RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRIN2B (Homo sapiens)

Ensembl gene IDs: ENSG00000273079

Ensembl transcript IDs: ENST00000609686.4, ENST00000627535.2, ENST00000628166.2, ENST00000630791.2, ENST00000681855.1

Found 1375 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGGCTCAAGTCACATTCCCAGGGAGCCAGGCCCAAAGAGGTGGTaGAGGGTCCCTCTCTGCCCCCGTCTCCCATTTCCAAGTCTCTTC +
Preference number: 1 (lower is better)
Translates to: LGSSHIPREPGPKRW*RVPLCPRLPFPSLF
Trigger: GAAGAGACTTGGAAATGGGAGACGGGGGCAGAGAGGGACCCTCCACCACCTCTTTGGGCCTGGCTCCCTGGGAATGTGACTTGAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp AAGCCCGCATGCAGCCCTTCCTTTCTCCGCTCTACCCTCCCCTGCTaGGAGGGCCCATGGCATCATCTCATGGGAACAGGAATGGCTGAC +
Preference number: 1 (lower is better)
Translates to: KPACSPSFLRSTLPC*EGPWHHLMGTGMAD
Trigger: GTCAGCCATTCCTGTTCCCATGAGATGATGCCATGGGCCCTCTCAGCAGGGGAGGGTAGAGCGGAGAAAGGAAGGGCTGCATGCGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp AGGAGCAAATGGGAACCAAGTTCACCCCCGTCACCCTCCGTGACATaGGCATCACGCGACCCACAGCCTTACCCTCCCGTACCCACCTTA +
Preference number: 1 (lower is better)
Translates to: RSKWEPSSPPSPSVT*ASRDPQPYPPVPTL
Trigger: TAAGGTGGGTACGGGAGGGTAAGGCTGTGGGTCGCGTGATGCGCATGTCACGGAGGGTGACGGGGGTGAACTTGGTTCCCATTTGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp CATGGCGATCCTGCAGTCAAGCTTCCACACAGACCTGGGGCTCTCTaGATGCCACCCTGTGTAGGGGAGGATGGCAGGACAGTGGAACTG +
Preference number: 1 (lower is better)
Translates to: HGDPAVKLPHRPGAL*MPPCVGEDGRTVEL
Trigger: CAGTTCCACTGTCCTGCCATCCTCCCCTACACAGGGTGGCATCCAGAGAGCCCCAGGTCTGTGTGGAAGCTTGACTGCAGGATCGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp CTGTGTGCAACATGGCGATCCTGCAGTCAAGCTTCCACACAGACCTaGGGCTCTCTGGATGCCACCCTGTGTAGGGGAGGATGGCAGGAC +
Preference number: 1 (lower is better)
Translates to: LCATWRSCSQASTQT*GSLDATLCRGGWQD
Trigger: GTCCTGCCATCCTCCCCTACACAGGGTGGCATCCAGAGAGCCCCAGGTCTGTGTGGAAGCTTGACTGCAGGATCGCCATGTTGCACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp AAGAAAGGAGCAAATGGGAACCAAGTTCACCCCCGTCACCCTCCGTaGCATGCGCATCACGCGACCCACAGCCTTACCCTCCCGTACCCA +
Preference number: 1 (lower is better)
Translates to: KKGANGNQVHPRHPP*HAHHATHSLTLPYP
Trigger: TGGGTACGGGAGGGTAAGGCTGTGGGTCGCGTGATGCGCATGTCACGGAGGGTGACGGGGGTGAACTTGGTTCCCATTTGCTCCTTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp GTGGAGTCTGGGCCTCGCAGAGCTGAGGCAAGCCTGAGTCGTCGGTaGTCCCTGGAGAGGACATCACACAGGAAAGCTATGACCATTTCC +
Preference number: 1 (lower is better)
Translates to: VESGPRRAEASLSRR*SLERTSHRKAMTIS
Trigger: GGAAATGGTCATAGCTTTCCTGTGTGATGTCCTCTCCAGGGAGCACCGACGACTCAGGCTTGCCTCAGCTCTGCGAGGCCCAGACTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp CCTCTGCCCAGGGTGATGATCAAGGGCTCCTTGGGTGCTGTAATCTaGAGGACCTGGGCAGGAATGACATGGGGCCAGGTTCCTTGTGGA +
Preference number: 1 (lower is better)
Translates to: PLPRVMIKGSLGAVI*RTWAGMTWGQVPCG
Trigger: TCCACAAGGAACCTGGCCCCATGTCATTCCTGCCCAGGTCCTTCAGATTACAGCACCCAAGGAGCCCTTGATCATCACCCTGGGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp TCTTTGAGGACCCTGAATCACTCCCAGGTGGTGAGCATTTCCACTTaGACCTTCCTCATGCCCTGGGGCCTGGAGGTGGAGATGCCCTTC +
Preference number: 1 (lower is better)
Translates to: SLRTLNHSQVVSIST*TFLMPWGLEVEMPF
Trigger: GAAGGGCATCTCCACCTCCAGGCCCCAGGGCATGAGGAAGGTGCAAGTGGAAATGCTCACCACCTGGGAGTGATTCAGGGTCCTCAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp AATCCTGGGACAGCCAAGGAGGCTCATCTTTCCGGAACAGTTGGCTaGTGGGGACACAACCGGGTGCTCCCTCAGCCTTTCATTAGACTG +
Preference number: 1 (lower is better)
Translates to: NPGTAKEAHLSGTVG*WGHNRVLPQPFIRL
Trigger: CAGTCTAATGAAAGGCTGAGGGAGCACCCGGTTGTGTCCCCATCAGCCAACTGTTCCGGAAAGATGAGCCTCCTTGGCTGTCCCAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp CACAGACAGTTCCCCCAAGGCCACAAATGTGGAAGTAGCGTGTGGTaGAATACAGTGGTCCTGTTGGACCACCACCTGGGGTCTACAAGG +
Preference number: 1 (lower is better)
Translates to: HRQFPQGHKCGSSVW*NTVVLLDHHLGSTR
Trigger: CCTTGTAGACCCCAGGTGGTGGTCCAACAGGACCACTGTATTTCACCACACGCTACTTCCACATTTGTGGCCTTGGGGGAACTGTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp GCGAAGCAGTGTTTACGTGGCCCTTCGCCTTCTTCCTCCTGGAGGTaGCTCATGCCCTCTGTCCTCTCTCAGTCTTTTCTGTTATCTAAG +
Preference number: 1 (lower is better)
Translates to: AKQCLRGPSPSSSWR*LMPSVLSQSFLLSK
Trigger: CTTAGATAACAGAAAAGACTGAGAGAGGACAGAGGGCATGAGGCACCTCCAGGAGGAAGAAGGCGAAGGGCCACGTAAACACTGCTTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp CACAGCCTCTCCTTCTGCCAGAGCTCACAGGGAATGACAAATCTCTaGGGGAATACACCAGAGCATCTGGATGTGGGTGTCATCGTCTCT +
Preference number: 1 (lower is better)
Translates to: HSLSFCQSSQGMTNL*GNTPEHLDVGVIVS
Trigger: AGAGACGATGACACCCACATCCAGATGCTCTGGTGTATTCCCTCAGAGATTTGTCATTCCCTGTGAGCTCTGGCAGAAGGAGAGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp TCACCCCCTTACACACGTGCGCTCACACACACGCTCACACACATGTaGACAGGCACACACACGCATCAGTCATTGTGGCTAAGTGTAATT +
Preference number: 1 (lower is better)
Translates to: SPPYTRALTHTLTHM*TGTHTHQSLWLSVI
Trigger: AATTACACTTAGCCACAATGACTGATGCGTGTGTGTGCCTGTGCACATGTGTGTGAGCGTGTGTGTGAGCGCACGTGTGTAAGGGGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp GCCACAAATGTGGAAGTAGCGTGTGGTGAAATACAGTGGTCCTGTTaGACCACCACCTGGGGTCTACAAGGCTGTGTGATTAGTGAGCCA +
Preference number: 1 (lower is better)
Translates to: ATNVEVACGEIQWSC*TTTWGLQGCVISEP
Trigger: TGGCTCACTAATCACACAGCCTTGTAGACCCCAGGTGGTGGTCCAACAGGACCACTGTATTTCACCACACGCTACTTCCACATTTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp AGCCACAACCCTGGCAATTCCTTTCCTCTTGCTCTTACAGAAACCTaGCTCCTCTTTGAGGACCCTGAATCACTCCCAGGTGGTGAGCAT +
Preference number: 1 (lower is better)
Translates to: SHNPGNSFPLALTET*LLFEDPESLPGGEH
Trigger: ATGCTCACCACCTGGGAGTGATTCAGGGTCCTCAAAGAGGAGCCAGGTTTCTGTAAGAGCAAGAGGAAAGGAATTGCCAGGGTTGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp ATACTCTCCTCCTCCCTCATTGGCCTCCCGGCTCTTCCTCAAGTTTaGCAAGCATTTGGTTTGACAGCAGGGCCTTTGCAATTGCTTTCT +
Preference number: 1 (lower is better)
Translates to: ILSSSLIGLPALPQV*QAFGLTAGPLQLLS
Trigger: AGAAAGCAATTGCAAAGGCCCTGCTGTCAAACCAAATGCTTGGCAAACTTGAGGAAGAGCCGGGAGGCCAATGAGGGAGGAGGAGAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp TATTGCAAGAGCTTCCTAACCGGTCTTTCAGCCGCTTCCATTGTCTaGCCTCTCAGGGTATACTCTCAACACAGCAGTCCCAAAGCTTCC +
Preference number: 1 (lower is better)
Translates to: YCKSFLTGLSAASIV*PLRVYSQHSSPKAS
Trigger: GGAAGCTTTGGGACTGCTGTGTTGAGAGTATACCCTGAGAGGGCAGACAATGGAAGCGGCTGAAAGACCGGTTAGGAAGCTCTTGCAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp ATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTACACACGTaGGCTCACACACACGCTCACACACATGTGCACAGGCACACACAC +
Preference number: 1 (lower is better)
Translates to: IVDAYHVSIITPLHT*AHTHAHTHVHRHTH
Trigger: GTGTGTGTGCCTGTGCACATGTGTGTGAGCGTGTGTGTGAGCGCACGTGTGTAAGGGGGTGATGATGGAAACATGATATGCATCCACTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp CTCCCTCATTGGCCTCCCGGCTCTTCCTCAAGTTTGCCAAGCATTTaGTTTGACAGCAGGGCCTTTGCAATTGCTTTCTCTTTGCCTTTG +
Preference number: 1 (lower is better)
Translates to: LPHWPPGSSSSLPSI*FDSRAFAIAFSLPL
Trigger: CAAAGGCAAAGAGAAAGCAATTGCAAAGGCCCTGCTGTCAAACCAAATGCTTGGCAAACTTGAGGAAGAGCCGGGAGGCCAATGAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp TTACCCATTAACCACTCCTCCCATTGCTGGTCCCTTCTCATCTCCTaGAGCTTTGAACAATCCTCCACCCTGGGCCTCAGTCTAGAGAAT +
Preference number: 1 (lower is better)
Translates to: LPINHSSHCWSLLIS*SFEQSSTLGLSLEN
Trigger: ATTCTCTAGACTGAGGCCCAGGGTGGAGGATTGTTCAAAGCTCCAGGAGATGAGAAGGGACCAGCAATGGGAGGAGTGGTTAATGGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp ACGCTCACACACATGTGCACAGGCACACACACGCATCAGTCATTGTaGCTAAGTGTAATTCTGATGCTGTTGGAGCACTGGCTCCTGTCA +
Preference number: 1 (lower is better)
Translates to: TLTHMCTGTHTHQSL*LSVILMLLEHWLLS
Trigger: TGACAGGAGCCAGTGCTCCAACAGCATCAGAATTACACTTAGCCACAATGACTGATGCGTGTGTGTGCCTGTGCACATGTGTGTGAGCGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp TACAGTGGTCCTGTTGGACCACCACCTGGGGTCTACAAGGCTGTGTaGTTAGTGAGCCAGAACTGTGACAAGGTTCTTTTGGTGCTGAAA +
Preference number: 1 (lower is better)
Translates to: YSGPVGPPPGVYKAV*LVSQNCDKVLLVLK
Trigger: TTTCAGCACCAAAAGAACCTTGTCACAGTTCTGGCTCACTAATCACACAGCCTTGTAGACCCCAGGTGGTGGTCCAACAGGACCACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp CTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGCAGCTaGAGTGAAAGGACAGTACGAGCTCCAAGAGTTTCTTCAGAGGGA +
Preference number: 1 (lower is better)
Translates to: LAGRRNENIIGYQSS*SERTVRAPRVSSEG
Trigger: TCCCTCTGAAGAAACTCTTGGAGCTCGTACTGTCCTTTCACTTCAGCTGCTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp CCCCCGATGAATATAGGTGTAGCAGAAGACAGGGAGTGGTCATCTTaGGGGAATAAGATGCTCCAAATACTCATCAGCTGTTGGCCCTGT +
Preference number: 1 (lower is better)
Translates to: PPMNIGVAEDREWSS*GNKMLQILISCWPC
Trigger: ACAGGGCCAACAGCTGATGAGTATTTGGAGCATCTTATTCCCCCAAGATGACCACTCCCTGTCTTCTGCTACACCTATATTCATCGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp CCCCTCAATCACAACATGGCTGTGGCCAGTGCAGGGAAATACATATaGAGGATGTTTCCCAAGTTCTGGCTGAGGATACACAGTGACAGA +
Preference number: 1 (lower is better)
Translates to: PLNHNMAVASAGKYI*RMFPKFWLRIHSDR
Trigger: TCTGTCACTGTGTATCCTCAGCCAGAACTTGGGAAACATCCTTCATATGTATTTCCCTGCACTGGCCACAGCCATGTTGTGATTGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp CTCCCATCTCAGCTCATTTCCCTTCCTTTACCAACTCCCAAATCCTaGCTAAGAATCAGTGGTTCATCACCAGCCACAACCCTGGCAATT +
Preference number: 1 (lower is better)
Translates to: LPSQLISLPLPTPKS*LRISGSSPATTLAI
Trigger: AATTGCCAGGGTTGTGGCTGGTGATGAACCACTGATTCTTAGGCAGGATTTGGGAGTTGGTAAAGGAAGGGAAATGAGCTGAGATGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp TTCAAATCAAGTGTTCAGGGTAGGTTCTACCTTCCTAGTGATGTATaGAGGGGAAGAGTGTCAATCCTGGGACAGCCAAGGAGGCTCATC +
Preference number: 1 (lower is better)
Translates to: FKSSVQGRFYLPSDV*RGRVSILGQPRRLI
Trigger: GATGAGCCTCCTTGGCTGTCCCAGGATTGACACTCTTCCCCTGCATACATCACTAGGAAGGTAGAACCTACCCTGAACACTTGATTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp GAAGTTCTATTTGTCTGGTTAACCCAAGGCCAGATTATGAACACCTaGCTCGAGGCCAGTAGCACCTTCCTGATGGCAGTAATGAGGACA +
Preference number: 1 (lower is better)
Translates to: EVLFVWLTQGQIMNT*LEASSTFLMAVMRT
Trigger: TGTCCTCATTACTGCCATCAGGAAGGTGCTACTGGCCTCGAGCCAGGTGTTCATAATCTGGCCTTGGGTTAACCAGACAAATAGAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp CATCAGTCATTGTGGCTAAGTGTAATTCTGATGCTGTTGGAGCACTaGCTCCTGTCACGTGGAGGAAAAGAGATTTCCCCTAGGGACAAG +
Preference number: 1 (lower is better)
Translates to: HQSLWLSVILMLLEH*LLSRGGKEISPRDK
Trigger: CTTGTCCCTAGGGGAAATCTCTTTTCCTCCACGTGACAGGAGCCAGTGCTCCAACAGCATCAGAATTACACTTAGCCACAATGACTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp TATGACCATGCTGAAGGGTTTGCCTTTATTAGTGGACAGAGAGGCTaGACCAGCAGCAGCAGTAGTTGTGATCTCATTCACACCCTGTTC +
Preference number: 1 (lower is better)
Translates to: YDHAEGFAFISGQRG*TSSSSSCDLIHTLF
Trigger: GAACAGGGTGTGAATGAGATCACAACTACTGCTGCTGCTGGTTCAGCCTCTCTGTCCACTAATAAAGGCAAACCCTTCAGCATGGTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp CACAGGTGCTCTGAGCTAATCCATTTAAGAGATTCCAGGTGTGGGTaGGGCAGGCTGTATAAAGAACAGACACTTGGCATAGTCTCAGGA +
Preference number: 1 (lower is better)
Translates to: HRCSELIHLRDSRCG*GRLYKEQTLGIVSG
Trigger: TCCTGAGACTATGCCAAGTGTCTGTTCTTTATACAGCCTGCCTCACCCACACCTGGAATCTCTTAAATGGATTAGCTCAGAGCACCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp TCTCCCATTTCCAAGTCTCTTCCCCTCTTTTCGTACCTCCAGAGCTaGACTCATGGAGTGCAGCTCATTTCTCTTAAAGGTCAAGCTCAT +
Preference number: 1 (lower is better)
Translates to: SPISKSLPLFSYLQS*THGVQLISLKGQAH
Trigger: ATGAGCTTGACCTTTAAGAGAAATGAGCTGCACTCCATGAGTGCAGCTCTGGAGGTACGAAAAGAGGGGAAGAGACTTGGAAATGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp GCAGTAATGAGGACAAGGCAAATAAAGAGCCGCTATTGGCACCATTaGTCACATACCCACCCTCCCACGTCTAAACCTAACTTCAGCAAT +
Preference number: 1 (lower is better)
Translates to: AVMRTRQIKSRYWHH*SHTHPPTSKPNFSN
Trigger: ATTGCTGAAGTTAGGTTTAGACGTGGGAGGGTGGGTATGTGAGCAATGGTGCCAATAGCGGCTCTTTATTTGCCTTGTCCTCATTACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp AGAGTTCCACCTCCACCTAGATGCTTCACTATCCTCCTTGCTTCCTaGCTATGTGAAACCTTGATATTTTTCTTGCTCCTGACCCTGGGA +
Preference number: 1 (lower is better)
Translates to: RVPPPPRCFTILLAS*LCETLIFFLLLTLG
Trigger: TCCCAGGGTCAGGAGCAAGAAAAATATCAAGGTTTCACATAGGCAGGAAGCAAGGAGGATAGTGAAGCATCTAGGTGGAGGTGGAACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp ACTCCGAGTTTCATTAATCTATGGCACTTTGTCCCTCCTCTCCCCTaGGGCCTAACTCCCAAATCCCCTTCAGCTATAGTGAAATACACA +
Preference number: 1 (lower is better)
Translates to: TPSFINLWHFVPPLP*GLTPKSPSAIVKYT
Trigger: TGTGTATTTCACTATAGCTGAAGGGGATTTGGGAGTTAGGCCGCAGGGGAGAGGAGGGACAAAGTGCCATAGATTAATGAAACTCGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp CAAGCATTTGGTTTGACAGCAGGGCCTTTGCAATTGCTTTCTCTTTaGCTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCC +
Preference number: 1 (lower is better)
Translates to: QAFGLTAGPLQLLSL*LCIESPKSHSLISS
Trigger: GGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAGGCAAAGAGAAAGCAATTGCAAAGGCCCTGCTGTCAAACCAAATGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp GCTAACATCATGGCCCAAGCAACTATGATCTCTTACCAGGATTATTaGAAGAGCTTCCTAACCGGTCTTTCAGCCGCTTCCATTGTCTGC +
Preference number: 1 (lower is better)
Translates to: ANIMAQATMISYQDY*KSFLTGLSAASIVC
Trigger: GCAGACAATGGAAGCGGCTGAAAGACCGGTTAGGAAGCTCTTGCAATAATCCTGGTAAGAGATCATAGTTGCTTGGGCCATGATGTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp TTACATTCCACCCCTAGGCTCAGTGGGAAAGAGTTTAAGTTCATGTaGATCTTGCTGTTCCGGAGCAAGCTCTGGGCTCTAAAATTGAGC +
Preference number: 1 (lower is better)
Translates to: LHSTPRLSGKEFKFM*ILLFRSKLWALKLS
Trigger: GCTCAATTTTAGAGCCCAGAGCTTGCTCCGGAACAGCAAGATCCACATGAACTTAAACTCTTTCCCACTGAGCCTAGGGGTGGAATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp CATTTCCCTTCCTTTACCAACTCCCAAATCCTGCCTAAGAATCAGTaGTTCATCACCAGCCACAACCCTGGCAATTCCTTTCCTCTTGCT +
Preference number: 1 (lower is better)
Translates to: HFPSFTNSQILPKNQ*FITSHNPGNSFPLA
Trigger: AGCAAGAGGAAAGGAATTGCCAGGGTTGTGGCTGGTGATGAACCACTGATTCTTAGGCAGGATTTGGGAGTTGGTAAAGGAAGGGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp TGCTTCTCCTCCATGAAGAGCTCCTTAAACAGGAGGAAAAGTCTCTaGCACCCAAGTGAAGAAAGCAAAAGCTCTGCTGTAGTGTGTAGC +
Preference number: 1 (lower is better)
Translates to: CFSSMKSSLNRRKSL*HPSEESKSSAVVCS
Trigger: GCTACACACTACAGCAGAGCTTTTGCTTTCTTCACTTGGGTGTCAGAGACTTTTCCTCCTGTTTAAGGAGCTCTTCATGGAGGAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp GTGGGTAAATACAGGGTTAGACCAAAGAGGGAATTCAATGAGGCCTaGTGGATTTATGGACCAGAACAACAGAGGGGTCTTGAAGGAAGG +
Preference number: 1 (lower is better)
Translates to: VGKYRVRPKREFNEA*WIYGPEQQRGLEGR
Trigger: CCTTCCTTCAAGACCCCTCTGTTGTTCTGGTCCATAAATCCATCAGGCCTCATTGAATTCCCTCTTTGGTCTAACCCTGTATTTACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp TTTGGTCCATTTATTGGCCCAAATGAGATTCATGAACGTCCTTCATaGGGATGGCTGTCTTCCTACCCTCCCACCAGCTGTTTACCAGAT +
Preference number: 1 (lower is better)
Translates to: FGPFIGPNEIHERPS*GWLSSYPPTSCLPD
Trigger: ATCTGGTAAACAGCTGGTGGGAGGGTAGGAAGACAGCCATCCTCATGAAGGACGTTCATGAATCTCATTTGGGCCAATAAATGGACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp ACCCTTATTCCTCCCATTGAGAACAGACCTCTCCACCTCTGCTCATaGTGTTTCCAAGAAGAGATGTGGGCACATGTGCGAATATGTATG +
Preference number: 1 (lower is better)
Translates to: TLIPPIENRPLHLCS*CFQEEMWAHVRICM
Trigger: CATACATATTCGCACATGTGCCCACATCTCTTCTTGGAAACATCATGAGCAGAGGTGGAGAGGTCTGTTCTCAATGGGAGGAATAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp CTTTCCGAAGCTATCATTGAAGCCAGTAACCAAGGGGGAACCATGTaGCTCACATGTCAGCTTCTGGCTTTATTGGTGACACAAAAGGAA +
Preference number: 1 (lower is better)
Translates to: LSEAIIEASNQGGTM*LTCQLLALLVTQKE
Trigger: TTCCTTTTGTGTCACCAATAAAGCCAGAAGCTGACATGTGAGGCACATGGTTCCCCCTTGGTTACTGGCTTCAATGATAGCTTCGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp TTTGGTTTGACAGCAGGGCCTTTGCAATTGCTTTCTCTTTGCCTTTaGATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCT +
Preference number: 1 (lower is better)
Translates to: FGLTAGPLQLLSLCL*IESPKSHSLISSKP
Trigger: AGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAGGCAAAGAGAAAGCAATTGCAAAGGCCCTGCTGTCAAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp CGAGAAAGCATGGATTCTGAAGAACATGGGAATATTAGGTGCTCCTaGGGGTATCTGCGGAATCTCACAGTTTTGGATGGATTGGGTGTT +
Preference number: 1 (lower is better)
Translates to: RESMDSEEHGNIRCS*GYLRNLTVLDGLGV
Trigger: AACACCCAATCCATCCAAAACTGTGAGATTCCGCAGATACCCTCAGGAGCACCTAATATTCCCATGTTCTTCAGAATCCATGCTTTCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp TCTTCACGTAGGTTTAAGACTTGCTCTTCTTGGGGATGCAATGAATaGCAAGGGGATGGGATGCAGTTAGCTAAGCATGGTTGGTGTAGT +
Preference number: 1 (lower is better)
Translates to: SSRRFKTCSSWGCNE*QGDGMQLAKHGWCS
Trigger: ACTACACCAACCATGCTTAGCTAACTGCATCCCATCCCCTTGTCATTCATTGCATCCCCAAGAAGAGCAAGTCTTAAACCTACGTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp CAGGGTATACTCTCAACACAGCAGTCCCAAAGCTTCCTCTTCAACTaGAGTCAGATCATATCACTCTATGCTCCGAACCTTCTAGCAACT +
Preference number: 1 (lower is better)
Translates to: QGILSTQQSQSFLFN*SQIISLYAPNLLAT
Trigger: AGTTGCTAGAAGGTTCGGAGCATAGAGTGATATGATCTGACTTCAGTTGAAGAGGAAGCTTTGGGACTGCTGTGTTGAGAGTATACCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp ACAAACCTGGTTAGTCCCCTGAAGCCAGTCCCTCTATGTTTGTATTaGATCCCATGCCCTCTCACTTCATCAAAGACATTACTCCAGCAA +
Preference number: 1 (lower is better)
Translates to: TNLVSPLKPVPLCLY*IPCPLTSSKTLLQQ
Trigger: TTGCTGGAGTAATGTCTTTGATGAAGTGAGAGGGCATGGGATTCAATACAAACATAGAGGGACTGGCTTCAGGGGACTAACCAGGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp AATCATTTGGGATTTTCCCCTCAATCACAACATGGCTGTGGCCAGTaGAGGGAAATACATATGAAGGATGTTTCCCAAGTTCTGGCTGAG +
Preference number: 1 (lower is better)
Translates to: NHLGFSPQSQHGCGQ*REIHMKDVSQVLAE
Trigger: CTCAGCCAGAACTTGGGAAACATCCTTCATATGTATTTCCCTGCACTGGCCACAGCCATGTTGTGATTGAGGGGAAAATCCCAAATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp ACACACCAGAGTGCCAAGGCTCTGAGGAATTCTACTCATCTACTCTaGTTTTCACCTTCAGTTCTTTCAGGAGCCCTTAACCACATAATC +
Preference number: 1 (lower is better)
Translates to: THQSAKALRNSTHLL*FSPSVLSGALNHII
Trigger: GATTATGTGGTTAAGGGCTCCTGAAAGAACTGAAGGTGAAAAGCAGAGTAGATGAGTAGAATTCCTCAGAGCCTTGGCACTCTGGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp CATAAGGTTGCATTCAGGTTCCTCACTCATCTCCGCTTTGGTCCTTaGTCTTTCAAGTTTCCCTACTTTCCGAAGCTATCATTGAAGCCA +
Preference number: 1 (lower is better)
Translates to: HKVAFRFLTHLRFGP*SFKFPYFPKLSLKP
Trigger: TGGCTTCAATGATAGCTTCGGAAAGTAGGGAAACTTGAAAGAGCAAGGACCAAAGCGGAGATGAGTGAGGAACCTGAATGCAACCTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp ACTCCCATTATCCCATTTACCAGCCCACTTGCATCTGTGCCCAAATaGACTATCTCCCTGCTATTAATACAAACAAACCTGGTTAGTCCC +
Preference number: 1 (lower is better)
Translates to: TPIIPFTSPLASVPK*TISLLLIQTNLVSP
Trigger: GGGACTAACCAGGTTTGTTTGTATTAATAGCAGGGAGATAGTGCATTTGGGCACAGATGCAAGTGGGCTGGTAAATGGGATAATGGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp CATAACGTACTTTCCAGTTTGTTCAAGAATCCACTCTGCCACCAATaGCCTTTTGTTCTGTTCACCACCACTATCGAGTCTCATGGGGTT +
Preference number: 1 (lower is better)
Translates to: HNVLSSLFKNPLCHQ*PFVLFTTTIESHGV
Trigger: AACCCCATGAGACTCGATAGTGGTGGTGAACAGAACAAAAGGTCATTGGTGGCAGAGTGGATTCTTGAACAAACTGGAAAGTACGTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp CTGGAAAGTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTaGGGACTTGTTTATGTACCTTGTTCTTGCAGGATTGCTCACCGC +
Preference number: 1 (lower is better)
Translates to: LESSWFKLVETIANH*GLVYVPCSCRIAHR
Trigger: GCGGTGAGCAATCCTGCAAGAACAAGGTACATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAACTTTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp GGAGCCCTTAACCACATAATCACCCCAGCAATTATATTCAAAGCATaGAGCAGCTCCAGAAACTCACTGTACAGAGCTCTTGAGAGATGT +
Preference number: 1 (lower is better)
Translates to: GALNHIITPAIIFKA*SSSRNSLYRALERC
Trigger: ACATCTCTCAAGAGCTCTGTACAGTGAGTTTCTGGAGCTGCTTCATGCTTTGAATATAATTGCTGGGGTGATTATGTGGTTAAGGGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp AAAGGACAGTACGAGCTCCAAGAGTTTCTTCAGAGGGACAGAGACTaGCACTGGCTAGAAAGAATGATTGATAGATTGCTAAGTAGAGCC +
Preference number: 1 (lower is better)
Translates to: KGQYELQEFLQRDRD*HWLERMIDRLLSRA
Trigger: GGCTCTACTTAGCAATCTATCAATCATTCTTTCTAGCCAGTGTCAGTCTCTGTCCCTCTGAAGAAACTCTTGGAGCTCGTACTGTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp AGAATAGGGATTCTCAAGGAATTCTCCTACCCTTATTCCTCCCATTaGGAACAGACCTCTCCACCTCTGCTCATGATGTTTCCAAGAAGA +
Preference number: 1 (lower is better)
Translates to: RIGILKEFSYPYSSH*EQTSPPLLMMFPRR
Trigger: TCTTCTTGGAAACATCATGAGCAGAGGTGGAGAGGTCTGTTCTCAATGGGAGGAATAAGGGTAGGAGAATTCCTTGAGAATCCCTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp CATCTGCATTTTCCCAGGAGACTTCTCTCCACATTGTCGCAGTGTTaGAACTCTGAGATAAGAATTCCTTGCCCATCTTCTAACTTCCAC +
Preference number: 1 (lower is better)
Translates to: HLHFPRRLLSTLSQC*NSEIRIPCPSSNFH
Trigger: GTGGAAGTTAGAAGATGGGCAAGGAATTCTTATCTCAGAGTTTCAACACTGCGACAATGTGGAGAGAAGTCTCCTGGGAAAATGCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp TGGATTCTGAAGAACATGGGAATATTAGGTGCTCCTGAGGGTATCTaGGGAATCTCACAGTTTTGGATGGATTGGGTGTTGTTTCATACC +
Preference number: 1 (lower is better)
Translates to: WILKNMGILGAPEGI*GISQFWMDWVLFHT
Trigger: GGTATGAAACAACACCCAATCCATCCAAAACTGTGAGATTCCGCAGATACCCTCAGGAGCACCTAATATTCCCATGTTCTTCAGAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp TATCTATATAATTCCCATATCCTGGCCTCTCAGTTCCTTGACCCCTaGTCCTTCTATAACCTTTTCCTCTATCTTATCTCAGCCCACCAC +
Preference number: 1 (lower is better)
Translates to: YLYNSHILASQFLDP*SFYNLFLYLISAHH
Trigger: GTGGTGGGCTGAGATAAGATAGAGGAAAAGGTTATAGAAGGAGCAGGGGTCAAGGAACTGAGAGGCCAGGATATGGGAATTATATAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp CTCATTTCTCTTAACTGTCTGCTCTGTAGCAGTTGTAATCAGTTTTaGGGGGAAGAAGCCTGCTCGTCTAGCTTCAGGTTAAGTAAGAAG +
Preference number: 1 (lower is better)
Translates to: LISLNCLLCSSCNQF*GEEACSSSFRLSKK
Trigger: CTTCTTACTTAACCTGAAGCTAGACGAGCAGGCTTCTTCCCCCCAAAACTGATTACAACTGCTACAGAGCAGACAGTTAAGAGAAATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp TTCCTCTCATCAACATACAAACTTCAAGAGGGTATGGACTTTGTGTaGTTCGTTCTTATATTCCAGCACCTAGAACAGCCTGGCATGGGT +
Preference number: 1 (lower is better)
Translates to: FLSSTYKLQEGMDFV*FVLIFQHLEQPGMG
Trigger: ACCCATGCCAGGCTGTTCTAGGTGCTGGAATATAAGAACGAACCACACAAAGTCCATACCCTCTTGAAGTTTGTATGTTGATGAGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp AATCATAAAATGGTGCTTCCGTTATGTCCATTCTTCAGCTCCAAATaGAAGAGGAAAGAGGTCCTGGAGTTCCAAAGGGTGACTGTCTGT +
Preference number: 1 (lower is better)
Translates to: NHKMVLPLCPFFSSK*KRKEVLEFQRVTVC
Trigger: ACAGACAGTCACCCTTTGGAACTCCAGGACCTCTTTCCTCTTCCATTTGGAGCTGAAGAATGGACATAACGGAAGCACCATTTTATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp CGGTTTCCCTTTAGCCTTCCTGGAAAGTTCTTGGTTCAAACTGGTTaGAACAATTGCCAACCACTGAGGACTTGTTTATGTACCTTGTTC +
Preference number: 1 (lower is better)
Translates to: RFPFSLPGKFLVQTG*NNCQPLRTCLCTLF
Trigger: GAACAAGGTACATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAACTTTCCAGGAAGGCTAAAGGGAAACCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp GTCAGATTATTGTCAGTGGAAATGCTGAGATTTAAGCATTGCCACTaGAAGGAGTTCATACAGGACCACACTCACCAACCACTTCTGCAA +
Preference number: 1 (lower is better)
Translates to: VRLLSVEMLRFKHCH*KEFIQDHTHQPLLQ
Trigger: TTGCAGAAGTGGTTGGTGAGTGTGGTCCTGTATGAACTCCTTTCAGTGGCAATGCTTAAATCTCAGCATTTCCACTGACAATAATCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp CGACTCAGGCAAATTCAAGGGTCAGATTATTGTCAGTGGAAATGCTaGGATTTAAGCATTGCCACTGAAAGGAGTTCATACAGGACCACA +
Preference number: 1 (lower is better)
Translates to: RLRQIQGSDYCQWKC*DLSIATERSSYRTT
Trigger: TGTGGTCCTGTATGAACTCCTTTCAGTGGCAATGCTTAAATCTCAGCATTTCCACTGACAATAATCTGACCCTTGAATTTGCCTGAGTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp ACCTTCTCCAAAACACAGATTCTACACACCAGAGTGCCAAGGCTCTaGGGAATTCTACTCATCTACTCTGCTTTTCACCTTCAGTTCTTT +
Preference number: 1 (lower is better)
Translates to: TFSKTQILHTRVPRL*GILLIYSAFHLQFF
Trigger: AAAGAACTGAAGGTGAAAAGCAGAGTAGATGAGTAGAATTCCTCAGAGCCTTGGCACTCTGGTGTGTAGAATCTGTGTTTTGGAGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp GCTCCTGACCCTGGGAGAGAGAGAACAGATAAATTATTGAATCCGTaGAGGCATTTATCCCTATTCCTTGAGAATAGGGATTCTCAAGGA +
Preference number: 1 (lower is better)
Translates to: APDPGRERTDKLLNP*RHLSLFLENRDSQG
Trigger: TCCTTGAGAATCCCTATTCTCAAGGAATAGGGATAAATGCCTTCACGGATTCAATAATTTATCTGTTCTCTCTCTCCCAGGGTCAGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp TTCCAGAAGGATGAAGGGAGACACAGCCAAAATTCAGGTAATACATaGCCATCTCTGTCTGTATATAAGCCAAACAATCACACTGCTTGG +
Preference number: 1 (lower is better)
Translates to: FQKDEGRHSQNSGNT*PSLSVYKPNNHTAW
Trigger: CCAAGCAGTGTGATTGTTTGGCTTATATACAGACAGAGATGGCCATGTATTACCTGAATTTTGGCTGTGTCTCCCTTCATCCTTCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp CATGTATTTCCTATATGGCTTTGGGCTCAGAGAGCACATAAGGTATaGCCACAGTCCCTGGAAATGCTGAATGCATTCATCAATATCACT +
Preference number: 1 (lower is better)
Translates to: HVFPIWLWAQRAHKV*PQSLEMLNAFINIT
Trigger: AGTGATATTGATGAATGCATTCAGCATTTCCAGGGACTGTGGCCATACCTTATGTGCTCTCTGAGCCCAAAGCCATATAGGAAATACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp ACATATGAAATAAACACCATCTTGATTTCTGTTGCCAGCGGAGACTaGAAGAGCTCCCTTGGTTCTAGATTGCTGTTCGCTAGGTTAGTT +
Preference number: 1 (lower is better)
Translates to: TYEINTILISVASGD*KSSLGSRLLFARLV
Trigger: AACTAACCTAGCGAACAGCAATCTAGAACCAAGGGAGCTCTTTCAGTCTCCGCTGGCAACAGAAATCAAGATGGTGTTTATTTCATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp ATATGGCTTAATATGTCACCTTTCCTGGGATTACTTTCATTCGAATaGCAGACAGCTCAGCTCAGTGCTAAAGCAACAAATCTGTGTGGG +
Preference number: 1 (lower is better)
Translates to: IWLNMSPFLGLLSFE*QTAQLSAKATNLCG
Trigger: CCCACACAGATTTGTTGCTTTAGCACTGAGCTGAGCTGTCTGTCATTCGAATGAAAGTAATCCCAGGAAAGGTGACATATTAAGCCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp CTCAGTGCCTCTTTACATGGGAATAAGCTAAAAATGCTCGAGAAATaGCTCTTCAGATTTCTATGTGACCCATTTCTCGTGCCTGTTACC +
Preference number: 1 (lower is better)
Translates to: LSASLHGNKLKMLEK*LFRFLCDPFLVPVT
Trigger: GGTAACAGGCACGAGAAATGGGTCACATAGAAATCTGAAGAGTCATTTCTCGAGCATTTTTAGCTTATTCCCATGTAAAGAGGCACTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp TTAATGGAATCATTTGGGATTTTCCCCTCAATCACAACATGGCTGTaGCCAGTGCAGGGAAATACATATGAAGGATGTTTCCCAAGTTCT +
Preference number: 1 (lower is better)
Translates to: LMESFGIFPSITTWL*PVQGNTYEGCFPSS
Trigger: AGAACTTGGGAAACATCCTTCATATGTATTTCCCTGCACTGGCCACAGCCATGTTGTGATTGAGGGGAAAATCCCAAATGATTCCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp CAACATTTAATGGAATCATTTGGGATTTTCCCCTCAATCACAACATaGCTGTGGCCAGTGCAGGGAAATACATATGAAGGATGTTTCCCA +
Preference number: 1 (lower is better)
Translates to: QHLMESFGIFPSITT*LWPVQGNTYEGCFP
Trigger: TGGGAAACATCCTTCATATGTATTTCCCTGCACTGGCCACAGCCATGTTGTGATTGAGGGGAAAATCCCAAATGATTCCATTAAATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp AGAAGCATTAAGATAAGGAGAAGAGGGTCAAGCTCAGATATACCATaGCAAGTCAATGCTAAGGAGATAAGAGGAAGAGCAGGAACCAAT +
Preference number: 1 (lower is better)
Translates to: RSIKIRRRGSSSDIP*QVNAKEIRGRAGTN
Trigger: ATTGGTTCCTGCTCTTCCTCTTATCTCCTTAGCATTGACTTGCCATGGTATATCTGAGCTTGACCCTCTTCTCCTTATCTTAATGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp GAGATAAGAATTCCTTGCCCATCTTCTAACTTCCACCCAGATATCTaGCTTCTGTCAATAGGCCTTACCCAAACAGGGTTATGTATATGT +
Preference number: 1 (lower is better)
Translates to: EIRIPCPSSNFHPDI*LLSIGLTQTGLCIC
Trigger: ACATATACATAACCCTGTTTGGGTAAGGCCTATTGACAGAAGCCAGATATCTGGGTGGAAGTTAGAAGATGGGCAAGGAATTCTTATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp GAACAGGTGGGTTGTAAGAGAAGGTTGTTGCAAGATTCTCTGATCTaGGGGTGCTTAATAAATAATTCACCATTGCAACCTTGTGACAAA +
Preference number: 1 (lower is better)
Translates to: EQVGCKRRLLQDSLI*GCLINNSPLQPCDK
Trigger: TTTGTCACAAGGTTGCAATGGTGAATTATTTATTAAGCACCCGCAGATCAGAGAATCTTGCAACAACCTTCTCTTACAACCCACCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp TGGAGTGTGTGTGTGTCTACAAAGGGAAATTTCATAGATAAGATCTaGCTAAATCAGCTGCCTAGATTTCGTGACTTTTCTCCACTGCTA +
Preference number: 1 (lower is better)
Translates to: WSVCVSTKGNFIDKI*LNQLPRFRDFSPLL
Trigger: TAGCAGTGGAGAAAAGTCACGAAATCTAGGCAGCTGATTTAGCCAGATCTTATCTATGAAATTTCCCTTTGTAGACACACACACACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp AGGAAGTTCTGGCACTCACCCTTGTCATTGGAGTCTTTGTTTTATTaGAGGTGTTGTGATCATGATCAAAGCTTTCATGATATCCTACTG +
Preference number: 1 (lower is better)
Translates to: RKFWHSPLSLESLFY*RCCDHDQSFHDILL
Trigger: CAGTAGGATATCATGAAAGCTTTGATCATGATCACAACACCTTCAATAAAACAAAGACTCCAATGACAAGGGTGAGTGCCAGAACTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp GTGGGTTGTAAGAGAAGGTTGTTGCAAGATTCTCTGATCTGCGGGTaGTTAATAAATAATTCACCATTGCAACCTTGTGACAAAATCAAG +
Preference number: 1 (lower is better)
Translates to: VGCKRRLLQDSLICG*LINNSPLQPCDKIK
Trigger: CTTGATTTTGTCACAAGGTTGCAATGGTGAATTATTTATTAAGCACCCGCAGATCAGAGAATCTTGCAACAACCTTCTCTTACAACCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp TCTCACTCCCTCATTTCCTCCAAACCTTTACTTAAATGTCATCTTTaGTTACTCAAAAATAGCAACCCCACACCCATCCTATCATCTATC +
Preference number: 1 (lower is better)
Translates to: SHSLISSKPLLKCHL*LLKNSNPTPILSSI
Trigger: GATAGATGATAGGATGGGTGTGGGGTTGCTATTTTTGAGTAAGCAAAGATGACATTTAAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp TTTCTCAGGATTGAGCTTCCTGAAACCTTTCAGTCACGCCAAGAATaGGAAGTTAATTTGACCTTAATTCTGTTTAAGCCCTTTTGGGAA +
Preference number: 1 (lower is better)
Translates to: FLRIELPETFQSRQE*EVNLTLILFKPFWE
Trigger: TTCCCAAAAGGGCTTAAACAGAATTAAGGTCAAATTAACTTCCCATTCTTGGCGTGACTGAAAGGTTTCAGGAAGCTCAATCCTGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp ATGAAAAAGATGAAGTCACCACGGAGTCAAGGTAGAAATAGCTACTaGCCCTCTCTCTTAGCTTACTATGATAACACGATTTTATGTGAA +
Preference number: 1 (lower is better)
Translates to: MKKMKSPRSQGRNSY*PSLLAYYDNTILCE
Trigger: TTCACATAAAATCGTGTTATCATAGTAAGCTAAGAGAGAGGGGCAGTAGCTATTTCTACCTTGACTCCGTGGTGACTTCATCTTTTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp GTGATACCATTAAGCAAAAGGAGGAAGTTGGTGATTATGTTGGTTTaGAGCAATGGTTTTGGATATTTGAGTCAAGATGAAGTTGAGTGT +
Preference number: 1 (lower is better)
Translates to: VIPLSKRRKLVIMLV*SNGFGYLSQDEVEC
Trigger: ACACTCAACTTCATCTTGACTCAAATATCCAAAACCATTGCTGCAAACCAACATAATCACCAACTTCCTCCTTTTGCTTAATGGTATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 90 bp ATACAAGCTCTACCCAAAGCATCTGAAAAGCTGATACCTAAAATTTaGTCAATATCCTTCATAGTTTCTCCCTCTGTCACTTACTTGAAC +
Preference number: 1 (lower is better)
Translates to: IQALPKASEKLIPKI*SISFIVSPSVTYLN
Trigger: GTTCAAGTAAGTGACAGAGGGAGAAACTATGAAGGATATTGATCAAATTTTAGGTATCAGCTTTTCAGATGCTTTGGGTAGAGCTTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 90 bp TTCAGGCTATACATTTTCCCTGAACTCCAGGTCCATATATCTAATTaGCTAATCATCATTTCTACTTGCAACATCTGTAGACACCTTAAA +
Preference number: 1 (lower is better)
Translates to: FRLYIFPELQVHISN*LIIISTCNICRHLK
Trigger: TTTAAGGTGTCTACAGATGTTGCAAGTAGAAATGATGATTAGGCAATTAGATATATGGACCTGGAGTTCAGGGAAAATGTATAGCCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp TTTGCTTTCTTCTTGCTCTTTTTGACTTGTCTCTGTAGATGTATGTaGAGTGTGTGTGTGTCTACAAAGGGAAATTTCATAGATAAGATC +
Preference number: 1 (lower is better)
Translates to: FAFFLLFLTCLCRCM*SVCVSTKGNFIDKI
Trigger: GATCTTATCTATGAAATTTCCCTTTGTAGACACACACACACTCCACATACATCTACAGAGACAAGTCAAAAAGAGCAAGAAGAAAGCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 90 bp ACATTGTCTTCATTAATATTGGGAAGAACCAGCAAAATCCAACTGTaGGAACCTCTAAAGGATAAAGTGCTCTATTCCTTTAACAAGTAT +
Preference number: 1 (lower is better)
Translates to: TLSSLILGRTSKIQL*EPLKDKVLYSFNKY
Trigger: ATACTTGTTAAAGGAATAGAGCACTTTATCCTTTAGAGGTTCCCACAGTTGGATTTTGCTGGTTCTTCCCAATATTAATGAAGACAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp CTCTTTGAGGACCCTGAATCACTCCCAGGTGGTGAGCATTTCCACTaGCACCTTCCTCATGCCCTGGGGCCTGGAGGTGGAGATGCCCTT +
Preference number: 2 (lower is better)
Translates to: LFEDPESLPGGEHFH*HLPHALGPGGGDAL
Trigger: AAGGGCATCTCCACCTCCAGGCCCCAGGGCATGAGGAAGGTGCAAGTGGAAATGCTCACCACCTGGGAGTGATTCAGGGTCCTCAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp GTGTCAATCCTGGGACAGCCAAGGAGGCTCATCTTTCCGGAACAGTaGGCTGATGGGGACACAACCGGGTGCTCCCTCAGCCTTTCATTA +
Preference number: 2 (lower is better)
Translates to: VSILGQPRRLIFPEQ*ADGDTTGCSLSLSL
Trigger: TAATGAAAGGCTGAGGGAGCACCCGGTTGTGTCCCCATCAGCCAACTGTTCCGGAAAGATGAGCCTCCTTGGCTGTCCCAGGATTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTGGGCCTCGCAGAGCTaGGGCAAGCCTGAGTCGTCG +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSWASQS*GKPESS
Trigger: CGACGACTCAGGCTTGCCTCAGCTCTGCGAGGCCCA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCGGCCCAAAGAGGTGGTaGAGGGTCCCTCTCTGCCCC +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSGPKRW*RVPLCP
Trigger: GGGGCAGAGAGGGACCCTCCACCACCTCTTTGGGCC...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp GGCAATCACCACGAGAAGCCCAAGACCCCCAGTCCCTCTTATCACTaGGACTTTCATCCCCAGATACCCATGCACATCTCCCATCTCAGC +
Preference number: 2 (lower is better)
Translates to: GNHHEKPKTPSPSYH*DFHPQIPMHISHLS
Trigger: GCTGAGATGGGAGATGTGCATGGGTATCTGGGGATGAAAGTCCAAGTGATAAGAGGGACTGGGGGTCTTGGGCTTCTCGTGGTGATTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCTTGCACCTTCCTCATaGCCTGGGGCCTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSLAPSS*PGAWRW
Trigger: CCACCTCCAGGCCCCAGGGCATGAGGAAGGTGCAAG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCAGACCTGGGGCTCTCTaGATGCCACCCTGTGTAGGG +
Preference number: 2 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTRPGAL*MPPCVG
Trigger: CCCTACACAGGGTGGCATCCAGAGAGCCCCAGGTCT...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCCCCGTCACCCTCCGTaGCATGCGCATCACGCGACC +
Preference number: 2 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGPRHPP*HAHHAT
Trigger: GGTCGCGTGATGCGCATGTCACGGAGGGTGACGGGG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTTGGAGGGTCCCTCTCTaGCCCCGTCTCCCATTTCCA +
Preference number: 2 (lower is better)
Translates to: LGSSLETLSTMHVFELCAWRVPL*PRLPFP
Trigger: TGGAAATGGGAGACGGGGGCAGAGAGGGACCCTCCA...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp CATACTCTCCTCCTCCCTCATTGGCCTCCCGGCTCTTCCTCAAGTTaGCCAAGCATTTGGTTTGACAGCAGGGCCTTTGCAATTGCTTTC +
Preference number: 2 (lower is better)
Translates to: HTLLLPHWPPGSSSS*PSIWFDSRAFAIAF
Trigger: GAAAGCAATTGCAAAGGCCCTGCTGTCAAACCAAATGCTTGGCAAACTTGAGGAAGAGCCGGGAGGCCAATGAGGGAGGAGGAGAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp GGTAAAAGCCAAATCCTGACAGTGTCCTACAAGGCCCTACCTGACTaGCGTTATTGCCCCCTCTCTGACCTCACCTCTCATACTCTCCTC +
Preference number: 2 (lower is better)
Translates to: GKSQILTVSYKALPD*RYCPLSDLTSHTLL
Trigger: GAGGAGAGTATGAGAGGTGAGGTCAGAGAGGGGGCAATAACGCAAGTCAGGTAGGGCCTTGTAGGACACTGTCAGGATTTGGCTTTTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp CACACGCTCACACACATGTGCACAGGCACACACACGCATCAGTCATaGTGGCTAAGTGTAATTCTGATGCTGTTGGAGCACTGGCTCCTG +
Preference number: 2 (lower is better)
Translates to: HTLTHMCTGTHTHQS*WLSVILMLLEHWLL
Trigger: CAGGAGCCAGTGCTCCAACAGCATCAGAATTACACTTAGCCACAATGACTGATGCGTGTGTGTGCCTGTGCACATGTGTGTGAGCGTGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGAGGGGATGAGTCCCTaGCCCCTGGACAGAGTCAGG +
Preference number: 2 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVEGMSP*PLDRVR
Trigger: CCTGACTCTGTCCAGGGGTCAGGGACTCATCCCCTC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCTCGTACCTCCAGAGCTaGACTCATGGAGTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: TVELTHRINSPTASFRTGSYLQS*THGVQL
Trigger: GAGCTGCACTCCATGAGTGCAGCTCTGGAGGTACGA...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCAGGGAGCATCAGTTCTaGTGGTACCCTCATCCCTGG +
Preference number: 2 (lower is better)
Translates to: TVELTHRINSPTASFRTGREHQF*WYPHPW
Trigger: CCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTTCTTCCTCCTGGAGGTaGCTCATGCCCTCTGTCCTC +
Preference number: 2 (lower is better)
Translates to: LGSSLETLSTMHVFELCASSSWR*LMPSVL
Trigger: GAGGACAGAGGGCATGAGGCACCTCCAGGAGGAAGA...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp CATGGGGCCAGGTTCCTTGTGGATATCAGGACCTCACACATAAGGTaGCATTCAGGTTCCTCACTCATCTCCGCTTTGGTCCTTGCTCTT +
Preference number: 2 (lower is better)
Translates to: HGARFLVDIRTSHIR*HSGSSLISALVLAL
Trigger: AAGAGCAAGGACCAAAGCGGAGATGAGTGAGGAACCTGAATGCAACCTTATGTGTGAGGTCCTGATATCCACAAGGAACCTGGCCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp CTGGCAATTCCTTTCCTCTTGCTCTTACAGAAACCTGGCTCCTCTTaGAGGACCCTGAATCACTCCCAGGTGGTGAGCATTTCCACTTGC +
Preference number: 2 (lower is better)
Translates to: LAIPFLLLLQKPGSS*RTLNHSQVVSISTC
Trigger: GCAAGTGGAAATGCTCACCACCTGGGAGTGATTCAGGGTCCTCAAAGAGGAGCCAGGTTTCTGTAAGAGCAAGAGGAAAGGAATTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp ACAAGAGCTCACTGCCCCATCCCTTCTCTGATCTCCACTGTAACATaGCCTCTAGCTCCCTTGAAATGTTTCCACAAGCGTCAGGGCTAC +
Preference number: 2 (lower is better)
Translates to: TRAHCPIPSLISTVT*PLAPLKCFHKRQGY
Trigger: GTAGCCCTGACGCTTGTGGAAACATTTCAAGGGAGCTAGAGGCAATGTTACAGTGGAGATCAGAGAAGGGATGGGGCAGTGAGCTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAACAGCCCTGGAGGGAGTaGCTTGAAGAGACATGGCAG +
Preference number: 2 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKQPWRE*LEETWQ
Trigger: CTGCCATGTCTCTTCAAGTCACTCCCTCCAGGGCTG...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCAGTCAAGGGCGGGATaGGGAAGGGTCACGAGTGAG +
Preference number: 2 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVQSRAG*GRVTSE
Trigger: CTCACTCGTGACCCTTCCTCATCCCGCCCTTGACTG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGTCCCTCCTCTCCCCTaGGGCCTAACTCCCAAATCC +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLVPPLP*GLTPKS
Trigger: GGATTTGGGAGTTAGGCCGCAGGGGAGAGGAGGGAC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCTGTGTAGGGGAGGATaGCAGGACAGTGGAACTGAC +
Preference number: 2 (lower is better)
Translates to: LGSSLETLSTMHVFELCALCRGG*QDSGTD
Trigger: GTCAGTTCCACTGTCCTGCCATCCTCCCCTACACAG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCGTCCTGTGTGCAACATaGCGATCCTGCAGTCAAGCT +
Preference number: 2 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTVLCAT*RSCSQA
Trigger: AGCTTGACTGCAGGATCGCCATGTTGCACACAGGAC...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCCCTCAATCACAACATaGCTGTGGCCAGTGCAGGGA +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSPSITT*LWPVQG
Trigger: TCCCTGCACTGGCCACAGCCATGTTGTGATTGAGGG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTGGAGGTGGATGGGCTaGGGATCTGAGAGTCAAGAG +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSWRWMG*GSESQE
Trigger: CTCTTGACTCTCAGATCCCCAGCCCATCCACCTCCA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp TTACTCAGAATGTACCATAGGCTAAGTGTGGTGGAGCCTAATGGGTaGCTGGTTATCCTAGAAACTCCACCATTCCCCAAGGAGGGGAGC +
Preference number: 2 (lower is better)
Translates to: LLRMYHRLSVVEPNG*LVILETPPFPKEGS
Trigger: GCTCCCCTCCTTGGGGAATGGTGGAGTTTCTAGGATAACCAGCAACCCATTAGGCTCCACCACACTTAGCCTATGGTACATTCTGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp ATCAGTGGTTCATCACCAGCCACAACCCTGGCAATTCCTTTCCTCTaGCTCTTACAGAAACCTGGCTCCTCTTTGAGGACCCTGAATCAC +
Preference number: 2 (lower is better)
Translates to: ISGSSPATTLAIPFL*LLQKPGSSLRTLNH
Trigger: GTGATTCAGGGTCCTCAAAGAGGAGCCAGGTTTCTGTAAGAGCAAGAGGAAAGGAATTGCCAGGGTTGTGGCTGGTGATGAACCACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGTCTACCCTCCCCTGCTaGGAGGGCCCATGGCATCAT +
Preference number: 2 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGSTLPC*EGPWHH
Trigger: ATGATGCCATGGGCCCTCTCAGCAGGGGAGGGTAGA...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGAGGAAGATGAGGGGATaGGTCCCTGACCCCTGGACA +
Preference number: 2 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVRKMRG*VPDPWT
Trigger: TGTCCAGGGGTCAGGGACTCATCCCCTCATCTTCCT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGAGGTAAGAGGAAGATaGGGGGATGAGTCCCTGACC +
Preference number: 2 (lower is better)
Translates to: FATQPHSGCISCFHHHPLEVRGR*GDESLT
Trigger: GGTCAGGGACTCATCCCCTCATCTTCCTCTTACCTC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTTGGGTGCTGTAATCTaGAGGACCTGGGCAGGAATG +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSLGAVI*RTWAGM
Trigger: CATTCCTGCCCAGGTCCTTCAGATTACAGCACCCAA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTAGTGGACAGAGAGGCTaGACCAGCAGCAGCAGTAGT +
Preference number: 2 (lower is better)
Translates to: FATQPHSGCISCFHHHPLSGQRG*TSSSSS
Trigger: ACTACTGCTGCTGCTGGTTCAGCCTCTCTGTCCACT...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGGGACAAGAGCTCACTaGCCCATCCCTTCTCTGATC +
Preference number: 2 (lower is better)
Translates to: FATQPHSGCISCFHHHPLGTRAH*PIPSLI
Trigger: GATCAGAGAAGGGATGGGGCAGTGAGCTCTTGTCCC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCGTCCCCAAGGCACCGTaGGACACTATCATAACGTAC +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSVPKAP*DTIITY
Trigger: GTACGTTATGATAGTGTCCCACGGTGCCTTGGGGAC...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGGAGCATCAGTTCTGCTaGTACCCTCATCCCTGGAGT +
Preference number: 2 (lower is better)
Translates to: FTEKAGREKERKHYRLPEEHQFC*YPHPWS
Trigger: ACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTC...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTATCAAGGAGGAGGGTTaGGGACAGCAGTCAAGGGCG +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLIKEEG*GQQSRA
Trigger: CGCCCTTGACTGCTGTCCCCAACCCTCCTCCTTGAT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTTCGCCTTCTTCCTCCTaGAGGTGCCTCATGCCCTCT +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLSPSSS*RCLMPS
Trigger: AGAGGGCATGAGGCACCTCCAGGAGGAAGAAGGCGA...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCAGATTATGAACACCTaGCTCGAGGCCAGTAGCACC +
Preference number: 2 (lower is better)
Translates to: LGSSLETLSTMHVFELCAQIMNT*LEASST
Trigger: GGTGCTACTGGCCTCGAGCCAGGTGTTCATAATCTG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp CGATTGTTTCAGCATCAGAGGAGGCCGCTGGGAGATTTCTCAGGATaGAGCTTCCTGAAACCTTTCAGTCACGCCAAGAATGGGAAGTTA +
Preference number: 2 (lower is better)
Translates to: RLFQHQRRPLGDFSG*SFLKPFSHAKNGKL
Trigger: TAACTTCCCATTCTTGGCGTGACTGAAAGGTTTCAGGAAGCTCAATCCTGAGAAATCTCCCAGCGGCCTCCTCTGATGCTGAAACAATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp CTTCGGAGTATCATGACACCCCTGCACACGTTCCTGAAGGCTCTTTaGCCATGTAGCACTCTGGAAGAAATCCTCTGTCCCAGTTTATTC +
Preference number: 2 (lower is better)
Translates to: LRSIMTPLHTFLKAL*PCSTLEEILCPSLF
Trigger: GAATAAACTGGGACAGAGGATTTCTTCCAGAGTGCTACATGGCAAAAGAGCCTTCAGGAACGTGTGCAGGGGTGTCATGATACTCCGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp CTCATTGGCCTCCCGGCTCTTCCTCAAGTTTGCCAAGCATTTGGTTaGACAGCAGGGCCTTTGCAATTGCTTTCTCTTTGCCTTTGCATA +
Preference number: 2 (lower is better)
Translates to: LIGLPALPQVCQAFG*TAGPLQLLSLCLCI
Trigger: TATGCAAAGGCAAAGAGAAAGCAATTGCAAAGGCCCTGCTGTCAAACCAAATGCTTGGCAAACTTGAGGAAGAGCCGGGAGGCCAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGTTGCCAGCGGAGACTaGAAGAGCTCCCTTGGTTCT +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLVASGD*KSSLGS
Trigger: AGAACCAAGGGAGCTCTTTCAGTCTCCGCTGGCAAC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGTGTGTTTGCCAGGCTaGCTTCTGAGGGTGGAGATG +
Preference number: 2 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVVCLPG*LLRVEM
Trigger: CATCTCCACCCTCAGAAGTCAGCCTGGCAAACACAC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCCCTTGGGCAACTCCTaGTGGCCACGGAAGACCGGG +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEPLGNS*WPRKTG
