaGGACAAAGACTTAGACGAG +
Preference number: 4 (lower is better)
Translates to: EEILHMRRPAWLGGPPRAHCNPW*DKDLDE
Trigger: CTCGTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTG...GGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATCCACCGTGTCAGGGGTaGCCACATCATACTCCACCT +
Preference number: 4 (lower is better)
Translates to: APACSPPVTENSLLLAAHPPCQG*PHHTPP
Trigger: AGGTGGAGTATGATGTGGCCACCCCTGACACGGTGG...ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TTCCCTCGCCTGGAGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTCCCCAGGGCAGACCCTaGCGTCTTGACTATTTCCAC +
Preference number: 4 (lower is better)
Translates to: FPRLESWSQCSFPKPRGPPQGRP*RLDYFH
Trigger: GTGGAAATAGTCAAGACGCCAGGGTCTGCCCTGGGG...AGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACTCCAGGCGAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCGTCCACCACGCTGGCTaGCTTGATGCGGTCGATGGT +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFVHHAG*LDAVDG
Trigger: ACCATCGACCGCATCAAGCCAGCCAGCGTGGTGGAC...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGTGGCCAGGAGCTTGGTaGCCTCAAGCAGCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGWPGAW*PQAASS
Trigger: ACTGCTCGCTGCTTGAGGCCACCAAGCTCCTGGCCA...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CAAGCCCCAAACCCCTATTCTGGAGAAGCGAAGGAGCTGGGCTCCCATCCGAAGGGTCTCCATGGAGGCTaGCTCCTGTCTTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: QAPNPYSGEAKELGSHPKGLHGG*LLSSGL
Trigger: GAGACCTGAAGACAGGAGCCAGCCTCCATGGAGACC...CTTCGGATGGGAGCCCAGCTCCTTCGCTTCTCCAGAATAGGGGTTTGGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTGCTCACAGAACTGTaGCCTCCCCAGTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHLLTEL*PPQWGL
Trigger: CAGGCCCCACTGGGGAGGCCACAGTTCTGTGAGCAG...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCAGCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCAACAGGTCCATGTTTaGGGCAGCCTTCCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: PAPACSPPVTENSLLLAAQQVHV*GSLPAN
Trigger: GTTGGCAGGAAGGCTGCCCCAAACATGGACCTGTTG...AGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCAAGGCCCATAGAGCCTGCCCAATGGGCCCAGAACCACAGTCTCAAGTCCCAGGTCCATGAAAGAACCTaGATTCGCACCCGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: PRPIEPAQWAQNHSLKSQVHERT*IRTRAH
Trigger: ATGGGCCCGGGTGCGAATCCAGGTTCTTTCATGGAC...CTGGGACTTGAGACTGTGGTTCTGGGCCCATTGGGCAGGCTCTATGGGCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCCTTGTCGGTGCCACCTaGGATAGTCAGGCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: AAHSSSMALLGGSAPYIFLVGAT*DSQAQR
Trigger: ACGCTGGGCCTGACTATCTCAGGTGGCACCGACAAG...GAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATGGATTCCATCGACACTaGGCAGCCTGTCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHGFHRH*AACRPP
Trigger: AGGTGGGCGACAGGCTGCTCAGTGTCGATGGAATCC...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp CGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGGCTCCACTGTGTAACTaGCGGCACCTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RELTPPCSSFQLHGFAGRAPLCN*RHLWSP
Trigger: TGGAGACCACAGGTGCCGTCAGTTACACAGTGGAGC...CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp ATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGAACGCTTGGTGAGGCCTaGGATGACAATGGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: MNEWVAASPAQLRVWEPGTLGEA*DDNGVK
Trigger: TTTGACCCCATTGTCATCTCAGGCCTCACCAAGCGT...TCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp TGTGAGCTAAAGCCCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCCATCACTGGTCTCACTaGGGCTGCCCGACTTGCGGG +
Preference number: 4 (lower is better)
Translates to: CELKPLTLVPLSRYSLVFHHWSH*GCPTCG
Trigger: CCCGCAAGTCGGGCAGCCTCAGTGAGACCAGTGATG...GAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGGGCTTTAGCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCAGTTCGGCCCACATGCTaGCTTCAGAGCATCCGGGGA +
Preference number: 4 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPVRPTC*LQSIRG
Trigger: TCCCCGGATGCTCTGAAGTCAGCATGTGGGCCGAAC...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGCTCCTCTTGCCAGACCAACAGATaGATGAGTGGGTGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: SLLSAEQPVPTLLKGGSSCQTNR*MSGWPL
Trigger: AAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCA...AGAGGAGCCTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp TCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTCTCTCTCCTCTCGGCTaGGCAGCCTGTGCCAACCCT +
Preference number: 4 (lower is better)
Translates to: SCDRELTPPCSSFQLHGFLSPLG*AACANP
Trigger: AGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGAG...AAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTAAAGAACAGACCTCTTaGCTCCTCATCTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSKEQTS*LLICSL
Trigger: GAGGGAACAGATGAGGAGTCAAGAGGTCTGTTCTTT...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CCAGCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCCTTTCACTCTGGGCTaGGTACACGGGAATCCAAGA +
Preference number: 4 (lower is better)
Translates to: PAPACSPPVTENSLLLAAPFTLG*VHGNPR
Trigger: TCTTGGATTCCCGTGTACTCAGCCCAGAGTGAAAGG...AGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp AGAGATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCAAGAAATATTGCATATaGGGAGGCCGGCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: RDGSGPDQEACVCSDCPPKKYCI*GGRHGW
Trigger: CCAGCCATGCCGGCCTCCTCATATGCAATATTTCTT...GGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CCAGCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCAGACCCTGGCGTCTTaGCTATTTCCACCATCAAGG +
Preference number: 4 (lower is better)
Translates to: PAPACSPPVTENSLLLAAQTLAS*LFPPSR
Trigger: CCTTGATGGTGGAAATAGTCAAGACGCCAGGGTCTG...AGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCAGTCGATGGTAATGACTaGCTTGTTCCGGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: EAPLGILETQLGERPQLSVDGND*LVPEGG
Trigger: ACCTCCCTCCGGAACAAGTCAGTCATTACCATCGAC...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCCGCACCTTCTCTaGAATGCTGGCCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFQPHLL*NAGQEL
Trigger: AAGCTCCTGGCCAGCATTTCAGAGAAGGTGCGGCTG...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp AGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTGAGAGTGTGTCCTCGGTGGCAATGCCATTaGTGGACAGGACACGGTCCC +
Preference number: 4 (lower is better)
Translates to: SPGVNAVFPSREALRVCPRWQCH*WTGHGP
Trigger: GGGACCGTGTCCTGTCCATCAATGGCATTGCCACCG...AGGACACACTCTCAGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TTCCCTCGCCTGGAGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTTGCCCAGGGGCTGGATaGTGGAAGCAAATGGCAAAC +
Preference number: 4 (lower is better)
Translates to: FPRLESWSQCSFPKPRGPCPGAG*WKQMAN
Trigger: GTTTGCCATTTGCTTCCATCATCCAGCCCCTGGGCA...AGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACTCCAGGCGAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CCAAGGCCCATAGAGCCTGCCCAATGGGCCCAGAACCACAGTCTCAAGTCCCAGCCCCTCCTAATATTGTaGGCTAAAGCCCCTCACCCT +
Preference number: 4 (lower is better)
Translates to: PRPIEPAQWAQNHSLKSQPLLIL*AKAPHP
Trigger: AGGGTGAGGGGCTTTAGCTCACAATATTAGGAGGGG...CTGGGACTTGAGACTGTGGTTCTGGGCCCATTGGGCAGGCTCTATGGGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCAAACTCGGGAGTCAGTTaGGCCCTTTGCCCAACTAAC +
Preference number: 4 (lower is better)
Translates to: EAPLGILETQLGERPQLSNSGVS*ALCPTN
Trigger: GTTAGTTGGGCAAAGGGCTCAACTGACTCCCGAGTT...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp ATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCAAGGCCACCAGGATaGTTGGAGGTGATGCTCTTG +
Preference number: 4 (lower is better)
Translates to: MNEWVAASPAQLRVWEPGSRPPG*LEVMLL
Trigger: CAAGAGCATCACCTCCAATCATCCTGGTGGCCTTGA...TCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AAGCCACTGCAACCCCTGGTGGGACAAAGACTTAGACGAGGGCCCCAAACAGACCTGGAATGCTCTGTCTaGGGCACGCCAGGGAAACGT +
Preference number: 4 (lower is better)
Translates to: KPLQPLVGQRLRRGPQTDLECSV*GTPGKR
Trigger: ACGTTTCCCTGGCGTGCCGCAGACAGAGCATTCCAG...GTCTGTTTGGGGCCCTCGTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGAACTCCTCTGGAATaGTCTGTCTGCGGCACGCCA +
Preference number: 4 (lower is better)
Translates to: LGILETQLGERPQLSLQLGTPLE*SVCGTP
Trigger: TGGCGTGCCGCAGACAGAGCATTCCAGAGGAGTTCC...TAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGGGAACTCCTCTGGAATaGTCTGTCTGCGGCACGCCA +
Preference number: 4 (lower is better)
Translates to: RELTPPCSSFQLHGFAGRGTPLE*SVCGTP
Trigger: TGGCGTGCCGCAGACAGAGCATTCCAGAGGAGTTCC...CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp TGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTGCATGGCTGGCCCCGTaGAGCGGGATTCCATCGACA +
Preference number: 4 (lower is better)
Translates to: CSSFQLHGFAGRKCSLHLAWLAP*SGIPST
Trigger: TGTCGATGGAATCCCGCTGCACGGGGCCAGCCATGC...AAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGTGCCCAGCTCCACGCTaGGCTTCTTGGGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QLIPAPWLCWEEVLPTSSCPAPR*ASWAAS
Trigger: TGAAGCTGCCCAAGAAGCGCAGCGTGGAGCTGGGCA...CGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGTCTCTCCAGCCACCTaGAGGAGGTGGATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSVSPAT*RRWMAS
Trigger: CGAGGCCATCCACCTCCTGCAGGTGGCTGGAGAGAC...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCATCCTTTCAGGGCATCTaGTGGGTCCTCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: EAPLGILETQLGERPQLSSFQGI*WVLISI
Trigger: GATGCTGATGAGGACCCAGCAGATGCCCTGAAAGGA...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCCATCAGGAAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAATGCCTCATCCTTTCAGGGCATCTaGTGGGTCCTCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: PIRKPTPKRVCTHHGNASSFQGI*WVLISI
Trigger: GATGCTGATGAGGACCCAGCAGATGCCCTGAAAGGA...TGAGGCATTCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTTCCTGATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TTCCCTCGCCTGGAGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTCAGCTCCTCCATTTCTaGAGGAGAGGCTCGTACCTC +
Preference number: 4 (lower is better)
Translates to: FPRLESWSQCSFPKPRGPQLLHF*RRGSYL
Trigger: GAGGTACGAGCCTCTCCTGCAGAAATGGAGGAGCTG...AGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACTCCAGGCGAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGGGACTGCAGGGTCACCTTGTaGATCTCCAAGGGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: KCSLHLRPLQGGPTETWDCRVTL*ISKGVG
Trigger: GCCTACACCCTTGGAGATGCACAAGGTGACCCTGCA...GTCCCAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGATGCAGGGTCACCTTGTaGATCTCCAAGGGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGCRVTL*ISKGVG
Trigger: GCCTACACCCTTGGAGATGCACAAGGTGACCCTGCA...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp ACCTGGGGAACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACCGCATGGGGTCCTTGTaGAGGGTCACCTTGTGCATC +
Preference number: 4 (lower is better)
Translates to: TWGTETKHHPRLRVCQTNRMGSL*RVTLCI
Trigger: GATGCACAAGGTGACCCTGCACAAGGACCCCATGCG...GTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTTCCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AGGTCTCCATGGAGGCTGGCTCCTGTCTTCAGGTCTCATTGCAAATGTCGCCTCCTGCTGTGTGCCGTGTaGGGCTTGCGGCTGATGATC +
Preference number: 4 (lower is better)
Translates to: RSPWRLAPVFRSHCKCRLLLCAV*GLRLMI
Trigger: GATCATCAGCCGCAAGCCGCACACGGCACACAGCAG...GAGGCGACATTTGCAATGAGACCTGAAGACAGGAGCCAGCCTCCATGGAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGTATCCAGCTCCTGCCTaGTCACCTCCTGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: RELTPPCSSFQLHGFAGRYPAPA*SPPVTE
Trigger: CTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGGATA...CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGTATCCAGCTCCTGCCTaGTCACCTCCTGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRYPAPA*SPPVTE
Trigger: CTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGGATA...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCCACGCATCATGGGAATaGCTCATACCCCAATGCATG +
Preference number: 4 (lower is better)
Translates to: GMAGRPTAGLIAYFWENGHASWE*LIPQCM
Trigger: CATGCATTGGGGTATGAGGCATTCCCATGATGCGTG...GCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTTGGGCTGAGCGGACGTaGAGATGGGTCAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSWAERT*RWVSGH
Trigger: GTGGCCACTGACCCATCTGCACGTCCGCTCAGCCCA...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CGGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGTCACACAGCTATGGCTaGTTGCATCCAGAAGCCACA +
Preference number: 4 (lower is better)
Translates to: RHGWEAHRGPDCILLGEWSHSYG*LHPEAT
Trigger: TGTGGCTTCTGGATGCAAGCAGCCATAGCTGTGTGA...CCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CGGAGTGGGGGAAAGGGTAGAGGGGGAGCAAACCTGATTGCCCTTCTCCCACTCTTAGTTAGAGTCGGGTaGATCTTCCCTCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RSGGKGRGGANLIALLPLLVRVG*IFPRLE
Trigger: CTCCAGGCGAGGGAAGATGCACCCGACTCTAACTAA...GAGTGGGAGAAGGGCAATCAGGTTTGCTCCCCCTCTACCCTTTCCCCCACTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCGAGGAGCACCGCGGGCCTGATTaGATACTTTTGGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: RGPDCILLGEWQRPQPEEHRGPD*ILLGEW
Trigger: CCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTG...CTCCTCGGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CCAAGGCCCATAGAGCCTGCCCAATGGGCCCAGAACCACAGTCTCAAGTCCCAGCACCGCGGGCCTGATTaGATACTTTTGGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: PRPIEPAQWAQNHSLKSQHRGPD*ILLGEW
Trigger: CCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTG...CTGGGACTTGAGACTGTGGTTCTGGGCCCATTGGGCAGGCTCTATGGGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AGGGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGACCATAAGCGGCCTTTaGAATACAGCCCCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: REAPLGILETQLGERPQLTISGL*NTAPCA
Trigger: AGCACAAGGGGCTGTATTGCAAAGGCCGCTTATGGT...CAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GCTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGCTACCCCCAAGCCACTaGAACCCCTGGTGGGACAAA +
Preference number: 4 (lower is better)
Translates to: AACIQKPHLCCAVPHPQKLPPSH*NPWWDK
Trigger: TTTGTCCCACCAGGGGTTGCAGTGGCTTGGGGGTAG...CTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AGACCTGAGGCTGCCCTCCTGCCACTACCTTCCCAACCTGGGCTAAAGAGACTCGCGAGCAGTGTTCCATaGTGGTGCCATCGATGGACA +
Preference number: 4 (lower is better)
Translates to: RPEAALLPLPSQPGLKRLASSVP*WCHRWT
Trigger: TGTCCATCGATGGCACCAGCATGGAACACTGCTCGC...GAGTCTCTTTAGCCCAGGTTGGGAAGGTAGTGGCAGGAGGGCAGCCTCAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATGCACCTTCTCTGAAATaGTGGCCAGGAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: APACSPPVTENSLLLAAHAPSLK*WPGAWW
Trigger: CCACCAAGCTCCTGGCCAGCATTTCAGAGAAGGTGC...ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGCACCTTCTCTGAAATaGTGGCCAGGAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LPDQQMNEWVAASPAQLRAPSLK*WPGAWW
Trigger: CCACCAAGCTCCTGGCCAGCATTTCAGAGAAGGTGC...ACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGTCCCAGCGGTGCAGCTaGTCACTCCTCTGCACTTTC +
Preference number: 4 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRSQRCS*SLLCTF
Trigger: GAAAGTGCAGAGGAGTGAGCAGCTGCACCGCTGGGA...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTGTTCCCTTCTTCGCTaGCTCCTCCGCCCCATTGTA +
Preference number: 4 (lower is better)
Translates to: APACSPPVTENSLLLAAHCSLLR*LLRPIV
Trigger: TACAATGGGGCGGAGGAGGCAGCGAAGAAGGGAACA...ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAATGCCTCATACCCCAATGGGAGCAAACCTGATTaGCCTTCTCCCACTCCCCCA +
Preference number: 4 (lower is better)
Translates to: KPTPKRVCTHHGNASYPNGSKPD*PSPTPP
Trigger: TGGGGGAGTGGGAGAAGGGCAATCAGGTTTGCTCCC...ATTGGGGTATGAGGCATTCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTATCAGCAGATCACTCCTaGCTGCAAGTCCCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LGILETQLGERPQLSLQLSADHS*LQVPQV
Trigger: GACCTGGGGGACTTGCAGCCAGGAGTGATCTGCTGA...TAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp ACCTGGGGAACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACTTGGGCAGCTTCACGTaGAAGGTGCCACTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: TWGTETKHHPRLRVCQTNLGSFT*KVPLLG
Trigger: CCCAAGCAGTGGCACCTTCCACGTGAAGCTGCCCAA...GTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTTCCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATATGCGGTCCCCCACGTaGATGGCACCAGTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHMRSPT*MAPVLS
Trigger: TGAGAGGACTGGTGCCATCCACGTGGGGGACCGCAT...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGTCAAAGCCACCCTCGGTaGCCGAGCTGTCCCAAGACT +
Preference number: 4 (lower is better)
Translates to: LLASRSHTSAVLSLTLKSQSHPR*PSCPKT
Trigger: AGTCTTGGGACAGCTCGGCCACCGAGGGTGGCTTTG...ACTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGCTCGTCAGCTGGGGTTaGGGTATAGCTCGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: QLIPAPWLCWEEVLPTSSLVSWG*GIARPP
Trigger: CGGAGGACGAGCTATACCCCAACCCCAGCTGACGAG...CGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGGCAGATGAGACGGGGTaGAGAGCGGTGACACAGGAT +
Preference number: 4 (lower is better)
Translates to: RELTPPCSSFQLHGFAGRADETG*RAVTQD
Trigger: ATCCTGTGTCACCGCTCTCCACCCCGTCTCATCTGC...CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR CCA 90 bp GGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGCAAAGTCATGCCGCATaGGGTCCTTGTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GHLGDPTWRETPAVTPTRQSHAA*GPCAGS
Trigger: TGACCCTGCACAAGGACCCCATGCGGCATGACTTTG...CCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCAAAGTCATGCCGCATaGGGTCCTTGTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: QQMNEWVAASPAQLRVWEQSHAA*GPCAGS
Trigger: TGACCCTGCACAAGGACCCCATGCGGCATGACTTTG...CTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CAGAGTCTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCAACAGATGAATGAGTaGGTGGCCGCTTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QSLPDQQMNEWVAASPAQQQMNE*VAASPA
Trigger: GGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTG...CTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TTCCCTCGCCTGGAGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTCAACAGATGAATGAGTaGGTGGCCGCTTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: FPRLESWSQCSFPKPRGPQQMNE*VAASPA
Trigger: GGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTG...AGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACTCCAGGCGAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCTTGGAGACCCAACTTaGCGAGAGACCCCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRLGDPT*RETPAV
Trigger: GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGACTCCTCTGGGCATCTTaGAGACCCAACTTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: CWEEVLPTSSTSPRRPHRLLWAS*RPNLAR
Trigger: TCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAG...TCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCGAGGAGCGTGTGCACGCATCATaGGAATGCCTCATACCCCAA +
Preference number: 4 (lower is better)
Translates to: RGPDCILLGEWQRPQPEERVHAS*ECLIPQ
Trigger: TTGGGGTATGAGGCATTCCCATGATGCGTGCACACG...CTCCTCGGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGATAGAGCCTGCCCAATaGGCCCAGAACCACAGTCTC +
Preference number: 4 (lower is better)
Translates to: GHLGDPTWRETPAVTPTRIEPAQ*AQNHSL
Trigger: GAGACTGTGGTTCTGGGCCCATTGGGCAGGCTCTAT...CCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CGAAGGGCTGGAGGCCTCCACGGTGGGCTGGCCCATCAGGGCGCACAGTGTGGAGATTTTAAGGGATGCTaGTGCTTCCAGATTTCAAGT +
Preference number: 4 (lower is better)
Translates to: RRAGGLHGGLAHQGAQCGDFKGC*CFQISS
Trigger: ACTTGAAATCTGGAAGCACCAGCATCCCTTAAAATC...TCCACACTGTGCGCCCTGATGGGCCAGCCCACCGTGGAGGCCTCCAGCCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR CCA 90 bp ACCTGGGGAACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGGAGGTGGGAGTaGGTGCCCCGTTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: TWGTETKHHPRLRVCQTNRWRWE*VPRFPE
Trigger: CTCAGGAAAACGGGGCACCCACTCCCACCTCCATCT...GTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTTCCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CATTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGTCCCCAAGGGGGCCTTaGTGGGTCGGCAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: HFSPISLPLSPLPPLIWLSPRGP*WVGRDG
Trigger: ACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGA...CAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTCAGAGCCCAGCGAAGTaGAGGGGAGGGGTAAGGGAG +
Preference number: 4 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSQSPAK*RGGVRE
Trigger: CTCCCTTACCCCTCCCCTCCACTTCGCTGGGCTCTG...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCATCAGGAAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAATGCCTCATCCTCGCCTGGAGTCCTaGAGTCAATGCAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: PSGSQPPSACARIMGMPHPRLES*SQCSFP
Trigger: GGGAAAACTGCATTGACTCCAGGACTCCAGGCGAGG...ATGAGGCATTCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTTCCTGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CAAGCCCCAAACCCCTATTCTGGAGAAGCGAAGGAGCTGGGCTCCCATCCGAAGGCATCTTCCCTCGCCTaGAGTCCTGGAGTCAATGCA +
Preference number: 4 (lower is better)
Translates to: QAPNPYSGEAKELGSHPKASSLA*SPGVNA
Trigger: TGCATTGACTCCAGGACTCCAGGCGAGGGAAGATGC...CTTCGGATGGGAGCCCAGCTCCTTCGCTTCTCCAGAATAGGGGTTTGGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCAAATTACGTAACCTCTCTATGAGGAGGCCGGCATaGCTGGGAGGCCCACCGCGG +
Preference number: 4 (lower is better)
Translates to: LVPSLTTCVDLGKLRNLSMRRPA*LGGPPR
Trigger: CCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCAT...AGAGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGATCCCAGACGCCCCAACTTAAGAGTCTCATAAGTGGGGACCAGATTCTGGGAGGGGGAGAGGGCAGGTaGAAGGGGACATGTCACAGG +
Preference number: 4 (lower is better)
Translates to: GSQTPQLKSLISGDQILGGGEGR*KGTCHR
Trigger: CCTGTGACATGTCCCCTTCCACCTGCCCTCTCCCCC...TCCCAGAATCTGGTCCCCACTTATGAGACTCTTAAGTTGGGGCGTCTGGGATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCAAGGCCCATAGAGCCTGCCCAATGGGCCCAGAACCACAGTCTCAAGTCCCAGCACTGCAACCCCTGGTaGGACAAAGACTTAGACGAG +
Preference number: 4 (lower is better)
Translates to: PRPIEPAQWAQNHSLKSQHCNPW*DKDLDE
Trigger: CTCGTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTG...CTGGGACTTGAGACTGTGGTTCTGGGCCCATTGGGCAGGCTCTATGGGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCCACCGTGTCAGGGGTaGCCACATCATACTCCACCT +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFPPCQG*PHHTPP
Trigger: AGGTGGAGTATGATGTGGCCACCCCTGACACGGTGG...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTACCCCAGGGCAGACCCTaGCGTCTTGACTATTTCCAC +
Preference number: 4 (lower is better)
Translates to: LGILETQLGERPQLSLQLPQGRP*RLDYFH
Trigger: GTGGAAATAGTCAAGACGCCAGGGTCTGCCCTGGGG...TAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GCTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGGACAAGGATCGGCTTTaGTCCTGGCCAGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: AACIQKPHLCCAVPHPQKDKDRL*SWPAGV
Trigger: CACACCTGCTGGCCAGGACCAAAGCCGATCCTTGTC...CTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCAGCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTTTGCAGGAAAAGGCGTaGTTCAAGGTCGGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: PAPACSPPVTENSLLLAALQEKA*FKVGEE
Trigger: TTCCTCGCCGACCTTGAACCACGCCTTTTCCTGCAA...AGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp ACCTGGGGAACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACCACGGGGAAGGGTGCTaGGGTTGTTGCAGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: TWGTETKHHPRLRVCQTNHGEGC*GCCRKR
Trigger: CCTTTTCCTGCAACAACCCCAGCACCCTTCCCCGTG...GTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTTCCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCAGCGTCCCGCAGGAGCTaGTTGGCTTCCTCCATAGTC +
Preference number: 4 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPASRRS*LASSIV
Trigger: GACTATGGAGGAAGCCAACCAGCTCCTGCGGGACGC...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTGAGAGTGTGTCCTGCCCTAGACACTCTCTaGACACTCCAGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPGVNAVFPSREALRVCPALDTL*TLQGSS
Trigger: GCTGCTGCCCTGGAGTGTCCAGAGAGTGTCTAGGGC...AGGACACACTCTCAGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGCAACAGGTCCATGTTTaGGGCAGCCTTCCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: GHLGDPTWRETPAVTPTRQQVHV*GSLPAN
Trigger: GTTGGCAGGAAGGCTGCCCCAAACATGGACCTGTTG...CCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCAGGGAGGGGTCAATTTaGCCACCGGTACCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AAHSSSMALLGGSAPYIFREGSI*PPVPWQ
Trigger: CTGCCAGGGTACCGGTGGCCAAATTGACCCCTCCCT...GAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619221.4
CDS-3UTR CCA 90 bp GGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGCGTCCTTGCCTCCTTTaGAGTAGGGCCCATCGTCTT +
Preference number: 4 (lower is better)
Translates to: GHLGDPTWRETPAVTPTRRPCLL*SRAHRL
Trigger: AAGACGATGGGCCCTACTCCAAAGGAGGCAAGGACG...CCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637182.1
3UTR CAA 72 bp TGCCAACCCTTCTTAAGGGAGGCTCCTCTGGGCATCTaGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: CQPFLREAPLGI*ETQLGERPQLS
Trigger: TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCTTAAGAAGGGTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp TTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGTACATCACTGGTCTCACTaGGGCTGCCCGACTTGCGGG +
Preference number: 4 (lower is better)
Translates to: FLSHLPPSFSSSSTDLAVHHWSH*GCPTCG
Trigger: CCCGCAAGTCGGGCAGCCTCAGTGAGACCAGTGATG...TACAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGGGCCATCTGAGACGCTaGAACCAAAGTCATGCCGCA +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGGHLRR*NQSHAA
Trigger: TGCGGCATGACTTTGGTTTCAGCGTCTCAGATGGCC...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGAGACCAACAGATGAATaGGTGGGTGGCCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRRPTDE*VGGRFS
Trigger: GGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCT...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGACGCCAAGAAGCAGGAGGGCTaGGAGCCCAAGGCCCATAGA +
Preference number: 4 (lower is better)
Translates to: ESPTFRIKGPALPGIPDAKKQEG*EPKAHR
Trigger: TCTATGGGCCTTGGGCTCTCAGCCCTCCTGCTTCTT...GGCGTCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGTCACTGGATGGCAGGTaGATGGAAGCTCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGSLDGR*MEAPGS
Trigger: AGACCCTGGAGCTTCCATTCACCTGCCATCCAGTGA...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCTGCCTGGACACCCTTCTCAAAATaGAGAGGGTCTCTGATTTGT +
Preference number: 4 (lower is better)
Translates to: WVAASPAQLRVWEPGSAWTPFSK*RGSLIC
Trigger: ACAAATCAGAGACCCTCTTCATTTTGAGAAGGGTGT...CCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGCCTTTCACTCTGGGCTaGGTACACGGGAATCCAAGA +
Preference number: 4 (lower is better)
Translates to: DQQMNEWVAASPAQLRVWPFTLG*VHGNPR
Trigger: TCTTGGATTCCCGTGTACTCAGCCCAGAGTGAAAGG...CCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp AGACCTGAGGCTGCCCTCCTGCCACTACCTTCCCAACCTGGGCTAAAGAGACTCCCTTTCACTCTGGGCTaGGTACACGGGAATCCAAGA +
Preference number: 4 (lower is better)
Translates to: RPEAALLPLPSQPGLKRLPFTLG*VHGNPR
Trigger: TCTTGGATTCCCGTGTACTCAGCCCAGAGTGAAAGG...GAGTCTCTTTAGCCCAGGTTGGGAAGGTAGTGGCAGGAGGGCAGCCTCAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGCCTCACCCTCAAAAGTaGGGGCTCTTGGCTTTCACT +
Preference number: 4 (lower is better)
Translates to: DQQMNEWVAASPAQLRVWPHPQK*GLLAFT
