RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRIN2A (Homo sapiens)

Ensembl gene IDs: ENSG00000183454

Ensembl transcript IDs: ENST00000330684.4, ENST00000396573.6, ENST00000461292.3, ENST00000463531.1, ENST00000535259.6, ENST00000562109.5, ENST00000566665.1, ENST00000566670.2, ENST00000566683.1, ENST00000568247.3, ENST00000636273.2, ENST00000637334.1, ENST00000637393.1, ENST00000674742.1, ENST00000675189.1, ENST00000675398.1, ENST00000676032.1

Found 2251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCTGAATAGGTGGGCATGTTGGAAAGGCAGCTTCTGCAGTGCGTaGAGTTCTGCCGGTATCGCTCGCTGGTCTCACTGTGCGGGGAAC +
Preference number: 1 (lower is better)
Translates to: GLNRWACWKGSFCSA*SSAGIARWSHCAGN
Trigger: GTTCCCCGCACAGTGAGACCAGCGAGCGATACCGGCAGAACTCCACGCACTGCAGAAGCTGCCTTTCCAACATGCCCACCTATTCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 90 bp GGGCATTGTTCTGTGCCCAGTCCTGCTGGTAGACCTGCTCCCCGGTaGCTGGGTTACCTGTCTCCTGAAGCATCTGGTCTTCATCGATGT +
Preference number: 1 (lower is better)
Translates to: GHCSVPSPAGRPAPR*LGYLSPEASGLHRC
Trigger: ACATCGATGAAGACCAGATGCTTCAGGAGACAGGTAACCCAGCCACCGGGGAGCAGGTCTACCAGCAGGACTGGGCACAGAACAATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 90 bp GTCATCCCTGTGGGAGTGGAGGAAAGGGTTATCGGAGGTGTGGTCTaGCAAGAGAGACTTGCTCCTCTTGCTGTCCTCCAGACCTTGGGG +
Preference number: 1 (lower is better)
Translates to: VIPVGVEERVIGGVV*QERLAPLAVLQTLG
Trigger: CCCCAAGGTCTGGAGGACAGCAAGAGGAGCAAGTCTCTCTTGCCAGACCACACCTCCGATAACCCTTTCCTCCACTCCCACAGGGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 90 bp GGGTCCGAGGGGCATCTCCCAATAACCAAGCGTTGGTCATCCCTGTaGGAGTGGAGGAAAGGGTTATCGGAGGTGTGGTCTGGCAAGAGA +
Preference number: 1 (lower is better)
Translates to: GSEGHLPITKRWSSL*EWRKGLSEVWSGKR
Trigger: TCTCTTGCCAGACCACACCTCCGATAACCCTTTCCTCCACTCCCACAGGGATGACCAACGCTTGGTTATTGGGAGATGCCCCTCGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR TCA 90 bp CACATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTaGCCTCAAGGACGACCGAAGATAGCTGTCATTCACCGCCTGGGA +
Preference number: 1 (lower is better)
Translates to: HIIVAPTVPGTVRCR*PQGRPKIAVIHRLG
Trigger: TCCCAGGCGGTGAATGACAGCTATCTTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 90 bp CGTTGGTCATCCCTGTGGGAGTGGAGGAAAGGGTTATCGGAGGTGTaGTCTGGCAAGAGAGACTTGCTCCTCTTGCTGTCCTCCAGACCT +
Preference number: 1 (lower is better)
Translates to: RWSSLWEWRKGLSEV*SGKRDLLLLLSSRP
Trigger: AGGTCTGGAGGACAGCAAGAGGAGCAAGTCTCTCTTGCCAGACCACACCTCCGATAACCCTTTCCTCCACTCCCACAGGGATGACCAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 90 bp GATGTTGGGGTGACTATTCTGGGCCCTTCGATCCAGGCTTCTCCATaGCTGGGTCTTGGGGCAGCAGAGGTACAGCATCCGGGAAATAAA +
Preference number: 1 (lower is better)
Translates to: DVGVTILGPSIQASP*LGLGAAEVQHPGNK
Trigger: TTTATTTCCCGGATGCTGTACCTCTGCTGCCCCAAGACCCAGCCATGGAGAAGCCTGGATCGAAGGGCCCAGAATAGTCACCCCAACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CCA 90 bp GAGGGGCATCTCCCAATAACCAAGCGTTGGTCATCCCTGTGGGAGTaGAGGAAAGGGTTATCGGAGGTGTGGTCTGGCAAGAGAGACTTG +
Preference number: 1 (lower is better)
Translates to: EGHLPITKRWSSLWE*RKGLSEVWSGKRDL
Trigger: CAAGTCTCTCTTGCCAGACCACACCTCCGATAACCCTTTCCTCCACTCCCACAGGGATGACCAACGCTTGGTTATTGGGAGATGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR GCA 90 bp GATAGTGAATCCTGGCGTATGGAATCCACGGATTTCTTCCACAGCTaGCGGGGTCTAGAGTTCGCTTTGGATTCTGTGCTCACGGCCACC +
Preference number: 1 (lower is better)
Translates to: DSESWRMESTDFFHS*RGLEFALDSVLTAT
Trigger: GGTGGCCGTGAGCACAGAATCCAAAGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATCCGTGGATTCCATACGCCAGGATTCACTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR GCA 90 bp AGTGGAGGAAAGGGTTATCGGAGGTGTGGTCTGGCAAGAGAGACTTaGTCCTCTTGCTGTCCTCCAGACCTTGGGGGAAAAGGGAGCTTT +
Preference number: 1 (lower is better)
Translates to: SGGKGYRRCGLARET*SSCCPPDLGGKGSF
Trigger: AAAGCTCCCTTTTCCCCCAAGGTCTGGAGGACAGCAAGAGGAGCAAGTCTCTCTTGCCAGACCACACCTCCGATAACCCTTTCCTCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 90 bp GTTGCCTCATCCCTCTGGGAGACTGGATTCTGGGATAGTGAATCCTaGCGTATGGAATCCACGGATTTCTTCCACAGCTGCCGGGGTCTA +
Preference number: 1 (lower is better)
Translates to: VASSLWETGFWDSES*RMESTDFFHSCRGL
Trigger: TAGACCCCGGCAGCTGTGGAAGAAATCCGTGGATTCCATACGCCAGGATTCACTATCCCAGAATCCAGTCTCCCAGAGGGATGAGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 90 bp AGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTaGCAGCCCCCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGC +
Preference number: 1 (lower is better)
Translates to: SPSITLTLPGGLCGI*QPPGFRGHQRKTES
Trigger: GCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGGGGGCTGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CCA 90 bp TCCCTGTGGCACGTGGCCCGATTTGACGTTTCTGAAATGTCAGAGTaGGCCATCTCTTCTGGAAGATACCTAGGGCTCTTTAGGGAGTGG +
Preference number: 1 (lower is better)
Translates to: SLWHVARFDVSEMSE*AISSGRYLGLFREW
Trigger: CCACTCCCTAAAGAGCCCTAGGTATCTTCCAGAAGAGATGGCCCACTCTGACATTTCAGAAACGTCAAATCGGGCCACGTGCCACAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 90 bp CTCTTTAGGGAGTGGGTCCTATTCTCTGCTGTTGCCTCATCCCTCTaGGAGACTGGATTCTGGGATAGTGAATCCTGGCGTATGGAATCC +
Preference number: 1 (lower is better)
Translates to: LFREWVLFSAVASSL*ETGFWDSESWRMES
Trigger: GGATTCCATACGCCAGGATTCACTATCCCAGAATCCAGTCTCCCAGAGGGATGAGGCAACAGCAGAGAATAGGACCCACTCCCTAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR TCA 90 bp ATCGCTCGCTGGTCTCACTGTGCGGGGAACCCTTGTCTTTCAAGGTaGAGTGCTTGGAGTAGAGTTTATACTGGTCGTTGTTGGAAAGCC +
Preference number: 1 (lower is better)
Translates to: IARWSHCAGNPCLSR*SAWSRVYTGRCWKA
Trigger: GGCTTTCCAACAACGACCAGTATAAACTCTACTCCAAGCACTTCACCTTGAAAGACAAGGGTTCCCCGCACAGTGAGACCAGCGAGCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 90 bp AAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGGTaGATTAAGGTCTGGAATGCACTGGAAGGGCAGAAGGTAGAAAGG +
Preference number: 1 (lower is better)
Translates to: KHPRLMRKWRRSLLG*IKVWNALEGQKVER
Trigger: CCTTTCTACCTTCTGCCCTTCCAGTGCATTCCAGACCTTAATCCACCCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CCA 90 bp GTCCTATTCTCTGCTGTTGCCTCATCCCTCTGGGAGACTGGATTCTaGGATAGTGAATCCTGGCGTATGGAATCCACGGATTTCTTCCAC +
Preference number: 1 (lower is better)
Translates to: VLFSAVASSLWETGF*DSESWRMESTDFFH
Trigger: GTGGAAGAAATCCGTGGATTCCATACGCCAGGATTCACTATCCCAGAATCCAGTCTCCCAGAGGGATGAGGCAACAGCAGAGAATAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR TCA 90 bp GGGGATCTCTGGCTCTTATTCCAGAGCTACTCAGGAGTTTCCCCTTaGAAGAAACCTAGAAATAAGTCAGCCCGGTCAGAGAATCGAGCC +
Preference number: 1 (lower is better)
Translates to: GDLWLLFQSYSGVSP*KKPRNKSARSENRA
Trigger: GGCTCGATTCTCTGACCGGGCTGACTTATTTCTAGGTTTCTTTCAAGGGGAAACTCCTGAGTAGCTCTGGAATAAGAGCCAGAGATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR TCA 90 bp CCTTTTCTTGAGGCACATGTCATAATGCAAGGCTGGGAGGAGGCATaGTTTGGCAAGGACTGGAGAACTGGTTGGAACCAGACAAAAGCC +
Preference number: 1 (lower is better)
Translates to: PFLEAHVIMQGWEEA*FGKDWRTGWNQTKA
Trigger: GGCTTTTGTCTGGTTCCAACCAGTTCTCCAGTCCTTGCCAAATCATGCCTCCTCCCAGCCTTGCATTATGACATGTGCCTCAAGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 90 bp TGCTCAGGGGCATGCCTGCAGGATATGTTAAACATTAGGCCATTCTaGGTACCTATAAAGCCCGGTGGAAGCGTTCCAGTTCAACACTCT +
Preference number: 1 (lower is better)
Translates to: CSGACLQDMLNIRPF*VPIKPGGSVPVQHS
Trigger: AGAGTGTTGAACTGGAACGCTTCCACCGGGCTTTATAGGTACCCAGAATGGCCTAATGTTTAACATATCCTGCAGGCATGCCCCTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 90 bp CCTTGGTTTTGTGGTTCTTACTGTTGTCAGGTTCCCTGTGGCACGTaGCCCGATTTGACGTTTCTGAAATGTCAGAGTGGGCCATCTCTT +
Preference number: 1 (lower is better)
Translates to: PWFCGSYCCQVPCGT*PDLTFLKCQSGPSL
Trigger: AAGAGATGGCCCACTCTGACATTTCAGAAACGTCAAATCGGGCCACGTGCCACAGGGAACCTGACAACAGTAAGAACCACAAAACCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 90 bp AAGTTGTCCTTGGTTTTGTGGTTCTTACTGTTGTCAGGTTCCCTGTaGCACGTGGCCCGATTTGACGTTTCTGAAATGTCAGAGTGGGCC +
Preference number: 1 (lower is better)
Translates to: KLSLVLWFLLLSGSL*HVARFDVSEMSEWA
Trigger: GGCCCACTCTGACATTTCAGAAACGTCAAATCGGGCCACGTGCCACAGGGAACCTGACAACAGTAAGAACCACAAAACCAAGGACAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR TCA 90 bp CTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTaGGTGGAAGATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACA +
Preference number: 1 (lower is better)
Translates to: LSGVCHAQHTPHKIP*VEDYGMKPCAKEPT
Trigger: TGTTGGCTCTTTTGCACACGGCTTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR CCA 90 bp GGGTATTTGGAGGCCACTGACCTTTTAAAGTTGTCCTTGGTTTTGTaGTTCTTACTGTTGTCAGGTTCCCTGTGGCACGTGGCCCGATTT +
Preference number: 1 (lower is better)
Translates to: GYLEATDLLKLSLVL*FLLLSGSLWHVARF
Trigger: AAATCGGGCCACGTGCCACAGGGAACCTGACAACAGTAAGAACCACAAAACCAAGGACAACTTTAAAAGGTCAGTGGCCTCCAAATACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR TCA 90 bp CTCCTTCTCACCATCTATAGTGTAGATCTTGTCTCTAGGGGAGCTTaGTTTGGTTTTCAGGTAGGTGCGCTCGACCTCACTACAGTCCTT +
Preference number: 1 (lower is better)
Translates to: LLLTIYSVDLVSRGA*FGFQVGALDLTTVL
Trigger: AAGGACTGTAGTGAGGTCGAGCGCACCTACCTGAAAACCAAATCAAGCTCCCCTAGAGACAAGATCTACACTATAGATGGTGAGAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR TCA 90 bp AGGTCAGGTGTACTTTCCCAAAGATGGAGCTATTCCATGCATCCTTaGGCTTTAAGGGAATCATCCCTGACACTTGCCCACATGCAAGAA +
Preference number: 1 (lower is better)
Translates to: RSGVLSQRWSYSMHP*ALRESSLTLAHMQE
Trigger: TTCTTGCATGTGGGCAAGTGTCAGGGATGATTCCCTTAAAGCTCAAGGATGCATGGAATAGCTCCATCTTTGGGAAAGTACACCTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR TCA 90 bp AATAGCAGAAATAATGCTGCTGTTAGGGGAAGGCTTTCTGACCGATaGAGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTG +
Preference number: 1 (lower is better)
Translates to: NSRNNAAVRGRLSDR*SQSKYNSHSPWRSL
Trigger: CAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACTTCATCGGTCAGAAAGCCTTCCCCTAACAGCAGCATTATTTCTGCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR TCA 90 bp ACCCATGGACAGAGACCCAACCGTTTGCATTCAAGTGTACCTATCTaGGGACTAGTTGGGTCCTTCTCAAGTGGGGAAAACCAATTAGAA +
Preference number: 1 (lower is better)
Translates to: THGQRPNRLHSSVPI*GLVGSFSSGENQLE
Trigger: TTCTAATTGGTTTTCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATAGGTACACTTGAATGCAAACGGTTGGGTCTCTGTCCATGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR GCA 90 bp GCATCCTGTGAATCAGGGAAGAGAAAATCAAGAGTAATCCGTGGATaGCCAGTCATGGTGCTGGCTAAAATAACGCAGAGAGATTTGCAG +
Preference number: 1 (lower is better)
Translates to: ASCESGKRKSRVIRG*PVMVLAKITQRDLQ
Trigger: CTGCAAATCTCTCTGCGTTATTTTAGCCAGCACCATGACTGGGCATCCACGGATTACTCTTGATTTTCTCTTCCCTGATTCACAGGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 90 bp AGTAGGCATGTCCCGGAGACTTGCCCTTATGTAGTTAGTTATTTTTaGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACA +
Preference number: 1 (lower is better)
Translates to: SRHVPETCPYVVSYF*LRTHLSGVCHAQHT
Trigger: TGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAACTAACTACATAAGGGCAAGTCTCCGGGACATGCCTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR CCA 90 bp AGTCCATTCTTGAGGAGTTCATGTTGGACATGCTGGAAATGTTTTTaGCTGACCGGAGGAGTTTTAACATGTTGCTCTGGGATCCCGTCA +
Preference number: 1 (lower is better)
Translates to: SPFLRSSCWTCWKCF*LTGGVLTCCSGIPS
Trigger: TGACGGGATCCCAGAGCAACATGTTAAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCATGTCCAACATGAACTCCTCAAGAATGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR TCA 90 bp TGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGAGGGTaGGAGAAACACACATCAACATCCAAAGAGATTCCTGTAGCTCTC +
Preference number: 1 (lower is better)
Translates to: CVSLCSSEQDHRSRG*EKHTSTSKEIPVAL
Trigger: GAGAGCTACAGGAATCTCTTTGGATGTTGATGTGTGTTTCTCTCACCCTCGGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR GCA 90 bp GACTTGCCAGCTCAGAGCATTGAAACCATAAGTGGCCTAAGAACCTaGAGATGTAAGGATGATGAAACCCATTTTCCAGAAGCACAAAGG +
Preference number: 1 (lower is better)
Translates to: DLPAQSIETISGLRT*RCKDDETHFPEAQR
Trigger: CCTTTGTGCTTCTGGAAAATGGGTTTCATCATCCTTACATCTGCAGGTTCTTAGGCCACTTATGGTTTCAATGCTCTGAGCTGGCAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATaGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAA +
Preference number: 1 (lower is better)
Translates to: PCSAHTSQDSLSGRL*HEAVCKRANNNNNK
Trigger: TTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR CCA 90 bp AAATTCCCCTTATCTGAAACCATGTCCATGATGAGGGAACCTCTTTaGATGAAGTCAGCAGCTCTTTTGGGTGAGTCCATTCTTGAGGAG +
Preference number: 1 (lower is better)
Translates to: KFPLSETMSMMREPL*MKSAALLGESILEE
Trigger: CTCCTCAAGAATGGACTCACCCAAAAGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCATCATGGACATGGTTTCAGATAAGGGGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR TCA 90 bp CTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATaGAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACC +
Preference number: 1 (lower is better)
Translates to: LSTHLTRFLEWKIMA*SRVQKSQQQQQQNT
Trigger: GGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR TCA 90 bp CCCCCACAATCCCAAACTGGCTTTCAAAATAAAGTGGACATTCAGTaGAGTCCTATTAGCTGGTCAATGTGCTTGGTTCTTCCTCAATGC +
Preference number: 1 (lower is better)
Translates to: PPQSQTGFQNKVDIQ*SPISWSMCLVLPQC
Trigger: GCATTGAGGAAGAACCAAGCACATTGACCAGCTAATAGGACTTCACTGAATGTCCACTTTATTTTGAAAGCCAGTTTGGGATTGTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 90 bp TACCCAGAGTATTTTAAATTGGTTGCATGTGCGTGCTATTACCCATaGACAGAGACCCAACCGTTTGCATTCAAGTGTACCTATCTGAGG +
Preference number: 1 (lower is better)
Translates to: YPEYFKLVACACYYP*TETQPFAFKCTYLR
Trigger: CCTCAGATAGGTACACTTGAATGCAAACGGTTGGGTCTCTGTCCATGGGTAATAGCACGCACATGCAACCAATTTAAAATACTCTGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR GCA 90 bp ACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAAGCCGTGTaGAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATC +
Preference number: 1 (lower is better)
Translates to: TSQDSLSGRLWHEAV*KRANNNNNKIPPYI
Trigger: GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR GCA 90 bp TGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTaGCCTTATGTAGTTAGTTATTTTTGGTTAAGGACTCACCTATCT +
Preference number: 1 (lower is better)
Translates to: CIIIANIPSRHVPET*PYVVSYFWLRTHLS