Trigger: CCCGGTCTTCCGTGGCCATCAGGAGTTGCCCAAGGG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCGTGGTTGGAATGAGTTaGGGGTGGGATGTTCTCAGA +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSVVGMS*GWDVLR
Trigger: TCTGAGAACATCCCACCCTCAACTCATTCCAACCAC...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGGGGCCACTGTGTGACTaGATCAATGTGGTTGGAATG +
Preference number: 2 (lower is better)
Translates to: FTEKAGREKERKHYRLPEGPLCD*INVVGM
Trigger: CATTCCAACCACATTGATTCAGTCACACAGTGGCCC...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCAGAGGGACAGAGACTaGCACTGGCTAGAAAGAATG +
Preference number: 2 (lower is better)
Translates to: LGSSLETLSTMHVFELCAQRDRD*HWLERM
Trigger: CATTCTTTCTAGCCAGTGTCAGTCTCTGTCCCTCTG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGTGCATGAACACACATaGACGCACAATCCACCTGCT +
Preference number: 2 (lower is better)
Translates to: LGSSLETLSTMHVFELCAVHEHT*THNPPA
Trigger: AGCAGGTGGATTGTGCGTGCATGTGTGTTCATGCAC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCGCTATTGGCACCATTaGTCACATACCCACCCTCCC +
Preference number: 2 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVRYWHH*SHTHPP
Trigger: GGGAGGGTGGGTATGTGAGCAATGGTGCCAATAGCG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCAAGAAAGGAGCAAATaGGAACCAAGTTCACCCCCG +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSQERSK*EPSSPP
Trigger: CGGGGGTGAACTTGGTTCCCATTTGCTCCTTTCTTG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCCATGGCATCATCTCATaGGAACAGGAATGGCTGACA +
Preference number: 2 (lower is better)
Translates to: TVELTHRINSPTASFRTGHGIIS*EQEWLT
Trigger: TGTCAGCCATTCCTGTTCCCATGAGATGATGCCATG...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGGCCTGGCCATGACATaGGAAGCTGAATCTCTGCAA +
Preference number: 2 (lower is better)
Translates to: FATQPHSGCISCFHHHPLGLAMT*EAESLQ
Trigger: TTGCAGAGATTCAGCTTCCCATGTCATGGCCAGGCC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTTGTGGTGAAATACAGTaGTCCTGTTGGACCACCACC +
Preference number: 2 (lower is better)
Translates to: LGSSLETLSTMHVFELCACGEIQ*SCWTTT
Trigger: GGTGGTGGTCCAACAGGACCACTGTATTTCACCACA...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp TCCACCCCTAGGCTCAGTGGGAAAGAGTTTAAGTTCATGTGGATCTaGCTGTTCCGGAGCAAGCTCTGGGCTCTAAAATTGAGCTTATCT +
Preference number: 2 (lower is better)
Translates to: STPRLSGKEFKFMWI*LFRSKLWALKLSLS
Trigger: AGATAAGCTCAATTTTAGAGCCCAGAGCTTGCTCCGGAACAGCAAGATCCACATGAACTTAAACTCTTTCCCACTGAGCCTAGGGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp CCTCAAGTTTGCCAAGCATTTGGTTTGACAGCAGGGCCTTTGCAATaGCTTTCTCTTTGCCTTTGCATAGAAAGCCCCAAGTCTCACTCC +
Preference number: 2 (lower is better)
Translates to: PQVCQAFGLTAGPLQ*LSLCLCIESPKSHS
Trigger: GGAGTGAGACTTGGGGCTTTCTATGCAAAGGCAAAGAGAAAGCAATTGCAAAGGCCCTGCTGTCAAACCAAATGCTTGGCAAACTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCCTTATTCCAGAAGGATaGAGGGAGACACAGCCAAAA +
Preference number: 2 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTLIPEG*RETQPK
Trigger: TTTTGGCTGTGTCTCCCTTCATCCTTCTGGAATAAG...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAGATGGGGCAGGGAGTaGGTCAGCGCCCAGGTCCTA +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLERWGRE*VSAQVL
Trigger: TAGGACCTGGGCGCTGACTCACTCCCTGCCCCATCT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGTACATGCATCACTTTaGAGGGTGTGCAAAGTCTCG +
Preference number: 2 (lower is better)
Translates to: LGSSLETLSTMHVFELCAVHASL*RVCKVS
Trigger: CGAGACTTTGCACACCCTTCAAAGTGATGCATGTAC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGAGAGTGCCAAGGCTCTaGGGAATTCTACTCATCTAC +
Preference number: 2 (lower is better)
Translates to: FTEKAGREKERKHYRLPERVPRL*GILLIY
Trigger: GTAGATGAGTAGAATTCCTCAGAGCCTTGGCACTCT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTTTCTTGGGGATGCAATaGATGACAAGGGGATGGGAT +
Preference number: 2 (lower is better)
Translates to: LGSSLETLSTMHVFELCAFLGMQ*MTRGWD
Trigger: ATCCCATCCCCTTGTCATTCATTGCATCCCCAAGAA...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGCCATGAGCATAAGGTaGGGAAGTGGAGAAAGAAAG +
Preference number: 2 (lower is better)
Translates to: LGSSLETLSTMHVFELCAAMSIR*GSGERK
Trigger: CTTTCTTTCTCCACTTCCTCACCTTATGCTCATGGC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCAGTGAGCCAGAACTGTaGCAAGGTTCTTTTGGTGCT +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSSEPEL*QGSFGA
Trigger: AGCACCAAAAGAACCTTGTCACAGTTCTGGCTCACT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGGTTACCAGAGCAGCTaGAGTGAAAGGACAGTACGA +
Preference number: 2 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKGYQSS*SERTVR
Trigger: TCGTACTGTCCTTTCACTTCAGCTGCTCTGGTAACC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTCAGCTGTTGGCCCTGTaGCCTGTTTTTCAGGATCAT +
Preference number: 2 (lower is better)
Translates to: FATQPHSGCISCFHHHPLQLLAL*PVFQDH
Trigger: ATGATCCTGAAAAACAGGTCACAGGGCCAACAGCTG...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTACAGAGGAAATATGGTaGCACCAGCCTGTCTTTGTG +
Preference number: 2 (lower is better)
Translates to: LGSSLETLSTMHVFELCATEEIW*HQPVFV
Trigger: CACAAAGACAGGCTGGTGGCACCATATTTCCTCTGT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCAAGAGTGTTCACTCTaGGCTCAAGTCACATTCCCA +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSQECSL*AQVTFP
Trigger: TGGGAATGTGACTTGAGCCCAGAGTGAACACTCTTG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAGCTTCCACACAGACCTaGGGCTCTCTGGATGCCACC +
Preference number: 2 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLASTQT*GSLDAT
Trigger: GGTGGCATCCAGAGAGCCCCAGGTCTGTGTGGAAGC...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGGATAGGAGTCAGACCTaGGGTTTGCTTAGAGCCAAA +
Preference number: 2 (lower is better)
Translates to: FTEKAGREKERKHYRLPEDRSQT*GLLRAK
Trigger: TTTGGCTCTAAGCAAACCCCAGGTCTGACTCCTATC...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp ATTTGGTTTGACAGCAGGGCCTTTGCAATTGCTTTCTCTTTGCCTTaGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACC +
Preference number: 2 (lower is better)
Translates to: IWFDSRAFAIAFSLP*HRKPQVSLPHFLQT
Trigger: GGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAGGCAAAGAGAAAGCAATTGCAAAGGCCCTGCTGTCAAACCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp CCCATCCCTTCTCTGATCTCCACTGTAACATTGCCTCTAGCTCCCTaGAAATGTTTCCACAAGCGTCAGGGCTACTCTGAAGTATTAATG +
Preference number: 2 (lower is better)
Translates to: PIPSLISTVTLPLAP*KCFHKRQGYSEVLM
Trigger: CATTAATACTTCAGAGTAGCCCTGACGCTTGTGGAAACATTTCAAGGGAGCTAGAGGCAATGTTACAGTGGAGATCAGAGAAGGGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACCCAAGGCCAGATTATaGACACCTGGCTCGAGGCCA +
Preference number: 2 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLPKARL*TPGSRP
Trigger: TGGCCTCGAGCCAGGTGTTCATAATCTGGCCTTGGG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTTCTCTGACACCCAAGTaGAGAAAGCAAAAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: FATQPHSGCISCFHHHPLSLTPK*RKQKLC
Trigger: GCAGAGCTTTTGCTTTCTTCACTTGGGTGTCAGAGA...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCACAGGGCCACTGTGTaGCTGAATCAATGTGGTTGG +
Preference number: 2 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGHRATV*LNQCGW
Trigger: CCAACCACATTGATTCAGTCACACAGTGGCCCTGTG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTCACCCTCCGTGACATaGGCATCACGCGACCCACAG +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLESPSVT*ASRDPQ
Trigger: CTGTGGGTCGCGTGATGCGCATGTCACGGAGGGTGA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTATGTACCTTGTTCTTaGAGGATTGCTCACCGCCTT +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSYVPCS*RIAHRL
Trigger: AAGGCGGTGAGCAATCCTGCAAGAACAAGGTACATA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGCTCCTGAGGGTATCTaGGGAATCTCACAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVAPEGI*GISQFW
Trigger: CCAAAACTGTGAGATTCCGCAGATACCCTCAGGAGC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATTCTACACACCAGAGTaGCAAGGCTCTGAGGAATTC +
Preference number: 2 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKFYTPE*QGSEEF
Trigger: GAATTCCTCAGAGCCTTGGCACTCTGGTGTGTAGAA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTCACAGTGGCAGAAGATaGCTCCCAAAGGGGAATAAT +
Preference number: 2 (lower is better)
Translates to: FATQPHSGCISCFHHHPLHSGRR*LPKGNN
Trigger: ATTATTCCCCTTTGGGAGGCATCTTCTGCCACTGTG...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCGGTAGAAATAGCTACTaGCCCTCTCTCTTAGCTTAC +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSGRNSY*PSLLAY
Trigger: GTAAGCTAAGAGAGAGGGGCAGTAGCTATTTCTACC...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAGAGGAGAGATGGTGCTaGTCACCAGGGTTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVEERWC*SPGLPP
Trigger: TGGGGGCAACCCTGGTGACCAGCACCATCTCTCCTC...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGCACCTGACTACACATaGGTGCAAGTGTGCATGAAC +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLAPDYT*VQVCMN
Trigger: GTTCATGCACACTTGCACCCATGTGTAGTCAGGTGC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTTCTTCCCCAAACCTTaGCCAGTCGAGAGTCTAAAT +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSFFPKP*PVESLN
Trigger: ATTTAGACTCTCGACTGGCCAAGGTTTGGGGAAGAA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTTCCGGAGCAAGCTCTaGGCTCTAAAATTGAGCTTA +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSFRSKL*ALKLSL
Trigger: TAAGCTCAATTTTAGAGCCCAGAGCTTGCTCCGGAA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCGAGTTTAAGTTCATGTaGATCTTGCTGTTCCGGAGC +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSEFKFM*ILLFRS
Trigger: GCTCCGGAACAGCAAGATCCACATGAACTTAAACTC...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGCACCTAGAACAGCCTaGCATGGGTTTCCACTCAAT +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLAPRTA*HGFPLN
Trigger: ATTGAGTGGAAACCCATGCCAGGCTGTTCTAGGTGC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTCTGCCTAAGAATCAGTaGTTCATCACCAGCCACAAC +
Preference number: 2 (lower is better)
Translates to: FATQPHSGCISCFHHHPLLPKNQ*FITSHN
Trigger: GTTGTGGCTGGTGATGAACCACTGATTCTTAGGCAG...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp ACCTCACACATAAGGTTGCATTCAGGTTCCTCACTCATCTCCGCTTaGGTCCTTGCTCTTTCAAGTTTCCCTACTTTCCGAAGCTATCAT +
Preference number: 2 (lower is better)
Translates to: TSHIRLHSGSSLISA*VLALSSFPTFRSYH
Trigger: ATGATAGCTTCGGAAAGTAGGGAAACTTGAAAGAGCAAGGACCAAAGCGGAGATGAGTGAGGAACCTGAATGCAACCTTATGTGTGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp CTGTGTCAGAAACAACGTGCAGTGTCTCTGGGGGCAGACTCTAGGTaGCTCTTGCTAAATCTCCAAATGCCTACACAGTGGAATTTTATT +
Preference number: 2 (lower is better)
Translates to: LCQKQRAVSLGADSR*LLLNLQMPTQWNFI
Trigger: AATAAAATTCCACTGTGTAGGCATTTGGAGATTTAGCAAGAGCAACCTAGAGTCTGCCCCCAGAGACACTGCACGTTGTTTCTGACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCCTGGCCAAAGTGCATaGACATTTCTCACAAACCAG +
Preference number: 2 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVPGQSA*TFLTNQ
Trigger: CTGGTTTGTGAGAAATGTTCATGCACTTTGGCCAGG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCGTTTTTGGCACTACTaGCACCAGCAACATTTAATG +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSRFWHY*HQQHLM
Trigger: CATTAAATGTTGCTGGTGTCAGTAGTGCCAAAAACG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCAGGGTGTCAAGCAATaGCAGGGCCTTTTTAGAGAG +
Preference number: 2 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGQGVKQ*QGLFRE
Trigger: CTCTCTAAAAAGGCCCTGTCATTGCTTGACACCCTG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTAGGTTAAGTAGCACCTaGGGTCATAAGTGGCTCTTT +
Preference number: 2 (lower is better)
Translates to: FATQPHSGCISCFHHHPLRLSST*GHKWLF
Trigger: AAAGAGCCACTTATGACCTCAGGTGCTACTTAACCT...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGTCTACAAGGCTGTGTaGTTAGTGAGCCAGAACTGT +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLVYKAV*LVSQNC
Trigger: ACAGTTCTGGCTCACTAATCACACAGCCTTGTAGAC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAAGGAGGAGAGATGGTaGTGGTCACCAGGGTTGCCC +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEKEERW*WSPGLP
Trigger: GGGCAACCCTGGTGACCAGCACCATCTCTCCTCCTT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATAGAAAGAGTCAAGGTTaGCTTCTCTTGAGGCACCTG +
Preference number: 2 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYRKSQG*LLLRHL
Trigger: CAGGTGCCTCAAGAGAAGGCAACCTTGACTCTTTCT...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGTGTTCCCTACTCTATTaGTCTCAGTGCTCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVCSLLY*SQCSLL
Trigger: GAGCAGAGAGCACTGAGAGCAATAGAGTAGGGAACA...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTCAAACCACCAATAACTaGAAGCCCTCCATAACCTCA +
Preference number: 2 (lower is better)
Translates to: FATQPHSGCISCFHHHPLQTTNN*KPSITS
Trigger: TGAGGTTATGGAGGGCTTGCAGTTATTGGTGGTTTG...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGCCCTATGTAAAACCCTaGCCAAAGTGCATGAACATT +
Preference number: 2 (lower is better)
Translates to: FTEKAGREKERKHYRLPEPYVKP*PKCMNI
Trigger: AATGTTCATGCACTTTGGCCAGGGTTTTACATAGGG...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGAGAGCACATAAGGTATaGCCACAGTCCCTGGAAATG +
Preference number: 2 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVRAHKV*PQSLEM
Trigger: CATTTCCAGGGACTGTGGCCATACCTTATGTGCTCT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCAGATCAGTCCCAGCATaGATCAGGTTATTAGAGACT +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSRSVPA*IRLLET
Trigger: AGTCTCTAATAACCTGATCCATGCTGGGACTGATCT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAACACTCATCTCCGCTTTaGTCCTTGCTCTTTCAAGTT +
Preference number: 2 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKHSSPL*SLLFQV
Trigger: AACTTGAAAGAGCAAGGACCAAAGCGGAGATGAGTG...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCATGTTTGACTGGCAATaGCCAGGTAGATTTCACCAT +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSMFDWQ*PGRFHH
Trigger: ATGGTGAAATCTACCTGGCCATTGCCAGTCAAACAT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp AGATCAGTTTGGGAAAAGCTACCTTTGTGCTCACATAGCCTCTTTTaGGTTCTCCCAGCTTCACTCAAAGAGGATATCAAGGAGCTCTTC +
Preference number: 2 (lower is better)
Translates to: RSVWEKLPLCSHSLF*VLPASLKEDIKELF
Trigger: GAAGAGCTCCTTGATATCCTCTTTGAGTGAAGCTGGGAGAACCAAAAAGAGGCTATGTGAGCACAAAGGTAGCTTTTCCCAAACTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp TACTTTCCAGTTTGTTCAAGAATCCACTCTGCCACCAATGACCTTTaGTTCTGTTCACCACCACTATCGAGTCTCATGGGGTTGAAGCAA +
Preference number: 2 (lower is better)
Translates to: YFPVCSRIHSATNDL*FCSPPLSSLMGLKQ
Trigger: TTGCTTCAACCCCATGAGACTCGATAGTGGTGGTGAACAGAACAAAAGGTCATTGGTGGCAGAGTGGATTCTTGAACAAACTGGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp GCCAAAATATGGTTTAAATGTCTTTGCCATCTAGAACCTGTATCCTaGTTCCCTACTCTATTGCTCTCAGTGCTCTCTGCTCCCTTCCTC +
Preference number: 2 (lower is better)
Translates to: AKIWFKCLCHLEPVS*FPTLLLSVLSAPFL
Trigger: GAGGAAGGGAGCAGAGAGCACTGAGAGCAATAGAGTAGGGAACAAGGATACAGGTTCTAGATGGCAAAGACATTTAAACCATATTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAACAATTGCCAACCACTaGGGACTTGTTTATGTACCT +
Preference number: 2 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKTIANH*GLVYVP
Trigger: AGGTACATAAACAAGTCCTCAGTGGTTGGCAATTGT...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTTGCTTAGAGCCAAATTaGACCCTATGTAAAACCCTG +
Preference number: 2 (lower is better)
Translates to: FATQPHSGCISCFHHHPLCLEPN*TLCKTL
Trigger: CAGGGTTTTACATAGGGTTCAATTTGGCTCTAAGCA...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGAATATTAGGTGCTCCTaGGGGTATCTGCGGAATCTC +
Preference number: 2 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGNIRCS*GYLRNL
Trigger: GAGATTCCGCAGATACCCTCAGGAGCACCTAATATT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTAAAGGAGGAAGTTGGTaGTTATGTTGGTTTGCAGCA +
Preference number: 2 (lower is better)
Translates to: FATQPHSGCISCFHHHPLKGGSW*LCWFAA
Trigger: TGCTGCAAACCAACATAATCACCAACTTCCTCCTTT...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTAAAAATACATGGCCCTaGACACAGGGAGCTTATGCT +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLKNTWP*TQGAYA
Trigger: AGCATAAGCTCCCTGTGTTCAGGGCCATGTATTTTT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCCAGAGCAGCTGAAGTaGAAGGACAGTACGAGCTCC +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEPEQLK*KDSTSS
Trigger: GGAGCTCGTACTGTCCTTTCACTTCAGCTGCTCTGG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCTTTGTAGAATCTTTTaGTCCCAAGTGTGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSLCRIF*SQVWAK
Trigger: TTTTGCCCACACTTGGGAGCAAAAGATTCTACAAAG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCTTTCTCTTAACTGTCTaGTCTGTAGCAGTTGTAATC +
Preference number: 2 (lower is better)
Translates to: TVELTHRINSPTASFRTGFLLTV*SVAVVI
Trigger: GATTACAACTGCTACAGAGCAGACAGTTAAGAGAAA...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATGCTGCACTCATGGAGTaGAGCTCATTTCTCTTAAAG +
Preference number: 2 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYAALME*SSFLLK
Trigger: CTTTAAGAGAAATGAGCTGCACTCCATGAGTGCAGC...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCAAACCCTGGCCAAAGTaGATGAACATTTCTCACAAA +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSKPWPK*MNISHK
Trigger: TTTGTGAGAAATGTTCATGCACTTTGGCCAGGGTTT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCGTAACAAGAAATTATTaGTGGCAGACTACGGCAAGT +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSVTRNY*WQTTAS
Trigger: ACTTGCCGTAGTCTGCCAGCAATAATTTCTTGTTAC...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTATCCTCCTTGCTTCCTaGCTATGTGAAACCTTGATA +
Preference number: 2 (lower is better)
Translates to: FATQPHSGCISCFHHHPLILLAS*LCETLI
Trigger: TATCAAGGTTTCACATAGGCAGGAAGCAAGGAGGAT...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCAAACTCCTAAAGCGTTaGCTATTCCTGTTGTCTCTA +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSKLLKR*LFLLSL
Trigger: TAGAGACAACAGGAATAGGCAACGCTTTAGGAGTTT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAGAAAAGGAGGAGAGATaGTGCTGGTCACCAGGGTTG +
Preference number: 2 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLEKEER*CWSPGL
Trigger: CAACCCTGGTGACCAGCACCATCTCTCCTCCTTTTC...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGAAGGGATCAAAGCATTaGAAACATCCCCCTCTCTCA +
Preference number: 2 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVKGSKH*KHPPLS
Trigger: TGAGAGAGGGGGATGTTTCCAATGCTTTGATCCCTT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCAACCACTTCTGCAATaGAAGGGAATGATAGAGGGT +
Preference number: 2 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVQPLLQ*KGMIEG
Trigger: ACCCTCTATCATTCCCTTCCATTGCAGAAGTGGTTG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTATGTTTCCCAAGTTCTaGCTGAGGATACACAGTGAC +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLMFPKF*LRIHSD
Trigger: GTCACTGTGTATCCTCAGCCAGAACTTGGGAAACAT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGATCACAACATGGCTGTaGCCAGTGCAGGGAAATACA +
Preference number: 2 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGITTWL*PVQGNT
Trigger: TGTATTTCCCTGCACTGGCCACAGCCATGTTGTGAT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTTTAGCTAAGCATGGTTaGTGTAGTGAGATGGCAAGA +
Preference number: 2 (lower is better)
Translates to: FATQPHSGCISCFHHHPLLAKHG*CSEMAR
Trigger: TCTTGCCATCTCACTACACCAACCATGCTTAGCTAA...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTACACATGCTCAGAGGTaGCTTAATATTCCAGAGCAC +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLTHAQR*LNIPEH
Trigger: GTGCTCTGGAATATTAAGCCACCTCTGAGCATGTGT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGTTCTCAGTGCCCCTTaGCTTCCCAATTTAAGTCAA +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLVLSAP*LPNLSQ
Trigger: TTGACTTAAATTGGGAAGCCAAGGGGCACTGAGAAC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGCTTCCTCACCTAAATaGAAAGATCAGTTTGGGAAA +
Preference number: 2 (lower is better)
Translates to: FATQPHSGCISCFHHHPLASSPK*KDQFGK
Trigger: TTTCCCAAACTGATCTTTTCATTTAGGTGAGGAAGC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGTTGGTTCAAACTGGTTaGAACAATTGCCAACCACTG +
Preference number: 2 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVLVQTG*NNCQPL
Trigger: CAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAA...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGAAAGAATCATGGCTGTaGAAATTCGGTTTCCCTTTA +
Preference number: 2 (lower is better)
Translates to: FTEKAGREKERKHYRLPEKESWL*KFGFPL
Trigger: TAAAGGGAAACCGAATTTTCACAGCCATGATTCTTT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGCAGGGAAATACATATaGAGGATGTTTCCCAAGTTC +
Preference number: 2 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVAGKYI*RMFPKF
Trigger: GAACTTGGGAAACATCCTTCATATGTATTTCCCTGC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTACAACAGAGGGGTCTTaGAGGAAGGAAGATATAGAA +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLTTEGS*RKEDIE
Trigger: TTCTATATCTTCCTTCCTTCAAGACCCCTCTGTTGT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCTGCTCACTGTGGGCTaGCCAAAACTACTGACACCT +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLELLTVG*PKLLTP
Trigger: AGGTGTCAGTAGTTTTGGTCAGCCCACAGTGAGCAG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTTAAGCATAATGCTGTaGGCCAAAATTTCTTCTGCA +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSLSIML*AKISSA
Trigger: TGCAGAAGAAATTTTGGCTCACAGCATTATGCTTAA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGGCAACATGGCGATCCTaGAGTCAAGCTTCCACACAG +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEATWRS*SQASTQ
Trigger: CTGTGTGGAAGCTTGACTGCAGGATCGCCATGTTGC...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGTATCATGTCATACATaGGTTTTTGGCACTACTGAC +
Preference number: 2 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKVSCHT*VFGTTD
Trigger: GTCAGTAGTGCCAAAAACGCATGTATGACATGATAC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTACTTATTCCCAGTACTaGTATTCTAACCCATTACTC +
Preference number: 2 (lower is better)
Translates to: LGSSLETLSTMHVFELCATYSQY*YSNPLL
Trigger: GAGTAATGGGTTAGAATAGCAGTACTGGGAATAAGT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGAAAACCAGAATGTATTaGCTCCCAATGGTAATTGTC +
Preference number: 2 (lower is better)
Translates to: FTEKAGREKERKHYRLPEKTRMY*LPMVIV
Trigger: GACAATTACCATTGGGAGGCAATACATTCTGGTTTT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCTGAATCAATGTGGTTaGAATGAGTTGAGGGTGGGA +
Preference number: 2 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGLNQCG*NELRVG
Trigger: TCCCACCCTCAACTCATTCCAACCACATTGATTCAG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATGTTCAGAAGGTGACTaGAAGTATGTGTATGAAGGA +
Preference number: 2 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKCSEGD*KYVYEG
Trigger: TCCTTCATACACATACTTCCAGTCACCTTCTGAACA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTAGGGTTCTTATGTCATaGTCAAAGGGAGCATTAAAA +
Preference number: 2 (lower is better)
Translates to: LGSSLETLSTMHVFELCARVLMS*SKGALK
Trigger: TTTTAATGCTCCCTTTGACCATGACATAAGAACCCT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCATTAGAATGTTTGACTaGCAATGGCCAGGTAGATTT +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSIRMFD*QWPGRF
Trigger: AAATCTACCTGGCCATTGCCAGTCAAACATTCTAAT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp GAGCTTCCTGAAACCTTTCAGTCACGCCAAGAATGGGAAGTTAATTaGACCTTAATTCTGTTTAAGCCCTTTTGGGAATCTTTCCTACCC +
Preference number: 2 (lower is better)
Translates to: ELPETFQSRQEWEVN*TLILFKPFWESFLP
Trigger: GGGTAGGAAAGATTCCCAAAAGGGCTTAAACAGAATTAAGGTCAAATTAACTTCCCATTCTTGGCGTGACTGAAAGGTTTCAGGAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGTTTTCCAATGTTAAGTaGAGGGAGCATCAGTTCTGC +
Preference number: 2 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGFSNVK*REHQFC
Trigger: GCAGAACTGATGCTCCCTTCACTTAACATTGGAAAA...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTATCCTACCCTAGGTACTaGCAGAGGAAATATGGTGCC +
Preference number: 2 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVSYPRY*QRKYGA
Trigger: GGCACCATATTTCCTCTGTCAGTACCTAGGGTAGGA...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGAGTCCCTGGAAATGCTaGATGCATTCATCAATATCA +
Preference number: 2 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVSPWKC*MHSSIS
Trigger: TGATATTGATGAATGCATTCAGCATTTCCAGGGACT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGGAATTCAATGAGGCCTaGTGGATTTATGGACCAGAA +
Preference number: 2 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGEFNEA*WIYGPE
Trigger: TTCTGGTCCATAAATCCATCAGGCCTCATTGAATTC...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGAAAGAGGGAATTCAATaGGGCCTGATGGATTTATGG +
Preference number: 2 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGKEGIQ*GLMDLW
Trigger: CCATAAATCCATCAGGCCTCATTGAATTCCCTCTTT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGCCAAACAATCACACTaGTTGGGGATATTGAAAGAA +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLAKQSH*LGILKE
Trigger: TTCTTTCAATATCCCCAAGCAGTGTGATTGTTTGGC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCACAGTAGGAAAGATTaGCTGTTGAAAGACAGGACA +
Preference number: 2 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGHSRKD*LLKDRT
Trigger: TGTCCTGTCTTTCAACAGGCAATCTTTCCTACTGTG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGTGATTATGTTGGTTTaGAGCAATGGTTTTGGATAT +
Preference number: 2 (lower is better)
Translates to: LGSSLETLSTMHVFELCAVIMLV*SNGFGY
Trigger: ATATCCAAAACCATTGCTGCAAACCAACATAATCAC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTATCCTTAGGTGCTACTaGAGATACAAATGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLILRCY*RYKWAK
Trigger: TTTTGCCCATTTGTATCTGCAGTAGCACCTAAGGAT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGATATATAAACACAAATaGCCTCCCAACCTCTGCTTG +
Preference number: 2 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVIYKHK*PPNLCL
Trigger: CAAGCAGAGGTTGGGAGGCCATTTGTGTTTATATAT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGTTCTTGGTTCAAACTaGTTGAAACAATTGCCAACC +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLVLGSN*LKQLPT
Trigger: GGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTTGGTACCCTCATCCCTaGAGTTTTATACATGTATAT +
Preference number: 2 (lower is better)
Translates to: FATQPHSGCISCFHHHPLWYPHP*SFIHVY
Trigger: ATATACATGTATAAAACTCCAGGGATGAGGGTACCA...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACTGACAGAGGAAATATaGTGCCACCAGCCTGTCTTT +
Preference number: 2 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLLTEEI*CHQPVF
Trigger: AAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCAGTCACGCCAAGAATaGGAAGTTAATTTGACCTTA +
Preference number: 2 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVQSRQE*EVNLTL
Trigger: TAAGGTCAAATTAACTTCCCATTCTTGGCGTGACTG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGAAGTTCTATTTGTCTaGTTAACCCAAGGCCAGATT +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLEVLFV*LTQGQI
Trigger: AATCTGGCCTTGGGTTAACCAGACAAATAGAACTTC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGTTTCCTATATGGCTTTaGGCTCAGAGAGCACATAAG +
Preference number: 2 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGFPIWL*AQRAHK
Trigger: CTTATGTGCTCTCTGAGCCCAAAGCCATATAGGAAA...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGTTATTCAGCTTGTCTaGATTATGGGACACACACAT +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLVIQLV*IMGHTH
Trigger: ATGTGTGTGTCCCATAATCCAGACAAGCTGAATAAC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTACAACGAAAGTGTTATaGGCATTCATAAAATGCCTA +
Preference number: 2 (lower is better)
Translates to: LGSSLETLSTMHVFELCATTKVL*AFIKCL
Trigger: TAGGCATTTTATGAATGCCCATAACACTTTCGTTGT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGACATGAACAGTTCATaGCTAAAATGCCTAGAATTT +
Preference number: 2 (lower is better)
Translates to: LGSSLETLSTMHVFELCADMNSS*LKCLEF
Trigger: AAATTCTAGGCATTTTAGCCATGAACTGTTCATGTC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTATAAAAACATGTTGTaGCCTATCACAGTTAGCAGT +
Preference number: 2 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSYKNML*PITVSS
Trigger: ACTGCTAACTGTGATAGGCCACAACATGTTTTTATA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp ATTTTCACTAGGTATCTCCCAAGTTGTCACAAGTTTTGCCCTACCTaGCCAATAATAATTGTCCTACCCACTCCTGTCTCAATGAAGAGT +
Preference number: 2 (lower is better)
Translates to: IFTRYLPSCHKFCPT*PIIIVLPTPVSMKS
Trigger: ACTCTTCATTGAGACAGGAGTGGGTAGGACAATTATTATTGGCAAGGTAGGGCAAAACTTGTGACAACTTGGGAGATACCTAGTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp CATGAACAGTTCATGGCTAAAATGCCTAGAATTTTGGTCCATTTATaGGCCCAAATGAGATTCATGAACGTCCTTCATGAGGATGGCTGT +
Preference number: 2 (lower is better)
Translates to: HEQFMAKMPRILVHL*AQMRFMNVLHEDGC
Trigger: ACAGCCATCCTCATGAAGGACGTTCATGAATCTCATTTGGGCCAATAAATGGACCAAAATTCTAGGCATTTTAGCCATGAACTGTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp TGTGTGAGCTGCCAAGGTGCCAATGATCAAATAGAGAAGTCTAGCTaGGAAATAAATCAAAACCATCAGAGGAATTACATTCCACCCCTA +
Preference number: 2 (lower is better)
Translates to: CVSCQGANDQIEKSS*EINQNHQRNYIPPL
Trigger: TAGGGGTGGAATGTAATTCCTCTGATGGTTTTGATTTATTTCCAAGCTAGACTTCTCTATTTGATCATTGGCACCTTGGCAGCTCACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp AACATTATAGTTAACACACTGCAGTTGCCCTTGACTCCACATCTCTaGCTTTCATTATATTCACCTGGTTATACCCCAACCCTGTTCCAA +
Preference number: 2 (lower is better)
Translates to: NIIVNTLQLPLTPHL*LSLYSPGYTPTLFQ
Trigger: TTGGAACAGGGTTGGGGTATAACCAGGTGAATATAATGAAAGCAAGAGATGTGGAGTCAAGGGCAACTGCAGTGTGTTAACTATAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGGCAAGTGAAGCCCACTaGAGGTTGTTTCTTGATCTG +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEASEAH*RLFLDL
Trigger: CAGATCAAGAAACAACCTTCAGTGGGCTTCACTTGC...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGAGTCGAGAGTCTAAATaGTCAAAAGAGCTTTGTAGA +
Preference number: 2 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVSRESK*SKELCR
Trigger: TCTACAAAGCTCTTTTGAGCATTTAGACTCTCGACT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTTTATGTGTCCTGTGTaGAACATGGCGATCCTGCAG +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEFMCPV*NMAILQ
Trigger: CTGCAGGATCGCCATGTTGCACACAGGACACATAAA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACATCTTGATTTCTGTTaGCAGCGGAGACTGAAAGAG +
Preference number: 2 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLHLDFC*QRRLKE
Trigger: CTCTTTCAGTCTCCGCTGGCAACAGAAATCAAGATG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTACATGGCTGTGGCCAGTaGAGGGAAATACATATGAAG +
Preference number: 2 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVHGCGQ*REIHMK
Trigger: CTTCATATGTATTTCCCTGCACTGGCCACAGCCATG...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTAGTTCATGGCTAAAATaGCTAGAATTTTGGTCCATT +
Preference number: 2 (lower is better)
Translates to: FATQPHSGCISCFHHHPLSSWLK*LEFWSI
Trigger: AATGGACCAAAATTCTAGGCATTTTAGCCATGAACT...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAAGTTGTAATCAGTTTTaGGGGGAAGAAGCCTGCTCG +
Preference number: 2 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVSCNQF*GEEACS
Trigger: CGAGCAGGCTTCTTCCCCCCAAAACTGATTACAACT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGGGAATCTCACAGTTTTaGATGGATTGGGTGTTGTTT +
Preference number: 2 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGGISQF*MDWVLF
Trigger: AAACAACACCCAATCCATCCAAAACTGTGAGATTCC...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAGGGAGTGGTCATCTTaGGGGAATAAGATGCTCCAA +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEREWSS*GNKMLQ
Trigger: TTGGAGCATCTTATTCCCCCAAGATGACCACTCCCT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTTCCTCCCCCAAAACCTaGATATTTATTCTAAGTGTT +
Preference number: 2 (lower is better)
Translates to: LCIESPKSHSLISSKPLLSSPKT*IFILSV
Trigger: AACACTTAGAATAAATATCCAGGTTTTGGGGGAGGA...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp CATAAGGTGAGGAAGTGGAGAAAGAAAGACTACCCTTTTGAGAAGTaGGGAAGTGAAAAGATAGCGATAGGACAGAAATTCAAGAGTCAA +
Preference number: 2 (lower is better)
Translates to: HKVRKWRKKDYPFEK*GSEKIAIGQKFKSQ
Trigger: TTGACTCTTGAATTTCTGTCCTATCGCTATCTTTTCACTTCCCAACTTCTCAAAAGGGTAGTCTTTCTTTCTCCACTTCCTCACCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp CCCAAATCCCCTTCAGCTATAGTGAAATACACAGACGCTGAATATTaGGGAGGATTACTTAACGTTTTAGCTTTCCTGGTTTGCTTAGAA +
Preference number: 2 (lower is better)
Translates to: PKSPSAIVKYTDAEY*GGLLNVLAFLVCLE
Trigger: TTCTAAGCAAACCAGGAAAGCTAAAACGTTAAGTAATCCTCCCAAATATTCAGCGTCTGTGTATTTCACTATAGCTGAAGGGGATTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCTTCAGATTTCTATGTaGCCCATTTCTCGTGCCTGT +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLELQISM*PISRAC
Trigger: ACAGGCACGAGAAATGGGTCACATAGAAATCTGAAG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAGAAGAGGAAAGGGGTaGTCATGTGTCTCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLERRGKG*SCVSKK
Trigger: CTTCTTTGAGACACATGATCACCCCTTTCCTCTTCT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCTGTTCAGGGTTCCGTaGGGGTTTGGAAAAATAGTT +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLELFRVP*GFGKIV
Trigger: AACTATTTTTCCAAACCCTCACGGAACCCTGAACAG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAATAAAGAGCCGCTATTaGCACCATTGCTCACATACC +
Preference number: 2 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVIKSRY*HHCSHT
Trigger: GGTATGTGAGCAATGGTGCCAATAGCGGCTCTTTAT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAAGCAACAAATCTGTGTaGGAAGGTGGTAGTTGCAGT +
Preference number: 2 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVSNKSV*EGGSCS
Trigger: ACTGCAACTACCACCTTCCCACACAGATTTGTTGCT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGGTCCCTCTTATCACTTaGACTTTCATCCCCAGATAC +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEVPLIT*TFIPRY
Trigger: GTATCTGGGGATGAAAGTCCAAGTGATAAGAGGGAC...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp AGGAAGTTGGTGATTATGTTGGTTTGCAGCAATGGTTTTGGATATTaGAGTCAAGATGAAGTTGAGTGTTCAGAAGGTGACTGGAAGTAT +
Preference number: 2 (lower is better)
Translates to: RKLVIMLVCSNGFGY*SQDEVECSEGDWKY
Trigger: ATACTTCCAGTCACCTTCTGAACACTCAACTTCATCTTGACTCAAATATCCAAAACCATTGCTGCAAACCAACATAATCACCAACTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAAAGACTCAGATGACTaGGACGATTGTTTCAGCATC +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEKDSDD*DDCFSI
Trigger: GATGCTGAAACAATCGTCTCAGTCATCTGAGTCTTT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCCTCTGTCACTTACTTaGACACATGTAGTGTTCCAA +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEPLSLT*THVVFQ
Trigger: TTGGAACACTACATGTGTTCAAGTAAGTGACAGAGG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCGTAGGTTTAAGACTTaGTCTTCTTGGGGATGCAAT +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLERRFKT*SSWGCN
Trigger: ATTGCATCCCCAAGAAGAGCAAGTCTTAAACCTACG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGGGATTCATCCTTAGGTaGTACTGCAGATACAAATGG +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEGFILR*YCRYKW
Trigger: CCATTTGTATCTGCAGTAGCACCTAAGGATGAATCC...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGAATTCAGGTAATACATaGCCATCTCTGTCTGTATAT +
Preference number: 2 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGNSGNT*PSLSVY
Trigger: ATATACAGACAGAGATGGCCATGTATTACCTGAATT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAGAGAGAAATACAATTaGCTGGAGAGCACCTCAGAA +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEREKYN*LESTSE
Trigger: TTCTGAGGTGCTCTCCAGCCAATTGTATTTCTCTCT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGACCTATGAAATAAGATaGCCCATGATAGCTGCCACT +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLETYEIR*PMIAAT
Trigger: AGTGGCAGCTATCATGGGCCATCTTATTTCATAGGT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGAAATGCCTAGAATTTTaGTCCATTTATTGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGKCLEF*SIYWPK
Trigger: TTTGGGCCAATAAATGGACCAAAATTCTAGGCATTT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp GACATGGTGATACCATTAAGCAAAAGGAGGAAGTTGGTGATTATGTaGGTTTGCAGCAATGGTTTTGGATATTTGAGTCAAGATGAAGTT +
Preference number: 2 (lower is better)
Translates to: DMVIPLSKRRKLVIM*VCSNGFGYLSQDEV
Trigger: AACTTCATCTTGACTCAAATATCCAAAACCATTGCTGCAAACCAACATAATCACCAACTTCCTCCTTTTGCTTAATGGTATCACCATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAAAGAAAAGACTCAGATaGCTGAGACGATTGTTTCAG +
Preference number: 2 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVKKRLR*LRRLFQ
Trigger: CTGAAACAATCGTCTCAGTCATCTGAGTCTTTTCTT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGACCCTTGGGATTAAATaGAATCTGCTGATTCTACTC +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLETLGIK*NLLILL
Trigger: GAGTAGAATCAGCAGATTTCATTTAATCCCAAGGGT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAAAGTAAGGTATGACTaGGTTGGCTGTGATACCTTA +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEKVRYD*VGCDTL
Trigger: TAAGGTATCACAGCCAACTCAGTCATACCTTACTTT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAATGAAAAGATCAGTTTaGGAAAAGCTACCTTTGTGC +
Preference number: 2 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLMKRSV*EKLPLC
Trigger: GCACAAAGGTAGCTTTTCCCAAACTGATCTTTTCAT...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTACAGTTTTGGATGGATTaGGTGTTGTTTCATACCCAT +
Preference number: 2 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVQFWMD*VLFHTH
Trigger: ATGGGTATGAAACAACACCCAATCCATCCAAAACTG...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 90 bp AGTGAAAAGATAGCGATAGGACAGAAATTCAAGAGTCAAATTGGATaGAGAGATTTGTCTTTAGAGATAGTTGTAGGACGGGTGTTTTTG +
Preference number: 2 (lower is better)
Translates to: SEKIAIGQKFKSQIG*RDLSLEIVVGRVFL
Trigger: CAAAAACACCCGTCCTACAACTATCTCTAAAGACAAATCTCTCAATCCAATTTGACTCTTGAATTTCTGTCCTATCGCTATCTTTTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR GCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGACAATGACAGTTAACTaGAAGACTGTTCTGAATAGG +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLETMTVN*KTVLNR
Trigger: CCTATTCAGAACAGTCTTGCAGTTAACTGTCATTGT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAAAACAATTCCCCCAATaGGAAATGAAAACCCATAAC +
Preference number: 2 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVKQFPQ*EMKTHN
Trigger: GTTATGGGTTTTCATTTCCCATTGGGGGAATTGTTT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTTCAATTTAAGGTTTTaGGTGAGGGCCTTTGTCATA +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEFNLRF*VRAFVI
Trigger: TATGACAAAGGCCCTCACCCAAAACCTTAAATTGAA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTATTGCAGGTAGATGTGTaGAAGGAATTAAAGATGCAA +
Preference number: 2 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVLQVDV*KELKMQ
Trigger: TTGCATCTTTAATTCCTTCCACACATCTACCTGCAA...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTTCCATAGGGTAAAATaGGAAAATGGAGACGATAAC +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEFHRVK*ENGDDN
Trigger: GTTATCGTCTCCATTTTCCCATTTTACCCTATGGAA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCAGACGCTGAATATTTaGGAGGATTACTTAACGTTT +
Preference number: 2 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEQTLNI*EDYLTF
Trigger: AAACGTTAAGTAATCCTCCCAAATATTCAGCGTCTG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAATATGTCACCTTTCCTaGGATTACTTTCATTCGAAT +
Preference number: 2 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVICHLS*DYFHSN
Trigger: ATTCGAATGAAAGTAATCCCAGGAAAGGTGACATAT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp CCCAGGGAGGAGTGTGGAGTCTGGGCCTCGCAGAGCTaGGGCAAGCCTGAGTCGTCGGTGCTCCCTGGAGAG +
Preference number: 3 (lower is better)
Translates to: PREECGVWASQS*GKPESSVLPGE
Trigger: CTCTCCAGGGAGCACCGACGACTCAGGCTTGCCTCAGCTCTGCGAGGCCCAGACTCCACACTCCTCCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp TGGGAACCAAGTTCACCCCCGTCACCCTCCGTGACATaGGCATCACGCGACCCACAGCCTTACCCTCCCGTA +
Preference number: 3 (lower is better)
Translates to: WEPSSPPSPSVT*ASRDPQPYPPV
Trigger: TACGGGAGGGTAAGGCTGTGGGTCGCGTGATGCGCATGTCACGGAGGGTGACGGGGGTGAACTTGGTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp GCAAATGGGAACCAAGTTCACCCCCGTCACCCTCCGTaGCATGCGCATCACGCGACCCACAGCCTTACCCTC +
Preference number: 3 (lower is better)
Translates to: ANGNQVHPRHPP*HAHHATHSLTL
Trigger: GAGGGTAAGGCTGTGGGTCGCGTGATGCGCATGTCACGGAGGGTGACGGGGGTGAACTTGGTTCCCATTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp GCACCTTCCTCATGCCCTGGGGCCTGGAGGTGGAGATaGCCTTCTTGCCCCTCATTGCCATTCCAGACCATC +
Preference number: 3 (lower is better)
Translates to: APSSCPGAWRWR*PSCPSLPFQTI
Trigger: GATGGTCTGGAATGGCAATGAGGGGCAAGAAGGGCATCTCCACCTCCAGGCCCCAGGGCATGAGGAAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp GTGGTGAGCATTTCCACTTGCACCTTCCTCATGCCCTaGGGCCTGGAGGTGGAGATGCCCTTCTTGCCCCTC +
Preference number: 3 (lower is better)
Translates to: VVSISTCTFLMP*GLEVEMPFLPL
Trigger: GAGGGGCAAGAAGGGCATCTCCACCTCCAGGCCCCAGGGCATGAGGAAGGTGCAAGTGGAAATGCTCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp TGGGACAGCCAAGGAGGCTCATCTTTCCGGAACAGTTaGCTGATGGGGACACAACCGGGTGCTCCCTCAGCC +
Preference number: 3 (lower is better)
Translates to: WDSQGGSSFRNS*LMGTQPGAPSA
Trigger: GGCTGAGGGAGCACCCGGTTGTGTCCCCATCAGCCAACTGTTCCGGAAAGATGAGCCTCCTTGGCTGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp ACCCCTGGACAGAGTCAGGGCGAAGCAGTGTTTACGTaGCCCTTCGCCTTCTTCCTCCTGGAGGTGCCTCAT +
Preference number: 3 (lower is better)
Translates to: TPGQSQGEAVFT*PFAFFLLEVPH
Trigger: ATGAGGCACCTCCAGGAGGAAGAAGGCGAAGGGCCACGTAAACACTGCTTCGCCCTGACTCTGTCCAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp GCATTTCCACTTGCACCTTCCTCATGCCCTGGGGCCTaGAGGTGGAGATGCCCTTCTTGCCCCTCATTGCCA +
Preference number: 3 (lower is better)
Translates to: AFPLAPSSCPGA*RWRCPSCPSLP
Trigger: TGGCAATGAGGGGCAAGAAGGGCATCTCCACCTCCAGGCCCCAGGGCATGAGGAAGGTGCAAGTGGAAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp ACAGCCAAGGAGGCTCATCTTTCCGGAACAGTTGGCTaGTGGGGACACAACCGGGTGCTCCCTCAGCCTTTC +
Preference number: 3 (lower is better)
Translates to: TAKEAHLSGTVG*WGHNRVLPQPF
Trigger: GAAAGGCTGAGGGAGCACCCGGTTGTGTCCCCATCAGCCAACTGTTCCGGAAAGATGAGCCTCCTTGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp GAGGTACCAGAGTTCCATGTGCTGCCATCAAGTCCCTaGCCCGGGCACTTGCAGCATCACCACCTCAATCTG +
Preference number: 3 (lower is better)
Translates to: EVPEFHVLPSSP*PGHLQHHHLNL
Trigger: CAGATTGAGGTGGTGATGCTGCAAGTGCCCGGGGCAGGGACTTGATGGCAGCACATGGAACTCTGGTACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp TCAGGACTGAGGAAGAGGTACCAGAGTTCCATGTGCTaGCATCAAGTCCCTGCCCCGGGCACTTGCAGCATC +
Preference number: 3 (lower is better)
Translates to: SGLRKRYQSSMC*HQVPAPGTCSI
Trigger: GATGCTGCAAGTGCCCGGGGCAGGGACTTGATGGCAGCACATGGAACTCTGGTACCTCTTCCTCAGTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp AGGCTGCCCTGCTCACTGTGGGCTGACCAAAACTACTaGCACCTTCGGAGTATCATGACACCCCTGCACACG +
Preference number: 3 (lower is better)
Translates to: RLPCSLWADQNY*HLRSIMTPLHT
Trigger: CGTGTGCAGGGGTGTCATGATACTCCGAAGGTGTCAGTAGTTTTGGTCAGCCCACAGTGAGCAGGGCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp AGGGTGATGATCAAGGGCTCCTTGGGTGCTGTAATCTaGAGGACCTGGGCAGGAATGACATGGGGCCAGGTT +
Preference number: 3 (lower is better)
Translates to: RVMIKGSLGAVI*RTWAGMTWGQV
Trigger: AACCTGGCCCCATGTCATTCCTGCCCAGGTCCTTCAGATTACAGCACCCAAGGAGCCCTTGATCATCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCCCTGCCCCGGGCACTaGCAGCATCACCACCTCAAT +