Trigger: AGTGAAAGCCAAGAGCCCTCACTTTTGAGGGTGAGG...CCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGCTCCTCTCAGACCCTGGCGTCTTaGCTATTTCCACCATCAAGG +
Preference number: 4 (lower is better)
Translates to: SLLSAEQPVPTLLKGGSSQTLAS*LFPPSR
Trigger: CCTTGATGGTGGAAATAGTCAAGACGCCAGGGTCTG...AGAGGAGCCTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp CGGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGGACCCATACAGAAGCTaGCTCTTGCCAATCCATGAT +
Preference number: 4 (lower is better)
Translates to: RHGWEAHRGPDCILLGEWDPYRS*LLPIHD
Trigger: ATCATGGATTGGCAAGAGTCAGCTTCTGTATGGGTC...CCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp AAGCCACTGCAACCCCTGGTGGGACAAAGACTTAGACGAGGGCCCCAAACAGACTGCCCAGGGGCTGGATaGTGGAAGCAAATGGCAAAC +
Preference number: 4 (lower is better)
Translates to: KPLQPLVGQRLRRGPQTDCPGAG*WKQMAN
Trigger: GTTTGCCATTTGCTTCCATCATCCAGCCCCTGGGCA...GTCTGTTTGGGGCCCTCGTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCCAAAGCCAAAGCTATTaGCCTCCTTGTAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVQSQSY*PPCRGR
Trigger: TCTCCCTCTACAAGGAGGGCAATAGCTTTGGCTTTG...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCAAAGCCAAAGCTATTaGCCTCCTTGTAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PTWRETPAVTPTRAGPPCQSQSY*PPCRGR
Trigger: TCTCCCTCTACAAGGAGGGCAATAGCTTTGGCTTTG...GCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp TGTGAGCTAAAGCCCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCAGCGGGCGGGACTTGTaGCCATCTTCATGGGCACCT +
Preference number: 4 (lower is better)
Translates to: CELKPLTLVPLSRYSLVFSGRDL*PSSWAP
Trigger: AGGTGCCCATGAAGATGGGCACAAGTCCCGCCCGCT...GAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGGGCTTTAGCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTCTCCACCTGAAAGAGTaGCTCGTGGCTGCACTGCCG +
Preference number: 4 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSLHLKE*LVAALP
Trigger: CGGCAGTGCAGCCACGAGGCACTCTTTCAGGTGGAG...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp ATTCTACCTGCTACATGCCCAGCCCTGTACAGCTGGGAGATCTGGCAGCAGTCAGGTGCCCGTCCTGTGTaGCACGCTGCCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: ILPATCPALYSWEIWQQSGARPV*HAAFLD
Trigger: ATCAAGAAAGGCAGCGTGGCACACAGGACGGGCACC...TGACTGCTGCCAGATCTCCCAGCTGTACAGGGCTGGGCATGTAGCAGGTAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGAGGTCTCTCCAGCCACCTaGAGGAGGTGGATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RDQASSQAQSLPDQQMNEVSPAT*RRWMAS
Trigger: CGAGGCCATCCACCTCCTGCAGGTGGCTGGAGAGAC...CTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGACGCCGCCCGTCATGATGGATaGCTCCAGTTCCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ESPTFRIKGPALPGIPDAARHDG*LQFPQQ
Trigger: CTGCTGAGGGAACTGGAGGCATCCATCATGACGGGC...GGCGTCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCAGCTCCTCCATTTCTaGAGGAGAGGCTCGTACCTC +
Preference number: 4 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRQLLHF*RRGSYL
Trigger: GAGGTACGAGCCTCTCCTGCAGAAATGGAGGAGCTG...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTATGCAGGGTCACCTTGTaGATCTCCAAGGGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: LGILETQLGERPQLSLQLCRVTL*ISKGVG
Trigger: GCCTACACCCTTGGAGATGCACAAGGTGACCCTGCA...TAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTCTGCTGTGTGCCGTGTaGGGCTTGCGGCTGATGATC +
Preference number: 4 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSLLCAV*GLRLMI
Trigger: GATCATCAGCCGCAAGCCGCACACGGCACACAGCAG...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCCGGCTGAGCAGCCTGTaGCAACCCTTCTTAAGGGAG +
Preference number: 4 (lower is better)
Translates to: AAHSSSMALLGGSAPYIFRLSSL*QPFLRE
Trigger: CTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCG...GAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AGGTCTCCATGGAGGCTGGCTCCTGTCTTCAGGTCTCATTGCAAATGTCGCCTCTATCCAGCTCCTGCCTaGTCACCTCCTGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: RSPWRLAPVFRSHCKCRLYPAPA*SPPVTE
Trigger: CTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGGATA...GAGGCGACATTTGCAATGAGACCTGAAGACAGGAGCCAGCCTCCATGGAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTGGGGTATCCAGCTCCTaGCTGCTCACCTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: CSSFQLHGFAGRKCSLHLGVSSS*LLTSCD
Trigger: GTCACAGGAGGTGAGCAGGCAGGAGCTGGATACCCC...AAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GGATCCCAGACGCCCCAACTTAAGAGTCTCATAAGTGGGGACCAGATTCTGGGAACCCCCAAGCGCGTGTaGACGCATCATGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: GSQTPQLKSLISGDQILGTPKRV*THHGNA
Trigger: GGCATTCCCATGATGCGTGCACACGCGCTTGGGGGT...TCCCAGAATCTGGTCCCCACTTATGAGACTCTTAAGTTGGGGCGTCTGGGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGATGCCCCAGGCACAAGCATaGAGGGCCCTCAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SPWSLYPVTPLFSLLHLMPQAQA*RALREG
Trigger: GCCCTCCCTGAGGGCCCTGCATGCTTGTGCCTGGGG...CATCAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AAGCCACTGCAACCCCTGGTGGGACAAAGACTTAGACGAGGGCCCCAAACAGACGCCACACCTCTGCTGTaGTGTCCCTCACCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: KPLQPLVGQRLRRGPQTDATPLL*CPSPSK
Trigger: TTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGC...GTCTGTTTGGGGCCCTCGTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATACAGCTATGGCTGCTTaGATCCAGAAGCCACACCTC +
Preference number: 4 (lower is better)
Translates to: APACSPPVTENSLLLAAHTAMAA*IQKPHL
Trigger: GAGGTGTGGCTTCTGGATGCAAGCAGCCATAGCTGT...ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCAGAGTCCTGGAGTCAATaGAGTTTTCCCAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: EAPLGILETQLGERPQLSESWSQ*SFPKPR
Trigger: TCTCGGCTTGGGAAAACTGCATTGACTCCAGGACTC...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGCAATACAGCCCCTTGTaGTTCCCGAGAGCCCTAAGA +
Preference number: 4 (lower is better)
Translates to: DQQMNEWVAASPAQLRVWQYSPL*FPRALR
Trigger: TCTTAGGGCTCTCGGGAAGCACAAGGGGCTGTATTG...CCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGGGGTGCTGGGGTTGTTaGAGGAAAAGGCGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRGCWGC*RKRRGS
Trigger: TGAACCACGCCTTTTCCTGCAACAACCCCAGCACCC...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCCACGGGGAAGGGTaGTGGGGTTGTTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LLAAHSSSMALLGGSAPYIHGEG*WGCCRK
Trigger: TTTCCTGCAACAACCCCAGCACCCTTCCCCGTGGAT...GTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCTGTTCCCTTCTTCGCTaGCTCCTCCGCCCCATTGTA +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFCSLLR*LLRPIV
Trigger: TACAATGGGGCGGAGGAGGCAGCGAAGAAGGGAACA...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCCAGGCCTCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGCAGAGAATCAAATTTaGTCCCCCTACCCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: PRPLSSRLSSLCQPFLREAENQI*SPYPSL
Trigger: AAGGCTTGGGTAGGGGGAGCAAATTTGATTCTCTGC...CTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGAGGCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGAGGCGGATATTGTCAATaGCCAGTAGCTTGTCGCCTG +
Preference number: 4 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGGGYCQ*PVACRL
Trigger: CAGGCGACAAGCTACTGGCCATTGACAATATCCGCC...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TTCTGGGAATCTCAGAATCTCAGGACTAGCAAGCCCCAAACCCCTATTCTGGAGGCACGGCGTCCTCCATaGGGCAGTTGTCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: FWESQNLRTSKPQTPILEARRPP*GSCPGG
Trigger: TCCGCCTGGACAACTGCCCCATGGAGGACGCCGTGC...CTCCAGAATAGGGGTTTGGGGCTTGCTAGTCCTGAGATTCTGAGATTCCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGATCCCAGACGCCCCAACTTAAGAGTCTCATAAGTGGGGACCAGATTCTGGGAATGCGGTCCCCCACGTaGATGGCACCAGTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: GSQTPQLKSLISGDQILGMRSPT*MAPVLS
Trigger: TGAGAGGACTGGTGCCATCCACGTGGGGGACCGCAT...TCCCAGAATCTGGTCCCCACTTATGAGACTCTTAAGTTGGGGCGTCTGGGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTATGCGGTCCCCCACGTaGATGGCACCAGTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSMRSPT*MAPVLS
Trigger: TGAGAGGACTGGTGCCATCCACGTGGGGGACCGCAT...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp ACTTCTTTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTGCCACCTGCAGGAGGTaGATGGCCTCGCTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: TSLNKHFGHPPLGKSVPSATCRR*MASLSG
Trigger: GCCGCTGAGCGAGGCCATCCACCTCCTGCAGGTGGC...AGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAAAGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp ATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATTTCAGGGCATCTGCTaGGTCCTCATCAGCATCACT +
Preference number: 4 (lower is better)
Translates to: MNEWVAASPAQLRVWEPGFQGIC*VLISIT
Trigger: AGTGATGCTGATGAGGACCCAGCAGATGCCCTGAAA...TCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTTGGTGTATAGGACCCTaGGCCCCCAAAGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSWCIGP*APKATL
Trigger: GAGGGTGGCTTTGGGGGCCCAGGGTCCTATACACCA...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCAGGACTGTCGGTaGCCAGTTAGAACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: AAHSSSMALLGGSAPYIFDQDCR*PVRTGA
Trigger: TGCCCCTGTTCTAACTGGCCACCGACAGTCCTGGTC...GAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR CCA 90 bp ACCTGGGGAACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACCAAAGTCATGCCGCATaGGGTCCTTGTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: TWGTETKHHPRLRVCQTNQSHAA*GPCAGS
Trigger: TGACCCTGCACAAGGACCCCATGCGGCATGACTTTG...GTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTTCCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGCTCCTCTCAGTCACCACAGACCTaGGGAACAGAGACCAAGCAT +
Preference number: 4 (lower is better)
Translates to: SLLSAEQPVPTLLKGGSSQSPQT*GTETKH
Trigger: ATGCTTGGTCTCTGTTCCCCAGGTCTGTGGTGACTG...AGAGGAGCCTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTGAGAGTGTGTCCTCTTGGAGACCCAACTTaGCGAGAGACCCCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SPGVNAVFPSREALRVCPLGDPT*RETPAV
Trigger: GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG...AGGACACACTCTCAGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGCTCCATGGCTTTGCTaGGAGGAAGTGCTCCCTACA +
Preference number: 4 (lower is better)
Translates to: LGILETQLGERPQLSLQLAPWLC*EEVLPT
Trigger: TGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGC...TAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGCTCATTCCAGCTCCATaGCTTTGCTGGGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: GHLGDPTWRETPAVTPTRLIPAP*LCWEEV
Trigger: CACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAG...CCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AAGCCACTGCAACCCCTGGTGGGACAAAGACTTAGACGAGGGCCCCAAACAGACATAGAGCCTGCCCAATaGGCCCAGAACCACAGTCTC +
Preference number: 4 (lower is better)
Translates to: KPLQPLVGQRLRRGPQTDIEPAQ*AQNHSL
Trigger: GAGACTGTGGTTCTGGGCCCATTGGGCAGGCTCTAT...GTCTGTTTGGGGCCCTCGTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CAGAGTCTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGTTGGACACCCTCCACTaGGCAAGAGTGTCCCATCTT +
Preference number: 4 (lower is better)
Translates to: QSLPDQQMNEWVAASPAQLDTLH*ARVSHL
Trigger: AAGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAA...CTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp ATTCTACCTGCTACATGCCCAGCCCTGTACAGCTGGGAGATCTGGCAGCAGTCAGGAGACAGATGGAGGTaGGAGTGGGTGCCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: ILPATCPALYSWEIWQQSGDRWR*EWVPRF
Trigger: AAAACGGGGCACCCACTCCCACCTCCATCTGTCTCC...TGACTGCTGCCAGATCTCCCAGCTGTACAGGGCTGGGCATGTAGCAGGTAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCAGGAAGAGCACTTTTCTaGCCTCCAGGGACCCCAGGT +
Preference number: 4 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPGRALF*PPGTPG
Trigger: ACCTGGGGTCCCTGGAGGCCAGAAAAGTGCTCTTCC...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGGCATCTTCCCTCGCCTaGAGTCCTGGAGTCAATGCA +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGASSLA*SPGVNA
Trigger: TGCATTGACTCCAGGACTCCAGGCGAGGGAAGATGC...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAATACTTTTGGGAGAATaGCAGAGGCCTCAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: CWEEVLPTSSTSPRRPHRILLGE*QRPQPE
Trigger: CTCGGGCTGAGGCCTCTGCCATTCTCCCAAAAGTAT...TCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGAGCCACTGCAACCCCTaGTGGGACAAAGACTTAGAC +
Preference number: 4 (lower is better)
Translates to: EEVLPTSSTSPRRPHRDLSHCNP*WDKDLD
Trigger: GTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTGGCT...CAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCAGCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTTTGTGCCCATCTTCATaGGCACCTCCTCTAAGGACA +
Preference number: 4 (lower is better)
Translates to: PAPACSPPVTENSLLLAALCPSS*APPLRT
Trigger: TGTCCTTAGAGGAGGTGCCCATGAAGATGGGCACAA...AGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTTGTGCCCATCTTCATaGGCACCTCCTCTAAGGACA +
Preference number: 4 (lower is better)
Translates to: GRKCSLHLRPLQGGPTETLCPSS*APPLRT
Trigger: TGTCCTTAGAGGAGGTGCCCATGAAGATGGGCACAA...GGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCCCACCGTGTCAGGGGTaGCCACATCATACTCCACCT +
Preference number: 4 (lower is better)
Translates to: AAHSSSMALLGGSAPYIFPPCQG*PHHTPP
Trigger: AGGTGGAGTATGATGTGGCCACCCCTGACACGGTGG...GAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GGATCCCAGACGCCCCAACTTAAGAGTCTCATAAGTGGGGACCAGATTCTGGGAGTCCACCACGCTGGCTaGCTTGATGCGGTCGATGGT +
Preference number: 4 (lower is better)
Translates to: GSQTPQLKSLISGDQILGVHHAG*LDAVDG
Trigger: ACCATCGACCGCATCAAGCCAGCCAGCGTGGTGGAC...TCCCAGAATCTGGTCCCCACTTATGAGACTCTTAAGTTGGGGCGTCTGGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCGTCCCGCAGGAGCTaGTTGGCTTCCTCCATAGTC +
Preference number: 4 (lower is better)
Translates to: SCDRELTPPCSSFQLHGFASRRS*LASSIV
Trigger: GACTATGGAGGAAGCCAACCAGCTCCTGCGGGACGC...AAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TGGCTTGTGTTCAAGCCCTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCAGCCCTAGACACTCTCTaGACACTCCAGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: WLVFKPWFHPLLPVWTWAALDTL*TLQGSS
Trigger: GCTGCTGCCCTGGAGTGTCCAGAGAGTGTCTAGGGC...TGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAGGGCTTGAACACAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGAGATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCCTTGTGTTCAAGCCCTaGTTCCATCCCTTACTACCT +
Preference number: 4 (lower is better)
Translates to: RDGSGPDQEACVCSDCPPLVFKP*FHPLLP
Trigger: AGGTAGTAAGGGATGGAACCAGGGCTTGAACACAAG...GGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAATGCCTCATACCCCAATCCCCACCCTTTGGGATaGACAAACTCGGGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: KPTPKRVCTHHGNASYPNPHPLG*TNSGVS
Trigger: ACTGACTCCCGAGTTTGTCCATCCCAAAGGGTGGGG...ATTGGGGTATGAGGCATTCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp ACCCGTGATCGTCCAGAGGGGCTGGGGGTCCAACCCAGACAGGGTCACACAGCACTCAGTTTCCCCATCTaGAATAAACCATTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: TRDRPEGLGVQPRQGHTALSFPI*NKPLSP
Trigger: TGGGGACAATGGTTTATTCCAGATGGGGAAACTGAG...TGCTGTGTGACCCTGTCTGGGTTGGACCCCCAGCCCCTCTGGACGATCACGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGGTCCATGAAAGAACCTaGATTCGCACCCGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: RELTPPCSSFQLHGFAGRVHERT*IRTRAH
Trigger: ATGGGCCCGGGTGCGAATCCAGGTTCTTTCATGGAC...CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CAA 72 bp CTTAGACGAGGGCCCCAAACAGACCATAAGCGGCCTTaGCAATACAGCCCCTTGTGCTTCCCGAGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: LRRGPQTDHKRP*QYSPLCFPRAL
Trigger: TAGGGCTCTCGGGAAGCACAAGGGGCTGTATTGCAAAGGCCGCTTATGGTCTGTTTGGGGCCCTCGTCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAACGCTTGGTGAGGCCTaGGATGACAATGGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: LGILETQLGERPQLSLQLTLGEA*DDNGVK
Trigger: TTTGACCCCATTGTCATCTCAGGCCTCACCAAGCGT...TAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGACGCTTGGTGAGGCCTaGGATGACAATGGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGTLGEA*DDNGVK
Trigger: TTTGACCCCATTGTCATCTCAGGCCTCACCAAGCGT...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCATGCCAGACCAACAGATaGATGAGTGGGTGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPCQTNR*MSGWPL
Trigger: AAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCA...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CAAAGAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGACTCTCTCCTCTCGGCTaGGCAGCCTGTGCCAACCCT +
Preference number: 4 (lower is better)
Translates to: QRITHFQNQRASTSWDPRLSPLG*AACANP
Trigger: AGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGAG...TCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GGATCCCAGACGCCCCAACTTAAGAGTCTCATAAGTGGGGACCAGATTCTGGGAGGCCGAGTCTCTAGATaGAGTGGCTCCCCATCAGGA +
Preference number: 4 (lower is better)
Translates to: GSQTPQLKSLISGDQILGGRVSR*SGSPSG
Trigger: TCCTGATGGGGAGCCACTTCATCTAGAGACTCGGCC...TCCCAGAATCTGGTCCCCACTTATGAGACTCTTAAGTTGGGGCGTCTGGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TGTGAGCTAAAGCCCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCGGCCGAGTCTCTAGATaGAGTGGCTCCCCATCAGGA +
Preference number: 4 (lower is better)
Translates to: CELKPLTLVPLSRYSLVFGRVSR*SGSPSG
Trigger: TCCTGATGGGGAGCCACTTCATCTAGAGACTCGGCC...GAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGGGCTTTAGCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTTTCCTGAGACCCCTGTaGGAACTGGGCCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: CSSFQLHGFAGRKCSLHLFLRPL*ELGQAK
Trigger: CTTTGCCTGGCCCAGTTCTCACAGGGGTCTCAGGAA...AAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTTTCCTGAGACCCCTGTaGGAACTGGGCCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SCDRELTPPCSSFQLHGFFLRPL*ELGQAK
Trigger: CTTTGCCTGGCCCAGTTCTCACAGGGGTCTCAGGAA...AAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCGAGGAGAAAGAACAGACCTCTTaGCTCCTCATCTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: RGPDCILLGEWQRPQPEEKEQTS*LLICSL
Trigger: GAGGGAACAGATGAGGAGTCAAGAGGTCTGTTCTTT...CTCCTCGGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGAAAGAAATATTGCATATaGGGAGGCCGGCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGKKYCI*GGRHGW
Trigger: CCAGCCATGCCGGCCTCCTCATATGCAATATTTCTT...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGAAGAAATATTGCATATaGGGAGGCCGGCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: EEVLPTSSTSPRRPHRDLKKYCI*GGRHGW
Trigger: CCAGCCATGCCGGCCTCCTCATATGCAATATTTCTT...CAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp AAGCCACTGCAACCCCTGGTGGGACAAAGACTTAGACGAGGGCCCCAAACAGACGTCGATGGTAATGACTaGCTTGTTCCGGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: KPLQPLVGQRLRRGPQTDVDGND*LVPEGG
Trigger: ACCTCCCTCCGGAACAAGTCAGTCATTACCATCGAC...GTCTGTTTGGGGCCCTCGTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGCGAGGAAAAGGGAGTTaGAGACAAGGATCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: DQQMNEWVAASPAQLRVWRGKGS*RQGSAL
Trigger: CAAAGCCGATCCTTGTCTTCAACTCCCTTTTCCTCG...CCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp AAGCCACTGCAACCCCTGGTGGGACAAAGACTTAGACGAGGGCCCCAAACAGACAACTCGGGAGTCAGTTaGGCCCTTTGCCCAACTAAC +
Preference number: 4 (lower is better)
Translates to: KPLQPLVGQRLRRGPQTDNSGVS*ALCPTN
Trigger: GTTAGTTGGGCAAAGGGCTCAACTGACTCCCGAGTT...GTCTGTTTGGGGCCCTCGTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGATCTTTAGCCTTGGGCTaGCCTGCCAGAAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LHGFAGRKCSLHLRPLQGSLALG*PARRAE
Trigger: TTCTGCCCTTCTGGCAGGTCAGCCCAAGGCTAAAGA...TCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp AAGCCACTGCAACCCCTGGTGGGACAAAGACTTAGACGAGGGCCCCAAACAGACTGGGTTGTGTTCTGGTaGGGTATTTCCCCCTCAACG +
Preference number: 4 (lower is better)
Translates to: KPLQPLVGQRLRRGPQTDWVVFW*GISPST
Trigger: CGTTGAGGGGGAAATACCTCACCAGAACACAACCCA...GTCTGTTTGGGGCCCTCGTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGAGAACGTCGGCCCCTCCTaGGTCCTTGCCTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: RDQASSQAQSLPDQQMNENVGPS*VLASFG
Trigger: TCCAAAGGAGGCAAGGACGCAGGAGGGGCCGACGTT...CTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATACCAGGTCCTCGCACTaGCGCAGGATTTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: NRDQASSQAQSLPDQQMNTRSSH*RRICTA
Trigger: CGCCGTGCAAATCCTGCGGCAGTGCGAGGACCTGGT...ATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp TTCTGGGAATCTCAGAATCTCAGGACTAGCAAGCCCCAAACCCCTATTCTGGAGGTCTCTCCAGCCACCTaGAGGAGGTGGATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: FWESQNLRTSKPQTPILEVSPAT*RRWMAS
Trigger: CGAGGCCATCCACCTCCTGCAGGTGGCTGGAGAGAC...CTCCAGAATAGGGGTTTGGGGCTTGCTAGTCCTGAGATTCTGAGATTCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TTCTGGGAATCTCAGAATCTCAGGACTAGCAAGCCCCAAACCCCTATTCTGGAGGGTCGTGCCCCGGGCTaGTGCCTGTGGTGTATAGGA +
Preference number: 4 (lower is better)
Translates to: FWESQNLRTSKPQTPILEGRAPG*CLWCIG
Trigger: TCCTATACACCACAGGCAGCAGCCCGGGGCACGACC...CTCCAGAATAGGGGTTTGGGGCTTGCTAGTCCTGAGATTCTGAGATTCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCAGAGCTTCTCCAAACATaGGCCAGAAGCCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPELLQT*ARSPPL
Trigger: GAGAGGAGGGCTTCTGGCGCATGTTTGGAGAAGCTC...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGGAGCTTCTCCAAACATaGGCCAGAAGCCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: QLIPAPWLCWEEVLPTSSELLQT*ARSPPL
Trigger: GAGAGGAGGGCTTCTGGCGCATGTTTGGAGAAGCTC...CGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCCCGTCATGATGGATaGCTCCAGTTCCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSARHDG*LQFPQQ
Trigger: CTGCTGAGGGAACTGGAGGCATCCATCATGACGGGC...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGACAGCTCCTCCATTTCTaGAGGAGAGGCTCGTACCTC +
Preference number: 4 (lower is better)
Translates to: LHGFAGRKCSLHLRPLQGQLLHF*RRGSYL
Trigger: GAGGTACGAGCCTCTCCTGCAGAAATGGAGGAGCTG...TCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAATGCCTCATACCCCAATCTGAAACCAAAGTCATaGCGCATGGGGTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: KPTPKRVCTHHGNASYPNLKPKS*RMGSLC
Trigger: GCACAAGGACCCCATGCGGCATGACTTTGGTTTCAG...ATTGGGGTATGAGGCATTCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACCTGAAACCAAAGTCATaGCGCATGGGGTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LLAAHSSSMALLGGSAPYLKPKS*RMGSLC
Trigger: GCACAAGGACCCCATGCGGCATGACTTTGGTTTCAG...GTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGCTGCTGTGTGCCGTGTaGGGCTTGCGGCTGATGATC +
Preference number: 4 (lower is better)
Translates to: PSPWSLYPVTPLFSLLHLLLCAV*GLRLMI
Trigger: GATCATCAGCCGCAAGCCGCACACGGCACACAGCAG...CAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CATTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGCGGCTGAGCAGCCTGTaGCAACCCTTCTTAAGGGAG +
Preference number: 4 (lower is better)
Translates to: HFSPISLPLSPLPPLIWLRLSSL*QPFLRE
Trigger: CTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCG...CAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGGAACTCACTCCTCCTTaGAGCTCATTCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GILETQLGERPQLSLQLGELTPP*SSFQLH
Trigger: ATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTC...CCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGACAGCTATGGCTGCTTaGATCCAGAAGCCACACCTC +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGTAMAA*IQKPHL
Trigger: GAGGTGTGGCTTCTGGATGCAAGCAGCCATAGCTGT...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGTCACACAGCTATGGCTaGTTGCATCCAGAAGCCACA +
Preference number: 4 (lower is better)
Translates to: GHLGDPTWRETPAVTPTRSHSYG*LHPEAT
Trigger: TGTGGCTTCTGGATGCAAGCAGCCATAGCTGTGTGA...CCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGCGAGCAGTGTTCCATaGTGGTGCCATCGATGGACA +
Preference number: 4 (lower is better)
Translates to: AAHSSSMALLGGSAPYIFASSVP*WCHRWT
Trigger: TGTCCATCGATGGCACCAGCATGGAACACTGCTCGC...GAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTTCACGACTGATTCCTaGTACCTCCAACCTAGTCTC +
Preference number: 4 (lower is better)
Translates to: GRKCSLHLRPLQGGPTETFTTDS*YLQPSL
Trigger: GAGACTAGGTTGGAGGTAGCAGGAATCAGTCGTGAA...GGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGAGATCCAGCAAGCTCTTaGAAAGCGCTTAGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGDPASS*KALRAR
Trigger: CCTTGCTCTAAGCGCTTTGCAAGAGCTTGCTGGATC...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTCCCTCGGAACTCCTCTaGAATGCTCTGTCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: SCDRELTPPCSSFQLHGFPSELL*NALSAA
Trigger: TGCCGCAGACAGAGCATTCCAGAGGAGTTCCGAGGG...AAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp ACCTGGGGAACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACGGCGGATATTGTCAATaGCCAGTAGCTTGTCGCCTG +
Preference number: 4 (lower is better)
Translates to: TWGTETKHHPRLRVCQTNGGYCQ*PVACRL
Trigger: CAGGCGACAAGCTACTGGCCATTGACAATATCCGCC...GTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTTCCCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTCCTCTGGGCATCTTaGAGACCCAACTTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHLLWAS*RPNLAR
Trigger: TCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAG...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AGGTCTCCATGGAGGCTGGCTCCTGTCTTCAGGTCTCATTGCAAATGTCGCCTCGCTCCATGGCTTTGCTaGGAGGAAGTGCTCCCTACA +
Preference number: 4 (lower is better)
Translates to: RSPWRLAPVFRSHCKCRLAPWLC*EEVLPT
Trigger: TGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGC...GAGGCGACATTTGCAATGAGACCTGAAGACAGGAGCCAGCCTCCATGGAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCCCAAACCCCTATTCTaGAGAAGCGAAGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHPKPLF*RSEGAG
Trigger: CCCAGCTCCTTCGCTTCTCCAGAATAGGGGTTTGGG...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGGTCTCCATGGAGGCTGGCTCCTGTCTTCAGGTCTCATTGCAAATGTCGCCTCATAGAGCCTGCCCAATaGGCCCAGAACCACAGTCTC +
Preference number: 4 (lower is better)
Translates to: RSPWRLAPVFRSHCKCRLIEPAQ*AQNHSL
Trigger: GAGACTGTGGTTCTGGGCCCATTGGGCAGGCTCTAT...GAGGCGACATTTGCAATGAGACCTGAAGACAGGAGCCAGCCTCCATGGAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGTGCAGATGGGTCAGTaGCCACACGGCCTACAGAAG +
Preference number: 4 (lower is better)
Translates to: SCDRELTPPCSSFQLHGFVQMGQ*PHGLQK
Trigger: CTTCTGTAGGCCGTGTGGCCACTGACCCATCTGCAC...AAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTAGATGGAGGTGGGAGTaGGTGCCCCGTTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSRWRWE*VPRFPE
Trigger: CTCAGGAAAACGGGGCACCCACTCCCACCTCCATCT...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGATCCCAGACGCCCCAACTTAAGAGTCTCATAAGTGGGGACCAGATTCTGGGAGGAGACAGATGGAGGTaGGAGTGGGTGCCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: GSQTPQLKSLISGDQILGGDRWR*EWVPRF
Trigger: AAAACGGGGCACCCACTCCCACCTCCATCTGTCTCC...TCCCAGAATCTGGTCCCCACTTATGAGACTCTTAAGTTGGGGCGTCTGGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGAGATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCATCTGTTCCCTCAAATaGAAGAGCACTTTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: RDGSGPDQEACVCSDCPPICSLK*KSTFLA
Trigger: GGCCAGAAAAGTGCTCTTCCATTTGAGGGAACAGAT...GGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TTCTGGGAATCTCAGAATCTCAGGACTAGCAAGCCCCAAACCCCTATTCTGGAGCAGAGCCCAGCGAAGTaGAGGGGAGGGGTAAGGGAG +
Preference number: 4 (lower is better)
Translates to: FWESQNLRTSKPQTPILEQSPAK*RGGVRE
Trigger: CTCCCTTACCCCTCCCCTCCACTTCGCTGGGCTCTG...CTCCAGAATAGGGGTTTGGGGCTTGCTAGTCCTGAGATTCTGAGATTCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGCTCTTGGCTTTCACTTaGTGCCCTGTGACAGGTAGA +