Trigger: AGATAGGTGAGTCCTTAACCAAAAATAACTAACTACATAAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR GCA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATaGATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACT +
Preference number: 1 (lower is better)
Translates to: GIWNIGNHNITIGIQ*IIIANIPSRHVPET
Trigger: AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR CCA 90 bp AACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTaGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATA +
Preference number: 1 (lower is better)
Translates to: NKIPPYIFFLLAGHY*TSNIYPPEHWPLRI
Trigger: TATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR TCA 90 bp GAAGTCCTATTAGCTGGTCAATGTGCTTGGTTCTTCCTCAATGCATaGTACATAGACCTCAATTATTTCAATGGTCACTGCCAGCCTTTT +
Preference number: 1 (lower is better)
Translates to: EVLLAGQCAWFFLNA*YIDLNYFNGHCQPF
Trigger: AAAAGGCTGGCAGTGACCATTGAAATAATTGAGGTCTATGTATCATGCATTGAGGAAGAACCAAGCACATTGACCAGCTAATAGGACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR TCA 90 bp GTAGGCACTTGGAACTTGATAAAGAATTTTCCCTCTATGCTTCCCTaGTACATTCATACCCTGGTGTATCAGAAGGGTTCTTCAAATGTC +
Preference number: 1 (lower is better)
Translates to: VGTWNLIKNFPSMLP*YIHTLVYQKGSSNV
Trigger: GACATTTGAAGAACCCTTCTGATACACCAGGGTATGAATGTATCAGGGAAGCATAGAGGGAAAATTCTTTATCAAGTTCCAAGTGCCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 90 bp ACAGTACAATGTATAGGGATTGAATGGGAAACAGTAACTGCATATTaGGAGAACTTTTCAAGTATAGACCCCACAGCACTTTCAACCCTG +
Preference number: 1 (lower is better)
Translates to: TVQCIGIEWETVTAY*ENFSSIDPTALSTL
Trigger: CAGGGTTGAAAGTGCTGTGGGGTCTATACTTGAAAAGTTCTCCCAATATGCAGTTACTGTTTCCCATTCAATCCCTATACATTGTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 90 bp AAATACAACCCCCAGAGAAGAAATGCTATTGGTCAAATCGTTCTTTaGAGTGCTCCATTTCTGCATAGCTCAACATTCCAAGGAGAACAT +
Preference number: 1 (lower is better)
Translates to: KYNPQRRNAIGQIVL*SAPFLHSSTFQGEH
Trigger: ATGTTCTCCTTGGAATGTTGAGCTATGCAGAAATGGAGCACTCCAAAGAACGATTTGACCAATAGCATTTCTTCTCTGGGGGTTGTATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR TCA 90 bp CATTTTAAGCAATTTAGTTCTGGTTCCCTGGAGAGTTGCATGCTTTaGAATACAACCCCCAGAGAAGAAATGCTATTGGTCAAATCGTTC +
Preference number: 1 (lower is better)
Translates to: HFKQFSSGSLESCML*NTTPREEMLLVKSF
Trigger: GAACGATTTGACCAATAGCATTTCTTCTCTGGGGGTTGTATTTCAAAGCATGCAACTCTCCAGGGAACCAGAACTAAATTGCTTAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 90 bp AATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTaGTTTGCCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGC +
Preference number: 1 (lower is better)
Translates to: NTLRNFSYISVGAMK*FATNRENNSEGRNC
Trigger: GCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CCA 90 bp GCATTCAAGTGTACCTATCTGAGGACTAGTTGGGTCCTTCTCAAGTaGGGAAAACCAATTAGAATTAACAAAATATCATTATGGATGCCA +
Preference number: 1 (lower is better)
Translates to: AFKCTYLRTSWVLLK*GKPIRINKISLWMP
Trigger: TGGCATCCATAATGATATTTTGTTAATTCTAATTGGTTTTCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATAGGTACACTTGAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR TCA 90 bp TACACAAGCAGTTGTATTCACAGGATAAGTGCATTTGATCATCTCTaGTCTATATCAAGTGGCAAGCTGACCTCATCTGATACAATTAGA +
Preference number: 1 (lower is better)
Translates to: YTSSCIHRISAFDHL*SISSGKLTSSDTIR
Trigger: TCTAATTGTATCAGATGAGGTCAGCTTGCCACTTGATATAGATCAGAGATGATCAAATGCACTTATCCTGTGAATACAACTGCTTGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR TCA 90 bp AAGGAAAACAACAACAACATTTTAATAGCTGGTCCTCAATCATTCTaGCTACCAAAGCTCTCCATCATTCATGCAGAAACTCTATTTCCT +
Preference number: 1 (lower is better)
Translates to: KENNNNILIAGPQSF*LPKLSIIHAETLFP
Trigger: AGGAAATAGAGTTTCTGCATGAATGATGGAGAGCTTTGGTAGTCAGAATGATTGAGGACCAGCTATTAAAATGTTGTTGTTGTTTTCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 90 bp TTGGTTCTTCCTCAATGCATGATACATAGACCTCAATTATTTCAATaGTCACTGCCAGCCTTTTATCTTCAGTTTGAGGTTTTAAACAAT +
Preference number: 1 (lower is better)
Translates to: LVLPQCMIHRPQLFQ*SLPAFYLQFEVLNN
Trigger: ATTGTTTAAAACCTCAAACTGAAGATAAAAGGCTGGCAGTGACCATTGAAATAATTGAGGTCTATGTATCATGCATTGAGGAAGAACCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 90 bp ATCAATGGGAAGCATTTAAAATGCCAAAGACAAACTCATGTTTGCTaGAGAACAATTAACCTCATTAATTTGAAAGGCAGCTGTGGTATT +
Preference number: 1 (lower is better)
Translates to: INGKHLKCQRQTHVC*RTINLINLKGSCGI
Trigger: AATACCACAGCTGCCTTTCAAATTAATGAGGTTAATTGTTCTCCAGCAAACATGAGTTTGTCTTTGGCATTTTAAATGCTTCCCATTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CAA 90 bp GAATCCACGGATTTCTTCCACAGCTGCCGGGGTCTAGAGTTCGCTTaGGATTCTGTGCTCACGGCCACCTCCACCGTGTTAGGGTTGGAC +
Preference number: 2 (lower is better)
Translates to: ESTDFFHSCRGLEFA*DSVLTATSTVLGLD
Trigger: GTCCAACCCTAACACGGTGGAGGTGGCCGTGAGCACAGAATCCAAAGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATCCGTGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CAA 90 bp ACACATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTaGACCTCAAGGACGACCGAAGATAGCTGTCATTCACCGCCTGGG +
Preference number: 2 (lower is better)
Translates to: THHCGPDCPWNSTMP*TSRTTEDSCHSPPG
Trigger: CCCAGGCGGTGAATGACAGCTATCTTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR GCA 90 bp TGGGATCCTGGTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTCACCTATCTGGTGTCTaGCATGCTCAGCACACACCT +
Preference number: 2 (lower is better)
Translates to: WDPGRGPGSPRSRAGSHFHLSGV*HAQHTP
Trigger: AGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTG...AAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGACCCCTACCAGGATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR GCA 90 bp CCAGTCCTGCTGGTAGACCTGCTCCCCGGTGGCTGGGTTACCTGTCTCCTGAAGAGCCCCTCTTCATTATaGAAGGGGTTCCGGTTCATT +
Preference number: 2 (lower is better)
Translates to: PVLLVDLLPGGWVTCLLKSPSSL*KGFRFI
Trigger: AATGAACCGGAACCCCTTGCATAATGAAGAGGGGCT...CTTCAGGAGACAGGTAACCCAGCCACCGGGGAGCAGGTCTACCAGCAGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CCA 90 bp CCCAGTCCTGCTGGTAGACCTGCTCCCCGGTGGCTGGGTTACCTGTCTCCTGAAAATAGGTGGGCATGTTaGAAAGGCAGCTTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: PSPAGRPAPRWLGYLSPENRWAC*KGSFCS
Trigger: ACTGCAGAAGCTGCCTTTCCAACATGCCCACCTATT...TTCAGGAGACAGGTAACCCAGCCACCGGGGAGCAGGTCTACCAGCAGGACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CAA 90 bp GAGTGGAGGAAAGGGTTATCGGAGGTGTGGTCTGGCAAGAGAGACTaGCTCCTCTTGCTGTCCTCCAGACCTTGGGGGAAAAGGGAGCTT +
Preference number: 2 (lower is better)
Translates to: EWRKGLSEVWSGKRD*LLLLSSRPWGKREL
Trigger: AAGCTCCCTTTTCCCCCAAGGTCTGGAGGACAGCAAGAGGAGCAAGTCTCTCTTGCCAGACCACACCTCCGATAACCCTTTCCTCCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CAA 90 bp CGAGTGTTTGTAAGGGTCCGAGGGGCATCTCCCAATAACCAAGCGTaGGTCATCCCTGTGGGAGTGGAGGAAAGGGTTATCGGAGGTGTG +
Preference number: 2 (lower is better)
Translates to: RVFVRVRGASPNNQA*VIPVGVEERVIGGV
Trigger: CACACCTCCGATAACCCTTTCCTCCACTCCCACAGGGATGACCAACGCTTGGTTATTGGGAGATGCCCCTCGGACCCTTACAAACACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR GCA 90 bp GGCATTTGGCAGCCCCCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCCACCTATCTGGTGTCTaGCATGCTCAGCACACACCT +
Preference number: 2 (lower is better)
Translates to: GIWQPPGFRGHQRKTESLHLSGV*HAQHTP
Trigger: AGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTG...GAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGGGGGCTGCCAAATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp ATCCTGGTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTCAACTTCTTTAGGGGAGCCTaGAGTTCTTGGGGTGAGCCT +
Preference number: 2 (lower is better)
Translates to: ILVGVREVHVLGQGHIFNFFRGA*SSWGEP
Trigger: AGGCTCACCCCAAGAACTCCAGGCTCCCCTAAAGAA...GTTGAAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGACCCCTACCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CCA 90 bp TGGGATCCTGGTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTATATACACATCATTGTaGCCCCGACTGTCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: WDPGRGPGSPRSRAGSHFIYTSL*PRLSLE
Trigger: TTCCAGGGACAGTCGGGGCCACAATGATGTGTATAT...AAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGACCCCTACCAGGATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CCA 90 bp ATCCTGGTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTCAACTGGGAGACTGGATTCTaGGATAGTGAATCCTGGCGT +
Preference number: 2 (lower is better)
Translates to: ILVGVREVHVLGQGHIFNWETGF*DSESWR
Trigger: ACGCCAGGATTCACTATCCCAGAATCCAGTCTCCCA...GTTGAAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGACCCCTACCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CCA 90 bp CCGAAGATAGCTGTCATTCACCGCCTGGGATGGCAACGAGTGTTTGTAAGGGTCGTTCCCTGTGGCACGTaGCCCGATTTGACGTTTCTG +
Preference number: 2 (lower is better)
Translates to: PKIAVIHRLGWQRVFVRVVPCGT*PDLTFL
Trigger: CAGAAACGTCAAATCGGGCCACGTGCCACAGGGAAC...GACCCTTACAAACACTCGTTGCCATCCCAGGCGGTGAATGACAGCTATCTTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR TCA 90 bp CCTGAAGCATCTGGTCTTCATCGATGTCATAGAGGTTCCCCATCCGCAGGCAGGGGGAACCTCTTTGGATaGAGTCAGCAGCTCTTTTGG +
Preference number: 2 (lower is better)
Translates to: PEASGLHRCHRGSPSAGRGNLFG*SQQLFW
Trigger: CCAAAAGAGCTGCTGACTTCATCCAAAGAGGTTCCC...CCTGCCTGCGGATGGGGAACCTCTATGACATCGATGAAGACCAGATGCTTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CCA 90 bp TGGGATCCTGGTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTTATCCTTCTGCCGGTTaGCCACAAATGTTTGGAGTT +
Preference number: 2 (lower is better)
Translates to: WDPGRGPGSPRSRAGSHFYPSAG*PQMFGV
Trigger: AACTCCAAACATTTGTGGCCAACCGGCAGAAGGATA...AAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGACCCCTACCAGGATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR TCA 90 bp GGAAGTTTTCACTGGGATCCTGGTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAAAAGGACCTGTTGTCTaGGTACATCAAATTCCCCTT +
Preference number: 2 (lower is better)
Translates to: GSFHWDPGRGPGSPRSRAKGPVV*VHQIPL
Trigger: AAGGGGAATTTGATGTACTCAGACAACAGGTCCTTT...TGCCCGAGAACGTGGACTTCCCGGACCCCTACCAGGATCCCAGTGAAAACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR GCA 90 bp TGGGATCCTGGTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTACGAACACACTGATTTaGTATTCTTTAGGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: WDPGRGPGSPRSRAGSHFTNTLI*YSLGEP
Trigger: AGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGT...AAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGACCCCTACCAGGATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTAGGCTTCTCCATGGCTaGGTCTTGGGGCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPRLLHG*VLGQQR
Trigger: CCTCTGCTGCCCCAAGACCCAGCCATGGAGAAGCCT...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCGGCCCCGACTGTCCCTaGAACAGTACGATGCCGTTG +
Preference number: 2 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTGPDCP*NSTMPL
Trigger: CAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCC...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
3UTR-3UTR CCA 90 bp GTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTCAACAAACTGAGTCAGCAGCTCTTTTaGGTGAGTCCATTCTTGAGG +
Preference number: 2 (lower is better)
Translates to: VGVREVHVLGQGHIFNKLSQQLF*VSPFLR
Trigger: CCTCAAGAATGGACTCACCCAAAAGAGCTGCTGACT...CAGTTTGTTGAAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGACCCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR TCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGCCCCGAGAGTTTGCTTaGGGGGACACTAAACAGGCT +
Preference number: 2 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVPREFA*GDTKQA
Trigger: AGCCTGTTTAGTGTCCCCTCAAGCAAACTCTCGGGG...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR GCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAACACCTATCTGGTGTCTaGCATGCTCAGCACACACCT +
Preference number: 2 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQHLSGV*HAQHTP
Trigger: AGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTG...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR GCA 90 bp CCCAGTCCTGCTGGTAGACCTGCTCCCCGGTGGCTGGGTTACCTGTCTCCTGAAGCACTACAGTGCAGATaGATTCTTAACTGTTTTTAT +
Preference number: 2 (lower is better)
Translates to: PSPAGRPAPRWLGYLSPEALQCR*ILNCFY
Trigger: ATAAAAACAGTTAAGAATGCATCTGCACTGTAGTGC...TTCAGGAGACAGGTAACCCAGCCACCGGGGAGCAGGTCTACCAGCAGGACTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGTTCTTTAGGGGAGCCTaGAGTTCTTGGGGTGAGCCT +
Preference number: 2 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGEFFRGA*SSWGEP
Trigger: AGGCTCACCCCAAGAACTCCAGGCTCCCCTAAAGAA...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CCA 90 bp GGCATTTGGCAGCCCCCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCGTACTTTCCCAAAGATaGAGCTATTCCATGCATCCT +
Preference number: 2 (lower is better)
Translates to: GIWQPPGFRGHQRKTESLVLSQR*SYSMHP
Trigger: AGGATGCATGGAATAGCTCCATCTTTGGGAAAGTAC...GAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGGGGGCTGCCAAATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp GGACGACCGAAGATAGCTGTCATTCACCGCCTGGGATGGCAACGAGTGTTTGTAGTGAATCCTGGCGTATaGAATCCACGGATTTCTTCC +
Preference number: 2 (lower is better)
Translates to: GRPKIAVIHRLGWQRVFVVNPGV*NPRISS
Trigger: GGAAGAAATCCGTGGATTCCATACGCCAGGATTCAC...TACAAACACTCGTTGCCATCCCAGGCGGTGAATGACAGCTATCTTCGGTCGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CAA 90 bp CCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTaGAGTGGAAGATTATGGCATGAAGCCGTGTGCAAAAGAGCCAAC +
Preference number: 2 (lower is better)
Translates to: PIWCLPCSAHTSQDS*SGRLWHEAVCKRAN
Trigger: GTTGGCTCTTTTGCACACGGCTTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR CAA 90 bp TTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTaGCTGGGGTGGATTAAGGTCTGGAATGCACTGGAAGGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: FMSKHPRLMRKWRRS*LGWIKVWNALEGQK
Trigger: CTTCTGCCCTTCCAGTGCATTCCAGACCTTAATCCACCCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CAA 90 bp TGTGGTTCTTACTGTTGTCAGGTTCCCTGTGGCACGTGGCCCGATTaGACGTTTCTGAAATGTCAGAGTGGGCCATCTCTTCTGGAAGAT +
Preference number: 2 (lower is better)
Translates to: CGSYCCQVPCGTWPD*TFLKCQSGPSLLED