Preference number: 3 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSPCPGH*QHHHLN
Trigger: ATTGAGGTGGTGATGCTGCAAGTGCCCGGGGCAGGG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp CTCCCATTGCTGGTCCCTTCTCATCTCCTGGAGCTTTaGACAATCCTCCACCCTGGGCCTCAGTCTAGAGAA +
Preference number: 3 (lower is better)
Translates to: LPLLVPSHLLEL*TILHPGPQSRE
Trigger: TTCTCTAGACTGAGGCCCAGGGTGGAGGATTGTTCAAAGCTCCAGGAGATGAGAAGGGACCAGCAATGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp TCCTCCCTCATTGGCCTCCCGGCTCTTCCTCAAGTTTaGCAAGCATTTGGTTTGACAGCAGGGCCTTTGCAA +
Preference number: 3 (lower is better)
Translates to: SSLIGLPALPQV*QAFGLTAGPLQ
Trigger: TTGCAAAGGCCCTGCTGTCAAACCAAATGCTTGGCAAACTTGAGGAAGAGCCGGGAGGCCAATGAGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp AGCTTCCTAACCGGTCTTTCAGCCGCTTCCATTGTCTaGCCTCTCAGGGTATACTCTCAACACAGCAGTCCC +
Preference number: 3 (lower is better)
Translates to: SFLTGLSAASIV*PLRVYSQHSSP
Trigger: GGGACTGCTGTGTTGAGAGTATACCCTGAGAGGGCAGACAATGGAAGCGGCTGAAAGACCGGTTAGGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp GAAGGAGAGAACTGTGAAAAGGAGGAGAGATGGTGCTaGTCACCAGGGTTGCCCCCAGTAGGAACCAGAACT +
Preference number: 3 (lower is better)
Translates to: EGENCEKEERWC*SPGLPPVGTRT
Trigger: AGTTCTGGTTCCTACTGGGGGCAACCCTGGTGACCAGCACCATCTCTCCTCCTTTTCACAGTTCTCTCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp ACGAGAAGCCCAAGACCCCCAGTCCCTCTTATCACTTaGACTTTCATCCCCAGATACCCATGCACATCTCCC +
Preference number: 3 (lower is better)
Translates to: TRSPRPPVPLIT*TFIPRYPCTSP
Trigger: GGGAGATGTGCATGGGTATCTGGGGATGAAAGTCCAAGTGATAAGAGGGACTGGGGGTCTTGGGCTTCTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp GCATATCATGTTTCCATCATCACCCCCTTACACACGTaGGCTCACACACACGCTCACACACATGTGCACAGG +
Preference number: 3 (lower is better)
Translates to: AYHVSIITPLHT*AHTHAHTHVHR
Trigger: CCTGTGCACATGTGTGTGAGCGTGTGTGTGAGCGCACGTGTGTAAGGGGGTGATGATGGAAACATGATATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp GAGCACCTTTCTGGTTTATGTGTCCTGTGTGCAACATaGCGATCCTGCAGTCAAGCTTCCACACAGACCTGG +
Preference number: 3 (lower is better)
Translates to: EHLSGLCVLCAT*RSCSQASTQTW
Trigger: CCAGGTCTGTGTGGAAGCTTGACTGCAGGATCGCCATGTTGCACACAGGACACATAAACCAGAAAGGTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp GTGGAAGTAGCGTGTGGTGAAATACAGTGGTCCTGTTaGACCACCACCTGGGGTCTACAAGGCTGTGTGATT +
Preference number: 3 (lower is better)
Translates to: VEVACGEIQWSC*TTTWGLQGCVI
Trigger: AATCACACAGCCTTGTAGACCCCAGGTGGTGGTCCAACAGGACCACTGTATTTCACCACACGCTACTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCCGCTATTGGCACCATaGCTCACATACCCACCCTCC +
Preference number: 3 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSPLLAP*LTYPPS
Trigger: GGAGGGTGGGTATGTGAGCAATGGTGCCAATAGCGG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTAATACAGTGGTCCTGTaGGACCACCACCTGGGGTCT +
Preference number: 3 (lower is better)
Translates to: LGSSLETLSTMHVFELCANTVVL*DHHLGS
Trigger: AGACCCCAGGTGGTGGTCCAACAGGACCACTGTATT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp CCTGTTGGACCACCACCTGGGGTCTACAAGGCTGTGTaGTTAGTGAGCCAGAACTGTGACAAGGTTCTTTTG +
Preference number: 3 (lower is better)
Translates to: PVGPPPGVYKAV*LVSQNCDKVLL
Trigger: CAAAAGAACCTTGTCACAGTTCTGGCTCACTAATCACACAGCCTTGTAGACCCCAGGTGGTGGTCCAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp CCTCCCATTGAGAACAGACCTCTCCACCTCTGCTCATaGTGTTTCCAAGAAGAGATGTGGGCACATGTGCGA +
Preference number: 3 (lower is better)
Translates to: PPIENRPLHLCS*CFQEEMWAHVR
Trigger: TCGCACATGTGCCCACATCTCTTCTTGGAAACATCATGAGCAGAGGTGGAGAGGTCTGTTCTCAATGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp GCAGTAATGAGGACAAGGCAAATAAAGAGCCGCTATTaGCACCATTGCTCACATACCCACCCTCCCACGTCT +
Preference number: 3 (lower is better)
Translates to: AVMRTRQIKSRY*HHCSHTHPPTS
Trigger: AGACGTGGGAGGGTGGGTATGTGAGCAATGGTGCCAATAGCGGCTCTTTATTTGCCTTGTCCTCATTACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp TTTGTCTGGTTAACCCAAGGCCAGATTATGAACACCTaGCTCGAGGCCAGTAGCACCTTCCTGATGGCAGTA +
Preference number: 3 (lower is better)
Translates to: FVWLTQGQIMNT*LEASSTFLMAV
Trigger: TACTGCCATCAGGAAGGTGCTACTGGCCTCGAGCCAGGTGTTCATAATCTGGCCTTGGGTTAACCAGACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp TGTGGTGAAATACAGTGGTCCTGTTGGACCACCACCTaGGGTCTACAAGGCTGTGTGATTAGTGAGCCAGAA +
Preference number: 3 (lower is better)
Translates to: CGEIQWSCWTTT*GLQGCVISEPE
Trigger: TTCTGGCTCACTAATCACACAGCCTTGTAGACCCCAGGTGGTGGTCCAACAGGACCACTGTATTTCACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp ACCCCTAGGCTCAGTGGGAAAGAGTTTAAGTTCATGTaGATCTTGCTGTTCCGGAGCAAGCTCTGGGCTCTA +
Preference number: 3 (lower is better)
Translates to: TPRLSGKEFKFM*ILLFRSKLWAL
Trigger: TAGAGCCCAGAGCTTGCTCCGGAACAGCAAGATCCACATGAACTTAAACTCTTTCCCACTGAGCCTAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp TGGCCTCCCGGCTCTTCCTCAAGTTTGCCAAGCATTTaGTTTGACAGCAGGGCCTTTGCAATTGCTTTCTCT +
Preference number: 3 (lower is better)
Translates to: WPPGSSSSLPSI*FDSRAFAIAFS
Trigger: AGAGAAAGCAATTGCAAAGGCCCTGCTGTCAAACCAAATGCTTGGCAAACTTGAGGAAGAGCCGGGAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp CCTGGCAATTCCTTTCCTCTTGCTCTTACAGAAACCTaGCTCCTCTTTGAGGACCCTGAATCACTCCCAGGT +
Preference number: 3 (lower is better)
Translates to: PGNSFPLALTET*LLFEDPESLPG
Trigger: ACCTGGGAGTGATTCAGGGTCCTCAAAGAGGAGCCAGGTTTCTGTAAGAGCAAGAGGAAAGGAATTGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCGTTCTTCCCCAAACCTaGGCCAGTCGAGAGTCTAAA +
Preference number: 3 (lower is better)
Translates to: TVELTHRINSPTASFRTGVLPQT*ASRESK
Trigger: TTTAGACTCTCGACTGGCCAAGGTTTGGGGAAGAAC...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTCCTTCTTGCCCCTCATaGCCATTCCAGACCATCCTC +
Preference number: 3 (lower is better)
Translates to: FATQPHSGCISCFHHHPLPSCPS*PFQTIL
Trigger: GAGGATGGTCTGGAATGGCAATGAGGGGCAAGAAGG...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCAAACCTGGCTCCTCTTaGAGGACCCTGAATCACTCC +
Preference number: 3 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSKPGSS*RTLNHS
Trigger: GGAGTGATTCAGGGTCCTCAAAGAGGAGCCAGGTTT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp TCCCGGCTCTTCCTCAAGTTTGCCAAGCATTTGGTTTaGCAGCAGGGCCTTTGCAATTGCTTTCTCTTTGCC +
Preference number: 3 (lower is better)
Translates to: SRLFLKFAKHLV*QQGLCNCFLFA
Trigger: GGCAAAGAGAAAGCAATTGCAAAGGCCCTGCTGTCAAACCAAATGCTTGGCAAACTTGAGGAAGAGCCGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp CCAGTCAGCCTCACCTGCAGGATTCCTGTCTTACACTaGTGGCAACTCCAAACTTTCAATAGCTCAGGCCAA +
Preference number: 3 (lower is better)
Translates to: PVSLTCRIPVLH*WQLQTFNSSGQ
Trigger: TTGGCCTGAGCTATTGAAAGTTTGGAGTTGCCATCAGTGTAAGACAGGAATCCTGCAGGTGAGGCTGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp AGGACAAGGCAAATAAAGAGCCGCTATTGGCACCATTaGTCACATACCCACCCTCCCACGTCTAAACCTAAC +
Preference number: 3 (lower is better)
Translates to: RTRQIKSRYWHH*SHTHPPTSKPN
Trigger: GTTAGGTTTAGACGTGGGAGGGTGGGTATGTGAGCAATGGTGCCAATAGCGGCTCTTTATTTGCCTTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp TTCATTAATCTATGGCACTTTGTCCCTCCTCTCCCCTaGGGCCTAACTCCCAAATCCCCTTCAGCTATAGTG +
Preference number: 3 (lower is better)
Translates to: FINLWHFVPPLP*GLTPKSPSAIV
Trigger: CACTATAGCTGAAGGGGATTTGGGAGTTAGGCCGCAGGGGAGAGGAGGGACAAAGTGCCATAGATTAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp GAGGAAAAGAGATTTCCCCTAGGGACAAGAGCTCACTaGCCCATCCCTTCTCTGATCTCCACTGTAACATTG +
Preference number: 3 (lower is better)
Translates to: EEKRFPLGTRAH*PIPSLISTVTL
Trigger: CAATGTTACAGTGGAGATCAGAGAAGGGATGGGGCAGTGAGCTCTTGTCCCTAGGGGAAATCTCTTTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp TACCCTACCATACACGACTCCTTACTTCTTCAAAGGTaGCTTCGTTCTTCCCCAAACCTTGGCCAGTCGAGA +
Preference number: 3 (lower is better)
Translates to: YPTIHDSLLLQR*LRSSPNLGQSR
Trigger: TCTCGACTGGCCAAGGTTTGGGGAAGAACGAAGCCACCTTTGAAGAAGTAAGGAGTCGTGTATGGTAGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCTTATGTACCTTGTTCTaGCAGGATTGCTCACCGCCT +
Preference number: 3 (lower is better)
Translates to: TVELTHRINSPTASFRTGLCTLF*QDCSPP
Trigger: AGGCGGTGAGCAATCCTGCAAGAACAAGGTACATAA...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCAGGTCAGAAGTGATGTaGTCTCCCCCTGAGGTAATG +
Preference number: 3 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSRSEVM*SPPEVM
Trigger: CATTACCTCAGGGGGAGACAACATCACTTCTGACCT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTTTTCAGCCGCTTCCATaGTCTGCCCTCTCAGGGTAT +
Preference number: 3 (lower is better)
Translates to: FATQPHSGCISCFHHHPLFQPLP*SALSGY
Trigger: ATACCCTGAGAGGGCAGACAATGGAAGCGGCTGAAA...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp CACAACATGGCTGTGGCCAGTGCAGGGAAATACATATaGAGGATGTTTCCCAAGTTCTGGCTGAGGATACAC +
Preference number: 3 (lower is better)
Translates to: HNMAVASAGKYI*RMFPKFWLRIH
Trigger: GTGTATCCTCAGCCAGAACTTGGGAAACATCCTTCATATGTATTTCCCTGCACTGGCCACAGCCATGTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp GCTGAAGGGTTTGCCTTTATTAGTGGACAGAGAGGCTaGACCAGCAGCAGCAGTAGTTGTGATCTCATTCAC +
Preference number: 3 (lower is better)
Translates to: AEGFAFISGQRG*TSSSSSCDLIH
Trigger: GTGAATGAGATCACAACTACTGCTGCTGCTGGTTCAGCCTCTCTGTCCACTAATAAAGGCAAACCCTTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp GCTATCATTGAAGCCAGTAACCAAGGGGGAACCATGTaGCTCACATGTCAGCTTCTGGCTTTATTGGTGACA +
Preference number: 3 (lower is better)
Translates to: AIIEASNQGGTM*LTCQLLALLVT
Trigger: TGTCACCAATAAAGCCAGAAGCTGACATGTGAGGCACATGGTTCCCCCTTGGTTACTGGCTTCAATGATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp ATGGCCCAAGCAACTATGATCTCTTACCAGGATTATTaGAAGAGCTTCCTAACCGGTCTTTCAGCCGCTTCC +
Preference number: 3 (lower is better)
Translates to: MAQATMISYQDY*KSFLTGLSAAS
Trigger: GGAAGCGGCTGAAAGACCGGTTAGGAAGCTCTTGCAATAATCCTGGTAAGAGATCATAGTTGCTTGGGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp TTCCATGTCCTCTTTACAGCCAAACTCCTAAAGCGTTaGCTATTCCTGTTGTCTCTACCTCCTCTCCTTCCC +
Preference number: 3 (lower is better)
Translates to: FHVLFTAKLLKR*LFLLSLPPLLP
Trigger: GGGAAGGAGAGGAGGTAGAGACAACAGGAATAGGCAACGCTTTAGGAGTTTGGCTGTAAAGAGGACATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp CAGCTCATTTCCCTTCCTTTACCAACTCCCAAATCCTaGCTAAGAATCAGTGGTTCATCACCAGCCACAACC +
Preference number: 3 (lower is better)
Translates to: QLISLPLPTPKS*LRISGSSPATT
Trigger: GGTTGTGGCTGGTGATGAACCACTGATTCTTAGGCAGGATTTGGGAGTTGGTAAAGGAAGGGAAATGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp CCTATATGGCTTTGGGCTCAGAGAGCACATAAGGTATaGCCACAGTCCCTGGAAATGCTGAATGCATTCATC +
Preference number: 3 (lower is better)
Translates to: PIWLWAQRAHKV*PQSLEMLNAFI
Trigger: GATGAATGCATTCAGCATTTCCAGGGACTGTGGCCATACCTTATGTGCTCTCTGAGCCCAAAGCCATATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp CCCCCGATGAATATAGGTGTAGCAGAAGACAGGGAGTaGTCATCTTGGGGGAATAAGATGCTCCAAATACTC +
Preference number: 3 (lower is better)
Translates to: PPMNIGVAEDRE*SSWGNKMLQIL
Trigger: GAGTATTTGGAGCATCTTATTCCCCCAAGATGACCACTCCCTGTCTTCTGCTACACCTATATTCATCGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp TTGTGGCTAAGTGTAATTCTGATGCTGTTGGAGCACTaGCTCCTGTCACGTGGAGGAAAAGAGATTTCCCCT +
Preference number: 3 (lower is better)
Translates to: LWLSVILMLLEH*LLSRGGKEISP
Trigger: AGGGGAAATCTCTTTTCCTCCACGTGACAGGAGCCAGTGCTCCAACAGCATCAGAATTACACTTAGCCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGAGTCAGACCTGGGGTTaGCTTAGAGCCAAATTGAAC +
Preference number: 3 (lower is better)
Translates to: FTEKAGREKERKHYRLPESQTWG*LRAKLN
Trigger: GTTCAATTTGGCTCTAAGCAAACCCCAGGTCTGACT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTACCTCACACATAAGGTaGCATTCAGGTTCCTCACTC +
Preference number: 3 (lower is better)
Translates to: LGSSLETLSTMHVFELCATSHIR*HSGSSL
Trigger: GAGTGAGGAACCTGAATGCAACCTTATGTGTGAGGT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTCATTTACCAGCCCACTaGCATCTGTGCCCAAATGCA +
Preference number: 3 (lower is better)
Translates to: FATQPHSGCISCFHHHPLHLPAH*HLCPNA
Trigger: TGCATTTGGGCACAGATGCAAGTGGGCTGGTAAATG...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTGCTGGTCACCAGGGTaGCCCCCAGTAGGAACCAGA +
Preference number: 3 (lower is better)
Translates to: VPTIIQINTRKLPYLKLECWSPG*PPVGTR
Trigger: TCTGGTTCCTACTGGGGGCAACCCTGGTGACCAGCA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTTGGGAAAAGCTACCTTaGTGCTCACATAGCCTCTTT +
Preference number: 3 (lower is better)
Translates to: LGSSLETLSTMHVFELCAWEKLP*CSHSLF
Trigger: AAAGAGGCTATGTGAGCACAAAGGTAGCTTTTCCCA...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGAACTGGTTGAAACAATaGCCAACCACTGAGGACTTG +
Preference number: 3 (lower is better)
Translates to: FTEKAGREKERKHYRLPENWLKQ*PTTEDL
Trigger: CAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGGAGATTTCTCAGGATaGAGCTTCCTGAAACCTTTC +
Preference number: 3 (lower is better)
Translates to: LGSSLETLSTMHVFELCAGDFSG*SFLKPF
Trigger: GAAAGGTTTCAGGAAGCTCAATCCTGAGAAATCTCC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCGGAATCTCACAGTTTaGGATGGATTGGGTGTTGTT +
Preference number: 3 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSRNLTV*DGLGVV
Trigger: AACAACACCCAATCCATCCAAAACTGTGAGATTCCG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGCCCTCTGTCACTTACTaGAACACATGTAGTGTTCCA +
Preference number: 3 (lower is better)
Translates to: FTEKAGREKERKHYRLPEPSVTY*NTCSVP
Trigger: TGGAACACTACATGTGTTCAAGTAAGTGACAGAGGG...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGCTTTCTCTTTGCCTTaGCATAGAAAGCCCCAAGTC +
Preference number: 3 (lower is better)
Translates to: FATQPHSGCISCFHHHPLAFSLP*HRKPQV
Trigger: GACTTGGGGCTTTCTATGCAAAGGCAAAGAGAAAGC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp TTAAGCCCTTTTGGGAATCTTTCCTACCCTAGGTACTaGCAGAGGAAATATGGTGCCACCAGCCTGTCTTTG +
Preference number: 3 (lower is better)
Translates to: LSPFGNLSYPRY*QRKYGATSLSL
Trigger: CAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAGTACCTAGGGTAGGAAAGATTCCCAAAAGGGCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp CCATGTGCCTCACATGTCAGCTTCTGGCTTTATTGGTaGCACAAAAGGAAGCTCCAGTGTAGACTTCCTGTT +
Preference number: 3 (lower is better)
Translates to: PCASHVSFWLYW*HKRKLQCRLPV
Trigger: AACAGGAAGTCTACACTGGAGCTTCCTTTTGTGTCACCAATAAAGCCAGAAGCTGACATGTGAGGCACATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp GCATTCAGGTTCCTCACTCATCTCCGCTTTGGTCCTTaGTCTTTCAAGTTTCCCTACTTTCCGAAGCTATCA +
Preference number: 3 (lower is better)
Translates to: AFRFLTHLRFGP*SFKFPYFPKLS
Trigger: TGATAGCTTCGGAAAGTAGGGAAACTTGAAAGAGCAAGGACCAAAGCGGAGATGAGTGAGGAACCTGAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp AGAAGTCCCTCCCTGGGCGTCACATTCTCTATGATCTaGTATTTCCATGTCCTCTTTACAGCCAAACTCCTA +
Preference number: 3 (lower is better)
Translates to: RSPSLGVTFSMI*YFHVLFTAKLL
Trigger: TAGGAGTTTGGCTGTAAAGAGGACATGGAAATAGCAGATCATAGAGAATGTGACGCCCAGGGAGGGACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp TGCAGCTGTGAATTTGCAACGCAACCCCATAGTGGATaGATATCATGTTTCCATCATCACCCCCTTACACAC +
Preference number: 3 (lower is better)
Translates to: CSCEFATQPHSG*ISCFHHHPLTH
Trigger: GTGTGTAAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAATTCACAGCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp CTTAACTGTCTGCTCTGTAGCAGTTGTAATCAGTTTTaGGGGGAAGAAGCCTGCTCGTCTAGCTTCAGGTTA +
Preference number: 3 (lower is better)
Translates to: LNCLLCSSCNQF*GEEACSSSFRL
Trigger: TAACCTGAAGCTAGACGAGCAGGCTTCTTCCCCCCAAAACTGATTACAACTGCTACAGAGCAGACAGTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp TCCTTTACCAACTCCCAAATCCTGCCTAAGAATCAGTaGTTCATCACCAGCCACAACCCTGGCAATTCCTTT +
Preference number: 3 (lower is better)
Translates to: SFTNSQILPKNQ*FITSHNPGNSF
Trigger: AAAGGAATTGCCAGGGTTGTGGCTGGTGATGAACCACTGATTCTTAGGCAGGATTTGGGAGTTGGTAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTAATAAAGAGCCGCTATaGGCACCATTGCTCACATAC +
Preference number: 3 (lower is better)
Translates to: FATQPHSGCISCFHHHPLNKEPL*APLLTY
Trigger: GTATGTGAGCAATGGTGCCAATAGCGGCTCTTTATT...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGTTGTTCCCTACTCTATaGCTCTCAGTGCTCTCTGCT +
Preference number: 3 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVLFPTL*LSVLSA
Trigger: AGCAGAGAGCACTGAGAGCAATAGAGTAGGGAACAA...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGCACTTGATCTTGAGTaGAAGCACTCAGGAACAAGA +
Preference number: 3 (lower is better)
Translates to: FATQPHSGCISCFHHHPLALDLE*KHSGTR
Trigger: TCTTGTTCCTGAGTGCTTCAACTCAAGATCAAGTGC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp ATAAACACCATCTTGATTTCTGTTGCCAGCGGAGACTaGAAGAGCTCCCTTGGTTCTAGATTGCTGTTCGCT +
Preference number: 3 (lower is better)
Translates to: INTILISVASGD*KSSLGSRLLFA
Trigger: AGCGAACAGCAATCTAGAACCAAGGGAGCTCTTTCAGTCTCCGCTGGCAACAGAAATCAAGATGGTGTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp ATAGGAGTCAGACCTGGGGTTTGCTTAGAGCCAAATTaGACCCTATGTAAAACCCTGGCCAAAGTGCATGAA +
Preference number: 3 (lower is better)
Translates to: IGVRPGVCLEPN*TLCKTLAKVHE
Trigger: TTCATGCACTTTGGCCAGGGTTTTACATAGGGTTCAATTTGGCTCTAAGCAAACCCCAGGTCTGACTCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp CAATTACCTCAACTCTTATCCTCCCTTTGGGAGAAGTaGTCCTGTAGACAAAGCCTCAGAAAGGGTGAGAAG +
Preference number: 3 (lower is better)
Translates to: QLPQLLSSLWEK*SCRQSLRKGEK
Trigger: CTTCTCACCCTTTCTGAGGCTTTGTCTACAGGATCACTTCTCCCAAAGGGAGGATAAGAGTTGAGGTAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp ACAGTGGGGGCAGACAATTCAGGCAGCATTACTCGCTaGGCTAGACTGAGAGTTAGAAATTTGGACAAGTTT +
Preference number: 3 (lower is better)
Translates to: TVGADNSGSITR*ARLRVRNLDKF
Trigger: AAACTTGTCCAAATTTCTAACTCTCAGTCTAGCTCAGCGAGTAATGCTGCCTGAATTGTCTGCCCCCACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp CTCTCAACACAGCAGTCCCAAAGCTTCCTCTTCAACTaGAGTCAGATCATATCACTCTATGCTCCGAACCTT +
Preference number: 3 (lower is better)
Translates to: LSTQQSQSFLFN*SQIISLYAPNL
Trigger: AAGGTTCGGAGCATAGAGTGATATGATCTGACTTCAGTTGAAGAGGAAGCTTTGGGACTGCTGTGTTGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp CCACTGAAACAGCTCTCTTCCAGGTCATCAATGGGATaGCCTCCATGTTTCCAGATAGTCTTATCCTACTCA +
Preference number: 3 (lower is better)
Translates to: PLKQLSSRSSMG*PPCFQIVLSYS
Trigger: TGAGTAGGATAAGACTATCTGGAAACATGGAGGTCATCCCATTGATGACCTGGAAGAGAGCTGTTTCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp TATGTAAAACTGAGAACTACTGCTCCAGGTAACCTTTaGTGGGGAGGGCAGATAGACCAACATCTGGGTTTC +
Preference number: 3 (lower is better)
Translates to: YVKLRTTAPGNL*WGGQIDQHLGF
Trigger: GAAACCCAGATGTTGGTCTATCTGCCCTCCCCATCAAAGGTTACCTGGAGCAGTAGTTCTCAGTTTTACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp AAGAACATGGGAATATTAGGTGCTCCTGAGGGTATCTaGGGAATCTCACAGTTTTGGATGGATTGGGTGTTG +
Preference number: 3 (lower is better)
Translates to: KNMGILGAPEGI*GISQFWMDWVL
Trigger: CAACACCCAATCCATCCAAAACTGTGAGATTCCGCAGATACCCTCAGGAGCACCTAATATTCCCATGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp GGATTTTCCCCTCAATCACAACATGGCTGTGGCCAGTaGAGGGAAATACATATGAAGGATGTTTCCCAAGTT +
Preference number: 3 (lower is better)
Translates to: GFSPQSQHGCGQ*REIHMKDVSQV
Trigger: AACTTGGGAAACATCCTTCATATGTATTTCCCTGCACTGGCCACAGCCATGTTGTGATTGAGGGGAAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp AGTGCCAAGGCTCTGAGGAATTCTACTCATCTACTCTaGTTTTCACCTTCAGTTCTTTCAGGAGCCCTTAAC +
Preference number: 3 (lower is better)
Translates to: SAKALRNSTHLL*FSPSVLSGALN
Trigger: GTTAAGGGCTCCTGAAAGAACTGAAGGTGAAAAGCAGAGTAGATGAGTAGAATTCCTCAGAGCCTTGGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp TCACCTTCTCCAAAACACAGATTCTACACACCAGAGTaGCAAGGCTCTGAGGAATTCTACTCATCTACTCTG +
Preference number: 3 (lower is better)
Translates to: SPSPKHRFYTPE*QGSEEFYSSTL
Trigger: CAGAGTAGATGAGTAGAATTCCTCAGAGCCTTGGCACTCTGGTGTGTAGAATCTGTGTTTTGGAGAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp CCTCCACCTAGATGCTTCACTATCCTCCTTGCTTCCTaGCTATGTGAAACCTTGATATTTTTCTTGCTCCTG +
Preference number: 3 (lower is better)
Translates to: PPPRCFTILLAS*LCETLIFFLLL
Trigger: CAGGAGCAAGAAAAATATCAAGGTTTCACATAGGCAGGAAGCAAGGAGGATAGTGAAGCATCTAGGTGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp AAAGCATACTCCCATTATCCCATTTACCAGCCCACTTaGATCTGTGCCCAAATGCACTATCTCCCTGCTATT +
Preference number: 3 (lower is better)
Translates to: KAYSHYPIYQPT*ICAQMHYLPAI
Trigger: AATAGCAGGGAGATAGTGCATTTGGGCACAGATGCAAGTGGGCTGGTAAATGGGATAATGGGAGTATGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp CATAGCCAATGGCATAATGAGATTTACAGAGAAGGCTaGCCGGGAGAAGGAACGAAAACATTATCGGTTACC +
Preference number: 3 (lower is better)
Translates to: HSQWHNEIYREG*PGEGTKTLSVT
Trigger: GGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAATCTCATTATGCCATTGGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp ATTCCTTGCCCATCTTCTAACTTCCACCCAGATATCTaGCTTCTGTCAATAGGCCTTACCCAAACAGGGTTA +
Preference number: 3 (lower is better)
Translates to: IPCPSSNFHPDI*LLSIGLTQTGL
Trigger: TAACCCTGTTTGGGTAAGGCCTATTGACAGAAGCCAGATATCTGGGTGGAAGTTAGAAGATGGGCAAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGTCCCTTGGTTCTAGATaGCTGTTCGCTAGGTTAGTT +
Preference number: 3 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVSLGSR*LFARLV
Trigger: AACTAACCTAGCGAACAGCAATCTAGAACCAAGGGA...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAAGCAAAAGGAGGAAGTaGGTGATTATGTTGGTTTGC +
Preference number: 3 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKSKRRK*VIMLVC
Trigger: GCAAACCAACATAATCACCAACTTCCTCCTTTTGCT...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTAACATTGTTTGTGTTTaGAGGATGGGCTGCTCAGAG +
Preference number: 3 (lower is better)
Translates to: LCIESPKSHSLISSKPLLNIVCV*RMGCSE
Trigger: CTCTGAGCAGCCCATCCTCAAAACACAAACAATGTT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGTTCCTGAAGGCTCTTTaGCCATGTAGCACTCTGGAA +
Preference number: 3 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGFLKAL*PCSTLE
Trigger: TTCCAGAGTGCTACATGGCAAAAGAGCCTTCAGGAA...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCAAACTGCAAAGACCCTaGGGATTAAATGAAATCTGC +
Preference number: 3 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSKLQRP*GLNEIC
Trigger: GCAGATTTCATTTAATCCCAAGGGTCTTTGCAGTTT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp ATGGATTCTGAAGAACATGGGAATATTAGGTGCTCCTaGGGGTATCTGCGGAATCTCACAGTTTTGGATGGA +
Preference number: 3 (lower is better)
Translates to: MDSEEHGNIRCS*GYLRNLTVLDG
Trigger: TCCATCCAAAACTGTGAGATTCCGCAGATACCCTCAGGAGCACCTAATATTCCCATGTTCTTCAGAATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp TTGTCAGTGGAAATGCTGAGATTTAAGCATTGCCACTaGAAGGAGTTCATACAGGACCACACTCACCAACCA +
Preference number: 3 (lower is better)
Translates to: LSVEMLRFKHCH*KEFIQDHTHQP
Trigger: TGGTTGGTGAGTGTGGTCCTGTATGAACTCCTTTCAGTGGCAATGCTTAAATCTCAGCATTTCCACTGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp TCCATGAAGAGCTCCTTAAACAGGAGGAAAAGTCTCTaGCACCCAAGTGAAGAAAGCAAAAGCTCTGCTGTA +
Preference number: 3 (lower is better)
Translates to: SMKSSLNRRKSL*HPSEESKSSAV
Trigger: TACAGCAGAGCTTTTGCTTTCTTCACTTGGGTGTCAGAGACTTTTCCTCCTGTTTAAGGAGCTCTTCATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp CAGACAATTCAGGCAGCATTACTCGCTGAGCTAGACTaGGAGTTAGAAATTTGGACAAGTTTTGGTTCAGCC +
Preference number: 3 (lower is better)
Translates to: QTIQAALLAELD*ELEIWTSFGSA
Trigger: GGCTGAACCAAAACTTGTCCAAATTTCTAACTCTCAGTCTAGCTCAGCGAGTAATGCTGCCTGAATTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp GTTAGTCCCCTGAAGCCAGTCCCTCTATGTTTGTATTaGATCCCATGCCCTCTCACTTCATCAAAGACATTA +
Preference number: 3 (lower is better)
Translates to: VSPLKPVPLCLY*IPCPLTSSKTL
Trigger: TAATGTCTTTGATGAAGTGAGAGGGCATGGGATTCAATACAAACATAGAGGGACTGGCTTCAGGGGACTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp TCTGAGCTAATCCATTTAAGAGATTCCAGGTGTGGGTaGGGCAGGCTGTATAAAGAACAGACACTTGGCATA +
Preference number: 3 (lower is better)
Translates to: SELIHLRDSRCG*GRLYKEQTLGI
Trigger: TATGCCAAGTGTCTGTTCTTTATACAGCCTGCCTCACCCACACCTGGAATCTCTTAAATGGATTAGCTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp ATCCCATTTACCAGCCCACTTGCATCTGTGCCCAAATaGACTATCTCCCTGCTATTAATACAAACAAACCTG +
Preference number: 3 (lower is better)
Translates to: IPFTSPLASVPK*TISLLLIQTNL
Trigger: CAGGTTTGTTTGTATTAATAGCAGGGAGATAGTGCATTTGGGCACAGATGCAAGTGGGCTGGTAAATGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp AATTCCCATATCCTGGCCTCTCAGTTCCTTGACCCCTaGTCCTTCTATAACCTTTTCCTCTATCTTATCTCA +
Preference number: 3 (lower is better)
Translates to: NSHILASQFLDP*SFYNLFLYLIS
Trigger: TGAGATAAGATAGAGGAAAAGGTTATAGAAGGAGCAGGGGTCAAGGAACTGAGAGGCCAGGATATGGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp GGATTAGAAGTAAATAGGAGGCCCGCTTTCCCCAGATaGACATACATAGTGGTTCACATTCTGGCTGTATAT +
Preference number: 3 (lower is better)
Translates to: GLEVNRRPAFPR*TYIVVHILAVY
Trigger: ATATACAGCCAGAATGTGAACCACTATGTATGTGCATCTGGGGAAAGCGGGCCTCCTATTTACTTCTAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp CCAGAGCCTCTTTCCTTTCACAAGCAGTGTGCTAAATaGTCTCACATAGATGCTTTTGCTTCCTCACCTAAA +
Preference number: 3 (lower is better)
Translates to: PEPLSFHKQCAK*SHIDAFASSPK
Trigger: TTTAGGTGAGGAAGCAAAAGCATCTATGTGAGACCATTTAGCACACTGCTTGTGAAAGGAAAGAGGCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp TCATTTGGGATTTTCCCCTCAATCACAACATGGCTGTaGCCAGTGCAGGGAAATACATATGAAGGATGTTTC +
Preference number: 3 (lower is better)
Translates to: SFGIFPSITTWL*PVQGNTYEGCF
Trigger: GAAACATCCTTCATATGTATTTCCCTGCACTGGCCACAGCCATGTTGTGATTGAGGGGAAAATCCCAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp ATGGAATCATTTGGGATTTTCCCCTCAATCACAACATaGCTGTGGCCAGTGCAGGGAAATACATATGAAGGA +
Preference number: 3 (lower is better)
Translates to: MESFGIFPSITT*LWPVQGNTYEG
Trigger: TCCTTCATATGTATTTCCCTGCACTGGCCACAGCCATGTTGTGATTGAGGGGAAAATCCCAAATGATTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp AATATAGGTGTAGCAGAAGACAGGGAGTGGTCATCTTaGGGGAATAAGATGCTCCAAATACTCATCAGCTGT +
Preference number: 3 (lower is better)
Translates to: NIGVAEDREWSS*GNKMLQILISC
Trigger: ACAGCTGATGAGTATTTGGAGCATCTTATTCCCCCAAGATGACCACTCCCTGTCTTCTGCTACACCTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGTCACATAGCCTCTTTTaGGTTCTCCCAGCTTCACTC +
Preference number: 3 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMSHSLF*VLPASL
Trigger: GAGTGAAGCTGGGAGAACCAAAAAGAGGCTATGTGA...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCTTGGTTCAAACTGGTaGAAACAATTGCCAACCACT +
Preference number: 3 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVLGSNW*KQLPTT
Trigger: AGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGGAGGGAAACAAGGTGTaGCAGGAAGGTAGAAGGGCT +
Preference number: 3 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEEGNKV*QEGRRA
Trigger: AGCCCTTCTACCTTCCTGCAACACCTTGTTTCCCTC...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGTGTACATGCATCACTTaGAAGGGTGTGCAAAGTCTC +
Preference number: 3 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGCTCIT*KGVQSL
Trigger: GAGACTTTGCACACCCTTCAAAGTGATGCATGTACA...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTAAGAGGAAAAAGGAATaGCCGGTGAGAATATTGCTA +
Preference number: 3 (lower is better)
Translates to: FATQPHSGCISCFHHHPLKRKKE*PVRILL
Trigger: TAGCAATATTCTCACCGGCAATTCCTTTTTCCTCTT...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCAGCTTCTGGCTTTATaGGTGACACAAAAGGAAGCT +
Preference number: 3 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGQLLAL*VTQKEA
Trigger: AGCTTCCTTTTGTGTCACCAATAAAGCCAGAAGCTG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCAAATTTGGACAAGTTTaGGTTCAGCCAAGTTTTGGT +
Preference number: 3 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSKFGQV*VQPSFG
Trigger: ACCAAAACTTGGCTGAACCAAAACTTGTCCAAATTT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTTGTAAGAGAAGGTTGTaGCAAGATTCTCTGATCTGC +
Preference number: 3 (lower is better)
Translates to: LCIESPKSHSLISSKPLLCKRRL*QDSLIC
Trigger: GCAGATCAGAGAATCTTGCAACAACCTTCTCTTACA...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTCATCTCCTGGAGCTTaGAACAATCCTCCACCCTGG +
Preference number: 3 (lower is better)
Translates to: VPTIIQINTRKLPYLKLESSPGA*NNPPPW
Trigger: CCAGGGTGGAGGATTGTTCAAAGCTCCAGGAGATGA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp AAAACACAGATTCTACACACCAGAGTGCCAAGGCTCTaGGGAATTCTACTCATCTACTCTGCTTTTCACCTT +
Preference number: 3 (lower is better)
Translates to: KTQILHTRVPRL*GILLIYSAFHL
Trigger: AAGGTGAAAAGCAGAGTAGATGAGTAGAATTCCTCAGAGCCTTGGCACTCTGGTGTGTAGAATCTGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp TACGAGCTCCAAGAGTTTCTTCAGAGGGACAGAGACTaGCACTGGCTAGAAAGAATGATTGATAGATTGCTA +
Preference number: 3 (lower is better)
Translates to: YELQEFLQRDRD*HWLERMIDRLL
Trigger: TAGCAATCTATCAATCATTCTTTCTAGCCAGTGTCAGTCTCTGTCCCTCTGAAGAAACTCTTGGAGCTCGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp TTACCAAGAAATAACCAAAGTGAATGCGCTGATCACTaGAGGTGTGCAAGAGTCTCAGGAGGAATTCTGTCA +
Preference number: 3 (lower is better)
Translates to: LPRNNQSECADH*RCARVSGGILS
Trigger: TGACAGAATTCCTCCTGAGACTCTTGCACACCTTCAGTGATCAGCGCATTCACTTTGGTTATTTCTTGGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp CATTTTTGTTCTCACTCTTCCTGCCGGATGGCTATATaGCTCATTCATGCTTTCTTCCTTCCAAAACCTCCA +
Preference number: 3 (lower is better)
Translates to: HFCSHSSCRMAI*LIHAFFLPKPP
Trigger: TGGAGGTTTTGGAAGGAAGAAAGCATGAATGAGTCATATAGCCATCCGGCAGGAAGAGTGAGAACAAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp AAGATAAGGAGAAGAGGGTCAAGCTCAGATATACCATaGCAAGTCAATGCTAAGGAGATAAGAGGAAGAGCA +
Preference number: 3 (lower is better)
Translates to: KIRRRGSSSDIP*QVNAKEIRGRA
Trigger: TGCTCTTCCTCTTATCTCCTTAGCATTGACTTGCCATGGTATATCTGAGCTTGACCCTCTTCTCCTTATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCAAGGTTGCCTTCTCTaGAGGCACCTGACTACACAT +
Preference number: 3 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEQGCLL*RHLTTH
Trigger: ATGTGTAGTCAGGTGCCTCAAGAGAAGGCAACCTTG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGTCAAGGGTCAGATTATaGTCAGTGGAAATGCTGAGA +
Preference number: 3 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGSRVRL*SVEMLR
Trigger: TCTCAGCATTTCCACTGACAATAATCTGACCCTTGA...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTTTGACTCCACATCTCTaGCTTTCATTATATTCACCT +
Preference number: 3 (lower is better)
Translates to: FATQPHSGCISCFHHHPLLTPHL*LSLYSP
Trigger: AGGTGAATATAATGAAAGCAAGAGATGTGGAGTCAA...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp AACCACATAATCACCCCAGCAATTATATTCAAAGCATaGAGCAGCTCCAGAAACTCACTGTACAGAGCTCTT +
Preference number: 3 (lower is better)
Translates to: NHIITPAIIFKA*SSSRNSLYRAL
Trigger: AAGAGCTCTGTACAGTGAGTTTCTGGAGCTGCTTCATGCTTTGAATATAATTGCTGGGGTGATTATGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp AAGCCTGAATATTTCTGTCAAACCTTGAGGGATCAATaGTCCACAAGCCAGGTAGAGCAAAGAGAAAACACT +
Preference number: 3 (lower is better)
Translates to: KPEYFCQTLRDQ*STSQVEQRENT
Trigger: AGTGTTTTCTCTTTGCTCTACCTGGCTTGTGGATCATTGATCCCTCAAGGTTTGACAGAAATATTCAGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp GAAACAATCAGCAAAACAAGGGCTGGTTTGCTTTTCTaGCACCTCCAAGCAATGGAAGTATGCATTAAAGAG +
Preference number: 3 (lower is better)
Translates to: ETISKTRAGLLF*HLQAMEVCIKE
Trigger: CTCTTTAATGCATACTTCCATTGCTTGGAGGTGTCAGAAAAGCAAACCAGCCCTTGTTTTGCTGATTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp AGCCAAATTGAACCCTATGTAAAACCCTGGCCAAAGTaGATGAACATTTCTCACAAACCAGTAAGAAGACTG +
Preference number: 3 (lower is better)
Translates to: SQIEPYVKPWPK*MNISHKPVRRL
Trigger: CAGTCTTCTTACTGGTTTGTGAGAAATGTTCATGCACTTTGGCCAGGGTTTTACATAGGGTTCAATTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp GATGAAGGGAGACACAGCCAAAATTCAGGTAATACATaGCCATCTCTGTCTGTATATAAGCCAAACAATCAC +
Preference number: 3 (lower is better)
Translates to: DEGRHSQNSGNT*PSLSVYKPNNH
Trigger: GTGATTGTTTGGCTTATATACAGACAGAGATGGCCATGTATTACCTGAATTTTGGCTGTGTCTCCCTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp TCAACATACAAACTTCAAGAGGGTATGGACTTTGTGTaGTTCGTTCTTATATTCCAGCACCTAGAACAGCCT +
Preference number: 3 (lower is better)
Translates to: STYKLQEGMDFV*FVLIFQHLEQP
Trigger: AGGCTGTTCTAGGTGCTGGAATATAAGAACGAACCACACAAAGTCCATACCCTCTTGAAGTTTGTATGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCACTGCTTGGGGATATaGAAAGAAACAATAGAAAGA +
Preference number: 3 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYHCLGI*KETIER
Trigger: TCTTTCTATTGTTTCTTTCAATATCCCCAAGCAGTG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCAAATGTTATTCAGCTaGTCTGGATTATGGGACACA +
Preference number: 3 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGQMLFS*SGLWDT
Trigger: TGTGTCCCATAATCCAGACAAGCTGAATAACATTTG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCCACTGAAGTTCATTTaGGAATCATGGCCACCCAGA +
Preference number: 3 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEPLKFI*ESWPPR
Trigger: TCTGGGTGGCCATGATTCCAAAATGAACTTCAGTGG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCTCTTACCAGGATTATaGCAAGAGCTTCCTAACCGG +
Preference number: 3 (lower is better)
Translates to: VPTIIQINTRKLPYLKLELLPGL*QELPNR
Trigger: CCGGTTAGGAAGCTCTTGCAATAATCCTGGTAAGAG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGAAACAATCACACTGCTaGGGGATATTGAAAGAAACA +
Preference number: 3 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGKQSHC*GILKET
Trigger: TGTTTCTTTCAATATCCCCAAGCAGTGTGATTGTTT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGGAGACGATAACTAGGTaGTTTCATCACAAAGAACAT +
Preference number: 3 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGETITR*FHHKEH
Trigger: ATGTTCTTTGTGATGAAACAACCTAGTTATCGTCTC...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp TCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTaGGGACTTGTTTATGTACCTTGTTCTTGCAGGATT +
Preference number: 3 (lower is better)
Translates to: SWFKLVETIANH*GLVYVPCSCRI
Trigger: AATCCTGCAAGAACAAGGTACATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp TTTAGCCTTCCTGGAAAGTTCTTGGTTCAAACTGGTTaGAACAATTGCCAACCACTGAGGACTTGTTTATGT +
Preference number: 3 (lower is better)
Translates to: FSLPGKFLVQTG*NNCQPLRTCLC
Trigger: ACATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAACTTTCCAGGAAGGCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp AATATGTCACCTTTCCTGGGATTACTTTCATTCGAATaGCAGACAGCTCAGCTCAGTGCTAAAGCAACAAAT +
Preference number: 3 (lower is better)
Translates to: NMSPFLGLLSFE*QTAQLSAKATN
Trigger: ATTTGTTGCTTTAGCACTGAGCTGAGCTGTCTGTCATTCGAATGAAAGTAATCCCAGGAAAGGTGACATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp CCTGGGAGAGAGAGAACAGATAAATTATTGAATCCGTaGAGGCATTTATCCCTATTCCTTGAGAATAGGGAT +
Preference number: 3 (lower is better)
Translates to: PGRERTDKLLNP*RHLSLFLENRD
Trigger: ATCCCTATTCTCAAGGAATAGGGATAAATGCCTTCACGGATTCAATAATTTATCTGTTCTCTCTCTCCCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp GAGGACCAGAGAACTAAGATTAAAACCAGAATGTATTaGCTCCCAATGGTAATTGTCAATGAGGTTGAAGAG +
Preference number: 3 (lower is better)
Translates to: EDQRTKIKTRMY*LPMVIVNEVEE
Trigger: CTCTTCAACCTCATTGACAATTACCATTGGGAGGCAATACATTCTGGTTTTAATCTTAGTTCTCTGGTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp ATTTTCACTAGGTATCTCCCAAGTTGTCACAAGTTTTaGCCTACCTTGCCAATAATAATTGTCCTACCCACT +
Preference number: 3 (lower is better)
Translates to: IFTRYLPSCHKF*PTLPIIIVLPT
Trigger: AGTGGGTAGGACAATTATTATTGGCAAGGTAGGGCAAAACTTGTGACAACTTGGGAGATACCTAGTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp AAGAGAAGGTTGTTGCAAGATTCTCTGATCTGCGGGTaGTTAATAAATAATTCACCATTGCAACCTTGTGAC +
Preference number: 3 (lower is better)
Translates to: KRRLLQDSLICG*LINNSPLQPCD
Trigger: GTCACAAGGTTGCAATGGTGAATTATTTATTAAGCACCCGCAGATCAGAGAATCTTGCAACAACCTTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp GGTTGTAAGAGAAGGTTGTTGCAAGATTCTCTGATCTaGGGGTGCTTAATAAATAATTCACCATTGCAACCT +
Preference number: 3 (lower is better)
Translates to: GCKRRLLQDSLI*GCLINNSPLQP
Trigger: AGGTTGCAATGGTGAATTATTTATTAAGCACCCGCAGATCAGAGAATCTTGCAACAACCTTCTCTTACAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CCA 72 bp TTTGTTGACTTCAATATCTATATAATTCCCATATCCTaGCCTCTCAGTTCCTTGACCCCTGCTCCTTCTATA +
Preference number: 3 (lower is better)
Translates to: FVDFNIYIIPIS*PLSSLTPAPSI
Trigger: TATAGAAGGAGCAGGGGTCAAGGAACTGAGAGGCCAGGATATGGGAATTATATAGATATTGAAGTCAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAACGTACTTTCCAGTTaGTTCAAGAATCCACTCTGC +
Preference number: 3 (lower is better)
Translates to: VPTIIQINTRKLPYLKLENVLSS*FKNPLC
Trigger: GCAGAGTGGATTCTTGAACAAACTGGAAAGTACGTT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAACAGTTTTGGATGGATaGGGTGTTGTTTCATACCCA +
Preference number: 3 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVTVLDG*GVVSYP
Trigger: TGGGTATGAAACAACACCCAATCCATCCAAAACTGT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp ACATACAAAAACAGACATTCACAGGGTGTCAAGCAATaGCAGGGCCTTTTTAGAGAGATGATGATTGAAAGA +
Preference number: 3 (lower is better)
Translates to: TYKNRHSQGVKQ*QGLFREMMIER
Trigger: TCTTTCAATCATCATCTCTCTAAAAAGGCCCTGTCATTGCTTGACACCCTGTGAATGTCTGTTTTTGTATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp AAAGTCCAAGTGAGTAGGCTTCAGGTGAGGTTAAATTaGTTGAATTTGTGCTCTTCACGTAGGTTTAAGACT +
Preference number: 3 (lower is better)
Translates to: KVQVSRLQVRLN*LNLCSSRRFKT
Trigger: AGTCTTAAACCTACGTGAAGAGCACAAATTCAATCAATTTAACCTCACCTGAAGCCTACTCACTTGGACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp TTTAATGCGTACTCAGTGCATAAAGTAAGGTATGACTaGGTTGGCTGTGATACCTTAAGAACTCAAGATGTG +
Preference number: 3 (lower is better)
Translates to: FNAYSVHKVRYD*VGCDTLRTQDV
Trigger: CACATCTTGAGTTCTTAAGGTATCACAGCCAACTCAGTCATACCTTACTTTATGCACTGAGTACGCATTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp TGGCACTCACCCTTGTCATTGGAGTCTTTGTTTTATTaGAGGTGTTGTGATCATGATCAAAGCTTTCATGAT +
Preference number: 3 (lower is better)
Translates to: WHSPLSLESLFY*RCCDHDQSFHD
Trigger: ATCATGAAAGCTTTGATCATGATCACAACACCTTCAATAAAACAAAGACTCCAATGACAAGGGTGAGTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp CTCATTTCCTCCAAACCTTTACTTAAATGTCATCTTTaGTTACTCAAAAATAGCAACCCCACACCCATCCTA +
Preference number: 3 (lower is better)
Translates to: LISSKPLLKCHL*LLKNSNPTPIL
Trigger: TAGGATGGGTGTGGGGTTGCTATTTTTGAGTAAGCAAAGATGACATTTAAGTAAAGGTTTGGAGGAAATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAACTTGTTTATGTACCTaGTTCTTGCAGGATTGCTCA +
Preference number: 3 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVTCLCT*FLQDCS
Trigger: TGAGCAATCCTGCAAGAACAAGGTACATAAACAAGT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGGGTGATTATGTTGGTTaGCAGCAATGGTTTTGGATA +
Preference number: 3 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEGDYVG*QQWFWI
Trigger: TATCCAAAACCATTGCTGCAAACCAACATAATCACC...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAAGTTGTCACAAGTTTaGCCCTACCTTGCCAATAAT +
Preference number: 3 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEKLSQV*PYLANN
Trigger: ATTATTGGCAAGGTAGGGCAAAACTTGTGACAACTT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTGGGCAGAAGCAAAGTaGCTTTCCAATCCTTTTTAT +
Preference number: 3 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEWAEAK*LSNPFY
Trigger: ATAAAAAGGATTGGAAAGCAACTTTGCTTCTGCCCA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp GGAAATACATATGAAGGATGTTTCCCAAGTTCTGGCTaGGGATACACAGTGACAGATTTTGAAATAACAAAG +
Preference number: 3 (lower is better)
Translates to: GNTYEGCFPSSG*GYTVTDFEITK
Trigger: CTTTGTTATTTCAAAATCTGTCACTGTGTATCCTCAGCCAGAACTTGGGAAACATCCTTCATATGTATTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp TACTGTATCATGTCATACATGCGTTTTTGGCACTACTaGCACCAGCAACATTTAATGGAATCATTTGGGATT +
Preference number: 3 (lower is better)
Translates to: YCIMSYMRFWHY*HQQHLMESFGI
Trigger: AATCCCAAATGATTCCATTAAATGTTGCTGGTGTCAGTAGTGCCAAAAACGCATGTATGACATGATACAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp CTACCCAAAGCATCTGAAAAGCTGATACCTAAAATTTaGTCAATATCCTTCATAGTTTCTCCCTCTGTCACT +
Preference number: 3 (lower is better)
Translates to: LPKASEKLIPKI*SISFIVSPSVT
Trigger: AGTGACAGAGGGAGAAACTATGAAGGATATTGATCAAATTTTAGGTATCAGCTTTTCAGATGCTTTGGGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp AGCTCTTTCACTGTTTTTGGTTTAAGCATAATGCTGTaGGCCAAAATTTCTTCTGCAGCCCAAACTAAAGAT +
Preference number: 3 (lower is better)
Translates to: SSFTVFGLSIML*AKISSAAQTKD
Trigger: ATCTTTAGTTTGGGCTGCAGAAGAAATTTTGGCTCACAGCATTATGCTTAAACCAAAAACAGTGAAAGAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR TCA 72 bp CATTTCTCAGAACCAAGCTTTTTGTCTGCTTGTCACTaGATCTATTTCCCATTCAACCTTCTGTTTCTCATT +
Preference number: 3 (lower is better)
Translates to: HFSEPSFLSACH*IYFPFNLLFLI
Trigger: AATGAGAAACAGAAGGTTGAATGGGAAATAGATTCAGTGACAAGCAGACAAAAAGCTTGGTTCTGAGAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAATGAAAAGATCAGTTaGGGAAAAGCTACCTTTGTG +
Preference number: 3 (lower is better)
Translates to: VPTIIQINTRKLPYLKLENEKIS*GKATFV
Trigger: CACAAAGGTAGCTTTTCCCAAACTGATCTTTTCATT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGATCAGGCTTGTATGTTaGAACTTAATTAGACAGAGG +
Preference number: 3 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEIRLVC*NLIRQR
Trigger: CCTCTGTCTAATTAAGTTCAAACATACAAGCCTGAT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR GCA 72 bp TTAAGCAAAAGGAGGAAGTTGGTGATTATGTTGGTTTaGAGCAATGGTTTTGGATATTTGAGTCAAGATGAA +
Preference number: 3 (lower is better)
Translates to: LSKRRKLVIMLV*SNGFGYLSQDE
Trigger: TTCATCTTGACTCAAATATCCAAAACCATTGCTGCAAACCAACATAATCACCAACTTCCTCCTTTTGCTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp GACCCTGAATCACTCCCAGGTGGTGAGCATTTCCACTaGCACCTTCCTCATGCCCTGGGGCCTGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: DPESLPGGEHFH*HLPHALGPGGG
Trigger: TCCACCTCCAGGCCCCAGGGCATGAGGAAGGTGCAAGTGGAAATGCTCACCACCTGGGAGTGATTCAGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCACGAGCTCTGCTGCCTaGCACGGCCAGGACGGCCAA +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTTSSAA*HGQDGQ
Trigger: TTGGCCGTCCTGGCCGTGTCAGGCAGCAGAGCTCGT...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCTGCCTGCCCGAGTTCTaGCCCGTCACCGTCGTGGAG +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGCLPEF*PVTVVE
Trigger: CTCCACGACGGTGACGGGTCAGAACTCGGGCAGGCA...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGAGCTGCGGCAGAAGTTaGCCCCGGACCGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPESCGRS*PRTGPP
Trigger: GGGAGGACCGGTCCGGGGGCAACTTCTGCCGCAGCT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCAAGCCTCACACCGGATaGACGCCTGCCTGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTKPHTG*TPACPS
Trigger: ACTCGGGCAGGCAGGCGTGCATCCGGTGTGAGGCTT...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCGTCTGCGGAGAGGGGTaGCCGGTGGCTGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSVCGEG*PVAGNG
Trigger: TCCATTCCCAGCCACCGGCCACCCCTCTCCGCAGAC...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCATAGAGGAGCCCCCGTaGATGCCCAGGATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTIEEPP*MPRMGV
Trigger: CACCCCCATCCTGGGCATCCACGGGGGCTCCTCTAT...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGACTGGGGCAGCCGGCTaGTCCAGTTCCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPETGAAG*SSSCRE