Preference number: 4 (lower is better)
Translates to: GHLGDPTWRETPAVTPTRLLAFT*CPVTGR
Trigger: TCTACCTGTCACAGGGCACCAAGTGAAAGCCAAGAG...CCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGCTCCTCTAAAAGTGAGGGCTCTTaGCTTTCACTTGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: SLLSAEQPVPTLLKGGSSKSEGS*LSLGAL
Trigger: CAGGGCACCAAGTGAAAGCCAAGAGCCCTCACTTTT...AGAGGAGCCTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGACCTCGCCTGGAGTCCTaGAGTCAATGCAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: LHGFAGRKCSLHLRPLQGPRLES*SQCSFP
Trigger: GGGAAAACTGCATTGACTCCAGGACTCCAGGCGAGG...TCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTTGTGCCCATCTTCATaGGCACCTCCTCTAAGGACA +
Preference number: 4 (lower is better)
Translates to: APACSPPVTENSLLLAAHLCPSS*APPLRT
Trigger: TGTCCTTAGAGGAGGTGCCCATGAAGATGGGCACAA...ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGAGTGGCCAGGAGCTTGGTaGCCTCAAGCAGCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: RDQASSQAQSLPDQQMNEWPGAW*PQAASS
Trigger: ACTGCTCGCTGCTTGAGGCCACCAAGCTCCTGGCCA...CTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTATTGCAGGAAAAGGCGTaGTTCAAGGTCGGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: LGILETQLGERPQLSLQLLQEKA*FKVGEE
Trigger: TTCCTCGCCGACCTTGAACCACGCCTTTTCCTGCAA...TAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCACGGGGAAGGGTGCTaGGGTTGTTGCAGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: CSSFQLHGFAGRKCSLHLHGEGC*GCCRKR
Trigger: CCTTTTCCTGCAACAACCCCAGCACCCTTCCCCGTG...AAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCAGAGCACGACCTCCGTaGTCTCCGTGTGCACAATCT +
Preference number: 4 (lower is better)
Translates to: AAHSSSMALLGGSAPYIFRARPP*SPCAQS
Trigger: AGATTGTGCACACGGAGACCACGGAGGTCGTGCTCT...GAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATAGAGCACGACCTCCGTaGTCTCCGTGTGCACAATCT +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHRARPP*SPCAQS
Trigger: AGATTGTGCACACGGAGACCACGGAGGTCGTGCTCT...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AAGCCACTGCAACCCCTGGTGGGACAAAGACTTAGACGAGGGCCCCAAACAGACATGTTGCCCAGGGGCTaGATGATGGAAGCAAATGGC +
Preference number: 4 (lower is better)
Translates to: KPLQPLVGQRLRRGPQTDMLPRG*MMEANG
Trigger: GCCATTTGCTTCCATCATCCAGCCCCTGGGCAACAT...GTCTGTTTGGGGCCCTCGTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CATTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGGGTCTCCATGGAGGCTaGCTCCTGTCTTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: HFSPISLPLSPLPPLIWLGLHGG*LLSSGL
Trigger: GAGACCTGAAGACAGGAGCCAGCCTCCATGGAGACC...CAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TGGCTTGTGTTCAAGCCCTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCATCCTCCAGGTCTCCATaGAGGCTGGCTCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: WLVFKPWFHPLLPVWTWASSRSP*RLAPVF
Trigger: GAAGACAGGAGCCAGCCTCCATGGAGACCTGGAGGA...TGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAGGGCTTGAACACAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCCAGGCCTCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGCCCTTACTACCTGTGTaGACTTGGGCAAATTACGTA +
Preference number: 4 (lower is better)
Translates to: PRPLSSRLSSLCQPFLREPLLPV*TWANYV
Trigger: TACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGG...CTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGAGGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCAGCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCCTACCCCCATTTTCTaGCTCTTTCTGACAGCCTAT +
Preference number: 4 (lower is better)
Translates to: PAPACSPPVTENSLLLAAPTPIF*LFLTAY
Trigger: ATAGGCTGTCAGAAAGAGCCAGAAAATGGGGGTAGG...AGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CAA 72 bp GAGACGCTGAAACCAAAGTCATGCCGCATGGGGTCCTaGTGCAGGGTCACCTTGTGCATCTCCAAGGGTGTA +
Preference number: 4 (lower is better)
Translates to: ETLKPKSCRMGS*CRVTLCISKGV
Trigger: TACACCCTTGGAGATGCACAAGGTGACCCTGCACAAGGACCCCATGCGGCATGACTTTGGTTTCAGCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430219.2
3UTR CAA 72 bp TCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTaGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTC +
Preference number: 4 (lower is better)
Translates to: SLLLAAHSSSMA*LGGSAPYIFDL
Trigger: GAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
3UTR CAA 72 bp GGGATGAACCATCCCCATGAGAAGCCAGAAGAAATATaGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GMNHPHEKPEEI*HMRRPAWLGGP
Trigger: TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTCATGGGGATGGTTCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
3UTR CAA 72 bp CAGCCCCATTCCCCTCCCAGGCCTTCTTTCTCTTCCTaGAGACCGTCAAACTCGTTCCTATCTCAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: QPHSPPRPSFSS*RPSNSFLSQGL
Trigger: AAGGCCCTGAGATAGGAACGAGTTTGACGGTCTCAAGGAAGAGAAAGAAGGCCTGGGAGGGGAATGGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp AACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGGATTCCATCGACACTaGGCAGCCTGTCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: NRDQASSQAQSLPDQQMNGFHRH*AACRPP
Trigger: AGGTGGGCGACAGGCTGCTCAGTGTCGATGGAATCC...ATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp ATTCTACCTGCTACATGCCCAGCCCTGTACAGCTGGGAGATCTGGCAGCAGTCAACATCATACTCCACCTaGAAGAGTGCCTCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ILPATCPALYSWEIWQQSTSYST*KSASWL
Trigger: CAGCCACGAGGCACTCTTTCAGGTGGAGTATGATGT...TGACTGCTGCCAGATCTCCCAGCTGTACAGGGCTGGGCATGTAGCAGGTAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTTTTTCTCGGGGTGGAGAGCGGTaGCACAGGATGCCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: LNKHFGHPPLGKSVPSFSRGGER*HRMPRW
Trigger: CCAACGAGGCATCCTGTGTCACCGCTCTCCACCCCG...AGAAAAAGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR TCA 90 bp TCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTAGACCAACAGATGAATaGGTGGGTGGCCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SCDRELTPPCSSFQLHGFRPTDE*VGGRFS
Trigger: GGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCT...AAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp CGGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGTTCAGACTGAGATGCTaGAATCAAAGAATCACCCAC +
Preference number: 4 (lower is better)
Translates to: RHGWEAHRGPDCILLGEWFRLRC*NQRITH
Trigger: GTGGGTGATTCTTTGATTTCAGCATCTCAGTCTGAA...CCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TGGCTTGTGTTCAAGCCCTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCATCACTGGATGGCAGGTaGATGGAAGCTCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: WLVFKPWFHPLLPVWTWASLDGR*MEAPGS
Trigger: AGACCCTGGAGCTTCCATTCACCTGCCATCCAGTGA...TGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAGGGCTTGAACACAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GGATCCCAGACGCCCCAACTTAAGAGTCTCATAAGTGGGGACCAGATTCTGGGATCACTTGGTGCCCTGTaGCAGGTAGACAGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GSQTPQLKSLISGDQILGSLGAL*QVDSAL
Trigger: AAGGGCACTGTCTACCTGTCACAGGGCACCAAGTGA...TCCCAGAATCTGGTCCCCACTTATGAGACTCTTAAGTTGGGGCGTCTGGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGACCTCACCCTCAAAAGTaGGGGCTCTTGGCTTTCACT +
Preference number: 4 (lower is better)
Translates to: LHGFAGRKCSLHLRPLQGPHPQK*GLLAFT
Trigger: AGTGAAAGCCAAGAGCCCTCACTTTTGAGGGTGAGG...TCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCGATGAACCATCCCCATaGGAAGCCAGAAGAAATATT +
Preference number: 4 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVDEPSP*EARRNI
Trigger: AATATTTCTTCTGGCTTCTCATGGGGATGGTTCATC...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATTTCAAGTCGGGGATaGACCATCCCCATGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LLAAHSSSMALLGGSAPYISSRG*TIPMRS
Trigger: GCTTCTCATGGGGATGGTTCATCCCCGACTTGAAAT...GTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCATTTCAAGTCGGGGATaGACCATCCCCATGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFISSRG*TIPMRS
Trigger: GCTTCTCATGGGGATGGTTCATCCCCGACTTGAAAT...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp ACCTGGGGAACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACCGAGGAAAAGGGAGTTaGAGACAAGGATCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TWGTETKHHPRLRVCQTNRGKGS*RQGSAL
Trigger: CAAAGCCGATCCTTGTCTTCAACTCCCTTTTCCTCG...GTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTTCCCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp TGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTTCTTTAGCCTTGGGCTaGCCTGCCAGAAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: CSSFQLHGFAGRKCSLHLSLALG*PARRAE
Trigger: TTCTGCCCTTCTGGCAGGTCAGCCCAAGGCTAAAGA...AAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCTGCCTGGAGGAACATTTGTATTTaGACAAGATCCTTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: WVAASPAQLRVWEPGSAWRNICI*TRSLVC
Trigger: ACACACCAAGGATCTTGTTCAAATACAAATGTTCCT...CCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp AGACCTGAGGCTGCCCTCCTGCCACTACCTTCCCAACCTGGGCTAAAGAGACTCGGGAAGGAATGCATGTaGACTGCTCTAACAGATCCT +
Preference number: 4 (lower is better)
Translates to: RPEAALLPLPSQPGLKRLGKECM*TALTDP
Trigger: AGGATCTGTTAGAGCAGTTCACATGCATTCCTTCCC...GAGTCTCTTTAGCCCAGGTTGGGAAGGTAGTGGCAGGAGGGCAGCCTCAGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619221.4
CDS-3UTR GCA 90 bp TTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGTACTGGAATGCTCTGTCTaGGGCACGCCAGGGAAACGT +
Preference number: 4 (lower is better)
Translates to: FLSHLPPSFSSSSTDLAVLECSV*GTPGKR
Trigger: ACGTTTCCCTGGCGTGCCGCAGACAGAGCATTCCAG...TACAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGAGGGAACTCCTCTGGAATaGTCTGTCTGCGGCACGCCA +
Preference number: 4 (lower is better)
Translates to: RDQASSQAQSLPDQQMNEGTPLE*SVCGTP
Trigger: TGGCGTGCCGCAGACAGAGCATTCCAGAGGAGTTCC...CTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp AGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGAGGGTGCCCGTCCTGTGTaGCACGCTGCCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: RDQASSQAQSLPDQQMNEGARPV*HAAFLD
Trigger: ATCAAGAAAGGCAGCGTGGCACACAGGACGGGCACC...CTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATTCCTTTCAGGGCATCTaGTGGGTCCTCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHSFQGI*WVLISI
Trigger: GATGCTGATGAGGACCCAGCAGATGCCCTGAAAGGA...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTGAAACCAAAGTCATaGCGCATGGGGTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHLKPKS*RMGSLC
Trigger: GCACAAGGACCCCATGCGGCATGACTTTGGTTTCAG...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCGAACTCACTCCTCCTTaGAGCTCATTCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFELTPP*SSFQLH
Trigger: ATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTC...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACCACGCATCATGGGAATaGCTCATACCCCAATGCATG +
Preference number: 4 (lower is better)
Translates to: LLAAHSSSMALLGGSAPYHASWE*LIPQCM
Trigger: CATGCATTGGGGTATGAGGCATTCCCATGATGCGTG...GTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGAGAAGGCCCATAGAGCCTaGCCAATGGGCCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: RDQASSQAQSLPDQQMNEKAHRA*PMGPEP
Trigger: TGGTTCTGGGCCCATTGGGCAGGCTCTATGGGCCTT...CTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp ATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATTTAAGGGATGCTGGTaGTTCCAGATTTCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: MNEWVAASPAQLRVWEPGFKGCW*FQISSG
Trigger: CCCACTTGAAATCTGGAAGCACCAGCATCCCTTAAA...TCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGACCATAAGCGGCCTTTaGAATACAGCCCCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRTISGL*NTAPCA
Trigger: AGCACAAGGGGCTGTATTGCAAAGGCCGCTTATGGT...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGTATCCCAGCGGTGCAGCTaGTCACTCCTCTGCACTTTC +
Preference number: 4 (lower is better)
Translates to: FLSHLPPSFSSSSTDLAVSQRCS*SLLCTF
Trigger: GAAAGTGCAGAGGAGTGAGCAGCTGCACCGCTGGGA...TACAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTTGTTCCCTTCTTCGCTaGCTCCTCCGCCCCATTGTA +
Preference number: 4 (lower is better)
Translates to: CSSFQLHGFAGRKCSLHLCSLLR*LLRPIV
Trigger: TACAATGGGGCGGAGGAGGCAGCGAAGAAGGGAACA...AAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp ACTGATCTGGCTGTAAAGAGGAGCGCTACCGCCTCACAGGTCCTGCGTCCATCGCCTGCCACCAGAATGTaGAGACATGACCTAAATCTG +
Preference number: 4 (lower is better)
Translates to: TDLAVKRSATASQVLRPSPATRM*RHDLNL
Trigger: CAGATTTAGGTCATGTCTGCACATTCTGGTGGCAGG...CGATGGACGCAGGACCTGTGAGGCGGTAGCGCTCCTCTTTACAGCCAGATCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCTGCCTCTGGCTTTCTaGTGCGCAGAGAATCAAATT +
Preference number: 4 (lower is better)
Translates to: QQMNEWVAASPAQLRVWELPLAF*CAENQI
Trigger: AATTTGATTCTCTGCGCAGCAGAAAGCCAGAGGCAG...CTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TTCTGGGAATCTCAGAATCTCAGGACTAGCAAGCCCCAAACCCCTATTCTGGAGCCTTGGCCTTCCCCCTaGCTACACCACTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: FWESQNLRTSKPQTPILEPWPSP*LHHSQD
Trigger: GTCTTGGGAGTGGTGTAGGCAGGGGGAAGGCCAAGG...CTCCAGAATAGGGGTTTGGGGCTTGCTAGTCCTGAGATTCTGAGATTCCCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AAGCCACTGCAACCCCTGGTGGGACAAAGACTTAGACGAGGGCCCCAAACAGACGATCCAGCAAGCTCTTaGAAAGCGCTTAGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: KPLQPLVGQRLRRGPQTDDPASS*KALRAR
Trigger: CCTTGCTCTAAGCGCTTTGCAAGAGCTTGCTGGATC...GTCTGTTTGGGGCCCTCGTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GGGCTCTTGGCTTTCACTTGGTGCCCTGTGACAGGTAGACAGTGCCCTTTCACTCAGCCTATGCCTACCTaGCTGCCTCTCTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: GLLAFTWCPVTGRQCPFTQPMPT*LPLSMC
Trigger: ACACATAGAGAGAGGCAGGCAGGTAGGCATAGGCTG...AGTGAAAGGGCACTGTCTACCTGTCACAGGGCACCAAGTGAAAGCCAAGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CAAAGAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGACGTCCTTGCCTCCTTTaGAGTAGGGCCCATCGTCCG +
Preference number: 4 (lower is better)
Translates to: QRITHFQNQRASTSWDPRRPCLL*SRAHRP
Trigger: CGGACGATGGGCCCTACTCCAAAGGAGGCAAGGACG...TCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGAGGTGATGATCTCATCGTaGCGGAGCCTGGTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RDQASSQAQSLPDQQMNEVMISS*RSLVRW
Trigger: CCACCTGACCAGGCTCCGCCACGATGAGATCATCAC...CTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp ACTTCTTTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTGGTCCCCCACGTGGATaGCACCAGTCCTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: TSLNKHFGHPPLGKSVPSGPPRG*HQSSQP
Trigger: TGGCTGAGAGGACTGGTGCCATCCACGTGGGGGACC...AGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAAAGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CAAAGAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGACTCGTCAGCTGGGGTTaGGGTATAGCTCGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: QRITHFQNQRASTSWDPRLVSWG*GIARPP
Trigger: CGGAGGACGAGCTATACCCCAACCCCAGCTGACGAG...TCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TTCTGGGAATCTCAGAATCTCAGGACTAGCAAGCCCCAAACCCCTATTCTGGAGTCCCGTGTACGGACGTaGTTGACCTGCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: FWESQNLRTSKPQTPILESRVRT*LTCRTL
Trigger: CAGGGTCCTGCAGGTCAACCACGTCCGTACACGGGA...CTCCAGAATAGGGGTTTGGGGCTTGCTAGTCCTGAGATTCTGAGATTCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCAGTCACCACAGACCTaGGGAACAGAGACCAAGCAT +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHQSPQT*GTETKH
Trigger: ATGCTTGGTCTCTGTTCCCCAGGTCTGTGGTGACTG...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp AGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTGAGAGTGTGTCCTCTCATTCCAGCTCCATaGCTTTGCTGGGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: SPGVNAVFPSREALRVCPLIPAP*LCWEEV
Trigger: CACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAG...AGGACACACTCTCAGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCCTCATTCCAGCTCCATaGCTTTGCTGGGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: AAHSSSMALLGGSAPYIFLIPAP*LCWEEV
Trigger: CACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAG...GAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp ATTCTACCTGCTACATGCCCAGCCCTGTACAGCTGGGAGATCTGGCAGCAGTCACGTGTGCACGCATCATaGGAATGCCTCATACCCCAA +
Preference number: 4 (lower is better)
Translates to: ILPATCPALYSWEIWQQSRVHAS*ECLIPQ
Trigger: TTGGGGTATGAGGCATTCCCATGATGCGTGCACACG...TGACTGCTGCCAGATCTCCCAGCTGTACAGGGCTGGGCATGTAGCAGGTAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp ACCTGGGGAACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAAAAGTGAGGGCTCTTaGCTTTCACTTGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: TWGTETKHHPRLRVCQTNKSEGS*LSLGAL
Trigger: CAGGGCACCAAGTGAAAGCCAAGAGCCCTCACTTTT...GTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTTCCCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTCCTCGCCTGGAGTCCTaGAGTCAATGCAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSPRLES*SQCSFP
Trigger: GGGAAAACTGCATTGACTCCAGGACTCCAGGCGAGG...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGGTCTCCATGGAGGCTGGCTCCTGTCTTCAGGTCTCATTGCAAATGTCGCCTCATACTTTTGGGAGAATaGCAGAGGCCTCAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: RSPWRLAPVFRSHCKCRLILLGE*QRPQPE
Trigger: CTCGGGCTGAGGCCTCTGCCATTCTCCCAAAAGTAT...GAGGCGACATTTGCAATGAGACCTGAAGACAGGAGCCAGCCTCCATGGAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACTGATTGCATACTTTTaGGAGAATGGCAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGLIAYF*ENGRGL
Trigger: GAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAG...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGGGACCTGATTGCATACTTTTaGGAGAATGGCAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: KCSLHLRPLQGGPTETWDLIAYF*ENGRGL
Trigger: GAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAG...GTCCCAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGCGCTCACTGGGGAAAGGTGTCAGGAAATTTCAAGTCGGGGATGAACCATCCCAGCCACTGCAACCCCTaGTGGGACAAAGACTTAGAC +
Preference number: 4 (lower is better)
Translates to: GAHWGKVSGNFKSGMNHPSHCNP*WDKDLD
Trigger: GTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTGGCT...GGGATGGTTCATCCCCGACTTGAAATTTCCTGACACCTTTCCCCAGTGAGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TGTGAGCTAAAGCCCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCCCTTCTCTGAAATGCTaGCCAGGAGCTTGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: CELKPLTLVPLSRYSLVFPSLKC*PGAWWP
Trigger: AGGCCACCAAGCTCCTGGCCAGCATTTCAGAGAAGG...GAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGGGCTTTAGCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGATGAGGACAGGGTCTCGGTaGCGAAGATGCCGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SPWSLYPVTPLFSLLHLMRTGSR*RRCRPG
Trigger: TCCAGGGCGGCATCTTCGCCACCGAGACCCTGTCCT...CATCAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCAAATTACGTAACCTCTCTGAAGCACACGAGGGGTaGGGAGGACAGGGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: LVPSLTTCVDLGKLRNLSEAHEG*GGQGLG
Trigger: ACCGAGACCCTGTCCTCCCCACCCCTCGTGTGCTTC...AGAGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGGCACAGAGGCCACTCTaGAGCAGTCTTAGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: QLIPAPWLCWEEVLPTSSAQRPL*SSLSFN
Trigger: GTTGAAGCTAAGACTGCTCCAGAGTGGCCTCTGTGC...CGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619221.4
3UTR CAA 72 bp TGCCTGCCTCTCTCTATGTGTACTGGGCCATGTGGCTaGTGTTCAAGCCCTGGTTCCATCCCTTACTACCTG +
Preference number: 4 (lower is better)
Translates to: CLPLSMCTGPCG*CSSPGSIPYYL
Trigger: CAGGTAGTAAGGGATGGAACCAGGGCTTGAACACAAGCCACATGGCCCAGTACACATAGAGAGAGGCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGTCATACCCCAATGCATaGCTGCGCTGGGGTATCCAG +
Preference number: 4 (lower is better)
Translates to: PSPWSLYPVTPLFSLLHLSYPNA*LRWGIQ
Trigger: CTGGATACCCCAGCGCAGTCATGCATTGGGGTATGA...CAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CATACCCCAATGCATGACTGCGCTGGGGTATCCAGCTCCTGCCTGCTCACCTCCACACCCTTCTCAAAATaGAGAGGGTCTCTGATTTGT +
Preference number: 4 (lower is better)
Translates to: HTPMHDCAGVSSSCLLTSTPFSK*RGSLIC
Trigger: ACAAATCAGAGACCCTCTTCATTTTGAGAAGGGTGT...GGAGGTGAGCAGGCAGGAGCTGGATACCCCAGCGCAGTCATGCATTGGGGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCCTCACCCTCAAAAGTaGGGGCTCTTGGCTTTCACT +
Preference number: 4 (lower is better)
Translates to: CSSFQLHGFAGRKCSLHLPHPQK*GLLAFT
Trigger: AGTGAAAGCCAAGAGCCCTCACTTTTGAGGGTGAGG...AAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTTTTTCTCAAGCCGAGAGGCCCTaGGAGTGTGTCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LNKHFGHPPLGKSVPSFSQAERP*ECVLSS
Trigger: GCTGGACAGGACACACTCTCAGGGCCTCTCGGCTTG...AGAAAAAGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CAGAGTCTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGTATTTGCTTACTTGTTaGTTGTCTGCCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: QSLPDQQMNEWVAASPAQYLLTC*LSACHQ
Trigger: CTGGTGGCAGGCAGACAATCAACAAGTAAGCAAATA...CTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGCAAAGCCAAAGCTATTaGCCTCCTTGTAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGQSQSY*PPCRGR
Trigger: TCTCCCTCTACAAGGAGGGCAATAGCTTTGGCTTTG...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GGATCCCAGACGCCCCAACTTAAGAGTCTCATAAGTGGGGACCAGATTCTGGGACTGAAACCAAAGTCATaGCGCATGGGGTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: GSQTPQLKSLISGDQILGLKPKS*RMGSLC
Trigger: GCACAAGGACCCCATGCGGCATGACTTTGGTTTCAG...TCCCAGAATCTGGTCCCCACTTATGAGACTCTTAAGTTGGGGCGTCTGGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGAACTCACTCCTCCTTaGAGCTCATTCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: AAHSSSMALLGGSAPYIFELTPP*SSFQLH
Trigger: ATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTC...GAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp CTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCAAATTACGTAACCTCTCTGGGGTATCCAGCTCCTaGCTGCTCACCTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LVPSLTTCVDLGKLRNLSGVSSS*LLTSCD
Trigger: GTCACAGGAGGTGAGCAGGCAGGAGCTGGATACCCC...AGAGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGTCACGCATCATGGGAATaGCTCATACCCCAATGCATG +
Preference number: 4 (lower is better)
Translates to: LLASRSHTSAVLSLTLKSHASWE*LIPQCM
Trigger: CATGCATTGGGGTATGAGGCATTCCCATGATGCGTG...ACTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGTTCACACAGCTATGGCTaGTTGCATCCAGAAGCCACA +
Preference number: 4 (lower is better)
Translates to: LLASRSHTSAVLSLTLKSSHSYG*LHPEAT
Trigger: TGTGGCTTCTGGATGCAAGCAGCCATAGCTGTGTGA...ACTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CAAAGAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGATCCCAGCGGTGCAGCTaGTCACTCCTCTGCACTTTC +
Preference number: 4 (lower is better)
Translates to: QRITHFQNQRASTSWDPRSQRCS*SLLCTF
Trigger: GAAAGTGCAGAGGAGTGAGCAGCTGCACCGCTGGGA...TCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGAGGGGTGCTGGGGTTGTTaGAGGAAAAGGCGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: RDQASSQAQSLPDQQMNEGCWGC*RKRRGS
Trigger: TGAACCACGCCTTTTCCTGCAACAACCCCAGCACCC...CTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR GCA 90 bp GCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTACTTGTTGATTGTCTaGCTGCCACCAGAATGTGCA +
Preference number: 4 (lower is better)
Translates to: APACSPPVTENSLLLAAHYLLIV*LPPECA
Trigger: TGCACATTCTGGTGGCAGGCAGACAATCAACAAGTA...ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CAAGCCCCAAACCCCTATTCTGGAGAAGCGAAGGAGCTGGGCTCCCATCCGAAGGTCTTCAGGTCTCATTaGAAATGTCGCCTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: QAPNPYSGEAKELGSHPKVFRSH*KCRLLR
Trigger: TCTCAAGAGGCGACATTTGCAATGAGACCTGAAGAC...CTTCGGATGGGAGCCCAGCTCCTTCGCTTCTCCAGAATAGGGGTTTGGGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGGCAGAGAATCAAATTTaGTCCCCCTACCCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRAENQI*SPYPSL
Trigger: AAGGCTTGGGTAGGGGGAGCAAATTTGATTCTCTGC...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGATGCCTTGGCCTTCCCCCTaGCTACACCACTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: SPWSLYPVTPLFSLLHLMPWPSP*LHHSQD
Trigger: GTCTTGGGAGTGGTGTAGGCAGGGGGAAGGCCAAGG...CATCAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTATGCCTACCTGCCTaGCTCTCTCTATGTGTACTG +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHLCLPA*LSLCVL
Trigger: CAGTACACATAGAGAGAGGCAGGCAGGTAGGCATAG...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GGGCTCTTGGCTTTCACTTGGTGCCCTGTGACAGGTAGACAGTGCCCTTTCACTCTATGCCTACCTGCCTaGCTCTCTCTATGTGTACTG +
Preference number: 4 (lower is better)
Translates to: GLLAFTWCPVTGRQCPFTLCLPA*LSLCVL
Trigger: CAGTACACATAGAGAGAGGCAGGCAGGTAGGCATAG...AGTGAAAGGGCACTGTCTACCTGTCACAGGGCACCAAGTGAAAGCCAAGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACGGAATGCATGTGAACTaGTCTAACAGATCCTCACCC +
Preference number: 4 (lower is better)
Translates to: LLAAHSSSMALLGGSAPYGMHVN*SNRSSP
Trigger: GGGTGAGGATCTGTTAGAGCAGTTCACATGCATTCC...GTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619221.4
CDS-3UTR CCA 90 bp CTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCAAATTACGTAACCTCTCTCGTCCTTGCCTCCTTTaGAGTAGGGCCCATCGTCCG +
Preference number: 4 (lower is better)
Translates to: LVPSLTTCVDLGKLRNLSRPCLL*SRAHRP
Trigger: CGGACGATGGGCCCTACTCCAAAGGAGGCAAGGACG...AGAGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCAAATTACGTAACCTCTCTCTCGTCAGCTGGGGTTaGGGTATAGCTCGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: LVPSLTTCVDLGKLRNLSLVSWG*GIARPP
Trigger: CGGAGGACGAGCTATACCCCAACCCCAGCTGACGAG...AGAGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGCAACAGATGAATGAGTaGGTGGCCGCTTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PSPWSLYPVTPLFSLLHLQQMNE*VAASPA
Trigger: GGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTG...CAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGAGCTCCTCTGGGCATCTTaGAGACCCAACTTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: RDQASSQAQSLPDQQMNELLWAS*RPNLAR
Trigger: TCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAG...CTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGTGTGCACGCATCATaGGAATGCCTCATACCCCAA +
Preference number: 4 (lower is better)
Translates to: CSSFQLHGFAGRKCSLHLRVHAS*ECLIPQ
Trigger: TTGGGGTATGAGGCATTCCCATGATGCGTGCACACG...AAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CAAAGAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGAAGATGGAGGTGGGAGTaGGTGCCCCGTTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: QRITHFQNQRASTSWDPRRWRWE*VPRFPE
Trigger: CTCAGGAAAACGGGGCACCCACTCCCACCTCCATCT...TCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGGAGACAGATGGAGGTaGGAGTGGGTGCCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: NRDQASSQAQSLPDQQMNGDRWR*EWVPRF
Trigger: AAAACGGGGCACCCACTCCCACCTCCATCTGTCTCC...ATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CATTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGAGTGCCCTTTCACTCTaGGCTGAGTACACGGGAATC +
Preference number: 4 (lower is better)
Translates to: HFSPISLPLSPLPPLIWLSALSL*AEYTGI
Trigger: GATTCCCGTGTACTCAGCCCAGAGTGAAAGGGCACT...CAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTGAGAGTGTGTCCTCTCTTGGCTTTCACTTaGTGCCCTGTGACAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SPGVNAVFPSREALRVCPLLAFT*CPVTGR
Trigger: TCTACCTGTCACAGGGCACCAAGTGAAAGCCAAGAG...AGGACACACTCTCAGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTGAGAGTGTGTCCTAAAAGTGAGGGCTCTTaGCTTTCACTTGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: SPGVNAVFPSREALRVCPKSEGS*LSLGAL
Trigger: CAGGGCACCAAGTGAAAGCCAAGAGCCCTCACTTTT...AGGACACACTCTCAGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATCTACCTGTGTGGACTTaGGCAAATTACGTAACCTCT +