Trigger: ATCTTCCAGAAGAGATGGCCCACTCTGACATTTCAGAAACGTCAAATCGGGCCACGTGCCACAGGGAACCTGACAACAGTAAGAACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CAA 90 bp TTGGGGTATTTGGAGGCCACTGACCTTTTAAAGTTGTCCTTGGTTTaGTGGTTCTTACTGTTGTCAGGTTCCCTGTGGCACGTGGCCCGA +
Preference number: 2 (lower is better)
Translates to: LGYLEATDLLKLSLV*WFLLLSGSLWHVAR
Trigger: TCGGGCCACGTGCCACAGGGAACCTGACAACAGTAAGAACCACAAAACCAAGGACAACTTTAAAAGGTCAGTGGCCTCCAAATACCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR TCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGGATCAGATGTTGGGGTaGCTATTCTGGGCCCTTCGA +
Preference number: 2 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVDQMLG*LFWALR
Trigger: TCGAAGGGCCCAGAATAGTCACCCCAACATCTGATC...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR TCA 90 bp ATAAGGCATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTACAGTACGATGCCGTTaGCCTCAAGGACGACCGAAG +
Preference number: 2 (lower is better)
Translates to: IRHNMLRNIHIIVAPTVPTVRCR*PQGRPK
Trigger: CTTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGT...AGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
3UTR-3UTR TCA 90 bp TCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCGCCGTTCCCTGTCCTTaGGGCTTATGCTCCGGGAGG +
Preference number: 2 (lower is better)
Translates to: SILGIFLYTRLLLQEFKTAVPCP*GLCSGR
Trigger: CCTCCCGGAGCATAAGCCTCAAGGACAGGGAACGGC...GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR GCA 90 bp GGAAGATACCTAGGGCTCTTTAGGGAGTGGGTCCTATTCTCTGCTGTTGCCTCATGGCATGAAGCCGTGTaGAAAAGAGCCAACAACAAC +
Preference number: 2 (lower is better)
Translates to: GRYLGLFREWVLFSAVASWHEAV*KRANNN
Trigger: GTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCA...TGAGGCAACAGCAGAGAATAGGACCCACTCCCTAAAGAGCCCTAGGTATCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR GCA 90 bp TTGGAAAGGCAGCTTCTGCAGTGCGTGGAGTTCTGCCGGTATCGCTCGCTGGTCACCATTGGCATCCAATaGATCATTATTGCCAACATA +
Preference number: 2 (lower is better)
Translates to: LERQLLQCVEFCRYRSLVTIGIQ*IIIANI
Trigger: TATGTTGGCAATAATGATGCATTGGATGCCAATGGT...GACCAGCGAGCGATACCGGCAGAACTCCACGCACTGCAGAAGCTGCCTTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CCA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCAAAGGACTCACCTATCTaGTGTCTGCCATGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLAKDSPI*CLPCSA
Trigger: TGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTT...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGATTCTTTAGGGGAGCCTaGAGTTCTTGGGGTGAGCCT +
Preference number: 2 (lower is better)
Translates to: LASNASLLPTYPVGMSRRFFRGA*SSWGEP
Trigger: AGGCTCACCCCAAGAACTCCAGGCTCCCCTAAAGAA...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CCA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTGACGACAACCACCATGGCTGTTTaGAAACGGAACGAGTTATGG +
Preference number: 2 (lower is better)
Translates to: PGFRGHQRKTESLFGLTTTTMAV*KRNELW
Trigger: CCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGT...TGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp GGAAGATACCTAGGGCTCTTTAGGGAGTGGGTCCTATTCTCTGCTGTTGCCTCATGGGATAGTGAATCCTaGCGTATGGAATCCACGGAT +
Preference number: 2 (lower is better)
Translates to: GRYLGLFREWVLFSAVASWDSES*RMESTD
Trigger: ATCCGTGGATTCCATACGCCAGGATTCACTATCCCA...TGAGGCAACAGCAGAGAATAGGACCCACTCCCTAAAGAGCCCTAGGTATCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CCA 90 bp AGAAGCCGTTCCCTGTCCTTGAGGCTTATGCTCCGGGAGGGCCTGCTAAGGTCTACATTTTCAACAAACTaGGGTGGATCTAAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: RSRSLSLRLMLREGLLRSTFSTN*GGSKWK
Trigger: TTTCCACTTAGATCCACCCCAGTTTGTTGAAAATGT...AGACCTTAGCAGGCCCTCCCGGAGCATAAGCCTCAAGGACAGGGAACGGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR TCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGTGGCCCAAAACAGACTaGGGTCTTCTGCAAACACTG +
Preference number: 2 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVWPKTD*GLLQTL
Trigger: CAGTGTTTGCAGAAGACCTCAGTCTGTTTTGGGCCA...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp TATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGTGGCATGAAGCCGTGTaGAAAAGAGCCAACAACAAC +
Preference number: 2 (lower is better)
Translates to: YLVSAMLSTHLTRFLEWKWHEAV*KRANNN
Trigger: GTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCA...CTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR GCA 90 bp GAAGAGCGATACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGTGGCATGAAGCCGTGTaGAAAAGAGCCAACAACAAC +
Preference number: 2 (lower is better)
Translates to: EERYTANWTPPWLFGNGTWHEAV*KRANNN
Trigger: GTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCA...CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp CATAACATAGCAACTATCTTGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTGATCTGGTGTCTGCCATaGTCAGCACACACCTCACAA +
Preference number: 2 (lower is better)
Translates to: HNIATILSGALVFVAGTVIWCLP*SAHTSQ
Trigger: TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGAT...CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp TTCTCGGGCAGGGTCACATTTTCAACAAACTGGGGTGGATCTAAGTGGAAACCATGGTTTTCAGGTAGGTaGGCTCGACCTCACTACAGT +
Preference number: 2 (lower is better)
Translates to: FSGRVTFSTNWGGSKWKPWFSGR*ARPHYS
Trigger: ACTGTAGTGAGGTCGAGCGCACCTACCTGAAAACCA...TGGTTTCCACTTAGATCCACCCCAGTTTGTTGAAAATGTGACCCTGCCCGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CCA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGAAGGACTCACCTATCTaGTGTCTGCCATGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMKDSPI*CLPCSA
Trigger: TGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTT...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CCA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACAGGTCCCTCGGGCCTTTaGCTCCAGATGTGTCTTGGA +
Preference number: 2 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTGPSGL*LQMCLG
Trigger: TCCAAGACACATCTGGAGCCAAAGGCCCGAGGGACC...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACAAATTGGACACCACCATaGCTGTTTGGAAACGGAACG +
Preference number: 2 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTNWTPP*LFGNGT
Trigger: CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATT...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTAGACTCATGAGGAAATaGAGGCGATCCTTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSRLMRK*RRSLLG
Trigger: CCCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCT...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp ATGGAATCCACGGATTTCTTCCACAGCTGCCGGGGTCTAGAGTTCGCTTTGGATATGAGGGAACCTCTTTaGATGAAGTCAGCAGCTCTT +
Preference number: 2 (lower is better)
Translates to: MESTDFFHSCRGLEFALDMREPL*MKSAAL
Trigger: AAGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCAT...ATCCAAAGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATCCGTGGATTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CAA 90 bp GAGTCCATTCTTGAGGAGTTCATGTTGGACATGCTGGAAATGTTTTaGGCTGACCGGAGGAGTTTTAACATGTTGCTCTGGGATCCCGTC +
Preference number: 2 (lower is better)
Translates to: ESILEEFMLDMLEMF*ADRRSFNMLLWDPV
Trigger: GACGGGATCCCAGAGCAACATGTTAAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCATGTCCAACATGAACTCCTCAAGAATGGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR TCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGTGGAAGATTATGGCATaGAGCCGTGTGCAAAAGAGC +
Preference number: 2 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVWKIMA*SRVQKS
Trigger: GCTCTTTTGCACACGGCTTCATGCCATAATCTTCCA...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR TCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGATGGAAGATTATGGCATaGAGCCGTGTGCAAAAGAGC +
Preference number: 2 (lower is better)
Translates to: LASNASLLPTYPVGMSRRWKIMA*SRVQKS
Trigger: GCTCTTTTGCACACGGCTTCATGCCATAATCTTCCA...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR TCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTCATCGAAGCCGAGGGTaGGAGAAACACACATCAACA +
Preference number: 2 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPHRSRG*EKHTST
Trigger: TGTTGATGTGTGTTTCTCTCACCCTCGGCTTCGATG...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR TCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGGATACTATACAACCCTaGGTCATCACCAGAAGGGAG +
Preference number: 2 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVDTIQP*VITRRE
Trigger: CTCCCTTCTGGTGATGACTCAGGGTTGTATAGTATC...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR TCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTAGGGATCCCGTCAGATTaGAGTCTGGAGACTTCTTCT +
Preference number: 2 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVGIPSD*SLETSS
Trigger: AGAAGAAGTCTCCAGACTTCAATCTGACGGGATCCC...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR GCA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGCACCTATCTGGTGTCTaGCATGCTCAGCACACACCT +
Preference number: 2 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQHLSGV*HAQHTP
Trigger: AGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTG...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp GGAAGATACCTAGGGCTCTTTAGGGAGTGGGTCCTATTCTCTGCTGTTGCCTCACATGTCCCGGAGACTTaGCCTTATGTAGTTAGTTAT +
Preference number: 2 (lower is better)
Translates to: GRYLGLFREWVLFSAVASHVPET*PYVVSY
Trigger: ATAACTAACTACATAAGGGCAAGTCTCCGGGACATG...TGAGGCAACAGCAGAGAATAGGACCCACTCCCTAAAGAGCCCTAGGTATCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR GCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTAATGGAGGCGATCCTTaGTGGGGTGGATTAAGGTCT +
Preference number: 2 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPNGGDP*WGGLRS
Trigger: AGACCTTAATCCACCCCAGCAAGGATCGCCTCCATT...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTAAGGACTCACCTATCTaGTGTCTGCCATGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPKDSPI*CLPCSA
Trigger: TGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTT...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CCA 90 bp TGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTTCTTTAGGGGAGCCTaGAGTTCTTGGGGTGAGCCT +
Preference number: 2 (lower is better)
Translates to: CTSYRSQYTYGCWCMSPHFFRGA*SSWGEP
Trigger: AGGCTCACCCCAAGAACTCCAGGCTCCCCTAAAGAA...ATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCGTTGGTCATCCCTGTaGGAGTGGAGGAAAGGGTTA +
Preference number: 2 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLRWSSL*EWRKGL
Trigger: TAACCCTTTCCTCCACTCCCACAGGGATGACCAACG...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CAA 90 bp ATGTCCATGATGAGGGAACCTCTTTGGATGAAGTCAGCAGCTCTTTaGGGTGAGTCCATTCTTGAGGAGTTCATGTTGGACATGCTGGAA +
Preference number: 2 (lower is better)
Translates to: MSMMREPLWMKSAAL*GESILEEFMLDMLE
Trigger: TTCCAGCATGTCCAACATGAACTCCTCAAGAATGGACTCACCCAAAAGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCATCATGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR TCA 90 bp GATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCATGGAAGATTATGGCATaGAGCCGTGTGCAAAAGAGC +
Preference number: 2 (lower is better)
Translates to: DVKEDKPKTMLAFGRQMAWKIMA*SRVQKS
Trigger: GCTCTTTTGCACACGGCTTCATGCCATAATCTTCCA...TGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR TCA 90 bp ATACGGCTGTTGGTGCATGTCACCACATTAACAACTCTGGGAAGAGCGATACACCCTCACAAGATTCCTTaGGTGGAAGATTATGGCATG +
Preference number: 2 (lower is better)
Translates to: IRLLVHVTTLTTLGRAIHPHKIP*VEDYGM
Trigger: CATGCCATAATCTTCCACTCAAGGAATCTTGTGAGG...GTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACATGCACCAACAGCCGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR TCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTCACAAGATTCCTTaGGTGGAAGATTATGGCATG +
Preference number: 2 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIPHKIP*VEDYGM
Trigger: CATGCCATAATCTTCCACTCAAGGAATCTTGTGAGG...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR TCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGCCTCACAAGATTCCTTaGGTGGAAGATTATGGCATG +
Preference number: 2 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVPHKIP*VEDYGM
Trigger: CATGCCATAATCTTCCACTCAAGGAATCTTGTGAGG...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR TCA 90 bp GATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCAGATACTATACAACCCTaGGTCATCACCAGAAGGGAG +
Preference number: 2 (lower is better)
Translates to: DVKEDKPKTMLAFGRQMADTIQP*VITRRE
Trigger: CTCCCTTCTGGTGATGACTCAGGGTTGTATAGTATC...TGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCATCTGGTGTCTGCCATaGTCAGCACACACCTCACAA +
Preference number: 2 (lower is better)
Translates to: LGDINVLVYAALNKTIEAIWCLP*SAHTSQ
Trigger: TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGAT...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGATCTGGTGTCTGCCATaGTCAGCACACACCTCACAA +
Preference number: 2 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQIWCLP*SAHTSQ
Trigger: TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGAT...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAATACCCTCCAGAACATTaGCCATTACGTATATTTCCC +
Preference number: 2 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQYPPEH*PLRIFP
Trigger: GGGAAATATACGTAATGGCCAATGTTCTGGAGGGTA...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGTACCCTCCAGAACATTaGCCATTACGTATATTTCCC +
Preference number: 2 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGEYPPEH*PLRIFP
Trigger: GGGAAATATACGTAATGGCCAATGTTCTGGAGGGTA...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CCA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCAAGGACTCACCTATCTaGTGTCTGCCATGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: EAVCKRANNNNNKIPPYIKDSPI*CLPCSA
Trigger: TGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTT...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CCA 90 bp TTGCATGTGCGTGCTATTACCCATGGACAGAGACCCAACCGTTTGCATTCAAGTCGATACACAGCTAATTaGACACCACCATGGCTGTTT +
Preference number: 2 (lower is better)
Translates to: LHVRAITHGQRPNRLHSSRYTAN*TPPWLF
Trigger: AAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCG...ACTTGAATGCAAACGGTTGGGTCTCTGTCCATGGGTAATAGCACGCACATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR-3UTR CCA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGGGCCCCGACTGTCCCTaGAACAGTACGATGCCGTTG +
Preference number: 2 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWGPDCP*NSTMPL