Trigger: CTCCCTGCAGGAACTGGACCAGCCGGCTGCCCCAGT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCCCGGAAGTCCGGCCTaGCTTTCGACGCCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVPGSPA*LSTPPP
Trigger: TGGCGGGGGCGTCGAAAGCCAGGCCGGACTTCCGGG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCCTGGGGCCTGGAGGTaGAGATGCCCTTCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSPGAWR*RCPSCP
Trigger: GGGGCAAGAAGGGCATCTCCACCTCCAGGCCCCAGG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp CTCCTCCCTCATTGGCCTCCCGGCTCTTCCTCAAGTTaGCCAAGCATTTGGTTTGACAGCAGGGCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: LLPHWPPGSSSS*PSIWFDSRAFA
Trigger: TGCAAAGGCCCTGCTGTCAAACCAAATGCTTGGCAAACTTGAGGAAGAGCCGGGAGGCCAATGAGGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCAGGGCGCTCTGCGGTaGGCCATTCACACCAGACAG +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSQGALR*AIHTRQ
Trigger: CTGTCTGGTGTGAATGGCTCACCGCAGAGCGCCCTG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCTGCAGTCAGAATGCGTaGAGCTGCGGCGGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTCSQNA*SCGGAL
Trigger: CAGAGCACCGCCGCAGCTTCACGCATTCTGACTGCA...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCCAGGGGCTTCTTGCTaGTGGACCTGGACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAPGASC*WTWTGW
Trigger: CCACCCAGTCCAGGTCCATCAGCAAGAAGCCCCTGG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGTGCAGGTACCCCGCTaGCCACGCCGTGTTTGTCGC +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKVQVPR*PRRVCR
Trigger: GCGACAAACACGGCGTGGTCAGCGGGGTACCTGCAC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGGTAGAGCGACTTGCTaGGCATGTACCCGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKGRATC*ACTRRR
Trigger: CCGGCGGCGGGTACATGCTCAGCAAGTCGCTCTACC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGGCTGGCACGGCCCCATaGAGGGCCGAGACCACCGGC +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMAGTAP*RAETTG
Trigger: GCCGGTGGTCTCGGCCCTTCATGGGGCCGTGCCAGC...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGAGGGGATGAGTCCCTaGCCCCTGGACAGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAEGMSP*PLDRVR
Trigger: CCTGACTCTGTCCAGGGGTCAGGGACTCATCCCCTC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCGGACCTGGGCAGGAATaGCATGGGGCCAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTGPGQE*HGARFL
Trigger: AAGGAACCTGGCCCCATGTCATTCCTGCCCAGGTCC...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCCCATGTTCTTGGCCGTaGGCAGCAGGCGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTPCSWP*AAGAGC
Trigger: ACATCCTGCGCCTGCTGCGCACGGCCAAGAACATGG...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCCCCTTGAGGCTGCCCTaGTCACTGTGGGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGPLRLP*SLWADQ
Trigger: TTGGTCAGCCCACAGTGAGCAGGGCAGCCTCAAGGG...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCGTCCCTCCTCTCCCCTaGGGCCTAACTCCCAAATCC +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTVPPLP*GLTPKS
Trigger: GGATTTGGGAGTTAGGCCGCAGGGGAGAGGAGGGAC...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCAGGGCCAACCCCAAATaGCCACAGCCTCGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTRANPK*PQPRLG
Trigger: CCCTAAGCGAGGCTGTGGGCATTTGGGGTTGGCCCT...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCGGGGTGGCCGGTGGCTaGGAATGGAGGGTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTGVAGG*EWRVFL
Trigger: AAGGAAAACCCTCCATTCCCAGCCACCGGCCACCCC...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCGCCCGTCCCGTGCTTaGTGTGAGACCTGTTGGTAC +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCARPSRA*CETCWY
Trigger: GTACCAACAGGTCTCACATCAAGCACGGGACGGGCG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTAGTGGTGGAGGCGTTTaGCGTCACCGCCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLSGGGV*RHRHWG
Trigger: GCCCCAGTGGCGGTGACGTCAAACGCCTCCACCACT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCGGTGCTCTCGCCAGCTaGCATCTCAAACATGTGGGC +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTGALAS*HLKHVG
Trigger: GCCCACATGTTTGAGATGTCAGCTGGCGAGAGCACC...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGGGTTGTTGTGGTGGTaGTGTCCGGCAGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAGLLWW*CPAVGT
Trigger: AGTGCCCACTGCCGGACATCACCACCACAACAACCC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCCACCGGCTTGTTGGTaGCAAGGGCCCGGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYPPACW*QGPGSP
Trigger: CGGACTTCCGGGCCCTTGTCACCAACAAGCCGGTGG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCCAGCCCTGGAGGGAGTaGCTTGAAGAGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGQPWRE*LEETWQ
Trigger: CTGCCATGTCTCTTCAAGTCACTCCCTCCAGGGCTG...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCCCTTGGGCAACTCCTaGTGGCCACGGAAGACCGGG +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYPLGNS*WPRKTG
Trigger: CCCGGTCTTCCGTGGCCATCAGGAGTTGCCCAAGGG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATGAGCTGAGGCAAGCCTaGGTCGTCGGTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYELRQA*VVGAPW
Trigger: CCAGGGAGCACCGACGACTCAGGCTTGCCTCAGCTC...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCTCGGTCAGGTCTACGTaGTCCCAGTGGGGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTSVRST*SQWGEF
Trigger: GAACTCACCCCACTGGGAGCACGTAGACCTGACCGA...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATGCTTGGAGGGACAGCTaGGGCAGAAGTTGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYAWRDS*GRSCPR
Trigger: CCGGGGGCAACTTCTGCCGCAGCTGTCCCTCCAAGC...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGGATGCACGCCTGCCTaGCCGAGTTCTGACCCGTCA +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLGCTPA*PSSDPS
Trigger: TGACGGGTCAGAACTCGGGCAGGCAGGCGTGCATCC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGAGAGGGGTGGCCGGTaGCTGGGAATGGAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAERGGR*LGMEGF
Trigger: AAAACCCTCCATTCCCAGCCACCGGCCACCCCTCTC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCGACCCGTCACCGTCGTaGAGTAGTTGTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTDPSPS*SSCAAW
Trigger: CCAAGCTGCACAACTACTCCACGACGGTGACGGGTC...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGTCATGCCCTGGGGCCTaGAGGTGGAGATGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPESCPGA*RWRCPS
Trigger: AGAAGGGCATCTCCACCTCCAGGCCCCAGGGCATGA...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCCCCAGGGAGGAGTGTaGAGTCTGGGCCTCGCAGAG +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYPQGGV*SLGLAE
Trigger: CTCTGCGAGGCCCAGACTCCACACTCCTCCCTGGGG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp GGCAGTAATGAGGACAAGGCAAATAAAGAGCCGCTATaGGCACCATTGCTCACATACCCACCCTCCCACGTC +
Preference number: 4 (lower is better)
Translates to: GSNEDKANKEPL*APLLTYPPSHV
Trigger: GACGTGGGAGGGTGGGTATGTGAGCAATGGTGCCAATAGCGGCTCTTTATTTGCCTTGTCCTCATTACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp CAAATCCTGACAGTGTCCTACAAGGCCCTACCTGACTaGCGTTATTGCCCCCTCTCTGACCTCACCTCTCAT +
Preference number: 4 (lower is better)
Translates to: QILTVSYKALPD*RYCPLSDLTSH
Trigger: ATGAGAGGTGAGGTCAGAGAGGGGGCAATAACGCAAGTCAGGTAGGGCCTTGTAGGACACTGTCAGGATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATCTCGTGGGCATCCTTaGTGGCCACCTCGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKSRGHP*WPPRRK
Trigger: CTTCCGACGAGGTGGCCATCAAGGATGCCCACGAGA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGCCCACACTGACACCATaGTCTTGGAGGTGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEPTLTP*SWRWSP
Trigger: AGGGGACCACCTCCAAGATCATGGTGTCAGTGTGGG...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCACCTGGACTGGGTGGTaGAGGGTGGGTTGTCACAGT +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSTWTGW*RVGCHS
Trigger: ACTGTGACAACCCACCCTTCACCACCCAGTCCAGGT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCGGTGACGGTGTGGGTTaGGATGTCAGAGACATCGGA +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTGDGVG*DVRDIG
Trigger: TCCGATGTCTCTGACATCTCAACCCACACCGTCACC...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGGCCCTTCCTTGTCCCTaGAGTAGCGCTTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEALPCP*SSACGQ
Trigger: CTGACCACAAGCGCTACTTCAGGGACAAGGAAGGGC...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCGTGCTCCCAGTGGGGTaGGTTCTCCTTTGTTCGGAA +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTVLPVG*VLLCSE
Trigger: TTCCGAACAAAGGAGAACTCACCCCACTGGGAGCAC...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCTCCGGCAGTGGGCACTaGGGACTTGTTGTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGSGSGH*GLVVGK
Trigger: TTTGCCAACAACAAGTCCTCAGTGCCCACTGCCGGA...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGCCCCGTCACCCTCCGTaGCATGCGCATCACGCGACC +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMPRHPP*HAHHAT
Trigger: GGTCGCGTGATGCGCATGTCACGGAGGGTGACGGGG...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCCCAAGGCCAGATTATaGACACCTGGCTCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSPKARL*TPGSRP
Trigger: TGGCCTCGAGCCAGGTGTTCATAATCTGGCCTTGGG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTTGTGGCCCCTTCCCCTaGTGCTGTTCTCCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCACGPFP*CCSPVR
Trigger: TCTGACAGGAGAACAGCATCAGGGGAAGGGGCCACA...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTTTCCCCTCTGCCATGTaGCTTTGGGAGGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLFPSAM*LWEGCS
Trigger: GCTGCACCCCTCCCAAAGTCACATGGCAGAGGGGAA...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGAGAACGAGCTCTGCTaGCTGACACGGCCAGGACGG +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLENELC*LTRPGR
Trigger: CCGTCCTGGCCGTGTCAGGCAGCAGAGCTCGTTCTC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCGATTTGCAGTCAGAATaGGTGAAGCTGCGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTDLQSE*VKLRRC
Trigger: GCACCGCCGCAGCTTCACGCATTCTGACTGCAAATC...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCGCCTCTTGGCGGCATTaGCCTCGATGTTCCCATAGG +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSASWRH*PRCSHR
Trigger: CCTATGGGAACATCGAGGGCAATGCCGCCAAGAGGC...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATCTCGTCAAACTCCCTaGGGGACTTGGCCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKSRQTP*GTWPRQ
Trigger: CTGCCTCGGCCAAGTCCCGCAGGGAGTTTGACGAGA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGGCTGGTCCAGTTCCTaGAGGGAGTTGTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAGWSSS*RELSSL
Trigger: CAGTGAGGACAACTCCCTGCAGGAACTGGACCAGCC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATCACCCTCCGTGACATaGGCATCACGCGACCCACAG +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKSPSVT*ASRDPQ
Trigger: CTGTGGGTCGCGTGATGCGCATGTCACGGAGGGTGA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCAGGGAGCATCAGTTCTaGTGGTACCCTCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTREHQF*WYPHPW
Trigger: CCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTCTGCCATCAAGTCCCTaGCCCGGGCACTTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLLPSSP*PGHLQH
Trigger: ATGCTGCAAGTGCCCGGGGCAGGGACTTGATGGCAG...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCGGCTCCGTCCCTCGGTaGAGCATGGTCATTCCCAAA +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSGSVPR*SMVIPK
Trigger: TTTGGGAATGACCATGCTCCACCGAGGGACGGAGCC...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCCGAGGATCTGGGCGATaGCTTCCTGGTCTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGRGSGR*LPGLCH
Trigger: ATGACACAGACCAGGAAGCCATCGCCCAGATCCTCG...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCCTGCTCTTCAGTCTCTaGACACATTCGGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTLLFSL*THSGPH
Trigger: GTGTGGCCCCGAATGTGTCCAGAGACTGAAGAGCAG...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGCCATGGAGCAAGCACTaGTCGTCCCCAAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEPWSKH*SSPKVG
Trigger: CCCCACTTTTGGGGACGACCAGTGCTTGCTCCATGG...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCTTCTGGAAACGGGCTaGCACGGCCCCATGAAGGGC +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVLLETG*HGPMKG
Trigger: GCCCTTCATGGGGCCGTGCCAGCCCGTTTCCAGAAG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCCCCTCAATCACAACATaGCTGTGGCCAGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGPSITT*LWPVQG
Trigger: TCCCTGCACTGGCCACAGCCATGTTGTGATTGAGGG...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTCTCCTCCTCCCTCATTaGCCTCCCGGCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLLLLPH*PPGSSS
Trigger: TGAGGAAGAGCCGGGAGGCCAATGAGGGAGGAGGAG...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGATGACTCCCGTCGGATaGAGTCCAGGGCGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGMTPVG*SPGRSA
Trigger: CGCAGAGCGCCCTGGACTTCATCCGACGGGAGTCAT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTCCACCGTGGGCTGCCTaGAGAAGTAGGATTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLPPWAA*RSRICC
Trigger: GCAGCAAATCCTACTTCTTCAGGCAGCCCACGGTGG...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGAGATGGGGCAGGGAGTaGGTCAGCGCCCAGGTCCTA +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGRWGRE*VSAQVL
Trigger: TAGGACCTGGGCGCTGACTCACTCCCTGCCCCATCT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGGTGTGTTTGCCAGGCTaGCTTCTGAGGGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEVCLPG*LLRVEM
Trigger: CATCTCCACCCTCAGAAGTCAGCCTGGCAAACACAC...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAACTGAAACTAGCCTCCTaGACCAGGCTCCGGGGATCA +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKLKLAS*TRLRGS
Trigger: TGATCCCCGGAGCCTGGTTCAGGAGGCTAGTTTCAG...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTCAGGGCTGCCATACATaGGCTCACCCAGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLQGCHT*AHPGSL
Trigger: CAAGGAGCCTGGGTGAGCTCATGTATGGCAGCCCTG...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGGTGGTAGAATCACTTaGGCCTGGGAGGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAGGRIT*AWEVKA
Trigger: AGCCTTGACCTCCCAGGCTCAAGTGATTCTACCACC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCGCTCCAGGTAACCTTTaGTGGGGAGGGCAGATAGAC +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSAPGNL*WGGQID
Trigger: GTCTATCTGCCCTCCCCATCAAAGGTTACCTGGAGC...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAGAGCGCCTCCGCGGTTaGAGTCTGCGGAGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLERLRG*SLRRGV
Trigger: CACCCCTCTCCGCAGACTGCAACCGCGGAGGCGCTC...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGTTCTTCTCCCAAGGTaGAGGTACCCCGCTGACCAC +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKVLLPR*RYPADH
Trigger: GTGGTCAGCGGGGTACCTGCACCTTGGGAGAAGAAC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGGTTGCCTGCTTTCTTaGAAGCCTCACACCGGATGC +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAGCLLS*KPHTGC
Trigger: GCATCCGGTGTGAGGCTTGCAAGAAAGCAGGCAACC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTTGGAGGGTCCCTCTCTaGCCCCGTCTCCCATTTCCA +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLWRVPL*PRLPFP
Trigger: TGGAAATGGGAGACGGGGGCAGAGAGGGACCCTCCA...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATCTTCCTCCTGGAGGTaGCTCATGCCCTCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKSSSWR*LMPSVL
Trigger: GAGGACAGAGGGCATGAGGCACCTCCAGGAGGAAGA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCGCTATTGGCACCATTaGTCACATACCCACCCTCCC +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSRYWHH*SHTHPP
Trigger: GGGAGGGTGGGTATGTGAGCAATGGTGCCAATAGCG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCTTGCACCTTCCTCATaGCCTGGGGCCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGLAPSS*PGAWRW
Trigger: CCACCTCCAGGCCCCAGGGCATGAGGAAGGTGCAAG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTAGCCTGAGTCGTCGGTaGTCCCTGGAGAGGACATCA +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLSLSRR*SLERTS
Trigger: TGATGTCCTCTCCAGGGAGCACCGACGACTCAGGCT...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGGCCCATCGATGGAGCTaGCACTGCCAATACTATGGG +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEAHRWS*HCQYYG
Trigger: CCCATAGTATTGGCAGTGCCAGCTCCATCGATGGGC...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCGTAGAGCCCATCGATaGAGCTGGCACTGCCAATAC +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSRRAHR*SWHCQY
Trigger: GTATTGGCAGTGCCAGCTCCATCGATGGGCTCTACG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGCCTCCCACTCCACGTTaGTCAGGTTCTTCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEPPTPR*SGSSPK
Trigger: CTTGGGAGAAGAACCTGACCAACGTGGAGTGGGAGG...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATAGACCTGGGGCTCTCTaGATGCCACCCTGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYRPGAL*MPPCVG
Trigger: CCCTACACAGGGTGGCATCCAGAGAGCCCCAGGTCT...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATGCTTCCACACAGACCTaGGGCTCTCTGGATGCCACC +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYASTQT*GSLDAT
Trigger: GGTGGCATCCAGAGAGCCCCAGGTCTGTGTGGAAGC...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp CAGCATCAGAGGAGGCCGCTGGGAGATTTCTCAGGATaGAGCTTCCTGAAACCTTTCAGTCACGCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: QHQRRPLGDFSG*SFLKPFSHAKN
Trigger: ATTCTTGGCGTGACTGAAAGGTTTCAGGAAGCTCAATCCTGAGAAATCTCCCAGCGGCCTCCTCTGATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp ATCATGACACCCCTGCACACGTTCCTGAAGGCTCTTTaGCCATGTAGCACTCTGGAAGAAATCCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: IMTPLHTFLKAL*PCSTLEEILCP
Trigger: GGGACAGAGGATTTCTTCCAGAGTGCTACATGGCAAAAGAGCCTTCAGGAACGTGTGCAGGGGTGTCATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp CCTTTCCTCTTGCTCTTACAGAAACCTGGCTCCTCTTaGAGGACCCTGAATCACTCCCAGGTGGTGAGCATT +
Preference number: 4 (lower is better)
Translates to: PFLLLLQKPGSS*RTLNHSQVVSI
Trigger: AATGCTCACCACCTGGGAGTGATTCAGGGTCCTCAAAGAGGAGCCAGGTTTCTGTAAGAGCAAGAGGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAAAGTGCCCACGAGGATaGCAGCAATGCCAATGCTGG +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKKCPRG*QQCQCW
Trigger: CCAGCATTGGCATTGCTGTCATCCTCGTGGGCACTT...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCGAGTCTGTGCTGAAATaGAATCGAGGATCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGESVLK*NRGSGR
Trigger: TCGCCCAGATCCTCGATTTCATTTCAGCACAGACTC...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCGCCAGTCAGCCCTACTaGGTTGGCCACTTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSASQPY*VGHFKD
Trigger: ATCTTTGAAGTGGCCAACTCAGTAGGGCTGACTGGC...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGGGAGTTGTCCTCACTaGTGTCATACAGGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAGSCPH*CHTGCL
Trigger: CAGGCAACCTGTATGACATCAGTGAGGACAACTCCC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCAGTCAAGGGCGGGATaGGGAAGGGTCACGAGTGAG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGQSRAG*GRVTSE
Trigger: CTCACTCGTGACCCTTCCTCATCCCGCCCTTGACTG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGTTGCCAGCGGAGACTaGAAGAGCTCCCTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLVASGD*KSSLGS
Trigger: AGAACCAAGGGAGCTCTTTCAGTCTCCGCTGGCAAC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCTCCAGCCCAACACCCTaGATACTCACAAGAGAACAC +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGSSPTP*ILTREH
Trigger: GTGTTCTCTTGTGAGTATTCAGGGTGTTGGGCTGGA...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCAGTGACATGTGCAGGTaGCCAGCACTCTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSSDMCR*PALCRE
Trigger: TTCTCTGCAGAGTGCTGGTCACCTGCACATGTCACT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTTGGGGATGCAATGAATaGCAAGGGGATGGGATGCAG +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAWGCNE*QGDGMQ
Trigger: CTGCATCCCATCCCCTTGTCATTCATTGCATCCCCA...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTTTGGGTGCTGTAATCTaGAGGACCTGGGCAGGAATG +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCALGAVI*RTWAGM
Trigger: CATTCCTGCCCAGGTCCTTCAGATTACAGCACCCAA...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTAACACTTGCCTCCTATaGACCCAGGGCCAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLNTCLL*TQGQGE
Trigger: CTCCCCTTGGCCCTGGGTTCATAGGAGGCAAGTGTT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCGCCAAGCATTTGGTTTaGCAGCAGGGCCTTTGCAAT +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGAKHLV*QQGLCN
Trigger: ATTGCAAAGGCCCTGCTGTCAAACCAAATGCTTGGC...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGTCCGGAACAGTTGGCTaGTGGGGACACAACCGGGTG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGSGTVG*WGHNRV
Trigger: CACCCGGTTGTGTCCCCATCAGCCAACTGTTCCGGA...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCAGACTCTCTAGGGGATaGGACTCAGGCATCAGCATT +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGRLSRG*DSGISI
Trigger: AATGCTGATGCCTGAGTCTCATCCCCTAGAGAGTCT...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTATCCGCGGTTGCAGTCTaGGGAGAGGGGTGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVSAVAV*GEGWPV
Trigger: CACCGGCCACCCCTCTCCGCAGACTGCAACCGCGGA...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCCTCCAGGGTCACAATaGTCAGATGGTCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAPPGSQ*SDGHPP
Trigger: AGGAGGATGACCATCTGAGCATTGTGACCCTGGAGG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGCCATCTCCAAAGAGCTaGAGGATAGCAAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEPSPKS*RIARST
Trigger: GGTGGACCTTGCTATCCTGCAGCTCTTTGGAGATGG...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACTTTCAGGCTTACGCTaGGCGGGGCCAGGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLLSGLR*AGPGRL
Trigger: AAGCCGCCCTGGCCCCGCGCAGCGTAAGCCTGAAAG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCTGTTGTTGGCAAAGGTaGTCTCGCCAGCTGACATCT +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTCCWQR*SRQLTS
Trigger: AGATGTCAGCTGGCGAGAGCACCTTTGCCAACAACA...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTTCGTACCTCCAGAGCTaGACTCATGGAGTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLSYLQS*THGVQL
Trigger: GAGCTGCACTCCATGAGTGCAGCTCTGGAGGTACGA...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCGCTCTCAGTGCTCTCTaGTCCCTTCCTCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSALSAL*SLPLLL
Trigger: CAAGAGAAGAGGAAGGGAGCAGAGAGCACTGAGAGC...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGCAAGGGGGAACCATGTaGCTCACATGTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEQGGTM*LTCQLL
Trigger: CAGAAGCTGACATGTGAGGCACATGGTTCCCCCTTG...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGCCCAGTGTGGTGGTATaGACCAGTAGTACCCAGCTA +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEPSVVV*TSSTQL
Trigger: TAGCTGGGTACTACTGGTGCATACCACCACACTGGG...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGGGGACACAACCGGGTaGTCCCTCAGCCTTTCATTA +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLGDTTG*SLSLSL
Trigger: TAATGAAAGGCTGAGGGAGCACCCGGTTGTGTCCCC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATTCCCTCGGTGGAGCATaGTCATTCCCAAAGCGTCCC +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYSLGGA*SFPKRP
Trigger: GGGACGCTTTGGGAATGACCATGCTCCACCGAGGGA...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCGGTGATGATGCTCTTTaGGTCGGTCTCATTCATGGC +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTGDDAL*VGLIHG
Trigger: GCCATGAATGAGACCGACCCAAAGAGCATCATCACC...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGCCCCTGCCACCAGACTaGGCACGATCCACGTGTAGC +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMPLPPD*ARSTCS
Trigger: GCTACACGTGGATCGTGCCCAGTCTGGTGGCAGGGG...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTTTCCATCTCTCACTCTaGCGGGGAGGCCATAGTCCC +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLFHLSL*RGGHSP
Trigger: GGGACTATGGCCTCCCCGCCAGAGTGAGAGATGGAA...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATGGAGGTGGTCCCCTTTaGGTTCTGCACAGGTACGGA +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYGGGPL*VLHRYG
Trigger: TCCGTACCTGTGCAGAACCCAAAGGGGACCACCTCC...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTATAGCAAGGTCCACCTaGCGCTTCCACCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAIARST*RFHPES
Trigger: AGATTCTGGGTGGAAGCGCCAGGTGGACCTTGCTAT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGAGTTCATTACAGACTaGCGCTCCTCGATCGCCACC +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKEFITD*RSSIAT
Trigger: GGTGGCGATCGAGGAGCGCCAGTCTGTAATGAACTC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGCTGCTTACGCCTCTTaGCGGCATTGCCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLAAYAS*RHCPRC
Trigger: ACATCGAGGGCAATGCCGCCAAGAGGCGTAAGCAGC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCTCTACGTGCTCCCAGTaGGGTGAGTTCTCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTSTCSQ*GEFSFV
Trigger: AACAAAGGAGAACTCACCCCACTGGGAGCACGTAGA...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTCTGTGTAGGGGAGGATaGCAGGACAGTGGAACTGAC +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLLCRGG*QDSGTD
Trigger: GTCAGTTCCACTGTCCTGCCATCCTCCCCTACACAG...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCATACAGTGGTCCTGTTaGACCACCACCTGGGGTCTA +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSIQWSC*TTTWGL
Trigger: TAGACCCCAGGTGGTGGTCCAACAGGACCACTGTAT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGGGGCCAGGTTCCTTGTaGATATCAGGACCTCACACA +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEGPGSL*ISGPHT
Trigger: TGTGTGAGGTCCTGATATCCACAAGGAACCTGGCCC...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATGGGCAGGAATGACATaGGGCCAGGTTCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKWAGMT*GQVPCG
Trigger: TCCACAAGGAACCTGGCCCCATGTCATTCCTGCCCA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCCTCCATTGGCCGCTATaGTACAGCTCAGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGLHWPL*YSSEKL
Trigger: CAGCTTTTCTGAGCTGTACCATAGCGGCCAATGGAG...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCTGGCTCCTGTCACGTaGAGGAAAAGAGATTTCCCC +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCALAPVT*RKRDFP
Trigger: GGGGAAATCTCTTTTCCTCCACGTGACAGGAGCCAG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCATCAGCCCAGTGTGGTaGTATGCACCAGTAGTACCC +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSISPVW*YAPVVP
Trigger: GGGTACTACTGGTGCATACCACCACACTGGGCTGAT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp CTCCCGGCTCTTCCTCAAGTTTGCCAAGCATTTGGTTaGACAGCAGGGCCTTTGCAATTGCTTTCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LPALPQVCQAFG*TAGPLQLLSLC
Trigger: GCAAAGAGAAAGCAATTGCAAAGGCCCTGCTGTCAAACCAAATGCTTGGCAAACTTGAGGAAGAGCCGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp GAAAACGGCTGGCAGGATATGACCATGCTGAAGGGTTaGCCTTTATTAGTGGACAGAGAGGCTGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: ENGWQDMTMLKG*PLLVDREAEPA
Trigger: TGCTGGTTCAGCCTCTCTGTCCACTAATAAAGGCAAACCCTTCAGCATGGTCATATCCTGCCAGCCGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp CACTGCCCCATCCCTTCTCTGATCTCCACTGTAACATaGCCTCTAGCTCCCTTGAAATGTTTCCACAAGCGT +
Preference number: 4 (lower is better)
Translates to: HCPIPSLISTVT*PLAPLKCFHKR
Trigger: ACGCTTGTGGAAACATTTCAAGGGAGCTAGAGGCAATGTTACAGTGGAGATCAGAGAAGGGATGGGGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCACTACTGGATGGTGGTaGTCAAGAATCACCCTTGAC +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGTTGWW*SRITLD
Trigger: GTCAAGGGTGATTCTTGATCACCACCATCCAGTAGT...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATTTTGGGCTCAGGGATaGAGCTGTGCTCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKFWAQG*SCAQTA
Trigger: TGCTGTCTGAGCACAGCTTCATCCCTGAGCCCAAAA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGAAAGACAGCCACGGCTaGGACGATGAGCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVKDSHG*DDEQHH
Trigger: GTGATGCTGCTCATCGTCTCAGCCGTGGCTGTCTTT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTGTAGATACCTCTGCTaGTGGAGAAGACCATGCCAG +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSCRYLC*WRRPCQ
Trigger: CTGGCATGGTCTTCTCCATCAGCAGAGGTATCTACA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGATGTCATAGACGGATaGCTCCCGTCGGATGAAGTC +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKDVIDG*LPSDEV
Trigger: GACTTCATCCGACGGGAGTCATCCGTCTATGACATC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATAGGGGCTCCCATCCATaGATCGGCCCTTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYRGSHP*IGPCLS
Trigger: TGAAAGACAAGGGCCGATTCATGGATGGGAGCCCCT...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCCTTCCAGAGGAGGATaGGCACCTTTCTGGTTTATG +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSPSRGG*APFWFM
Trigger: CATAAACCAGAAAGGTGCTCATCCTCCTCTGGAAGG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCCCTGGCCAAAGTGCATaGACATTTCTCACAAACCAG +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGPGQSA*TFLTNQ
Trigger: CTGGTTTGTGAGAAATGTTCATGCACTTTGGCCAGG...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGCAGAGGGACAGAGACTaGCACTGGCTAGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEQRDRD*HWLERM
Trigger: CATTCTTTCTAGCCAGTGTCAGTCTCTGTCCCTCTG...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCCAGAGCAGCTGAAGTaGAAGGACAGTACGAGCTCC +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVPEQLK*KDSTSS
Trigger: GGAGCTCGTACTGTCCTTTCACTTCAGCTGCTCTGG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCATGAACGTCCTTCATaGGGATGGCTGTCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAHERPS*GWLSSY
Trigger: GTAGGAAGACAGCCATCCTCATGAAGGACGTTCATG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTACCTTGAGGGATCAATaGTCCACAAGCCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCATLRDQ*STSQVE
Trigger: CTCTACCTGGCTTGTGGATCATTGATCCCTCAAGGT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTTTATTGCCCCCTCTCTaGCCTCACCTCTCATACTCT +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCALLPPL*PHLSYS
Trigger: AGAGTATGAGAGGTGAGGTCAGAGAGGGGGCAATAA...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAACCCTCTCCTGATCCTTaGAAACGCTCTCTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKPSPDP*KRSLKA
Trigger: AGCCTTGAGAGAGCGTTTTCAAGGATCAGGAGAGGG...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAGGGTGGGAGCCAGTCTaGAGGAGGGGAGATCTGAGG +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLGWEPV*RRGDLR
Trigger: CCTCAGATCTCCCCTCCTTCAGACTGGCTCCCACCC...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTATGGGCCTCGCAGAGCTaGGGCAAGCCTGAGTCGTCG +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVWASQS*GKPESS
Trigger: CGACGACTCAGGCTTGCCTCAGCTCTGCGAGGCCCA...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTATGGTGAGAGGAGAGTaGCAACAAACAGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAMVRGE*QQTAAT
Trigger: TGTGGCAGCTGTTTGTTGTCACTCTCCTCTCACCAT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGTCTGAGAACGAGCTCTaGTGCCTGACACGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGSENEL*CLTRPG
Trigger: TCCTGGCCGTGTCAGGCAGCAGAGCTCGTTCTCAGA...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGAATATTTCTCTCTGTaGTGCCGTTGGGCACGGTCC +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLEYFSL*CRWARS
Trigger: GGACCGTGCCCAACGGCAGCACAGAGAGAAATATTC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGCCTTCATCTCTGCCTaGCATATAGTTCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAAFISA*HIVQHC
Trigger: GCAGTGCTGAACTATATGGCAGGCAGAGATGAAGGC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCTGTGTTGTTCATGGTTaGGGTGGGGGAGTTCATTAC +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTCVVHG*GGGVHY
Trigger: GTAATGAACTCCCCCACCGCAACCATGAACAACACA...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGAAGTCCAGGGCGCTCTaGGGTGAGCCATTCACACCA +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGKSRAL*GEPFTP
Trigger: TGGTGTGAATGGCTCACCGCAGAGCGCCCTGGACTT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCGTCATACAGGTTGCCTaGTTTCTTGCAAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGVIQVA*FLASLT
Trigger: TGTGAGGCTTGCAAGAAAGCAGGCAACCTGTATGAC...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGGCGGCTTCTTCCTTCTaGAGGTCCACGAAGGTGTCG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGAASSF*RSTKVS
Trigger: CGACACCTTCGTGGACCTGCAGAAGGAAGAAGCCGC...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCCATGGCTGTGGCCAGTaGAGGGAAATACATATGAAG +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGHGCGQ*REIHMK
Trigger: CTTCATATGTATTTCCCTGCACTGGCCACAGCCATG...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAACAAGGGCTCCTTGGGTaGTGTAATCTGAAGGACCTG +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKQGLLG*CNLKDL
Trigger: CAGGTCCTTCAGATTACAGCACCCAAGGAGCCCTTG...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCGTTTTGAGGATGGGCTaGTCAGAGTCAACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGVLRMG*SESTQD
Trigger: ATCCTGAGTTGACTCTGAGCAGCCCATCCTCAAAAC...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGATCCCCAGATACCCATaGACATCTCCCATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEIPRYP*TSPISA
Trigger: AGCTGAGATGGGAGATGTGCATGGGTATCTGGGGAT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCAGAGTTCCATGTGCTaGCATCAAGTCCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGQSSMC*HQVPAP
Trigger: CGGGGCAGGGACTTGATGGCAGCACATGGAACTCTG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGTGTCAGAAACAACGTaGAGTGTCTCTGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLVSETT*SVSGGR
Trigger: TCTGCCCCCAGAGACACTGCACGTTGTTTCTGACAC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTTACTGATAGTCCCTTaGAGTGGACTTCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSLLIVP*SGLQGG
Trigger: GCCACCCTGAAGTCCACTGCAAGGGACTATCAGTAA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCACTCGTCGACTCCCTTaGTTTGTAGAAGCCAAACCT +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGTRRLP*FVEAKP
Trigger: AGGTTTGGCTTCTACAAACCAAGGGAGTCGACGAGT...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGATGAAATCGAGGATCTaGGCGATGGCTTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEMKSRI*AMASWS
Trigger: AGACCAGGAAGCCATCGCCCAGATCCTCGATTTCAT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGCAGGCGCAGGATGTTaGAGTGTGTGTTGTTCATGG +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLAGAGC*SVCCSW
Trigger: CCATGAACAACACACACTCCAACATCCTGCGCCTGC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTCTGGGTGGTGAAGGGTaGGTTGTCACAGTCGTAGAG +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLLGGEG*VVTVVE
Trigger: CTCTACGACTGTGACAACCCACCCTTCACCACCCAG...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATGGTGATGTCCGGCAGTaGGCACTGAGGACTTGTTGT +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYGDVRQ*ALRTCC
Trigger: ACAACAAGTCCTCAGTGCCCACTGCCGGACATCACC...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTATACAGATGTCCTTCTaGAAACGGGCTGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLIQMSF*KRAGTA
Trigger: GGCCGTGCCAGCCCGTTTCCAGAAGGACATCTGTAT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGAAAAGGAGGAGAGATaGTGCTGGTCACCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLEKEER*CWSPGL
Trigger: CAACCCTGGTGACCAGCACCATCTCTCCTCCTTTTC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCCATGGCATCATCTCATaGGAACAGGAATGGCTGACA +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTHGIIS*EQEWLT
Trigger: TGTCAGCCATTCCTGTTCCCATGAGATGATGCCATG...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGAGCATCAGTTCTGCTaGTACCCTCATCCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKEHQFC*YPHPWS
Trigger: ACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGATCAAGGAGGAGGGTTaGGGACAGCAGTCAAGGGCG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGIKEEG*GQQSRA
Trigger: CGCCCTTGACTGCTGTCCCCAACCCTCCTCCTTGAT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTTTTCTGAGCCATCAATaGCAGCACAGCCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAFLSHQ*QHSLSF
Trigger: GAAGGAGAGGCTGTGCTGCCATTGATGGCTCAGAAA...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGGCACCTAGAACAGCCTaGCATGGGTTTCCACTCAAT +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEAPRTA*HGFPLN
Trigger: ATTGAGTGGAAACCCATGCCAGGCTGTTCTAGGTGC...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp AGGTTCCTTGTGGATATCAGGACCTCACACATAAGGTaGCATTCAGGTTCCTCACTCATCTCCGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: RFLVDIRTSHIR*HSGSSLISALV
Trigger: GACCAAAGCGGAGATGAGTGAGGAACCTGAATGCAACCTTATGTGTGAGGTCCTGATATCCACAAGGAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp ATGTACCATAGGCTAAGTGTGGTGGAGCCTAATGGGTaGCTGGTTATCCTAGAAACTCCACCATTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: MYHRLSVVEPNG*LVILETPPFPK
Trigger: CTTGGGGAATGGTGGAGTTTCTAGGATAACCAGCAACCCATTAGGCTCCACCACACTTAGCCTATGGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp TGGTTTGACAGCAGGGCCTTTGCAATTGCTTTCTCTTaGCCTTTGCATAGAAAGCCCCAAGTCTCACTCCCT +
Preference number: 4 (lower is better)
Translates to: WFDSRAFAIAFS*PLHRKPQVSLP
Trigger: AGGGAGTGAGACTTGGGGCTTTCTATGCAAAGGCAAAGAGAAAGCAATTGCAAAGGCCCTGCTGTCAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATGTAGGCCCTCTTCATaGCCACCTCTCCAATCATAC +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKCRPSS*PPLQSY
Trigger: GTATGATTGGAGAGGTGGTCATGAAGAGGGCCTACA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTTGTAGCGGTCGCTCTTaGAGGAGAATTTGCCGTACA +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLCSGRS*RRICRT
Trigger: TGTACGGCAAATTCTCCTTCAAGAGCGACCGCTACA...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTCGATGTTCCCATAGGTaGCGGTGTGGGTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLRCSHR*RCGLRC
Trigger: ACATCTCAACCCACACCGTCACCTATGGGAACATCG...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGGTCCCGTGCTTGATGTaGGACCTGTTGGTACAGGGC +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMVPCLM*DLLVQG
Trigger: GCCCTGTACCAACAGGTCTCACATCAAGCACGGGAC...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGAATTAGTCGGGCTCTaGGGGTACTTAGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVELVGL*GYLVVE
Trigger: CTCCACCACTAAGTACCCTCAGAGCCCGACTAATTC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCAATATTAGGTGCTCCTaGGGGTATCTGCGGAATCTC +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSNIRCS*GYLRNL
Trigger: GAGATTCCGCAGATACCCTCAGGAGCACCTAATATT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTCACAGGGCCACTGTGTaGCTGAATCAATGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLHRATV*LNQCGW
Trigger: CCAACCACATTGATTCAGTCACACAGTGGCCCTGTG...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTATTTTTCTTGCTCCTaGCCCTGGGAGAGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSYFSCS*PWEREN
Trigger: GTTCTCTCTCTCCCAGGGTCAGGAGCAAGAAAAATA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGAATGCGCTGATCACTaGAGGTGTGCAAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKECADH*RCARVS
Trigger: TGAGACTCTTGCACACCTTCAGTGATCAGCGCATTC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGTCCACTGCTAGATGCTaGAAACCTACAGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVSTARC*KPTVGA
Trigger: TGCCCCCACTGTAGGTTTTCAGCATCTAGCAGTGGA...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGACCTTCGGAGTATCATaGCACCCCTGCACACGTTCC +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGTFGVS*HPCTRS
Trigger: GGAACGTGTGCAGGGGTGTCATGATACTCCGAAGGT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCTGCTCACTGTGGGCTaGCCAAAACTACTGACACCT +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYLLTVG*PKLLTP
Trigger: AGGTGTCAGTAGTTTTGGTCAGCCCACAGTGAGCAG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAACAGCTGTTGGCCCTGTaGCCTGTTTTTCAGGATCAT +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKQLLAL*PVFQDH
Trigger: ATGATCCTGAAAAACAGGTCACAGGGCCAACAGCTG...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGCCCCCACCAGTCCACTaGAACAGCTCTCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMPPPVH*NSSLPG
Trigger: ACCTGGAAGAGAGCTGTTTCAGTGGACTGGTGGGGG...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCCCTCTATGTTTGTATTaGATCCCATGCCCTCTCACT +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGPLCLY*IPCPLT
Trigger: AGTGAGAGGGCATGGGATTCAATACAAACATAGAGG...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGAGTGGACAGAGAGGCTaGACCAGCAGCAGCAGTAGT +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGSGQRG*TSSSSS
Trigger: ACTACTGCTGCTGCTGGTTCAGCCTCTCTGTCCACT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGAAGGAGGGGAGATCTaGGGCAGGGTAAATGGAAGT +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVEGGEI*GRVNGS
Trigger: ACTTCCATTTACCCTGCCTCAGATCTCCCCTCCTTC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGGGAGGGGTGCAGCTGTaGATTTGCAACGCAACCCCA +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMGGVQL*ICNATP
Trigger: TGGGGTTGCGTTGCAAATTCACAGCTGCACCCCTCC...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCAAGGCAAAAGGATATaGATTCGGACGCCAGCACTA +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSQGKRI*IRTPAL
Trigger: TAGTGCTGGCGTCCGAATGCATATCCTTTTGCCTTG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGTGTGTCTGTATCCCCTaGCACCAGACTGGGCACGAT +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGCVCIP*HQTGHD
Trigger: ATCGTGCCCAGTCTGGTGGCAGGGGATACAGACACA...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGCGATGGAGCTGGCACTaGCAATACTATGGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMRWSWH*QYYGAG
Trigger: ACCGGCCCCATAGTATTGGCAGTGCCAGCTCCATCG...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGCAACATGGCGATCCTaGAGTCAAGCTTCCACACAG +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLATWRS*SQASTQ
Trigger: CTGTGTGGAAGCTTGACTGCAGGATCGCCATGTTGC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCACAGAGGAAATATGGTaGCACCAGCCTGTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSTEEIW*HQPVFV
Trigger: CACAAAGACAGGCTGGTGGCACCATATTTCCTCTGT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCTTTCTGGAATCCAACTaGTTCTTATCACCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGFLESN*FLSPPL
Trigger: CAGGGGAGGTGATAAGAAGCAGTTGGATTCCAGAAA...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATACACCAACCAGAACTTaGGAGAACAGCACTCCGCTC +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYTPTRT*ENSTPL
Trigger: GAGCGGAGTGCTGTTCTCCCAAGTTCTGGTTGGTGT...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCACCACGGAGAGATGGTaGAAATCATCTTTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSTTERW*KSSFSW
Trigger: CCACGAGAAAGATGATTTCCACCATCTCTCCGTGGT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTTGGGCGATGGCTTCCTaGTCTGTGTCATCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLWAMAS*SVSSAN
Trigger: GTTTGCTGATGACACAGACCAGGAAGCCATCGCCCA...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTGTTCATGGTTGCGGTaGGGGAGTTCATTACAGACT +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSCSWLR*GSSLQT
Trigger: AGTCTGTAATGAACTCCCCCACCGCAACCATGAACA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATTCCGGTTCTTCTTCTaGGCCTTGGAATTAGTCGGG +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKFRFFF*ALELVG
Trigger: CCCGACTAATTCCAAGGCCCAGAAGAAGAACCGGAA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCAAGAGTGTTCACTCTaGGCTCAAGTCACATTCCCA +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAQECSL*AQVTFP