Preference number: 4 (lower is better)
Translates to: APACSPPVTENSLLLAAHLPVWT*ANYVTS
Trigger: AGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAG...ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGTACAGCTGGGAGATCTaGCAGCAGTCACCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: PSPWSLYPVTPLFSLLHLYSWEI*QQSPEP
Trigger: AGGCTCAGGTGACTGCTGCCAGATCTCCCAGCTGTA...CAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp ACTTCTTTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTGCTCCACTGTGTAACTaGCGGCACCTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TSLNKHFGHPPLGKSVPSAPLCN*RHLWSP
Trigger: TGGAGACCACAGGTGCCGTCAGTTACACAGTGGAGC...AGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAAAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CAAAGAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGAAGACCAACAGATGAATaGGTGGGTGGCCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QRITHFQNQRASTSWDPRRPTDE*VGGRFS
Trigger: GGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCT...TCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CAAAGAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGATCACTGGATGGCAGGTaGATGGAAGCTCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QRITHFQNQRASTSWDPRSLDGR*MEAPGS
Trigger: AGACCCTGGAGCTTCCATTCACCTGCCATCCAGTGA...TCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp ACTGATCTGGCTGTAAAGAGGAGCGCTACCGCCTCACAGGTCCTGCGTCCATCGGGGAATAGACTTCTTTaGATAAGCACTTTGGACACC +
Preference number: 4 (lower is better)
Translates to: TDLAVKRSATASQVLRPSGNRLL*ISTLDT
Trigger: GGTGTCCAAAGTGCTTATTCAAAGAAGTCTATTCCC...CGATGGACGCAGGACCTGTGAGGCGGTAGCGCTCCTCTTTACAGCCAGATCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATAAAGAACAGACCTCTTaGCTCCTCATCTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHKEQTS*LLICSL
Trigger: GAGGGAACAGATGAGGAGTCAAGAGGTCTGTTCTTT...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp AACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATTCACTTGGTGCCCTGTaGCAGGTAGACAGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: NRDQASSQAQSLPDQQMNSLGAL*QVDSAL
Trigger: AAGGGCACTGTCTACCTGTCACAGGGCACCAAGTGA...ATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp AGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGAGCAGACCCTGGCGTCTTaGCTATTTCCACCATCAAGG +
Preference number: 4 (lower is better)
Translates to: RDQASSQAQSLPDQQMNEQTLAS*LFPPSR
Trigger: CCTTGATGGTGGAAATAGTCAAGACGCCAGGGTCTG...CTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp CTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCAAATTACGTAACCTCTCTCAGCCGCACCTTCTCTaGAATGCTGGCCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LVPSLTTCVDLGKLRNLSQPHLL*NAGQEL
Trigger: AAGCTCCTGGCCAGCATTTCAGAGAAGGTGCGGCTG...AGAGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTCGAGGAAAAGGGAGTTaGAGACAAGGATCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSRGKGS*RQGSAL
Trigger: CAAAGCCGATCCTTGTCTTCAACTCCCTTTTCCTCG...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR TCA 90 bp GGCGCTCACTGGGGAAAGGTGTCAGGAAATTTCAAGTCGGGGATGAACCATCCCGACCCATACAGAAGCTaGCTCTTGCCAATCCATGAT +
Preference number: 4 (lower is better)
Translates to: GAHWGKVSGNFKSGMNHPDPYRS*LLPIHD
Trigger: ATCATGGATTGGCAAGAGTCAGCTTCTGTATGGGTC...GGGATGGTTCATCCCCGACTTGAAATTTCCTGACACCTTTCCCCAGTGAGCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp ACCTGGGGAACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACTATTTGCTTACTTGTTaGTTGTCTGCCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: TWGTETKHHPRLRVCQTNYLLTC*LSACHQ
Trigger: CTGGTGGCAGGCAGACAATCAACAAGTAAGCAAATA...GTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTTCCCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGTCAAGGCCACCAGGATaGTTGGAGGTGATGCTCTTG +
Preference number: 4 (lower is better)
Translates to: PSPWSLYPVTPLFSLLHLSRPPG*LEVMLL
Trigger: CAAGAGCATCACCTCCAATCATCCTGGTGGCCTTGA...CAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGATGCGGCTGAGCAGCCTGTaGCAACCCTTCTTAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SPWSLYPVTPLFSLLHLMRLSSL*QPFLRE
Trigger: CTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCG...CATCAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGTATGCCTCATACCCCAATaGATGACTGCGCTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: FLSHLPPSFSSSSTDLAVCLIPQ*MTALGY
Trigger: ATACCCCAGCGCAGTCATGCATTGGGGTATGAGGCA...TACAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp ACTTCTTTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTAAGGCCCATAGAGCCTaGCCAATGGGCCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: TSLNKHFGHPPLGKSVPSKAHRA*PMGPEP
Trigger: TGGTTCTGGGCCCATTGGGCAGGCTCTATGGGCCTT...AGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAAAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGAGTCCTGGAGTCAATaGAGTTTTCCCAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: SCDRELTPPCSSFQLHGFESWSQ*SFPKPR
Trigger: TCTCGGCTTGGGAAAACTGCATTGACTCCAGGACTC...AAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AGGTCTCCATGGAGGCTGGCTCCTGTCTTCAGGTCTCATTGCAAATGTCGCCTCCCTCTGGCTTTCTGCTaGGCAGAGAATCAAATTTGC +
Preference number: 4 (lower is better)
Translates to: RSPWRLAPVFRSHCKCRLPLAFC*AENQIC
Trigger: GCAAATTTGATTCTCTGCGCAGCAGAAAGCCAGAGG...GAGGCGACATTTGCAATGAGACCTGAAGACAGGAGCCAGCCTCCATGGAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTGCCTCTGGCTTTCTaGTGCGCAGAGAATCAAATT +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHLPLAF*CAENQI
Trigger: AATTTGATTCTCTGCGCAGCAGAAAGCCAGAGGCAG...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGATCTACTGATTCTACCTaGTACATGCCCAGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: LHGFAGRKCSLHLRPLQGSTDST*YMPSPV
Trigger: TACAGGGCTGGGCATGTAGCAGGTAGAATCAGTAGA...TCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTTTTCAGGGCATCTGCTaGGTCCTCATCAGCATCACT +
Preference number: 4 (lower is better)
Translates to: CSSFQLHGFAGRKCSLHLFQGIC*VLISIT
Trigger: AGTGATGCTGATGAGGACCCAGCAGATGCCCTGAAA...AAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp TTCTGGGAATCTCAGAATCTCAGGACTAGCAAGCCCCAAACCCCTATTCTGGAGCCCAAACCCCTATTCTaGAGAAGCGAAGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FWESQNLRTSKPQTPILEPKPLF*RSEGAG
Trigger: CCCAGCTCCTTCGCTTCTCCAGAATAGGGGTTTGGG...CTCCAGAATAGGGGTTTGGGGCTTGCTAGTCCTGAGATTCTGAGATTCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGAGTTGGACACCCTCCACTaGGCAAGAGTGTCCCATCTT +
Preference number: 4 (lower is better)
Translates to: RDQASSQAQSLPDQQMNELDTLH*ARVSHL
Trigger: AAGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAA...CTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAAGGGTCTCTGATTTGTaGACACTGAGGACAATGATT +
Preference number: 4 (lower is better)
Translates to: CWEEVLPTSSTSPRRPHRRVSDL*TLRTMI
Trigger: AATCATTGTCCTCAGTGTCCACAAATCAGAGACCCT...TCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGTAATACTTTTGGGAGAATaGCAGAGGCCTCAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: FLSHLPPSFSSSSTDLAVILLGE*QRPQPE
Trigger: CTCGGGCTGAGGCCTCTGCCATTCTCCCAAAAGTAT...TACAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTGATTGCATACTTTTaGGAGAATGGCAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHLIAYF*ENGRGL
Trigger: GAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAG...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCACTACCTTCCCAACCTaGGCTAAAGAGACTCCATAT +
Preference number: 4 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFTTFPT*AKETPY
Trigger: ATATGGAGTCTCTTTAGCCCAGGTTGGGAAGGTAGT...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGCTACCTGTGTGGACTTaGGCAAATTACGTAACCTCT +
Preference number: 4 (lower is better)
Translates to: RELTPPCSSFQLHGFAGRLPVWT*ANYVTS
Trigger: AGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAG...CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGGCTCTTGGCTTTCACTTGGTGCCCTGTGACAGGTAGACAGTGCCCTTTCACTCTTGTGTTCAAGCCCTaGTTCCATCCCTTACTACCT +
Preference number: 4 (lower is better)
Translates to: GLLAFTWCPVTGRQCPFTLVFKP*FHPLLP
Trigger: AGGTAGTAAGGGATGGAACCAGGGCTTGAACACAAG...AGTGAAAGGGCACTGTCTACCTGTCACAGGGCACCAAGTGAAAGCCAAGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TGTGAGCTAAAGCCCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTAGAGGTTCCCACATaGAGGCTCACAGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: CELKPLTLVPLSRYSLVFLEVPT*RLTEEA
Trigger: TGCTTCCTCTGTGAGCCTCCATGTGGGAACCTCTAA...GAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGGGCTTTAGCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp ACTTCTTTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTTCATACCCCAATGCATaGCTGCGCTGGGGTATCCAG +
Preference number: 4 (lower is better)
Translates to: TSLNKHFGHPPLGKSVPSSYPNA*LRWGIQ
Trigger: CTGGATACCCCAGCGCAGTCATGCATTGGGGTATGA...AGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAAAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGTTCAGACTGAGATGCTaGAATCAAAGAATCACCCAC +
Preference number: 4 (lower is better)
Translates to: RELTPPCSSFQLHGFAGRFRLRC*NQRITH
Trigger: GTGGGTGATTCTTTGATTTCAGCATCTCAGTCTGAA...CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGACACCCTTCTCAAAATaGAGAGGGTCTCTGATTTGT +
Preference number: 4 (lower is better)
Translates to: RELTPPCSSFQLHGFAGRTPFSK*RGSLIC
Trigger: ACAAATCAGAGACCCTCTTCATTTTGAGAAGGGTGT...CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp AACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATCCCCTCCTAATATTGTaGGCTAAAGCCCCTCACCCT +
Preference number: 4 (lower is better)
Translates to: NRDQASSQAQSLPDQQMNPLLIL*AKAPHP
Trigger: AGGGTGAGGGGCTTTAGCTCACAATATTAGGAGGGG...ATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTTTTTCTCGCATGGGGTCCTTGTaGAGGGTCACCTTGTGCATC +
Preference number: 4 (lower is better)
Translates to: LNKHFGHPPLGKSVPSFSRMGSL*RVTLCI
Trigger: GATGCACAAGGTGACCCTGCACAAGGACCCCATGCG...AGAAAAAGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp ATTCTACCTGCTACATGCCCAGCCCTGTACAGCTGGGAGATCTGGCAGCAGTCATTTAAGGGATGCTGGTaGTTCCAGATTTCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: ILPATCPALYSWEIWQQSFKGCW*FQISSG
Trigger: CCCACTTGAAATCTGGAAGCACCAGCATCCCTTAAA...TGACTGCTGCCAGATCTCCCAGCTGTACAGGGCTGGGCATGTAGCAGGTAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATACAGCTATGGCTGCTTaGATCCAGAAGCCACACCTC +
Preference number: 4 (lower is better)
Translates to: NRDQASSQAQSLPDQQMNTAMAA*IQKPHL
Trigger: GAGGTGTGGCTTCTGGATGCAAGCAGCCATAGCTGT...ATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CAAAGAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGACAATACAGCCCCTTGTaGTTCCCGAGAGCCCTAAGA +
Preference number: 4 (lower is better)
Translates to: QRITHFQNQRASTSWDPRQYSPL*FPRALR
Trigger: TCTTAGGGCTCTCGGGAAGCACAAGGGGCTGTATTG...TCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTTTTTCTCTACCCCCAAGCCACTaGAACCCCTGGTGGGACAAA +
Preference number: 4 (lower is better)
Translates to: LNKHFGHPPLGKSVPSFSLPPSH*NPWWDK
Trigger: TTTGTCCCACCAGGGGTTGCAGTGGCTTGGGGGTAG...AGAAAAAGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp ACTTCTTTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTATCCACGGGGAAGGGTaGTGGGGTTGTTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: TSLNKHFGHPPLGKSVPSIHGEG*WGCCRK
Trigger: TTTCCTGCAACAACCCCAGCACCCTTCCCCGTGGAT...AGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAAAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTTCTACTGATTCTACCTaGTACATGCCCAGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSSTDST*YMPSPV
Trigger: TACAGGGCTGGGCATGTAGCAGGTAGAATCAGTAGA...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp TTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTTTTTCTTATTGTCTCCCCTGCTaGCCACCAACTCCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: LNKHFGHPPLGKSVPSFSYCLPC*PPTPSG
Trigger: TCCCGAGGGAGTTGGTGGGCAGCAGGGGAGACAATA...AGAAAAAGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619221.4
CDS-3UTR CCA 90 bp TTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTTTTTCTGTGCAGATGGGTCAGTaGCCACACGGCCTACAGAAG +
Preference number: 4 (lower is better)
Translates to: LNKHFGHPPLGKSVPSFSVQMGQ*PHGLQK
Trigger: CTTCTGTAGGCCGTGTGGCCACTGACCCATCTGCAC...AGAAAAAGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TTCTGGGAATCTCAGAATCTCAGGACTAGCAAGCCCCAAACCCCTATTCTGGAGTTGGACACCCTCCACTaGGCAAGAGTGTCCCATCTT +
Preference number: 4 (lower is better)
Translates to: FWESQNLRTSKPQTPILELDTLH*ARVSHL
Trigger: AAGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAA...CTCCAGAATAGGGGTTTGGGGCTTGCTAGTCCTGAGATTCTGAGATTCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGGCTCTTGGCTTTCACTTGGTGCCCTGTGACAGGTAGACAGTGCCCTTTCACTATCTGTTCCCTCAAATaGAAGAGCACTTTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GLLAFTWCPVTGRQCPFTICSLK*KSTFLA
Trigger: GGCCAGAAAAGTGCTCTTCCATTTGAGGGAACAGAT...AGTGAAAGGGCACTGTCTACCTGTCACAGGGCACCAAGTGAAAGCCAAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATCACTGCAACCCCTGGTaGGACAAAGACTTAGACGAG +
Preference number: 4 (lower is better)
Translates to: NRDQASSQAQSLPDQQMNHCNPW*DKDLDE
Trigger: CTCGTCTAAGTCTTTGTCCCACCAGGGGTTGCAGTG...ATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGCGCTCACTGGGGAAAGGTGTCAGGAAATTTCAAGTCGGGGATGAACCATCCCCTCAGTTTCCCCATCTaGAATAAACCATTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GAHWGKVSGNFKSGMNHPLSFPI*NKPLSP
Trigger: TGGGGACAATGGTTTATTCCAGATGGGGAAACTGAG...GGGATGGTTCATCCCCGACTTGAAATTTCCTGACACCTTTCCCCAGTGAGCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGAGTTAGAGGTTCCCACATaGAGGCTCACAGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: RDQASSQAQSLPDQQMNELEVPT*RLTEEA
Trigger: TGCTTCCTCTGTGAGCCTCCATGTGGGAACCTCTAA...CTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CAGAGTCTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGTTTGAACAAGATCCTTaGTGTGTAGTTCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: QSLPDQQMNEWVAASPAQFEQDP*CVVQSC
Trigger: GCAAGACTGAACTACACACCAAGGATCTTGTTCAAA...CTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CAA 72 bp CAAGCCCTGGTTCCATCCCTTACTACCTGTGTGGACTaGGGCAAATTACGTAACCTCTCTGTGCCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: QALVPSLTTCVD*GKLRNLSVPVS
Trigger: GGAAACAGGCACAGAGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAGGGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTTTTTCTGGCCATCTGAGACGCTaGAACCAAAGTCATGCCGCA +
Preference number: 4 (lower is better)
Translates to: LNKHFGHPPLGKSVPSFSGHLRR*NQSHAA
Trigger: TGCGGCATGACTTTGGTTTCAGCGTCTCAGATGGCC...AGAAAAAGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATTTCAGACTGAGATGCTaGAATCAAAGAATCACCCAC +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHFRLRC*NQRITH
Trigger: GTGGGTGATTCTTTGATTTCAGCATCTCAGTCTGAA...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp AACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATATTTCAAGTCGGGGATaGACCATCCCCATGAGAAGC +
Preference number: 4 (lower is better)
Translates to: NRDQASSQAQSLPDQQMNISSRG*TIPMRS
Trigger: GCTTCTCATGGGGATGGTTCATCCCCGACTTGAAAT...ATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp ACTTCTTTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTCACCGCGGGCCTGATTaGATACTTTTGGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: TSLNKHFGHPPLGKSVPSHRGPD*ILLGEW
Trigger: CCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTG...AGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAAAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTTGTGTAGTTCAGTCTTaGAGTATACAAGCTTTTGTG +
Preference number: 4 (lower is better)
Translates to: LPDQQMNEWVAASPAQLRCVVQS*SIQAFV
Trigger: CACAAAAGCTTGTATACTGCAAGACTGAACTACACA...ACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGTGTGTAGTTCAGTCTTaGAGTATACAAGCTTTTGTG +
Preference number: 4 (lower is better)
Translates to: DQQMNEWVAASPAQLRVWCVVQS*SIQAFV
Trigger: CACAAAAGCTTGTATACTGCAAGACTGAACTACACA...CCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATTTTCAGGGCATCTGCTaGGTCCTCATCAGCATCACT +
Preference number: 4 (lower is better)
Translates to: NRDQASSQAQSLPDQQMNFQGIC*VLISIT
Trigger: AGTGATGCTGATGAGGACCCAGCAGATGCCCTGAAA...ATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CCA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGGATTTTAAGGGATGCTaGTGCTTCCAGATTTCAAGT +
Preference number: 4 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGDFKGC*CFQISS
Trigger: ACTTGAAATCTGGAAGCACCAGCATCCCTTAAAATC...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGGATTTTAAGGGATGCTaGTGCTTCCAGATTTCAAGT +
Preference number: 4 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRDFKGC*CFQISS
Trigger: ACTTGAAATCTGGAAGCACCAGCATCCCTTAAAATC...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCAAGGGTCTCTGATTTGTaGACACTGAGGACAATGATT +
Preference number: 4 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPRVSDL*TLRTMI
Trigger: AATCATTGTCCTCAGTGTCCACAAATCAGAGACCCT...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGTAGGGTCTCTGATTTGTaGACACTGAGGACAATGATT +
Preference number: 4 (lower is better)
Translates to: LLASRSHTSAVLSLTLKSRVSDL*TLRTMI
Trigger: AATCATTGTCCTCAGTGTCCACAAATCAGAGACCCT...ACTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TGTGAGCTAAAGCCCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCGGGAATAGACTTCTTTaGATAAGCACTTTGGACACC +
Preference number: 4 (lower is better)
Translates to: CELKPLTLVPLSRYSLVFGNRLL*ISTLDT
Trigger: GGTGTCCAAAGTGCTTATTCAAAGAAGTCTATTCCC...GAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGGGCTTTAGCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGGGAATAGACTTCTTTaGATAAGCACTTTGGACACC +
Preference number: 4 (lower is better)
Translates to: SCDRELTPPCSSFQLHGFGNRLL*ISTLDT
Trigger: GGTGTCCAAAGTGCTTATTCAAAGAAGTCTATTCCC...AAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAGACTGTCCACCCGTaGTCGTCCAGAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GTFVFEQDPWCVVQSCSIQTVHP*SSRGAG
Trigger: CCCAGCCCCTCTGGACGATCACGGGTGGACAGTCTG...TATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAATGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGATGAACCATCCCCATaGGAAGCCAGAAGAAATATT +
Preference number: 4 (lower is better)
Translates to: SCDRELTPPCSSFQLHGFDEPSP*EARRNI
Trigger: AATATTTCTTCTGGCTTCTCATGGGGATGGTTCATC...AAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp CGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAGGAACATTTGTATTTaGACAAGATCCTTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: RELTPPCSSFQLHGFAGRRNICI*TRSLVC
Trigger: ACACACCAAGGATCTTGTTCAAATACAAATGTTCCT...CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp ACTTCTTTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTGAGTCCTGGAGTCAATaGAGTTTTCCCAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: TSLNKHFGHPPLGKSVPSESWSQ*SFPKPR
Trigger: TCTCGGCTTGGGAAAACTGCATTGACTCCAGGACTC...AGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAAAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp CAAAGAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGATTCACGACTGATTCCTaGTACCTCCAACCTAGTCTC +
Preference number: 4 (lower is better)
Translates to: QRITHFQNQRASTSWDPRFTTDS*YLQPSL
Trigger: GAGACTAGGTTGGAGGTAGCAGGAATCAGTCGTGAA...TCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGATCTGTTCCCTCAAATaGAAGAGCACTTTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PSPWSLYPVTPLFSLLHLICSLK*KSTFLA
Trigger: GGCCAGAAAAGTGCTCTTCCATTTGAGGGAACAGAT...CAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGATGCTCTTGGCTTTCACTTaGTGCCCTGTGACAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SPWSLYPVTPLFSLLHLMLLAFT*CPVTGR
Trigger: TCTACCTGTCACAGGGCACCAAGTGAAAGCCAAGAG...CATCAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATTTTGAACAAGATCCTTaGTGTGTAGTTCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHFEQDP*CVVQSC
Trigger: GCAAGACTGAACTACACACCAAGGATCTTGTTCAAA...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CAA 72 bp ACAGGTAACAGACCCAGGGTGAAAAGAACAGACCTCTaGACTCCTCATCTGTTCCCTCAAATGGAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: TGNRPRVKRTDL*TPHLFPQMEEH
Trigger: GTGCTCTTCCATTTGAGGGAACAGATGAGGAGTCAAGAGGTCTGTTCTTTTCACCCTGGGTCTGTTACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATTTTAAGGGATGCTGGTaGTTCCAGATTTCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: NRDQASSQAQSLPDQQMNFKGCW*FQISSG
Trigger: CCCACTTGAAATCTGGAAGCACCAGCATCCCTTAAA...ATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp AACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATTACTTGTTGATTGTCTaGCTGCCACCAGAATGTGCA +
Preference number: 4 (lower is better)
Translates to: NRDQASSQAQSLPDQQMNYLLIV*LPPECA
Trigger: TGCACATTCTGGTGGCAGGCAGACAATCAACAAGTA...ATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATAAGGGGCTGGGCTCGTTaGCGGCTCCCAATCATCCTC +
Preference number: 4 (lower is better)
Translates to: GTFVFEQDPWCVVQSCSIRGWAR*RLPIIL
Trigger: GAGGATGATTGGGAGCCGCCAACGAGCCCAGCCCCT...TATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAATGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp AACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATACTACCTTCCCAACCTaGGCTAAAGAGACTCCATAT +
Preference number: 4 (lower is better)
Translates to: NRDQASSQAQSLPDQQMNTTFPT*AKETPY
Trigger: ATATGGAGTCTCTTTAGCCCAGGTTGGGAAGGTAGT...ATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACTTGTCGGTGCCACCTaGGATAGTCAGGCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GTFVFEQDPWCVVQSCSILVGAT*DSQAQR
Trigger: ACGCTGGGCCTGACTATCTCAGGTGGCACCGACAAG...TATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAATGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATAGGCCCACCGCGGGCCTaGTTGCATACTTTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GTFVFEQDPWCVVQSCSIGPPRA*LHTFGR
Trigger: TCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCC...TATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAATGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp ACTTCTTTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTGTCTTCAGGTCTCATTaGAAATGTCGCCTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: TSLNKHFGHPPLGKSVPSVFRSH*KCRLLR
Trigger: TCTCAAGAGGCGACATTTGCAATGAGACCTGAAGAC...AGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAAAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATATGGTGTATAGGACCCTaGGCCCCCAAAGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: GTFVFEQDPWCVVQSCSIWCIGP*APKATL
Trigger: GAGGGTGGCTTTGGGGGCCCAGGGTCCTATACACCA...TATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAATGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACTCGTCAGCTGGGGTTaGGGTATAGCTCGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: GTFVFEQDPWCVVQSCSILVSWG*GIARPP
Trigger: CGGAGGACGAGCTATACCCCAACCCCAGCTGACGAG...TATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAATGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CCA 90 bp TCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGATGCCCTTACTACCTGTGTaGACTTGGGCAAATTACGTA +
Preference number: 4 (lower is better)
Translates to: SPWSLYPVTPLFSLLHLMPLLPV*TWANYV
Trigger: TACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGG...CATCAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR TCA 90 bp TTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTTTTTCTGATGAACCATCCCCATaGGAAGCCAGAAGAAATATT +
Preference number: 4 (lower is better)
Translates to: LNKHFGHPPLGKSVPSFSDEPSP*EARRNI
Trigger: AATATTTCTTCTGGCTTCTCATGGGGATGGTTCATC...AGAAAAAGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR GCA 90 bp GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATAGAACTCACTCCTCCTTaGAGCTCATTCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GTFVFEQDPWCVVQSCSIELTPP*SSFQLH
Trigger: ATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTC...TATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAATGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
3UTR CAA 72 bp ATAAACATTTCCTTTTTAACATCCAACATGTGTGGGTaGTGTTCTGGTGAGGTATTTCCCCCTCAACGTTTG +
Preference number: 4 (lower is better)
Translates to: INISFLTSNMCG*CSGEVFPPQRL
Trigger: CAAACGTTGAGGGGGAAATACCTCACCAGAACACAACCCACACATGTTGGATGTTAAAAAGGAAATGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS GCA 90 bp CTGCACTGCCGCAGGGTGGCCAGGGCGGTGGCATGGCTGGCCCCGTaGAGCGGGATTCCATCGACACTGAGCAGCCTGTCGCCCACCTTC +
Preference number: 5 (lower is better)
Translates to: LHCRRVARAVAWLAP*SGIPSTLSSLSPTF
Trigger: GAAGGTGGGCGACAGGCTGCTCAGTGTCGATGGAATCCCGCTGCACGGGGCCAGCCATGCCACCGCCCTGGCCACCCTGCGGCAGTGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413414.1
ENST00000422481.5
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 90 bp AGTGCCTCGTGGCTGCACTGCCGCAGGGTGGCCAGGGCGGTGGCATaGCTGGCCCCGTGCAGCGGGATTCCATCGACACTGAGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: SASWLHCRRVARAVA*LAPCSGIPSTLSSL
Trigger: CAGGCTGCTCAGTGTCGATGGAATCCCGCTGCACGGGGCCAGCCATGCCACCGCCCTGGCCACCCTGCGGCAGTGCAGCCACGAGGCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413414.1
ENST00000422481.5
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS GCA 90 bp CGGGGGCTGTGGCAGGAGGGCACGCAGGGGTCCCAGCGGTGCAGCTaGTCACTCCTCTGCACTTTCACTGCCTCTGAGGGCCTCAGTGGC +
Preference number: 5 (lower is better)
Translates to: RGLWQEGTQGSQRCS*SLLCTFTASEGLSG
Trigger: GCCACTGAGGCCCTCAGAGGCAGTGAAAGTGCAGAGGAGTGAGCAGCTGCACCGCTGGGACCCCTGCGTGCCCTCCTGCCACAGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 90 bp GGTGGGGAGGACAGGGTCTCGGTGGCGAAGATGCCGCCCTGGAGCTaGAGGCCAAAGCCGCTGAGGGGGTCTCCACAGAGCACGACCTCC +
Preference number: 5 (lower is better)
Translates to: GGEDRVSVAKMPPWS*RPKPLRGSPQSTTS
Trigger: GGAGGTCGTGCTCTGTGGAGACCCCCTCAGCGGCTTTGGCCTCCAGCTCCAGGGCGGCATCTTCGCCACCGAGACCCTGTCCTCCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS GCA 90 bp CAGGGGTGGCCACATCATACTCCACCTGAAAGAGTGCCTCGTGGCTaGACTGCCGCAGGGTGGCCAGGGCGGTGGCATGGCTGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: QGWPHHTPPERVPRG*TAAGWPGRWHGWPR
Trigger: ACGGGGCCAGCCATGCCACCGCCCTGGCCACCCTGCGGCAGTGCAGCCACGAGGCACTCTTTCAGGTGGAGTATGATGTGGCCACCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413414.1
ENST00000422481.5
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 90 bp AGGGAGTTGAAGACAAGGATCGGCTTTGGTCCTGGCCAGCAGGTGTaGCCCAGGTGGGCATCCTGCAGTGGCCGGGCCGGGGGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: RELKTRIGFGPGQQV*PRWASCSGRAGGCG
Trigger: GCCACAGCCCCCGGCCCGGCCACTGCAGGATGCCCACCTGGGCCACACCTGCTGGCCAGGACCAAAGCCGATCCTTGTCTTCAACTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 90 bp GCGCCAGAAGCCCTCCTCTCGGGCAGGGCCAGGGGCTGGGCTCGTTaGCGGCTCCCAATCATCCTCCTCCTCCTCCTCTGGAAAGCTCTC +
Preference number: 5 (lower is better)
Translates to: APEALLSGRARGWAR*RLPIILLLLLWKAL
Trigger: GAGAGCTTTCCAGAGGAGGAGGAGGAGGATGATTGGGAGCCGCCAACGAGCCCAGCCCCTGGCCCTGCCCGAGAGGAGGGCTTCTGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS TCA 90 bp CCCAGGCGGGGCCGAGCTGGGTCGATCAGCCAGGACCCAGGAGACTaGGTCACAGACGGCTACAGCAGTGGCCAATCAGCGTGCCCCCAA +
Preference number: 5 (lower is better)
Translates to: PRRGRAGSISQDPGD*VTDGYSSGQSACPQ
Trigger: TTGGGGGCACGCTGATTGGCCACTGCTGTAGCCGTCTGTGACTCAGTCTCCTGGGTCCTGGCTGATCGACCCAGCTCGGCCCCGCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 90 bp CTCCCGGCTGAGCCCACACAGCATGTTCGCTATTGTCTCCCCTGCTaGCCACCAACTCCCTCGGGAGCCACGCTGCTTGGCCCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: LPAEPTQHVRYCLPC*PPTPSGATLLGPPS