Trigger: CAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCC...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000535259.6
3UTR CAA 90 bp CAGATGGCATTGTACTTCTTACAGATCACAGTACACATACGGCTGTaGGTGCATGTCACCACATTAACAACTCTGGGAAGAGCGATACAC +
Preference number: 2 (lower is better)
Translates to: QMALYFLQITVHIRL*VHVTTLTTLGRAIH
Trigger: GTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACAATGCCATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CAA 90 bp GACATGCTGGAAATGTTTTTGGCTGACCGGAGGAGTTTTAACATGTaGCTCTGGGATCCCGTCAGATTGAAGTCTGGAGACTTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: DMLEMFLADRRSFNM*LWDPVRLKSGDFFF
Trigger: AAAGAAGAAGTCTCCAGACTTCAATCTGACGGGATCCCAGAGCAACATGTTAAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR TCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTCCTCACAAGATTCCTTaGGTGGAAGATTATGGCATG +
Preference number: 2 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPPHKIP*VEDYGM
Trigger: CATGCCATAATCTTCCACTCAAGGAATCTTGTGAGG...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR TCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTACCTCACAAGATTCCTTaGGTGGAAGATTATGGCATG +
Preference number: 2 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVPHKIP*VEDYGM
Trigger: CATGCCATAATCTTCCACTCAAGGAATCTTGTGAGG...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR GCA 90 bp CGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGATGGCATGAAGCCGTGTaGAAAAGAGCCAACAACAAC +
Preference number: 2 (lower is better)
Translates to: RRHKCVSLCSSEQDHRSRWHEAV*KRANNN
Trigger: GTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCA...TCGGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACATGTCCCGGAGACTTaGCCTTATGTAGTTAGTTAT +
Preference number: 2 (lower is better)
Translates to: LASNASLLPTYPVGMSRRHVPET*PYVVSY
Trigger: ATAACTAACTACATAAGGGCAAGTCTCCGGGACATG...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR GCA 90 bp CATAACATAGCAACTATCTTGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTGCATGTCCCGGAGACTTaGCCTTATGTAGTTAGTTAT +
Preference number: 2 (lower is better)
Translates to: HNIATILSGALVFVAGTVHVPET*PYVVSY
Trigger: ATAACTAACTACATAAGGGCAAGTCTCCGGGACATG...CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTCCAGAAGGGAGGAAATaGAAACTTACGTACATAGGC +
Preference number: 2 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSPEGRK*KLTYIG
Trigger: GCCTATGTACGTAAGTTTGCATTTCCTCCCTTCTGG...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGCTAGTCAGCCCCTTCTaGCTTTCAAAAATGAAAGGA +
Preference number: 2 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGLVSPF*LSKMKG
Trigger: TCCTTTCATTTTTGAAAGGCAGAAGGGGCTGACTAG...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCAACACGCGTCTATTGCTaGAGGAATTTAAAACCCTGG +
Preference number: 2 (lower is better)
Translates to: EPNFLISCTCQSHYSADATRVYC*RNLKPW
Trigger: CCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGT...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535259.6
ENST00000675398.1
3UTR-3UTR GCA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGTGTACACGCGTCTATTaGTGCAGGAATTTAAAACCC +
Preference number: 2 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMCTRVY*CRNLKP
Trigger: GGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACA...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
3UTR-3UTR GCA 90 bp TTCTCGGGCAGGGTCACATTTTCAACAAACTGGGGTGGATCTAAGTGGAAACCATGTACACGCGTCTATTaGTGCAGGAATTTAAAACCC +
Preference number: 2 (lower is better)
Translates to: FSGRVTFSTNWGGSKWKPCTRVY*CRNLKP
Trigger: GGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACA...TGGTTTCCACTTAGATCCACCCCAGTTTGTTGAAAATGTGACCCTGCCCGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CCA 90 bp AAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCATTGTACTTCTTACAGGAGTTATGGTTACTCTaGGAGGGAAGGGGTAACAGA +
Preference number: 2 (lower is better)
Translates to: KPKTMLAFGRQMALYFLQELWLL*EGRGNR
Trigger: TCTGTTACCCCTTCCCTCCCAGAGTAACCATAACTC...CTGTAAGAAGTACAATGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCACGATACACAGCTAATTaGACACCACCATGGCTGTTT +
Preference number: 2 (lower is better)
Translates to: EPNFLISCTCQSHYSADARYTAN*TPPWLF
Trigger: AAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCG...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp CATAACATAGCAACTATCTTGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTGTTCCTACATCTCTGTTaGTGCTATGAAGTGGTTTGC +
Preference number: 2 (lower is better)
Translates to: HNIATILSGALVFVAGTVFLHLC*CYEVVC
Trigger: GCAAACCACTTCATAGCACCAACAGAGATGTAGGAA...CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCTCCATGGCTGGGTCTTaGGGCAGCAGAGGTACAGCA +
Preference number: 2 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFSMAGS*GSRGTA
Trigger: TGCTGTACCTCTGCTGCCCCAAGACCCAGCCATGGA...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGATCCAGGCTTCTCCATaGCTGGGTCTTGGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWIQASP*LGLGAA
Trigger: TGCTGCCCCAAGACCCAGCCATGGAGAAGCCTGGAT...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACATATACACATCATTGTaGCCCCGACTGTCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: SYISVGAMKWFATNRENNIYTSL*PRLSLE
Trigger: TTCCAGGGACAGTCGGGGCCACAATGATGTGTATAT...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535259.6
3UTR-3UTR CCA 90 bp TCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCCTCACTACAGTCCTTaGGGTATTTGGAGGCCACTG +
Preference number: 2 (lower is better)
Translates to: SILGIFLYTRLLLQEFKTPHYSP*GIWRPL
Trigger: CAGTGGCCTCCAAATACCCCAAGGACTGTAGTGAGG...GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CAA 90 bp GAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCATaGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCAT +
Preference number: 2 (lower is better)
Translates to: EDKPKTMLAFGRQMA*YFLQITVHIRLLVH
Trigger: ATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACAATGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CAA 90 bp CTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGTATCCACAGTTaGGAGGATACTCAGGGTAGATCCAAGAGTGCCTCGTGTTTTGAA +
Preference number: 2 (lower is better)
Translates to: LRREKLLVSLNCIHS*EDTQGRSKSASCFE
Trigger: TTCAAAACACGAGGCACTCTTGGATCTACCCTGAGTATCCTCCAAACTGTGGATACAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CAA 90 bp TCTCTAGGGAACCTGATGCTTTCTGTCAGCCACAGCAGTAGGCACTaGGAACTTGATAAAGAATTTTCCCTCTATGCTTCCCTGATACAT +
Preference number: 2 (lower is better)
Translates to: SLGNLMLSVSHSSRH*ELDKEFSLYASLIH
Trigger: ATGTATCAGGGAAGCATAGAGGGAAAATTCTTTATCAAGTTCCAAGTGCCTACTGCTGTGGCTGACAGAAAGCATCAGGTTCCCTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR-3UTR TCA 90 bp ACAGATGGCATTGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCACCTCACAAGATTCCTTaGGTGGAAGATTATGGCATG +
Preference number: 2 (lower is better)
Translates to: TDGIVLLTDHSTHTAVGAPHKIP*VEDYGM
Trigger: CATGCCATAATCTTCCACTCAAGGAATCTTGTGAGG...TGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACAATGCCATCTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR TCA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAAGATCAGATGTTGGGGTaGCTATTCTGGGCCCTTCGA +
Preference number: 2 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAEDQMLG*LFWALR
Trigger: TCGAAGGGCCCAGAATAGTCACCCCAACATCTGATC...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACAACCATTGGCATCCAATaGATCATTATTGCCAACATA +
Preference number: 2 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTTIGIQ*IIIANI
Trigger: TATGTTGGCAATAATGATGCATTGGATGCCAATGGT...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGTCAATCGCACTACAGTaGAGATGCATTCTTAACTGT +
Preference number: 2 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGSIALQ*RCILNC
Trigger: ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGA...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp AGTAGAGTTTATACTGGTCGTTGTTGGAAAGCCCCTCTTCATTATGCAAGGGGTGGAGTTTTAACATGTTaGTCTGGGATCCCGTCAGAT +
Preference number: 2 (lower is better)
Translates to: SRVYTGRCWKAPLHYARGGVLTC*SGIPSD
Trigger: ATCTGACGGGATCCCAGAGCAACATGTTAAAACTCC...ACCCCTTGCATAATGAAGAGGGGCTTTCCAACAACGACCAGTATAAACTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATACCCTCCAGAACATTaGCCATTACGTATATTTCCC +
Preference number: 2 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVYPPEH*PLRIFP
Trigger: GGGAAATATACGTAATGGCCAATGTTCTGGAGGGTA...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTACCCTCCAGAACATTaGCCATTACGTATATTTCCC +
Preference number: 2 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTYPPEH*PLRIFP
Trigger: GGGAAATATACGTAATGGCCAATGTTCTGGAGGGTA...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATTAGCAGGGCACTATTaGACATCCAACATTTACCCT +
Preference number: 2 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVLAGHY*TSNIYP
Trigger: AGGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAA...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACAGAGAAAATTACATGGTaGGCTGACCTTAATGGAATT +
Preference number: 2 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTEKITW*ADLNGI
Trigger: AATTCCATTAAGGTCAGCCCACCATGTAATTTTCTC...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGGAGTTATGGTTACTCTaGGAGGGAAGGGGTAACAGA +
Preference number: 2 (lower is better)
Translates to: PPTERITQKGEIACLTKLELWLL*EGRGNR
Trigger: TCTGTTACCCCTTCCCTCCCAGAGTAACCATAACTC...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATACCACCATGGCTGTTTaGAAACGGAACGAGTTATGG +
Preference number: 2 (lower is better)
Translates to: FSYISVGAMKWFATNRENTTMAV*KRNELW
Trigger: CCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGT...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp ACAGATGGCATTGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCACCTTCGGCAGACAGATaGCATTGTACTTCTTACAGA +
Preference number: 2 (lower is better)
Translates to: TDGIVLLTDHSTHTAVGAPSADR*HCTSYR
Trigger: TCTGTAAGAAGTACAATGCCATCTGTCTGCCGAAGG...TGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACAATGCCATCTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp ACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTGGATTAAGGTCTaGAATGCACTGGAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: TVDSSKGHVFSFFIQRCMGWIKV*NALEGQ
Trigger: CTGCCCTTCCAGTGCATTCCAGACCTTAATCCACCC...CATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp ACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGAGACTCATGAGGAAATaGAGGCGATCCTTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: TVDSSKGHVFSFFIQRCMRLMRK*RRSLLG
Trigger: CCCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCT...CATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTTTTAACATGTTGCTCTaGGATCCCGTCAGATTGAAG +
Preference number: 2 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPFNMLL*DPVRLK
Trigger: CTTCAATCTGACGGGATCCCAGAGCAACATGTTAAA...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CCA 90 bp CGTTCATGTTGTCTCCAAAAATGCTCTCTTTCCCCTGAAAGGACCTGTTGTCTGTCATGTTGGACATGCTaGAAATGTTTTTGGCTGACC +
Preference number: 2 (lower is better)
Translates to: RSCCLQKCSLSPERTCCLSCWTC*KCFWLT
Trigger: GGTCAGCCAAAAACATTTCCAGCATGTCCAACATGA...CAGACAACAGGTCCTTTCAGGGGAAAGAGAGCATTTTTGGAGACAACATGAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAATTGAGGAGTTCATGTTaGACATGCTGGAAATGTTTT +
Preference number: 2 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQLRSSC*TCWKCF
Trigger: AAAACATTTCCAGCATGTCCAACATGAACTCCTCAA...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTAGCTTCTGCAGTGCGTaGAGTTCTGCCGGTATCGCT +
Preference number: 2 (lower is better)
Translates to: MNYNEGSTVITNTLICYSSFCSA*SSAGIA
Trigger: AGCGATACCGGCAGAACTCCACGCACTGCAGAAGCT...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CAA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATaGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTAT +
Preference number: 2 (lower is better)
Translates to: QQNTSLHLLPLSRAL*DIQHLPSRTLAITY
Trigger: ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR CAA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTaGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATT +
Preference number: 2 (lower is better)
Translates to: PGFRGHQRKTESLFG*TTNHSSVFWEDFLI
Trigger: AATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CAA 90 bp GTTTATGCTCTAGAAGACTCTCTTACCCAGAGTATTTTAAATTGGTaGCATGTGCGTGCTATTACCCATGGACAGAGACCCAACCGTTTG +
Preference number: 2 (lower is better)
Translates to: VYALEDSLTQSILNW*HVRAITHGQRPNRL
Trigger: CAAACGGTTGGGTCTCTGTCCATGGGTAATAGCACGCACATGCAACCAATTTAAAATACTCTGGGTAAGAGAGTCTTCTAGAGCATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CAA 90 bp TACAGTTTATGCTCTAGAAGACTCTCTTACCCAGAGTATTTTAAATaGGTTGCATGTGCGTGCTATTACCCATGGACAGAGACCCAACCG +
Preference number: 2 (lower is better)
Translates to: YSLCSRRLSYPEYFK*VACACYYPWTETQP
Trigger: CGGTTGGGTCTCTGTCCATGGGTAATAGCACGCACATGCAACCAATTTAAAATACTCTGGGTAAGAGAGTCTTCTAGAGCATAAACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CAA 90 bp TACATAGTTATTGAGGTTATCCTTCTGCCGGTTGGCCACAAATGTTaGGAGTTCGTTCATGTTGTCTCCAAAAATGCTCTCTTTCCCCTG +
Preference number: 2 (lower is better)
Translates to: YIVIEVILLPVGHKC*EFVHVVSKNALFPL
Trigger: CAGGGGAAAGAGAGCATTTTTGGAGACAACATGAACGAACTCCAAACATTTGTGGCCAACCGGCAGAAGGATAACCTCAATAACTATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR TCA 90 bp TCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCTGGAAGATTATGGCATaGAGCCGTGTGCAAAAGAGC +
Preference number: 2 (lower is better)
Translates to: SILGIFLYTRLLLQEFKTWKIMA*SRVQKS
Trigger: GCTCTTTTGCACACGGCTTCATGCCATAATCTTCCA...GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
3UTR-3UTR TCA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAGTTTGGGGTGGAAGTaGGTGTCCAACAGAATTTCT +
Preference number: 2 (lower is better)
Translates to: FSYISVGAMKWFATNRENSLGWK*VSNRIS
Trigger: AGAAATTCTGTTGGACACTCACTTCCACCCCAAACT...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR TCA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCCTCTGTCTCCCTATaGTTGACCCTGAAATTTATT +
Preference number: 2 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLPSVSL*LTLKFI