Trigger: TGGGAATGTGACTTGAGCCCAGAGTGAACACTCTTG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCAGATTATGAACACCTaGCTCGAGGCCAGTAGCACC +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYQIMNT*LEASST
Trigger: GGTGCTACTGGCCTCGAGCCAGGTGTTCATAATCTG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGCTGAAAACCTACAGTaGGGGCAGACAATTCAGGCA +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKAENLQ*GQTIQA
Trigger: TGCCTGAATTGTCTGCCCCCACTGTAGGTTTTCAGC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGCAGAAGACAGGGAGTaGTCATCTTGGGGGAATAAG +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKAEDRE*SSWGNK
Trigger: CTTATTCCCCCAAGATGACCACTCCCTGTCTTCTGC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCGAGAATGGAAATCATTaGAGAGGGGCTGCCCTAAAG +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSENGNH*RGAALK
Trigger: CTTTAGGGCAGCCCCTCTCCAATGATTTCCATTCTC...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTCCCTTCTCATCTCCTaGAGCTTTGAACAATCCTCC +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSSLLIS*SFEQSS
Trigger: GGAGGATTGTTCAAAGCTCCAGGAGATGAGAAGGGA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCACTCCTCCCATTGCTaGTCCCTTCTCATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGHSSHC*SLLISW
Trigger: CCAGGAGATGAGAAGGGACCAGCAATGGGAGGAGTG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGGTCCCATTCATCATATaGTACAGAGATGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEVPFII*YRDEPS
Trigger: ACTGGGCTCATCTCTGTATCATATGATGAATGGGAC...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCCACACTTTCCACAATaGCAAATGGTGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVPHFPQ*QMVPPP
Trigger: TGGAGGAGGCACCATTTGTCATTGTGGAAAGTGTGG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGCCCATACGTCAGCGCTaGATGGCTCTAAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMPIRQR*MALRRQ
Trigger: CTGCCTTCTTAGAGCCATTCAGCGCTGACGTATGGG...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTCTACCCTCCCCTGCTaGGAGGGCCCATGGCATCAT +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLESTLPC*EGPWHH
Trigger: ATGATGCCATGGGCCCTCTCAGCAGGGGAGGGTAGA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGGAGGTAAGAGGAAGATaGGGGGATGAGTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMEVRGR*GDESLT
Trigger: GGTCAGGGACTCATCCCCTCATCTTCCTCTTACCTC...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCGCAGGGAAATACATATaGAGGATGTTTCCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGAGKYI*RMFPKF
Trigger: GAACTTGGGAAACATCCTTCATATGTATTTCCCTGC...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCAGGGTGTCAAGCAATaGCAGGGCCTTTTTAGAGAG +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYQGVKQ*QGLFRE
Trigger: CTCTCTAAAAAGGCCCTGTCATTGCTTGACACCCTG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCTGTGTAGCAGCCTACTaGGCATGTATTTCCTATATG +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGCVAAY*ACISYM
Trigger: CATATAGGAAATACATGCTCAGTAGGCTGCTACACA...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATTCTTGGGGATGCAATaGATGACAAGGGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKFLGMQ*MTRGWD
Trigger: ATCCCATCCCCTTGTCATTCATTGCATCCCCAAGAA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGCTCGCTGAGCTAGACTaGGAGTTAGAAATTTGGACA +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPELAELD*ELEIWT
Trigger: TGTCCAAATTTCTAACTCTCAGTCTAGCTCAGCGAG...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGGAATGACAAATCTCTaGGGGAATACACCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAGMTNL*GNTPEH
Trigger: ATGCTCTGGTGTATTCCCTCAGAGATTTGTCATTCC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTAGAGCTCACAGGGAATaGCAAATCTCTGAGGGAATA +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCARAHRE*QISEGI
Trigger: TATTCCCTCAGAGATTTGTCATTCCCTGTGAGCTCT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTTGCCGGATGGCTATATaGCTCATTCATGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCACRMAI*LIHAFF
Trigger: GAAGAAAGCATGAATGAGTCATATAGCCATCCGGCA...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCGGACAAGATTTCCTGTaGAAATGTGTACTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGGQDFL*KCVLSR
Trigger: CCTGGAAAGTACACATTTTCACAGGAAATCTTGTCC...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCTGTTCAGGGTTCCGTaGGGGTTTGGAAAAATAGTT +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSLFRVP*GFGKIV
Trigger: AACTATTTTTCCAAACCCTCACGGAACCCTGAACAG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAAGCAAAGAGAGGTCATaGCAAAACCATCCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKSKERS*QNHPWL
Trigger: AAGCCAGGGATGGTTTTGTCATGACCTCTCTTTGCT...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCACACAGGAAAGCTATaGCCATTTCCCCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVHTGKL*PFPLCH
Trigger: ATGGCAGAGGGGAAATGGTCATAGCTTTCCTGTGTG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCCCAGGACAATTGAATaGGACTCTCTAGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYPRTIE*DSLGDE
Trigger: CTCATCCCCTAGAGAGTCTCATTCAATTGTCCTGGG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAGTCCACCAGGCTCTCTaGCATCAGCGAGGCACCTGT +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVVHQAL*HQRGTC
Trigger: ACAGGTGCCTCGCTGATGGCAGAGAGCCTGGTGGAC...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGTCCCCTTTGGGTTCTaGACAGGTACGGAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLVPFGF*TGTELL
Trigger: TAACAACTCCGTACCTGTGCAGAACCCAAAGGGGAC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCTTTTTGGATGGCAATaGCATAGCCAGTGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCALFGWQ*HSQWKQ
Trigger: TTGCTTCCACTGGCTATGGCATTGCCATCCAAAAAG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGTCGCCACCCCATGGATaGAGCTGTAGATACCTCTGC +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMSPPHG*SCRYLC
Trigger: GCAGAGGTATCTACAGCTGCATCCATGGGGTGGCGA...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAAAGGAGGAGAGATGGTaGTGGTCACCAGGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLKEERW*WSPGLP
Trigger: GGGCAACCCTGGTGACCAGCACCATCTCTCCTCCTT...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTTTTATGTGTCCTGTGTaGAACATGGCGATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLFMCPV*NMAILQ
Trigger: CTGCAGGATCGCCATGTTGCACACAGGACACATAAA...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCGTGTTCGAGCTCTGTaGTCACTCAACTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYRVRAL*SLNFSS
Trigger: GGATGAGAAGTTGAGTGAGCACAGAGCTCGAACACG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCAAGTTATTGGGCATCTaGATTTTCCCAGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTKLLGI*IFPGDF
Trigger: GAAGTCTCCTGGGAAAATGCAGATGCCCAATAACTT...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCGCTCTTCCTCAAGTTTaGCAAGCATTTGGTTTGACA +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTALPQV*QAFGLT
Trigger: TGTCAAACCAAATGCTTGGCAAACTTGAGGAAGAGC...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCAAACCACCAATAACTaGAAGCCCTCCATAACCTCA +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAQTTNN*KPSITS
Trigger: TGAGGTTATGGAGGGCTTGCAGTTATTGGTGGTTTG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGGGGACAAGAGCTCACTaGCCCATCCCTTCTCTGATC +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMGTRAH*PIPSLI
Trigger: GATCAGAGAAGGGATGGGGCAGTGAGCTCTTGTCCC...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTAAACAAGGGCTGGTTTaGTTTTCTGACACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAKQGLV*FSDTSK
Trigger: CTTGGAGGTGTCAGAAAAGCAAACCAGCCCTTGTTT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGGACGCCAGCACTACTaGATGGTGGTGATCAAGAAT +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVGRQHY*MVVIKN
Trigger: ATTCTTGATCACCACCATCCAGTAGTGCTGGCGTCC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAGCCGGTGGCTGGGAATaGAGGGTTTTCCTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLAGGWE*RVFLSC
Trigger: GCAGGAAAGGAAAACCCTCCATTCCCAGCCACCGGC...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGTGACTATGCGTTTTTaGCAGGGGACTGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVVTMRF*QGTVFL
Trigger: GAGGAACACAGTCCCCTGCCAAAAACGCATAGTCAC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGAGTGTGTGTTGTTCATaGTTGCGGTGGGGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVSVCCS*LRWGSS
Trigger: TGAACTCCCCCACCGCAACCATGAACAACACACACT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTCAAGAAAGGAGCAAATaGGAACCAAGTTCACCCCCG +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLQERSK*EPSSPP
Trigger: CGGGGGTGAACTTGGTTCCCATTTGCTCCTTTCTTG...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGGAGGAGAGATGGTGCTaGTCACCAGGGTTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEEERWC*SPGLPP
Trigger: TGGGGGCAACCCTGGTGACCAGCACCATCTCTCCTC...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAAGTTGTAATCAGTTTTaGGGGGAAGAAGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKSCNQF*GEEACS
Trigger: CGAGCAGGCTTCTTCCCCCCAAAACTGATTACAACT...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCATAAAGAGCCGCTATTaGCACCATTGCTCACATACC +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSIKSRY*HHCSHT
Trigger: GGTATGTGAGCAATGGTGCCAATAGCGGCTCTTTAT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCAACCACTTCTGCAATaGAAGGGAATGATAGAGGGT +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAQPLLQ*KGMIEG
Trigger: ACCCTCTATCATTCCCTTCCATTGCAGAAGTGGTTG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAATCACAACATGGCTGTaGCCAGTGCAGGGAAATACA +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKITTWL*PVQGNT
Trigger: TGTATTTCCCTGCACTGGCCACAGCCATGTTGTGAT...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTATTTACAGAGAAGGCTaGCCGGGAGAAGGAACGAAA +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLIYREG*PGEGTK
Trigger: TTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAAT...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTGCAAGGGGGACAGATaGAGTCACAGCCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLECKGDR*SHSLVA
Trigger: GGCCACCAGGCTGTGACTCCATCTGTCCCCCTTGCA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCACACATGCTCAGAGGTaGCTTAATATTCCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSTHAQR*LNIPEH
Trigger: GTGCTCTGGAATATTAAGCCACCTCTGAGCATGTGT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCAGAGCATCTGGATGTaGGTGTCATCGTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYQSIWM*VSSSLH
Trigger: GTGAAGAGACGATGACACCCACATCCAGATGCTCTG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGATGCTGTTGGAGCACTaGCTCCTGTCACGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMMLLEH*LLSRGG
Trigger: TCCTCCACGTGACAGGAGCCAGTGCTCCAACAGCAT...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGGACTGGGAGTGGGGTaGGAAACAATCAGCAAAACA +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLGLGVG*ETISKT
Trigger: TGTTTTGCTGATTGTTTCCCACCCCACTCCCAGTCC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGAAAATCAGCCCAGTGTaGTGGTATGCACCAGTAGTA +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEKISPV*WYAPVV
Trigger: TACTACTGGTGCATACCACCACACTGGGCTGATTTT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp GTTTGTTCAAGAATCCACTCTGCCACCAATGACCTTTaGTTCTGTTCACCACCACTATCGAGTCTCATGGGG +
Preference number: 4 (lower is better)
Translates to: VCSRIHSATNDL*FCSPPLSSLMG
Trigger: CCCCATGAGACTCGATAGTGGTGGTGAACAGAACAAAAGGTCATTGGTGGCAGAGTGGATTCTTGAACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp TGCTCTTTCAAGTTTCCCTACTTTCCGAAGCTATCATaGAAGCCAGTAACCAAGGGGGAACCATGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: CSFKFPYFPKLS*KPVTKGEPCAS
Trigger: TGAGGCACATGGTTCCCCCTTGGTTACTGGCTTCAATGATAGCTTCGGAAAGTAGGGAAACTTGAAAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp GGTGAGGAAGGGTTTCCAAGTAAGGAGCTTGGAAGGTaGTTCTCAACGATAAAACCCACTTTGCAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: GEEGFPSKELGR*FSTIKPTLQWL
Trigger: TAGCCACTGCAAAGTGGGTTTTATCGTTGAGAACAACCTTCCAAGCTCCTTACTTGGAAACCCTTCCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp TGCCAAGCATTTGGTTTGACAGCAGGGCCTTTGCAATaGCTTTCTCTTTGCCTTTGCATAGAAAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: CQAFGLTAGPLQ*LSLCLCIESPK
Trigger: CTTGGGGCTTTCTATGCAAAGGCAAAGAGAAAGCAATTGCAAAGGCCCTGCTGTCAAACCAAATGCTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp TTTCCATGTCCTCTTTACAGCCAAACTCCTAAAGCGTaGCCTATTCCTGTTGTCTCTACCTCCTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FPCPLYSQTPKA*PIPVVSTSSPS
Trigger: GGAAGGAGAGGAGGTAGAGACAACAGGAATAGGCAACGCTTTAGGAGTTTGGCTGTAAAGAGGACATGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp TCTCTGATCTCCACTGTAACATTGCCTCTAGCTCCCTaGAAATGTTTCCACAAGCGTCAGGGCTACTCTGAA +
Preference number: 4 (lower is better)
Translates to: SLISTVTLPLAP*KCFHKRQGYSE
Trigger: TTCAGAGTAGCCCTGACGCTTGTGGAAACATTTCAAGGGAGCTAGAGGCAATGTTACAGTGGAGATCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp CAAGTAGATTCGCCAGTCCAAGACTCCTACCAACAATaGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: QVDSPVQDSYQQ*ETNWARGFSQT
Trigger: TGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCTTGGACTGGCGAATCTACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGATCAAGAATCACCCTTaGCGAGCACTCTCGATAGAG +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVIKNHP*RALSIE
Trigger: CTCTATCGAGAGTGCTCGTCAAGGGTGATTCTTGAT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATGACAGATTAAGGGAGTaGGCATGTTGGGAATGTCCA +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYDRLRE*ACWECP
Trigger: TGGACATTCCCAACATGCTCACTCCCTTAATCTGTC...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGGTGAGAGTCTGTGCTaGAATGAAATCGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVGESLC*NEIEDL
Trigger: CAGATCCTCGATTTCATTTCAGCACAGACTCTCACC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTCTTATTCCAGAAGGATaGAGGGAGACACAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLLIPEG*RETQPK
Trigger: TTTTGGCTGTGTCTCCCTTCATCCTTCTGGAATAAG...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGTTTTCCAATGTTAAGTaGAGGGAGCATCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEFSNVK*REHQFC
Trigger: GCAGAACTGATGCTCCCTTCACTTAACATTGGAAAA...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAGGAAGATGAGGGGATaGGTCCCTGACCCCTGGACA +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLERKMRG*VPDPWT
Trigger: TGTCCAGGGGTCAGGGACTCATCCCCTCATCTTCCT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTGCTTAGAGCCAAATTaGACCCTATGTAAAACCCTG +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSCLEPN*TLCKTL
Trigger: CAGGGTTTTACATAGGGTTCAATTTGGCTCTAAGCA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCAAAGACTCAGATGACTaGGACGATTGTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSKDSDD*DDCFSI
Trigger: GATGCTGAAACAATCGTCTCAGTCATCTGAGTCTTT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGTTCCCAAGTTCTGGCTaGGGATACACAGTGACAGAT +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVFPSSG*GYTVTD
Trigger: ATCTGTCACTGTGTATCCTCAGCCAGAACTTGGGAA...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGTTACTTTCATTCGAATaGCAGACAGCTCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPELLSFE*QTAQLS
Trigger: ACTGAGCTGAGCTGTCTGTCATTCGAATGAAAGTAA...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGAGTGAGCCAGAACTGTaGCAAGGTTCTTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVSEPEL*QGSFGA
Trigger: AGCACCAAAAGAACCTTGTCACAGTTCTGGCTCACT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGGGAAGTAGCGTGTGGTaGAATACAGTGGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGGSSVW*NTVVLL
Trigger: CAACAGGACCACTGTATTTCACCACACGCTACTTCC...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCTCCACCTCTGCTCATaGTGTTTCCAAGAAGAGATG +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVLHLCS*CFQEEM
Trigger: CATCTCTTCTTGGAAACATCATGAGCAGAGGTGGAG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATTTGACTGTGCTAGACTaGTTGGGCTCGAGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYLTVLD*LGSSLE
Trigger: TTCCAAACTCGAGCCCAATCAGTCTAGCACAGTCAA...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATGCTGACCAAAACTACTaGCACCTTCGGAGTATCATG +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYADQNY*HLRSIM
Trigger: CATGATACTCCGAAGGTGTCAGTAGTTTTGGTCAGC...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCCACTCAGAATCTTCTTaGCTGGAGAATGGAAATCAT +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTHSESS*LENGNH
Trigger: ATGATTTCCATTCTCCAGTCAAGAAGATTCTGAGTG...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCGCTATACATTTTCCCTaGACTCCAGGTCCATATATC +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSAIHFP*TPGPYI
Trigger: GATATATGGACCTGGAGTTCAGGGAAAATGTATAGC...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGCTGGTTTGCTTTTCTaGCACCTCCAAGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLAGLLF*HLQAME
Trigger: TTCCATTGCTTGGAGGTGTCAGAAAAGCAAACCAGC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCAGGCTCCTTGGCCATaGGACAGAGTTCTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYQAPWP*DRVLLN
Trigger: ATTTAGAAGAACTCTGTCTCATGGCCAAGGAGCCTG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCAGCTATTCTCAATGGTaGTGCGGATCTTGTTTACAA +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTSYSQW*CGSCLQ
Trigger: TTGTAAACAAGATCCGCAGCACCATTGAGAATAGCT...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCACAATGACAAATGGTaGCTCCTCCAGGGTCACAAT +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVHNDKW*LLQGHN
Trigger: ATTGTGACCCTGGAGGAGGCACCATTTGTCATTGTG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATTTTCAGGGAGAGCAATaGATCATCTACACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYFQGEQ*IIYTPL
Trigger: CAGAGGGGTGTAGATGATGCATTGCTCTCCCTGAAA...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCCTTTGTAGAATCTTTTaGTCCCAAGTGTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGLCRIF*SQVWAK
Trigger: TTTTGCCCACACTTGGGAGCAAAAGATTCTACAAAG...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGCTGCACTCATGGAGTaGAGCTCATTTCTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLAALME*SSFLLK
Trigger: CTTTAAGAGAAATGAGCTGCACTCCATGAGTGCAGC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGGCTCCTGAGGGTATCTaGGGAATCTCACAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGAPEGI*GISQFW
Trigger: CCAAAACTGTGAGATTCCGCAGATACCCTCAGGAGC...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCGTATCATGTCATACATaGGTTTTTGGCACTACTGAC +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGVSCHT*VFGTTD
Trigger: GTCAGTAGTGCCAAAAACGCATGTATGACATGATAC...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCGTAGGTTTAAGACTTaGTCTTCTTGGGGATGCAAT +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSRRFKT*SSWGCN
Trigger: ATTGCATCCCCAAGAAGAGCAAGTCTTAAACCTACG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCACAGTGGCAGAAGATaGCTCCCAAAGGGGAATAAT +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYHSGRR*LPKGNN
Trigger: ATTATTCCCCTTTGGGAGGCATCTTCTGCCACTGTG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCCACCTCCACCTAGATaGTTCACTATCCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGPPPPR*FTILLA
Trigger: AGCAAGGAGGATAGTGAAGCATCTAGGTGGAGGTGG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAATTTTGGAGCCCCCATaGTTCCCTTTCTTCAGGATT +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKILEPP*FPFFRI
Trigger: AATCCTGAAGAAAGGGAAGCATGGGGGCTCCAAAAT...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTAGTTCATGTGGATCTTaGTGTTCCGGAGCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLSSCGS*CSGASS
Trigger: AGAGCTTGCTCCGGAACAGCAAGATCCACATGAACT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCAAGACCTCATTTGCCTaGTTGTCATTCTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGKTSFA*LSFFLQ
Trigger: TTGGAGAAAGAATGACAAGCAGGCAAATGAGGTCTT...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCTCTGCCTCATTTTTCTaGATGACACTTTGCACTATC +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTSASFF*MTLCTI
Trigger: GATAGTGCAAAGTGTCATGCAGAAAAATGAGGCAGA...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCTATCCCCCTTAATCTaGCTCATTTTTCTGCATGAC +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSLSPLI*LIFLHD
Trigger: GTCATGCAGAAAAATGAGGCAGATTAAGGGGGATAG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCATGTAGGACACAGGTaGTCTGAGCTAATCCATTTA +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAHVGHR*SELIHL
Trigger: TAAATGGATTAGCTCAGAGCACCTGTGTCCTACATG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATAAATCATCTTTCTCGTaGGCATCCTTGATGGCCACC +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYKSSFS*ASLMAT
Trigger: GGTGGCCATCAAGGATGCCCACGAGAAAGATGATTT...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGGGTCGGTCTCATTCATaGCTACCAGTTCCACCCGGG +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEGRSHS*LPVPPG
Trigger: CCCGGGTGGAACTGGTAGCCATGAATGAGACCGACC...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGCTTCAAAGATGTAGGTaGCTTCTTCCTTGGTACAGT +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPELQRCR*LLPWYS
Trigger: ACTGTACCAAGGAAGAAGCCACCTACATCTTTGAAG...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTCGCCTTCTTCCTCCTaGAGGTGCCTCATGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLESPSSS*RCLMPS
Trigger: AGAGGGCATGAGGCACCTCCAGGAGGAAGAAGGCGA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCCCTATGTAAAACCCTaGCCAAAGTGCATGAACATT +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAPYVKP*PKCMNI
Trigger: AATGTTCATGCACTTTGGCCAGGGTTTTACATAGGG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGATAGGAGTCAGACCTaGGGTTTGCTTAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVDRSQT*GLLRAK
Trigger: TTTGGCTCTAAGCAAACCCCAGGTCTGACTCCTATC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCTGACAGAGGAAATATaGTGCCACCAGCCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVLTEEI*CHQPVF
Trigger: AAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCCAGTTTTGGATGGATTaGGTGTTGTTTCATACCCAT +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTQFWMD*VLFHTH
Trigger: ATGGGTATGAAACAACACCCAATCCATCCAAAACTG...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGGGCCTGATGGATTTATaGACCAGAACAACAGAGGGG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGGLMDL*TRTTEG
Trigger: CCCCTCTGTTGTTCTGGTCCATAAATCCATCAGGCC...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCACAAGAAATTATTGCTaGCAGACTACGGCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGTRNYC*QTTASE
Trigger: TTCACTTGCCGTAGTCTGCCAGCAATAATTTCTTGT...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCGTTATTCAGCTTGTCTaGATTATGGGACACACACAT +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTVIQLV*IMGHTH
Trigger: ATGTGTGTGTCCCATAATCCAGACAAGCTGAATAAC...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCTCTGTAGATGTATGTaGAGTGTGTGTGTGTCTACA +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCALCRCM*SVCVST
Trigger: TGTAGACACACACACACTCCACATACATCTACAGAG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATTCCACCCAGATATCTaGCTTCTGTCAATAGGCCTT +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKFHPDI*LLSIGL
Trigger: AAGGCCTATTGACAGAAGCCAGATATCTGGGTGGAA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAAGTTTGCCAAGCATTTaGTTTGACAGCAGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKSLPSI*FDSRAF
Trigger: AAAGGCCCTGCTGTCAAACCAAATGCTTGGCAAACT...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTCTGCCTAAGAATCAGTaGTTCATCACCAGCCACAAC +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLLPKNQ*FITSHN
Trigger: GTTGTGGCTGGTGATGAACCACTGATTCTTAGGCAG...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAGTCGTCGGTGCTCCCTaGAGAGGACATCACACAGGA +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVVVGAP*RGHHTG
Trigger: TCCTGTGTGATGTCCTCTCCAGGGAGCACCGACGAC...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGAAAAGAACTTGGAGGTaGATGGGCTGGGGATCTGAG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGKRTWR*MGWGSE
Trigger: CTCAGATCCCCAGCCCATCCACCTCCAAGTTCTTTT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTACTCCTACCAACAATTaGAAACCAACTGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLTPTNN*KPTGQG
Trigger: CCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCGACACCTCCAAGCAATaGAAGTATGCATTAAAGAGT +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTDTSKQ*KYALKS
Trigger: ACTCTTTAATGCATACTTCCATTGCTTGGAGGTGTC...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTCAGCAAAACAAGGGCTaGTTTGCTTTTCTGACACCT +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLQQNKG*FAFLTP
Trigger: AGGTGTCAGAAAAGCAAACCAGCCCTTGTTTTGCTG...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGAGTCTCAGGAAGTTCTaGCACTCACCCTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVSLRKF*HSPLSL
Trigger: CAATGACAAGGGTGAGTGCCAGAACTTCCTGAGACT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp AAAAGCATACTCCCATTATCCCATTTACCAGCCCACTaGCATCTGTGCCCAAATGCACTATCTCCCTGCTAT +
Preference number: 4 (lower is better)
Translates to: KSILPLSHLPAH*HLCPNALSPCY
Trigger: ATAGCAGGGAGATAGTGCATTTGGGCACAGATGCAAGTGGGCTGGTAAATGGGATAATGGGAGTATGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGAGCTTGCTGTTCAATTaGTGGGCCAAACTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVSLLFN*WAKLEE
Trigger: TTCTTCCAGTTTGGCCCATCAATTGAACAGCAAGCT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGGGTAGCCATCTTCACTaGAGGACAAATTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMGSHLH*RTNSSP
Trigger: AGGGGAGGAATTTGTCCTTCAGTGAAGATGGCTACC...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTCTGTTTTATTCTCAGTaGCTATGCGTTTTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLLFYSQ*LCVFGR
Trigger: CCTGCCAAAAACGCATAGTCACTGAGAATAAAACAG...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCATTCCAGGTTCCATTaGTTTTCTTCCCATGCTTGC +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYHSRFH*FSSHAC
Trigger: GCAAGCATGGGAAGAAAATCAATGGAACCTGGAATG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGTGTGACAAATGCCAGTaGGCCAGAGAGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMCDKCQ*ARELPV
Trigger: AACTGGAAGCTCTCTGGCTCACTGGCATTTGTCACA...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATTGGTTCAAACTGGTTaGAACAATTGCCAACCACTG +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKLVQTG*NNCQPL
Trigger: CAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCTGGAGGGAGTGACTTaGAGAGACATGGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLELEGVT*RDMAAS
Trigger: GGAAGCTGCCATGTCTCTTCAAGTCACTCCCTCCAG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGAATCATCTCACCACTaGGTTTCTAGTGGATCCCAT +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLESSHH*VSSGSH
Trigger: ATGGGATCCACTAGAAACTCAGTGGTGAGATGATTC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCTCAATATCACTGCAGTaGCATCATTTATGCACACAT +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTSISLQ*HHLCTH
Trigger: ATGTGTGCATAAATGATGTCACTGCAGTGATATTGA...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAAAAGAGGGAATTCAATaGGGCCTGATGGATTTATGG +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKKEGIQ*GLMDLW
Trigger: CCATAAATCCATCAGGCCTCATTGAATTCCCTCTTT...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGGTCTACAAGGCTGTGTaGTTAGTGAGCCAGAACTGT +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGVYKAV*LVSQNC
Trigger: ACAGTTCTGGCTCACTAATCACACAGCCTTGTAGAC...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGTCCCTTTGGGAGAAGTaGTCCTGTAGACAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMSLWEK*SCRQSL
Trigger: GAGGCTTTGTCTACAGGATCACTTCTCCCAAAGGGA...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATGATGTTGTCTCCCCCTaGGGTAATGAATCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYDVVSP*GNESLY
Trigger: ATAAAGGGATTCATTACCTCAGGGGGAGACAACATC...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTTTCTGGCTTTATTGGTaGCACAAAAGGAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLFWLYW*HKRKLQ
Trigger: CTGGAGCTTCCTTTTGTGTCACCAATAAAGCCAGAA...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGTTGTGCTGTTCAGGTaGATATCTGAGAGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLVVLFR*ISESKV
Trigger: TACTTTGCTCTCAGATATTCACCTGAACAGCACAAC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCATTTCTGTCAAACCTTaGGGGATCAATGATCCACAA +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSISVKP*GINDPQ
Trigger: TTGTGGATCATTGATCCCTCAAGGTTTGACAGAAAT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCTTCAGATTTCTATGTaGCCCATTTCTCGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYLQISM*PISRAC
Trigger: ACAGGCACGAGAAATGGGTCACATAGAAATCTGAAG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCACATTGTCGCAGTGTTaGAACTCTGAGATAAGAATT +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTTLSQC*NSEIRI
Trigger: AATTCTTATCTCAGAGTTTCAACACTGCGACAATGT...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTACCCTTGGGATTAAATaGAATCTGCTGATTCTACTC +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCATLGIK*NLLILL
Trigger: GAGTAGAATCAGCAGATTTCATTTAATCCCAAGGGT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATGGCCCAAGCAACTATaGTCTCTTACCAGGATTATT +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKWPKQL*SLTRII
Trigger: AATAATCCTGGTAAGAGATCATAGTTGCTTGGGCCA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAACCTGGTTAGTCCCCTaGAGCCAGTCCCTCTATGTT +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLTWLVP*SQSLYV
Trigger: AACATAGAGGGACTGGCTTCAGGGGACTAACCAGGT...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGCACTGCAGTTGCCCTTaGCTCCACATCTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMHCSCP*LHISCF
Trigger: AAAGCAAGAGATGTGGAGTCAAGGGCAACTGCAGTG...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTAGATGTGGCGTTAGATaGGCCAAGATGAACATAATT +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCARCGVR*AKMNII
Trigger: AATTATGTTCATCTTGGCTCATCTAACGCCACATCT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAACTCCAGAATCTCAATTaGTCCCTGCATGTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKLQNLN*SLHVQN
Trigger: ATTTTGGACATGCAGGGATCAATTGAGATTCTGGAG...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGGATTCCAGGTGTGGGTaGGGCAGGCTGTATAAAGAA +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMDSRCG*GRLYKE
Trigger: TTCTTTATACAGCCTGCCTCACCCACACCTGGAATC...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAGCCACCCAGGACAATTaGATGAGACTCTCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLATQDN*MRLSRG
Trigger: TCCCCTAGAGAGTCTCATTCAATTGTCCTGGGTGGC...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCGAGAGCAGCTCACAATaGAGAATCCAGAGTAATTAT +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSESSSQ*RIQSNY
Trigger: ATAATTACTCTGGATTCTGCATTGTGAGCTGCTCTC...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGAGCATTACGGAAGCTTaGTGTTCAATTGATGGGCCA +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVSITEA*CSIDGP
Trigger: TGGCCCATCAATTGAACAGCAAGCTTCCGTAATGCT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGGCCAAACAATCACACTaGTTGGGGATATTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEAKQSH*LGILKE
Trigger: TTCTTTCAATATCCCCAAGCAGTGTGATTGTTTGGC...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGTATGTACCTTGTTCTTaGAGGATTGCTCACCGCCTT +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVYVPCS*RIAHRL
Trigger: AAGGCGGTGAGCAATCCTGCAAGAACAAGGTACATA...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCTTTCTCTTAACTGTCTaGTCTGTAGCAGTTGTAATC +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTFLLTV*SVAVVI
Trigger: GATTACAACTGCTACAGAGCAGACAGTTAAGAGAAA...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCTCTACTCATCTACTCTaGTTTTCACCTTCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGSTHLL*FSPSVL
Trigger: AAGAACTGAAGGTGAAAAGCAGAGTAGATGAGTAGA...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGGTAACAAGAAATTATTaGTGGCAGACTACGGCAAGT +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPEVTRNY*WQTTAS
Trigger: ACTTGCCGTAGTCTGCCAGCAATAATTTCTTGTTAC...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTTAAGATTGTGTGTGTaGATTAGGGAGGTACATAGG +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSLRLCV*IREVHR
Trigger: CCTATGTACCTCCCTAATGCACACACACAATCTTAA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTAGAATCGAGCTACAATaGTTATCAATGTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCARIELQ*LSMSVW
Trigger: CCAGACAGACATTGATAAGCATTGTAGCTCGATTCT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTCTTTCTCTTTGCCTTTaGATAGAAAGCCCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLLSLCL*IESPKS
Trigger: AGACTTGGGGCTTTCTATGCAAAGGCAAAGAGAAAG...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGATCATATCACTCTATaGTCCGAACCTTCTAGCAAC +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKDHITL*SEPSSN
Trigger: GTTGCTAGAAGGTTCGGAGCATAGAGTGATATGATC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACCAGTCAGCCTCACCTaGAGGATTCCTGTCTTACAC +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLPVSLT*RIPVLH
Trigger: GTGTAAGACAGGAATCCTGCAGGTGAGGCTGACTGG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCAACCCCATAGTGGATaGATATCATGTTTCCATCAT +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSQPHSG*ISCFHH
Trigger: ATGATGGAAACATGATATGCATCCACTATGGGGTTG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTCTTCCTAGTGATGTATaGAGGGGAAGAGTGTCAATC +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLLPSDV*RGRVSI
Trigger: GATTGACACTCTTCCCCTGCATACATCACTAGGAAG...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCTACATAGAGGAGCTTTaGAGTATGTCTATATCTAGC +
Preference number: 4 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTYIEEL*SMSISS
Trigger: GCTAGATATAGACATACTGCAAAGCTCCTCTATGTA...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGGCAAACACCACCCCCTaGATCTTCCGGTCAGACATG +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEANTTP*IFRSDM
Trigger: CATGTCTGACCGGAAGATCCAGGGGGTGGTGTTTGC...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGGTCACAATGCTCAGATaGTCATCCTCCTGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGVTMLR*SSSCSS
Trigger: TGAAGAGCAGGAGGATGACCATCTGAGCATTGTGAC...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAAGTAGTTGTGCAGCTTaGAGGGACAGCTGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVSSCAA*RDSCGR
Trigger: TCTGCCGCAGCTGTCCCTCCAAGCTGCACAACTACT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGACACAGGGGTTGGACTaGTTCCCTATACAGATGTCC +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMTQGLD*FPIQMS
Trigger: GGACATCTGTATAGGGAACCAGTCCAACCCCTGTGT...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCATATATAAACACAAATaGCCTCCCAACCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSIYKHK*PPNLCL
Trigger: CAAGCAGAGGTTGGGAGGCCATTTGTGTTTATATAT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAGTCCTGTGTGCAACATaGCGATCCTGCAGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLVLCAT*RSCSQA
Trigger: AGCTTGACTGCAGGATCGCCATGTTGCACACAGGAC...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGAGAGCACATAAGGTATaGCCACAGTCCCTGGAAATG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGRAHKV*PQSLEM
Trigger: CATTTCCAGGGACTGTGGCCATACCTTATGTGCTCT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTCTGAATCAATGTGGTTaGAATGAGTTGAGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLLNQCG*NELRVG
Trigger: TCCCACCCTCAACTCATTCCAACCACATTGATTCAG...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAAGAGAGAAATACAATTaGCTGGAGAGCACCTCAGAA +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKREKYN*LESTSE
Trigger: TTCTGAGGTGCTCTCCAGCCAATTGTATTTCTCTCT...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGAAGGGAAGACGCAAGTaGGAAAACAAGCTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMKGRRK*ENKLVG
Trigger: CCCTACCAGCTTGTTTTCCCACTTGCGTCTTCCCTT...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAACCTATGAAATAAGATaGCCCATGATAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKTYEIR*PMIAAT
Trigger: AGTGGCAGCTATCATGGGCCATCTTATTTCATAGGT...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTGTTGGACCACCACCTaGGGTCTACAAGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLECWTTT*GLQGCV
Trigger: CACACAGCCTTGTAGACCCCAGGTGGTGGTCCAACA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCACTCATCTCCGCTTTaGTCCTTGCTCTTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVHSSPL*SLLFQV
Trigger: AACTTGAAAGAGCAAGGACCAAAGCGGAGATGAGTG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCTTCCATAGGGTAAAATaGGAAAATGGAGACGATAAC +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGFHRVK*ENGDDN
Trigger: GTTATCGTCTCCATTTTCCCATTTTACCCTATGGAA...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGTTCCGGAGCAAGCTCTaGGCTCTAAAATTGAGCTTA +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVFRSKL*ALKLSL
Trigger: TAAGCTCAATTTTAGAGCCCAGAGCTTGCTCCGGAA...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTTCTTTTGGAAGTTATTaGGCATCTGCATTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCASFGSY*ASAFSQ
Trigger: CTGGGAAAATGCAGATGCCCAATAACTTCCAAAAGA...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAATGTTTGACTGGCAATaGCCAGGTAGATTTCACCAT +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKMFDWQ*PGRFHH
Trigger: ATGGTGAAATCTACCTGGCCATTGCCAGTCAAACAT...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTATAATTCCCATATCCTaGCCTCTCAGTTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLIIPIS*PLSSLT
Trigger: GGTCAAGGAACTGAGAGGCCAGGATATGGGAATTAT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACACCAGCCACAACCCTaGCAATTCCTTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLHQPQP*QFLSSC
Trigger: GCAAGAGGAAAGGAATTGCCAGGGTTGTGGCTGGTG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGTCCCTCTTATCACTTaGACTTTCATCCCCAGATAC +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVVPLIT*TFIPRY
Trigger: GTATCTGGGGATGAAAGTCCAAGTGATAAGAGGGAC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGGTTCCGTGAGGGTTTaGAAAAATAGTTCACTAGAA +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAGSVRV*KNSSLE
Trigger: TTCTAGTGAACTATTTTTCCAAACCCTCACGGAACC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTGGAGGTGGATGGGCTaGGGATCTGAGAGTCAAGAG +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEWRWMG*GSESQE
Trigger: CTCTTGACTCTCAGATCCCCAGCCCATCCACCTCCA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCAATTGGAAACCAACTaGGCAAGGGGTTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVQLETN*ARGFSQ
Trigger: TTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp TGGGAAAAGCTACCTTTGTGCTCACATAGCCTCTTTTaGGTTCTCCCAGCTTCACTCAAAGAGGATATCAAG +
Preference number: 4 (lower is better)
Translates to: WEKLPLCSHSLF*VLPASLKEDIK
Trigger: CTTGATATCCTCTTTGAGTGAAGCTGGGAGAACCAAAAAGAGGCTATGTGAGCACAAAGGTAGCTTTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp GTTAACACACTGCAGTTGCCCTTGACTCCACATCTCTaGCTTTCATTATATTCACCTGGTTATACCCCAACC +
Preference number: 4 (lower is better)
Translates to: VNTLQLPLTPHL*LSLYSPGYTPT
Trigger: GGTTGGGGTATAACCAGGTGAATATAATGAAAGCAAGAGATGTGGAGTCAAGGGCAACTGCAGTGTGTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTACAGTAAAGAAGAATaGTGGGGCTTTGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSYSKEE*WGFEVS
Trigger: AGAAACTTCAAAGCCCCATCATTCTTCTTTACTGTA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTACATATGATACAGAGATaGGCCCAGTGGGGAACTCCG +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVHMIQR*AQWGTP
Trigger: CGGAGTTCCCCACTGGGCTCATCTCTGTATCATATG...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGCTTCCTCACCTAAATaGAAAGATCAGTTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKASSPK*KDQFGK
Trigger: TTTCCCAAACTGATCTTTTCATTTAGGTGAGGAAGC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTACAATTGCCAACCACTaGGGACTTGTTTATGTACCT +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLTIANH*GLVYVP
Trigger: AGGTACATAAACAAGTCCTCAGTGGTTGGCAATTGT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATTTTCAGGACCGGCAGTaGTACATATTCATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYFQDRQ*YIFISL
Trigger: AAGGGAAATGAATATGTATCACTGCCGGTCCTGAAA...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTATCCTACCCTAGGTACTaGCAGAGGAAATATGGTGCC +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLSYPRY*QRKYGA
Trigger: GGCACCATATTTCCTCTGTCAGTACCTAGGGTAGGA...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGTCAATGTGGTTGGAATaGGTTGAGGGTGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMSMWLE*VEGGMF
Trigger: GAACATCCCACCCTCAACTCATTCCAACCACATTGA...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGAATTCAATGAGGCCTaGTGGATTTATGGACCAGAA +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLEFNEA*WIYGPE
Trigger: TTCTGGTCCATAAATCCATCAGGCCTCATTGAATTC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGAGAGGACAGCATATGTaGGGATTCAATAATCAGATT +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPERGQHM*GFNNQI
Trigger: AATCTGATTATTGAATCCTCACATATGCTGTCCTCT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTCCTCTGTCACTTACTTaGACACATGTAGTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLPLSLT*THVVFQ
Trigger: TTGGAACACTACATGTGTTCAAGTAAGTGACAGAGG...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACCTTATTCCTCCCATTaGGAACAGACCTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLPYSSH*EQTSPP
Trigger: AGGTGGAGAGGTCTGTTCTCAATGGGAGGAATAAGG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGTCTTCTTGCTCTTTTTaGCTTGTCTCTGTAGATGTA +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPESSCSF*LVSVDV
Trigger: TACATCTACAGAGACAAGTCAAAAAGAGCAAGAAGA...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCACTTGATCTTGAGTTaGAGCACTCAGGAACAAGAC +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGHLILS*STQEQD
Trigger: GTCTTGTTCCTGAGTGCTTCAACTCAAGATCAAGTG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGACACAACAGGCATCTTaGCCAGAGCACCAGGACACA +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLETQQAS*PEHQDT
Trigger: TGTGTCCTGGTGCTCTGGTCAAGATGCCTGTTGTGT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTTTGTCTGCTTGTCACTaGATCTATTTCCCATTCAAC +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLLSACH*IYFPFN
Trigger: GTTGAATGGGAAATAGATTCAGTGACAAGCAGACAA...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAATCACTCCCAGGTGGTaGGCATTTCCACTTGCACCT +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVITPRW*AFPLAP
Trigger: AGGTGCAAGTGGAAATGCTCACCACCTGGGAGTGAT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTAAAGTAAGGTATGACTaGGTTGGCTGTGATACCTTA +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLKVRYD*VGCDTL
Trigger: TAAGGTATCACAGCCAACTCAGTCATACCTTACTTT...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGGATTCATCCTTATCTaGCATTATCATAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLGFILI*HYHRGA
Trigger: GGCTCCTCTATGATAATGGCAGATAAGGATGAATCC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAGGACTGTGTTCCTCATaGAGGTTCCACTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVGLCSS*RFHSEG