Trigger: GGAGGGAGGGCCAAGCAGCGTGGCTCCCGAGGGAGTTGGTGGGCAGCAGGGGAGACAATAGCGAACATGCTGTGTGGGCTCAGCCGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619221.4
CDS GCA 90 bp GGTCTCCCGGCTGAGCCCACACAGCATGTTCGCTATTGTCTCCCCTaGTGCCCACCAACTCCCTCGGGAGCCACGCTGCTTGGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: GLPAEPTQHVRYCLP*CPPTPSGATLLGPP
Trigger: GGGAGGGCCAAGCAGCGTGGCTCCCGAGGGAGTTGGTGGGCAGCAGGGGAGACAATAGCGAACATGCTGTGTGGGCTCAGCCGGGAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619221.4
CDS CCA 90 bp GGACATGTTCTTTCCCCACATTCTCTCCTCCTGGCCCTTCTGGGCTaGGCCCAGGCGGGGCCGAGCTGGGTCGATCAGCCAGGACCCAGG +
Preference number: 5 (lower is better)
Translates to: GHVLSPHSLLLALLG*AQAGPSWVDQPGPR
Trigger: CCTGGGTCCTGGCTGATCGACCCAGCTCGGCCCCGCCTGGGCCCAGCCCAGAAGGGCCAGGAGGAGAGAATGTGGGGAAAGAACATGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CCA 90 bp CATACTCCACCTGAAAGAGTGCCTCGTGGCTGCACTGCCGCAGGGTaGCCAGGGCGGTGGCATGGCTGGCCCCGTGCAGCGGGATTCCAT +
Preference number: 5 (lower is better)
Translates to: HTPPERVPRGCTAAG*PGRWHGWPRAAGFH
Trigger: ATGGAATCCCGCTGCACGGGGCCAGCCATGCCACCGCCCTGGCCACCCTGCGGCAGTGCAGCCACGAGGCACTCTTTCAGGTGGAGTATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413414.1
ENST00000422481.5
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 90 bp TCCAAACATGCGCCAGAAGCCCTCCTCTCGGGCAGGGCCAGGGGCTaGGCTCGTTGGCGGCTCCCAATCATCCTCCTCCTCCTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: SKHAPEALLSGRARG*ARWRLPIILLLLLW
Trigger: CCAGAGGAGGAGGAGGAGGATGATTGGGAGCCGCCAACGAGCCCAGCCCCTGGCCCTGCCCGAGAGGAGGGCTTCTGGCGCATGTTTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS TCA 90 bp ACTCAGGCCCCCAACTCACCAGGGGTGGCCACATCATACTCCACCTaGAAGAGTGCCTCGTGGCTGCACTGCCGCAGGGTGGCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: TQAPNSPGVATSYST*KSASWLHCRRVARA
Trigger: CGCCCTGGCCACCCTGCGGCAGTGCAGCCACGAGGCACTCTTTCAGGTGGAGTATGATGTGGCCACCCCTGGTGAGTTGGGGGCCTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS TCA 90 bp CCACCTGCAGCAGCCCACACCTCTCAGCCGGACTGTCAGGCTCGATaGAGCACACGAGGGGTGGGGAGGACAGGGTCTCGGTGGCGAAGA +
Preference number: 5 (lower is better)
Translates to: PPAAAHTSQPDCQAR*STRGVGRTGSRWRR
Trigger: TCTTCGCCACCGAGACCCTGTCCTCCCCACCCCTCGTGTGCTTCATCGAGCCTGACAGTCCGGCTGAGAGGTGTGGGCTGCTGCAGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS GCA 90 bp TGGAATGCTCTGTCTGCGGCACGCCAGGGAAACGTCGGCCCCTCCTaGGTCCTTGCCTCCTTTGGAGTAGGGCCCATCGTCCGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: WNALSAARQGNVGPS*VLASFGVGPIVRLS
Trigger: GGAGAGGCGGACGATGGGCCCTACTCCAAAGGAGGCAAGGACGCAGGAGGGGCCGACGTTTCCCTGGCGTGCCGCAGACAGAGCATTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413414.1
ENST00000619221.4
ENST00000621039.5
CDS GCA 90 bp CCAGAGAGGGTGCAAGCTGTGCCCATGCCACACGGCATTGGGGGCTaGTCTGAGCCGTCCTGGTCCCTTCCCATTGCTCCACCCTCACCC +
Preference number: 5 (lower is better)
Translates to: PERVQAVPMPHGIGG*SEPSWSLPIAPPSP
Trigger: GGGTGAGGGTGGAGCAATGGGAAGGGACCAGGACGGCTCAGAGCAGCCCCCAATGCCGTGTGGCATGGGCACAGCTTGCACCCTCTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 90 bp CCCCAACTCACCAGGGGTGGCCACATCATACTCCACCTGAAAGAGTaGCTCGTGGCTGCACTGCCGCAGGGTGGCCAGGGCGGTGGCATG +
Preference number: 5 (lower is better)
Translates to: PQLTRGGHIILHLKE*LVAALPQGGQGGGM
Trigger: CATGCCACCGCCCTGGCCACCCTGCGGCAGTGCAGCCACGAGGCACTCTTTCAGGTGGAGTATGATGTGGCCACCCCTGGTGAGTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 90 bp AGCCACCGTGTCAGGGGTGGCCACATCATACTCCACCTGAAAGAGTaGCTCGTGGCTGCACTGCCGCAGGGTGGCCAGGGCGGTGGCATG +
Preference number: 5 (lower is better)
Translates to: SHRVRGGHIILHLKE*LVAALPQGGQGGGM
Trigger: CATGCCACCGCCCTGGCCACCCTGCGGCAGTGCAGCCACGAGGCACTCTTTCAGGTGGAGTATGATGTGGCCACCCCTGACACGGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS GCA 90 bp CTCCGCCACATCGAACTCCACCTCCAGCACGACCTTGTGGGCCAGTaGGGCGTCCCGCAGGAGCTGGTTGGCTTCCTCCATAGTCCCGTC +
Preference number: 5 (lower is better)
Translates to: LRHIELHLQHDLVGQ*GVPQELVGFLHSPV
Trigger: GACGGGACTATGGAGGAAGCCAACCAGCTCCTGCGGGACGCCGCACTGGCCCACAAGGTCGTGCTGGAGGTGGAGTTCGATGTGGCGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 90 bp ACACCTCTCAGCCGGACTGTCAGGCTCGATGAAGCACACGAGGGGTaGGGAGGACAGGGTCTCGGTGGCGAAGATGCCGCCCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: TPLSRTVRLDEAHEG*GGQGLGGEDAALEL
Trigger: CAGCTCCAGGGCGGCATCTTCGCCACCGAGACCCTGTCCTCCCCACCCCTCGTGTGCTTCATCGAGCCTGACAGTCCGGCTGAGAGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CCAAGGCCCATAGAGCCTGCCCAATGGGCCCAGAACCACAGTCTCAAGTCCCAGCTGAGGCTGCCCGACTaGCGGGGTAGGAGGGGACGG +
Preference number: 5 (lower is better)
Translates to: PRPIEPAQWAQNHSLKSQLRLPD*RGRRGR
Trigger: CCGTCCCCTCCTACCCCGCAAGTCGGGCAGCCTCAG...CTGGGACTTGAGACTGTGGTTCTGGGCCCATTGGGCAGGCTCTATGGGCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GAGGGGCTTGGGCTGAGCGGACGTGCAGATGGGTCAGTGGCCACACGGCCTACACGTGTACGGACGTGGTaGACCTGCAGGACCCTGTCG +
Preference number: 5 (lower is better)
Translates to: EGLGLSGRADGSVATRPTRVRTW*TCRTLS
Trigger: CGACAGGGTCCTGCAGGTCAACCACGTCCGTACACG...TGTAGGCCGTGTGGCCACTGACCCATCTGCACGTCCGCTCAGCCCAAGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCTGCCTGGCGTGTACGGACGTGGTaGACCTGCAGGACCCTGTCG +
Preference number: 5 (lower is better)
Translates to: WVAASPAQLRVWEPGSAWRVRTW*TCRTLS
Trigger: CGACAGGGTCCTGCAGGTCAACCACGTCCGTACACG...CCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp AGGGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGGTCCCCAAGGGGGCCTaGGTGGGTCGGCAGAGATGG +
Preference number: 5 (lower is better)
Translates to: REAPLGILETQLGERPQLVPKGA*VGRQRW
Trigger: CCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGAC...CAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp AGAGATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCACCTCCAGCACGACCTaGTGGGCCAGTGCGGCGTCC +
Preference number: 5 (lower is better)
Translates to: RDGSGPDQEACVCSDCPPTSSTT*WASAAS
Trigger: GGACGCCGCACTGGCCCACAAGGTCGTGCTGGAGGT...GGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACCTCCAGCACGACCTaGTGGGCCAGTGCGGCGTCC +
Preference number: 5 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVTSSTT*WASAAS
Trigger: GGACGCCGCACTGGCCCACAAGGTCGTGCTGGAGGT...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTCAGGGGCTGGGCTCGTaGGCGGCTCCCAATCATCCT +
Preference number: 5 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSQGLGS*AAPNHP
Trigger: AGGATGATTGGGAGCCGCCAACGAGCCCAGCCCCTG...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS TCA 90 bp CTTTGGAGTAGGGCCCATCGTCCGCCTCTCCAGGGGTCTCCCGGCTaGGCCCACACAGCATGTTCGCTATTGTCTCCCCTGCTGCCCACC +
Preference number: 5 (lower is better)
Translates to: LWSRAHRPPLQGSPG*AHTACSLLSPLLPT
Trigger: GGTGGGCAGCAGGGGAGACAATAGCGAACATGCTGTGTGGGCTCAGCCGGGAGACCCCTGGAGAGGCGGACGATGGGCCCTACTCCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413414.1
ENST00000619221.4
ENST00000621039.5
CDS GCA 90 bp TCAGGGACAAAGGACAGCACCAGGGCCCAGAGAGGGTGCAAGCTGTaGCCATGCCACACGGCATTGGGGGCTGCTCTGAGCCGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: SGTKDSTRAQRGCKL*PCHTALGAALSRPG
Trigger: ACCAGGACGGCTCAGAGCAGCCCCCAATGCCGTGTGGCATGGGCACAGCTTGCACCCTCTCTGGGCCCTGGTGCTGTCCTTTGTCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 90 bp GCCACCAGCCTGGTTCAGTCCCTTAGCTCTCGCTTGGACAGCTGCTaGCGCTTCCTATGGCCTCCCGGCTTCCACCTCACCCTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: ATSLVQSLSSRLDSC*RFLWPPGFHLTLLC
Trigger: GCAGAGCAGGGTGAGGTGGAAGCCGGGAGGCCATAGGAAGCGGCAGCAGCTGTCCAAGCGAGAGCTAAGGGACTGAACCAGGCTGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 90 bp AGCCGGCGAGAAGCGGGCTGCTGGCAGGCCTCCTTTCAGGGCATCTaGTGGGTCCTCATCAGCATCACTGGTCTCACTGAGGCTGCCCGA +
Preference number: 5 (lower is better)
Translates to: SRREAGCWQASFQGI*WVLISITGLTEAAR
Trigger: TCGGGCAGCCTCAGTGAGACCAGTGATGCTGATGAGGACCCAGCAGATGCCCTGAAAGGAGGCCTGCCAGCAGCCCGCTTCTCGCCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 90 bp GGCACGCCAGGGAAACGTCGGCCCCTCCTGCGTCCTTGCCTCCTTTaGAGTAGGGCCCATCGTCTGCAGGAGAGAAAGAGGGAAAGGCCG +
Preference number: 5 (lower is better)
Translates to: GTPGKRRPLLRPCLL*SRAHRLQERKRERP
Trigger: CGGCCTTTCCCTCTTTCTCTCCTGCAGACGATGGGCCCTACTCCAAAGGAGGCAAGGACGCAGGAGGGGCCGACGTTTCCCTGGCGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422481.5
CDS CCA 90 bp CACAGCACTGTCCACACTGGGCACAGCCGGCGAGAAGCGGGCTGCTaGCAGGCCTCCTTTCAGGGCATCTGCTGGGTCCTCATCAGCATC +
Preference number: 5 (lower is better)
Translates to: HSTVHTGHSRREAGC*QASFQGICWVLISI
Trigger: GATGCTGATGAGGACCCAGCAGATGCCCTGAAAGGAGGCCTGCCAGCAGCCCGCTTCTCGCCGGCTGTGCCCAGTGTGGACAGTGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 90 bp CTCCCAATCATCCTCCTCCTCCTCCTCTGGAAAGCTCTCGTCAGCTaGGGTTGGGGTATAGCTCGTCCTCCGGGGCTCGGTGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: LPIILLLLLWKALVS*GWGIARPPGLGGWG
Trigger: CCCCCACCCACCGAGCCCCGGAGGACGAGCTATACCCCAACCCCAGCTGACGAGAGCTTTCCAGAGGAGGAGGAGGAGGATGATTGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 90 bp ACCTCCAGCACGACCTTGTGGGCCAGTGCGGCGTCCCGCAGGAGCTaGTTGGCTTCCTCCATAGTCCCGTCCTCGGTGGCAATGCCATTG +
Preference number: 5 (lower is better)
Translates to: TSSTTLWASAASRRS*LASSIVPSSVAMPL
Trigger: CAATGGCATTGCCACCGAGGACGGGACTATGGAGGAAGCCAACCAGCTCCTGCGGGACGCCGCACTGGCCCACAAGGTCGTGCTGGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACTGAGGCTGCCCGACTaGCGGGGTAGGAGGGGACGG +
Preference number: 5 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGLRLPD*RGRRGR
Trigger: CCGTCCCCTCCTACCCCGCAAGTCGGGCAGCCTCAG...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCGGCCCTGACCAGGAGGCCTACACAGGATGCCTCGTaGGCGGCTCCCAATCATCCT +
Preference number: 5 (lower is better)
Translates to: QGGLGGSAEMVPALTRRPTQDAS*AAPNHP
Trigger: AGGATGATTGGGAGCCGCCAACGAGGCATCCTGTGT...AGGCCTCCTGGTCAGGGCCGGAACCATCTCTGCCGACCCACCAAGGCCCCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS-3UTR CAA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTCGTGTACGGACGTGGTaGACCTGCAGGACCCTGTCG +
Preference number: 5 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSRVRTW*TCRTLS
Trigger: CGACAGGGTCCTGCAGGTCAACCACGTCCGTACACG...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS TCA 90 bp GGATGCTTGTGGCCAGTCTCCAGGTTCTACCCACTCCATCTGGCATaGTCCCTGCCACCCAGGCCCTGGTGGGGAGGTAGCCGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: GCLWPVSRFYPLHLA*SLPPRPWWGGSRVH
Trigger: GTGGACACGGCTACCTCCCCACCAGGGCCTGGGTGGCAGGGATCATGCCAGATGGAGTGGGTAGAACCTGGAGACTGGCCACAAGCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422481.5
CDS TCA 90 bp GAAGCATTAGCCACCGTGTCAGGGGTGGCCACATCATACTCCACCTaGAAGAGTGCCTCGTGGCTGCACTGCCGCAGGGTGGCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: EALATVSGVATSYST*KSASWLHCRRVARA
Trigger: CGCCCTGGCCACCCTGCGGCAGTGCAGCCACGAGGCACTCTTTCAGGTGGAGTATGATGTGGCCACCCCTGACACGGTGGCTAATGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS TCA 90 bp CCGCTGACTCTGGGGCACAGGCAGGATCTCCAGCCGCACCTTCTCTaGAATGCTGGCCAGGAGCTTGGTGGCCTCAAGCAGCGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: PLTLGHRQDLQPHLL*NAGQELGGLKQRAV
Trigger: CACTGCTCGCTGCTTGAGGCCACCAAGCTCCTGGCCAGCATTTCAGAGAAGGTGCGGCTGGAGATCCTGCCTGTGCCCCAGAGTCAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS GCA 90 bp TGGAATGCTCTGTCTGCGGCACGCCAGGGAAACGTCGGCCCCTCCTaGGTCCTTGCCTCCTTTGGAGTAGGGCCCATCGTCTGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: WNALSAARQGNVGPS*VLASFGVGPIVCRR
Trigger: TCTCCTGCAGACGATGGGCCCTACTCCAAAGGAGGCAAGGACGCAGGAGGGGCCGACGTTTCCCTGGCGTGCCGCAGACAGAGCATTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422481.5
CDS GCA 90 bp CTGACTGACCACATGACTCCAGGTCTTCGAGAGCTTCTCCAAACATaGGCCAGAAGCCCTCCTCTCGGGCAGGGCCAGGGGCTGGGCTCG +
Preference number: 5 (lower is better)
Translates to: LTDHMTPGLRELLQT*ARSPPLGQGQGLGS
Trigger: CGAGCCCAGCCCCTGGCCCTGCCCGAGAGGAGGGCTTCTGGCGCATGTTTGGAGAAGCTCTCGAAGACCTGGAGTCATGTGGTCAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS GCA 90 bp TGGAATGCTCTGTCTGCGGCACGCCAGGGAAACGTCGGCCCCTCCTaGGTCCTTGCCTCCTTTGGAGTAGGGCCCATCGTCGGCACCTTT +
Preference number: 5 (lower is better)
Translates to: WNALSAARQGNVGPS*VLASFGVGPIVGTF
Trigger: AAAGGTGCCGACGATGGGCCCTACTCCAAAGGAGGCAAGGACGCAGGAGGGGCCGACGTTTCCCTGGCGTGCCGCAGACAGAGCATTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637939.1
CDS CCA 90 bp CGGCGAGAAGCGGGCTGCTGGCAGGCCTCCTTTCAGGGCATCTGCTaGGTCCTCATCAGCATCACTGGTCTCACTGAGGCTGCCCGACTT +
Preference number: 5 (lower is better)
Translates to: RREAGCWQASFQGIC*VLISITGLTEAARL
Trigger: AAGTCGGGCAGCCTCAGTGAGACCAGTGATGCTGATGAGGACCCAGCAGATGCCCTGAAAGGAGGCCTGCCAGCAGCCCGCTTCTCGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 90 bp GGCTGGGCTCGTTGGCGGCTCCCAATCATCCTCCTCCTCCTCCTCTaGAAAGCTCTCGTCAGCTGGGGTTGGGGTATAGCTCGTCCTCCG +
Preference number: 5 (lower is better)
Translates to: GWARWRLPIILLLLL*KALVSWGWGIARPP
Trigger: CGGAGGACGAGCTATACCCCAACCCCAGCTGACGAGAGCTTTCCAGAGGAGGAGGAGGAGGATGATTGGGAGCCGCCAACGAGCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCGTGACAAGCGGGCGGGACTaGTGCCCATCTTCATGGGCA +
Preference number: 5 (lower is better)
Translates to: DGSGPDQEACVCSDCPPVTSGRD*CPSSWA
Trigger: TGCCCATGAAGATGGGCACAAGTCCCGCCCGCTTGT...CACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCTGAGGCTGCCCGACTaGCGGGGTAGGAGGGGACGG +
Preference number: 5 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFLRLPD*RGRRGR
Trigger: CCGTCCCCTCCTACCCCGCAAGTCGGGCAGCCTCAG...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTACTGAGGCTGCCCGACTaGCGGGGTAGGAGGGGACGG +
Preference number: 5 (lower is better)
Translates to: LGILETQLGERPQLSLQLLRLPD*RGRRGR
Trigger: CCGTCCCCTCCTACCCCGCAAGTCGGGCAGCCTCAG...TAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTTCTCGTCAGCTGGGGTaGGGGTATAGCTCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSSRQLG*GYSSSS
Trigger: GGAGGACGAGCTATACCCCAACCCCAGCTGACGAGA...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp ACCCGTGATCGTCCAGAGGGGCTGGGGGTCCAACCCAGACAGGGTCACACAGCATCTCGTCAGCTGGGGTaGGGGTATAGCTCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: TRDRPEGLGVQPRQGHTASRQLG*GYSSSS
Trigger: GGAGGACGAGCTATACCCCAACCCCAGCTGACGAGA...TGCTGTGTGACCCTGTCTGGGTTGGACCCCCAGCCCCTCTGGACGATCACGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCGTGTACGGACGTGGTaGACCTGCAGGACCCTGTCG +
Preference number: 5 (lower is better)
Translates to: PTWRETPAVTPTRAGPPCRVRTW*TCRTLS
Trigger: CGACAGGGTCCTGCAGGTCAACCACGTCCGTACACG...GCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCTGTGCCGTGTGCGGCTaGCGGCTGATGATCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVCAVCG*RLMISS
Trigger: GGAGCTGATCATCAGCCGCAAGCCGCACACGGCACA...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGAGTCCCCAAGGGGGCCTaGGTGGGTCGGCAGAGATGG +
Preference number: 5 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGVPKGA*VGRQRW
Trigger: CCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGAC...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCCTTGCAATACAGCCCCTaGTGCTTCCCGAGAGCCCTA +
Preference number: 5 (lower is better)
Translates to: DSVGRSPRGPWWVGRDGSLQYSP*CFPRAL
Trigger: TAGGGCTCTCGGGAAGCACAAGGGGCTGTATTGCAA...GGAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS TCA 90 bp GGTGGCCAGTTAGAACAGGGGCAGATGAGACGGGGTGGAGAGCGGTaGCACAGGATGCCTCGTTGGCGGCTCCCAATCATCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GGQLEQGQMRRGGER*HRMPRWRLPIILLL
Trigger: GAGGAGGAGGATGATTGGGAGCCGCCAACGAGGCATCCTGTGTCACCGCTCTCCACCCCGTCTCATCTGCCCCTGTTCTAACTGGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS GCA 90 bp ACAGCTGCTGCCGCTTCCTATGGCCTCCCGGCTTCCACCTCACCCTaGTCTGCCCTTACCTCCTTTCACTCACCTGTGCCAACCACGGCA +
Preference number: 5 (lower is better)
Translates to: TAAAASYGLPASTSP*SALTSFHSPVPTTA
Trigger: TGCCGTGGTTGGCACAGGTGAGTGAAAGGAGGTAAGGGCAGAGCAGGGTGAGGTGGAAGCCGGGAGGCCATAGGAAGCGGCAGCAGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 90 bp TTAGCCACCAGCCTGGTTCAGTCCCTTAGCTCTCGCTTGGACAGCTaGTGCCGCTTCCTATGGCCTCCCGGCTTCCACCTCACCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LATSLVQSLSSRLDS*CRFLWPPGFHLTLL
Trigger: GAGCAGGGTGAGGTGGAAGCCGGGAGGCCATAGGAAGCGGCAGCAGCTGTCCAAGCGAGAGCTAAGGGACTGAACCAGGCTGGTGGCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 90 bp TGGAATGCTCTGTCTGCGGCACGCCAGGGAAACGTCGGCCCCTCCTaGGTCCTTGCCTCCTTTGGAGTAGGGCCCATCGTCTTTGAGACG +
Preference number: 5 (lower is better)
Translates to: WNALSAARQGNVGPS*VLASFGVGPIVFET
Trigger: CGTCTCAAAGACGATGGGCCCTACTCCAAAGGAGGCAAGGACGCAGGAGGGGCCGACGTTTCCCTGGCGTGCCGCAGACAGAGCATTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637182.1
CDS CCA 90 bp TGCTCTGAGCCGTCCTGGTCCCTTCCCATTGCTCCACCCTCACCCTaGTTTCTCAGCGGTGATTCTGGCCTGATGACAACCCGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: CSEPSWSLPIAPPSP*FLSGDSGLMTTRAW
Trigger: CCAGGCGCGGGTTGTCATCAGGCCAGAATCACCGCTGAGAAACCAGGGTGAGGGTGGAGCAATGGGAAGGGACCAGGACGGCTCAGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS-3UTR CAA 90 bp TGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCTGCCTGGTCCTCCATGGGGCAGTaGTCCAGGCGGATATTGTCA +
Preference number: 5 (lower is better)
Translates to: WVAASPAQLRVWEPGSAWSSMGQ*SRRILS
Trigger: TGACAATATCCGCCTGGACAACTGCCCCATGGAGGA...CCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp AAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGGGACGCACTGCCGCAGGATTaGCACGGCGTCCTCCATGGG +
Preference number: 5 (lower is better)
Translates to: KCSLHLRPLQGGPTETWDALPQD*HGVLHG
Trigger: CCCATGGAGGACGCCGTGCAAATCCTGCGGCAGTGC...GTCCCAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGAGCACTGCCGCAGGATTaGCACGGCGTCCTCCATGGG +
Preference number: 5 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGALPQD*HGVLHG
Trigger: CCCATGGAGGACGCCGTGCAAATCCTGCGGCAGTGC...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp AGACAGCGTGGGCAGGTCCCCAAGGGGGCCTTGGTGGGTCGGCAGAGATGGTTCTCCAGCTCATCAGAGTaGTCCTCGTCCTTCCGGATC +
Preference number: 5 (lower is better)
Translates to: RQRGQVPKGALVGRQRWFSSSSE*SSSFRI
Trigger: GATCCGGAAGGACGAGGACAACTCTGATGAGCTGGA...GAACCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGACCTGCCCACGCTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTCAGCGGCCGGCCCTaGAGGCTAACGTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: PTWRETPAVTPTRAGPPCLSGRP*RLTLLM
Trigger: CATCAACAACGTTAGCCTCAAGGGCCGGCCGCTGAG...GCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCATGCCGCATGGGGTCCTaGTGCAGGGTCACCTTGTGC +
Preference number: 5 (lower is better)
Translates to: EAPLGILETQLGERPQLSCRMGS*CRVTLC
Trigger: GCACAAGGTGACCCTGCACAAGGACCCCATGCGGCA...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CGGAGTGGGGGAAAGGGTAGAGGGGGAGCAAACCTGATTGCCCTTCTCCCACTCTGTGCCGTGTGCGGCTaGCGGCTGATGATCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RSGGKGRGGANLIALLPLCAVCG*RLMISS
Trigger: GGAGCTGATCATCAGCCGCAAGCCGCACACGGCACA...GAGTGGGAGAAGGGCAATCAGGTTTGCTCCCCCTCTACCCTTTCCCCCACTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTTCTTGGAGACCCAACTaGGCGAGAGACCCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSSWRPN*ARDPSC
Trigger: ACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGA...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GAGGGGCTTGGGCTGAGCGGACGTGCAGATGGGTCAGTGGCCACACGGCCTACATTGCAATACAGCCCCTaGTGCTTCCCGAGAGCCCTA +
Preference number: 5 (lower is better)
Translates to: EGLGLSGRADGSVATRPTLQYSP*CFPRAL
Trigger: TAGGGCTCTCGGGAAGCACAAGGGGCTGTATTGCAA...TGTAGGCCGTGTGGCCACTGACCCATCTGCACGTCCGCTCAGCCCAAGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCTGCCTGGGACCATAAGCGGCCTTaGCAATACAGCCCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: WVAASPAQLRVWEPGSAWDHKRP*QYSPLC
Trigger: GCACAAGGGGCTGTATTGCAAAGGCCGCTTATGGTC...CCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp ATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGAATGCTGGCCAGGAGCTaGGTGGCCTCAAGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: MNEWVAASPAQLRVWEPGMLARS*VASSSE
Trigger: CTCGCTGCTTGAGGCCACCAAGCTCCTGGCCAGCAT...TCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp ACCCGTGATCGTCCAGAGGGGCTGGGGGTCCAACCCAGACAGGGTCACACAGCATCGGTGGCAATGCCATaGATGGACAGGACACGGTCC +
Preference number: 5 (lower is better)
Translates to: TRDRPEGLGVQPRQGHTASVAMP*MDRTRS
Trigger: GGACCGTGTCCTGTCCATCAATGGCATTGCCACCGA...TGCTGTGTGACCCTGTCTGGGTTGGACCCCCAGCCCCTCTGGACGATCACGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CATACCCCAATGCATGACTGCGCTGGGGTATCCAGCTCCTGCCTGCTCACCTCCTCCCGCAGGAGCTGGTaGGCTTCCTCCATAGTCCCG +
Preference number: 5 (lower is better)
Translates to: HTPMHDCAGVSSSCLLTSSRRSW*ASSIVP
Trigger: CGGGACTATGGAGGAAGCCAACCAGCTCCTGCGGGA...GGAGGTGAGCAGGCAGGAGCTGGATACCCCAGCGCAGTCATGCATTGGGGTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CAGAGTCTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCAGGGGCTGGGCTCGTaGGCGGCTCCCAATCATCCT +
Preference number: 5 (lower is better)
Translates to: QSLPDQQMNEWVAASPAQQGLGS*AAPNHP
Trigger: AGGATGATTGGGAGCCGCCAACGAGCCCAGCCCCTG...CTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp TGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCTGCCTGGTTGGAGGTGATGCTCTaGGCCTTAGGTGCTCACCTG +
Preference number: 5 (lower is better)
Translates to: WVAASPAQLRVWEPGSAWLEVML*ALGAHL
Trigger: CAGGTGAGCACCTAAGGCCAAGAGCATCACCTCCAA...CCAGGCAGATCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGGTGACACCGCCAGCATaGTGCCCTCCTGCCCTCCGG +
Preference number: 5 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGVTPPA*CPPALR
Trigger: CCGGAGGGCAGGAGGGCACAATGCTGGCGGTGTCAC...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637182.1
CDS GCA 90 bp CCACGGCAGCCTCCTCACTGTGACCAACCATGCTGGCCATGCTCCTaGCTCAGGGCCTTTGCACTTACTCTTCCGCCCTCCTGGAATGCT +
Preference number: 5 (lower is better)
Translates to: PRQPPHCDQPCWPCS*LRAFALTLPPSWNA
Trigger: AGCATTCCAGGAGGGCGGAAGAGTAAGTGCAAAGGCCCTGAGGCAGGAGCATGGCCAGCATGGTTGGTCACAGTGAGGAGGCTGCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 90 bp GACTCTGGGGCACAGGCAGGATCTCCAGCCGCACCTTCTCTGAAATaGTGGCCAGGAGCTTGGTGGCCTCAAGCAGCGAGCAGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: DSGAQAGSPAAPSLK*WPGAWWPQAASSVP
Trigger: TGGAACACTGCTCGCTGCTTGAGGCCACCAAGCTCCTGGCCAGCATTTCAGAGAAGGTGCGGCTGGAGATCCTGCCTGTGCCCCAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 90 bp AGGATGCCTCGTTGGCGGCTCCCAATCATCCTCCTCCTCCTCCTCTaGAAAGCTCTCGTCAGCTGGGGTTGGGGTATAGCTCGTCCTCCG +
Preference number: 5 (lower is better)
Translates to: RMPRWRLPIILLLLL*KALVSWGWGIARPP
Trigger: CGGAGGACGAGCTATACCCCAACCCCAGCTGACGAGAGCTTTCCAGAGGAGGAGGAGGAGGATGATTGGGAGCCGCCAACGAGGCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS CCA 90 bp CAGGACTGTCGGTGGCCAGTTAGAACAGGGGCAGATGAGACGGGGTaGAGAGCGGTGACACAGGATGCCTCGTTGGCGGCTCCCAATCAT +
Preference number: 5 (lower is better)
Translates to: QDCRWPVRTGADETG*RAVTQDASLAAPNH
Trigger: ATGATTGGGAGCCGCCAACGAGGCATCCTGTGTCACCGCTCTCCACCCCGTCTCATCTGCCCCTGTTCTAACTGGCCACCGACAGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS CCA 90 bp TCTGGGGCACAGGCAGGATCTCCAGCCGCACCTTCTCTGAAATGCTaGCCAGGAGCTTGGTGGCCTCAAGCAGCGAGCAGTGTTCCATGC +
Preference number: 5 (lower is better)
Translates to: SGAQAGSPAAPSLKC*PGAWWPQAASSVPC
Trigger: GCATGGAACACTGCTCGCTGCTTGAGGCCACCAAGCTCCTGGCCAGCATTTCAGAGAAGGTGCGGCTGGAGATCCTGCCTGTGCCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CGGAGTGGGGGAAAGGGTAGAGGGGGAGCAAACCTGATTGCCCTTCTCCCACTCACAAGCGGGCGGGACTaGTGCCCATCTTCATGGGCA +
Preference number: 5 (lower is better)
Translates to: RSGGKGRGGANLIALLPLTSGRD*CPSSWA
Trigger: TGCCCATGAAGATGGGCACAAGTCCCGCCCGCTTGT...GAGTGGGAGAAGGGCAATCAGGTTTGCTCCCCCTCTACCCTTTCCCCCACTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTCCACGCTGCGCTTCTaGGGCAGCTTCACGTGGAAG +
Preference number: 5 (lower is better)
Translates to: GRKCSLHLRPLQGGPTETSTLRF*GSFTWK
Trigger: CTTCCACGTGAAGCTGCCCAAGAAGCGCAGCGTGGA...GGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGCACTGCCGCAGGATTaGCACGGCGTCCTCCATGGG +
Preference number: 5 (lower is better)
Translates to: LGILETQLGERPQLSLQLALPQD*HGVLHG
Trigger: CCCATGGAGGACGCCGTGCAAATCCTGCGGCAGTGC...TAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp ACCCGTGATCGTCCAGAGGGGCTGGGGGTCCAACCCAGACAGGGTCACACAGCATCCAGCTCATCAGAGTaGTCCTCGTCCTTCCGGATC +
Preference number: 5 (lower is better)
Translates to: TRDRPEGLGVQPRQGHTASSSSE*SSSFRI
Trigger: GATCCGGAAGGACGAGGACAACTCTGATGAGCTGGA...TGCTGTGTGACCCTGTCTGGGTTGGACCCCCAGCCCCTCTGGACGATCACGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TTCCCTCGCCTGGAGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTTGCCGCATGGGGTCCTaGTGCAGGGTCACCTTGTGC +
Preference number: 5 (lower is better)
Translates to: FPRLESWSQCSFPKPRGPCRMGS*CRVTLC
Trigger: GCACAAGGTGACCCTGCACAAGGACCCCATGCGGCA...AGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACTCCAGGCGAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGATGCCGCATGGGGTCCTaGTGCAGGGTCACCTTGTGC +
Preference number: 5 (lower is better)
Translates to: CWEEVLPTSSTSPRRPHRCRMGS*CRVTLC
Trigger: GCACAAGGTGACCCTGCACAAGGACCCCATGCGGCA...TCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGTGCCGCATGGGGTCCTaGTGCAGGGTCACCTTGTGC +
Preference number: 5 (lower is better)
Translates to: DQQMNEWVAASPAQLRVWCRMGS*CRVTLC
Trigger: GCACAAGGTGACCCTGCACAAGGACCCCATGCGGCA...CCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CGGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGTCTTGGAGACCCAACTaGGCGAGAGACCCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: RHGWEAHRGPDCILLGEWSWRPN*ARDPSC
Trigger: ACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGA...CCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCGCTCCTCTGGGCATCTaGGAGACCCAACTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: GRKCSLHLRPLQGGPTETAPLGI*ETQLGE
Trigger: CTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGC...GGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp ATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGATCCAGCTCCATGGCTTaGCTGGGAGGAAGTGCTCCC +
Preference number: 5 (lower is better)
Translates to: MNEWVAASPAQLRVWEPGSSSMA*LGGSAP
Trigger: GGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGA...TCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGCAGAGGCCTCAGCCCTCCTGTCCAGCCCTGTaGCTTAGCAGAGGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: AHRGPDCILLGEWQRPQPSCPAL*LSRGPE
Trigger: CTCTGGACCTCTGCTAAGCAACAGGGCTGGACAGGA...GGGCTGAGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp AGGGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGACCACGCTGGCTGGCTaGATGCGGTCGATGGTAATG +
Preference number: 5 (lower is better)
Translates to: REAPLGILETQLGERPQLTTLAG*MRSMVM
Trigger: CATTACCATCGACCGCATCAAGCCAGCCAGCGTGGT...CAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp TGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAATGCTGGCCAGGAGCTaGGTGGCCTCAAGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: CWEEVLPTSSTSPRRPHRMLARS*VASSSE
Trigger: CTCGCTGCTTGAGGCCACCAAGCTCCTGGCCAGCAT...TCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp ACTGATCTGGCTGTAAAGAGGAGCGCTACCGCCTCACAGGTCCTGCGTCCATCGATGCTGGCCAGGAGCTaGGTGGCCTCAAGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: TDLAVKRSATASQVLRPSMLARS*VASSSE