Trigger: AATAAATTTCAGGGTCAATCATAGGGAGACAGAGGG...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACCATGTCCCGGAGACTTaGCCTTATGTAGTTAGTTAT +
Preference number: 2 (lower is better)
Translates to: SYISVGAMKWFATNRENNHVPET*PYVVSY
Trigger: ATAACTAACTACATAAGGGCAAGTCTCCGGGACATG...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTACCATTGGCATCCAATaGATCATTATTGCCAACATA +
Preference number: 2 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKITIGIQ*IIIANI
Trigger: TATGTTGGCAATAATGATGCATTGGATGCCAATGGT...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR GCA 90 bp GAAGAGCGATACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGGCACTACAGTGCAGATaGATTCTTAACTGTTTTTAT +
Preference number: 2 (lower is better)
Translates to: EERYTANWTPPWLFGNGTALQCR*ILNCFY
Trigger: ATAAAAACAGTTAAGAATGCATCTGCACTGTAGTGC...CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp TACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGTTATGGTTCAATCGCACTACAGTaGAGATGCATTCTTAACTGT +
Preference number: 2 (lower is better)
Translates to: YTANWTPPWLFGNGTSYGSIALQ*RCILNC
Trigger: ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGA...ACCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp TACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGTTATGGTAACTTCCTAATCTCTTaGACATGTCAATCGCACTAC +
Preference number: 2 (lower is better)
Translates to: YTANWTPPWLFGNGTSYGNFLIS*TCQSHY
Trigger: GTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTT...ACCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTAACTTCCTAATCTCTTaGACATGTCAATCGCACTAC +
Preference number: 2 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPNFLIS*TCQSHY
Trigger: GTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTT...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTAGCAGGGCACTATTaGACATCCAACATTTACCCT +
Preference number: 2 (lower is better)
Translates to: EAVCKRANNNNNKIPPYILAGHY*TSNIYP
Trigger: AGGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAA...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CCA 90 bp TTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATATTAGCAGGGCACTATTaGACATCCAACATTTACCCT +
Preference number: 2 (lower is better)
Translates to: LYTRLLLQEFKTLGVEYILAGHY*TSNIYP
Trigger: AGGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAA...TATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
3UTR-3UTR CCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGGAGAAAATTACATGGTaGGCTGACCTTAATGGAATT +
Preference number: 2 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVEKITW*ADLNGI
Trigger: AATTCCATTAAGGTCAGCCCACCATGTAATTTTCTC...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CCA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTGATGAGAAAATTACATaGTGGGCTGACCTTAATGGA +
Preference number: 2 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSDEKIT*WADLNG
Trigger: TCCATTAAGGTCAGCCCACCATGTAATTTTCTCATC...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CCA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATGATGAGAAAATTACATaGTGGGCTGACCTTAATGGA +
Preference number: 2 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHDEKIT*WADLNG
Trigger: TCCATTAAGGTCAGCCCACCATGTAATTTTCTCATC...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR TCA 90 bp TACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGTTATGGTGATGTGTCTTGGAAATaGACTATAATGAAGGTAGCA +
Preference number: 2 (lower is better)
Translates to: YTANWTPPWLFGNGTSYGDVSWK*TIMKVA
Trigger: TGCTACCTTCATTATAGTTCATTTCCAAGACACATC...ACCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp TTTCACAACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCACCTATCTGGTGTCTaGCATGCTCAGCACACACCT +
Preference number: 2 (lower is better)
Translates to: FHNITVDSSKGHVFSFFIHLSGV*HAQHTP
Trigger: AGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTG...GATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACACATGTCCCGGAGACTTaGCCTTATGTAGTTAGTTAT +
Preference number: 2 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTHVPET*PYVVSY
Trigger: ATAACTAACTACATAAGGGCAAGTCTCCGGGACATG...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACACCATTGGCATCCAATaGATCATTATTGCCAACATA +
Preference number: 2 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHTIGIQ*IIIANI
Trigger: TATGTTGGCAATAATGATGCATTGGATGCCAATGGT...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACAACGAACACACTGATTTaGTATTCTTTAGGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTTNTLI*YSLGEP
Trigger: AGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGT...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp ACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCACGAACACACTGATTTaGTATTCTTTAGGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: TEFLDVKEDKPKTMLAFGTNTLI*YSLGEP
Trigger: AGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGT...GCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGAAATGTGTTAGTTTATaGAGCTCTGAACAAGACCAT +
Preference number: 2 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGKCVSL*SSEQDH
Trigger: ATGGTCTTGTTCAGAGCTGCATAAACTAACACATTT...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp TCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCACACGCGTCTATTGCTaGAGGAATTTAAAACCCTGG +
Preference number: 2 (lower is better)
Translates to: SILGIFLYTRLLLQEFKTTRVYC*RNLKPW
Trigger: CCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGT...GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
3UTR-3UTR CCA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTTTGAGTGGAAGATTATaGCATGAAGCCGTGTGCAAA +
Preference number: 2 (lower is better)
Translates to: PNLLHMSIALQCRCILNCLSGRL*HEAVCK
Trigger: TTTGCACACGGCTTCATGCCATAATCTTCCACTCAA...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CCA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACATTGAGTGGAAGATTATaGCATGAAGCCGTGTGCAAA +
Preference number: 2 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTLSGRL*HEAVCK
Trigger: TTTGCACACGGCTTCATGCCATAATCTTCCACTCAA...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCAACTCTCACTCTCCCTaGAGGTCTCTGTGGCATTTG +
Preference number: 2 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFNSHSP*RSLWHL
Trigger: CAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTT...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CAA 90 bp CCCTTTGATGTGTTTAAGGAAATCACACACAAGTCCATATCGGCATaGTCTTCAGAAGCAAATGCGAGCAGAATATATTCTATACCCCTC +
Preference number: 2 (lower is better)
Translates to: PFDVFKEITHKSISA*SSEANASRIYSIPL
Trigger: GAGGGGTATAGAATATATTCTGCTCGCATTTGCTTCTGAAGACAATGCCGATATGGACTTGTGTGTGATTTCCTTAAACACATCAAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR-3UTR TCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATTGGAAGATTATGGCATaGAGCCGTGTGCAAAAGAGC +
Preference number: 2 (lower is better)
Translates to: TLLLILPKATFSVSLSRDWKIMA*SRVQKS
Trigger: GCTCTTTTGCACACGGCTTCATGCCATAATCTTCCA...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATTGGCATGAAGCCGTGTaGAAAAGAGCCAACAACAAC +
Preference number: 2 (lower is better)
Translates to: TLLLILPKATFSVSLSRDWHEAV*KRANNN
Trigger: GTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCA...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp CGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGAACCATTGGCATCCAATaGATCATTATTGCCAACATA +
Preference number: 2 (lower is better)
Translates to: RRHKCVSLCSSEQDHRSRTIGIQ*IIIANI
Trigger: TATGTTGGCAATAATGATGCATTGGATGCCAATGGT...TCGGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp TTGCCCACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGACGAACACACTGATTTaGTATTCTTTAGGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: LPTCKKIILTKQNAHHEETNTLI*YSLGEP
Trigger: AGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGT...CTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGTGGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACTTGAGTGGAAGATTATaGCATGAAGCCGTGTGCAAA +
Preference number: 2 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYLSGRL*HEAVCK
Trigger: TTTGCACACGGCTTCATGCCATAATCTTCCACTCAA...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTAATTGGACACCACCATaGCTGTTTGGAAACGGAACG +
Preference number: 2 (lower is better)
Translates to: MNYNEGSTVITNTLICYSNWTPP*LFGNGT
Trigger: CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATT...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp TTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTAAATTGGACACCACCATaGCTGTTTGGAAACGGAACG +
Preference number: 2 (lower is better)
Translates to: LLLILPKATFSVSLSRDVNWTPP*LFGNGT
Trigger: CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATT...TACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTTGGTGCTATGAAGTaGTTTGCCACCAACAGAGAG +
Preference number: 2 (lower is better)
Translates to: TLLLILPKATFSVSLSRDVGAMK*FATNRE
Trigger: CTCTCTGTTGGTGGCAAACCACTTCATAGCACCAAC...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTAAGGCTACACAGTCATaGAGATTCAGATTTAGGATC +
Preference number: 2 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLKATQS*RFRFRI
Trigger: GATCCTAAATCTGAATCTCCATGACTGTGTAGCCTT...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp ACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGACAGAAAGCCTCTTTaGCTTGACGACAAATCACTC +
Preference number: 2 (lower is better)
Translates to: TVDSSKGHVFSFFIQRCMDRKPL*LDDKSL
Trigger: GAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCTGTC...CATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCATGCTGGAAATGTTTTTaGCTGACCGGAGGAGTTTTA +
Preference number: 2 (lower is better)
Translates to: RANNNNNKIPPYIFFLLACWKCF*LTGGVL
Trigger: TAAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCA...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CAA 90 bp ATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTaGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGT +
Preference number: 2 (lower is better)
Translates to: ITRKLKLLRAKLPNL*HMSIALQCRCILNC
Trigger: ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR CAA 90 bp ATGACCGGGCACTTCTGTTGCCTCAGGAGTTATATACATATCAGTTaGCACACGAATTTCAATCCCCATTCCTTAAAACAGTTGATAACA +
Preference number: 2 (lower is better)
Translates to: MTGHFCCLRSYIHIS*HTNFNPHSLKQLIT
Trigger: TGTTATCAACTGTTTTAAGGAATGGGGATTGAAATTCGTGTGCAAACTGATATGTATATAACTCCTGAGGCAACAGAAGTGCCCGGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR-3UTR TCA 90 bp AATTTTTCAACCTGCCACTTTATCCCTTTCTTCAAGAATGTAAAGCAGAATGCAGATACTATACAACCCTaGGTCATCACCAGAAGGGAG +
Preference number: 2 (lower is better)
Translates to: NFSTCHFIPFFKNVKQNADTIQP*VITRRE
Trigger: CTCCCTTCTGGTGATGACTCAGGGTTGTATAGTATC...TGCATTCTGCTTTACATTCTTGAAGAAAGGGATAAAGTGGCAGGTTGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR TCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCAAAGCCTCTTTGGCTTaGCGACAAATCACTCTTCTG +
Preference number: 2 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFKASLA*RQITLL
Trigger: CAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTT...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGCACTACAGTGCAGATaGATTCTTAACTGTTTTTAT +
Preference number: 2 (lower is better)
Translates to: LGDINVLVYAALNKTIEAALQCR*ILNCFY
Trigger: ATAAAAACAGTTAAGAATGCATCTGCACTGTAGTGC...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATCCAGAAGGGAGGAAATaGAAACTTACGTACATAGGC +
Preference number: 2 (lower is better)
Translates to: TLLLILPKATFSVSLSRDPEGRK*KLTYIG
Trigger: GCCTATGTACGTAAGTTTGCATTTCCTCCCTTCTGG...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAATTAGCAGGGCACTATTaGACATCCAACATTTACCCT +
Preference number: 2 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAELAGHY*TSNIYP
Trigger: AGGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAA...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATGAGAAAATTACATGGTaGGCTGACCTTAATGGAATT +
Preference number: 2 (lower is better)
Translates to: FSYISVGAMKWFATNRENEKITW*ADLNGI
Trigger: AATTCCATTAAGGTCAGCCCACCATGTAATTTTCTC...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAGATGAGAAAATTACATaGTGGGCTGACCTTAATGGA +
Preference number: 2 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSDEKIT*WADLNG
Trigger: TCCATTAAGGTCAGCCCACCATGTAATTTTCTCATC...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCCGATACACAGCTAATTaGACACCACCATGGCTGTTT +
Preference number: 2 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFRYTAN*TPPWLF
Trigger: AAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCG...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp TTTCACAACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCGTTGGTGCTATGAAGTaGTTTGCCACCAACAGAGAG +
Preference number: 2 (lower is better)
Translates to: FHNITVDSSKGHVFSFFIVGAMK*FATNRE
Trigger: CTCTCTGTTGGTGGCAAACCACTTCATAGCACCAAC...GATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp AATTTTTCAACCTGCCACTTTATCCCTTTCTTCAAGAATGTAAAGCAGAATGCAGTTGGTGCTATGAAGTaGTTTGCCACCAACAGAGAG +
Preference number: 2 (lower is better)
Translates to: NFSTCHFIPFFKNVKQNAVGAMK*FATNRE
Trigger: CTCTCTGTTGGTGGCAAACCACTTCATAGCACCAAC...TGCATTCTGCTTTACATTCTTGAAGAAAGGGATAAAGTGGCAGGTTGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAAGTACTTTCCCAAAGATaGAGCTATTCCATGCATCCT +
Preference number: 2 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAEVLSQR*SYSMHP
Trigger: AGGATGCATGGAATAGCTCCATCTTTGGGAAAGTAC...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTTTGGCCACAAATGTTTaGAGTTCGTTCATGTTGTCT +
Preference number: 2 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLLATNV*SSFMLS
Trigger: AGACAACATGAACGAACTCCAAACATTTGTGGCCAA...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CAA 90 bp CATACAAGACATCAAGTCAGTTCTGATGTGGGTTTTGGATTCTGTTaGAATGTAGCTGTGAATAGAAACCCTCTGCATATGGAGTTCAAT +
Preference number: 2 (lower is better)
Translates to: HTRHQVSSDVGFGFC*NVAVNRNPLHMEFN
Trigger: ATTGAACTCCATATGCAGAGGGTTTCTATTCACAGCTACATTCAAACAGAATCCAAAACCCACATCAGAACTGACTTGATGTCTTGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR-3UTR TCA 90 bp TTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTACCCTCTGTCTCCCTATaGTTGACCCTGAAATTTATT +