Trigger: ACCCTCTGAGTGGAACCTGCATGAGGAACACAGTCC...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTATTTCTCTCTGTGCTaGCGTTGGGCACGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEYFSLC*RWARSQ
Trigger: TTGGGACCGTGCCCAACGGCAGCACAGAGAGAAATA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTATTGCTGTCCTTCAGCTaGAGGTTCCCGAACGTTCTC +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVLLSFS*RFPNVL
Trigger: GAGAACGTTCGGGAACCTGCAGCTGAAGGACAGCAA...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACTGTCCTTATATTGCTaGTTACGCCTCTTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLLSLYC*LRLLAA
Trigger: TGCCGCCAAGAGGCGTAAGCAGCAATATAAGGACAG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTAAAACCAGAATGTATTaGCTCCCAATGGTAATTGTC +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAKTRMY*LPMVIV
Trigger: GACAATTACCATTGGGAGGCAATACATTCTGGTTTT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGACAATGACAGTTAACTaGAAGACTGTTCTGAATAGG +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPETMTVN*KTVLNR
Trigger: CCTATTCAGAACAGTCTTGCAGTTAACTGTCATTGT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTATAATTCTCCATTCATaGCCTCAGAGTCCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLIILHS*PQSPQE
Trigger: TTCTTGGGGACTCTGAGGGCATGAATGGAGAATTAT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACGGAGATGTGTGAGCTaGCAAGGTGCCAATGATCAA +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLRRCVS*QGANDQ
Trigger: TTGATCATTGGCACCTTGGCAGCTCACACATCTCCG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTCAAATAATTCCTTTATaGCCCCTAGCATGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLQIIPL*PLACLL
Trigger: TAGGAGACATGCTAGGGGGCATAAAGGAATTATTTG...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCTTCTTGCCCCTCATTaGCATTCCAGACCATCCTCC +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLELLAPH*HSRPSS
Trigger: GGAGGATGGTCTGGAATGGCAATGAGGGGCAAGAAG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGATTGATGGGCCAAACTaGAAGAACATGGAGGATTCA +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVIDGPN*KNMEDS
Trigger: TGAATCCTCCATGTTCTTCCAGTTTGGCCCATCAAT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGAAGTCATTAGGTCTCTaGAACTTTTTGTCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVKSLGL*NFLSLR
Trigger: CCTGAGCGACAAAAAGTTCCAGAGACCTAATGACTT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCTGAGGACTTGTTGTTaGCAAAGGTGCTCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLELRTCC*QRCSRQ
Trigger: CTGGCGAGAGCACCTTTGCCAACAACAAGTCCTCAG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCATGAAAAGATCAGTTTaGGAAAAGCTACCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSMKRSV*EKLPLC
Trigger: GCACAAAGGTAGCTTTTCCCAAACTGATCTTTTCAT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGTTCTTGGTTCAAACTaGTTGAAACAATTGCCAACC +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLVLGSN*LKQLPT
Trigger: GGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAGAAGCAGTGTTTACGTaGCCCTTCGCCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVEAVFT*PFAFFL
Trigger: GAGGAAGAAGGCGAAGGGCCACGTAAACACTGCTTC...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCAGAGAATTCTCCCTTaGGCAACTCCTGATGGCCAC +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEQRILP*ATPDGH
Trigger: GTGGCCATCAGGAGTTGCCCAAGGGAGAATTCTCTG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCATGTATTTCCTATATaGCTTTGGGCTCAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYHVFPI*LWAQRA
Trigger: TGCTCTCTGAGCCCAAAGCCATATAGGAAATACATG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGAGCAACAAATCTGTGTaGGAAGGTGGTAGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGSNKSV*EGGSCS
Trigger: ACTGCAACTACCACCTTCCCACACAGATTTGTTGCT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGGGCCTGGCCATGACATaGGAAGCTGAATCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEGLAMT*EAESLQ
Trigger: TTGCAGAGATTCAGCTTCCCATGTCATGGCCAGGCC...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTATGTGGTGAAATACAGTaGTCCTGTTGGACCACCACC +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLCGEIQ*SCWTTT
Trigger: GGTGGTGGTCCAACAGGACCACTGTATTTCACCACA...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGGATGGAGTCACAGCCTaGTGGCCTAAATTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEDGVTA*WPKFCG
Trigger: CCCACAGAATTTAGGCCACCAGGCTGTGACTCCATC...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCATCAACAGGACCTTATaGATTCCATCAGGTCAAATA +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSINRTL*IPSGQI
Trigger: TATTTGACCTGATGGAATCCATAAGGTCCTGTTGAT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCAGACGCTGAATATTTaGGAGGATTACTTAACGTTT +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSQTLNI*EDYLTF
Trigger: AAACGTTAAGTAATCCTCCCAAATATTCAGCGTCTG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCTAAATTTTAACCAATaGCAAGTGCAGAGCTCACTT +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCALNFNQ*QVQSSL
Trigger: AAGTGAGCTCTGCACTTGCCATTGGTTAAAATTTAG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTATTGGGGGAAAACGGCTaGCAGGATATGACCATGCTG +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVLGENG*QDMTML
Trigger: CAGCATGGTCATATCCTGCCAGCCGTTTTCCCCCAA...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCCTTATCAAGGAATTATaGCTACCTTATGATGTCACA +
Preference number: 4 (lower is better)
Translates to: TVELTHRINSPTASFRTGLIKEL*LPYDVT
Trigger: TGTGACATCATAAGGTAGCCATAATTCCTTGATAAG...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGAGCTTGCTACTTTCTaGAATGTTCAGGGAGAAACA +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVELATF*NVQGET
Trigger: TGTTTCTCCCTGAACATTCCAGAAAGTAGCAAGCTC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAGATAGTCCCTTGCAGTaGACTTCAGGGTGGCACAAG +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVDSPLQ*TSGWHK
Trigger: CTTGTGCCACCCTGAAGTCCACTGCAAGGGACTATC...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTATCTTTCCGGAACAGTTaGCTGATGGGGACACAACCG +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVSFRNS*LMGTQP
Trigger: CGGTTGTGTCCCCATCAGCCAACTGTTCCGGAAAGA...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp TGGTTTAAATGTCTTTGCCATCTAGAACCTGTATCCTaGTTCCCTACTCTATTGCTCTCAGTGCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: WFKCLCHLEPVS*FPTLLLSVLSA
Trigger: AGCAGAGAGCACTGAGAGCAATAGAGTAGGGAACAAGGATACAGGTTCTAGATGGCAAAGACATTTAAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp AGTCCCAGCATGGATCAGGTTATTAGAGACTCAATCTaGGTAGTAAAGTGTCTGGATACAAGCTCTACCCAA +
Preference number: 4 (lower is better)
Translates to: SPSMDQVIRDSI*VVKCLDTSSTQ
Trigger: TTGGGTAGAGCTTGTATCCAGACACTTTACTACCAAGATTGAGTCTCTAATAACCTGATCCATGCTGGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGAAGAAAAGACTCAGATaGCTGAGACGATTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVKKRLR*LRRLFQ
Trigger: CTGAAACAATCGTCTCAGTCATCTGAGTCTTTTCTT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGGTGCAAATATCCAGTTaGAGAAAAGCAACCAACTGG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGVQISS*RKATNW
Trigger: CCAGTTGGTTGCTTTTCTTCAACTGGATATTTGCAC...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCGTTTTTGGCACTACTaGCACCAGCAACATTTAATG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGRFWHY*HQQHLM
Trigger: CATTAAATGTTGCTGGTGTCAGTAGTGCCAAAAACG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGAGGTTAAGTAGCACCTaGGGTCATAAGTGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMRLSST*GHKWLF
Trigger: AAAGAGCCACTTATGACCTCAGGTGCTACTTAACCT...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAGCCATGAGCATAAGGTaGGGAAGTGGAGAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLAMSIR*GSGERK
Trigger: CTTTCTTTCTCCACTTCCTCACCTTATGCTCATGGC...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGAAAGGAGGAAGTTGGTaGTTATGTTGGTTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGKGGSW*LCWFAA
Trigger: TGCTGCAAACCAACATAATCACCAACTTCCTCCTTT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGAAGGAAGGGTCTGAATaGAAAGGAAAGACTGGAAAC +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGKEGSE*KGKTGN
Trigger: GTTTCCAGTCTTTCCTTTTCATTCAGACCCTTCCTT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGGCAGTGTTGAAACTCTaGGATAAGAATTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMAVLKL*DKNSLP
Trigger: GGGCAAGGAATTCTTATCTCAGAGTTTCAACACTGC...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGGTGACCTAACTTTGTaGTCCAAAATCATTCCAATA +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLGDLTL*SKIIPI
Trigger: TATTGGAATGATTTTGGATCACAAAGTTAGGTCACC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGAAATACACAGACGCTaGATATTTGGGAGGATTACT +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLEIHRR*IFGRIT
Trigger: AGTAATCCTCCCAAATATTCAGCGTCTGTGTATTTC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTACCTTCCCCTCTTTCTTaGATCCACCCCATCATGCTT +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVPSPLS*IHPIML
Trigger: AAGCATGATGGGGTGGATTCAAGAAAGAGGGGAAGG...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAGCGTCAGGGCTACTCTaGAGTATTAATGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLASGLL*SINAGI
Trigger: TATCCCAGCATTAATACTTCAGAGTAGCCCTGACGC...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGAAACGGAAGTCTAGATaGTTTGATGCAGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGKRKSR*FDAGHK
Trigger: TTTGTGGCCTGCATCAAATCATCTAGACTTCCGTTT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATATTCTCAATGGTGCTaGGGATCTTGTTTACAAAGT +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKYSQWC*GSCLQS
Trigger: ACTTTGTAAACAAGATCCGCAGCACCATTGAGAATA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGTAGGCATGCATTTCTaGATAGTTATTGCGAATATT +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCAVGMHF*IVIANI
Trigger: AATATTCGCAATAACTATGCAGAAATGCATGCCTAC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGGATCTTGGTACACGTTaGTGTCCTTCAGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEDLGTR*CPSAAG
Trigger: ACCTGCAGCTGAAGGACAGCAACGTGTACCAAGATC...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAAGGCTGTCCTTATATTaGTGCTTACGCCTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVRLSLY*CLRLLA
Trigger: CGCCAAGAGGCGTAAGCAGCAATATAAGGACAGCCT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTATTCTACACACCAGAGTaGCAAGGCTCTGAGGAATTC +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLFYTPE*QGSEEF
Trigger: GAATTCCTCAGAGCCTTGGCACTCTGGTGTGTAGAA...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATATCCTTAGGTGCTACTaGAGATACAAATGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYILRCY*RYKWAK
Trigger: TTTTGCCCATTTGTATCTGCAGTAGCACCTAAGGAT...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTTCAGAACTAACTTATaGCTTAATCCTAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSFRTNL*LNPRIR
Trigger: CCTGATTCTAGGATTAAGGCATAAGTTAGTTCTGAA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGGGTAGAAATAGCTACTaGCCCTCTCTCTTAGCTTAC +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMGRNSY*PSLLAY
Trigger: GTAAGCTAAGAGAGAGGGGCAGTAGCTATTTCTACC...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGAACAAGACCTCATTTaGCTGCTTGTCATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLEQDLI*LLVILS
Trigger: AGAAAGAATGACAAGCAGGCAAATGAGGTCTTGTTC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATTGGTTAAAAATAACATaGAACAACTCACTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYWLKIT*NNSLGE
Trigger: CTCGCCCAGTGAGTTGTTGCATGTTATTTTTAACCA...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGAAACTCCTAAAGCGTTaGCTATTCCTGTTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVKLLKR*LFLLSL
Trigger: TAGAGACAACAGGAATAGGCAACGCTTTAGGAGTTT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGCCTCTGCCTCTAATATaGTTCATTGTTCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMPLPLI*FIVPPS
Trigger: GGAAGGAGGAACAATGAAGCATATTAGAGGCAGAGG...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCAATTCCTTTCCTCTTaGTCTTACAGAAACCTGGCT +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGQFLSS*SYRNLA
Trigger: AGCCAGGTTTCTGTAAGAGCAAGAGGAAAGGAATTG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCTTTATGTTAGAGCTTaGTACTTTCTGGAATGTTCA +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSLYVRA*YFLECS
Trigger: TGAACATTCCAGAAAGTAGCAAGCTCTAACATAAAG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTACCCGCTTTCCCCAGATaGACATACATAGTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVPAFPR*TYIVVH
Trigger: GTGAACCACTATGTATGTGCATCTGGGGAAAGCGGG...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCGTAATCATAAAATGGTaGTTCCGTTATGTCCATTCT +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSVIIKW*FRYVHS
Trigger: AGAATGGACATAACGGAAGCACCATTTTATGATTAC...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAAACAGCACTCCGCTCTaGGCTTCATCTTCAACTCGT +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVNSTPL*ASSSTR
Trigger: ACGAGTTGAAGATGAAGCCCAGAGCGGAGTGCTGTT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGCAGAATCTTTTTGGATaGCAATGCCATAGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMQNLFG*QCHSQW
Trigger: CCACTGGCTATGGCATTGCCATCCAAAAAGATTCTG...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAGCACCTGACTACACATaGGTGCAAGTGTGCATGAAC +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVAPDYT*VQVCMN
Trigger: GTTCATGCACACTTGCACCCATGTGTAGTCAGGTGC...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGAATTCAGGTAATACATaGCCATCTCTGTCTGTATAT +
Preference number: 4 (lower is better)
Translates to: FTEKAGREKERKHYRLPENSGNT*PSLSVY
Trigger: ATATACAGACAGAGATGGCCATGTATTACCTGAATT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATGGTACCCTCATCCCTaGAGTTTTATACATGTATAT +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKWYPHP*SFIHVY
Trigger: ATATACATGTATAAAACTCCAGGGATGAGGGTACCA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTAAACAATTCCCCCAATaGGAAATGAAAACCCATAAC +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLKQFPQ*EMKTHN
Trigger: GTTATGGGTTTTCATTTCCCATTGGGGGAATTGTTT...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCAGAATATTGCTAATGTaGGTAAATACAGGGTTAGAC +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSRILLM*VNTGLD
Trigger: GTCTAACCCTGTATTTACCCACATTAGCAATATTCT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGTTGGTTTGCAGCAATaGTTTTGGATATTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKVGLQQ*FWIFES
Trigger: TGACTCAAATATCCAAAACCATTGCTGCAAACCAAC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGTTCATTTTGGAATCATaGCCACCCAGAAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGFILES*PPRRGK
Trigger: CTTTCCTCTTCTGGGTGGCCATGATTCCAAAATGAA...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTCATGCAACAACTCACTaGGCGAGAAATTTAGAAACA +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLHATTH*ARNLET
Trigger: TGTTTCTAAATTTCTCGCCCAGTGAGTTGTTGCATG...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGGTTCTCAGTGCCCCTTaGCTTCCCAATTTAAGTCAA +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMVLSAP*LPNLSQ
Trigger: TTGACTTAAATTGGGAAGCCAAGGGGCACTGAGAAC...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTGTCTCCTATATTTTTaGTGTCTCCGACATTTTTGT +
Preference number: 4 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSCLLYF*CLRHFC
Trigger: ACAAAAATGTCGGAGACACCAAAAATATAGGAGACA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTACTCACCCTTGTCATTaGAGTCTTTGTTTTATTGAA +
Preference number: 4 (lower is better)
Translates to: LGSSLETLSTMHVFELCATHPCH*SLCFIE
Trigger: TTCAATAAAACAAAGACTCCAATGACAAGGGTGAGT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGCTGTAATCATAAAATaGTGCTTCCGTTATGTCCAT +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKAVIIK*CFRYVH
Trigger: ATGGACATAACGGAAGCACCATTTTATGATTACAGC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp CAAGGTCTCATAAGTATTCTCAGGAGACTATTAATTTaGGAGCCCCCATGCTTCCCTTTCTTCAGGATTTTG +
Preference number: 4 (lower is better)
Translates to: QGLISILRRLLI*EPPCFPFFRIL
Trigger: CAAAATCCTGAAGAAAGGGAAGCATGGGGGCTCCAAAATTAATAGTCTCCTGAGAATACTTATGAGACCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp TCATTCATAAGTGAACAGGTGGGTTGTAAGAGAAGGTaGTTGCAAGATTCTCTGATCTGCGGGTGCTTAATA +
Preference number: 4 (lower is better)
Translates to: SFISEQVGCKRR*LQDSLICGCLI
Trigger: TATTAAGCACCCGCAGATCAGAGAATCTTGCAACAACCTTCTCTTACAACCCACCTGTTCACTTATGAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCAGAAGCAGCAGTGGTaGTTATGGCAATTCCATCTC +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEQKQQW*LWQFHL
Trigger: GAGATGGAATTGCCATAATCACCACTGCTGCTTCTG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTCTCTGACACCCAAGTaGAGAAAGCAAAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLESLTPK*RKQKLC
Trigger: GCAGAGCTTTTGCTTTCTTCACTTGGGTGTCAGAGA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAGGAGGAAAAGTCTCTaGCACCCAAGTGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLERRKSL*HPSEES
Trigger: GCTTTCTTCACTTGGGTGTCAGAGACTTTTCCTCCT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAGCAAGTGAAGCCCACTaGAGGTTGTTTCTTGATCTG +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVASEAH*RLFLDL
Trigger: CAGATCAAGAAACAACCTTCAGTGGGCTTCACTTGC...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGGCTGGTAGGGAAAGGTaGAACAAATGTTATTCAGCT +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMAGRER*NKCYSA
Trigger: AGCTGAATAACATTTGTTTCACCTTTCCCTACCAGC...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCCTTCACATGAAGCCTaGATATTTCTGTCAAACCTT +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGPSHEA*IFLSNL
Trigger: AAGGTTTGACAGAAATATTCAGGCTTCATGTGAAGG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGACCATTGCAACCTTGTaGCAAAATCAAGGTCTCATA +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGTIATL*QNQGLI
Trigger: TATGAGACCTTGATTTTGTCACAAGGTTGCAATGGT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTTTAAGCATAATGCTGTaGGCCAAAATTTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLLSIML*AKISSA
Trigger: TGCAGAAGAAATTTTGGCTCACAGCATTATGCTTAA...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAGACTCACTAACTGAGTaGTCCCAGCTTGAATCTCAA +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLDSLTE*SQLESQ
Trigger: TTGAGATTCAAGCTGGGATCACTCAGTTAGTGAGTC...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTTTTCTGCATAGTTATTaGGAATATTTCTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLFLHSY*EYFSLC
Trigger: GCACAGAGAGAAATATTCGCAATAACTATGCAGAAA...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAGAAGTAGGATTTGCTaGCATGGAGCAAGCACTGGT +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLERSRIC*HGASTG
Trigger: ACCAGTGCTTGCTCCATGGCAGCAAATCCTACTTCT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAGAAAGAGTCAAGGTTaGCTTCTCTTGAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLERKSQG*LLLRHL
Trigger: CAGGTGCCTCAAGAGAAGGCAACCTTGACTCTTTCT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTAGTCGAGAGTCTAAATaGTCAAAAGAGCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLSRESK*SKELCR
Trigger: TCTACAAAGCTCTTTTGAGCATTTAGACTCTCGACT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGCACAGTAGGAAAGATTaGCTGTTGAAAGACAGGACA +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMHSRKD*LLKDRT
Trigger: TGTCCTGTCTTTCAACAGGCAATCTTTCCTACTGTG...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGTGATTATGTTGGTTTaGAGCAATGGTTTTGGATAT +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKVIMLV*SNGFGY
Trigger: ATATCCAAAACCATTGCTGCAAACCAACATAATCAC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCCACAAAGAAAATGCTaGCTTCACATAAAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGPQRKC*LHIKPL
Trigger: AAGAGGCTTTATGTGAAGGCAGCATTTTCTTTGTGG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGCTTGGGGGAATAAGATaGTCCAAATACTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMLGGIR*SKYSSA
Trigger: AGCTGATGAGTATTTGGAGCATCTTATTCCCCCAAG...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGTGGCTTCAGTCTTGTaGAGATATAGATTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVVASVL*RYRFSL
Trigger: CAAAGAAAATCTATATCTGCACAAGACTGAAGCCAC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATATATGACTCATTCATaGTTTCTTCCTTCCAAAACC +
Preference number: 4 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKYMTHS*FLPSKT
Trigger: GGTTTTGGAAGGAAGAAAGCATGAATGAGTCATATA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACAGTTCCTTGACCCCTaGTCCTTCTATAACCTTTTC +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLQFLDP*SFYNLF
Trigger: GAAAAGGTTATAGAAGGAGCAGGGGTCAAGGAACTG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGAGTCACATTGTTTTCTaGACATCTTCCAAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGSHIVF*TSSKEW
Trigger: CCACTCTTTGGAAGATGTGCAGAAAACAATGTGACT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGACGGTTTTTGGTTTTTaGAGCGTTAGTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLETVFGF*SVSGGG
Trigger: GCCTCCTCCACTAACGCTCCAAAAACCAAAAACCGT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGTCTCACAGTTTTGGATaGATTGGGTGTTGTTTCATA +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVSHSFG*IGCCFI
Trigger: TATGAAACAACACCCAATCCATCCAAAACTGTGAGA...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGAGGGTTCTTATGTCATaGTCAAAGGGAGCATTAAAA +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVRVLMS*SKGALK
Trigger: TTTTAATGCTCCCTTTGACCATGACATAAGAACCCT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGTTTTATGTGAATTATTaGGAGGCAAAAGGACAAGGG +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVFYVNY*EAKGQG
Trigger: CCCTTGTCCTTTTGCCTCCCAATAATTCACATAAAA...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAAGGGAGTGGTCATCTTaGGGGAATAAGATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVREWSS*GNKMLQ
Trigger: TTGGAGCATCTTATTCCCCCAAGATGACCACTCCCT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTATTAGAATGTTTGACTaGCAATGGCCAGGTAGATTT +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLIRMFD*QWPGRF
Trigger: AAATCTACCTGGCCATTGCCAGTCAAACATTCTAAT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTTATAAAAACATGTTGTaGCCTATCACAGTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: FATQPHSGCISCFHHHPLYKNML*PITVSS
Trigger: ACTGCTAACTGTGATAGGCCACAACATGTTTTTATA...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAACATCTTCCAAAGAGTaGATTCCGGGAGGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLTSSKE*IPGGQK
Trigger: TTTCTGACCTCCCGGAATCCACTCTTTGGAAGATGT...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGACGCATCAGTCATTGTaGCTAAGTGTAATTCTGATG +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGTHQSL*LSVILM
Trigger: CATCAGAATTACACTTAGCCACAATGACTGATGCGT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCAGAGTTCTTCTAAATaGTCTCTAGAAGGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGQSSSK*SLEGPF
Trigger: GAAAGGACCTTCTAGAGACCATTTAGAAGAACTCTG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACATATAGTTCAGCACTaGTGCATCATAGATGAAGGC +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLHIVQH*CIIDEG
Trigger: GCCTTCATCTATGATGCAGCAGTGCTGAACTATATG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCATCTTGATTTCTGTTaGCAGCGGAGACTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEHLDFC*QRRLKE
Trigger: CTCTTTCAGTCTCCGCTGGCAACAGAAATCAAGATG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGAAACCCTGGCCAAAGTaGATGAACATTTCTCACAAA +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMKPWPK*MNISHK
Trigger: TTTGTGAGAAATGTTCATGCACTTTGGCCAGGGTTT...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTACTATTCACTTTCAGCTaGTTCTCCTCCATGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVLFTFS*FSSMKS
Trigger: GCTCTTCATGGAGGAGAAGCAGCTGAAAGTGAATAG...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTACAGGGCCTTTGCAATTaGTTTCTCTTTGCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVQGLCN*FLFAFA
Trigger: TGCAAAGGCAAAGAGAAAGCAATTGCAAAGGCCCTG...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGACATTCTCTATGATCTaGTATTTCCATGTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVTFSMI*YFHVLF
Trigger: AAAGAGGACATGGAAATAGCAGATCATAGAGAATGT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAAAGGGATCAAAGCATTaGAAACATCCCCCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVKGSKH*KHPPLS
Trigger: TGAGAGAGGGGGATGTTTCCAATGCTTTGATCCCTT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAATGTTTCCCAAGTTCTaGCTGAGGATACACAGTGAC +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVMFPKF*LRIHSD
Trigger: GTCACTGTGTATCCTCAGCCAGAACTTGGGAAACAT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTATTTCCTATATGGCTTTaGGCTCAGAGAGCACATAAG +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLFPIWL*AQRAHK
Trigger: CTTATGTGCTCTCTGAGCCCAAAGCCATATAGGAAA...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTATTAGCTAAGCATGGTTaGTGTAGTGAGATGGCAAGA +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLLAKHG*CSEMAR
Trigger: TCTTGCCATCTCACTACACCAACCATGCTTAGCTAA...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAAGAAATACAATTGGCTaGAGAGCACCTCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVRNTIG*RAPQKR
Trigger: CCTCTTCTGAGGTGCTCTCCAGCCAATTGTATTTCT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGTGTTCAGAAGGTGACTaGAAGTATGTGTATGAAGGA +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMCSEGD*KYVYEG
Trigger: TCCTTCATACACATACTTCCAGTCACCTTCTGAACA...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATACAACGAAAGTGTTATaGGCATTCATAAAATGCCTA +
Preference number: 4 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYTTKVL*AFIKCL
Trigger: TAGGCATTTTATGAATGCCCATAACACTTTCGTTGT...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTAATTTGGACAAGTTTTaGTTCAGCCAAGTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: LCIESPKSHSLISSKPLLNLDKF*FSQVLV
Trigger: AACCAAAACTTGGCTGAACCAAAACTTGTCCAAATT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGGAGTTTAAGTTCATGTaGATCTTGCTGTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEEFKFM*ILLFRS
Trigger: GCTCCGGAACAGCAAGATCCACATGAACTTAAACTC...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGTTATCAATGTCTGTCTaGAAGAAAGCCTACGTCTCT +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMLSMSV*KKAYVS
Trigger: AGAGACGTAGGCTTTCTTCCAGACAGACATTGATAA...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAGAACCACTTTTCTGGTaGTCTCTTCCCATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVEPLFW*SLPIFL
Trigger: CAAGAAGATGGGAAGAGACCACCAGAAAAGTGGTTC...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTATCAGAACCACTTTTCTaGTGGTCTCTTCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVSEPLF*WSLPIF
Trigger: GAAGATGGGAAGAGACCACCAGAAAAGTGGTTCTGA...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp TCCTGGAAAGTTCTTGGTTCAAACTGGTTGAAACAATaGCCAACCACTGAGGACTTGTTTATGTACCTTGTT +
Preference number: 4 (lower is better)
Translates to: SWKVLGSNWLKQ*PTTEDLFMYLV
Trigger: AACAAGGTACATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAACTTTCCAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp AGGAAGTGGAGAAAGAAAGACTACCCTTTTGAGAAGTaGGGAAGTGAAAAGATAGCGATAGGACAGAAATTC +
Preference number: 4 (lower is better)
Translates to: RKWRKKDYPFEK*GSEKIAIGQKF
Trigger: GAATTTCTGTCCTATCGCTATCTTTTCACTTCCCAACTTCTCAAAAGGGTAGTCTTTCTTTCTCCACTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp GAAGACATGGTGATACCATTAAGCAAAAGGAGGAAGTaGGTGATTATGTTGGTTTGCAGCAATGGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: EDMVIPLSKRRK*VIMLVCSNGFG
Trigger: TCCAAAACCATTGCTGCAAACCAACATAATCACCAACTTCCTCCTTTTGCTTAATGGTATCACCATGTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp TTCATAAGTGAACAGGTGGGTTGTAAGAGAAGGTTGTaGCAAGATTCTCTGATCTGCGGGTGCTTAATAAAT +
Preference number: 4 (lower is better)
Translates to: FISEQVGCKRRL*QDSLICGCLIN
Trigger: ATTTATTAAGCACCCGCAGATCAGAGAATCTTGCAACAACCTTCTCTTACAACCCACCTGTTCACTTATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp TCAGAACCACTTTTCTGGTGGTCTCTTCCCATCTTCTaGGTCATTCCAGAATTCCACAAGAAATTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SEPLFWWSLPIF*VIPEFHKKFLS
Trigger: TGAAAGAAATTTCTTGTGGAATTCTGGAATGACCAAGAAGATGGGAAGAGACCACCAGAAAAGTGGTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTTTAAGCATTGCCACTaGAAGGAGTTCATACAGGAC +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEFKHCH*KEFIQD
Trigger: GTCCTGTATGAACTCCTTTCAGTGGCAATGCTTAAA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTATGTCAGTGGAAATGCTaGGATTTAAGCATTGCCACT +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVCQWKC*DLSIAT
Trigger: AGTGGCAATGCTTAAATCTCAGCATTTCCACTGACA...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGACAACAGAGGGGTCTTaGAGGAAGGAAGATATAGAA +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLETTEGS*RKEDIE
Trigger: TTCTATATCTTCCTTCCTTCAAGACCCCTCTGTTGT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGCAGGTGAGGTTAAATTaGTTGAATTTGTGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMQVRLN*LNLCSS
Trigger: TGAAGAGCACAAATTCAATCAATTTAACCTCACCTG...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAGATTTCAGAGACTATaGATCTCTTACTGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLERFQRL*ISYCKG
Trigger: CCCCTTGCAGTAAGAGATTCATAGTCTCTGAAATCT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGTGCTTCCTGCCTATGTaGAACCTTGATATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMCFLPM*NLDIFL
Trigger: AAGAAAAATATCAAGGTTTCACATAGGCAGGAAGCA...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAAGCTTCCTCTTCAACTaGAGTCAGATCATATCACTC +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVSFLFN*SQIISL
Trigger: GAGTGATATGATCTGACTTCAGTTGAAGAGGAAGCT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTATGTTCCTGCATCATTTaGACAAGTCCAAACTGGAAA +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLCSCII*TSPNWK
Trigger: TTTCCAGTTTGGACTTGTTCAAATGATGCAGGAACA...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAGTGACCCATTTCTCGTaGCTGTTACCAAGAAATAAC +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVVTHFS*LLPRNN
Trigger: GTTATTTCTTGGTAACAGGCACGAGAAATGGGTCAC...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGGGGCAGAAGCAAAGTTaGTTTCCAATCCTTTTTATT +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMGQKQS*FPILFI
Trigger: AATAAAAAGGATTGGAAAGCAACTTTGCTTCTGCCC...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACAAAGCTATTCTCAATaGTGCTGCGGATCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLQSYSQ*CCGSCL
Trigger: TAAACAAGATCCGCAGCACCATTGAGAATAGCTTTG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAGAAGTTCTATTTGTCTaGTTAACCCAAGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLEVLFV*LTQGQI
Trigger: AATCTGGCCTTGGGTTAACCAGACAAATAGAACTTC...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTACAAAGCGAGAAAGCATaGATTCTGAAGAACATGGGA +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVQSEKA*ILKNMG
Trigger: TCCCATGTTCTTCAGAATCCATGCTTTCTCGCTTTG...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAGATCAGTCCCAGCATaGATCAGGTTATTAGAGACT +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLERSVPA*IRLLET
Trigger: AGTCTCTAATAACCTGATCCATGCTGGGACTGATCT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGGGTTCAGCCAAGTTTTaGTTCTGTCAAGAATTTTCT +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMGSAKF*FCQEFS
Trigger: AGAAAATTCTTGACAGAACCAAAACTTGGCTGAACC...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGCAGAATCTTCTTGACTaGAGAATGGAAATCATTGGA +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMQNLLD*RMEIIG
Trigger: TCCAATGATTTCCATTCTCCAGTCAAGAAGATTCTG...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp TTCATGGCTAAAATGCCTAGAATTTTGGTCCATTTATaGGCCCAAATGAGATTCATGAACGTCCTTCATGAG +
Preference number: 4 (lower is better)
Translates to: FMAKMPRILVHL*AQMRFMNVLHE
Trigger: CTCATGAAGGACGTTCATGAATCTCATTTGGGCCAATAAATGGACCAAAATTCTAGGCATTTTAGCCATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAAGTCCCTGGAAATGCTaGATGCATTCATCAATATCA +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVSPWKC*MHSSIS
Trigger: TGATATTGATGAATGCATTCAGCATTTCCAGGGACT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACAAAGTATAAACTACTaGGAGTATAACTCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLQSINY*EYNSAR
Trigger: TCTGGCTGAGTTATACTCTCAGTAGTTTATACTTTG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAGTTCAGGTGAATATCTaGGAGCAAAGTATAAACTAC +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLVQVNI*EQSINY
Trigger: GTAGTTTATACTTTGCTCTCAGATATTCACCTGAAC...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAAGTTGTCACAAGTTTTaGCCTACCTTGCCAATAATA +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLSCHKF*PTLPII
Trigger: TATTATTGGCAAGGTAGGGCAAAACTTGTGACAACT...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTATCTCTGATCTGCGGGTaGTTAATAAATAATTCACCA +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLSLICG*LINNSP
Trigger: TGGTGAATTATTTATTAAGCACCCGCAGATCAGAGA...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGACCTATTTAGCATATTaGACTGGTAGATTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMTYLAY*TGRFSS
Trigger: AGAAGAGAATCTACCAGTCCAATATGCTAAATAGGT...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCAGTCACGCCAAGAATaGGAAGTTAATTTGACCTTA +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEQSRQE*EVNLTL
Trigger: TAAGGTCAAATTAACTTCCCATTCTTGGCGTGACTG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGATATGTCACCTTTCCTaGGATTACTTTCATTCGAAT +
Preference number: 4 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMICHLS*DYFHSN
Trigger: ATTCGAATGAAAGTAATCCCAGGAAAGGTGACATAT...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTATTCATAGATAAGATCTaGCTAAATCAGCTGCCTAGA +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLFIDKI*LNQLPR
Trigger: TCTAGGCAGCTGATTTAGCCAGATCTTATCTATGAA...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAGTTTCATTAATCTATaGCACTTTGTCCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLESFINL*HFVPPL
Trigger: GAGAGGAGGGACAAAGTGCCATAGATTAATGAAACT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACTAGTTCCAGTATCATaGCTTCAAATACCAACCAAA +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLLVPVS*LQIPTK
Trigger: TTTGGTTGGTATTTGAAGCCATGATACTGGAACTAG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAACAATACATTATCCTaGGAGATTCCTGGAACTAGG +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLENNTLS*EIPGTR
Trigger: CCTAGTTCCAGGAATCTCCCAGGATAATGTATTGTT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTATCTGGGAAGAATCTaGCTTTATGTTAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEYLGRI*LYVRAC
Trigger: GCAAGCTCTAACATAAAGCCAGATTCTTCCCAGATA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp ATAGCGATAGGACAGAAATTCAAGAGTCAAATTGGATaGAGAGATTTGTCTTTAGAGATAGTTGTAGGACGG +
Preference number: 4 (lower is better)
Translates to: IAIGQKFKSQIG*RDLSLEIVVGR
Trigger: CCGTCCTACAACTATCTCTAAAGACAAATCTCTCAATCCAATTTGACTCTTGAATTTCTGTCCTATCGCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
3UTR CAA 72 bp AACTTATGCCTTAATCCTAGAATCAGGCTTGTATGTTaGAACTTAATTAGACAGAGGTGCCCAGAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: NLCLNPRIRLVC*NLIRQRCPEKD
Trigger: ATCCTTTTCTGGGCACCTCTGTCTAATTAAGTTCAAACATACAAGCCTGATTCTAGGATTAAGGCATAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAAAGAATCATGGCTGTaGAAATTCGGTTTCCCTTTA +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEKESWL*KFGFPL
Trigger: TAAAGGGAAACCGAATTTTCACAGCCATGATTCTTT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR TCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGATTATATTCAAAGCATaGAGCAGCTCCAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEIIFKA*SSSRNS
Trigger: TGAGTTTCTGGAGCTGCTTCATGCTTTGAATATAAT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTTCATGACTCTTCTTTaGAAGGCAAAAGGATATGCA +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEFMTLL*KAKGYA
Trigger: TGCATATCCTTTTGCCTTGCAAAGAAGAGTCATGAA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACAAGATTCTCTGATCTaGGGGTGCTTAATAAATAAT +
Preference number: 4 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLQDSLI*GCLINN
Trigger: ATTATTTATTAAGCACCCGCAGATCAGAGAATCTTG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTTGCAGGTAGATGTGTaGAAGGAATTAAAGATGCAA +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLELQVDV*KELKMQ
Trigger: TTGCATCTTTAATTCCTTCCACACATCTACCTGCAA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTATCCTCCCCCAAAACCTaGATATTTATTCTAAGTGTT +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVSSPKT*IFILSV
Trigger: AACACTTAGAATAAATATCCAGGTTTTGGGGGAGGA...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAAGCAAAATCCAACTGTaGGAACCTCTAAAGGATAAA +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVSKIQL*EPLKDK
Trigger: TTTATCCTTTAGAGGTTCCCACAGTTGGATTTTGCT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGAGTTCATGGCTAAAATaGCTAGAATTTTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLESSWLK*LEFWSI
Trigger: AATGGACCAAAATTCTAGGCATTTTAGCCATGAACT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTTAGCTTTCCTGGTTTaGTTAGAACATATGATCTAC +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLELAFLV*LEHMIY
Trigger: GTAGATCATATGTTCTAAGCAAACCAGGAAAGCTAA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR GCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGGGAATTTTATTTTTCTaGTCTCCTTGCCAAACTACT +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEGILFF*SPCQTT
Trigger: AGTAGTTTGGCAAGGAGAGCAGAAAAATAAAATTCC...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTTTAATGGAATCATTTaGGATTTTCCCCTCAATCAC +
Preference number: 4 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEFNGII*DFPLNH
Trigger: GTGATTGAGGGGAAAATCCCAAATGATTCCATTAAA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CCA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAGACATGAACAGTTCATaGCTAAAATGCCTAGAATTT +
Preference number: 4 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVDMNSS*LKCLEF
Trigger: AAATTCTAGGCATTTTAGCCATGAACTGTTCATGTC...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 90 bp GGGCTGGCACGGCCCCATGAAGGGCCGAGACCACCGGCTTGTTGGTaGCAAGGGCCCGGAAGTCCGGCCTGGCTTTCGACGCCCCCGCCA +
Preference number: 5 (lower is better)
Translates to: GLARPHEGPRPPACW*QGPGSPAWLSTPPP
Trigger: TGGCGGGGGCGTCGAAAGCCAGGCCGGACTTCCGGGCCCTTGTCACCAACAAGCCGGTGGTCTCGGCCCTTCATGGGGCCGTGCCAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 90 bp TCTGTGTGGAGAAGCTGGGGGCCGGCTCCGTCCCTCGGTGGAGCATaGTCATTCCCAAAGCGTCCCCTTCCGGCTCCGAGCGCCTCCGCG +
Preference number: 5 (lower is better)
Translates to: SVWRSWGPAPSLGGA*SFPKRPLPAPSASA
Trigger: CGCGGAGGCGCTCGGAGCCGGAAGGGGACGCTTTGGGAATGACCATGCTCCACCGAGGGACGGAGCCGGCCCCCAGCTTCTCCACACAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS GCA 90 bp GTCATTCCCAAAGCGTCCCCTTCCGGCTCCGAGCGCCTCCGCGGTTaGAGTCTGCGGAGAGGGGTGGCCGGTGGCTGGGAATGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: VIPKASPSGSERLRG*SLRRGVAGGWEWRV
Trigger: AACCCTCCATTCCCAGCCACCGGCCACCCCTCTCCGCAGACTGCAACCGCGGAGGCGCTCGGAGCCGGAAGGGGACGCTTTGGGAATGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 90 bp AGGAGGCTCTGTGTGGAGAAGCTGGGGGCCGGCTCCGTCCCTCGGTaGAGCATGGTCATTCCCAAAGCGTCCCCTTCCGGCTCCGAGCGC +
Preference number: 5 (lower is better)
Translates to: RRLCVEKLGAGSVPR*SMVIPKASPSGSER
Trigger: GCGCTCGGAGCCGGAAGGGGACGCTTTGGGAATGACCATGCTCCACCGAGGGACGGAGCCGGCCCCCAGCTTCTCCACACAGAGCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS TCA 90 bp ACCCCGCTGACCACGCCGTGTTTGTCGCCCGTCCCGTGCTTGATGTaGGACCTGTTGGTACAGGGCCCTCCTCCGCTGACGGAGTCGCGC +
Preference number: 5 (lower is better)
Translates to: TPLTTPCLSPVPCLM*DLLVQGPPPLTESR
Trigger: GCGCGACTCCGTCAGCGGAGGAGGGCCCTGTACCAACAGGTCTCACATCAAGCACGGGACGGGCGACAAACACGGCGTGGTCAGCGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS GCA 90 bp GGACCGGTCCTCCCACTCCACGTTGGTCAGGTTCTTCTCCCAAGGTaGAGGTACCCCGCTGACCACGCCGTGTTTGTCGCCCGTCCCGTG +
Preference number: 5 (lower is better)
Translates to: GPVLPLHVGQVLLPR*RYPADHAVFVARPV
Trigger: CACGGGACGGGCGACAAACACGGCGTGGTCAGCGGGGTACCTGCACCTTGGGAGAAGAACCTGACCAACGTGGAGTGGGAGGACCGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS GCA 90 bp GACCCGTCACCGTCGTGGAGTAGTTGTGCAGCTTGGAGGGACAGCTaGGGCAGAAGTTGCCCCCGGACCGGTCCTCCCACTCCACGTTGG +
Preference number: 5 (lower is better)
Translates to: DPSPSWSSCAAWRDS*GRSCPRTGPPTPRW
Trigger: CCAACGTGGAGTGGGAGGACCGGTCCGGGGGCAACTTCTGCCGCAGCTGTCCCTCCAAGCTGCACAACTACTCCACGACGGTGACGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 90 bp CTTCCGGCTCCGAGCGCCTCCGCGGTTGCAGTCTGCGGAGAGGGGTaGCCGGTGGCTGGGAATGGAGGGTTTTCCTTTCCTGCAAAGCAG +
Preference number: 5 (lower is better)
Translates to: LPAPSASAVAVCGEG*PVAGNGGFSFPAKQ
Trigger: CTGCTTTGCAGGAAAGGAAAACCCTCCATTCCCAGCCACCGGCCACCCCTCTCCGCAGACTGCAACCGCGGAGGCGCTCGGAGCCGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 90 bp TGCCCGAGTTCTGACCCGTCACCGTCGTGGAGTAGTTGTGCAGCTTaGAGGGACAGCTGCGGCAGAAGTTGCCCCCGGACCGGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: CPSSDPSPSWSSCAA*RDSCGRSCPRTGPP
Trigger: GGGAGGACCGGTCCGGGGGCAACTTCTGCCGCAGCTGTCCCTCCAAGCTGCACAACTACTCCACGACGGTGACGGGTCAGAACTCGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 90 bp AGGAGGCTCTGTGTGGAGAAGCTGGGGGCCGGCTCCGTCCCTCGGTaGAGCATGGTCATTCCCAAAGCGTCCCCTTCCTCGCACACCCTG +
Preference number: 5 (lower is better)
Translates to: RRLCVEKLGAGSVPR*SMVIPKASPSSHTL
Trigger: CAGGGTGTGCGAGGAAGGGGACGCTTTGGGAATGACCATGCTCCACCGAGGGACGGAGCCGGCCCCCAGCTTCTCCACACAGAGCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627535.2
CDS TCA 90 bp GGAAGTCCGGCCTGGCTTTCGACGCCCCCGCCACCGTGGGCTGCCTaGAGAAGTAGGATTTGCTGCCATGGAGCAAGCACTGGTCGTCCC +
Preference number: 5 (lower is better)
Translates to: GSPAWLSTPPPPWAA*RSRICCHGASTGRP
Trigger: GGGACGACCAGTGCTTGCTCCATGGCAGCAAATCCTACTTCTTCAGGCAGCCCACGGTGGCGGGGGCGTCGAAAGCCAGGCCGGACTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 90 bp ACCGGATGCACGCCTGCCTGCCCGAGTTCTGACCCGTCACCGTCGTaGAGTAGTTGTGCAGCTTGGAGGGACAGCTGCGGCAGAAGTTGC +
Preference number: 5 (lower is better)
Translates to: TGCTPACPSSDPSPS*SSCAAWRDSCGRSC
Trigger: GCAACTTCTGCCGCAGCTGTCCCTCCAAGCTGCACAACTACTCCACGACGGTGACGGGTCAGAACTCGGGCAGGCAGGCGTGCATCCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 90 bp TCTGTGTGGAGAAGCTGGGGGCCGGCTCCGTCCCTCGGTGGAGCATaGTCATTCCCAAAGCGTCCCCTTCTTAACTCGCCAGCGAGTGCG +
Preference number: 5 (lower is better)
Translates to: SVWRSWGPAPSLGGA*SFPKRPLLNSPASA
Trigger: CGCACTCGCTGGCGAGTTAAGAAGGGGACGCTTTGGGAATGACCATGCTCCACCGAGGGACGGAGCCGGCCCCCAGCTTCTCCACACAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681855.1
CDS TCA 90 bp CGCCAGCTGACATCTCAAACATGTGGGCGTAGGGGCTCCCATCCATaGATCGGCCCTTGTCTTTCAGGCTTACGCTGCGCGGGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: RQLTSQTCGRRGSHP*IGPCLSGLRCAGPG
Trigger: CCCTGGCCCCGCGCAGCGTAAGCCTGAAAGACAAGGGCCGATTCATGGATGGGAGCCCCTACGCCCACATGTTTGAGATGTCAGCTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 90 bp GCATGTACCCGCCGCCGGGGTTGTTGTGGTGGTGATGTCCGGCAGTaGGCACTGAGGACTTGTTGTTGGCAAAGGTGCTCTCGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: ACTRRRGCCGGDVRQ*ALRTCCWQRCSRQL