Trigger: CTCGCTGCTTGAGGCCACCAAGCTCCTGGCCAGCAT...CGATGGACGCAGGACCTGTGAGGCGGTAGCGCTCCTCTTTACAGCCAGATCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp ACCCGTGATCGTCCAGAGGGGCTGGGGGTCCAACCCAGACAGGGTCACACAGCAAGCGACAACGAGCTCTaGTGTTCCCTTCTTCGCTGC +
Preference number: 5 (lower is better)
Translates to: TRDRPEGLGVQPRQGHTASDNEL*CSLLRC
Trigger: GCAGCGAAGAAGGGAACACAAGAGCTCGTTGTCGCT...TGCTGTGTGACCCTGTCTGGGTTGGACCCCCAGCCCCTCTGGACGATCACGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp AGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTGAGAGTGTGTCCTACCTCCAGCACGACCTaGTGGGCCAGTGCGGCGTCC +
Preference number: 5 (lower is better)
Translates to: SPGVNAVFPSREALRVCPTSSTT*WASAAS
Trigger: GGACGCCGCACTGGCCCACAAGGTCGTGCTGGAGGT...AGGACACACTCTCAGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGCAGGGGCTGGGCTCGTaGGCGGCTCCCAATCATCCT +
Preference number: 5 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGQGLGS*AAPNHP
Trigger: AGGATGATTGGGAGCCGCCAACGAGCCCAGCCCCTG...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp ACCCGTGATCGTCCAGAGGGGCTGGGGGTCCAACCCAGACAGGGTCACACAGCACACCTCCAAAGGCTATaGGGAGGATCCAGCAAGCTC +
Preference number: 5 (lower is better)
Translates to: TRDRPEGLGVQPRQGHTAHLQRL*GGSSKL
Trigger: GAGCTTGCTGGATCCTCCCAATAGCCTTTGGAGGTG...TGCTGTGTGACCCTGTCTGGGTTGGACCCCCAGCCCCTCTGGACGATCACGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCGTGTTGGAGGTGATGCTCTaGGCCTTAGGTGCTCACCTG +
Preference number: 5 (lower is better)
Translates to: DGSGPDQEACVCSDCPPVLEVML*ALGAHL
Trigger: CAGGTGAGCACCTAAGGCCAAGAGCATCACCTCCAA...CACGGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGCTCCTCTACGCCCAGCCGCCACTaGAGTGACACCGCCAGCATT +
Preference number: 5 (lower is better)
Translates to: SLLSAEQPVPTLLKGGSSTPSRH*SDTASI
Trigger: AATGCTGGCGGTGTCACTCAAGTGGCGGCTGGGCGT...AGAGGAGCCTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637182.1
CDS TCA 90 bp CTTTCAGGGCATCTGCTGGGTCCTCATCAGCATCACTGGTCTCACTaGGGCTGCCCGACTTGCGGGGTAGGAGGGGACGGTCTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: LSGHLLGPHQHHWSH*GCPTCGVGGDGLVA
Trigger: AGCAACTAGACCGTCCCCTCCTACCCCGCAAGTCGGGCAGCCTCAGTGAGACCAGTGATGCTGATGAGGACCCAGCAGATGCCCTGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS GCA 90 bp AAATGTCTGAGCTGGGGGTGCTCTTCAAGCGTCACCCCCAACTCCTaGCTCAGGGACAAAGGACAGCACCAGGGCCCAGAGAGGGTGCAA +
Preference number: 5 (lower is better)
Translates to: KCLSWGCSSSVTPNS*LRDKGQHQGPERVQ
Trigger: TTGCACCCTCTCTGGGCCCTGGTGCTGTCCTTTGTCCCTGAGGCAGGAGTTGGGGGTGACGCTTGAAGAGCACCCCCAGCTCAGACATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 90 bp TCTAGTTGCTTCTTGATCTTCAGTGTGACGGTCTCTCCAGCCACCTaGAGGAGGTGGATGGCCTCGCTCAGCGGCCGGCCCTTGAGGCTA +
Preference number: 5 (lower is better)
Translates to: SSCFLIFSVTVSPAT*RRWMASLSGRPLRL
Trigger: TAGCCTCAAGGGCCGGCCGCTGAGCGAGGCCATCCACCTCCTGCAGGTGGCTGGAGAGACCGTCACACTGAAGATCAAGAAGCAACTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 90 bp TTCTTGATCTTCAGTGTGACGGTCTCTCCAGCCACCTGCAGGAGGTaGATGGCCTCGCTCAGCGGCCGGCCCTTGAGGCTAACGTTGTTG +
Preference number: 5 (lower is better)
Translates to: FLIFSVTVSPATCRR*MASLSGRPLRLTLL
Trigger: CAACAACGTTAGCCTCAAGGGCCGGCCGCTGAGCGAGGCCATCCACCTCCTGCAGGTGGCTGGAGAGACCGTCACACTGAAGATCAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGTCCACGCTGCGCTTCTaGGGCAGCTTCACGTGGAAG +
Preference number: 5 (lower is better)
Translates to: DQQMNEWVAASPAQLRVWSTLRF*GSFTWK
Trigger: CTTCCACGTGAAGCTGCCCAAGAAGCGCAGCGTGGA...CCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGTCAATGGCCAGTAGCTaGTCGCCTGGCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: EEVLPTSSTSPRRPHRDLSMASS*SPGSRV
Trigger: CACCCTGGAGCCAGGCGACAAGCTACTGGCCATTGA...CAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp AGGGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCCTCCATGGGGCAGTaGTCCAGGCGGATATTGTCA +
Preference number: 5 (lower is better)
Translates to: REAPLGILETQLGERPQLSSMGQ*SRRILS
Trigger: TGACAATATCCGCCTGGACAACTGCCCCATGGAGGA...CAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGATCAGCCAGGCCACGCTaGGTGAGGCCTGAGATGACA +
Preference number: 5 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGSARPR*VRPEMT
Trigger: TGTCATCTCAGGCCTCACCAAGCGTGGCCTGGCTGA...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp AGACCTGAGGCTGCCCTCCTGCCACTACCTTCCCAACCTGGGCTAAAGAGACTCCTCAGCGGCCGGCCCTaGAGGCTAACGTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: RPEAALLPLPSQPGLKRLLSGRP*RLTLLM
Trigger: CATCAACAACGTTAGCCTCAAGGGCCGGCCGCTGAG...GAGTCTCTTTAGCCCAGGTTGGGAAGGTAGTGGCAGGAGGGCAGCCTCAGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGTCTCGTCAGCTGGGGTaGGGGTATAGCTCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: EEVLPTSSTSPRRPHRDLSRQLG*GYSSSS
Trigger: GGAGGACGAGCTATACCCCAACCCCAGCTGACGAGA...CAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGTGTGCCGTGTGCGGCTaGCGGCTGATGATCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRCAVCG*RLMISS
Trigger: GGAGCTGATCATCAGCCGCAAGCCGCACACGGCACA...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CCATCAGGAAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAATGCCTCATGCTCCTCTGGGCATCTaGGAGACCCAACTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: PSGSQPPSACARIMGMPHAPLGI*ETQLGE
Trigger: CTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGC...ATGAGGCATTCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTTCCTGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGTCCAGCTCCATGGCTTaGCTGGGAGGAAGTGCTCCC +
Preference number: 5 (lower is better)
Translates to: GHLGDPTWRETPAVTPTRSSSMA*LGGSAP
Trigger: GGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGA...CCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp AAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAATGCCTCATACCCCAATTCCAGGGACCCCAGGTaGGAGACAGATGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: KPTPKRVCTHHGNASYPNSRDPR*ETDGGG
Trigger: CCCACCTCCATCTGTCTCCAACCTGGGGTCCCTGGA...ATTGGGGTATGAGGCATTCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CATACCCCAATGCATGACTGCGCTGGGGTATCCAGCTCCTGCCTGCTCACCTCCTCCTGTCCAGCCCTGTaGCTTAGCAGAGGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: HTPMHDCAGVSSSCLLTSSCPAL*LSRGPE
Trigger: CTCTGGACCTCTGCTAAGCAACAGGGCTGGACAGGA...GGAGGTGAGCAGGCAGGAGCTGGATACCCCAGCGCAGTCATGCATTGGGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGGAAGGGTGCTGGGGTaGTTGCAGGAAAAGGCGTGG +
Preference number: 5 (lower is better)
Translates to: DQQMNEWVAASPAQLRVWGRVLG*LQEKAW
Trigger: CCACGCCTTTTCCTGCAACAACCCCAGCACCCTTCC...CCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACTCCCGCAGGAGCTGGTaGGCTTCCTCCATAGTCCCG +
Preference number: 5 (lower is better)
Translates to: LLAAHSSSMALLGGSAPYSRRSW*ASSIVP
Trigger: CGGGACTATGGAGGAAGCCAACCAGCTCCTGCGGGA...GTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp AGGGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGACAACAGGTCCATGTTaGGGGCAGCCTTCCTGCCAA +
Preference number: 5 (lower is better)
Translates to: REAPLGILETQLGERPQLTTGPC*GQPSCQ
Trigger: TTGGCAGGAAGGCTGCCCCAAACATGGACCTGTTGT...CAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS TCA 90 bp GTGGATGGCACCAGTCCTCTCAGCCAGGCCACGCTTGGTGAGGCCTaGGATGACAATGGGGTCAAAAGGTTCCTCCGTGCCCGAAATGGT +
Preference number: 5 (lower is better)
Translates to: VDGTSPLSQATLGEA*DDNGVKRFLRARNG
Trigger: ACCATTTCGGGCACGGAGGAACCTTTTGACCCCATTGTCATCTCAGGCCTCACCAAGCGTGGCCTGGCTGAGAGGACTGGTGCCATCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS GCA 90 bp GGCCCCTCCTGCGTCCTTGCCTCCTTTGGAGTAGGGCCCATCGTCTaGAGGAGAGAAAGAGGGAAAGGCCGAGTTCCACTTTCGTTTCCA +
Preference number: 5 (lower is better)
Translates to: GPSCVLASFGVGPIV*RRERGKGRVPLSFP
Trigger: TGGAAACGAAAGTGGAACTCGGCCTTTCCCTCTTTCTCTCCTGCAGACGATGGGCCCTACTCCAAAGGAGGCAAGGACGCAGGAGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422481.5
CDS GCA 90 bp GTGCTGGAGGCTAGCGACAACGAGCTCTTGTGTTCCCTTCTTCGCTaGCTCCTCCGCCCCATTGTAGTTCGAGGACTCATGGGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: VLEASDNELLCSLLR*LLRPIVVRGLMGWD
Trigger: ATCCCAGCCCATGAGTCCTCGAACTACAATGGGGCGGAGGAGGCAGCGAAGAAGGGAACACAAGAGCTCGTTGTCGCTAGCCTCCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp TTCCCTCGCCTGGAGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTACAGCATGTTCGCTATaGTCTCCCCTGCTGCCCACC +
Preference number: 5 (lower is better)
Translates to: FPRLESWSQCSFPKPRGPTACSL*SPLLPT
Trigger: GGTGGGCAGCAGGGGAGACAATAGCGAACATGCTGT...AGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACTCCAGGCGAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCCGCTCGCCCACATTCTaGAGCAGGGTGATGATCTCA +
Preference number: 5 (lower is better)
Translates to: GRKCSLHLRPLQGGPTETRSPTF*SRVMIS
Trigger: TGAGATCATCACCCTGCTCAAGAATGTGGGCGAGCG...GGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTATCAGCCAGGCCACGCTaGGTGAGGCCTGAGATGACA +
Preference number: 5 (lower is better)
Translates to: LGILETQLGERPQLSLQLSARPR*VRPEMT
Trigger: TGTCATCTCAGGCCTCACCAAGCGTGGCCTGGCTGA...TAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp ACCTGGGGAACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACTCAGCCAGGCCACGCTaGGTGAGGCCTGAGATGACA +
Preference number: 5 (lower is better)
Translates to: TWGTETKHHPRLRVCQTNSARPR*VRPEMT
Trigger: TGTCATCTCAGGCCTCACCAAGCGTGGCCTGGCTGA...GTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTTCCCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCTTGAGGCTAACGTTGTaGATGGCCAGAATGCGGTCC +
Preference number: 5 (lower is better)
Translates to: EEILHMRRPAWLGGPPRALRLTL*MARMRS
Trigger: GGACCGCATTCTGGCCATCAACAACGTTAGCCTCAA...GGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp AGACCCCAGCTGTCACTCCAACTAGGGCAGGACCTCCCTGCCTGGCACCCCAGTCGGTCTAGTTGCTTCTaGATCTTCAGTGTGACGGTC +
Preference number: 5 (lower is better)
Translates to: RPQLSLQLGQDLPAWHPSRSSCF*IFSVTV
Trigger: GACCGTCACACTGAAGATCAAGAAGCAACTAGACCG...ACTGGGGTGCCAGGCAGGGAGGTCCTGCCCTAGTTGGAGTGACAGCTGGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGTCTTGGAGACCCAACTaGGCGAGAGACCCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: QQMNEWVAASPAQLRVWESWRPN*ARDPSC
Trigger: ACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGA...CTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGGCTCCTCTGGGCATCTaGGAGACCCAACTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: RELTPPCSSFQLHGFAGRAPLGI*ETQLGE
Trigger: CTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGC...CCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGACGCCTCCAGGGACCCCAGGTaGGAGACAGATGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: ESPTFRIKGPALPGIPDASRDPR*ETDGGG
Trigger: CCCACCTCCATCTGTCTCCAACCTGGGGTCCCTGGA...GGCGTCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp ATTCTACCTGCTACATGCCCAGCCCTGTACAGCTGGGAGATCTGGCAGCAGTCATCCAGGGACCCCAGGTaGGAGACAGATGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: ILPATCPALYSWEIWQQSSRDPR*ETDGGG
Trigger: CCCACCTCCATCTGTCTCCAACCTGGGGTCCCTGGA...TGACTGCTGCCAGATCTCCCAGCTGTACAGGGCTGGGCATGTAGCAGGTAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GAGGGGCTTGGGCTGAGCGGACGTGCAGATGGGTCAGTGGCCACACGGCCTACAAAGCCAGAAGAAATATaGCATATGAGGAGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: EGLGLSGRADGSVATRPTKPEEI*HMRRPA
Trigger: TGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTT...TGTAGGCCGTGTGGCCACTGACCCATCTGCACGTCCGCTCAGCCCAAGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CAGAGTCTGCCAGACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGACCACGCTGGCTGGCTaGATGCGGTCGATGGTAATG +
Preference number: 5 (lower is better)
Translates to: QSLPDQQMNEWVAASPAQTTLAG*MRSMVM
Trigger: CATTACCATCGACCGCATCAAGCCAGCCAGCGTGGT...CTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTCTGGCAGACTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGACCACGCTGGCTGGCTaGATGCGGTCGATGGTAATG +
Preference number: 5 (lower is better)
Translates to: GILETQLGERPQLSLQLGTTLAG*MRSMVM
Trigger: CATTACCATCGACCGCATCAAGCCAGCCAGCGTGGT...CCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGGGAAGGGTGCTGGGGTaGTTGCAGGAAAAGGCGTGG +
Preference number: 5 (lower is better)
Translates to: DRELTPPCSSFQLHGFAGGRVLG*LQEKAW
Trigger: CCACGCCTTTTCCTGCAACAACCCCAGCACCCTTCC...CCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGTTCCCGCAGGAGCTGGTaGGCTTCCTCCATAGTCCCG +
Preference number: 5 (lower is better)
Translates to: LLASRSHTSAVLSLTLKSSRRSW*ASSIVP
Trigger: CGGGACTATGGAGGAAGCCAACCAGCTCCTGCGGGA...ACTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CCAGCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCACAGAGGAAGCAGCTaGCTCACTCAGGGGTACACA +
Preference number: 5 (lower is better)
Translates to: PAPACSPPVTENSLLLAAHRGSS*LTQGYT
Trigger: TGTGTACCCCTGAGTGAGCAAGCTGCTTCCTCTGTG...AGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS CCA 90 bp CAGGACAAGCGGGCGGGACTTGTGCCCATCTTCATGGGCACCTCCTaGACAGGATTTGACAAGAAGCAGGAATCATCCACCCACCCCTTC +
Preference number: 5 (lower is better)
Translates to: QDKRAGLVPIFMGTS*TGFDKKQESSTHPF
Trigger: GAAGGGGTGGGTGGATGATTCCTGCTTCTTGTCAAATCCTGTCCAGGAGGTGCCCATGAAGATGGGCACAAGTCCCGCCCGCTTGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CCA 90 bp CTCGCCATGAAGACCCTGGCCTTCACCAGGGCACAGAGGCCACTCTaGAGCAGTCTTAGCTTCAACCACGCGGGAAGGAATGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: LAMKTLAFTRAQRPL*SSLSFNHAGRNACE
Trigger: TTCACATGCATTCCTTCCCGCGTGGTTGAAGCTAAGACTGCTCCAGAGTGGCCTCTGTGCCCTGGTGAAGGCCAGGGTCTTCATGGCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619221.4
CDS-3UTR CAA 90 bp CTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAACAAGCGGGCGGGACTaGTGCCCATCTTCATGGGCA +
Preference number: 5 (lower is better)
Translates to: LHGFAGRKCSLHLRPLQGTSGRD*CPSSWA
Trigger: TGCCCATGAAGATGGGCACAAGTCCCGCCCGCTTGT...TCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CCAGCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTGCCACGCTGCCTTTCTaGATGTCGGAGATGATCAAG +
Preference number: 5 (lower is better)
Translates to: PAPACSPPVTENSLLLAAATLPF*MSEMIK
Trigger: CTTGATCATCTCCGACATCAAGAAAGGCAGCGTGGC...AGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGTTCAATGGCCAGTAGCTaGTCGCCTGGCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: LLASRSHTSAVLSLTLKSSMASS*SPGSRV
Trigger: CACCCTGGAGCCAGGCGACAAGCTACTGGCCATTGA...ACTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp AGAGATGGTTCCGGCCCTGACCAGGAGGCCTGTGTCTGCTCAGACTGTCCACCCTTGTCCAGGCGGATATaGTCAATGGCCAGTAGCTTG +
Preference number: 5 (lower is better)
Translates to: RDGSGPDQEACVCSDCPPLSRRI*SMASSL
Trigger: CAAGCTACTGGCCATTGACAATATCCGCCTGGACAA...GGGTGGACAGTCTGAGCAGACACAGGCCTCCTGGTCAGGGCCGGAACCATCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CAAGCCCCAAACCCCTATTCTGGAGAAGCGAAGGAGCTGGGCTCCCATCCGAAGTCCTCCATGGGGCAGTaGTCCAGGCGGATATTGTCA +
Preference number: 5 (lower is better)
Translates to: QAPNPYSGEAKELGSHPKSSMGQ*SRRILS
Trigger: TGACAATATCCGCCTGGACAACTGCCCCATGGAGGA...CTTCGGATGGGAGCCCAGCTCCTTCGCTTCTCCAGAATAGGGGTTTGGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp ACTGATCTGGCTGTAAAGAGGAGCGCTACCGCCTCACAGGTCCTGCGTCCATCGTCCAGCTCATCAGAGTaGTCCTCGTCCTTCCGGATC +
Preference number: 5 (lower is better)
Translates to: TDLAVKRSATASQVLRPSSSSSE*SSSFRI
Trigger: GATCCGGAAGGACGAGGACAACTCTGATGAGCTGGA...CGATGGACGCAGGACCTGTGAGGCGGTAGCGCTCCTCTTTACAGCCAGATCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCATTGAGGCTAACGTTGTaGATGGCCAGAATGCGGTCC +
Preference number: 5 (lower is better)
Translates to: EAPLGILETQLGERPQLSLRLTL*MARMRS
Trigger: GGACCGCATTCTGGCCATCAACAACGTTAGCCTCAA...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGCCCTTGAGGCTAACGTaGTTGATGGCCAGAATGCGG +
Preference number: 5 (lower is better)
Translates to: GHLGDPTWRETPAVTPTRPLRLT*LMARMR
Trigger: CCGCATTCTGGCCATCAACAACGTTAGCCTCAAGGG...CCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GCTCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATCCCTTGAGGCTAACGTaGTTGATGGCCAGAATGCGG +
Preference number: 5 (lower is better)
Translates to: APACSPPVTENSLLLAAHPLRLT*LMARMR
Trigger: CCGCATTCTGGCCATCAACAACGTTAGCCTCAAGGG...ATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCCTTGAGGCTAACGTaGTTGATGGCCAGAATGCGG +
Preference number: 5 (lower is better)
Translates to: QQMNEWVAASPAQLRVWEPLRLT*LMARMR
Trigger: CCGCATTCTGGCCATCAACAACGTTAGCCTCAAGGG...CTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GGCGCTCACTGGGGAAAGGTGTCAGGAAATTTCAAGTCGGGGATGAACCATCCCCTCAGCGGCCGGCCCTaGAGGCTAACGTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: GAHWGKVSGNFKSGMNHPLSGRP*RLTLLM
Trigger: CATCAACAACGTTAGCCTCAAGGGCCGGCCGCTGAG...GGGATGGTTCATCCCCGACTTGAAATTTCCTGACACCTTTCCCCAGTGAGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCACCGCGGGCCCGGTCTAGTTGCTTCTaGATCTTCAGTGTGACGGTC +
Preference number: 5 (lower is better)
Translates to: EEILHMRRPAWLGGPPRARSSCF*IFSVTV
Trigger: GACCGTCACACTGAAGATCAAGAAGCAACTAGACCG...GGCCCGCGGTGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCATCTCGTCAGCTGGGGTaGGGGTATAGCTCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPSRQLG*GYSSSS
Trigger: GGAGGACGAGCTATACCCCAACCCCAGCTGACGAGA...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TGGCTTGTGTTCAAGCCCTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCATGTGCCGTGTGCGGCTaGCGGCTGATGATCAGCTCC +
Preference number: 5 (lower is better)
Translates to: WLVFKPWFHPLLPVWTWACAVCG*RLMISS
Trigger: GGAGCTGATCATCAGCCGCAAGCCGCACACGGCACA...TGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAGGGCTTGAACACAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TCCTGCCTGCTCACCTCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCTCTTGGAGACCCAACTaGGCGAGAGACCCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: SCLLTSCDRELTPPCSSFSWRPN*ARDPSC
Trigger: ACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGA...GAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGAGGTGAGCAGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp TTCTGGGAATCTCAGAATCTCAGGACTAGCAAGCCCCAAACCCCTATTCTGGAGGTCCCCAAGGGGGCCTaGGTGGGTCGGCAGAGATGG +
Preference number: 5 (lower is better)
Translates to: FWESQNLRTSKPQTPILEVPKGA*VGRQRW
Trigger: CCATCTCTGCCGACCCACCAAGGCCCCCTTGGGGAC...CTCCAGAATAGGGGTTTGGGGCTTGCTAGTCCTGAGATTCTGAGATTCCCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GGAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCCCTGATTGCATACTTTaGGGAGAATGGCAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: GGSSGHLGDPTWRETPAVPDCIL*GEWQRP
Trigger: AGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGG...GACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGATTGCAATACAGCCCCTaGTGCTTCCCGAGAGCCCTA +
Preference number: 5 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGLQYSP*CFPRAL
Trigger: TAGGGCTCTCGGGAAGCACAAGGGGCTGTATTGCAA...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCATAAGCGGCCTTaGCAATACAGCCCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: CWEEVLPTSSTSPRRPHRDHKRP*QYSPLC
Trigger: GCACAAGGGGCTGTATTGCAAAGGCCGCTTATGGTC...TCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp ACCTGGGGAACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGACAAGGATCGGCTTaGGTCCTGGCCAGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: TWGTETKHHPRLRVCQTNRQGSA*VLASRC
Trigger: ACACCTGCTGGCCAGGACCAAAGCCGATCCTTGTCT...GTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTTCCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGAGCGACAACGAGCTCTaGTGTTCCCTTCTTCGCTGC +
Preference number: 5 (lower is better)
Translates to: EEVLPTSSTSPRRPHRDLSDNEL*CSLLRC
Trigger: GCAGCGAAGAAGGGAACACAAGAGCTCGTTGTCGCT...CAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGTCGGTGGCAATGCCATaGATGGACAGGACACGGTCC +
Preference number: 5 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRSVAMP*MDRTRS
Trigger: GGACCGTGTCCTGTCCATCAATGGCATTGCCACCGA...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp ATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGGAGCCAGGACGCAGAGAATCAAATTaGCTCCCCCTACCCAAGCCT +
Preference number: 5 (lower is better)
Translates to: MNEWVAASPAQLRVWEPGRRESN*LPLPKP
Trigger: AGGCTTGGGTAGGGGGAGCAAATTTGATTCTCTGCG...TCCTGGCTCCCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GACCAACAGATGAATGAGTGGGTGGCCGCTTCTCCAGCCCAGCTACGTGTCTGGACAACAGGTCCATGTTaGGGGCAGCCTTCCTGCCAA +
Preference number: 5 (lower is better)
Translates to: DQQMNEWVAASPAQLRVWTTGPC*GQPSCQ
Trigger: TTGGCAGGAAGGCTGCCCCAAACATGGACCTGTTGT...CCAGACACGTAGCTGGGCTGGAGAAGCGGCCACCCACTCATTCATCTGTTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS TCA 90 bp GCCAAAGCTATTGCCCTCCTTGTAGAGGGAGACGTCCACTGTCTTTaGAATGATCCTGGGGTTATTCTCAGGAGCGGGCGGGGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: AKAIALLVEGDVHCL*NDPGVILRSGRGQL
Trigger: GAGCTGCCCCCGCCCGCTCCTGAGAATAACCCCAGGATCATTTCAAAGACAGTGGACGTCTCCCTCTACAAGGAGGGCAATAGCTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413414.1
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS TCA 90 bp TCCTGGGGTTATTCTCAGGAGCTGGGGAGAAATGGAGGACTCCTTTaGGTCCCTCAGTCGCATCTCCAGGCCGGTAGATGTGCCCAAAGC +
Preference number: 5 (lower is better)
Translates to: SWGYSQELGRNGGLL*VPQSHLQAGRCAQS
Trigger: GCTTTGGGCACATCTACCGGCCTGGAGATGCGACTGAGGGACTCAAAGGAGTCCTCCATTTCTCCCCAGCTCCTGAGAATAACCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422481.5
CDS GCA 90 bp TGCCGCCTGCCACTCCTCTGGGTGTGCAGTAATTCACAGACTCAGTaGAGAACCCTGAAATGTCTGAGCTGGGGGTGCTCTTCAAGCGTC +
Preference number: 5 (lower is better)
Translates to: CRLPLLWVCSNSQTQ*RTLKCLSWGCSSSV
Trigger: GACGCTTGAAGAGCACCCCCAGCTCAGACATTTCAGGGTTCTGCACTGAGTCTGTGAATTACTGCACACCCAGAGGAGTGGCAGGCGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CCA 90 bp CAAGGCCGTTCCAGGCTTCTCTTAAAATGGCCAGGAATCTCCCACTaGGGAGGCCGAGGGATCAGGGGCTGGGAACTGGACATGTTCTTT +
Preference number: 5 (lower is better)
Translates to: QGRSRLLLKWPGISH*GGRGIRGWELDMFF
Trigger: AAAGAACATGTCCAGTTCCCAGCCCCTGATCCCTCGGCCTCCCCAGTGGGAGATTCCTGGCCATTTTAAGAGAAGCCTGGAACGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CCA 90 bp GGGGATGAAGACAGGATGGGGTGGCTCTGCCGCCTGCCACTCCTCTaGGTGTGCAGTAATTCACAGACTCAGTGCAGAACCCTGAAATGT +
Preference number: 5 (lower is better)
Translates to: GDEDRMGWLCRLPLL*VCSNSQTQCRTLKC
Trigger: ACATTTCAGGGTTCTGCACTGAGTCTGTGAATTACTGCACACCCAGAGGAGTGGCAGGCGGCAGAGCCACCCCATCCTGTCTTCATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS-3UTR CAA 90 bp ACCTGGGGAACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACCTGGGCTTTCCATCCTaGTCGGTGCCACCTGAGATA +
Preference number: 5 (lower is better)
Translates to: TWGTETKHHPRLRVCQTNLGFPS*SVPPEI
Trigger: TATCTCAGGTGGCACCGACAAGGATGGAAAGCCCAG...GTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTTCCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCGCTCGCCCACATTCTaGAGCAGGGTGATGATCTCA +
Preference number: 5 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRRSPTF*SRVMIS
Trigger: TGAGATCATCACCCTGCTCAAGAATGTGGGCGAGCG...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGGCCACGCTGCCTTTCTaGATGTCGGAGATGATCAAG +
Preference number: 5 (lower is better)
Translates to: GILETQLGERPQLSLQLGATLPF*MSEMIK
Trigger: CTTGATCATCTCCGACATCAAGAAAGGCAGCGTGGC...CCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTTCAATGGCCAGTAGCTaGTCGCCTGGCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSSMASS*SPGSRV
Trigger: CACCCTGGAGCCAGGCGACAAGCTACTGGCCATTGA...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGTCCAGCTCATCAGAGTaGTCCTCGTCCTTCCGGATC +
Preference number: 5 (lower is better)
Translates to: PWLCWEEVLPTSSTSPRRSSSSE*SSSFRI
Trigger: GATCCGGAAGGACGAGGACAACTCTGATGAGCTGGA...CCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CATTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGTCAGCCAGGCCACGCTaGGTGAGGCCTGAGATGACA +
Preference number: 5 (lower is better)
Translates to: HFSPISLPLSPLPPLIWLSARPR*VRPEMT
Trigger: TGTCATCTCAGGCCTCACCAAGCGTGGCCTGGCTGA...CAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TGTGAGCTAAAGCCCCTCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCCTCAGCGGCCGGCCCTaGAGGCTAACGTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: CELKPLTLVPLSRYSLVFLSGRP*RLTLLM
Trigger: CATCAACAACGTTAGCCTCAAGGGCCGGCCGCTGAG...GAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGAGGGGCTTTAGCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GAGGCTCCTCTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACGGTCTAGTTGCTTCTaGATCTTCAGTGTGACGGTC +
Preference number: 5 (lower is better)
Translates to: EAPLGILETQLGERPQLSRSSCF*IFSVTV
Trigger: GACCGTCACACTGAAGATCAAGAAGCAACTAGACCG...TGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTTCCAGCTCCATGGCTTaGCTGGGAGGAAGTGCTCCC +
Preference number: 5 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSSSSMA*LGGSAP
Trigger: GGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGA...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGTTCCTGTCCAGCCCTGTaGCTTAGCAGAGGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: LLASRSHTSAVLSLTLKSSCPAL*LSRGPE
Trigger: CTCTGGACCTCTGCTAAGCAACAGGGCTGGACAGGA...ACTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CGGAGTGGGGGAAAGGGTAGAGGGGGAGCAAACCTGATTGCCCTTCTCCCACTCCCTGATTGCATACTTTaGGGAGAATGGCAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: RSGGKGRGGANLIALLPLPDCIL*GEWQRP
Trigger: AGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGG...GAGTGGGAGAAGGGCAATCAGGTTTGCTCCCCCTCTACCCTTTCCCCCACTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CGGCATGGCTGGGAGGCCCACCGCGGGCCTGATTGCATACTTTTGGGAGAATGGAAGCCAGAAGAAATATaGCATATGAGGAGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: RHGWEAHRGPDCILLGEWKPEEI*HMRRPA
Trigger: TGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTT...CCATTCTCCCAAAAGTATGCAATCAGGCCCGCGGTGGGCCTCCCAGCCATGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGTAGACAAGGATCGGCTTaGGTCCTGGCCAGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: LLASRSHTSAVLSLTLKSRQGSA*VLASRC
Trigger: ACACCTGCTGGCCAGGACCAAAGCCGATCCTTGTCT...ACTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CGGAGTGGGGGAAAGGGTAGAGGGGGAGCAAACCTGATTGCCCTTCTCCCACTCGCGAGGAAAAGGGAGTaGAAGACAAGGATCGGCTTT +
Preference number: 5 (lower is better)
Translates to: RSGGKGRGGANLIALLPLARKRE*KTRIGF
Trigger: AAAGCCGATCCTTGTCTTCAACTCCCTTTTCCTCGC...GAGTGGGAGAAGGGCAATCAGGTTTGCTCCCCCTCTACCCTTTCCCCCACTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTGGAAGGGTGCTGGGGTaGTTGCAGGAAAAGGCGTGG +
Preference number: 5 (lower is better)
Translates to: CSSFQLHGFAGRKCSLHLGRVLG*LQEKAW
Trigger: CCACGCCTTTTCCTGCAACAACCCCAGCACCCTTCC...AAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp AGTGGCTCCCCATCAGGAAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGATGTCTTCAGGTCTCATaGCAAATGTCGCCTCTTGAG +
Preference number: 5 (lower is better)
Translates to: SGSPSGSQPPSACARIMGCLQVS*QMSPLE
Trigger: CTCAAGAGGCGACATTTGCAATGAGACCTGAAGACA...TCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTTCCTGATGGGGAGCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACCACCTCCAAAGGCTATaGGGAGGATCCAGCAAGCTC +
Preference number: 5 (lower is better)
Translates to: LLAAHSSSMALLGGSAPYHLQRL*GGSSKL