Preference number: 2 (lower is better)
Translates to: LLLILPKATFSVSLSRDVPSVSL*LTLKFI
Trigger: AATAAATTTCAGGGTCAATCATAGGGAGACAGAGGG...TACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR TCA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATAGGAATACATAGTTATTaGGGTTATCCTTCTGCCGGT +
Preference number: 2 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGIGIHSY*GYPSAG
Trigger: ACCGGCAGAAGGATAACCTCAATAACTATGTATTCC...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR GCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTAAATGTGTTAGTTTATaGAGCTCTGAACAAGACCAT +
Preference number: 2 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSKCVSL*SSEQDH
Trigger: ATGGTCTTGTTCAGAGCTGCATAAACTAACACATTT...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACTTGAGTGGAAGATTATaGCATGAAGCCGTGTGCAAA +
Preference number: 2 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYLSGRL*HEAVCK
Trigger: TTTGCACACGGCTTCATGCCATAATCTTCCACTCAA...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTCGATACACAGCTAATTaGACACCACCATGGCTGTTT +
Preference number: 2 (lower is better)
Translates to: GIWNIGNHNITIGIQCIIRYTAN*TPPWLF
Trigger: AAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCG...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp TTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATCCTTCGGCAGACAGATaGCATTGTACTTCTTACAGA +
Preference number: 2 (lower is better)
Translates to: FGLTTNHSSVFWEDFLIHPSADR*HCTSYR
Trigger: TCTGTAAGAAGTACAATGCCATCTGTCTGCCGAAGG...ATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTTTCCTACATCTCTGTTaGTGCTATGAAGTGGTTTGC +
Preference number: 2 (lower is better)
Translates to: MNYNEGSTVITNTLICYSFLHLC*CYEVVC
Trigger: GCAAACCACTTCATAGCACCAACAGAGATGTAGGAA...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR TCA 90 bp TTTCACAACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCGTCTTCTGCAAACACTaGTGGCTAGTTATCCCAAAT +
Preference number: 2 (lower is better)
Translates to: FHNITVDSSKGHVFSFFIVFCKH*WLVIPN
Trigger: ATTTGGGATAACTAGCCATCAGTGTTTGCAGAAGAC...GATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR TCA 90 bp TTTCACAACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCTATTCCATGCATCCTTaGGCTTTAAGGGAATCATCC +
Preference number: 2 (lower is better)
Translates to: FHNITVDSSKGHVFSFFIYSMHP*ALRESS
Trigger: GGATGATTCCCTTAAAGCTCAAGGATGCATGGAATA...GATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR GCA 90 bp TTGCCCACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAATGTGTTAGTTTATaGAGCTCTGAACAAGACCAT +
Preference number: 2 (lower is better)
Translates to: LPTCKKIILTKQNAHHEEKCVSL*SSEQDH
Trigger: ATGGTCTTGTTCAGAGCTGCATAAACTAACACATTT...CTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGTGGGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp TTTCACAACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCTACCCTCCAGAACATTaGCCATTACGTATATTTCCC +
Preference number: 2 (lower is better)
Translates to: FHNITVDSSKGHVFSFFIYPPEH*PLRIFP
Trigger: GGGAAATATACGTAATGGCCAATGTTCTGGAGGGTA...GATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp AATTTTTCAACCTGCCACTTTATCCCTTTCTTCAAGAATGTAAAGCAGAATGCATTAGCAGGGCACTATTaGACATCCAACATTTACCCT +
Preference number: 2 (lower is better)
Translates to: NFSTCHFIPFFKNVKQNALAGHY*TSNIYP
Trigger: AGGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAA...TGCATTCTGCTTTACATTCTTGAAGAAAGGGATAAAGTGGCAGGTTGAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp ACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAGAAATTGAGTGGAAGATTATaGCATGAAGCCGTGTGCAAA +
Preference number: 2 (lower is better)
Translates to: TCKKIILTKQNAHHEEKKLSGRL*HEAVCK
Trigger: TTTGCACACGGCTTCATGCCATAATCTTCCACTCAA...TTTCTTCTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CAA 90 bp TGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTTTTTATTTaGTCTGTGTCAGGTTTACATGCACACCATATTGCTTATTCTGTA +
Preference number: 2 (lower is better)
Translates to: CQSHYSADAFLTVFI*SVSGLHAHHIAYSV
Trigger: TACAGAATAAGCAATATGGTGTGCATGTAAACCTGACACAGACAAAATAAAAACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR CAA 90 bp TTTTCCTGTATTTACATTTTTACACCATATGACCGGGCACTTCTGTaGCCTCAGGAGTTATATACATATCAGTTTGCACACGAATTTCAA +
Preference number: 2 (lower is better)
Translates to: FSCIYIFTPYDRALL*PQELYTYQFAHEFQ
Trigger: TTGAAATTCGTGTGCAAACTGATATGTATATAACTCCTGAGGCAACAGAAGTGCCCGGTCATATGGTGTAAAAATGTAAATACAGGAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR-3UTR TCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGATGTGTCTTGGAAATaGACTATAATGAAGGTAGCA +
Preference number: 2 (lower is better)
Translates to: TLLLILPKATFSVSLSRDDVSWK*TIMKVA
Trigger: TGCTACCTTCATTATAGTTCATTTCCAAGACACATC...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR TCA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGGATGTGTCTTGGAAATaGACTATAATGAAGGTAGCA +
Preference number: 2 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWDVSWK*TIMKVA
Trigger: TGCTACCTTCATTATAGTTCATTTCCAAGACACATC...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCGAGAAAATTACATGGTaGGCTGACCTTAATGGAATT +
Preference number: 2 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFEKITW*ADLNGI
Trigger: AATTCCATTAAGGTCAGCCCACCATGTAATTTTCTC...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR GCA 72 bp GGCCTGAATAGGTGGGCATGTTGGAAAGGCAGCTTCTaGAGTGCGTGGAGTTCTGCCGGTATCGCTCGCTGG +
Preference number: 3 (lower is better)
Translates to: GLNRWACWKGSF*SAWSSAGIARW
Trigger: CCAGCGAGCGATACCGGCAGAACTCCACGCACTGCAGAAGCTGCCTTTCCAACATGCCCACCTATTCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp GTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTCAACAAACTGGGGTCCCTCGGGCCTTaGGCTCCAGATGTGTCTTGG +
Preference number: 3 (lower is better)
Translates to: VGVREVHVLGQGHIFNKLGSLGP*APDVSW
Trigger: CCAAGACACATCTGGAGCCAAAGGCCCGAGGGACCC...CAGTTTGTTGAAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGACCCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp CCGAAGATAGCTGTCATTCACCGCCTGGGATGGCAACGAGTGTTTGTAAGGGTCAGGGGTTCCGGTTCATaGGCAGCGTGGAGTCCCCCT +
Preference number: 3 (lower is better)
Translates to: PKIAVIHRLGWQRVFVRVRGSGS*AAWSPP
Trigger: AGGGGGACTCCACGCTGCCAATGAACCGGAACCCCT...GACCCTTACAAACACTCGTTGCCATCCCAGGCGGTGAATGACAGCTATCTTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR GCA 72 bp ATGTTGGAAAGGCAGCTTCTGCAGTGCGTGGAGTTCTaGCGGTATCGCTCGCTGGTCTCACTGTGCGGGGAA +
Preference number: 3 (lower is better)
Translates to: MLERQLLQCVEF*RYRSLVSLCGE
Trigger: TTCCCCGCACAGTGAGACCAGCGAGCGATACCGGCAGAACTCCACGCACTGCAGAAGCTGCCTTTCCAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 72 bp TTCTGCAGTGCGTGGAGTTCTGCCGGTATCGCTCGCTaGTCTCACTGTGCGGGGAACCCTTGTCTTTCAAGG +
Preference number: 3 (lower is better)
Translates to: FCSAWSSAGIAR*SHCAGNPCLSR
Trigger: CCTTGAAAGACAAGGGTTCCCCGCACAGTGAGACCAGCGAGCGATACCGGCAGAACTCCACGCACTGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 72 bp AGGTGGGCATGTTGGAAAGGCAGCTTCTGCAGTGCGTaGAGTTCTGCCGGTATCGCTCGCTGGTCTCACTGT +
Preference number: 3 (lower is better)
Translates to: RWACWKGSFCSA*SSAGIARWSHC
Trigger: ACAGTGAGACCAGCGAGCGATACCGGCAGAACTCCACGCACTGCAGAAGCTGCCTTTCCAACATGCCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp GTGCGTGGAGTTCTGCCGGTATCGCTCGCTGGTCTCACTGTGCGGGGAACCCTTTTATCCTTCTGCCGGTaGGCCACAAATGTTTGGAGT +
Preference number: 3 (lower is better)
Translates to: VRGVLPVSLAGLTVRGTLLSFCR*ATNVWS
Trigger: ACTCCAAACATTTGTGGCCAACCGGCAGAAGGATAA...AAGGGTTCCCCGCACAGTGAGACCAGCGAGCGATACCGGCAGAACTCCACGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR TCA 72 bp GTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTaGCCTCAAGGACGACCGAAGATAGCTGTCATTCAC +
Preference number: 3 (lower is better)
Translates to: VAPTVPGTVRCR*PQGRPKIAVIH
Trigger: GTGAATGACAGCTATCTTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR GCA 72 bp GTGGAGTTCTGCCGGTATCGCTCGCTGGTCTCACTGTaGGGGGAACCCTTGTCTTTCAAGGTGAAGTGCTTG +
Preference number: 3 (lower is better)
Translates to: VEFCRYRSLVSL*GEPLSFKVKCL
Trigger: CAAGCACTTCACCTTGAAAGACAAGGGTTCCCCGCACAGTGAGACCAGCGAGCGATACCGGCAGAACTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR GCA 72 bp CGGAGGTGTGGTCTGGCAAGAGAGACTTGCTCCTCTTaGTGTCCTCCAGACCTTGGGGGAAAAGGGAGCTTT +
Preference number: 3 (lower is better)
Translates to: RRCGLARETCSS*CPPDLGGKGSF
Trigger: AAAGCTCCCTTTTCCCCCAAGGTCTGGAGGACAGCAAGAGGAGCAAGTCTCTCTTGCCAGACCACACCTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 72 bp TCCCTGTGGGAGTGGAGGAAAGGGTTATCGGAGGTGTaGTCTGGCAAGAGAGACTTGCTCCTCTTGCTGTCC +
Preference number: 3 (lower is better)
Translates to: SLWEWRKGLSEV*SGKRDLLLLLS
Trigger: GGACAGCAAGAGGAGCAAGTCTCTCTTGCCAGACCACACCTCCGATAACCCTTTCCTCCACTCCCACAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 72 bp GGGAGACTGGATTCTGGGATAGTGAATCCTGGCGTATaGAATCCACGGATTTCTTCCACAGCTGCCGGGGTC +
Preference number: 3 (lower is better)
Translates to: GRLDSGIVNPGV*NPRISSTAAGV
Trigger: GACCCCGGCAGCTGTGGAAGAAATCCGTGGATTCCATACGCCAGGATTCACTATCCCAGAATCCAGTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 72 bp CTCCCAATAACCAAGCGTTGGTCATCCCTGTGGGAGTaGAGGAAAGGGTTATCGGAGGTGTGGTCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: LPITKRWSSLWE*RKGLSEVWSGK
Trigger: CTTGCCAGACCACACCTCCGATAACCCTTTCCTCCACTCCCACAGGGATGACCAACGCTTGGTTATTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 72 bp GGGCATCTCCCAATAACCAAGCGTTGGTCATCCCTGTaGGAGTGGAGGAAAGGGTTATCGGAGGTGTGGTCT +
Preference number: 3 (lower is better)
Translates to: GHLPITKRWSSL*EWRKGLSEVWS
Trigger: AGACCACACCTCCGATAACCCTTTCCTCCACTCCCACAGGGATGACCAACGCTTGGTTATTGGGAGATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp GCATCTGGTCTTCATCGATGTCATAGAGGTTCCCCATCCGCAGGCAGGCATCGCTGGGATCCCGTCAGATaGAAGTCTGGAGACTTCTTC +
Preference number: 3 (lower is better)
Translates to: ASGLHRCHRGSPSAGRHRWDPVR*KSGDFF
Trigger: GAAGAAGTCTCCAGACTTCAATCTGACGGGATCCCA...GCGATGCCTGCCTGCGGATGGGGAACCTCTATGACATCGATGAAGACCAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp GGACGACCGAAGATAGCTGTCATTCACCGCCTGGGATGGCAACGAGTGTTTGTAGGTCTAGAGTTCGCTTaGGATTCTGTGCTCACGGCC +
Preference number: 3 (lower is better)
Translates to: GRPKIAVIHRLGWQRVFVGLEFA*DSVLTA
Trigger: GGCCGTGAGCACAGAATCCAAAGCGAACTCTAGACC...TACAAACACTCGTTGCCATCCCAGGCGGTGAATGACAGCTATCTTCGGTCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR GCA 72 bp TCCTGGCGTATGGAATCCACGGATTTCTTCCACAGCTaGCGGGGTCTAGAGTTCGCTTTGGATTCTGTGCTC +
Preference number: 3 (lower is better)
Translates to: SWRMESTDFFHS*RGLEFALDSVL
Trigger: GAGCACAGAATCCAAAGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATCCGTGGATTCCATACGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR GCA 72 bp AAGGGTTATCGGAGGTGTGGTCTGGCAAGAGAGACTTaGTCCTCTTGCTGTCCTCCAGACCTTGGGGGAAAA +
Preference number: 3 (lower is better)
Translates to: KGYRRCGLARET*SSCCPPDLGGK
Trigger: TTTTCCCCCAAGGTCTGGAGGACAGCAAGAGGAGCAAGTCTCTCTTGCCAGACCACACCTCCGATAACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 72 bp CCGAAATATACACATCATTGTGGCCCCGACTGTCCCTaGAACAGTACGATGCCGTTGACCTCAAGGACGACC +
Preference number: 3 (lower is better)
Translates to: PKYTHHCGPDCP*NSTMPLTSRTT
Trigger: GGTCGTCCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
3UTR TCA 72 bp GAGGCACATGTCATAATGCAAGGCTGGGAGGAGGCATaGTTTGGCAAGGACTGGAGAACTGGTTGGAACCAG +
Preference number: 3 (lower is better)
Translates to: EAHVIMQGWEEA*FGKDWRTGWNQ
Trigger: CTGGTTCCAACCAGTTCTCCAGTCCTTGCCAAATCATGCCTCCTCCCAGCCTTGCATTATGACATGTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 72 bp AGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGGTaGATTAAGGTCTGGAATGCACTGGAAGGGCAGAAG +
Preference number: 3 (lower is better)
Translates to: RLMRKWRRSLLG*IKVWNALEGQK
Trigger: CTTCTGCCCTTCCAGTGCATTCCAGACCTTAATCCACCCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CCA 72 bp TCCCTCTGGGAGACTGGATTCTGGGATAGTGAATCCTaGCGTATGGAATCCACGGATTTCTTCCACAGCTGC +
Preference number: 3 (lower is better)
Translates to: SLWETGFWDSES*RMESTDFFHSC
Trigger: GCAGCTGTGGAAGAAATCCGTGGATTCCATACGCCAGGATTCACTATCCCAGAATCCAGTCTCCCAGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp CCTGAAGCATCTGGTCTTCATCGATGTCATAGAGGTTCCCCATCCGCAGGCAGGCTTAGCAGGGCACTATaGGACATCCAACATTTACCC +
Preference number: 3 (lower is better)
Translates to: PEASGLHRCHRGSPSAGRLSRAL*DIQHLP
Trigger: GGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAAG...CCTGCCTGCGGATGGGGAACCTCTATGACATCGATGAAGACCAGATGCTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp TTAGGGAGTGGGTCCTATTCTCTGCTGTTGCCTCATCCCTCTGGGAGACTGGATGAAATATACACATCATaGTGGCCCCGACTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: LGSGSYSLLLPHPSGRLDEIYTS*WPRLSL
Trigger: CAGGGACAGTCGGGGCCACAATGATGTGTATATTTC...ATCCAGTCTCCCAGAGGGATGAGGCAACAGCAGAGAATAGGACCCACTCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTGGGTCCCTCGGGCCTTaGGCTCCAGATGTGTCTTGG +
Preference number: 3 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLGSLGP*APDVSW
Trigger: CCAAGACACATCTGGAGCCAAAGGCCCGAGGGACCC...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGGCTGTCCTCCAGACCTaGGGGGAAAAGGGAGCTTTT +
Preference number: 3 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVAVLQT*GEKGAF
Trigger: AAAAGCTCCCTTTTCCCCCAAGGTCTGGAGGACAGC...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR GCA 72 bp TTATACTGGTCGTTGTTGGAAAGCCCCTCTTCATTATaGAAGGGGTTCCGGTTCATTGGCAGCGTGGAGTCC +
Preference number: 3 (lower is better)
Translates to: LYWSLLESPSSL*KGFRFIGSVES
Trigger: GGACTCCACGCTGCCAATGAACCGGAACCCCTTGCATAATGAAGAGGGGCTTTCCAACAACGACCAGTATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 72 bp TGTGGTTCTTACTGTTGTCAGGTTCCCTGTGGCACGTaGCCCGATTTGACGTTTCTGAAATGTCAGAGTGGG +
Preference number: 3 (lower is better)
Translates to: CGSYCCQVPCGT*PDLTFLKCQSG
Trigger: CCCACTCTGACATTTCAGAAACGTCAAATCGGGCCACGTGCCACAGGGAACCTGACAACAGTAAGAACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 72 bp TCCACGTTCTCGGGCAGGGTCACATTTTCAACAAACTaGGGTGGATCTAAGTGGAAACCAGGCTCCTTCTCA +
Preference number: 3 (lower is better)