Trigger: CAGCTGGCGAGAGCACCTTTGCCAACAACAAGTCCTCAGTGCCCACTGCCGGACATCACCACCACAACAACCCCGGCGGCGGGTACATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 90 bp CTTGGAATTAGTCGGGCTCTGAGGGTACTTAGTGGTGGAGGCGTTTaGCGTCACCGCCACTGGGGCAGCCGGCTGGTCCAGTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LGISRALRVLSGGGV*RHRHWGSRLVQFLQ
Trigger: CTGCAGGAACTGGACCAGCCGGCTGCCCCAGTGGCGGTGACGTCAAACGCCTCCACCACTAAGTACCCTCAGAGCCCGACTAATTCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 90 bp TTCCCTATACAGATGTCCTTCTGGAAACGGGCTGGCACGGCCCCATaGAGGGCCGAGACCACCGGCTTGTTGGTGACAAGGGCCCGGAAG +
Preference number: 5 (lower is better)
Translates to: FPIQMSFWKRAGTAP*RAETTGLLVTRARK
Trigger: CTTCCGGGCCCTTGTCACCAACAAGCCGGTGGTCTCGGCCCTTCATGGGGCCGTGCCAGCCCGTTTCCAGAAGGACATCTGTATAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS GCA 90 bp TCGTGGAGTAGTTGTGCAGCTTGGAGGGACAGCTGCGGCAGAAGTTaGCCCCGGACCGGTCCTCCCACTCCACGTTGGTCAGGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: SWSSCAAWRDSCGRS*PRTGPPTPRWSGSS
Trigger: AGAAGAACCTGACCAACGTGGAGTGGGAGGACCGGTCCGGGGGCAACTTCTGCCGCAGCTGTCCCTCCAAGCTGCACAACTACTCCACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS GCA 90 bp GGTTGCCTGCTTTCTTGCAAGCCTCACACCGGATGCACGCCTGCCTaGCCGAGTTCTGACCCGTCACCGTCGTGGAGTAGTTGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: GCLLSCKPHTGCTPA*PSSDPSPSWSSCAA
Trigger: AGCTGCACAACTACTCCACGACGGTGACGGGTCAGAACTCGGGCAGGCAGGCGTGCATCCGGTGTGAGGCTTGCAAGAAAGCAGGCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 90 bp GTCCAGGGGCTTCTTGCTGATGGACCTGGACTGGGTGGTGAAGGGTaGGTTGTCACAGTCGTAGAGCCCATCGATGGAGCTGGCACTGCC +
Preference number: 5 (lower is better)
Translates to: VQGLLADGPGLGGEG*VVTVVEPIDGAGTA
Trigger: GGCAGTGCCAGCTCCATCGATGGGCTCTACGACTGTGACAACCCACCCTTCACCACCCAGTCCAGGTCCATCAGCAAGAAGCCCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 90 bp GGGGTTGGACTGGTTCCCTATACAGATGTCCTTCTGGAAACGGGCTaGCACGGCCCCATGAAGGGCCGAGACCACCGGCTTGTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: GVGLVPYTDVLLETG*HGPMKGRDHRLVGD
Trigger: GTCACCAACAAGCCGGTGGTCTCGGCCCTTCATGGGGCCGTGCCAGCCCGTTTCCAGAAGGACATCTGTATAGGGAACCAGTCCAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 90 bp TGCGGCGGTGCTCTGAGATGTCATAGACGGATGACTCCCGTCGGATaGAGTCCAGGGCGCTCTGCGGTGAGCCATTCACACCAGACAGGT +
Preference number: 5 (lower is better)
Translates to: CGGALRCHRRMTPVG*SPGRSAVSHSHQTG
Trigger: ACCTGTCTGGTGTGAATGGCTCACCGCAGAGCGCCCTGGACTTCATCCGACGGGAGTCATCCGTCTATGACATCTCAGAGCACCGCCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 90 bp AGCGACTTGCTGAGCATGTACCCGCCGCCGGGGTTGTTGTGGTGGTaGTGTCCGGCAGTGGGCACTGAGGACTTGTTGTTGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: SDLLSMYPPPGLLWW*CPAVGTEDLLLAKV
Trigger: CACCTTTGCCAACAACAAGTCCTCAGTGCCCACTGCCGGACATCACCACCACAACAACCCCGGCGGCGGGTACATGCTCAGCAAGTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS GCA 90 bp CGTGCGCAGCAGGCGCAGGATGTTGGAGTGTGTGTTGTTCATGGTTaGGGTGGGGGAGTTCATTACAGACTGGCGCTCCTCGATCGCCAC +
Preference number: 5 (lower is better)
Translates to: RAQQAQDVGVCVVHG*GGGVHYRLALLDRH
Trigger: GTGGCGATCGAGGAGCGCCAGTCTGTAATGAACTCCCCCACCGCAACCATGAACAACACACACTCCAACATCCTGCGCCTGCTGCGCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS GCA 90 bp GCGTTTGACGTCACCGCCACTGGGGCAGCCGGCTGGTCCAGTTCCTaGAGGGAGTTGTCCTCACTGATGTCATACAGGTTGCCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: AFDVTATGAAGWSSS*RELSSLMSYRLPAF
Trigger: GAAAGCAGGCAACCTGTATGACATCAGTGAGGACAACTCCCTGCAGGAACTGGACCAGCCGGCTGCCCCAGTGGCGGTGACGTCAAACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 90 bp TGGGGAACTCCGCAGGCACTGTGTCTGTATCCCCTGCCACCAGACTaGGCACGATCCACGTGTAGCCATAGCCAGTCAGCCCTACTGAGT +
Preference number: 5 (lower is better)
Translates to: WGTPQALCLYPLPPD*ARSTCSHSQSALLS
Trigger: ACTCAGTAGGGCTGACTGGCTATGGCTACACGTGGATCGTGCCCAGTCTGGTGGCAGGGGATACAGACACAGTGCCTGCGGAGTTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 90 bp TGGCCGTGCGCAGCAGGCGCAGGATGTTGGAGTGTGTGTTGTTCATaGTTGCGGTGGGGGAGTTCATTACAGACTGGCGCTCCTCGATCG +
Preference number: 5 (lower is better)
Translates to: WPCAAGAGCWSVCCS*LRWGSSLQTGAPRS
Trigger: CGATCGAGGAGCGCCAGTCTGTAATGAACTCCCCCACCGCAACCATGAACAACACACACTCCAACATCCTGCGCCTGCTGCGCACGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 90 bp TTAGTGGTGGAGGCGTTTGACGTCACCGCCACTGGGGCAGCCGGCTaGTCCAGTTCCTGCAGGGAGTTGTCCTCACTGATGTCATACAGG +
Preference number: 5 (lower is better)
Translates to: LVVEAFDVTATGAAG*SSSCRELSSLMSYR
Trigger: CCTGTATGACATCAGTGAGGACAACTCCCTGCAGGAACTGGACCAGCCGGCTGCCCCAGTGGCGGTGACGTCAAACGCCTCCACCACTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS GCA 90 bp GGTGATGTCCGGCAGTGGGCACTGAGGACTTGTTGTTGGCAAAGGTaGTCTCGCCAGCTGACATCTCAAACATGTGGGCGTAGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: GDVRQWALRTCCWQR*SRQLTSQTCGRRGS
Trigger: GGAGCCCCTACGCCCACATGTTTGAGATGTCAGCTGGCGAGAGCACCTTTGCCAACAACAAGTCCTCAGTGCCCACTGCCGGACATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 90 bp TTTGGTTTTTGGAGCGTTAGTGGAGGAGGCTCTGTGTGGAGAAGCTaGGGGCCGGCTCCGTCCCTCGGTGGAGCATGGTCATTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: FGFWSVSGGGSVWRS*GPAPSLGGAWSFPK
Trigger: CTTTGGGAATGACCATGCTCCACCGAGGGACGGAGCCGGCCCCCAGCTTCTCCACACAGAGCCTCCTCCACTAACGCTCCAAAAACCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000609686.4
ENST00000627535.2
ENST00000630791.2
ENST00000681855.1
CDS CCA 90 bp CTCTGCTGCCTGACACGGCCAGGACGGCCAACACCAACCAGAACTTaGGAGAACAGCACTCCGCTCTGGGCTTCATCTTCAACTCGTCGA +
Preference number: 5 (lower is better)
Translates to: LCCLTRPGRPTPTRT*ENSTPLWASSSTRR
Trigger: TCGACGAGTTGAAGATGAAGCCCAGAGCGGAGTGCTGTTCTCCCAAGTTCTGGTTGGTGTTGGCCGTCCTGGCCGTGTCAGGCAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000609686.4
ENST00000627535.2
ENST00000630791.2
CDS CCA 90 bp TCCACCCGGGGTACCACGGAGAGATGGTGGAAATCATCTTTCTCGTaGGCATCCTTGATGGCCACCTCGTCGGAAGTGCCCACGAGGATG +
Preference number: 5 (lower is better)
Translates to: STRGTTERWWKSSFS*ASLMATSSEVPTRM
Trigger: CATCCTCGTGGGCACTTCCGACGAGGTGGCCATCAAGGATGCCCACGAGAAAGATGATTTCCACCATCTCTCCGTGGTACCCCGGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 90 bp GCAGCAGGCGCAGGATGTTGGAGTGTGTGTTGTTCATGGTTGCGGTaGGGGAGTTCATTACAGACTGGCGCTCCTCGATCGCCACCCCAT +
Preference number: 5 (lower is better)
Translates to: AAGAGCWSVCCSWLR*GSSLQTGAPRSPPH
Trigger: ATGGGGTGGCGATCGAGGAGCGCCAGTCTGTAATGAACTCCCCCACCGCAACCATGAACAACACACACTCCAACATCCTGCGCCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 90 bp CTTGGCGGCATTGCCCTCGATGTTCCCATAGGTGACGGTGTGGGTTaGGATGTCAGAGACATCGGAGCGGATCAAGTCGTCGTGGCCACT +
Preference number: 5 (lower is better)
Translates to: LGGIALDVPIGDGVG*DVRDIGADQVVVAT
Trigger: AGTGGCCACGACGACTTGATCCGCTCCGATGTCTCTGACATCTCAACCCACACCGTCACCTATGGGAACATCGAGGGCAATGCCGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS GCA 90 bp CAGTTCCTGCAGGGAGTTGTCCTCACTGATGTCATACAGGTTGCCTaGTTTCTTGCAAGCCTCACACCGGATGCACGCCTGCCTGCCCGA +
Preference number: 5 (lower is better)
Translates to: QFLQGVVLTDVIQVA*FLASLTPDARLPAR
Trigger: TCGGGCAGGCAGGCGTGCATCCGGTGTGAGGCTTGCAAGAAAGCAGGCAACCTGTATGACATCAGTGAGGACAACTCCCTGCAGGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCGAGCGCCTCCGCGGTaGCAGTCTGCGGAGAGGGGT +
Preference number: 5 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSRAPPR*QSAERG
Trigger: ACCCCTCTCCGCAGACTGCAACCGCGGAGGCGCTCG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 90 bp GCTGCTTACGCCTCTTGGCGGCATTGCCCTCGATGTTCCCATAGGTaGCGGTGTGGGTTGAGATGTCAGAGACATCGGAGCGGATCAAGT +
Preference number: 5 (lower is better)
Translates to: AAYASWRHCPRCSHR*RCGLRCQRHRSGSS
Trigger: ACTTGATCCGCTCCGATGTCTCTGACATCTCAACCCACACCGTCACCTATGGGAACATCGAGGGCAATGCCGCCAAGAGGCGTAAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 90 bp CCCAGGATGGGGGTGAGAGTCTGTGCTGAAATGAAATCGAGGATCTaGGCGATGGCTTCCTGGTCTGTGTCATCAGCAAACACCACCCCC +
Preference number: 5 (lower is better)
Translates to: PRMGVRVCAEMKSRI*AMASWSVSSANTTP
Trigger: GGGGGTGGTGTTTGCTGATGACACAGACCAGGAAGCCATCGCCCAGATCCTCGATTTCATTTCAGCACAGACTCTCACCCCCATCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS TCA 90 bp TCCATCTCTCACTCTGGCGGGGAGGCCATAGTCCCATTCATCATATaGTACAGAGATGAGCCCAGTGGGGAACTCCGCAGGCACTGTGTC +
Preference number: 5 (lower is better)
Translates to: SISHSGGEAIVPFII*YRDEPSGELRRHCV
Trigger: GACACAGTGCCTGCGGAGTTCCCCACTGGGCTCATCTCTGTATCATATGATGAATGGGACTATGGCCTCCCCGCCAGAGTGAGAGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS TCA 90 bp TCTCCTCACAGGGCGGGTTGTTGTAGGATTTGCAGTCAGAATGCGTaGAGCTGCGGCGGTGCTCTGAGATGTCATAGACGGATGACTCCC +
Preference number: 5 (lower is better)
Translates to: SPHRAGCCRICSQNA*SCGGALRCHRRMTP
Trigger: GGGAGTCATCCGTCTATGACATCTCAGAGCACCGCCGCAGCTTCACGCATTCTGACTGCAAATCCTACAACAACCCGCCCTGTGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 90 bp AGTTTGTTCCGGTTCTTCTTCTGGGCCTTGGAATTAGTCGGGCTCTaGGGGTACTTAGTGGTGGAGGCGTTTGACGTCACCGCCACTGGG +
Preference number: 5 (lower is better)
Translates to: SLFRFFFWALELVGL*GYLVVEAFDVTATG
Trigger: CCCAGTGGCGGTGACGTCAAACGCCTCCACCACTAAGTACCCTCAGAGCCCGACTAATTCCAAGGCCCAGAAGAAGAACCGGAACAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 90 bp TTCGGACGCCAGCACTACTGGATGGTGGTGATCAAGAATCACCCTTaGCGAGCACTCTCGATAGAGCGAAGCCCCGAGATTTCCTCGCAC +
Preference number: 5 (lower is better)
Translates to: FGRQHYWMVVIKNHP*RALSIERSPEISSH
Trigger: GTGCGAGGAAATCTCGGGGCTTCGCTCTATCGAGAGTGCTCGTCAAGGGTGATTCTTGATCACCACCATCCAGTAGTGCTGGCGTCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630791.2
CDS CCA 90 bp GGACGGCCAACACCAACCAGAACTTGGGAGAACAGCACTCCGCTCTaGGCTTCATCTTCAACTCGTCGACTCCCTTGGTTTGTAGAAGCC +
Preference number: 5 (lower is better)
Translates to: GRPTPTRTWENSTPL*ASSSTRRLPWFVEA
Trigger: GGCTTCTACAAACCAAGGGAGTCGACGAGTTGAAGATGAAGCCCAGAGCGGAGTGCTGTTCTCCCAAGTTCTGGTTGGTGTTGGCCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000609686.4
ENST00000627535.2
ENST00000630791.2
CDS CCA 90 bp TCATTCATGGCTACCAGTTCCACCCGGGGTACCACGGAGAGATGGTaGAAATCATCTTTCTCGTGGGCATCCTTGATGGCCACCTCGTCG +
Preference number: 5 (lower is better)
Translates to: SFMATSSTRGTTERW*KSSFSWASLMATSS
Trigger: CGACGAGGTGGCCATCAAGGATGCCCACGAGAAAGATGATTTCCACCATCTCTCCGTGGTACCCCGGGTGGAACTGGTAGCCATGAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 90 bp GTCTCATTCATGGCTACCAGTTCCACCCGGGGTACCACGGAGAGATaGTGGAAATCATCTTTCTCGTGGGCATCCTTGATGGCCACCTCG +
Preference number: 5 (lower is better)
Translates to: VSFMATSSTRGTTER*WKSSFSWASLMATS
Trigger: CGAGGTGGCCATCAAGGATGCCCACGAGAAAGATGATTTCCACCATCTCTCCGTGGTACCCCGGGTGGAACTGGTAGCCATGAATGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 90 bp CTTCCGGTCAGACATGAGATCACAGATGCGGGTGATGATGCTCTTTaGGTCGGTCTCATTCATGGCTACCAGTTCCACCCGGGGTACCAC +
Preference number: 5 (lower is better)
Translates to: LPVRHEITDAGDDAL*VGLIHGYQFHPGYH
Trigger: GTGGTACCCCGGGTGGAACTGGTAGCCATGAATGAGACCGACCCAAAGAGCATCATCACCCGCATCTGTGATCTCATGTCTGACCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 90 bp TGGGCGATGGCTTCCTGGTCTGTGTCATCAGCAAACACCACCCCCTaGATCTTCCGGTCAGACATGAGATCACAGATGCGGGTGATGATG +
Preference number: 5 (lower is better)
Translates to: WAMASWSVSSANTTP*IFRSDMRSQMRVMM
Trigger: CATCATCACCCGCATCTGTGATCTCATGTCTGACCGGAAGATCCAGGGGGTGGTGTTTGCTGATGACACAGACCAGGAAGCCATCGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 90 bp TGTTGTGGTGGTGATGTCCGGCAGTGGGCACTGAGGACTTGTTGTTaGCAAAGGTGCTCTCGCCAGCTGACATCTCAAACATGTGGGCGT +
Preference number: 5 (lower is better)
Translates to: CCGGDVRQWALRTCC*QRCSRQLTSQTCGR
Trigger: ACGCCCACATGTTTGAGATGTCAGCTGGCGAGAGCACCTTTGCCAACAACAAGTCCTCAGTGCCCACTGCCGGACATCACCACCACAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCAGCTGCGGCAGAAGTaGCCCCCGGACCGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVQLRQK*PPDRSS
Trigger: GGAGGACCGGTCCGGGGGCAACTTCTGCCGCAGCTG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGAGGTTAGCCATGTTCTaGGCCGTGCGCAGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: FTEKAGREKERKHYRLPERLAMF*AVRSRR
Trigger: GCGCCTGCTGCGCACGGCCAAGAACATGGCTAACCT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTAACTCCCTGCGGGACTaGGCCGAGGCAGGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLNSLRD*AEAGRF
Trigger: GAAGCGGCCTGCCTCGGCCAAGTCCCGCAGGGAGTT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTCTCCTCCTCCCTCATaGGCCTCCCGGCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSSPPPS*ASRLFL
Trigger: GAGGAAGAGCCGGGAGGCCAATGAGGGAGGAGGAGA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 90 bp CAGACTGGGCACGATCCACGTGTAGCCATAGCCAGTCAGCCCTACTaGGTTGGCCACTTCAAAGATGTAGGTGGCTTCTTCCTTGGTACA +
Preference number: 5 (lower is better)
Translates to: QTGHDPRVAIASQPY*VGHFKDVGGFFLGT
Trigger: TGTACCAAGGAAGAAGCCACCTACATCTTTGAAGTGGCCAACTCAGTAGGGCTGACTGGCTATGGCTACACGTGGATCGTGCCCAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 90 bp AGAGTCTGTGCTGAAATGAAATCGAGGATCTGGGCGATGGCTTCCTaGTCTGTGTCATCAGCAAACACCACCCCCTGGATCTTCCGGTCA +
Preference number: 5 (lower is better)
Translates to: RVCAEMKSRIWAMAS*SVSSANTTPWIFRS
Trigger: TGACCGGAAGATCCAGGGGGTGGTGTTTGCTGATGACACAGACCAGGAAGCCATCGCCCAGATCCTCGATTTCATTTCAGCACAGACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS-3UTR CAA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCATGTCCAGGGGCTTCTaGCTGATGGACCTGGACTGG +
Preference number: 5 (lower is better)
Translates to: TVELTHRINSPTASFRTGMSRGF*LMDLDW
Trigger: CCAGTCCAGGTCCATCAGCAAGAAGCCCCTGGACAT...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGGCCGAGACCACCGGCTaGTTGGTGACAAGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGAETTG*LVTRAR
Trigger: CCGGGCCCTTGTCACCAACAAGCCGGTGGTCTCGGC...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS GCA 90 bp GGACCTCCTCTAGCTCCCAGCCCACAAAGCTATTCTCAATGGTGCTaGGGATCTTGTTTACAAAGTCCTGGTAGCCAGGGAAATAGGTGG +
Preference number: 5 (lower is better)
Translates to: GPPLAPSPQSYSQWC*GSCLQSPGSQGNRW
Trigger: CCACCTATTTCCCTGGCTACCAGGACTTTGTAAACAAGATCCGCAGCACCATTGAGAATAGCTTTGTGGGCTGGGAGCTAGAGGAGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS GCA 90 bp GGAGGACCTCCTCTAGCTCCCAGCCCACAAAGCTATTCTCAATGGTaGTGCGGATCTTGTTTACAAAGTCCTGGTAGCCAGGGAAATAGG +
Preference number: 5 (lower is better)
Translates to: GGPPLAPSPQSYSQW*CGSCLQSPGSQGNR
Trigger: CCTATTTCCCTGGCTACCAGGACTTTGTAAACAAGATCCGCAGCACCATTGAGAATAGCTTTGTGGGCTGGGAGCTAGAGGAGGTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 90 bp CAGGGTCACAATGCTCAGATGGTCATCCTCCTGCTCTTCAGTCTCTaGACACATTCGGGGCCACACATAGTACTTCATCTGCAGGGACTT +
Preference number: 5 (lower is better)
Translates to: QGHNAQMVILLLFSL*THSGPHIVLHLQGL
Trigger: AAGTCCCTGCAGATGAAGTACTATGTGTGGCCCCGAATGTGTCCAGAGACTGAAGAGCAGGAGGATGACCATCTGAGCATTGTGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTTCTCGTGGGCATCCTaGATGGCCACCTCGTCGGAA +
Preference number: 5 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSFSWAS*MATSSE
Trigger: TTCCGACGAGGTGGCCATCAAGGATGCCCACGAGAA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTTGCTGCTTACGCCTCTaGGCGGCATTGCCCTCGATG +
Preference number: 5 (lower is better)
Translates to: FATQPHSGCISCFHHHPLCCLRL*AALPSM
Trigger: CATCGAGGGCAATGCCGCCAAGAGGCGTAAGCAGCA...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATGAGACCACCGGCTTGTaGGTGACAAGGGCCCGGAAG +
Preference number: 5 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYETTGL*VTRARK
Trigger: CTTCCGGGCCCTTGTCACCAACAAGCCGGTGGTCTC...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGTAAGGGGCTCTCCCTaGAGGCTGCCCTGCTCACTG +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLVRGSP*RLPCSL
Trigger: CAGTGAGCAGGGCAGCCTCAAGGGAGAGCCCCTTAC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCCCTTCTTGCCCCTCATaGCCATTCCAGACCATCCTC +
Preference number: 5 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTPSCPS*PFQTIL
Trigger: GAGGATGGTCTGGAATGGCAATGAGGGGCAAGAAGG...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCCCTGCCCCGGGCACTaGCAGCATCACCACCTCAAT +
Preference number: 5 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYPCPGH*QHHHLN
Trigger: ATTGAGGTGGTGATGCTGCAAGTGCCCGGGGCAGGG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 90 bp ATGGAGGATTCATCCTTATCTGCCATTATCATAGAGGAGCCCCCGTaGATGCCCAGGATGGGGGTGAGAGTCTGTGCTGAAATGAAATCG +
Preference number: 5 (lower is better)
Translates to: MEDSSLSAIIIEEPP*MPRMGVRVCAEMKS
Trigger: CGATTTCATTTCAGCACAGACTCTCACCCCCATCCTGGGCATCCACGGGGGCTCCTCTATGATAATGGCAGATAAGGATGAATCCTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 90 bp GTAGGAGGACCTCCTCTAGCTCCCAGCCCACAAAGCTATTCTCAATaGTGCTGCGGATCTTGTTTACAAAGTCCTGGTAGCCAGGGAAAT +
Preference number: 5 (lower is better)
Translates to: VGGPPLAPSPQSYSQ*CCGSCLQSPGSQGN
Trigger: ATTTCCCTGGCTACCAGGACTTTGTAAACAAGATCCGCAGCACCATTGAGAATAGCTTTGTGGGCTGGGAGCTAGAGGAGGTCCTCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 90 bp TGGGCACGATCCACGTGTAGCCATAGCCAGTCAGCCCTACTGAGTTaGCCACTTCAAAGATGTAGGTGGCTTCTTCCTTGGTACAGTAAA +
Preference number: 5 (lower is better)
Translates to: WARSTCSHSQSALLS*PLQRCRWLLPWYSK
Trigger: TTTACTGTACCAAGGAAGAAGCCACCTACATCTTTGAAGTGGCCAACTCAGTAGGGCTGACTGGCTATGGCTACACGTGGATCGTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS-3UTR CAA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCAACACCAACCAGAACTaGGGAGAACAGCACTCCGCT +
Preference number: 5 (lower is better)
Translates to: TVELTHRINSPTASFRTGNTNQN*GEQHSA
Trigger: AGCGGAGTGCTGTTCTCCCAAGTTCTGGTTGGTGTT...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGCTGACCACGCCGTGTTaGTCGCCCGTCCCGTGCTTG +
Preference number: 5 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMLTTPC*SPVPCL
Trigger: CAAGCACGGGACGGGCGACAAACACGGCGTGGTCAG...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGGCACTGAGGACTTGTaGTTGGCAAAGGTGCTCTCG +
Preference number: 5 (lower is better)
Translates to: LGSSLETLSTMHVFELCAGTEDL*LAKVLS
Trigger: CGAGAGCACCTTTGCCAACAACAAGTCCTCAGTGCC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCAAAGCCCTGGGGTTTTaGTTGTTAGGCACACAGGGG +
Preference number: 5 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTKALGF*LLGTQG
Trigger: CCCCTGTGTGCCTAACAACAAAAACCCCAGGGCTTT...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTCCGCTATTGGCACCATaGCTCACATACCCACCCTCC +
Preference number: 5 (lower is better)
Translates to: FATQPHSGCISCFHHHPLPLLAP*LTYPPS
Trigger: GGAGGGTGGGTATGTGAGCAATGGTGCCAATAGCGG...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCTTTCAGCCGCTTCCATaGTCTGCCCTCTCAGGGTAT +
Preference number: 5 (lower is better)
Translates to: TVELTHRINSPTASFRTGFQPLP*SALSGY
Trigger: ATACCCTGAGAGGGCAGACAATGGAAGCGGCTGAAA...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGCTCACCCAGGCTCCTaGGCCATGAGACAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKAHPGS*AMRQSS
Trigger: AGAACTCTGTCTCATGGCCAAGGAGCCTGGGTGAGC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGTGGAGGTGGTCCCCTTaGGGTTCTGCACAGGTACGG +
Preference number: 5 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGWRWSP*GSAQVR
Trigger: CCGTACCTGTGCAGAACCCAAAGGGGACCACCTCCA...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTGGTCTCTGGAACTTTTaGTCGCTCAGGCCAGAAACC +
Preference number: 5 (lower is better)
Translates to: LGSSLETLSTMHVFELCAGLWNF*SLRPET
Trigger: GGTTTCTGGCCTGAGCGACAAAAAGTTCCAGAGACC...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGTGCTGCCGGCGCAGTTaGTTCCGGTTCTTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVCCRRS*FRFFFW
Trigger: CCAGAAGAAGAACCGGAACAAACTGCGCCGGCAGCA...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTTCCATGAATCGGCCCTaGTCTTTCAGGCTTACGCTG +
Preference number: 5 (lower is better)
Translates to: LGSSLETLSTMHVFELCASMNRP*SFRLTL
Trigger: CAGCGTAAGCCTGAAAGACAAGGGCCGATTCATGGA...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTACTGAGGACTTGTTGTaGGCAAAGGTGCTCTCGCCA +
Preference number: 5 (lower is better)
Translates to: LGSSLETLSTMHVFELCATEDLL*AKVLSP
Trigger: TGGCGAGAGCACCTTTGCCAACAACAAGTCCTCAGT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTTTAGGCACACAGGGGTaGGACTGGTTCCCTATACAG +
Preference number: 5 (lower is better)
Translates to: LGSSLETLSTMHVFELCALGTQG*DWFPIQ
Trigger: CTGTATAGGGAACCAGTCCAACCCCTGTGTGCCTAA...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGTGCTGGTCACCAGGGTaGCCCCCAGTAGGAACCAGA +
Preference number: 5 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGCWSPG*PPVGTR
Trigger: TCTGGTTCCTACTGGGGGCAACCCTGGTGACCAGCA...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCGAAGGGATCAAAGCATaGGAAACATCCCCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: TVELTHRINSPTASFRTGEGIKA*ETSPSL
Trigger: GAGAGAGGGGGATGTTTCCAATGCTTTGATCCCTTC...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCAAGTGCCTGAAAAGCTaGAGTTCGGTGACGGAAGAC +
Preference number: 5 (lower is better)
Translates to: TVELTHRINSPTASFRTGKCLKS*SSVTED
Trigger: GTCTTCCGTCACCGAACTCAAGCTTTTCAGGCACTT...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCCCTTATTCCTCCCATaGAGAACAGACCTCTCCACC +
Preference number: 5 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSPLFLP*RTDLST
Trigger: GGTGGAGAGGTCTGTTCTCAATGGGAGGAATAAGGG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTCATCTCCTGGAGCTTaGAACAATCCTCCACCCTGG +
Preference number: 5 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSSSPGA*NNPPPW
Trigger: CCAGGGTGGAGGATTGTTCAAAGCTCCAGGAGATGA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCACACTGCAGTTGCCCTaGACTCCACATCTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTTLQLP*TPHLLL
Trigger: AAGCAAGAGATGTGGAGTCAAGGGCAACTGCAGTGT...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTGGCCTCTCAGTTCCTaGACCCCTGCTCCTTCTATA +
Preference number: 5 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSWPLSS*TPAPSI
Trigger: TATAGAAGGAGCAGGGGTCAAGGAACTGAGAGGCCA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGGTGAGCATTTCCACTaGCACCTTCCTCATGCCCTG +
Preference number: 5 (lower is better)
Translates to: FATQPHSGCISCFHHHPLGEHFH*HLPHAL
Trigger: CAGGGCATGAGGAAGGTGCAAGTGGAAATGCTCACC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGAAACCTGGCTCCTCTTaGAGGACCCTGAATCACTCC +
Preference number: 5 (lower is better)
Translates to: FTEKAGREKERKHYRLPEKPGSS*RTLNHS
Trigger: GGAGTGATTCAGGGTCCTCAAAGAGGAGCCAGGTTT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCGGGGCAGACTCTAGGTaGCTCTTGCTAAATCTCCAA +
Preference number: 5 (lower is better)
Translates to: TVELTHRINSPTASFRTGGADSR*LLLNLQ
Trigger: TTGGAGATTTAGCAAGAGCAACCTAGAGTCTGCCCC...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGCTTACTGATAGTCCCTaGCAGTGGACTTCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: FTEKAGREKERKHYRLPELTDSP*QWTSGW
Trigger: CCACCCTGAAGTCCACTGCAAGGGACTATCAGTAAG...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTTGCACAGGTACGGAGTaGTTAAACACCAGACCCCAG +
Preference number: 5 (lower is better)
Translates to: FATQPHSGCISCFHHHPLCTGTE*LNTRPQ
Trigger: CTGGGGTCTGGTGTTTAACAACTCCGTACCTGTGCA...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATACTGACACCATGATCTaGGAGGTGGTCCCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYTDTMI*EVVPFG
Trigger: CCCAAAGGGGACCACCTCCAAGATCATGGTGTCAGT...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGCCACCCAGAATCTTTTaGGATGGCAATGCCATAGCC +
Preference number: 5 (lower is better)
Translates to: FTEKAGREKERKHYRLPEPPRIF*DGNAIA
Trigger: GGCTATGGCATTGCCATCCAAAAAGATTCTGGGTGG...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTAGCAGGCGCAGGATGTaGGAGTGTGTGTTGTTCATG +
Preference number: 5 (lower is better)
Translates to: FATQPHSGCISCFHHHPLSRRRM*ECVLFM
Trigger: CATGAACAACACACACTCCAACATCCTGCGCCTGCT...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGCTCTTGAAGGAGAATTaGCCGTACAGGTCACTGAGC +
Preference number: 5 (lower is better)
Translates to: FTEKAGREKERKHYRLPELLKEN*PYRSLS
Trigger: GCTCAGTGACCTGTACGGCAAATTCTCCTTCAAGAG...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGGGGTGAGTTCTCCTTaGTTCGGAACTGGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVGVSSP*FGTGPG
Trigger: ACCTGGACCAGTTCCGAACAAAGGAGAACTCACCCC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTAGGTTGCCTGCTTTCTaGCAAGCCTCACACCGGATG +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLRLPAF*QASHRM
Trigger: CATCCGGTGTGAGGCTTGCAAGAAAGCAGGCAACCT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGGGGGATGAAAGGGTTTaGCGTGACCCGGTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGGDERV*RDPVRV
Trigger: TACCCTGACCGGGTCACGCAAAACCCTTTCATCCCC...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
49% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCTCACATAGCCTCTTTTaGGTTCTCCCAGCTTCACTC +
Preference number: 5 (lower is better)
Translates to: TVELTHRINSPTASFRTGSHSLF*VLPASL
Trigger: GAGTGAAGCTGGGAGAACCAAAAAGAGGCTATGTGA...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGGTTCTTCCCCAAACCTaGGCCAGTCGAGAGTCTAAA +
Preference number: 5 (lower is better)
Translates to: FTEKAGREKERKHYRLPEVLPQT*ASRESK
Trigger: TTTAGACTCTCGACTGGCCAAGGTTTGGGGAAGAAC...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCACTGAAAGAGCTCCCTaGGTTCTAGATTGCTGTTCG +
Preference number: 5 (lower is better)
Translates to: TVELTHRINSPTASFRTGTERAP*VLDCCS
Trigger: CGAACAGCAATCTAGAACCAAGGGAGCTCTTTCAGT...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGAATACAGTGGTCCTGTaGGACCACCACCTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVNTVVL*DHHLGS
Trigger: AGACCCCAGGTGGTGGTCCAACAGGACCACTGTATT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCTCACTCATCTCCGCTTaGGTCCTTGCTCTTTCAAGT +
Preference number: 5 (lower is better)
Translates to: TVELTHRINSPTASFRTGSLISA*VLALSS
Trigger: ACTTGAAAGAGCAAGGACCAAAGCGGAGATGAGTGA...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCAAGTTCATGTGGATCTaGCTGTTCCGGAGCAAGCTC +
Preference number: 5 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSKFMWI*LFRSKL
Trigger: GAGCTTGCTCCGGAACAGCAAGATCCACATGAACTT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCTTGACAGCAGGGCCTTaGCAATTGCTTTCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: TVELTHRINSPTASFRTGLTAGP*QLLSLC
Trigger: GCAAAGAGAAAGCAATTGCAAAGGCCCTGCTGTCAA...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTTCCTTCCCCTCTTTCTaGAATCCACCCCATCATGCT +
Preference number: 5 (lower is better)
Translates to: LGSSLETLSTMHVFELCASFPSF*NPPHHA
Trigger: AGCATGATGGGGTGGATTCAAGAAAGAGGGGAAGGA...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGTGGAGATGCCCTTCTaGCCCCTCATTGCCATTCCA +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVVEMPF*PLIAIP
Trigger: TGGAATGGCAATGAGGGGCAAGAAGGGCATCTCCAC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCGTAATTCTGATGCTGTaGGAGCACTGGCTCCTGTCA +
Preference number: 5 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSVILML*EHWLLS
Trigger: TGACAGGAGCCAGTGCTCCAACAGCATCAGAATTAC...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTGGTGCAGCTGTGAATTaGCAACGCAACCCCATAGTG +
Preference number: 5 (lower is better)
Translates to: FATQPHSGCISCFHHHPLGAAVN*QRNPIV
Trigger: CACTATGGGGTTGCGTTGCAAATTCACAGCTGCACC...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTTTCATCTGCAGGGACTaGTCTTTCCACTTCCCCACC +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLFICRD*SFHFPT
Trigger: GGTGGGGAAGTGGAAAGACAAGTCCCTGCAGATGAA...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTATGTTGGAGTGTGTGTaGTTCATGGTTGCGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLMLECV*FMVAVG
Trigger: CCCCACCGCAACCATGAACAACACACACTCCAACAT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCAGGCTGTCCTTATATaGCTGCTTACGCCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYQAVLI*LLTPLG
Trigger: GCCAAGAGGCGTAAGCAGCAATATAAGGACAGCCTG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGAGGGAAACAAGGTGTaGCAGGAAGGTAGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVEGNKV*QEGRRA
Trigger: AGCCCTTCTACCTTCCTGCAACACCTTGTTTCCCTC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCGGAGATTTCTCAGGATaGAGCTTCCTGAAACCTTTC +
Preference number: 5 (lower is better)
Translates to: TVELTHRINSPTASFRTGGDFSG*SFLKPF
Trigger: GAAAGGTTTCAGGAAGCTCAATCCTGAGAAATCTCC...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCTGTACATGCATCACTTaGAAGGGTGTGCAAAGTCTC +
Preference number: 5 (lower is better)
Translates to: TVELTHRINSPTASFRTGCTCIT*KGVQSL
Trigger: GAGACTTTGCACACCCTTCAAAGTGATGCATGTACA...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTCTCCGCTTTGGTCCTaGCTCTTTCAAGTTTCCCTA +
Preference number: 5 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSSPLWS*LFQVSL
Trigger: TAGGGAAACTTGAAAGAGCAAGGACCAAAGCGGAGA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTACCTTGATATTTTTCTaGCTCCTGACCCTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LGSSLETLSTMHVFELCATLIFF*LLTLGE
Trigger: CTCTCCCAGGGTCAGGAGCAAGAAAAATATCAAGGT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGTAAGACTTCCTCCATaGGCCGCTATGGTACAGCTC +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVVRLPP*AAMVQL
Trigger: GAGCTGTACCATAGCGGCCAATGGAGGAAGTCTTAC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCGCACTTGATCTTGAGTaGAAGCACTCAGGAACAAGA +
Preference number: 5 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTALDLE*KHSGTR
Trigger: TCTTGTTCCTGAGTGCTTCAACTCAAGATCAAGTGC...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGGAGAATGGAAATCATaGGAGAGGGGCTGCCCTAAA +
Preference number: 5 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKGEWKS*ERGCPK
Trigger: TTTAGGGCAGCCCCTCTCCAATGATTTCCATTCTCC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGTTAATCTATGGCACTTaGTCCCTCCTCTCCCCTGCG +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVLIYGT*SLLSPA
Trigger: CGCAGGGGAGAGGAGGGACAAAGTGCCATAGATTAA...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCCCCTCTATGTTTGTATaGAATCCCATGCCCTCTCAC +
Preference number: 5 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSPSMFV*NPMPSH
Trigger: GTGAGAGGGCATGGGATTCAATACAAACATAGAGGG...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTAAGCTTGCTGTTCAATaGATGGGCCAAACTGGAAGA +
Preference number: 5 (lower is better)
Translates to: LGSSLETLSTMHVFELCAKLAVQ*MGQTGR
Trigger: TCTTCCAGTTTGGCCCATCAATTGAACAGCAAGCTT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCAACGTACTTTCCAGTTaGTTCAAGAATCCACTCTGC +
Preference number: 5 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTNVLSS*FKNPLC
Trigger: GCAGAGTGGATTCTTGAACAAACTGGAAAGTACGTT...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAAGTCAGACCTGGGGTTaGCTTAGAGCCAAATTGAAC +
Preference number: 5 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKSQTWG*LRAKLN
Trigger: GTTCAATTTGGCTCTAAGCAAACCCCAGGTCTGACT...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATTGTTCCCTACTCTATaGCTCTCAGTGCTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKLFPTL*LSVLSA
Trigger: AGCAGAGAGCACTGAGAGCAATAGAGTAGGGAACAA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCAGTAACAAGAAATTATaGCTGGCAGACTACGGCAAG +
Preference number: 5 (lower is better)
Translates to: TVELTHRINSPTASFRTGSNKKL*LADYGK
Trigger: CTTGCCGTAGTCTGCCAGCAATAATTTCTTGTTACT...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATAGGTCAGAAGTGATGTaGTCTCCCCCTGAGGTAATG +
Preference number: 5 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYRSEVM*SPPEVM
Trigger: CATTACCTCAGGGGGAGACAACATCACTTCTGACCT...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGATGGGGCCAGGTTCCTaGTGGATATCAGGACCTCAC +
Preference number: 5 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMMGPGS*WISGPH
Trigger: GTGAGGTCCTGATATCCACAAGGAACCTGGCCCCAT...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCAACATTGTTTGTGTTTaGAGGATGGGCTGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSNIVCV*RMGCSE
Trigger: CTCTGAGCAGCCCATCCTCAAAACACAAACAATGTT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTGACAGAGGAAATATGGTGCCACCAGCCTGTCTTTGTGTGGAATGTGGTAACCATGGGAGTTTTGTTCTaGGTCTTAGTTGTCTCCCTA +
Preference number: 5 (lower is better)
Translates to: LTEEIWCHQPVFVWNVVTMGVLF*VLVVSL
Trigger: TAGGGAGACAACTAAGACCAAGAACAAAACTCCCAT...GGTTACCACATTCCACACAAAGACAGGCTGGTGGCACCATATTTCCTCTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCAAGGAGCTTGGAAGGTaGTTCTCAACGATAAAACCC +
Preference number: 5 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSKELGR*FSTIKP
Trigger: GGGTTTTATCGTTGAGAACAACCTTCCAAGCTCCTT...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGTTAACACACTGCAGTaGCCCTTGACTCCACATCTC +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVVNTLQ*PLTPHL
Trigger: GAGATGTGGAGTCAAGGGCAACTGCAGTGTGTTAAC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTAGTCCCTCTTATCACTaGGACTTTCATCCCCAGATA +
Preference number: 5 (lower is better)
Translates to: LGSSLETLSTMHVFELCASPSYH*DFHPQI
Trigger: TATCTGGGGATGAAAGTCCAAGTGATAAGAGGGACT...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTTCTCTTCCCATCTTCTaGGTCATTCCAGAATTCCAC +
Preference number: 5 (lower is better)
Translates to: LGSSLETLSTMHVFELCASLPIF*VIPEFH
Trigger: GTGGAATTCTGGAATGACCAAGAAGATGGGAAGAGA...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTATGGTGGTAGTGATCTaGGTACACGTTGCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLMVVVI*VHVAVL
Trigger: AAGGACAGCAACGTGTACCAAGATCACTACCACCAT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGACAGTTTTGGATGGATaGGGTGTTGTTTCATACCCA +
Preference number: 5 (lower is better)
Translates to: FTEKAGREKERKHYRLPETVLDG*GVVSYP
Trigger: TGGGTATGAAACAACACCCAATCCATCCAAAACTGT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGTCATACATGCGTTTTaGGCACTACTGACACCAGCA +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLVIHAF*ALLTPA
Trigger: TGCTGGTGTCAGTAGTGCCAAAAACGCATGTATGAC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTTTTCCGAAGCTATCATaGAAGCCAGTAACCAAGGGG +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLFPKLS*KPVTKG
Trigger: CCCCTTGGTTACTGGCTTCAATGATAGCTTCGGAAA...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGACCTCACACATAAGGTaGCATTCAGGTTCCTCACTC +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVTSHIR*HSGSSL
Trigger: GAGTGAGGAACCTGAATGCAACCTTATGTGTGAGGT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGGGCCAGGTCTCTGGTTaGCAGAGGGTTCTTATGTCA +
Preference number: 5 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMGQVSG*QRVLMS
Trigger: TGACATAAGAACCCTCTGCAAACCAGAGACCTGGCC...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGTTCCTGAAGGCTCTTTaGCCATGTAGCACTCTGGAA +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVFLKAL*PCSTLE
Trigger: TTCCAGAGTGCTACATGGCAAAAGAGCCTTCAGGAA...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCTCTGGGCTCTAAAATaGAGCTTATCTTCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: LGSSLETLSTMHVFELCALWALK*SLSSLS
Trigger: AGACAGAGAAGATAAGCTCAATTTTAGAGCCCAGAG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGGCAGGGCCTTTGCAATaGCTTTCTCTTTGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGAGPLQ*LSLCLC
Trigger: GCAAAGGCAAAGAGAAAGCAATTGCAAAGGCCCTGC...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCTCTTACCAGGATTATaGCAAGAGCTTCCTAACCGG +
Preference number: 5 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYLLPGL*QELPNR
Trigger: CCGGTTAGGAAGCTCTTGCAATAATCCTGGTAAGAG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGCAATTCCTTTCCTCTaGCTCTTACAGAAACCTGGC +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLAIPFL*LLQKPG
Trigger: GCCAGGTTTCTGTAAGAGCAAGAGGAAAGGAATTGC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATTTGCCTCTAGCTCCCTaGAAATGTTTCCACAAGCGT +
Preference number: 5 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYLPLAP*KCFHKR
Trigger: ACGCTTGTGGAAACATTTCAAGGGAGCTAGAGGCAA...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGATCTTTCCGGAACAGTaGGCTGATGGGGACACAACC +
Preference number: 5 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMIFPEQ*ADGDTT
Trigger: GGTTGTGTCCCCATCAGCCAACTGTTCCGGAAAGAT...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTATCCGATCGTTCCTCATaGATGGTGAGTGAGCCCACT +
Preference number: 5 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLSDRSS*MVSEPT
Trigger: AGTGGGCTCACTCACCATCAATGAGGAACGATCGGA...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTATCCTCCCACTCCACGTaGGTCAGGTTCTTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVSSHST*VRFFSQ
Trigger: TTGGGAGAAGAACCTGACCAACGTGGAGTGGGAGGA...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACCATTGCTGGAGCCATaGAAAGCCCTGGGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLPLLEP*KALGFL
Trigger: CAAAAACCCCAGGGCTTTCAATGGCTCCAGCAATGG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAACTAACTTCAGCAATCTaGCTAAGGGAATCATCTCAC +
Preference number: 5 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKLTSAI*LRESSH
Trigger: GTGAGATGATTCCCTTAGCAAGATTGCTGAAGTTAG...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTAATAAAGAGCCGCTATaGGCACCATTGCTCACATAC +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLNKEPL*APLLTY
Trigger: GTATGTGAGCAATGGTGCCAATAGCGGCTCTTTATT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCGGAATCTCACAGTTTaGGATGGATTGGGTGTTGTT +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVRNLTV*DGLGVV
Trigger: AACAACACCCAATCCATCCAAAACTGTGAGATTCCG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTTGCCGGTGAGAATATaGCTAATGTGGGTAAATACA +
Preference number: 5 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSLPVRI*LMWVNT
Trigger: TGTATTTACCCACATTAGCAATATTCTCACCGGCAA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTCAGCTTCTGGCTTTATaGGTGACACAAAAGGAAGCT +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLQLLAL*VTQKEA
Trigger: AGCTTCCTTTTGTGTCACCAATAAAGCCAGAAGCTG...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAGGTTGTAAGAGAAGGTaGTTGCAAGATTCTCTGATC +
Preference number: 5 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKGCKRR*LQDSLI
Trigger: GATCAGAGAATCTTGCAACAACCTTCTCTTACAACC...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTGGAACAAGACCTCATTaGCCTGCTTGTCATTCTTTC +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLGTRPH*PACHSF
Trigger: GAAAGAATGACAAGCAGGCAAATGAGGTCTTGTTCC...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ACAGTGGAACTGACCCATAGAATAAATAGCCCTACCGCAAGTTTCAGGACCGGCTCCATCACAAAGGGCTaGTGCCTTGAAATAAATTTA +
Preference number: 5 (lower is better)
Translates to: TVELTHRINSPTASFRTGSITKG*CLEINL
Trigger: TAAATTTATTTCAAGGCACAAGCCCTTTGTGATGGA...GCCGGTCCTGAAACTTGCGGTAGGGCTATTTATTCTATGGGTCAGTTCCACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGACAGACGCTGAATATTaGGGAGGATTACTTAACGTT +
Preference number: 5 (lower is better)
Translates to: FTEKAGREKERKHYRLPETDAEY*GGLLNV
Trigger: AACGTTAAGTAATCCTCCCAAATATTCAGCGTCTGT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGGCTTTCTCTTTGCCTTaGCATAGAAAGCCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGAFSLP*HRKPQV
Trigger: GACTTGGGGCTTTCTATGCAAAGGCAAAGAGAAAGC...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATTTCTGGCACTCACCCTaGTCATTGGAGTCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYFWHSP*SLESLF
Trigger: AAACAAAGACTCCAATGACAAGGGTGAGTGCCAGAA...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGTTCATGACTCTTCTTaGCAAGGCAAAAGGATATGC +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVVHDSS*QGKRIC
Trigger: GCATATCCTTTTGCCTTGCAAAGAAGAGTCATGAAC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGTGGCAATTACGGTTTTaGGTTTTTGGAGCGTTAGTG +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVWQLRF*VFGALV
Trigger: CACTAACGCTCCAAAAACCAAAAACCGTAATTGCCA...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAAAGGGAGTGAGCATGTaGGGAATGTCCAGTCCCTTC +
Preference number: 5 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVKGVSM*GMSSPF
Trigger: GAAGGGACTGGACATTCCCAACATGCTCACTCCCTT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAAGTGACTATGCGTTTTaGGCAGGGGACTGTGTTCCT +
Preference number: 5 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLSDYAF*AGDCVP
Trigger: AGGAACACAGTCCCCTGCCAAAAACGCATAGTCACT...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAAAGACCATGCCAGGCTaGCCAGAACAGACACCCATA +
Preference number: 5 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVKTMPG*PEQTPI
Trigger: TATGGGTGTCTGTTCTGGCAAGCCTGGCATGGTCTT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAGTGTGTTGTTCATGGTaGCGGTGGGGGAGTTCATTA +
Preference number: 5 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLVCCSW*RWGSSL
Trigger: TAATGAACTCCCCCACCGCAACCATGAACAACACAC...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACTGATGTCATACAGGTaGCCTGCTTTCTTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLLMSYR*PAFLQA
Trigger: GGCTTGCAAGAAAGCAGGCAACCTGTATGACATCAG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTACAAGGTTGCCTTCTCTaGAGGCACCTGACTACACAT +
Preference number: 5 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLQGCLL*RHLTTH
Trigger: ATGTGTAGTCAGGTGCCTCAAGAGAAGGCAACCTTG...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATAACAACAGAGGGGTCTaGAAGGAAGGAAGATATAGA +
Preference number: 5 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYNNRGV*KEGRYR
Trigger: TCTATATCTTCCTTCCTTCAAGACCCCTCTGTTGTT...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATTACCCTTTTGAGAAGTaGGGAAGTGAAAAGATAGCG +
Preference number: 5 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYYPFEK*GSEKIA
Trigger: CGCTATCTTTTCACTTCCCAACTTCTCAAAAGGGTA...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGTGGAAGATAAAGAAGTaGTTCTGGTCTTTGAAGACT +
Preference number: 5 (lower is better)
Translates to: FTEKAGREKERKHYRLPEWKIKK*FWSLKT
Trigger: AGTCTTCAAAGACCAGAACAACTTCTTTATCTTCCA...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGCCCTCTGTCACTTACTaGAACACATGTAGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGPSVTY*NTCSVP
Trigger: TGGAACACTACATGTGTTCAAGTAAGTGACAGAGGG...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGGAGACGATAACTAGGTaGTTTCATCACAAAGAACAT +
Preference number: 5 (lower is better)
Translates to: FTEKAGREKERKHYRLPEETITR*FHHKEH
Trigger: ATGTTCTTTGTGATGAAACAACCTAGTTATCGTCTC...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGGTGGAGCCTAATGGGTaGCTGGTTATCCTAGAAACT +
Preference number: 5 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMVEPNG*LVILET
Trigger: AGTTTCTAGGATAACCAGCAACCCATTAGGCTCCAC...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTGGGCTCGAGTTTGGAAACATTAAGTACCATGCACGTGTTCGAGCTCTGTGCTCCTTTCTTCAGGATTTaGGCAGGCAGTAATTATTTA +
Preference number: 5 (lower is better)
Translates to: LGSSLETLSTMHVFELCAPFFRI*AGSNYL
Trigger: TAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGG...AGCACAGAGCTCGAACACGTGCATGGTACTTAATGTTTCCAAACTCGAGCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTACAGAGAAGGCTGGCCGGGAGAAGGAACGAAAACATTATCGGTTACCAGAGATTTTATGTGAATTATaGGGAGGCAAAAGGACAAGG +