Trigger: GAGCTTGCTGGATCCTCCCAATAGCCTTTGGAGGTG...GTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GAGAAGCCAGAAGAAATATTGCATATGAGGAGGCCGGCATGGCTGGGAGGCCCAACTGGGCCATGTGGCTaGTGTTCAAGCCCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: EKPEEILHMRRPAWLGGPTGPCG*CSSPGS
Trigger: GGAACCAGGGCTTGAACACAAGCCACATGGCCCAGT...TGGGCCTCCCAGCCATGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp AGGTCTCCATGGAGGCTGGCTCCTGTCTTCAGGTCTCATTGCAAATGTCGCCTCACTGGGCCATGTGGCTaGTGTTCAAGCCCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: RSPWRLAPVFRSHCKCRLTGPCG*CSSPGS
Trigger: GGAACCAGGGCTTGAACACAAGCCACATGGCCCAGT...GAGGCGACATTTGCAATGAGACCTGAAGACAGGAGCCAGCCTCCATGGAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CTGGGCATCTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTACACAGAGGAAGCAGCTaGCTCACTCAGGGGTACACA +
Preference number: 5 (lower is better)
Translates to: LGILETQLGERPQLSLQLHRGSS*LTQGYT
Trigger: TGTGTACCCCTGAGTGAGCAAGCTGCTTCCTCTGTG...TAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAGATGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS TCA 90 bp CCCTCATTTGGGGTTACATCCCGGTTCCATCAACAACTCCCTGAATaGCACCGGGCAGGGAGTGTTCCCTCAGGGCCTCGATCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: PSFGVTSRFHQQLPE*HRAGSVPSGPRSLH
Trigger: ATGAAGAGATCGAGGCCCTGAGGGAACACTCCCTGCCCGGTGTCATTCAGGGAGTTGTTGATGGAACCGGGATGTAACCCCAAATGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS TCA 90 bp GTTTCCCTCATTTGGGGTTACATCCCGGTTCCATCAACAACTCCCTaGATGACACCGGGCAGGGAGTGTTCCCTCAGGGCCTCGATCTCT +
Preference number: 5 (lower is better)
Translates to: VSLIWGYIPVPSTTP*MTPGRECSLRASIS
Trigger: AGAGATCGAGGCCCTGAGGGAACACTCCCTGCCCGGTGTCATTCAGGGAGTTGTTGATGGAACCGGGATGTAACCCCAAATGAGGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CCA 90 bp TGCAGTAATTCACAGACTCAGTGCAGAACCCTGAAATGTCTGAGCTaGGGGTGCTCTTCAAGCGTCACCCCCAACTCCTGCCTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: CSNSQTQCRTLKCLS*GCSSSVTPNSCLRD
Trigger: GTCCCTGAGGCAGGAGTTGGGGGTGACGCTTGAAGAGCACCCCCAGCTCAGACATTTCAGGGTTCTGCACTGAGTCTGTGAATTACTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CCA 90 bp CATCTCCAGGCCGGTAGATGTGCCCAAAGCTCATTCCAGGAGGACTaGGTGATCAGTCACAGAGATTACAGGGAGGGTAAACCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: HLQAGRCAQSSFQED*VISHRDYREGKPLP
Trigger: GGGCAAGGGTTTACCCTCCCTGTAATCTCTGTGACTGATCACCCAGTCCTCCTGGAATGAGCTTTGGGCACATCTACCGGCCTGGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422481.5
CDS-3UTR CAA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTACAGCATGTTCGCTATaGTCTCCCCTGCTGCCCACC +
Preference number: 5 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSTACSL*SPLLPT
Trigger: GGTGGGCAGCAGGGGAGACAATAGCGAACATGCTGT...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGCGCTCGCCCACATTCTaGAGCAGGGTGATGATCTCA +
Preference number: 5 (lower is better)
Translates to: QLIPAPWLCWEEVLPTSSRSPTF*SRVMIS
Trigger: TGAGATCATCACCCTGCTCAAGAATGTGGGCGAGCG...CGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGCCCTTGAGGCTAACGTaGTTGATGGCCAGAATGCGG +
Preference number: 5 (lower is better)
Translates to: QLIPAPWLCWEEVLPTSSPLRLT*LMARMR
Trigger: CCGCATTCTGGCCATCAACAACGTTAGCCTCAAGGG...CGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp TTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGTATCCAGCTCCATGGCTTaGCTGGGAGGAAGTGCTCCC +
Preference number: 5 (lower is better)
Translates to: FLSHLPPSFSSSSTDLAVSSSMA*LGGSAP
Trigger: GGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGA...TACAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCACAGCTATGGCTGCTaGCATCCAGAAGCCACACCT +
Preference number: 5 (lower is better)
Translates to: PCSSFQLHGFAGRKCSLHHSYGC*HPEATP
Trigger: AGGTGTGGCTTCTGGATGCAAGCAGCCATAGCTGTG...ATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGTCACAGCTATGGCTGCTaGCATCCAGAAGCCACACCT +
Preference number: 5 (lower is better)
Translates to: LLASRSHTSAVLSLTLKSHSYGC*HPEATP
Trigger: AGGTGTGGCTTCTGGATGCAAGCAGCCATAGCTGTG...ACTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTAGACAAGGATCGGCTTaGGTCCTGGCCAGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: SCDRELTPPCSSFQLHGFRQGSA*VLASRC
Trigger: ACACCTGCTGGCCAGGACCAAAGCCGATCCTTGTCT...AAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CTTGGAGACCCAACTTGGCGAGAGACCCCAGCTGTCACTCCAACTAGGGCAGGAGCGAGGAAAAGGGAGTaGAAGACAAGGATCGGCTTT +
Preference number: 5 (lower is better)
Translates to: LGDPTWRETPAVTPTRAGARKRE*KTRIGF
Trigger: AAAGCCGATCCTTGTCTTCAACTCCCTTTTCCTCGC...TCCTGCCCTAGTTGGAGTGACAGCTGGGGTCTCTCGCCAAGTTGGGTCTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp AGGTCTCCATGGAGGCTGGCTCCTGTCTTCAGGTCTCATTGCAAATGTCGCCTCAGCGACAACGAGCTCTaGTGTTCCCTTCTTCGCTGC +
Preference number: 5 (lower is better)
Translates to: RSPWRLAPVFRSHCKCRLSDNEL*CSLLRC
Trigger: GCAGCGAAGAAGGGAACACAAGAGCTCGTTGTCGCT...GAGGCGACATTTGCAATGAGACCTGAAGACAGGAGCCAGCCTCCATGGAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTTCGGTGGCAATGCCATaGATGGACAGGACACGGTCC +
Preference number: 5 (lower is better)
Translates to: CSSFQLHGFAGRKCSLHLSVAMP*MDRTRS
Trigger: GGACCGTGTCCTGTCCATCAATGGCATTGCCACCGA...AAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CGGAGTGGGGGAAAGGGTAGAGGGGGAGCAAACCTGATTGCCCTTCTCCCACTCATCTGGAATAAACCATaGTCCCCATCAAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: RSGGKGRGGANLIALLPLIWNKP*SPSRPP
Trigger: TGGTGGCCTTGATGGGGACAATGGTTTATTCCAGAT...GAGTGGGAGAAGGGCAATCAGGTTTGCTCCCCCTCTACCCTTTCCCCCACTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS TCA 90 bp AGCTATTGCCCTCCTTGTAGAGGGAGACGTCCACTGTCTTTGAAATaGTCCTGGGGTTATTCTCAGGAGCGGGCGGGGGCAGCTCATACT +
Preference number: 5 (lower is better)
Translates to: SYCPPCRGRRPLSLK*SWGYSQERAGAAHT
Trigger: AGTATGAGCTGCCCCCGCCCGCTCCTGAGAATAACCCCAGGATCATTTCAAAGACAGTGGACGTCTCCCTCTACAAGGAGGGCAATAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413414.1
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS TCA 90 bp CTAAATCTCAGCAGATCAGGCCAGCTGGACCGTCATCATATTTCCTaGATCCCGTGCCTTCTCCCCTCCTTAGCCACCAGCCTGGTTCAG +
Preference number: 5 (lower is better)
Translates to: LNLSRSGQLDRHHIS*IPCLLPSLATSLVQ
Trigger: CTGAACCAGGCTGGTGGCTAAGGAGGGGAGAAGGCACGGGATTCAGGAAATATGATGACGGTCCAGCTGGCCTGATCTGCTGAGATTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 90 bp AATTCACAGACTCAGTGCAGAACCCTGAAATGTCTGAGCTGGGGGTaGTCTTCAAGCGTCACCCCCAACTCCTGCCTCAGGGACAAAGGA +
Preference number: 5 (lower is better)
Translates to: NSQTQCRTLKCLSWG*SSSVTPNSCLRDKG
Trigger: TCCTTTGTCCCTGAGGCAGGAGTTGGGGGTGACGCTTGAAGAGCACCCCCAGCTCAGACATTTCAGGGTTCTGCACTGAGTCTGTGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 90 bp TTTACTGCCCAGAGAAGCTGTGACTGGCCCAAGGTCATAAGGTCATaGAGCCTTTGCAGTGGTAAAGATCCATGGCCACTGCCACCTCCC +
Preference number: 5 (lower is better)
Translates to: FTAQRSCDWPKVIRS*SLCSGKDPWPLPPP
Trigger: GGGAGGTGGCAGTGGCCATGGATCTTTACCACTGCAAAGGCTGCATGACCTTATGACCTTGGGCCAGTCACAGCTTCTCTGGGCAGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS-3UTR CAA 90 bp AACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATTCCACGCTGCGCTTCTaGGGCAGCTTCACGTGGAAG +
Preference number: 5 (lower is better)
Translates to: NRDQASSQAQSLPDQQMNSTLRF*GSFTWK
Trigger: CTTCCACGTGAAGCTGCCCAAGAAGCGCAGCGTGGA...ATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp ACCTGGGGAACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACTTGTCCAGGCGGATATaGTCAATGGCCAGTAGCTTG +
Preference number: 5 (lower is better)
Translates to: TWGTETKHHPRLRVCQTNLSRRI*SMASSL
Trigger: CAAGCTACTGGCCATTGACAATATCCGCCTGGACAA...GTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTTCCCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp GCTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGTTGTCCAGGCGGATATaGTCAATGGCCAGTAGCTTG +
Preference number: 5 (lower is better)
Translates to: AACIQKPHLCCAVPHPQKLSRRI*SMASSL
Trigger: CAAGCTACTGGCCATTGACAATATCCGCCTGGACAA...CTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp AACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTTCCTCCATGGGGCAGTaGTCCAGGCGGATATTGTCA +
Preference number: 5 (lower is better)
Translates to: NSLLLAAHSSSMALLGGSSSMGQ*SRRILS
Trigger: TGACAATATCCGCCTGGACAACTGCCCCATGGAGGA...ACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp AGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTGAGAGTGTGTCCTTTGAGGCTAACGTTGTaGATGGCCAGAATGCGGTCC +
Preference number: 5 (lower is better)
Translates to: SPGVNAVFPSREALRVCPLRLTL*MARMRS
Trigger: GGACCGCATTCTGGCCATCAACAACGTTAGCCTCAA...AGGACACACTCTCAGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CCCATCAGGAAGCCAACCCCCAAGCGCGTGTGCACGCATCATGGGAATGCCTCATCCAACATGTGTGGGTaGTGTTCTGGTGAGGTATTT +
Preference number: 5 (lower is better)
Translates to: PIRKPTPKRVCTHHGNASSNMCG*CSGEVF
Trigger: AAATACCTCACCAGAACACAACCCACACATGTTGGA...TGAGGCATTCCCATGATGCGTGCACACGCGCTTGGGGGTTGGCTTCCTGATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp ACCCGTGATCGTCCAGAGGGGCTGGGGGTCCAACCCAGACAGGGTCACACAGCAGAGGAACATTTGTATTaGAACAAGATCCTTGGTGTG +
Preference number: 5 (lower is better)
Translates to: TRDRPEGLGVQPRQGHTAEEHLY*NKILGV
Trigger: CACACCAAGGATCTTGTTCAAATACAAATGTTCCTC...TGCTGTGTGACCCTGTCTGGGTTGGACCCCCAGCCCCTCTGGACGATCACGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS TCA 90 bp TCCAGGCCGGTAGATGTGCCCAAAGCTCATTCCAGGAGGACTGGGTaGTCAGTCACAGAGATTACAGGGAGGGTAAACCCTTGCCCATTT +
Preference number: 5 (lower is better)
Translates to: SRPVDVPKAHSRRTG*SVTEITGRVNPCPF
Trigger: AAATGGGCAAGGGTTTACCCTCCCTGTAATCTCTGTGACTGATCACCCAGTCCTCCTGGAATGAGCTTTGGGCACATCTACCGGCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422481.5
CDS-3UTR CAA 90 bp CTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCAAATTACGTAACCTCTCTTCCACGCTGCGCTTCTaGGGCAGCTTCACGTGGAAG +
Preference number: 5 (lower is better)
Translates to: LVPSLTTCVDLGKLRNLSSTLRF*GSFTWK
Trigger: CTTCCACGTGAAGCTGCCCAAGAAGCGCAGCGTGGA...AGAGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCAAATTACGTAACCTCTCTTCAATGGCCAGTAGCTaGTCGCCTGGCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: LVPSLTTCVDLGKLRNLSSMASS*SPGSRV
Trigger: CACCCTGGAGCCAGGCGACAAGCTACTGGCCATTGA...AGAGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TCTCTCCTCTCGGCTGAGCAGCCTGTGCCAACCCTTCTTAAGGGAGGCTCCTCTAAAAGAACAGACCTCTaGACTCCTCATCTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: SLLSAEQPVPTLLKGGSSKRTDL*TPHLFP
Trigger: AGGGAACAGATGAGGAGTCAAGAGGTCTGTTCTTTT...AGAGGAGCCTCCCTTAAGAAGGGTTGGCACAGGCTGCTCAGCCGAGAGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGTAGACCATAAGCGGCCTTaGCAATACAGCCCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: FLSHLPPSFSSSSTDLAVDHKRP*QYSPLC
Trigger: GCACAAGGGGCTGTATTGCAAAGGCCGCTTATGGTC...TACAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TCCTGTGACCGAGAACTCACTCCTCCTTGCAGCTCATTCCAGCTCCATGGCTTTGCAGACCCTGGCGTCTaGACTATTTCCACCATCAAG +
Preference number: 5 (lower is better)
Translates to: SCDRELTPPCSSFQLHGFADPGV*TISTIK
Trigger: CTTGATGGTGGAAATAGTCAAGACGCCAGGGTCTGC...AAAGCCATGGAGCTGGAATGAGCTGCAAGGAGGAGTGAGTTCTCGGTCACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp TGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTGCAGACCCTGGCGTCTaGACTATTTCCACCATCAAG +
Preference number: 5 (lower is better)
Translates to: CSSFQLHGFAGRKCSLHLADPGV*TISTIK
Trigger: CTTGATGGTGGAAATAGTCAAGACGCCAGGGTCTGC...AAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp TTCTGGGAATCTCAGAATCTCAGGACTAGCAAGCCCCAAACCCCTATTCTGGAGCTGGGCTTTCCATCCTaGTCGGTGCCACCTGAGATA +
Preference number: 5 (lower is better)
Translates to: FWESQNLRTSKPQTPILELGFPS*SVPPEI
Trigger: TATCTCAGGTGGCACCGACAAGGATGGAAAGCCCAG...CTCCAGAATAGGGGTTTGGGGCTTGCTAGTCCTGAGATTCTGAGATTCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TGCAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTTTGTCCAGGCGGATATaGTCAATGGCCAGTAGCTTG +
Preference number: 5 (lower is better)
Translates to: CSSFQLHGFAGRKCSLHLLSRRI*SMASSL
Trigger: CAAGCTACTGGCCATTGACAATATCCGCCTGGACAA...AAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp TTCTGGGAATCTCAGAATCTCAGGACTAGCAAGCCCCAAACCCCTATTCTGGAGCACAGCTATGGCTGCTaGCATCCAGAAGCCACACCT +
Preference number: 5 (lower is better)
Translates to: FWESQNLRTSKPQTPILEHSYGC*HPEATP
Trigger: AGGTGTGGCTTCTGGATGCAAGCAGCCATAGCTGTG...CTCCAGAATAGGGGTTTGGGGCTTGCTAGTCCTGAGATTCTGAGATTCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp AGTCCTGGAGTCAATGCAGTTTTCCCAAGCCGAGAGGCCCTGAGAGTGTGTCCTAAGCCAGAAGAAATATaGCATATGAGGAGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: SPGVNAVFPSREALRVCPKPEEI*HMRRPA
Trigger: TGCCGGCCTCCTCATATGCAATATTTCTTCTGGCTT...AGGACACACTCTCAGGGCCTCTCGGCTTGGGAAAACTGCATTGACTCCAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp AAGTGCTCCCTACATCTTCGACCTCTCCAAGGAGGCCCCACAGAGACCTGGGACTATCCCGTTACTCCCTaGTTTTCTTTGTTGCACTTG +
Preference number: 5 (lower is better)
Translates to: KCSLHLRPLQGGPTETWDYPVTP*FSLLHL
Trigger: CAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATA...GTCCCAGGTCTCTGTGGGGCCTCCTTGGAGAGGTCGAAGATGTAGGGAGCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp AGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGAGCGCAGAGAATCAAATTaGCTCCCCCTACCCAAGCCT +
Preference number: 5 (lower is better)
Translates to: RDQASSQAQSLPDQQMNERRESN*LPLPKP
Trigger: AGGCTTGGGTAGGGGGAGCAAATTTGATTCTCTGCG...CTCATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GGCGCTCACTGGGGAAAGGTGTCAGGAAATTTCAAGTCGGGGATGAACCATCCCATCTGGAATAAACCATaGTCCCCATCAAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: GAHWGKVSGNFKSGMNHPIWNKP*SPSRPP
Trigger: TGGTGGCCTTGATGGGGACAATGGTTTATTCCAGAT...GGGATGGTTCATCCCCGACTTGAAATTTCCTGACACCTTTCCCCAGTGAGCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CCAAGGCCCATAGAGCCTGCCCAATGGGCCCAGAACCACAGTCTCAAGTCCCAGGTGTGTAGTTCAGTCTaGCAGTATACAAGCTTTTGT +
Preference number: 5 (lower is better)
Translates to: PRPIEPAQWAQNHSLKSQVCSSV*QYTSFC
Trigger: ACAAAAGCTTGTATACTGCAAGACTGAACTACACAC...CTGGGACTTGAGACTGTGGTTCTGGGCCCATTGGGCAGGCTCTATGGGCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS TCA 90 bp AGCTATTGCCCTCCTTGTAGAGGGAGACGTCCACTGTCTTTGAAATaGTCCTGGGGTTATTCTCAGGAGCTGGGGAGAAATGGAGGACTC +
Preference number: 5 (lower is better)
Translates to: SYCPPCRGRRPLSLK*SWGYSQELGRNGGL
Trigger: GAGTCCTCCATTTCTCCCCAGCTCCTGAGAATAACCCCAGGATCATTTCAAAGACAGTGGACGTCTCCCTCTACAAGGAGGGCAATAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422481.5
CDS TCA 90 bp GCCAAAGCTATTGCCCTCCTTGTAGAGGGAGACGTCCACTGTCTTTaGAATGATCCTGGGGTTATTCTCAGGAGCTGGGGAGAAATGGAG +
Preference number: 5 (lower is better)
Translates to: AKAIALLVEGDVHCL*NDPGVILRSWGEME
Trigger: CTCCATTTCTCCCCAGCTCCTGAGAATAACCCCAGGATCATTTCAAAGACAGTGGACGTCTCCCTCTACAAGGAGGGCAATAGCTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422481.5
CDS-3UTR CAA 90 bp AACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATGCCACGCTGCCTTTCTaGATGTCGGAGATGATCAAG +
Preference number: 5 (lower is better)
Translates to: NRDQASSQAQSLPDQQMNATLPF*MSEMIK
Trigger: CTTGATCATCTCCGACATCAAGAAAGGCAGCGTGGC...ATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS-3UTR CAA 90 bp CAGCTCATTCCAGCTCCATGGCTTTGCTGGGAGGAAGTGCTCCCTACATCTTCGAAAAGAACAGACCTCTaGACTCCTCATCTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: QLIPAPWLCWEEVLPTSSKRTDL*TPHLFP
Trigger: AGGGAACAGATGAGGAGTCAAGAGGTCTGTTCTTTT...CGAAGATGTAGGGAGCACTTCCTCCCAGCAAAGCCATGGAGCTGGAATGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TTTCTCTCCCATCTCCCTCCCTCTTTCTCCTCTTCCTCCACTGATCTGGCTGTAGCGAGGAAAAGGGAGTaGAAGACAAGGATCGGCTTT +
Preference number: 5 (lower is better)
Translates to: FLSHLPPSFSSSSTDLAVARKRE*KTRIGF
Trigger: AAAGCCGATCCTTGTCTTCAACTCCCTTTTCCTCGC...TACAGCCAGATCAGTGGAGGAAGAGGAGAAAGAGGGAGGGAGATGGGAGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CTGCTTGCATCCAGAAGCCACACCTCTGCTGTGCTGTCCCTCACCCTCAAAAGTTCCAACATGTGTGGGTaGTGTTCTGGTGAGGTATTT +
Preference number: 5 (lower is better)
Translates to: LLASRSHTSAVLSLTLKSSNMCG*CSGEVF
Trigger: AAATACCTCACCAGAACACAACCCACACATGTTGGA...ACTTTTGAGGGTGAGGGACAGCACAGCAGAGGTGTGGCTTCTGGATGCAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp ACTTCTTTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTGCCACGCTGCCTTTCTaGATGTCGGAGATGATCAAG +
Preference number: 5 (lower is better)
Translates to: TSLNKHFGHPPLGKSVPSATLPF*MSEMIK
Trigger: CTTGATCATCTCCGACATCAAGAAAGGCAGCGTGGC...AGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAAAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGATGTTGAGGCTAACGTTGTaGATGGCCAGAATGCGGTCC +
Preference number: 5 (lower is better)
Translates to: SPWSLYPVTPLFSLLHLMLRLTL*MARMRS
Trigger: GGACCGCATTCTGGCCATCAACAACGTTAGCCTCAA...CATCAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TTCTGGGAATCTCAGAATCTCAGGACTAGCAAGCCCCAAACCCCTATTCTGGAGCCTGATTGCATACTTTaGGGAGAATGGCAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: FWESQNLRTSKPQTPILEPDCIL*GEWQRP
Trigger: AGGCCTCTGCCATTCTCCCAAAAGTATGCAATCAGG...CTCCAGAATAGGGGTTTGGGGCTTGCTAGTCCTGAGATTCTGAGATTCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS TCA 90 bp AATAGCTCATCACAGGGCCCTGTCCCAAGGACAGATTTAGATTTCTaGCAAGGCCGTTCCAGGCTTCTCTTAAAATGGCCAGGAATCTCC +
Preference number: 5 (lower is better)
Translates to: NSSSQGPVPRTDLDF*QGRSRLLLKWPGIS
Trigger: GGAGATTCCTGGCCATTTTAAGAGAAGCCTGGAACGGCCTTGTCAGAAATCTAAATCTGTCCTTGGGACAGGGCCCTGTGATGAGCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS TCA 90 bp ATCTATTCTGGATACTGTCCTCTCTCCACCAGAATGCCAGCTCCATaGGAACAGACACCTCAATTCTGTTGTTCTAGGCTGGATCCCCAG +
Preference number: 5 (lower is better)
Translates to: IYSGYCPLSTRMPAP*EQTPQFCCSRLDPQ
Trigger: CTGGGGATCCAGCCTAGAACAACAGAATTGAGGTGTCTGTTCTCATGGAGCTGGCATTCTGGTGGAGAGAGGACAGTATCCAGAATAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS-3UTR CAA 90 bp GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATAGCACTGCCGCAGGATTaGCACGGCGTCCTCCATGGG +
Preference number: 5 (lower is better)
Translates to: GTFVFEQDPWCVVQSCSIALPQD*HGVLHG
Trigger: CCCATGGAGGACGCCGTGCAAATCCTGCGGCAGTGC...TATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAATGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TCACCCTGGTCCCTCTATCCCGTTACTCCCTTGTTTTCTTTGTTGCACTTGATGCGGTCTAGTTGCTTCTaGATCTTCAGTGTGACGGTC +
Preference number: 5 (lower is better)
Translates to: SPWSLYPVTPLFSLLHLMRSSCF*IFSVTV
Trigger: GACCGTCACACTGAAGATCAAGAAGCAACTAGACCG...CATCAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATAGAGGGACCAGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp AACAGAGACCAAGCATCATCCCAGGCTCAGAGTCTGCCAGACCAACAGATGAATAAAAGAACAGACCTCTaGACTCCTCATCTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: NRDQASSQAQSLPDQQMNKRTDL*TPHLFP
Trigger: AGGGAACAGATGAGGAGTCAAGAGGTCTGTTCTTTT...ATTCATCTGTTGGTCTGGCAGACTCTGAGCCTGGGATGATGCTTGGTCTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATAGCTCCTCTGGGCATCTaGGAGACCCAACTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: GTFVFEQDPWCVVQSCSIAPLGI*ETQLGE
Trigger: CTCGCCAAGTTGGGTCTCCAAGATGCCCAGAGGAGC...TATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAATGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTTTTTCTTGTCTTCAGGTCTCATaGCAAATGTCGCCTCTTGAG +
Preference number: 5 (lower is better)
Translates to: LNKHFGHPPLGKSVPSFSCLQVS*QMSPLE
Trigger: CTCAAGAGGCGACATTTGCAATGAGACCTGAAGACA...AGAAAAAGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS TCA 90 bp CTCTCCCCAACCAAGCCTACTTCATTGCTTGGCAGATTTTCCCACTaGATACTTACCTTAACGGTCCTGTGTTCTTCAAAGTCAGAACTG +
Preference number: 5 (lower is better)
Translates to: LSPTKPTSLLGRFSH*ILTLTVLCSSKSEL
Trigger: CAGTTCTGACTTTGAAGAACACAGGACCGTTAAGGTAAGTATTCAGTGGGAAAATCTGCCAAGCAATGAAGTAGGCTTGGTTGGGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 90 bp CACCATATCTTATCTATTCTGGATACTGTCCTCTCTCCACCAGAATaGCAGCTCCATGAGAACAGACACCTCAATTCTGTTGTTCTAGGC +
Preference number: 5 (lower is better)
Translates to: HHILSILDTVLSPPE*QLHENRHLNSVVLG
Trigger: GCCTAGAACAACAGAATTGAGGTGTCTGTTCTCATGGAGCTGGCATTCTGGTGGAGAGAGGACAGTATCCAGAATAGATAAGATATGGTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS-3UTR CAA 90 bp CAAAGAATCACCCACTTTCAGAATCAAAGGGCCAGCACTTCCTGGGATCCCAGAGTGTGTAGTTCAGTCTaGCAGTATACAAGCTTTTGT +
Preference number: 5 (lower is better)
Translates to: QRITHFQNQRASTSWDPRVCSSV*QYTSFC
Trigger: ACAAAAGCTTGTATACTGCAAGACTGAACTACACAC...TCTGGGATCCCAGGAAGTGCTGGCCCTTTGATTCTGAAAGTGGGTGATTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACTGGGCTTTCCATCCTaGTCGGTGCCACCTGAGATA +
Preference number: 5 (lower is better)
Translates to: GTFVFEQDPWCVVQSCSILGFPS*SVPPEI
Trigger: TATCTCAGGTGGCACCGACAAGGATGGAAAGCCCAG...TATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAATGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp TTGAATAAGCACTTTGGACACCCTCCACTGGGCAAGAGTGTCCCATCTTTTTCTTATCCCGTTACTCCCTaGTTTTCTTTGTTGCACTTG +
Preference number: 5 (lower is better)
Translates to: LNKHFGHPPLGKSVPSFSYPVTP*FSLLHL
Trigger: CAAGTGCAACAAAGAAAACAAGGGAGTAACGGGATA...AGAAAAAGATGGGACACTCTTGCCCAGTGGAGGGTGTCCAAAGTGCTTATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS-3UTR CAA 90 bp CTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCAAATTACGTAACCTCTCTGAGGAACATTTGTATTaGAACAAGATCCTTGGTGTG +
Preference number: 5 (lower is better)
Translates to: LVPSLTTCVDLGKLRNLSEEHLY*NKILGV
Trigger: CACACCAAGGATCTTGTTCAAATACAAATGTTCCTC...AGAGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619221.4
ENST00000621039.5
CDS CCA 90 bp CATAGCACTTATTGCCAACTGACATACACCATATCTTATCTATTCTaGATACTGTCCTCTCTCCACCAGAATGCCAGCTCCATGAGAACA +
Preference number: 5 (lower is better)
Translates to: HSTYCQLTYTISYLF*ILSSLHQNASSMRT
Trigger: TGTTCTCATGGAGCTGGCATTCTGGTGGAGAGAGGACAGTATCCAGAATAGATAAGATATGGTGTATGTCAGTTGGCAATAAGTGCTATG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS-3UTR CAA 90 bp CTGGTTCCATCCCTTACTACCTGTGTGGACTTGGGCAAATTACGTAACCTCTCTTCTGAGGAGGAACATTaGTATTTGAACAAGATCCTT +
Preference number: 5 (lower is better)
Translates to: LVPSLTTCVDLGKLRNLSSEEEH*YLNKIL
Trigger: AAGGATCTTGTTCAAATACAAATGTTCCTCCTCAGA...AGAGAGGTTACGTAATTTGCCCAAGTCCACACAGGTAGTAAGGGATGGAACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621039.5
CDS CCA 72 bp CCTGAAAGAGTGCCTCGTGGCTGCACTGCCGCAGGGTaGCCAGGGCGGTGGCATGGCTGGCCCCGTGCAGCG +
Preference number: 6 (lower is better)
Translates to: PERVPRGCTAAG*PGRWHGWPRAA
Trigger: CGCTGCACGGGGCCAGCCATGCCACCGCCCTGGCCACCCTGCGGCAGTGCAGCCACGAGGCACTCTTTCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413414.1
ENST00000422481.5
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS TCA 72 bp GAGACGCCGCCTCACCACGCCCAGCCGCCACTTGAGTaGCACCGCCAGCATTGTGCCCTCCTGCCCTCCGGC +
Preference number: 6 (lower is better)
Translates to: ETPPHHAQPPLE*HRQHCALLPSG
Trigger: GCCGGAGGGCAGGAGGGCACAATGCTGGCGGTGTCACTCAAGTGGCGGCTGGGCGTGGTGAGGCGGCGTCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637182.1
ENST00000637939.1
CDS CCA 72 bp GCCCTCCTCTCGGGCAGGGCCAGGGGCTGGGCTCGTTaGCGGCTCCCAATCATCCTCCTCCTCCTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: ALLSGRARGWAR*RLPIILLLLLW
Trigger: CCAGAGGAGGAGGAGGAGGATGATTGGGAGCCGCCAACGAGCCCAGCCCCTGGCCCTGCCCGAGAGGAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS GCA 72 bp GGGTCTCCACAGAGCACGACCTCCGTGGTCTCCGTGTaGACAATCTGCCCGCCCGGCCCCACCGTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: GSPQSTTSVVSV*TICPPGPTVLE
Trigger: CTCCAGCACGGTGGGGCCGGGCGGGCAGATTGTGCACACGGAGACCACGGAGGTCGTGCTCTGTGGAGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 72 bp GGGGAGGACAGGGTCTCGGTGGCGAAGATGCCGCCCTaGAGCTGGAGGCCAAAGCCGCTGAGGGGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: GEDRVSVAKMPP*SWRPKPLRGSP
Trigger: TGGAGACCCCCTCAGCGGCTTTGGCCTCCAGCTCCAGGGCGGCATCTTCGCCACCGAGACCCTGTCCTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS TCA 72 bp CATGGCTGGCCCCGTGCAGCGGGATTCCATCGACACTaGGCAGCCTGTCGCCCACCTTCAGGGAGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: HGWPRAAGFHRH*AACRPPSGSPP
Trigger: GGGAGGGCTCCCTGAAGGTGGGCGACAGGCTGCTCAGTGTCGATGGAATCCCGCTGCACGGGGCCAGCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413414.1
ENST00000422481.5
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 72 bp TGGGGAGGTAGCCGTGTCCACCCGCAACCGAGGCAGTaGAGAAAGTTCCCCGTCCAAGGGCACCCACCGGGC +
Preference number: 6 (lower is better)
Translates to: WGGSRVHPQPRQ*RKFPVQGHPPG
Trigger: GCCCGGTGGGTGCCCTTGGACGGGGAACTTTCTCCACTGCCTCGGTTGCGGGTGGACACGGCTACCTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422481.5
CDS CCA 72 bp AAGACAAGGATCGGCTTTGGTCCTGGCCAGCAGGTGTaGCCCAGGTGGGCATCCTGCAGTGGCCGGGCCGGG +
Preference number: 6 (lower is better)
Translates to: KTRIGFGPGQQV*PRWASCSGRAG
Trigger: CCCGGCCCGGCCACTGCAGGATGCCCACCTGGGCCACACCTGCTGGCCAGGACCAAAGCCGATCCTTGTCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 72 bp GACAGGGTCTCGGTGGCGAAGATGCCGCCCTGGAGCTaGAGGCCAAAGCCGCTGAGGGGGTCTCCACAGAGC +
Preference number: 6 (lower is better)
Translates to: DRVSVAKMPPWS*RPKPLRGSPQS
Trigger: GCTCTGTGGAGACCCCCTCAGCGGCTTTGGCCTCCAGCTCCAGGGCGGCATCTTCGCCACCGAGACCCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CAA 90 bp GGGATGACGGACTCCGCCACATCGAACTCCACCTCCAGCACGACCTaGTGGGCCAGTGCGGCGTCCCGCAGGAGCTGGTTGGCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: GMTDSATSNSTSSTT*WASAASRRSWLASS
Trigger: GGAGGAAGCCAACCAGCTCCTGCGGGACGCCGCACTGGCCCACAAGGTCGTGCTGGAGGTGGAGTTCGATGTGGCGGAGTCCGTCATCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS TCA 72 bp GCAGCCCACACCTCTCAGCCGGACTGTCAGGCTCGATaGAGCACACGAGGGGTGGGGAGGACAGGGTCTCGG +
Preference number: 6 (lower is better)
Translates to: AAHTSQPDCQAR*STRGVGRTGSR
Trigger: CCGAGACCCTGTCCTCCCCACCCCTCGTGTGCTTCATCGAGCCTGACAGTCCGGCTGAGAGGTGTGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS GCA 72 bp CTGTCTGCGGCACGCCAGGGAAACGTCGGCCCCTCCTaGGTCCTTGCCTCCTTTGGAGTAGGGCCCATCGTC +
Preference number: 6 (lower is better)
Translates to: LSAARQGNVGPS*VLASFGVGPIV
Trigger: GACGATGGGCCCTACTCCAAAGGAGGCAAGGACGCAGGAGGGGCCGACGTTTCCCTGGCGTGCCGCAGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413414.1
ENST00000422481.5
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
ENST00000637939.1
CDS CCA 72 bp GGGAAACGTCGGCCCCTCCTGCGTCCTTGCCTCCTTTaGAGTAGGGCCCATCGTCCGCCTCTCCAGGGGTCT +
Preference number: 6 (lower is better)
Translates to: GKRRPLLRPCLL*SRAHRPPLQGS
Trigger: AGACCCCTGGAGAGGCGGACGATGGGCCCTACTCCAAAGGAGGCAAGGACGCAGGAGGGGCCGACGTTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413414.1
ENST00000619221.4
ENST00000621039.5
CDS CCA 72 bp AGCCGGACTGTCAGGCTCGATGAAGCACACGAGGGGTaGGGAGGACAGGGTCTCGGTGGCGAAGATGCCGCC +
Preference number: 6 (lower is better)
Translates to: SRTVRLDEAHEG*GGQGLGGEDAA
Trigger: GGCGGCATCTTCGCCACCGAGACCCTGTCCTCCCCACCCCTCGTGTGCTTCATCGAGCCTGACAGTCCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 72 bp ACGACCTTGTGGGCCAGTGCGGCGTCCCGCAGGAGCTaGTTGGCTTCCTCCATAGTCCCGTCCTCGGTGGCA +
Preference number: 6 (lower is better)
Translates to: TTLWASAASRRS*LASSIVPSSVA
Trigger: TGCCACCGAGGACGGGACTATGGAGGAAGCCAACCAGCTCCTGCGGGACGCCGCACTGGCCCACAAGGTCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 72 bp TCCGCCACATCGAACTCCACCTCCAGCACGACCTTGTaGGCCAGTGCGGCGTCCCGCAGGAGCTGGTTGGCT +
Preference number: 6 (lower is better)
Translates to: SATSNSTSSTTL*ASAASRRSWLA