Translates to: STFSGRVTFSTN*GGSKWKPGSFS
Trigger: TGAGAAGGAGCCTGGTTTCCACTTAGATCCACCCCAGTTTGTTGAAAATGTGACCCTGCCCGAGAACGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp TGGGATCCTGGTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTATCATAACATCACCATaGGCATCCAATGCATCATTA +
Preference number: 3 (lower is better)
Translates to: WDPGRGPGSPRSRAGSHFIITSP*ASNASL
Trigger: TAATGATGCATTGGATGCCAATGGTGATGTTATGAT...AAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGACCCCTACCAGGATCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 72 bp CACGTGGCCCGATTTGACGTTTCTGAAATGTCAGAGTaGGCCATCTCTTCTGGAAGATACCTAGGGCTCTTT +
Preference number: 3 (lower is better)
Translates to: HVARFDVSEMSE*AISSGRYLGLF
Trigger: AAAGAGCCCTAGGTATCTTCCAGAAGAGATGGCCCACTCTGACATTTCAGAAACGTCAAATCGGGCCACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAACTTAGCAGGGCACTATaGGACATCCAACATTTACCC +
Preference number: 3 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQLSRAL*DIQHLP
Trigger: GGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAAG...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CAA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGCACCACCATGGCTGTTaGGAAACGGAACGAGTTATG +
Preference number: 3 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVHHHGC*ETERVM
Trigger: CATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTG...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR TCA 72 bp GTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTaGGTGGAAGATTATGGCATGAAGCCGTGTGCAAAA +
Preference number: 3 (lower is better)
Translates to: VCHAQHTPHKIP*VEDYGMKPCAK
Trigger: TTTTGCACACGGCTTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR TCA 72 bp CAGAGACCCAACCGTTTGCATTCAAGTGTACCTATCTaGGGACTAGTTGGGTCCTTCTCAAGTGGGGAAAAC +
Preference number: 3 (lower is better)
Translates to: QRPNRLHSSVPI*GLVGSFSSGEN
Trigger: GTTTTCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATAGGTACACTTGAATGCAAACGGTTGGGTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR TCA 72 bp AGAAATCTTTGGGGACCCTCAGGTTTGGAAGGCATCTaGGCCACATCTAACTATGTCACTGCTGTGTCAAGC +
Preference number: 3 (lower is better)
Translates to: RNLWGPSGLEGI*ATSNYVTAVSS
Trigger: GCTTGACACAGCAGTGACATAGTTAGATGTGGCTCAGATGCCTTCCAAACCTGAGGGTCCCCAAAGATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR TCA 72 bp TGGTCTCACTGTGCGGGGAACCCTTGTCTTTCAAGGTaGAGTGCTTGGAGTAGAGTTTATACTGGTCGTTGT +
Preference number: 3 (lower is better)
Translates to: WSHCAGNPCLSR*SAWSRVYTGRC
Trigger: ACAACGACCAGTATAAACTCTACTCCAAGCACTTCACCTTGAAAGACAAGGGTTCCCCGCACAGTGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR GCA 72 bp ACTTCCCTGTCACAGAGGCTGATACTCAAGGGTATATaGCCAGGAACCTCAAAAGAGCACACCTCTCTTTCT +
Preference number: 3 (lower is better)
Translates to: TSLSQRLILKGI*PGTSKEHTSLS
Trigger: AGAAAGAGAGGTGTGCTCTTTTGAGGTTCCTGGGCATATACCCTTGAGTATCAGCCTCTGTGACAGGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 72 bp CCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTaGACATCCAACATTTACCCTCCAGAACATTGGCCA +
Preference number: 3 (lower is better)
Translates to: PPYIFFLLAGHY*TSNIYPPEHWP
Trigger: TGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR CCA 72 bp TCATTCATGTCAAAACATCCCAGACTCATGAGGAAATaGAGGCGATCCTTGCTGGGGTGGATTAAGGTCTGG +
Preference number: 3 (lower is better)
Translates to: SFMSKHPRLMRK*RRSLLGWIKVW
Trigger: CCAGACCTTAATCCACCCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CCA 72 bp GCATGCCTGCAGGATATGTTAAACATTAGGCCATTCTaGGTACCTATAAAGCCCGGTGGAAGCGTTCCAGTT +
Preference number: 3 (lower is better)
Translates to: ACLQDMLNIRPF*VPIKPGGSVPV
Trigger: AACTGGAACGCTTCCACCGGGCTTTATAGGTACCCAGAATGGCCTAATGTTTAACATATCCTGCAGGCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR-3UTR CAA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTGGGTCCCTCGGGCCTTaGGCTCCAGATGTGTCTTGG +
Preference number: 3 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVGSLGP*APDVSW
Trigger: CCAAGACACATCTGGAGCCAAAGGCCCGAGGGACCC...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCACCACCATGGCTGTTaGGAAACGGAACGAGTTATG +
Preference number: 3 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHHHHGC*ETERVM
Trigger: CATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTG...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTCACCACCATGGCTGTTaGGAAACGGAACGAGTTATG +
Preference number: 3 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSHHHGC*ETERVM
Trigger: CATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTG...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp AAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCATTGTACTTCTTACAGAACAGTACGATGCCGTaGACCTCAAGGACGACCGAA +
Preference number: 3 (lower is better)
Translates to: KPKTMLAFGRQMALYFLQNSTMP*TSRTTE
Trigger: TTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGTT...CTGTAAGAAGTACAATGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535259.6
3UTR-3UTR CAA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCAACAGTACGATGCCGTaGACCTCAAGGACGACCGAA +
Preference number: 3 (lower is better)
Translates to: EAVCKRANNNNNKIPPYINSTMP*TSRTTE
Trigger: TTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGTT...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
3UTR-3UTR CAA 90 bp TTCTCGGGCAGGGTCACATTTTCAACAAACTGGGGTGGATCTAAGTGGAAACCATGGGTGAGTCCATTCTaGAGGAGTTCATGTTGGACA +
Preference number: 3 (lower is better)
Translates to: FSGRVTFSTNWGGSKWKPWVSPF*RSSCWT
Trigger: TGTCCAACATGAACTCCTCAAGAATGGACTCACCCA...TGGTTTCCACTTAGATCCACCCCAGTTTGTTGAAAATGTGACCCTGCCCGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTAGATGAGGGAACCTCTTaGGATGAAGTCAGCAGCTCT +
Preference number: 3 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVDEGTS*DEVSSS
Trigger: AGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCATC...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTCTTAGCAGGGCACTATaGGACATCCAACATTTACCC +
Preference number: 3 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPLSRAL*DIQHLP
Trigger: GGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAAG...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTAGGAGTTTTAACATGTaGCTCTGGGATCCCGTCAGA +
Preference number: 3 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPRSFNM*LWDPVR
Trigger: TCTGACGGGATCCCAGAGCAACATGTTAAAACTCCT...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGAAGTTTATACTGGTCGTaGTTGGAAAGCCCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: LASNASLLPTYPVGMSRRSLYWS*LESPSS
Trigger: TGAAGAGGGGCTTTCCAACAACGACCAGTATAAACT...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR TCA 72 bp GTACTTTCCCAAAGATGGAGCTATTCCATGCATCCTTaGGCTTTAAGGGAATCATCCCTGACACTTGCCCAC +
Preference number: 3 (lower is better)
Translates to: VLSQRWSYSMHP*ALRESSLTLAH
Trigger: GTGGGCAAGTGTCAGGGATGATTCCCTTAAAGCTCAAGGATGCATGGAATAGCTCCATCTTTGGGAAAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR TCA 72 bp GAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTaGCGACAAATCACTCTTCTGTATTCTGGGAAGACT +
Preference number: 3 (lower is better)
Translates to: EDTRGRQKASLA*RQITLLYSGKT
Trigger: AGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR TCA 72 bp AATAATGCTGCTGTTAGGGGAAGGCTTTCTGACCGATaGAGTCAGTCCAAGTATAACTCTCACTCTCCCTGG +
Preference number: 3 (lower is better)
Translates to: NNAAVRGRLSDR*SQSKYNSHSPW
Trigger: CCAGGGAGAGTGAGAGTTATACTTGGACTGACTTCATCGGTCAGAAAGCCTTCCCCTAACAGCAGCATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR TCA 72 bp ACCATCTATAGTGTAGATCTTGTCTCTAGGGGAGCTTaGTTTGGTTTTCAGGTAGGTGCGCTCGACCTCACT +
Preference number: 3 (lower is better)
Translates to: TIYSVDLVSRGA*FGFQVGALDLT
Trigger: AGTGAGGTCGAGCGCACCTACCTGAAAACCAAATCAAGCTCCCCTAGAGACAAGATCTACACTATAGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR GCA 72 bp TTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATaGTCAGCACACACCTCACAAGATTCCTTGAGTGGA +
Preference number: 3 (lower is better)
Translates to: FLVKDSPIWCLP*SAHTSQDSLSG
Trigger: TCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR GCA 72 bp AATGAAGGTAGCACAGTCATCACGAACACACTGATTTaGTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTG +
Preference number: 3 (lower is better)
Translates to: NEGSTVITNTLI*YSLGEPGVLGV
Trigger: CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR CCA 72 bp GCACACACCTCACAAGATTCCTTGAGTGGAAGATTATaGCATGAAGCCGTGTGCAAAAGAGCCAACAACAAC +
Preference number: 3 (lower is better)
Translates to: AHTSQDSLSGRL*HEAVCKRANNN
Trigger: GTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR CCA 72 bp TTTTTGGCTGACCGGAGGAGTTTTAACATGTTGCTCTaGGATCCCGTCAGATTGAAGTCTGGAGACTTCTTC +
Preference number: 3 (lower is better)
Translates to: FLADRRSFNMLL*DPVRLKSGDFF
Trigger: GAAGAAGTCTCCAGACTTCAATCTGACGGGATCCCAGAGCAACATGTTAAAACTCCTCCGGTCAGCCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 72 bp TTGGTTTTGTGGTTCTTACTGTTGTCAGGTTCCCTGTaGCACGTGGCCCGATTTGACGTTTCTGAAATGTCA +
Preference number: 3 (lower is better)
Translates to: LVLWFLLLSGSL*HVARFDVSEMS
Trigger: TGACATTTCAGAAACGTCAAATCGGGCCACGTGCCACAGGGAACCTGACAACAGTAAGAACCACAAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACCTTAGCAGGGCACTATaGGACATCCAACATTTACCC +
Preference number: 3 (lower is better)
Translates to: SYISVGAMKWFATNRENNLSRAL*DIQHLP
Trigger: GGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAAG...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCAAAACTTCCTAATCTCTaGCACATGTCAATCGCACTA +
Preference number: 3 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLAKLPNL*HMSIAL
Trigger: TAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTT...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCCACGAACACACTGATTaGCTATTCTTTAGGGGAGCC +
Preference number: 3 (lower is better)
Translates to: LGDINVLVYAALNKTIEAHEHTD*LFFRGA
Trigger: GGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCATGCTGGAAATGTTTTaGGCTGACCGGAGGAGTTTT +
Preference number: 3 (lower is better)
Translates to: SPLASNASLLPTYPVGMSMLEMF*ADRRSF
Trigger: AAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCAT...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR TCA 72 bp TTATGCAGCTCTGAACAAGACCATCGAAGCCGAGGGTaGGAGAAACACACATCAACATCCAAAGAGATTCCT +
Preference number: 3 (lower is better)
Translates to: LCSSEQDHRSRG*EKHTSTSKEIP
Trigger: AGGAATCTCTTTGGATGTTGATGTGTGTTTCTCTCACCCTCGGCTTCGATGGTCTTGTTCAGAGCTGCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR CCA 72 bp CCCACAGCACTTTCAACCCTGTTCACCAAAAAGAGATaGGGTATCTGGAAAGGTCTAATTTTGTCTCCAGTG +
Preference number: 3 (lower is better)
Translates to: PTALSTLFTKKR*GIWKGLILSPV
Trigger: CACTGGAGACAAAATTAGACCTTTCCAGATACCCCATCTCTTTTTGGTGAACAGGGTTGAAAGTGCTGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR-3UTR CAA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAACACGAACACACTGATTaGCTATTCTTTAGGGGAGCC +
Preference number: 3 (lower is better)
Translates to: FFLHLCWCYEVVCHQQREHEHTD*LFFRGA
Trigger: GGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATCACGAACACACTGATTaGCTATTCTTTAGGGGAGCC +
Preference number: 3 (lower is better)
Translates to: FSYISVGAMKWFATNRENHEHTD*LFFRGA
Trigger: GGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTCTTGAGGAGTTCATGTaGGACATGCTGGAAATGTTT +
Preference number: 3 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPLEEFM*DMLEMF
Trigger: AAACATTTCCAGCATGTCCAACATGAACTCCTCAAG...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCAGAGAGTAAGAGGATGTaGTCCCTGGAATACATAGTT +
Preference number: 3 (lower is better)
Translates to: EPNFLISCTCQSHYSADAESKRM*SLEYIV
Trigger: AACTATGTATTCCAGGGACAACATCCTCTTACTCTC...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR TCA 72 bp CACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATaGAGCCGTGTGCAAAAGAGCCAACAACAACAACAA +
Preference number: 3 (lower is better)
Translates to: HLTRFLEWKIMA*SRVQKSQQQQQ
Trigger: TTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR GCA 72 bp CTATTGGTCAAATCGTTCTTTGGAGTGCTCCATTTCTaGATAGCTCAACATTCCAAGGAGAACATGGTCACG +
Preference number: 3 (lower is better)
Translates to: LLVKSFFGVLHF*IAQHSKENMVT
Trigger: CGTGACCATGTTCTCCTTGGAATGTTGAGCTATGCAGAAATGGAGCACTCCAAAGAACGATTTGACCAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 72 bp TTATCTGAAACCATGTCCATGATGAGGGAACCTCTTTaGATGAAGTCAGCAGCTCTTTTGGGTGAGTCCATT +
Preference number: 3 (lower is better)
Translates to: LSETMSMMREPL*MKSAALLGESI
Trigger: AATGGACTCACCCAAAAGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCATCATGGACATGGTTTCAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CCA 72 bp TTGAGGTTATCCTTCTGCCGGTTGGCCACAAATGTTTaGAGTTCGTTCATGTTGTCTCCAAAAATGCTCTCT +
Preference number: 3 (lower is better)
Translates to: LRLSFCRLATNV*SSFMLSPKMLS
Trigger: AGAGAGCATTTTTGGAGACAACATGAACGAACTCCAAACATTTGTGGCCAACCGGCAGAAGGATAACCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp TCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCTTAGCAGGGCACTATaGGACATCCAACATTTACCC +
Preference number: 3 (lower is better)
Translates to: SILGIFLYTRLLLQEFKTLSRAL*DIQHLP
Trigger: GGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAAG...GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
3UTR-3UTR CAA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTACCTCACAAGATTCCTaGAGTGGAAGATTATGGCAT +
Preference number: 3 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLTSQDS*SGRLWH
Trigger: ATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGT...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CAA 90 bp AGTAGAGTTTATACTGGTCGTTGTTGGAAAGCCCCTCTTCATTATGCAAGGGGTACCTCACAAGATTCCTaGAGTGGAAGATTATGGCAT +
Preference number: 3 (lower is better)
Translates to: SRVYTGRCWKAPLHYARGTSQDS*SGRLWH
Trigger: ATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGT...ACCCCTTGCATAATGAAGAGGGGCTTTCCAACAACGACCAGTATAAACTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTTCCAATGCATCATTATaGCCAACATACCCAGTAGGC +
Preference number: 3 (lower is better)
Translates to: NPDLRKCHNIATILSGALSNASL*PTYPVG