Preference number: 5 (lower is better)
Translates to: FTEKAGREKERKHYRLPEILCEL*GGKRTR
Trigger: CCTTGTCCTTTTGCCTCCCAATAATTCACATAAAAT...CTCTGGTAACCGATAATGTTTTCGTTCCTTCTCCCGGCCAGCCTTCTCTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGACTCCTACCAACAATTGGAAACCAACTGGGCAAGGGGTTTTTCCCAAACAGCTTAGTGGCTTCAGTCTaGTGCAGATATAGATTTTCT +
Preference number: 5 (lower is better)
Translates to: RLLPTIGNQLGKGFFPNSLVASV*CRYRFS
Trigger: AGAAAATCTATATCTGCACAAGACTGAAGCCACTAA...GCTGTTTGGGAAAAACCCCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAAAACTGCAAAGACCCTaGGGATTAAATGAAATCTGC +
Preference number: 5 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKKLQRP*GLNEIC
Trigger: GCAGATTTCATTTAATCCCAAGGGTCTTTGCAGTTT...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGCCACTGAAGTTCATTTaGGAATCATGGCCACCCAGA +
Preference number: 5 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMPLKFI*ESWPPR
Trigger: TCTGGGTGGCCATGATTCCAAAATGAACTTCAGTGG...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAAAGCTTTTTGTCTGCTaGTCACTGAATCTATTTCCC +
Preference number: 5 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKKLFVC*SLNLFP
Trigger: GGGAAATAGATTCAGTGACAAGCAGACAAAAAGCTT...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGAGTTCTCAGTGCCCCTaGGCTTCCCAATTTAAGTCA +
Preference number: 5 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMSSQCP*ASQFKS
Trigger: TGACTTAAATTGGGAAGCCAAGGGGCACTGAGAACT...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAGACTCCTACCAACAATaGGAAACCAACTGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLDSYQQ*ETNWAR
Trigger: CCTTGCCCAGTTGGTTTCCAATTGTTGGTAGGAGTC...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 90 bp ATGTTGAGCATTACGGAAGCTTGCTGTTCAATTGATGGGCCAAACTaGAAGAACATGGAGGATTCATCCTTATCTGCCATTATCATAGAG +
Preference number: 5 (lower is better)
Translates to: MLSITEACCSIDGPN*KNMEDSSLSAIIIE
Trigger: CTCTATGATAATGGCAGATAAGGATGAATCCTCCATGTTCTTCCAGTTTGGCCCATCAATTGAACAGCAAGCTTCCGTAATGCTCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS-3UTR CAA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAAACTCGTCGACTCCCTaGGTTTGTAGAAGCCAAACC +
Preference number: 5 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVNSSTP*VCRSQT
Trigger: GGTTTGGCTTCTACAAACCAAGGGAGTCGACGAGTT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATCCCTCAAAAGTGACATaGATCAGATACCTATTTAGC +
Preference number: 5 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYPSKVT*IRYLFS
Trigger: GCTAAATAGGTATCTGATCAATGTCACTTTTGAGGG...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAAGCAACCAAATAGCTTaGCCGATGGTGAAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLSNQIA*PMVKEG
Trigger: ACCCTCTTTCACCATCGGCAAAGCTATTTGGTTGCT...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAAATGAAAAGATCAGTTaGGGAAAAGCTACCTTTGTG +
Preference number: 5 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKNEKIS*GKATFV
Trigger: CACAAAGGTAGCTTTTCCCAAACTGATCTTTTCATT...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGAACTGGTTGAAACAATaGCCAACCACTGAGGACTTG +
Preference number: 5 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMNWLKQ*PTTEDL
Trigger: CAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTT...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTAAGAGGAAAAAGGAATaGCCGGTGAGAATATTGCTA +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLKRKKE*PVRILL
Trigger: TAGCAATATTCTCACCGGCAATTCCTTTTTCCTCTT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGGGTGATTATGTTGGTTaGCAGCAATGGTTTTGGATA +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVGDYVG*QQWFWI
Trigger: TATCCAAAACCATTGCTGCAAACCAACATAATCACC...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTAGAATGATTGATAGATaGCTAAGTAGAGCCAAGAGA +
Preference number: 5 (lower is better)
Translates to: FATQPHSGCISCFHHHPLRMIDR*LSRAKR
Trigger: TCTCTTGGCTCTACTTAGCAATCTATCAATCATTCT...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTTGCCTATGTGAAACCTaGATATTTTTCTTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLCLCET*IFFLLL
Trigger: CAGGAGCAAGAAAAATATCAAGGTTTCACATAGGCA...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTTGGTTCAGCCAAGTTTaGGTTCTGTCAAGAATTTTC +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLWFSQV*VLSRIF
Trigger: GAAAATTCTTGACAGAACCAAAACTTGGCTGAACCA...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTTGCAACGCAACCCCATAGTGGATGCATATCATGTTTCCATCATCACCCCCTTCATGATTTTTCTGGTTaGAGAATTGTCCTTGGGTTA +
Preference number: 5 (lower is better)
Translates to: FATQPHSGCISCFHHHPLHDFSG*RIVLGL
Trigger: TAACCCAAGGACAATTCTCAAACCAGAAAAATCATG...AAGGGGGTGATGATGGAAACATGATATGCATCCACTATGGGGTTGCGTTGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTACATTTACCAGCCCACTaGCATCTGTGCCCAAATGCA +
Preference number: 5 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVHLPAH*HLCPNA
Trigger: TGCATTTGGGCACAGATGCAAGTGGGCTGGTAAATG...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAGTGTCTCCGACATTTTaGTTCTCACTCTTCCTGCCG +
Preference number: 5 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVVSPTF*FSLFLP
Trigger: CGGCAGGAAGAGTGAGAACAAAAATGTCGGAGACAC...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAAATGTCTCCTATATTTTaGGTGTCTCCGACATTTTTG +
Preference number: 5 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKMSPIF*VSPTFL
Trigger: CAAAAATGTCGGAGACACCAAAAATATAGGAGACAT...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTACCAGTCCATCAACAGGACCTTAGAAGGCCACATGGATTCCATAGGGTAAAATTGACTCCACATCTCTaGCTTTCATTATATTCACCT +
Preference number: 5 (lower is better)
Translates to: VPVHQQDLRRPHGFHRVKLTPHL*LSLYSP
Trigger: AGGTGAATATAATGAAAGCAAGAGATGTGGAGTCAA...TTTTACCCTATGGAATCCATGTGGCCTTCTAAGGTCCTGTTGATGGACTGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATTGGGCAGAAGCAAAGTaGCTTTCCAATCCTTTTTAT +
Preference number: 5 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYWAEAK*LSNPFY
Trigger: ATAAAAAGGATTGGAAAGCAACTTTGCTTCTGCCCA...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGACCATGCTGAAGGGTTaGCCTTTATTAGTGGACAGA +
Preference number: 5 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMTMLKG*PLLVDR
Trigger: TCTGTCCACTAATAAAGGCAAACCCTTCAGCATGGT...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGGATCAAGAATCACCCTaGACGAGCACTCTCGATAGA +
Preference number: 5 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEDQESP*TSTLDR
Trigger: TCTATCGAGAGTGCTCGTCAAGGGTGATTCTTGATC...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAGTCCCTTCTTCTCGCTaGCATATCCACATAAGAAAG +
Preference number: 5 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLVPSSR*HIHIRK
Trigger: CTTTCTTATGTGGATATGCAAGCGAGAAGAAGGGAC...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGAAGAATGATGGGGCTTaGAAGTTTCTTGAGCTGATT +
Preference number: 5 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGKNDGA*KFLELI
Trigger: AATCAGCTCAAGAAACTTCAAAGCCCCATCATTCTT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGCACTGCTTGGGGATATaGAAAGAAACAATAGAAAGA +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVHCLGI*KETIER
Trigger: TCTTTCTATTGTTTCTTTCAATATCCCCAAGCAGTG...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTAAACAATCACACTGCTaGGGGATATTGAAAGAAACA +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLKQSHC*GILKET
Trigger: TGTTTCTTTCAATATCCCCAAGCAGTGTGATTGTTT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTATTATGTACCTTGTTCTaGCAGGATTGCTCACCGCCT +
Preference number: 5 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVLCTLF*QDCSPP
Trigger: AGGCGGTGAGCAATCCTGCAAGAACAAGGTACATAA...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGATAGAAAAGGCAAGGTaGTGGTTAGAGAGGAAATCC +
Preference number: 5 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMIEKAR*WLERKS
Trigger: GGATTTCCTCTCTAACCACAACCTTGCCTTTTCTAT...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTTGTGACAAGGTTCTTTaGGTGCTGAAAGTGTTAAAA +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLCDKVL*VLKVLK
Trigger: TTTTAACACTTTCAGCACCAAAAGAACCTTGTCACA...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGATCTATTTGTTAAGATaGTGTGTGTGCATTAGGGAG +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVIYLLR*CVCIRE
Trigger: CTCCCTAATGCACACACACAATCTTAACAAATAGAT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CTTTGCATAGAAAGCCCCAAGTCTCACTCCCTCATTTCCTCCAAACCTTTACTTAGCAGGATAACTATGTaGCTCTACCACAAAGAAAAT +
Preference number: 5 (lower is better)
Translates to: LCIESPKSHSLISSKPLLSRITM*LYHKEN
Trigger: ATTTTCTTTGTGGTAGAGCAACATAGTTATCCTGCT...AAGTAAAGGTTTGGAGGAAATGAGGGAGTGAGACTTGGGGCTTTCTATGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATAAATTTGGACAAGTTTaGGTTCAGCCAAGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYKFGQV*VQPSFG
Trigger: ACCAAAACTTGGCTGAACCAAAACTTGTCCAAATTT...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp AGGGAGCATCAGTTCTGCTGGTACCCTCATCCCTGGAGTTTTATACATGTATATTTTGTAGACAAGGTTTaGAAGAATCGAGCTACAATG +
Preference number: 5 (lower is better)
Translates to: REHQFCWYPHPWSFIHVYFVDKV*KNRATM
Trigger: CATTGTAGCTCGATTCTTCAAAACCTTGTCTACAAA...ATATACATGTATAAAACTCCAGGGATGAGGGTACCAGCAGAACTGATGCTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp ATAGGAATAGATAGGCTATCTCTTCTAAGTCATAGAGCTCACAGGGCCACTGTGATCTATAAAAACATGTaGTGGCCTATCACAGTTAGC +
Preference number: 5 (lower is better)
Translates to: IGIDRLSLLSHRAHRATVIYKNM*WPITVS
Trigger: GCTAACTGTGATAGGCCACAACATGTTTTTATAGAT...CACAGTGGCCCTGTGAGCTCTATGACTTAGAAGAGATAGCCTATCTATTCCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTATATTCTTCCATGATGTaGAGCATTACGGAAGCTTGC +
Preference number: 5 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLYSSMM*SITEAC
Trigger: GCAAGCTTCCGTAATGCTCAACATCATGGAAGAATA...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp TTCCCTTTCTTCAGGATTTTGGCAGGCAGTAATTATTTATTATCGGTCTGGGGGAAGTTGGTGATTATGTaGGTTTGCAGCAATGGTTTT +
Preference number: 5 (lower is better)
Translates to: FPFFRILAGSNYLLSVWGKLVIM*VCSNGF
Trigger: AAAACCATTGCTGCAAACCAACATAATCACCAACTT...CCCCCAGACCGATAATAAATAATTACTGCCTGCCAAAATCCTGAAGAAAGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCTTGGTTCAAACTGGTTGAAACAATTGCCAACCACTGAGGACTTGTTTATGAAGTTGTCACAAGTTTaGCCCTACCTTGCCAATAAT +
Preference number: 5 (lower is better)
Translates to: VLGSNWLKQLPTTEDLFMKLSQV*PYLANN
Trigger: ATTATTGGCAAGGTAGGGCAAAACTTGTGACAACTT...CATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTATGTAAGAGAAGGTTGTaGCAAGATTCTCTGATCTGC +
Preference number: 5 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLCKRRL*QDSLIC
Trigger: GCAGATCAGAGAATCTTGCAACAACCTTCTCTTACA...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGTTCCAAGTAAGGAGCTaGGAAGGTTGTTCTCAACGA +
Preference number: 5 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEFQVRS*EGCSQR
Trigger: TCGTTGAGAACAACCTTCCAAGCTCCTTACTTGGAA...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAGCAATTGCTTTCTCTTaGCCTTTGCATAGAAAGCCC +
Preference number: 5 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVAIAFS*PLHRKP
Trigger: GGGCTTTCTATGCAAAGGCAAAGAGAAAGCAATTGC...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCACACGCATCAGTCATaGTGGCTAAGTGTAATTCTG +
Preference number: 5 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEHTHQS*WLSVIL
Trigger: CAGAATTACACTTAGCCACAATGACTGATGCGTGTG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAGGAAGTCTAGATGATTaGATGCAGGCCACAAATGAT +
Preference number: 5 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLGSLDD*MQATND
Trigger: ATCATTTGTGGCCTGCATCAAATCATCTAGACTTCC...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTACTTGGTTCAAACTGGTaGAAACAATTGCCAACCACT +
Preference number: 5 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVLGSNW*KQLPTT
Trigger: AGTGGTTGGCAATTGTTTCAACCAGTTTGAACCAAG...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAACTTCCCTGATTCTTTaGGAAGTTATTGGGCATCTG +
Preference number: 5 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVTSLIL*EVIGHL
Trigger: CAGATGCCCAATAACTTCCAAAAGAATCAGGGAAGT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCTGCAGAGCATAATGTaGCTATGGCTTGTTTTACTG +
Preference number: 5 (lower is better)
Translates to: VPTIIQINTRKLPYLKLELQSIM*LWLVLL
Trigger: CAGTAAAACAAGCCATAGCAACATTATGCTCTGCAG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAACCTCATTTGCCTGCTaGTCATTCTTTCTCCAACTT +
Preference number: 5 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVTSFAC*SFFLQL
Trigger: AAGTTGGAGAAAGAATGACAAGCAGGCAAATGAGGT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGACTTGTTTATGTACCTaGTTCTTGCAGGATTGCTCA +
Preference number: 5 (lower is better)
Translates to: VPTIIQINTRKLPYLKLETCLCT*FLQDCS
Trigger: TGAGCAATCCTGCAAGAACAAGGTACATAAACAAGT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCAAATGTTATTCAGCTaGTCTGGATTATGGGACACA +
Preference number: 5 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEQMLFS*SGLWDT
Trigger: TGTGTCCCATAATCCAGACAAGCTGAATAACATTTG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTAATTAGAGACTCAATCTaGGTAGTAAAGTGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLIRDSI*VVKCLD
Trigger: ATCCAGACACTTTACTACCAAGATTGAGTCTCTAAT...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp CAATGCCCAGCCTTCCTTTCTTTAAGTTTTCTTAAGCAGACCATGAGTAACTTATTCTTCTTGCTCTTTTaGACTTGTCTCTGTAGATGT +
Preference number: 5 (lower is better)
Translates to: QCPAFLSLSFLKQTMSNLFFLLF*TCLCRC
Trigger: ACATCTACAGAGACAAGTCAAAAAGAGCAAGAAGAA...TAAGTTACTCATGGTCTGCTTAAGAAAACTTAAAGAAAGGAAGGCTGGGCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTATCAGGTGAGGTTAAATaGATTGAATTTGTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVSGEVK*IEFVLF
Trigger: GAAGAGCACAAATTCAATCAATTTAACCTCACCTGA...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGCTGCCTGTAACTTATTaGAGTTCAGTTCTCTATAGT +
Preference number: 5 (lower is better)
Translates to: VPTIIQINTRKLPYLKLELPVTY*SSVLYS
Trigger: ACTATAGAGAACTGAACTCAAATAAGTTACAGGCAG...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GTTCCCACCATAATCCAGATAAATACTCGCAAGCTTCCTTATTTAAAACTAGAGATTTTGGTCCATTTATaGGCCCAAATGAGATTCATG +
Preference number: 5 (lower is better)
Translates to: VPTIIQINTRKLPYLKLEILVHL*AQMRFM
Trigger: CATGAATCTCATTTGGGCCAATAAATGGACCAAAAT...CTCTAGTTTTAAATAAGGAAGCTTGCGAGTATTTATCTGGATTATGGTGGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS-3UTR CAA 90 bp GAAACAAATGTTATTCAGCTTGTCTGGATTATGGGACACACACATAGTCAAGTAATCAGGCTTGTATGTTaGAACTTAATTAGACAGAGG +
Preference number: 5 (lower is better)
Translates to: ETNVIQLVWIMGHTHSQVIRLVC*NLIRQR
Trigger: CCTCTGTCTAATTAAGTTCAAACATACAAGCCTGAT...TACTTGACTATGTGTGTGTCCCATAATCCAGACAAGCTGAATAACATTTGTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS GCA 72 bp CCCCTTCCGGCTCCGAGCGCCTCCGCGGTTGCAGTCTaGGGAGAGGGGTGGCCGGTGGCTGGGAATGGAGGG +
Preference number: 6 (lower is better)
Translates to: PLPAPSASAVAV*GEGWPVAGNGG
Trigger: CCCTCCATTCCCAGCCACCGGCCACCCCTCTCCGCAGACTGCAACCGCGGAGGCGCTCGGAGCCGGAAGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS TCA 72 bp CGGCCCCATGAAGGGCCGAGACCACCGGCTTGTTGGTaGCAAGGGCCCGGAAGTCCGGCCTGGCTTTCGACG +
Preference number: 6 (lower is better)
Translates to: RPHEGPRPPACW*QGPGSPAWLST
Trigger: CGTCGAAAGCCAGGCCGGACTTCCGGGCCCTTGTCACCAACAAGCCGGTGGTCTCGGCCCTTCATGGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp AGAAGCTGGGGGCCGGCTCCGTCCCTCGGTGGAGCATaGTCATTCCCAAAGCGTCCCCTTCCGGCTCCGAGC +
Preference number: 6 (lower is better)
Translates to: RSWGPAPSLGGA*SFPKRPLPAPS
Trigger: GCTCGGAGCCGGAAGGGGACGCTTTGGGAATGACCATGCTCCACCGAGGGACGGAGCCGGCCCCCAGCTTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS GCA 72 bp GGCGACGGTAGGCCAGCTCGATCTCGTCAAACTCCCTaGGGGACTTGGCCGAGGCAGGCCGCTTCTTCAGGC +
Preference number: 6 (lower is better)
Translates to: GDGRPARSRQTP*GTWPRQAASSG
Trigger: GCCTGAAGAAGCGGCCTGCCTCGGCCAAGTCCCGCAGGGAGTTTGACGAGATCGAGCTGGCCTACCGTCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp TGTGTGGAGAAGCTGGGGGCCGGCTCCGTCCCTCGGTaGAGCATGGTCATTCCCAAAGCGTCCCCTTCCGGC +
Preference number: 6 (lower is better)
Translates to: CVEKLGAGSVPR*SMVIPKASPSG
Trigger: GCCGGAAGGGGACGCTTTGGGAATGACCATGCTCCACCGAGGGACGGAGCCGGCCCCCAGCTTCTCCACACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CAA 90 bp CAGCTGCGGCAGAAGTTGCCCCCGGACCGGTCCTCCCACTCCACGTaGGTCAGGTTCTTCTCCCAAGGTGCAGGTACCCCGCTGACCACG +
Preference number: 6 (lower is better)
Translates to: QLRQKLPPDRSSHST*VRFFSQGAGTPLTT
Trigger: CGTGGTCAGCGGGGTACCTGCACCTTGGGAGAAGAACCTGACCAACGTGGAGTGGGAGGACCGGTCCGGGGGCAACTTCTGCCGCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 72 bp AGTCGGGCTCTGAGGGTACTTAGTGGTGGAGGCGTTTaGCGTCACCGCCACTGGGGCAGCCGGCTGGTCCAG +
Preference number: 6 (lower is better)
Translates to: SRALRVLSGGGV*RHRHWGSRLVQ
Trigger: CTGGACCAGCCGGCTGCCCCAGTGGCGGTGACGTCAAACGCCTCCACCACTAAGTACCCTCAGAGCCCGACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp TGGAGCGTTAGTGGAGGAGGCTCTGTGTGGAGAAGCTaGGGGCCGGCTCCGTCCCTCGGTGGAGCATGGTCA +
Preference number: 6 (lower is better)
Translates to: WSVSGGGSVWRS*GPAPSLGGAWS
Trigger: TGACCATGCTCCACCGAGGGACGGAGCCGGCCCCCAGCTTCTCCACACAGAGCCTCCTCCACTAACGCTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000609686.4
ENST00000627535.2
ENST00000630791.2
ENST00000681855.1
CDS CCA 72 bp TGTGTGGAGAAGCTGGGGGCCGGCTCCGTCCCTCGGTaGAGCATGGTCATTCCCAAAGCGTCCCCTTCCTCG +
Preference number: 6 (lower is better)
Translates to: CVEKLGAGSVPR*SMVIPKASPSS
Trigger: CGAGGAAGGGGACGCTTTGGGAATGACCATGCTCCACCGAGGGACGGAGCCGGCCCCCAGCTTCTCCACACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627535.2
CDS TCA 72 bp GGTCCAGGTAGAAGTCCCGTAGCCCTTCCTTGTCCCTaGAGTAGCGCTTGTGGTCAGGGGAGCGGGGCGGTC +
Preference number: 6 (lower is better)
Translates to: GPGRSPVALPCP*SSACGQGSGAV
Trigger: GACCGCCCCGCTCCCCTGACCACAAGCGCTACTTCAGGGACAAGGAAGGGCTACGGGACTTCTACCTGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 72 bp ACCACGCCGTGTTTGTCGCCCGTCCCGTGCTTGATGTaGGACCTGTTGGTACAGGGCCCTCCTCCGCTGACG +
Preference number: 6 (lower is better)
Translates to: TTPCLSPVPCLM*DLLVQGPPPLT
Trigger: CGTCAGCGGAGGAGGGCCCTGTACCAACAGGTCTCACATCAAGCACGGGACGGGCGACAAACACGGCGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS GCA 72 bp AGTTGTGCAGCTTGGAGGGACAGCTGCGGCAGAAGTTaGCCCCGGACCGGTCCTCCCACTCCACGTTGGTCA +
Preference number: 6 (lower is better)
Translates to: SCAAWRDSCGRS*PRTGPPTPRWS
Trigger: TGACCAACGTGGAGTGGGAGGACCGGTCCGGGGGCAACTTCTGCCGCAGCTGTCCCTCCAAGCTGCACAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp CCTCCGCGGTTGCAGTCTGCGGAGAGGGGTGGCCGGTaGCTGGGAATGGAGGGTTTTCCTTTCCTGCAAAGC +
Preference number: 6 (lower is better)
Translates to: PPRLQSAERGGR*LGMEGFPFLQS
Trigger: GCTTTGCAGGAAAGGAAAACCCTCCATTCCCAGCCACCGGCCACCCCTCTCCGCAGACTGCAACCGCGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 72 bp AGAAGTTGCCCCCGGACCGGTCCTCCCACTCCACGTTaGTCAGGTTCTTCTCCCAAGGTGCAGGTACCCCGC +
Preference number: 6 (lower is better)
Translates to: RSCPRTGPPTPR*SGSSPKVQVPR
Trigger: GCGGGGTACCTGCACCTTGGGAGAAGAACCTGACCAACGTGGAGTGGGAGGACCGGTCCGGGGGCAACTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp TCTGACCCGTCACCGTCGTGGAGTAGTTGTGCAGCTTaGAGGGACAGCTGCGGCAGAAGTTGCCCCCGGACC +
Preference number: 6 (lower is better)
Translates to: SDPSPSWSSCAA*RDSCGRSCPRT
Trigger: GGTCCGGGGGCAACTTCTGCCGCAGCTGTCCCTCCAAGCTGCACAACTACTCCACGACGGTGACGGGTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp GAGGCGTTTGACGTCACCGCCACTGGGGCAGCCGGCTaGTCCAGTTCCTGCAGGGAGTTGTCCTCACTGATG +
Preference number: 6 (lower is better)
Translates to: EAFDVTATGAAG*SSSCRELSSLM
Trigger: CATCAGTGAGGACAACTCCCTGCAGGAACTGGACCAGCCGGCTGCCCCAGTGGCGGTGACGTCAAACGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CAA 72 bp TGCTTGGAGGAGGGGAGGCCGATGTCCAGGGGCTTCTaGCTGATGGACCTGGACTGGGTGGTGAAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: CLEEGRPMSRGF*LMDLDWVVKGG
Trigger: CCCACCCTTCACCACCCAGTCCAGGTCCATCAGCAAGAAGCCCCTGGACATCGGCCTCCCCTCCTCCAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CAA 72 bp CAGAAGTTGCCCCCGGACCGGTCCTCCCACTCCACGTaGGTCAGGTTCTTCTCCCAAGGTGCAGGTACCCCG +
Preference number: 6 (lower is better)
Translates to: QKLPPDRSSHST*VRFFSQGAGTP
Trigger: CGGGGTACCTGCACCTTGGGAGAAGAACCTGACCAACGTGGAGTGGGAGGACCGGTCCGGGGGCAACTTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CAA 90 bp AGCTGGCTGTGCTTGGAGGAGGGGAGGCCGATGTCCAGGGGCTTCTaGCTGATGGACCTGGACTGGGTGGTGAAGGGTGGGTTGTCACAG +
Preference number: 6 (lower is better)
Translates to: SWLCLEEGRPMSRGF*LMDLDWVVKGGLSQ
Trigger: CTGTGACAACCCACCCTTCACCACCCAGTCCAGGTCCATCAGCAAGAAGCCCCTGGACATCGGCCTCCCCTCCTCCAAGCACAGCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 72 bp GCCTGGCTTTCGACGCCCCCGCCACCGTGGGCTGCCTaGAGAAGTAGGATTTGCTGCCATGGAGCAAGCACT +
Preference number: 6 (lower is better)
Translates to: AWLSTPPPPWAA*RSRICCHGAST
Trigger: AGTGCTTGCTCCATGGCAGCAAATCCTACTTCTTCAGGCAGCCCACGGTGGCGGGGGCGTCGAAAGCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp CGCGGTTGCAGTCTGCGGAGAGGGGTGGCCGGTGGCTaGGAATGGAGGGTTTTCCTTTCCTGCAAAGCAGGA +
Preference number: 6 (lower is better)
Translates to: RGCSLRRGVAGG*EWRVFLSCKAG
Trigger: TCCTGCTTTGCAGGAAAGGAAAACCCTCCATTCCCAGCCACCGGCCACCCCTCTCCGCAGACTGCAACCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 72 bp CCGCAGGCACTGTGTCTGTATCCCCTGCCACCAGACTaGGCACGATCCACGTGTAGCCATAGCCAGTCAGCC +
Preference number: 6 (lower is better)
Translates to: PQALCLYPLPPD*ARSTCSHSQSA
Trigger: GGCTGACTGGCTATGGCTACACGTGGATCGTGCCCAGTCTGGTGGCAGGGGATACAGACACAGTGCCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 72 bp AGAAGCTGGGGGCCGGCTCCGTCCCTCGGTGGAGCATaGTCATTCCCAAAGCGTCCCCTTCTTAACTCGCCA +
Preference number: 6 (lower is better)
Translates to: RSWGPAPSLGGA*SFPKRPLLNSP
Trigger: TGGCGAGTTAAGAAGGGGACGCTTTGGGAATGACCATGCTCCACCGAGGGACGGAGCCGGCCCCCAGCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681855.1
CDS TCA 72 bp CTGAGCATGTACCCGCCGCCGGGGTTGTTGTGGTGGTaGTGTCCGGCAGTGGGCACTGAGGACTTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: LSMYPPPGLLWW*CPAVGTEDLLL
Trigger: CAACAACAAGTCCTCAGTGCCCACTGCCGGACATCACCACCACAACAACCCCGGCGGCGGGTACATGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS GCA 72 bp CTTTCTTGCAAGCCTCACACCGGATGCACGCCTGCCTaGCCGAGTTCTGACCCGTCACCGTCGTGGAGTAGT +
Preference number: 6 (lower is better)
Translates to: LSCKPHTGCTPA*PSSDPSPSWSS
Trigger: ACTACTCCACGACGGTGACGGGTCAGAACTCGGGCAGGCAGGCGTGCATCCGGTGTGAGGCTTGCAAGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS GCA 72 bp GTCACCGCCACTGGGGCAGCCGGCTGGTCCAGTTCCTaGAGGGAGTTGTCCTCACTGATGTCATACAGGTTG +
Preference number: 6 (lower is better)
Translates to: VTATGAAGWSSS*RELSSLMSYRL
Trigger: CAACCTGTATGACATCAGTGAGGACAACTCCCTGCAGGAACTGGACCAGCCGGCTGCCCCAGTGGCGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp CGCCGCCGGGGTTGTTGTGGTGGTGATGTCCGGCAGTaGGCACTGAGGACTTGTTGTTGGCAAAGGTGCTCT +
Preference number: 6 (lower is better)
Translates to: RRRGCCGGDVRQ*ALRTCCWQRCS
Trigger: AGAGCACCTTTGCCAACAACAAGTCCTCAGTGCCCACTGCCGGACATCACCACCACAACAACCCCGGCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp CTGGTTCCCTATACAGATGTCCTTCTGGAAACGGGCTaGCACGGCCCCATGAAGGGCCGAGACCACCGGCTT +
Preference number: 6 (lower is better)
Translates to: LVPYTDVLLETG*HGPMKGRDHRL
Trigger: AAGCCGGTGGTCTCGGCCCTTCATGGGGCCGTGCCAGCCCGTTTCCAGAAGGACATCTGTATAGGGAACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CAA 72 bp GCCATGTTCTTGGCCGTGCGCAGCAGGCGCAGGATGTaGGAGTGTGTGTTGTTCATGGTTGCGGTGGGGGAG +
Preference number: 6 (lower is better)
Translates to: AMFLAVRSRRRM*ECVLFMVAVGE
Trigger: CTCCCCCACCGCAACCATGAACAACACACACTCCAACATCCTGCGCCTGCTGCGCACGGCCAAGAACATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CAA 90 bp CCGTGCGCAGCAGGCGCAGGATGTTGGAGTGTGTGTTGTTCATGGTaGCGGTGGGGGAGTTCATTACAGACTGGCGCTCCTCGATCGCCA +
Preference number: 6 (lower is better)
Translates to: PCAAGAGCWSVCCSW*RWGSSLQTGAPRSP
Trigger: TGGCGATCGAGGAGCGCCAGTCTGTAATGAACTCCCCCACCGCAACCATGAACAACACACACTCCAACATCCTGCGCCTGCTGCGCACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 72 bp GGGGTTGTTGTGGTGGTGATGTCCGGCAGTGGGCACTaGGGACTTGTTGTTGGCAAAGGTGCTCTCGCCAGC +
Preference number: 6 (lower is better)
Translates to: GVVVVVMSGSGH*GLVVGKGALAS
Trigger: GCTGGCGAGAGCACCTTTGCCAACAACAAGTCCTCAGTGCCCACTGCCGGACATCACCACCACAACAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS GCA 72 bp ACGGATGACTCCCGTCGGATGAAGTCCAGGGCGCTCTaGGGTGAGCCATTCACACCAGACAGGTTAGCCATG +
Preference number: 6 (lower is better)
Translates to: TDDSRRMKSRAL*GEPFTPDRLAM
Trigger: CATGGCTAACCTGTCTGGTGTGAATGGCTCACCGCAGAGCGCCCTGGACTTCATCCGACGGGAGTCATCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp CCATGTTCTTGGCCGTGCGCAGCAGGCGCAGGATGTTaGAGTGTGTGTTGTTCATGGTTGCGGTGGGGGAGT +
Preference number: 6 (lower is better)
Translates to: PCSWPCAAGAGC*SVCCSWLRWGS
Trigger: ACTCCCCCACCGCAACCATGAACAACACACACTCCAACATCCTGCGCCTGCTGCGCACGGCCAAGAACATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CAA 90 bp GCGCTCTGCGGTGAGCCATTCACACCAGACAGGTTAGCCATGTTCTaGGCCGTGCGCAGCAGGCGCAGGATGTTGGAGTGTGTGTTGTTC +
Preference number: 6 (lower is better)
Translates to: ALCGEPFTPDRLAMF*AVRSRRRMLECVLF
Trigger: GAACAACACACACTCCAACATCCTGCGCCTGCTGCGCACGGCCAAGAACATGGCTAACCTGTCTGGTGTGAATGGCTCACCGCAGAGCGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CAA 90 bp ATGTTCTTGGCCGTGCGCAGCAGGCGCAGGATGTTGGAGTGTGTGTaGTTCATGGTTGCGGTGGGGGAGTTCATTACAGACTGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: MFLAVRSRRRMLECV*FMVAVGEFITDWRS
Trigger: GGAGCGCCAGTCTGTAATGAACTCCCCCACCGCAACCATGAACAACACACACTCCAACATCCTGCGCCTGCTGCGCACGGCCAAGAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 72 bp GCTCTGAGATGTCATAGACGGATGACTCCCGTCGGATaGAGTCCAGGGCGCTCTGCGGTGAGCCATTCACAC +
Preference number: 6 (lower is better)
Translates to: ALRCHRRMTPVG*SPGRSAVSHSH
Trigger: GTGTGAATGGCTCACCGCAGAGCGCCCTGGACTTCATCCGACGGGAGTCATCCGTCTATGACATCTCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 72 bp GCCTCTTGGCGGCATTGCCCTCGATGTTCCCATAGGTaGCGGTGTGGGTTGAGATGTCAGAGACATCGGAGC +
Preference number: 6 (lower is better)
Translates to: ASWRHCPRCSHR*RCGLRCQRHRS
Trigger: GCTCCGATGTCTCTGACATCTCAACCCACACCGTCACCTATGGGAACATCGAGGGCAATGCCGCCAAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp CTGACACGGCCAGGACGGCCAACACCAACCAGAACTTaGGAGAACAGCACTCCGCTCTGGGCTTCATCTTCA +
Preference number: 6 (lower is better)
Translates to: LTRPGRPTPTRT*ENSTPLWASSS
Trigger: TGAAGATGAAGCCCAGAGCGGAGTGCTGTTCTCCCAAGTTCTGGTTGGTGTTGGCCGTCCTGGCCGTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000609686.4
ENST00000627535.2
ENST00000630791.2
CDS CCA 72 bp TTGTTCATGGTTGCGGTGGGGGAGTTCATTACAGACTaGCGCTCCTCGATCGCCACCCCATGGATGCAGCTG +
Preference number: 6 (lower is better)
Translates to: LFMVAVGEFITD*RSSIATPWMQL
Trigger: CAGCTGCATCCATGGGGTGGCGATCGAGGAGCGCCAGTCTGTAATGAACTCCCCCACCGCAACCATGAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp GTGGGTTGTCACAGTCGTAGAGCCCATCGATGGAGCTaGCACTGCCAATACTATGGGGCCGGTGGTGATGGT +
Preference number: 6 (lower is better)
Translates to: VGCHSRRAHRWS*HCQYYGAGGDG
Trigger: ACCATCACCACCGGCCCCATAGTATTGGCAGTGCCAGCTCCATCGATGGGCTCTACGACTGTGACAACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CAA 72 bp GCCGTGCGCAGCAGGCGCAGGATGTTGGAGTGTGTGTaGTTCATGGTTGCGGTGGGGGAGTTCATTACAGAC +
Preference number: 6 (lower is better)
Translates to: AVRSRRRMLECV*FMVAVGEFITD
Trigger: GTCTGTAATGAACTCCCCCACCGCAACCATGAACAACACACACTCCAACATCCTGCGCCTGCTGCGCACGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CAA 72 bp GGTGAGCCATTCACACCAGACAGGTTAGCCATGTTCTaGGCCGTGCGCAGCAGGCGCAGGATGTTGGAGTGT +
Preference number: 6 (lower is better)
Translates to: GEPFTPDRLAMF*AVRSRRRMLEC
Trigger: ACACTCCAACATCCTGCGCCTGCTGCGCACGGCCAAGAACATGGCTAACCTGTCTGGTGTGAATGGCTCACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 72 bp CACTCTGGCGGGGAGGCCATAGTCCCATTCATCATATaGTACAGAGATGAGCCCAGTGGGGAACTCCGCAGG +
Preference number: 6 (lower is better)
Translates to: HSGGEAIVPFII*YRDEPSGELRR
Trigger: CCTGCGGAGTTCCCCACTGGGCTCATCTCTGTATCATATGATGAATGGGACTATGGCCTCCCCGCCAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS TCA 72 bp ACATCTCAAACATGTGGGCGTAGGGGCTCCCATCCATaGATCGGCCCTTGTCTTTCAGGCTTACGCTGCGCG +
Preference number: 6 (lower is better)
Translates to: TSQTCGRRGSHP*IGPCLSGLRCA
Trigger: CGCGCAGCGTAAGCCTGAAAGACAAGGGCCGATTCATGGATGGGAGCCCCTACGCCCACATGTTTGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS GCA 72 bp CAGGCGCAGGATGTTGGAGTGTGTGTTGTTCATGGTTaGGGTGGGGGAGTTCATTACAGACTGGCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: QAQDVGVCVVHG*GGGVHYRLALL
Trigger: GAGGAGCGCCAGTCTGTAATGAACTCCCCCACCGCAACCATGAACAACACACACTCCAACATCCTGCGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS GCA 72 bp CGGCAGTGGGCACTGAGGACTTGTTGTTGGCAAAGGTaGTCTCGCCAGCTGACATCTCAAACATGTGGGCGT +
Preference number: 6 (lower is better)
Translates to: RQWALRTCCWQR*SRQLTSQTCGR
Trigger: ACGCCCACATGTTTGAGATGTCAGCTGGCGAGAGCACCTTTGCCAACAACAAGTCCTCAGTGCCCACTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp GCTACCAGTTCCACCCGGGGTACCACGGAGAGATGGTaGAAATCATCTTTCTCGTGGGCATCCTTGATGGCC +
Preference number: 6 (lower is better)
Translates to: ATSSTRGTTERW*KSSFSWASLMA
Trigger: GGCCATCAAGGATGCCCACGAGAAAGATGATTTCCACCATCTCTCCGTGGTACCCCGGGTGGAACTGGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 72 bp GCAGCAGGCGCAGGATGTTGGAGTGTGTGTTGTTCATaGTTGCGGTGGGGGAGTTCATTACAGACTGGCGCT +
Preference number: 6 (lower is better)
Translates to: AAGAGCWSVCCS*LRWGSSLQTGA
Trigger: AGCGCCAGTCTGTAATGAACTCCCCCACCGCAACCATGAACAACACACACTCCAACATCCTGCGCCTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp CTTCTTGCTGATGGACCTGGACTGGGTGGTGAAGGGTaGGTTGTCACAGTCGTAGAGCCCATCGATGGAGCT +
Preference number: 6 (lower is better)
Translates to: LLADGPGLGGEG*VVTVVEPIDGA
Trigger: AGCTCCATCGATGGGCTCTACGACTGTGACAACCCACCCTTCACCACCCAGTCCAGGTCCATCAGCAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CAA 72 bp GCAGGCGCAGGATGTTGGAGTGTGTGTTGTTCATGGTaGCGGTGGGGGAGTTCATTACAGACTGGCGCTCCT +
Preference number: 6 (lower is better)
Translates to: AGAGCWSVCCSW*RWGSSLQTGAP
Trigger: AGGAGCGCCAGTCTGTAATGAACTCCCCCACCGCAACCATGAACAACACACACTCCAACATCCTGCGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CAA 90 bp GGTACCACGGAGAGATGGTGGAAATCATCTTTCTCGTGGGCATCCTaGATGGCCACCTCGTCGGAAGTGCCCACGAGGATGACAGCAATG +
Preference number: 6 (lower is better)
Translates to: GTTERWWKSSFSWAS*MATSSEVPTRMTAM
Trigger: CATTGCTGTCATCCTCGTGGGCACTTCCGACGAGGTGGCCATCAAGGATGCCCACGAGAAAGATGATTTCCACCATCTCTCCGTGGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CAA 90 bp GACAGGTTAGCCATGTTCTTGGCCGTGCGCAGCAGGCGCAGGATGTaGGAGTGTGTGTTGTTCATGGTTGCGGTGGGGGAGTTCATTACA +
Preference number: 6 (lower is better)
Translates to: DRLAMFLAVRSRRRM*ECVLFMVAVGEFIT
Trigger: TGTAATGAACTCCCCCACCGCAACCATGAACAACACACACTCCAACATCCTGCGCCTGCTGCGCACGGCCAAGAACATGGCTAACCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 72 bp AGGGCGGGTTGTTGTAGGATTTGCAGTCAGAATGCGTaGAGCTGCGGCGGTGCTCTGAGATGTCATAGACGG +
Preference number: 6 (lower is better)
Translates to: RAGCCRICSQNA*SCGGALRCHRR
Trigger: CCGTCTATGACATCTCAGAGCACCGCCGCAGCTTCACGCATTCTGACTGCAAATCCTACAACAACCCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 72 bp CGGTTCTTCTTCTGGGCCTTGGAATTAGTCGGGCTCTaGGGGTACTTAGTGGTGGAGGCGTTTGACGTCACC +
Preference number: 6 (lower is better)
Translates to: RFFFWALELVGL*GYLVVEAFDVT
Trigger: GGTGACGTCAAACGCCTCCACCACTAAGTACCCTCAGAGCCCGACTAATTCCAAGGCCCAGAAGAAGAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS GCA 72 bp CAGGGAGTTGTCCTCACTGATGTCATACAGGTTGCCTaGTTTCTTGCAAGCCTCACACCGGATGCACGCCTG +
Preference number: 6 (lower is better)
Translates to: QGVVLTDVIQVA*FLASLTPDARL
Trigger: CAGGCGTGCATCCGGTGTGAGGCTTGCAAGAAAGCAGGCAACCTGTATGACATCAGTGAGGACAACTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp GCTTCCTGGTCTGTGTCATCAGCAAACACCACCCCCTaGATCTTCCGGTCAGACATGAGATCACAGATGCGG +
Preference number: 6 (lower is better)
Translates to: ASWSVSSANTTP*IFRSDMRSQMR
Trigger: CCGCATCTGTGATCTCATGTCTGACCGGAAGATCCAGGGGGTGGTGTTTGCTGATGACACAGACCAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 72 bp GCAGGATGTTGGAGTGTGTGTTGTTCATGGTTGCGGTaGGGGAGTTCATTACAGACTGGCGCTCCTCGATCG +
Preference number: 6 (lower is better)
Translates to: AGCWSVCCSWLR*GSSLQTGAPRS
Trigger: CGATCGAGGAGCGCCAGTCTGTAATGAACTCCCCCACCGCAACCATGAACAACACACACTCCAACATCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp GGTGATGTCCGGCAGTGGGCACTGAGGACTTGTTGTTaGCAAAGGTGCTCTCGCCAGCTGACATCTCAAACA +
Preference number: 6 (lower is better)
Translates to: GDVRQWALRTCC*QRCSRQLTSQT
Trigger: TGTTTGAGATGTCAGCTGGCGAGAGCACCTTTGCCAACAACAAGTCCTCAGTGCCCACTGCCGGACATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CAA 72 bp GAGAGATGGTGGAAATCATCTTTCTCGTGGGCATCCTaGATGGCCACCTCGTCGGAAGTGCCCACGAGGATG +
Preference number: 6 (lower is better)
Translates to: ERWWKSSFSWAS*MATSSEVPTRM
Trigger: CATCCTCGTGGGCACTTCCGACGAGGTGGCCATCAAGGATGCCCACGAGAAAGATGATTTCCACCATCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CAA 90 bp GGTACGGAGTTGTTAAACACCAGACCCCAGAGCAACCAAATAGCTTaGCCGATGGTGAAAGAGGGTCCACCAGGCTCTCTGCCATCAGCG +
Preference number: 6 (lower is better)
Translates to: GTELLNTRPQSNQIA*PMVKEGPPGSLPSA
Trigger: CGCTGATGGCAGAGAGCCTGGTGGACCCTCTTTCACCATCGGCAAAGCTATTTGGTTGCTCTGGGGTCTGGTGTTTAACAACTCCGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 72 bp GGAGGCCATAGTCCCATTCATCATATGATACAGAGATaGGCCCAGTGGGGAACTCCGCAGGCACTGTGTCTG +
Preference number: 6 (lower is better)
Translates to: GGHSPIHHMIQR*AQWGTPQALCL
Trigger: CAGACACAGTGCCTGCGGAGTTCCCCACTGGGCTCATCTCTGTATCATATGATGAATGGGACTATGGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS TCA 72 bp ATTGCCCTCGATGTTCCCATAGGTGACGGTGTGGGTTaGGATGTCAGAGACATCGGAGCGGATCAAGTCGTC +
Preference number: 6 (lower is better)
Translates to: IALDVPIGDGVG*DVRDIGADQVV
Trigger: GACGACTTGATCCGCTCCGATGTCTCTGACATCTCAACCCACACCGTCACCTATGGGAACATCGAGGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS TCA 72 bp GTAGATGTCGGTCAGGTCTACGTGCTCCCAGTGGGGTaGGTTCTCCTTTGTTCGGAACTGGTCCAGGTAGAA +
Preference number: 6 (lower is better)
Translates to: VDVGQVYVLPVG*VLLCSELVQVE
Trigger: TTCTACCTGGACCAGTTCCGAACAAAGGAGAACTCACCCCACTGGGAGCACGTAGACCTGACCGACATCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp GCTGAAATGAAATCGAGGATCTGGGCGATGGCTTCCTaGTCTGTGTCATCAGCAAACACCACCCCCTGGATC +
Preference number: 6 (lower is better)
Translates to: AEMKSRIWAMAS*SVSSANTTPWI
Trigger: GATCCAGGGGGTGGTGTTTGCTGATGACACAGACCAGGAAGCCATCGCCCAGATCCTCGATTTCATTTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 72 bp TCATCCTTATCTGCCATTATCATAGAGGAGCCCCCGTaGATGCCCAGGATGGGGGTGAGAGTCTGTGCTGAA +
Preference number: 6 (lower is better)
Translates to: SSLSAIIIEEPP*MPRMGVRVCAE
Trigger: TTCAGCACAGACTCTCACCCCCATCCTGGGCATCCACGGGGGCTCCTCTATGATAATGGCAGATAAGGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS TCA 72 bp CAGCACTACTGGATGGTGGTGATCAAGAATCACCCTTaGCGAGCACTCTCGATAGAGCGAAGCCCCGAGATT +
Preference number: 6 (lower is better)
Translates to: QHYWMVVIKNHP*RALSIERSPEI
Trigger: AATCTCGGGGCTTCGCTCTATCGAGAGTGCTCGTCAAGGGTGATTCTTGATCACCACCATCCAGTAGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS TCA 72 bp CACGATCCACGTGTAGCCATAGCCAGTCAGCCCTACTaGGTTGGCCACTTCAAAGATGTAGGTGGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: HDPRVAIASQPY*VGHFKDVGGFF
Trigger: GAAGAAGCCACCTACATCTTTGAAGTGGCCAACTCAGTAGGGCTGACTGGCTATGGCTACACGTGGATCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS TCA 72 bp AGCTGTGCTCAGACAGCATGTCAGAAGCAGCAGTGGTaGTTATGGCAATTCCATCTCTCACTCTGGCGGGGA +
Preference number: 6 (lower is better)
Translates to: SCAQTACQKQQW*LWQFHLSLWRG
Trigger: TCCCCGCCAGAGTGAGAGATGGAATTGCCATAATCACCACTGCTGCTTCTGACATGCTGTCTGAGCACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS TCA 72 bp CGTGGGTGTTGTAACAACTGCTTTTGGGCTCAGGGATaGAGCTGTGCTCAGACAGCATGTCAGAAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: RGCCNNCFWAQG*SCAQTACQKQQ
Trigger: CTGCTGCTTCTGACATGCTGTCTGAGCACAGCTTCATCCCTGAGCCCAAAAGCAGTTGTTACAACACCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 72 bp ACACCAACCAGAACTTGGGAGAACAGCACTCCGCTCTaGGCTTCATCTTCAACTCGTCGACTCCCTTGGTTT +
Preference number: 6 (lower is better)
Translates to: TPTRTWENSTPL*ASSSTRRLPWF
Trigger: AAACCAAGGGAGTCGACGAGTTGAAGATGAAGCCCAGAGCGGAGTGCTGTTCTCCCAAGTTCTGGTTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000609686.4
ENST00000627535.2
ENST00000630791.2
CDS CCA 72 bp AGACATGAGATCACAGATGCGGGTGATGATGCTCTTTaGGTCGGTCTCATTCATGGCTACCAGTTCCACCCG +
Preference number: 6 (lower is better)
Translates to: RHEITDAGDDAL*VGLIHGYQFHP
Trigger: CGGGTGGAACTGGTAGCCATGAATGAGACCGACCCAAAGAGCATCATCACCCGCATCTGTGATCTCATGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 72 bp GGGGTGAGAGTCTGTGCTGAAATGAAATCGAGGATCTaGGCGATGGCTTCCTGGTCTGTGTCATCAGCAAAC +
Preference number: 6 (lower is better)
Translates to: GVRVCAEMKSRI*AMASWSVSSAN
Trigger: GTTTGCTGATGACACAGACCAGGAAGCCATCGCCCAGATCCTCGATTTCATTTCAGCACAGACTCTCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 72 bp TCCACGTGTAGCCATAGCCAGTCAGCCCTACTGAGTTaGCCACTTCAAAGATGTAGGTGGCTTCTTCCTTGG +
Preference number: 6 (lower is better)
Translates to: STCSHSQSALLS*PLQRCRWLLPW
Trigger: CCAAGGAAGAAGCCACCTACATCTTTGAAGTGGCCAACTCAGTAGGGCTGACTGGCTATGGCTACACGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 72 bp CCATCTCCAAAGAGCTGCAGGATAGCAAGGTCCACCTaGCGCTTCCACCCAGAATCTTTTTGGATGGCAATG +
Preference number: 6 (lower is better)
Translates to: PSPKSCRIARST*RFHPESFWMAM
Trigger: CATTGCCATCCAAAAAGATTCTGGGTGGAAGCGCCAGGTGGACCTTGCTATCCTGCAGCTCTTTGGAGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000628166.2
CDS CAA 72 bp GAGGTGGTCCCCTTTGGGTTCTGCACAGGTACGGAGTaGTTAAACACCAGACCCCAGAGCAACCAAATAGCT +
Preference number: 6 (lower is better)
Translates to: EVVPFGFCTGTE*LNTRPQSNQIA
Trigger: AGCTATTTGGTTGCTCTGGGGTCTGGTGTTTAACAACTCCGTACCTGTGCAGAACCCAAAGGGGACCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000628166.2
CDS CAA 72 bp AGCAAGGTCCACCTGGCGCTTCCACCCAGAATCTTTTaGGATGGCAATGCCATAGCCAGTGGAAGCAAAGAC +
Preference number: 6 (lower is better)
Translates to: SKVHLALPPRIF*DGNAIASGSKD
Trigger: GTCTTTGCTTCCACTGGCTATGGCATTGCCATCCAAAAAGATTCTGGGTGGAAGCGCCAGGTGGACCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000628166.2
CDS CAA 90 bp ATGATCTTGGAGGTGGTCCCCTTTGGGTTCTGCACAGGTACGGAGTaGTTAAACACCAGACCCCAGAGCAACCAAATAGCTTTGCCGATG +
Preference number: 6 (lower is better)
Translates to: MILEVVPFGFCTGTE*LNTRPQSNQIALPM
Trigger: CATCGGCAAAGCTATTTGGTTGCTCTGGGGTCTGGTGTTTAACAACTCCGTACCTGTGCAGAACCCAAAGGGGACCACCTCCAAGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000628166.2
CDS GCA 72 bp CCTCTAGCTCCCAGCCCACAAAGCTATTCTCAATGGTaGTGCGGATCTTGTTTACAAAGTCCTGGTAGCCAG +
Preference number: 6 (lower is better)
Translates to: PLAPSPQSYSQW*CGSCLQSPGSQ
Trigger: CTGGCTACCAGGACTTTGTAAACAAGATCCGCAGCACCATTGAGAATAGCTTTGTGGGCTGGGAGCTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 72 bp CCTCCTCTAGCTCCCAGCCCACAAAGCTATTCTCAATaGTGCTGCGGATCTTGTTTACAAAGTCCTGGTAGC +
Preference number: 6 (lower is better)
Translates to: PPLAPSPQSYSQ*CCGSCLQSPGS
Trigger: GCTACCAGGACTTTGTAAACAAGATCCGCAGCACCATTGAGAATAGCTTTGTGGGCTGGGAGCTAGAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CAA 72 bp TTGTTAAACACCAGACCCCAGAGCAACCAAATAGCTTaGCCGATGGTGAAAGAGGGTCCACCAGGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: LLNTRPQSNQIA*PMVKEGPPGSL
Trigger: CAGAGAGCCTGGTGGACCCTCTTTCACCATCGGCAAAGCTATTTGGTTGCTCTGGGGTCTGGTGTTTAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609686.4
CDS CCA 72 bp AATGCTCAGATGGTCATCCTCCTGCTCTTCAGTCTCTaGACACATTCGGGGCCACACATAGTACTTCATCTG +
Preference number: 6 (lower is better)
Translates to: NAQMVILLLFSL*THSGPHIVLHL
Trigger: CAGATGAAGTACTATGTGTGGCCCCGAATGTGTCCAGAGACTGAAGAGCAGGAGGATGACCATCTGAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CAA 72 bp TTGTTAAACACCAGACCCCAGAGCAACCAAATAGCTTaGCCGATGGTGAAAGAGGGTCCACCAGGCTCTGTT +
Preference number: 6 (lower is better)
Translates to: LLNTRPQSNQIA*PMVKEGPPGSV
Trigger: AACAGAGCCTGGTGGACCCTCTTTCACCATCGGCAAAGCTATTTGGTTGCTCTGGGGTCTGGTGTTTAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628166.2
CDS GCA 72 bp GAAGGCATCCAGTTTCCCTGTTTTCAGGGAGAGCAATaGATCATCTACACCCCTCTGGTTGAACTTTCCCAT +
Preference number: 6 (lower is better)
Translates to: EGIQFPCFQGEQ*IIYTPLVELSH
Trigger: ATGGGAAAGTTCAACCAGAGGGGTGTAGATGATGCATTGCTCTCCCTGAAAACAGGGAAACTGGATGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000628166.2
CDS CAA 90 bp GTAGAAGCCAAACCTCTAGACGGACAGATTAAGGGAGTGAGCATGTaGGGAATGTCCAGTCCCTTCTTCTCGCTTGCATATCCACATAAG +
Preference number: 6 (lower is better)
Translates to: VEAKPLDGQIKGVSM*GMSSPFFSLAYPHK
Trigger: CTTATGTGGATATGCAAGCGAGAAGAAGGGACTGGACATTCCCAACATGCTCACTCCCTTAATCTGTCCGTCTAGAGGTTTGGCTTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000609686.4
ENST00000627535.2
ENST00000630791.2
ENST00000681855.1
CDS GCA 72 bp GAAGTTCATGACTCTTCTTTGCAAGGCAAAAGGATATaGATTCGGACGCCAGCACTACTGGATGGTGGTGAT +
Preference number: 6 (lower is better)
Translates to: EVHDSSLQGKRI*IRTPALLDGGD
Trigger: ATCACCACCATCCAGTAGTGCTGGCGTCCGAATGCATATCCTTTTGCCTTGCAAAGAAGAGTCATGAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CAA 72 bp AAACCTCTAGACGGACAGATTAAGGGAGTGAGCATGTaGGGAATGTCCAGTCCCTTCTTCTCGCTTGCATAT +
Preference number: 6 (lower is better)
Translates to: KPLDGQIKGVSM*GMSSPFFSLAY
Trigger: ATATGCAAGCGAGAAGAAGGGACTGGACATTCCCAACATGCTCACTCCCTTAATCTGTCCGTCTAGAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000609686.4
ENST00000627535.2
ENST00000630791.2
ENST00000681855.1
CDS TCA 72 bp CATGATGTTGAGCATTACGGAAGCTTGCTGTTCAATTaGTGGGCCAAACTGGAAGAACATGGAGGATTCATC +
Preference number: 6 (lower is better)
Translates to: HDVEHYGSLLFN*WAKLEEHGGFI
Trigger: GATGAATCCTCCATGTTCTTCCAGTTTGGCCCATCAATTGAACAGCAAGCTTCCGTAATGCTCAACATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CAA 90 bp GTGGTGACGATAGAAAAGATGTACCAGTCATATTCTTCCATGATGTaGAGCATTACGGAAGCTTGCTGTTCAATTGATGGGCCAAACTGG +
Preference number: 6 (lower is better)
Translates to: VVTIEKMYQSYSSMM*SITEACCSIDGPNW
Trigger: CCAGTTTGGCCCATCAATTGAACAGCAAGCTTCCGTAATGCTCAACATCATGGAAGAATATGACTGGTACATCTTTTCTATCGTCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CCA 72 bp ATTACGGAAGCTTGCTGTTCAATTGATGGGCCAAACTaGAAGAACATGGAGGATTCATCCTTATCTGCCATT +
Preference number: 6 (lower is better)
Translates to: ITEACCSIDGPN*KNMEDSSLSAI
Trigger: AATGGCAGATAAGGATGAATCCTCCATGTTCTTCCAGTTTGGCCCATCAATTGAACAGCAAGCTTCCGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2
CDS CAA 72 bp ATAGAAAAGATGTACCAGTCATATTCTTCCATGATGTaGAGCATTACGGAAGCTTGCTGTTCAATTGATGGG +
Preference number: 6 (lower is better)
Translates to: IEKMYQSYSSMM*SITEACCSIDG
Trigger: CCCATCAATTGAACAGCAAGCTTCCGTAATGCTCAACATCATGGAAGAATATGACTGGTACATCTTTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609686.4
ENST00000630791.2