Trigger: AGCCAACCAGCTCCTGCGGGACGCCGCACTGGCCCACAAGGTCGTGCTGGAGGTGGAGTTCGATGTGGCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CAA 72 bp GACTCCGCCACATCGAACTCCACCTCCAGCACGACCTaGTGGGCCAGTGCGGCGTCCCGCAGGAGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: DSATSNSTSSTT*WASAASRRSWL
Trigger: CAACCAGCTCCTGCGGGACGCCGCACTGGCCCACAAGGTCGTGCTGGAGGTGGAGTTCGATGTGGCGGAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS GCA 72 bp AAGGACAGCACCAGGGCCCAGAGAGGGTGCAAGCTGTaGCCATGCCACACGGCATTGGGGGCTGCTCTGAGC +
Preference number: 6 (lower is better)
Translates to: KDSTRAQRGCKL*PCHTALGAALS
Trigger: GCTCAGAGCAGCCCCCAATGCCGTGTGGCATGGGCACAGCTTGCACCCTCTCTGGGCCCTGGTGCTGTCCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 72 bp CCACATCATACTCCACCTGAAAGAGTGCCTCGTGGCTaGACTGCCGCAGGGTGGCCAGGGCGGTGGCATGGC +
Preference number: 6 (lower is better)
Translates to: PHHTPPERVPRG*TAAGWPGRWHG
Trigger: GCCATGCCACCGCCCTGGCCACCCTGCGGCAGTGCAGCCACGAGGCACTCTTTCAGGTGGAGTATGATGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413414.1
ENST00000422481.5
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS GCA 72 bp TCTCCGTGTGCACAATCTGCCCGCCCGGCCCCACCGTaGTGGAGGCTAGCGACAACGAGCTCTTGTGTTCCC +
Preference number: 6 (lower is better)
Translates to: SPCAQSARPAPP*WRLATTSSCVP
Trigger: GGGAACACAAGAGCTCGTTGTCGCTAGCCTCCAGCACGGTGGGGCCGGGCGGGCAGATTGTGCACACGGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 72 bp TTCAGTGTGACGGTCTCTCCAGCCACCTGCAGGAGGTaGATGGCCTCGCTCAGCGGCCGGCCCTTGAGGCTA +
Preference number: 6 (lower is better)
Translates to: FSVTVSPATCRR*MASLSGRPLRL
Trigger: TAGCCTCAAGGGCCGGCCGCTGAGCGAGGCCATCCACCTCCTGCAGGTGGCTGGAGAGACCGTCACACTGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 72 bp CTCCTCCTCCTCTGGAAAGCTCTCGTCAGCTGGGGTTaGGGTATAGCTCGTCCTCCGGGGCTCGGTGGGTGG +
Preference number: 6 (lower is better)
Translates to: LLLLWKALVSWG*GIARPPGLGGW
Trigger: CCACCCACCGAGCCCCGGAGGACGAGCTATACCCCAACCCCAGCTGACGAGAGCTTTCCAGAGGAGGAGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CAA 72 bp GCCTCGCTCAGCGGCCGGCCCTTGAGGCTAACGTTGTaGATGGCCAGAATGCGGTCCCCCACGTGGATGGCA +
Preference number: 6 (lower is better)
Translates to: ASLSGRPLRLTL*MARMRSPTWMA
Trigger: TGCCATCCACGTGGGGGACCGCATTCTGGCCATCAACAACGTTAGCCTCAAGGGCCGGCCGCTGAGCGAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CAA 72 bp ACCTTGTGGGCCAGTGCGGCGTCCCGCAGGAGCTGGTaGGCTTCCTCCATAGTCCCGTCCTCGGTGGCAATG +
Preference number: 6 (lower is better)
Translates to: TLWASAASRRSW*ASSIVPSSVAM
Trigger: CATTGCCACCGAGGACGGGACTATGGAGGAAGCCAACCAGCTCCTGCGGGACGCCGCACTGGCCCACAAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CAA 90 bp AGGTGGATGGCCTCGCTCAGCGGCCGGCCCTTGAGGCTAACGTTGTaGATGGCCAGAATGCGGTCCCCCACGTGGATGGCACCAGTCCTC +
Preference number: 6 (lower is better)
Translates to: RWMASLSGRPLRLTL*MARMRSPTWMAPVL
Trigger: GAGGACTGGTGCCATCCACGTGGGGGACCGCATTCTGGCCATCAACAACGTTAGCCTCAAGGGCCGGCCGCTGAGCGAGGCCATCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CAA 90 bp AGGAGGTGGATGGCCTCGCTCAGCGGCCGGCCCTTGAGGCTAACGTaGTTGATGGCCAGAATGCGGTCCCCCACGTGGATGGCACCAGTC +
Preference number: 6 (lower is better)
Translates to: RRWMASLSGRPLRLT*LMARMRSPTWMAPV
Trigger: GACTGGTGCCATCCACGTGGGGGACCGCATTCTGGCCATCAACAACGTTAGCCTCAAGGGCCGGCCGCTGAGCGAGGCCATCCACCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS TCA 72 bp GGCCGAGCTGGGTCGATCAGCCAGGACCCAGGAGACTaGGTCACAGACGGCTACAGCAGTGGCCAATCAGCG +
Preference number: 6 (lower is better)
Translates to: GRAGSISQDPGD*VTDGYSSGQSA
Trigger: CGCTGATTGGCCACTGCTGTAGCCGTCTGTGACTCAGTCTCCTGGGTCCTGGCTGATCGACCCAGCTCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS TCA 72 bp GCCACCGTGTCAGGGGTGGCCACATCATACTCCACCTaGAAGAGTGCCTCGTGGCTGCACTGCCGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: ATVSGVATSYST*KSASWLHCRRV
Trigger: CACCCTGCGGCAGTGCAGCCACGAGGCACTCTTTCAGGTGGAGTATGATGTGGCCACCCCTGACACGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS GCA 72 bp GTGCAAGCTGTGCCCATGCCACACGGCATTGGGGGCTaGTCTGAGCCGTCCTGGTCCCTTCCCATTGCTCCA +
Preference number: 6 (lower is better)
Translates to: VQAVPMPHGIGG*SEPSWSLPIAP
Trigger: TGGAGCAATGGGAAGGGACCAGGACGGCTCAGAGCAGCCCCCAATGCCGTGTGGCATGGGCACAGCTTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 72 bp AGCTGGGGGTGCTCTTCAAGCGTCACCCCCAACTCCTaGCTCAGGGACAAAGGACAGCACCAGGGCCCAGAG +
Preference number: 6 (lower is better)
Translates to: SWGCSSSVTPNS*LRDKGQHQGPE
Trigger: CTCTGGGCCCTGGTGCTGTCCTTTGTCCCTGAGGCAGGAGTTGGGGGTGACGCTTGAAGAGCACCCCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 72 bp ATCGAACTCCACCTCCAGCACGACCTTGTGGGCCAGTaGGGCGTCCCGCAGGAGCTGGTTGGCTTCCTCCAT +
Preference number: 6 (lower is better)
Translates to: IELHLQHDLVGQ*GVPQELVGFLH
Trigger: ATGGAGGAAGCCAACCAGCTCCTGCGGGACGCCGCACTGGCCCACAAGGTCGTGCTGGAGGTGGAGTTCGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 72 bp CTTAGCTCTCGCTTGGACAGCTGCTGCCGCTTCCTATaGCCTCCCGGCTTCCACCTCACCCTGCTCTGCCCT +
Preference number: 6 (lower is better)
Translates to: LSSRLDSCCRFL*PPGFHLTLLCP
Trigger: AGGGCAGAGCAGGGTGAGGTGGAAGCCGGGAGGCCATAGGAAGCGGCAGCAGCTGTCCAAGCGAGAGCTAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CAA 72 bp ATGGCCTCGCTCAGCGGCCGGCCCTTGAGGCTAACGTaGTTGATGGCCAGAATGCGGTCCCCCACGTGGATG +
Preference number: 6 (lower is better)
Translates to: MASLSGRPLRLT*LMARMRSPTWM
Trigger: CATCCACGTGGGGGACCGCATTCTGGCCATCAACAACGTTAGCCTCAAGGGCCGGCCGCTGAGCGAGGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CAA 72 bp GAGACGGGGTGGAGAGCGGTGACACAGGATGCCTCGTaGGCGGCTCCCAATCATCCTCCTCCTCCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: ETGWRAVTQDAS*AAPNHPPPPPL
Trigger: CAGAGGAGGAGGAGGAGGATGATTGGGAGCCGCCAACGAGGCATCCTGTGTCACCGCTCTCCACCCCGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS CAA 90 bp TCCAGCACGACCTTGTGGGCCAGTGCGGCGTCCCGCAGGAGCTGGTaGGCTTCCTCCATAGTCCCGTCCTCGGTGGCAATGCCATTGATG +
Preference number: 6 (lower is better)
Translates to: SSTTLWASAASRRSW*ASSIVPSSVAMPLM
Trigger: CATCAATGGCATTGCCACCGAGGACGGGACTATGGAGGAAGCCAACCAGCTCCTGCGGGACGCCGCACTGGCCCACAAGGTCGTGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CAA 90 bp GGCAGCTCATACTCCACCTCCAGCACCACGCGCTCGCCCACATTCTaGAGCAGGGTGATGATCTCATCGTGGCGGAGCCTGGTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: GSSYSTSSTTRSPTF*SRVMISSWRSLVRW
Trigger: CCACCTGACCAGGCTCCGCCACGATGAGATCATCACCCTGCTCAAGAATGTGGGCGAGCGCGTGGTGCTGGAGGTGGAGTATGAGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413414.1
ENST00000422481.5
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
ENST00000637939.1
CDS CAA 90 bp GGGGCAGATGAGACGGGGTGGAGAGCGGTGACACAGGATGCCTCGTaGGCGGCTCCCAATCATCCTCCTCCTCCTCCTCTGGAAAGCTCT +
Preference number: 6 (lower is better)
Translates to: GADETGWRAVTQDAS*AAPNHPPPPPLESS
Trigger: AGAGCTTTCCAGAGGAGGAGGAGGAGGATGATTGGGAGCCGCCAACGAGGCATCCTGTGTCACCGCTCTCCACCCCGTCTCATCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS CAA 90 bp AGCTGGTTGGCTTCCTCCATAGTCCCGTCCTCGGTGGCAATGCCATaGATGGACAGGACACGGTCCCCCACCTGCAGCAGCCCACACCTC +
Preference number: 6 (lower is better)
Translates to: SWLASSIVPSSVAMP*MDRTRSPTCSSPHL
Trigger: GAGGTGTGGGCTGCTGCAGGTGGGGGACCGTGTCCTGTCCATCAATGGCATTGCCACCGAGGACGGGACTATGGAGGAAGCCAACCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS TCA 72 bp CCCAACTCACCAGGGGTGGCCACATCATACTCCACCTaGAAGAGTGCCTCGTGGCTGCACTGCCGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: PNSPGVATSYST*KSASWLHCRRV
Trigger: CACCCTGCGGCAGTGCAGCCACGAGGCACTCTTTCAGGTGGAGTATGATGTGGCCACCCCTGGTGAGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS TCA 72 bp CTGGGGCACAGGCAGGATCTCCAGCCGCACCTTCTCTaGAATGCTGGCCAGGAGCTTGGTGGCCTCAAGCAG +
Preference number: 6 (lower is better)
Translates to: LGHRQDLQPHLL*NAGQELGGLKQ
Trigger: CTGCTTGAGGCCACCAAGCTCCTGGCCAGCATTTCAGAGAAGGTGCGGCTGGAGATCCTGCCTGTGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS GCA 72 bp AGCCTGGTTCAGTCCCTTAGCTCTCGCTTGGACAGCTaGTGCCGCTTCCTATGGCCTCCCGGCTTCCACCTC +
Preference number: 6 (lower is better)
Translates to: SLVQSLSSRLDS*CRFLWPPGFHL
Trigger: GAGGTGGAAGCCGGGAGGCCATAGGAAGCGGCAGCAGCTGTCCAAGCGAGAGCTAAGGGACTGAACCAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 72 bp GCACAGGCAGGATCTCCAGCCGCACCTTCTCTGAAATaGTGGCCAGGAGCTTGGTGGCCTCAAGCAGCGAGC +
Preference number: 6 (lower is better)
Translates to: AQAGSPAAPSLK*WPGAWWPQAAS
Trigger: GCTCGCTGCTTGAGGCCACCAAGCTCCTGGCCAGCATTTCAGAGAAGGTGCGGCTGGAGATCCTGCCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 72 bp CTTCGCAGGGGAGTTGGGGCAGGTCAGTGCAGTGTGTaGATTTCTTCTGCCTCGGCTCACCTGTCGGCAGGG +
Preference number: 6 (lower is better)
Translates to: LRRGVGAGQCSV*ISSASAHLSAG
Trigger: CCCTGCCGACAGGTGAGCCGAGGCAGAAGAAATCCACACACTGCACTGACCTGCCCCAACTCCCCTGCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CCA 72 bp GGGAAACGTCGGCCCCTCCTGCGTCCTTGCCTCCTTTaGAGTAGGGCCCATCGTCTGCAGGAGAGAAAGAGG +
Preference number: 6 (lower is better)
Translates to: GKRRPLLRPCLL*SRAHRLQERKR
Trigger: CCTCTTTCTCTCCTGCAGACGATGGGCCCTACTCCAAAGGAGGCAAGGACGCAGGAGGGGCCGACGTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422481.5
CDS CCA 72 bp GCGGGCTGCTGGCAGGCCTCCTTTCAGGGCATCTGCTaGGTCCTCATCAGCATCACTGGTCTCACTGAGGCT +
Preference number: 6 (lower is better)
Translates to: AGCWQASFQGIC*VLISITGLTEA
Trigger: AGCCTCAGTGAGACCAGTGATGCTGATGAGGACCCAGCAGATGCCCTGAAAGGAGGCCTGCCAGCAGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CAA 72 bp GCTTCCTCCATAGTCCCGTCCTCGGTGGCAATGCCATaGATGGACAGGACACGGTCCCCCACCTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: ASSIVPSSVAMP*MDRTRSPTCSS
Trigger: GCTGCTGCAGGTGGGGGACCGTGTCCTGTCCATCAATGGCATTGCCACCGAGGACGGGACTATGGAGGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CAA 90 bp GCAAGTCCCCCAGGTCTCAGGTTGGAGACCCTGGGCTTTCCATCCTaGTCGGTGCCACCTGAGATAGTCAGGCCCAGCGTGCTGCCTTCT +
Preference number: 6 (lower is better)
Translates to: ASPPGLRLETLGFPS*SVPPEIVRPSVLPS
Trigger: AGAAGGCAGCACGCTGGGCCTGACTATCTCAGGTGGCACCGACAAGGATGGAAAGCCCAGGGTCTCCAACCTGAGACCTGGGGGACTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000413414.1
ENST00000422481.5
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
ENST00000637939.1
CDS CAA 90 bp TCCTCGCACTGCCGCAGGATTTGCACGGCGTCCTCCATGGGGCAGTaGTCCAGGCGGATATTGTCAATGGCCAGTAGCTTGTCGCCTGGC +
Preference number: 6 (lower is better)
Translates to: SSHCRRICTASSMGQ*SRRILSMASSLSPG
Trigger: GCCAGGCGACAAGCTACTGGCCATTGACAATATCCGCCTGGACAACTGCCCCATGGAGGACGCCGTGCAAATCCTGCGGCAGTGCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS GCA 72 bp CCAACCATGCTGGCCATGCTCCTGCCTCAGGGCCTTTaGACTTACTCTTCCGCCCTCCTGGAATGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: PTMLAMLLPQGL*TYSSALLECCP
Trigger: GGGACAGCATTCCAGGAGGGCGGAAGAGTAAGTGCAAAGGCCCTGAGGCAGGAGCATGGCCAGCATGGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CCA 72 bp GCAGGGTTCACCTCGGTTTGGGTCGCATCCCCAGCCTaGAACGCCTCTCCCAACAGGTGGCCAAAGCTATTC +
Preference number: 6 (lower is better)
Translates to: AGFTSVWVASPA*NASPNRWPKLF
Trigger: GAATAGCTTTGGCCACCTGTTGGGAGAGGCGTTCCAGGCTGGGGATGCGACCCAAACCGAGGTGAACCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CCA 72 bp CTAACGTTGTTGATGGCCAGAATGCGGTCCCCCACGTaGATGGCACCAGTCCTCTCAGCCAGGCCACGCTTG +
Preference number: 6 (lower is better)
Translates to: LTLLMARMRSPT*MAPVLSARPRL
Trigger: CAAGCGTGGCCTGGCTGAGAGGACTGGTGCCATCCACGTGGGGGACCGCATTCTGGCCATCAACAACGTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 72 bp GCCGCACCTTCTCTGAAATGCTGGCCAGGAGCTTGGTaGCCTCAAGCAGCGAGCAGTGTTCCATGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: AAPSLKCWPGAW*PQAASSVPCWC
Trigger: GCACCAGCATGGAACACTGCTCGCTGCTTGAGGCCACCAAGCTCCTGGCCAGCATTTCAGAGAAGGTGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 72 bp CCAGCCGCACCTTCTCTGAAATGCTGGCCAGGAGCTTaGTGGCCTCAAGCAGCGAGCAGTGTTCCATGCTGG +
Preference number: 6 (lower is better)
Translates to: PAAPSLKCWPGA*WPQAASSVPCW
Trigger: CCAGCATGGAACACTGCTCGCTGCTTGAGGCCACCAAGCTCCTGGCCAGCATTTCAGAGAAGGTGCGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 72 bp CAGGCAGGATCTCCAGCCGCACCTTCTCTGAAATGCTaGCCAGGAGCTTGGTGGCCTCAAGCAGCGAGCAGT +
Preference number: 6 (lower is better)
Translates to: QAGSPAAPSLKC*PGAWWPQAASS
Trigger: ACTGCTCGCTGCTTGAGGCCACCAAGCTCCTGGCCAGCATTTCAGAGAAGGTGCGGCTGGAGATCCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CAA 72 bp CCAGGTCTCAGGTTGGAGACCCTGGGCTTTCCATCCTaGTCGGTGCCACCTGAGATAGTCAGGCCCAGCGTG +
Preference number: 6 (lower is better)
Translates to: PGLRLETLGFPS*SVPPEIVRPSV
Trigger: CACGCTGGGCCTGACTATCTCAGGTGGCACCGACAAGGATGGAAAGCCCAGGGTCTCCAACCTGAGACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413414.1
ENST00000422481.5
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
ENST00000637939.1
CDS TCA 72 bp GGGGTTACATCCCGGTTCCATCAACAACTCCCTGAATaGCACCGGGCAGGGAGTGTTCCCTCAGGGCCTCGA +
Preference number: 6 (lower is better)
Translates to: GVTSRFHQQLPE*HRAGSVPSGPR
Trigger: TCGAGGCCCTGAGGGAACACTCCCTGCCCGGTGTCATTCAGGGAGTTGTTGATGGAACCGGGATGTAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS TCA 72 bp TTAGAACAGGGGCAGATGAGACGGGGTGGAGAGCGGTaGCACAGGATGCCTCGTTGGCGGCTCCCAATCATC +
Preference number: 6 (lower is better)
Translates to: LEQGQMRRGGER*HRMPRWRLPII
Trigger: GATGATTGGGAGCCGCCAACGAGGCATCCTGTGTCACCGCTCTCCACCCCGTCTCATCTGCCCCTGTTCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430219.2
CDS GCA 72 bp CACCCTGCTCTGCCCTTACCTCCTTTCACTCACCTGTaGCAACCACGGCAGCCTCCTCACTGTGACCAACCA +
Preference number: 6 (lower is better)
Translates to: HPALPLPPFTHL*QPRQPPHCDQP
Trigger: TGGTTGGTCACAGTGAGGAGGCTGCCGTGGTTGGCACAGGTGAGTGAAAGGAGGTAAGGGCAGAGCAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CCA 72 bp GACAGGATGGGGTGGCTCTGCCGCCTGCCACTCCTCTaGGTGTGCAGTAATTCACAGACTCAGTGCAGAACC +
Preference number: 6 (lower is better)
Translates to: DRMGWLCRLPLL*VCSNSQTQCRT
Trigger: GGTTCTGCACTGAGTCTGTGAATTACTGCACACCCAGAGGAGTGGCAGGCGGCAGAGCCACCCCATCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CCA 72 bp CGTTGGCGGCTCCCAATCATCCTCCTCCTCCTCCTCTaGAAAGCTCTCGTCAGCTGGGGTTGGGGTATAGCT +
Preference number: 6 (lower is better)
Translates to: RWRLPIILLLLL*KALVSWGWGIA
Trigger: AGCTATACCCCAACCCCAGCTGACGAGAGCTTTCCAGAGGAGGAGGAGGAGGATGATTGGGAGCCGCCAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 72 bp CTTCTTGGGCAGCTTCACGTGGAAGGTGCCACTGCTTaGGATGACGGACTCCGCCACATCGAACTCCACCTC +
Preference number: 6 (lower is better)
Translates to: LLGQLHVEGATA*DDGLRHIELHL
Trigger: GAGGTGGAGTTCGATGTGGCGGAGTCCGTCATCCCAAGCAGTGGCACCTTCCACGTGAAGCTGCCCAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CAA 72 bp ACCAACCATGCTGGCCATGCTCCTGCCTCAGGGCCTTaGCACTTACTCTTCCGCCCTCCTGGAATGCTGTCC +
Preference number: 6 (lower is better)
Translates to: TNHAGHAPASGP*HLLFRPPGMLS
Trigger: GGACAGCATTCCAGGAGGGCGGAAGAGTAAGTGCAAAGGCCCTGAGGCAGGAGCATGGCCAGCATGGTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CAA 90 bp GGGCGGGACTTGTGCCCATCTTCATGGGCACCTCCTGGACAGGATTaGACAAGAAGCAGGAATCATCCACCCACCCCTTCCCATCCAGAG +
Preference number: 6 (lower is better)
Translates to: GRDLCPSSWAPPGQD*TRSRNHPPTPSHPE
Trigger: CTCTGGATGGGAAGGGGTGGGTGGATGATTCCTGCTTCTTGTCAAATCCTGTCCAGGAGGTGCCCATGAAGATGGGCACAAGTCCCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CAA 90 bp CTCACTGTGACCAACCATGCTGGCCATGCTCCTGCCTCAGGGCCTTaGCACTTACTCTTCCGCCCTCCTGGAATGCTGTCCCTGGACATT +
Preference number: 6 (lower is better)
Translates to: LTVTNHAGHAPASGP*HLLFRPPGMLSLDI
Trigger: AATGTCCAGGGACAGCATTCCAGGAGGGCGGAAGAGTAAGTGCAAAGGCCCTGAGGCAGGAGCATGGCCAGCATGGTTGGTCACAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 72 bp ACTCAGTGCAGAACCCTGAAATGTCTGAGCTGGGGGTaGTCTTCAAGCGTCACCCCCAACTCCTGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: TQCRTLKCLSWG*SSSVTPNSCLR
Trigger: CCTGAGGCAGGAGTTGGGGGTGACGCTTGAAGAGCACCCCCAGCTCAGACATTTCAGGGTTCTGCACTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 72 bp TTCCGCCCTCCTGGAATGCTGTCCCTGGACATTCCATaGCTCGCTCATTCCCTCACTCCCCTAGTGAGAGAG +
Preference number: 6 (lower is better)
Translates to: FRPPGMLSLDIP*LAHSLTPLVRE
Trigger: CTCTCTCACTAGGGGAGTGAGGGAATGAGCGAGGCATGGAATGTCCAGGGACAGCATTCCAGGAGGGCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 72 bp CAGGGCCTTTGCACTTACTCTTCCGCCCTCCTGGAATaGTGTCCCTGGACATTCCATGCCTCGCTCATTCCC +
Preference number: 6 (lower is better)
Translates to: QGLCTYSSALLE*CPWTFHASLIP
Trigger: GGGAATGAGCGAGGCATGGAATGTCCAGGGACAGCATTCCAGGAGGGCGGAAGAGTAAGTGCAAAGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CCA 72 bp TGCACTTACTCTTCCGCCCTCCTGGAATGCTGTCCCTaGACATTCCATGCCTCGCTCATTCCCTCACTCCCC +
Preference number: 6 (lower is better)
Translates to: CTYSSALLECCP*TFHASLIPSLP
Trigger: GGGGAGTGAGGGAATGAGCGAGGCATGGAATGTCCAGGGACAGCATTCCAGGAGGGCGGAAGAGTAAGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CCA 72 bp AAGACCCTGGCCTTCACCAGGGCACAGAGGCCACTCTaGAGCAGTCTTAGCTTCAACCACGCGGGAAGGAAT +
Preference number: 6 (lower is better)
Translates to: KTLAFTRAQRPL*SSLSFNHAGRN
Trigger: ATTCCTTCCCGCGTGGTTGAAGCTAAGACTGCTCCAGAGTGGCCTCTGTGCCCTGGTGAAGGCCAGGGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619221.4
CDS CAA 72 bp TGCCGCAGGATTTGCACGGCGTCCTCCATGGGGCAGTaGTCCAGGCGGATATTGTCAATGGCCAGTAGCTTG +
Preference number: 6 (lower is better)
Translates to: CRRICTASSMGQ*SRRILSMASSL
Trigger: CAAGCTACTGGCCATTGACAATATCCGCCTGGACAACTGCCCCATGGAGGACGCCGTGCAAATCCTGCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CAA 72 bp ACGTGGATGGCACCAGTCCTCTCAGCCAGGCCACGCTaGGTGAGGCCTGAGATGACAATGGGGTCAAAAGGT +
Preference number: 6 (lower is better)
Translates to: TWMAPVLSARPR*VRPEMTMGSKG
Trigger: ACCTTTTGACCCCATTGTCATCTCAGGCCTCACCAAGCGTGGCCTGGCTGAGAGGACTGGTGCCATCCACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CAA 72 bp GACTTGCGGGGTAGGAGGGGACGGTCTAGTTGCTTCTaGATCTTCAGTGTGACGGTCTCTCCAGCCACCTGC +
Preference number: 6 (lower is better)
Translates to: DLRGRRGRSSCF*IFSVTVSPATC
Trigger: GCAGGTGGCTGGAGAGACCGTCACACTGAAGATCAAGAAGCAACTAGACCGTCCCCTCCTACCCCGCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CAA 72 bp TCATCAGCATCACTGGTCTCACTGAGGCTGCCCGACTaGCGGGGTAGGAGGGGACGGTCTAGTTGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: SSASLVSLRLPD*RGRRGRSSCFL
Trigger: CAAGAAGCAACTAGACCGTCCCCTCCTACCCCGCAAGTCGGGCAGCCTCAGTGAGACCAGTGATGCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430219.2
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CAA 90 bp TCGGTGCCACCTGAGATAGTCAGGCCCAGCGTGCTGCCTTCTTTCTaGATCAGCTCCACCACAGTGATCCCTCGGAACTCCTCTGGAATG +
Preference number: 6 (lower is better)
Translates to: SVPPEIVRPSVLPSF*ISSTTVIPRNSSGM
Trigger: CATTCCAGAGGAGTTCCGAGGGATCACTGTGGTGGAGCTGATCAAGAAAGAAGGCAGCACGCTGGGCCTGACTATCTCAGGTGGCACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413414.1
ENST00000422481.5
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
ENST00000637939.1
CDS TCA 72 bp CCTCCTTGTAGAGGGAGACGTCCACTGTCTTTGAAATaGTCCTGGGGTTATTCTCAGGAGCGGGCGGGGGCA +
Preference number: 6 (lower is better)
Translates to: PPCRGRRPLSLK*SWGYSQERAGA
Trigger: TGCCCCCGCCCGCTCCTGAGAATAACCCCAGGATCATTTCAAAGACAGTGGACGTCTCCCTCTACAAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413414.1
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS TCA 72 bp ATTTGGGGTTACATCCCGGTTCCATCAACAACTCCCTaGATGACACCGGGCAGGGAGTGTTCCCTCAGGGCC +
Preference number: 6 (lower is better)
Translates to: IWGYIPVPSTTP*MTPGRECSLRA
Trigger: GGCCCTGAGGGAACACTCCCTGCCCGGTGTCATTCAGGGAGTTGTTGATGGAACCGGGATGTAACCCCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS TCA 72 bp AGCAGATCAGGCCAGCTGGACCGTCATCATATTTCCTaGATCCCGTGCCTTCTCCCCTCCTTAGCCACCAGC +
Preference number: 6 (lower is better)
Translates to: SRSGQLDRHHIS*IPCLLPSLATS
Trigger: GCTGGTGGCTAAGGAGGGGAGAAGGCACGGGATTCAGGAAATATGATGACGGTCCAGCTGGCCTGATCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 72 bp TGCGTCCTTGCCTCCTTTGGAGTAGGGCCCATCGTCTaGAGGAGAGAAAGAGGGAAAGGCCGAGTTCCACTT +
Preference number: 6 (lower is better)
Translates to: CVLASFGVGPIV*RRERGKGRVPL
Trigger: AAGTGGAACTCGGCCTTTCCCTCTTTCTCTCCTGCAGACGATGGGCCCTACTCCAAAGGAGGCAAGGACGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422481.5
CDS GCA 72 bp GCTAGCGACAACGAGCTCTTGTGTTCCCTTCTTCGCTaGCTCCTCCGCCCCATTGTAGTTCGAGGACTCATG +
Preference number: 6 (lower is better)
Translates to: ASDNELLCSLLR*LLRPIVVRGLM
Trigger: CATGAGTCCTCGAACTACAATGGGGCGGAGGAGGCAGCGAAGAAGGGAACACAAGAGCTCGTTGTCGCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 72 bp CGGGCGGGACTTGTGCCCATCTTCATGGGCACCTCCTaGACAGGATTTGACAAGAAGCAGGAATCATCCACC +
Preference number: 6 (lower is better)
Translates to: RAGLVPIFMGTS*TGFDKKQESST
Trigger: GGTGGATGATTCCTGCTTCTTGTCAAATCCTGTCCAGGAGGTGCCCATGAAGATGGGCACAAGTCCCGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CCA 72 bp TCACAGACTCAGTGCAGAACCCTGAAATGTCTGAGCTaGGGGTGCTCTTCAAGCGTCACCCCCAACTCCTGC +
Preference number: 6 (lower is better)
Translates to: SQTQCRTLKCLS*GCSSSVTPNSC
Trigger: GCAGGAGTTGGGGGTGACGCTTGAAGAGCACCCCCAGCTCAGACATTTCAGGGTTCTGCACTGAGTCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CAA 72 bp GTGGTGAGCGAGATCCCCAGGGCAGACCCTGGCGTCTaGACTATTTCCACCATCAAGGGTCCCGAAGCATTA +
Preference number: 6 (lower is better)
Translates to: VVSEIPRADPGV*TISTIKGPEAL
Trigger: TAATGCTTCGGGACCCTTGATGGTGGAAATAGTCAAGACGCCAGGGTCTGCCCTGGGGATCTCGCTCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS TCA 72 bp CCCAACAGGTGGCCAAAGCTATTCTCGGGGGTTCTATaGATAGCTCATCACAGGGCCCTGTCCCAAGGACAG +
Preference number: 6 (lower is better)
Translates to: PNRWPKLFSGVL*IAHHRALSQGQ
Trigger: CTGTCCTTGGGACAGGGCCCTGTGATGAGCTATTCATAGAACCCCCGAGAATAGCTTTGGCCACCTGTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 72 bp TGTGACTGGCCCAAGGTCATAAGGTCATGCAGCCTTTaGAGTGGTAAAGATCCATGGCCACTGCCACCTCCC +
Preference number: 6 (lower is better)
Translates to: CDWPKVIRSCSL*SGKDPWPLPPP
Trigger: GGGAGGTGGCAGTGGCCATGGATCTTTACCACTGCAAAGGCTGCATGACCTTATGACCTTGGGCCAGTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CAA 72 bp AAAAGGCGTGGTTCAAGGTCGGCGAGGAAAAGGGAGTaGAAGACAAGGATCGGCTTTGGTCCTGGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: KRRGSRSARKRE*KTRIGFGPGQQ
Trigger: CTGCTGGCCAGGACCAAAGCCGATCCTTGTCTTCAACTCCCTTTTCCTCGCCGACCTTGAACCACGCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000619221.4
ENST00000621039.5
ENST00000637182.1
CDS CCA 72 bp TCTCCAAACACCCCAACCCCTGAGACAGCAGTATGTTaGGGAAGAAAGGGCTCGAGGTTTCCCTCATTTGGG +
Preference number: 6 (lower is better)
Translates to: SPNTPTPETAVC*GRKGSRFPSFG
Trigger: CCCAAATGAGGGAAACCTCGAGCCCTTTCTTCCCCAACATACTGCTGTCTCAGGGGTTGGGGTGTTTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 72 bp TTAGCTTCAACCACGCGGGAAGGAATGCATGTGAACTaGTCTAACAGATCCTCACCCCACTCGCCTCCATTC +
Preference number: 6 (lower is better)
Translates to: LASTTREGMHVN*SNRSSPHSPPF
Trigger: GAATGGAGGCGAGTGGGGTGAGGATCTGTTAGAGCAGTTCACATGCATTCCTTCCCGCGTGGTTGAAGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619221.4
CDS CAA 90 bp AGACAGCAGTATGTTGGGGAAGAAAGGGCTCGAGGTTTCCCTCATTaGGGGTTACATCCCGGTTCCATCAACAACTCCCTGAATGACACC +
Preference number: 6 (lower is better)
Translates to: RQQYVGEERARGFPH*GLHPGSINNSLNDT
Trigger: GGTGTCATTCAGGGAGTTGTTGATGGAACCGGGATGTAACCCCAAATGAGGGAAACCTCGAGCCCTTTCTTCCCCAACATACTGCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CAA 90 bp GAGGACTGGGTGATCAGTCACAGAGATTACAGGGAGGGTAAACCCTaGCCCATTTTACAGGTCGAACAAGTGAGGCTTAGAGGGATCCTC +
Preference number: 6 (lower is better)
Translates to: EDWVISHRDYREGKP*PILQVEQVRLRGIL
Trigger: GAGGATCCCTCTAAGCCTCACTTGTTCGACCTGTAAAATGGGCAAGGGTTTACCCTCCCTGTAATCTCTGTGACTGATCACCCAGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422481.5
CDS TCA 72 bp GTAGATGTGCCCAAAGCTCATTCCAGGAGGACTGGGTaGTCAGTCACAGAGATTACAGGGAGGGTAAACCCT +
Preference number: 6 (lower is better)
Translates to: VDVPKAHSRRTG*SVTEITGRVNP
Trigger: AGGGTTTACCCTCCCTGTAATCTCTGTGACTGATCACCCAGTCCTCCTGGAATGAGCTTTGGGCACATCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422481.5
CDS TCA 72 bp ACAGCCCCTGAGCAGGCTCCTTCAATAAAACCTGTTTaGGGACCTTGTCCTTGCTATCCATGGACCCTCTTA +
Preference number: 6 (lower is better)
Translates to: TAPEQAPSIKPV*GPCPCYPWTLL
Trigger: TAAGAGGGTCCATGGATAGCAAGGACAAGGTCCTCAAACAGGTTTTATTGAAGGAGCCTGCTCAGGGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS TCA 72 bp TCACAGGGCCCTGTCCCAAGGACAGATTTAGATTTCTaGCAAGGCCGTTCCAGGCTTCTCTTAAAATGGCCA +
Preference number: 6 (lower is better)
Translates to: SQGPVPRTDLDF*QGRSRLLLKWP
Trigger: TGGCCATTTTAAGAGAAGCCTGGAACGGCCTTGTCAGAAATCTAAATCTGTCCTTGGGACAGGGCCCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS TCA 72 bp TGCCTAGCACATACTATTTACTGCCCAGAGAAGCTGTaGCTGGCCCAAGGTCATAAGGTCATGCAGCCTTTG +
Preference number: 6 (lower is better)
Translates to: CLAHTIYCPEKL*LAQGHKVMQPL
Trigger: CAAAGGCTGCATGACCTTATGACCTTGGGCCAGTCACAGCTTCTCTGGGCAGTAAATAGTATGTGCTAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS TCA 72 bp CCTCCTTGTAGAGGGAGACGTCCACTGTCTTTGAAATaGTCCTGGGGTTATTCTCAGGAGCTGGGGAGAAAT +
Preference number: 6 (lower is better)
Translates to: PPCRGRRPLSLK*SWGYSQELGRN
Trigger: ATTTCTCCCCAGCTCCTGAGAATAACCCCAGGATCATTTCAAAGACAGTGGACGTCTCCCTCTACAAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422481.5
CDS GCA 72 bp TGTTGTTCTAGGCTGGATCCCCAGCACATCAAACAATaGCTAGCACATACTATTTACTGCCCAGAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: CCSRLDPQHIKQ*LAHTIYCPEKL
Trigger: CAGCTTCTCTGGGCAGTAAATAGTATGTGCTAGGCATTGTTTGATGTGCTGGGGATCCAGCCTAGAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CAA 72 bp TTCCCCTTTTCCCTGATCTCTAGGAAGCTCCAGACTTaGTTCTCAGTCTCGGTAGCAGCTTTCACCATCATT +
Preference number: 6 (lower is better)
Translates to: FPFSLISRKLQT*FSVSVAAFTII
Trigger: AATGATGGTGAAAGCTGCTACCGAGACTGAGAACAAAGTCTGGAGCTTCCTAGAGATCAGGGAAAAGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CAA 72 bp GTGATCAGTCACAGAGATTACAGGGAGGGTAAACCCTaGCCCATTTTACAGGTCGAACAAGTGAGGCTTAGA +
Preference number: 6 (lower is better)
Translates to: VISHRDYREGKP*PILQVEQVRLR
Trigger: TCTAAGCCTCACTTGTTCGACCTGTAAAATGGGCAAGGGTTTACCCTCCCTGTAATCTCTGTGACTGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422481.5
CDS CAA 72 bp GGCTCCTTCAATAAAACCTGTTTGAGGACCTTGTCCTaGCTATCCATGGACCCTCTTATGAGACACCAACAA +
Preference number: 6 (lower is better)
Translates to: GSFNKTCLRTLS*LSMDPLMRHQQ
Trigger: TTGTTGGTGTCTCATAAGAGGGTCCATGGATAGCAAGGACAAGGTCCTCAAACAGGTTTTATTGAAGGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS GCA 72 bp TTATCTATTCTGGATACTGTCCTCTCTCCACCAGAATaGCAGCTCCATGAGAACAGACACCTCAATTCTGTT +
Preference number: 6 (lower is better)
Translates to: LSILDTVLSPPE*QLHENRHLNSV
Trigger: AACAGAATTGAGGTGTCTGTTCTCATGGAGCTGGCATTCTGGTGGAGAGAGGACAGTATCCAGAATAGATAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS CCA 72 bp TATTGCCAACTGACATACACCATATCTTATCTATTCTaGATACTGTCCTCTCTCCACCAGAATGCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: YCQLTYTISYLF*ILSSLHQNASS
Trigger: GGAGCTGGCATTCTGGTGGAGAGAGGACAGTATCCAGAATAGATAAGATATGGTGTATGTCAGTTGGCAATA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5
CDS TCA 72 bp ACCAAGCCTACTTCATTGCTTGGCAGATTTTCCCACTaGATACTTACCTTAACGGTCCTGTGTTCTTCAAAG +
Preference number: 6 (lower is better)
Translates to: TKPTSLLGRFSH*ILTLTVLCSSK
Trigger: CTTTGAAGAACACAGGACCGTTAAGGTAAGTATTCAGTGGGAAAATCTGCCAAGCAATGAAGTAGGCTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413414.1
ENST00000422481.5