Trigger: GCCTACTGGGTATGTTGGCAATAATGATGCATTGGA...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTTCCAATGCATCATTATaGCCAACATACCCAGTAGGC +
Preference number: 3 (lower is better)
Translates to: PNLLHMSIALQCRCILNCSNASL*PTYPVG
Trigger: GCCTACTGGGTATGTTGGCAATAATGATGCATTGGA...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CAA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGATCATAACATCACCATaGGCATCCAATGCATCATTA +
Preference number: 3 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVIITSP*ASNASL
Trigger: TAATGATGCATTGGATGCCAATGGTGATGTTATGAT...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CAA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCAGGCTCCAGATGTGTCTaGGAAATGAACTATAATGAA +
Preference number: 3 (lower is better)
Translates to: EPNFLISCTCQSHYSADAGSRCV*EMNYNE
Trigger: TTCATTATAGTTCATTTCCAAGACACATCTGGAGCC...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CAA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCGAAATATACACATCATaGTGGCCCCGACTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFEIYTS*WPRLSL
Trigger: CAGGGACAGTCGGGGCCACAATGATGTGTATATTTC...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
3UTR-3UTR CAA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCACCGTGTTAGGGTaGGACTCATTGAGAGTAAGA +
Preference number: 3 (lower is better)
Translates to: ALLDIQHLPSRTLAITYISTVLG*DSLRVR
Trigger: TCTTACTCTCAATGAGTCCAACCCTAACACGGTGGA...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR TCA 72 bp CAATTTAGTTCTGGTTCCCTGGAGAGTTGCATGCTTTaGAATACAACCCCCAGAGAAGAAATGCTATTGGTC +
Preference number: 3 (lower is better)
Translates to: QFSSGSLESCML*NTTPREEMLLV
Trigger: GACCAATAGCATTTCTTCTCTGGGGGTTGTATTTCAAAGCATGCAACTCTCCAGGGAACCAGAACTAAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR GCA 72 bp GCTCAGAGCATTGAAACCATAAGTGGCCTAAGAACCTaGAGATGTAAGGATGATGAAACCCATTTTCCAGAA +
Preference number: 3 (lower is better)
Translates to: AQSIETISGLRT*RCKDDETHFPE
Trigger: TTCTGGAAAATGGGTTTCATCATCCTTACATCTGCAGGTTCTTAGGCCACTTATGGTTTCAATGCTCTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR GCA 72 bp TCAATCATTCTGACTACCAAAGCTCTCCATCATTCATaGAGAAACTCTATTTCCTATTCCCTGTCCCACCTC +
Preference number: 3 (lower is better)
Translates to: SIILTTKALHHS*RNSISYSLSHL
Trigger: GAGGTGGGACAGGGAATAGGAAATAGAGTTTCTGCATGAATGATGGAGAGCTTTGGTAGTCAGAATGATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 72 bp AGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTaGTTTGCCACCAACAGAGAGAATAACTCAGAAGGG +
Preference number: 3 (lower is better)
Translates to: RNFSYISVGAMK*FATNRENNSEG
Trigger: CCCTTCTGAGTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CCA 72 bp CCGTTTGCATTCAAGTGTACCTATCTGAGGACTAGTTaGGTCCTTCTCAAGTGGGGAAAACCAATTAGAATT +
Preference number: 3 (lower is better)
Translates to: PFAFKCTYLRTS*VLLKWGKPIRI
Trigger: AATTCTAATTGGTTTTCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATAGGTACACTTGAATGCAAACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 72 bp TATTTTAAATTGGTTGCATGTGCGTGCTATTACCCATaGACAGAGACCCAACCGTTTGCATTCAAGTGTACC +
Preference number: 3 (lower is better)
Translates to: YFKLVACACYYP*TETQPFAFKCT
Trigger: GGTACACTTGAATGCAAACGGTTGGGTCTCTGTCCATGGGTAATAGCACGCACATGCAACCAATTTAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 72 bp ACTTGCATTAAGTTAGCTAACTCTCCAGAGAATTCATaGAGACTCCCAGAAAGACATTCCTTCAAATCCCCG +
Preference number: 3 (lower is better)
Translates to: TCIKLANSPENS*RLPERHSFKSP
Trigger: CGGGGATTTGAAGGAATGTCTTTCTGGGAGTCTCCATGAATTCTCTGGAGAGTTAGCTAACTTAATGCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 72 bp CCCCAGAGAAGAAATGCTATTGGTCAAATCGTTCTTTaGAGTGCTCCATTTCTGCATAGCTCAACATTCCAA +
Preference number: 3 (lower is better)
Translates to: PQRRNAIGQIVL*SAPFLHSSTFQ
Trigger: TTGGAATGTTGAGCTATGCAGAAATGGAGCACTCCAAAGAACGATTTGACCAATAGCATTTCTTCTCTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR-3UTR CAA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATTACCCTCCAGAACATaGGCCATTACGTATATTTCC +
Preference number: 3 (lower is better)
Translates to: FFLHLCWCYEVVCHQQRELPSRT*AITYIS
Trigger: GGAAATATACGTAATGGCCAATGTTCTGGAGGGTAA...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAAACCTCACAAGATTCCTaGAGTGGAAGATTATGGCAT +
Preference number: 3 (lower is better)
Translates to: FFLHLCWCYEVVCHQQRETSQDS*SGRLWH
Trigger: ATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGT...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp AAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCATTGTACTTCTTACAGAAACTTCCTAATCTCTaGCACATGTCAATCGCACTA +
Preference number: 3 (lower is better)
Translates to: KPKTMLAFGRQMALYFLQKLPNL*HMSIAL
Trigger: TAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTT...CTGTAAGAAGTACAATGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCAACTGTATCCACAGTTaGGAGGATACTCAGGGTAGA +
Preference number: 3 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFNCIHS*EDTQGR
Trigger: TCTACCCTGAGTATCCTCCAAACTGTGGATACAGTT...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTTAGGGTTGGACTCATaGAGAGTAAGAGGATGTTGT +
Preference number: 3 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSLGLDS*RVRGCC
Trigger: ACAACATCCTCTTACTCTCAATGAGTCCAACCCTAA...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR TCA 72 bp CTTTCAGCTCCACCATACAAGACATCAAGTCAGTTCTaGTGTGGGTTTTGGATTCTGTTTGAATGTAGCTGT +
Preference number: 3 (lower is better)
Translates to: LSAPPYKTSSQF*CGFWILFECSC
Trigger: ACAGCTACATTCAAACAGAATCCAAAACCCACATCAGAACTGACTTGATGTCTTGTATGGTGGAGCTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR GCA 72 bp GTTGCATGCTTTGAAATACAACCCCCAGAGAAGAAATaGTATTGGTCAAATCGTTCTTTGGAGTGCTCCATT +
Preference number: 3 (lower is better)
Translates to: VACFEIQPPEKK*YWSNRSLECSI
Trigger: AATGGAGCACTCCAAAGAACGATTTGACCAATAGCATTTCTTCTCTGGGGGTTGTATTTCAAAGCATGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 72 bp GGCTCCTTGACATCAACAAATCTAAGAACTCAGAGCTaGGATATGTTACGGGAATCTTCTGTGATAGATCTA +
Preference number: 3 (lower is better)
Translates to: GSLTSTNLRTQS*DMLRESSVIDL
Trigger: TAGATCTATCACAGAAGATTCCCGTAACATATCCCAGCTCTGAGTTCTTAGATTTGTTGATGTCAAGGAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR-3UTR CAA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCATTACCCTCCAGAACATaGGCCATTACGTATATTTCC +
Preference number: 3 (lower is better)
Translates to: RANNNNNKIPPYIFFLLALPSRT*AITYIS
Trigger: GGAAATATACGTAATGGCCAATGTTCTGGAGGGTAA...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CAA 90 bp CGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGAATCATAACATCACCATaGGCATCCAATGCATCATTA +
Preference number: 3 (lower is better)
Translates to: RRHKCVSLCSSEQDHRSRIITSP*ASNASL
Trigger: TAATGATGCATTGGATGCCAATGGTGATGTTATGAT...TCGGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGAAACTTCCTAATCTCTaGCACATGTCAATCGCACTA +
Preference number: 3 (lower is better)
Translates to: PPTERITQKGEIACLTKLKLPNL*HMSIAL
Trigger: TAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTT...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp ACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGCAGACAGATGGCATaGTACTTCTTACAGATCACA +
Preference number: 3 (lower is better)
Translates to: TVDSSKGHVFSFFIQRCMGRQMA*YFLQIT
Trigger: TGTGATCTGTAAGAAGTACAATGCCATCTGTCTGCC...CATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCATTGTACACGCGTCTATaGCTGCAGGAATTTAAAACC +
Preference number: 3 (lower is better)
Translates to: RANNNNNKIPPYIFFLLALYTRL*LQEFKT
Trigger: GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
3UTR-3UTR CAA 90 bp TTGCCCACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGATACTAGGCATTTTCTaGTACACGCGTCTATTGCTG +
Preference number: 3 (lower is better)
Translates to: LPTCKKIILTKQNAHHEEILGIF*YTRLLL
Trigger: CAGCAATAGACGCGTGTACAAGAAAATGCCTAGTAT...CTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGTGGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535259.6
3UTR-3UTR CAA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCATGGAGTTCGTTCATGTaGTCTCCAAAAATGCTCTCT +
Preference number: 3 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSWSSFM*SPKMLS
Trigger: AGAGAGCATTTTTGGAGACAACATGAACGAACTCCA...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR-3UTR CAA 90 bp ACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAGAAACTTAGCAGGGCACTATaGGACATCCAACATTTACCC +
Preference number: 3 (lower is better)
Translates to: TCKKIILTKQNAHHEEKKLSRAL*DIQHLP
Trigger: GGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAAG...TTTCTTCTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTATCATAACATCACCATaGGCATCCAATGCATCATTA +
Preference number: 3 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSIITSP*ASNASL
Trigger: TAATGATGCATTGGATGCCAATGGTGATGTTATGAT...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CAA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGGGCAGACAGATGGCATaGTACTTCTTACAGATCACA +
Preference number: 3 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWGRQMA*YFLQIT
Trigger: TGTGATCTGTAAGAAGTACAATGCCATCTGTCTGCC...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCTTGAAGGCTTTTGATTaGAGGAGTTTGGGGTGGAAG +
Preference number: 3 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFLKAFD*RSLGWK
Trigger: CTTCCACCCCAAACTCCTCAAATCAAAAGCCTTCAA...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCTTGTACACGCGTCTATaGCTGCAGGAATTTAAAACC +
Preference number: 3 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFLYTRL*LQEFKT
Trigger: GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
3UTR-3UTR CAA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCATACTAGGCATTTTCTaGTACACGCGTCTATTGCTG +
Preference number: 3 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFILGIF*YTRLLL
Trigger: CAGCAATAGACGCGTGTACAAGAAAATGCCTAGTAT...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
3UTR-3UTR CAA 90 bp TCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCAAGTTGTCCTTGGTTTaGTGGTTCTTACTGTTGTCA +
Preference number: 3 (lower is better)
Translates to: SILGIFLYTRLLLQEFKTKLSLV*WFLLLS
Trigger: TGACAACAGTAAGAACCACAAAACCAAGGACAACTT...GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR TCA 72 bp AGAGAGATTTGCAGAGGACATAACAGTAATGAGTGGTaGGATTGTGAGATTATAATCCTGCAAGTCTCTCTG +
Preference number: 3 (lower is better)
Translates to: REICRGHNSNEW*DCEIIILQVSL
Trigger: CAGAGAGACTTGCAGGATTATAATCTCACAATCTCACCACTCATTACTGTTATGTCCTCTGCAAATCTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR TCA 72 bp TTAGCTGGTCAATGTGCTTGGTTCTTCCTCAATGCATaGTACATAGACCTCAATTATTTCAATGGTCACTGC +
Preference number: 3 (lower is better)
Translates to: LAGQCAWFFLNA*YIDLNYFNGHC
Trigger: GCAGTGACCATTGAAATAATTGAGGTCTATGTATCATGCATTGAGGAAGAACCAAGCACATTGACCAGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR TCA 72 bp TCCCAAACTGGCTTTCAAAATAAAGTGGACATTCAGTaGAGTCCTATTAGCTGGTCAATGTGCTTGGTTCTT +
Preference number: 3 (lower is better)
Translates to: SQTGFQNKVDIQ*SPISWSMCLVL
Trigger: AAGAACCAAGCACATTGACCAGCTAATAGGACTTCACTGAATGTCCACTTTATTTTGAAAGCCAGTTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR GCA 72 bp TTAAGCAATTTAGTTCTGGTTCCCTGGAGAGTTGCATaGTTTGAAATACAACCCCCAGAGAAGAAATGCTAT +
Preference number: 3 (lower is better)
Translates to: LSNLVLVPWRVA*FEIQPPEKKCY
Trigger: ATAGCATTTCTTCTCTGGGGGTTGTATTTCAAAGCATGCAACTCTCCAGGGAACCAGAACTAAATTGCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 72 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTaGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAA +
Preference number: 3 (lower is better)
Translates to: DKYFEEFFLHLC*CYEVVCHQQRE
Trigger: TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CCA 72 bp ATGCTTTCACCAGAAAAACTAAATACTCAGACTCTCTaGCATCCTGTGAATCAGGGAAGAGAAAATCAAGAG +
Preference number: 3 (lower is better)
Translates to: MLSPEKLNTQTL*HPVNQGRENQE
Trigger: CTCTTGATTTTCTCTTCCCTGATTCACAGGATGCCAGAGAGTCTGAGTATTTAGTTTTTCTGGTGAAAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 72 bp TGTATAGGGATTGAATGGGAAACAGTAACTGCATATTaGGAGAACTTTTCAAGTATAGACCCCACAGCACTT +
Preference number: 3 (lower is better)
Translates to: CIGIEWETVTAY*ENFSSIDPTAL
Trigger: AAGTGCTGTGGGGTCTATACTTGAAAAGTTCTCCCAATATGCAGTTACTGTTTCCCATTCAATCCCTATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR-3UTR CAA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTTTACCCTCCAGAACATaGGCCATTACGTATATTTCC +
Preference number: 3 (lower is better)
Translates to: MNYNEGSTVITNTLICYSLPSRT*AITYIS
Trigger: GGAAATATACGTAATGGCCAATGTTCTGGAGGGTAA...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR-3UTR CAA 90 bp GGAAGATTTTTAAACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTTTACCCTCCAGAACATaGGCCATTACGTATATTTCC +
Preference number: 3 (lower is better)
Translates to: GRFLNIRFDTRHFLVHASLPSRT*AITYIS
Trigger: GGAAATATACGTAATGGCCAATGTTCTGGAGGGTAA...AGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTTTAAAAATCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
3UTR-3UTR CAA 90 bp ACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAGAAAAGAGTGCCTCGTGTTTaGAAGGCTTTTGATTTGAGG +
Preference number: 3 (lower is better)
Translates to: TCKKIILTKQNAHHEEKKRVPRV*KAFDLR
Trigger: CCTCAAATCAAAAGCCTTCAAAACACGAGGCACTCT...TTTCTTCTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATTTGTACACGCGTCTATaGCTGCAGGAATTTAAAACC +
Preference number: 3 (lower is better)
Translates to: TLLLILPKATFSVSLSRDLYTRL*LQEFKT
Trigger: GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535259.6
3UTR GCA 72 bp AATATAGGAAATCATAACATCACCATTGGCATCCAATaGATCATTATTGCCAACATACCCAGTAGGCATGTC +
Preference number: 3 (lower is better)
Translates to: NIGNHNITIGIQ*IIIANIPSRHV
Trigger: GACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR GCA 72 bp CCTATTAGCTGGTCAATGTGCTTGGTTCTTCCTCAATaGATGATACATAGACCTCAATTATTTCAATGGTCA +
Preference number: 3 (lower is better)
Translates to: PISWSMCLVLPQ*MIHRPQLFQWS
Trigger: TGACCATTGAAATAATTGAGGTCTATGTATCATGCATTGAGGAAGAACCAAGCACATTGACCAGCTAATAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CCA 72 bp ATTTTCCCTCTATGCTTCCCTGATACATTCATACCCTaGTGTATCAGAAGGGTTCTTCAAATGTCAAAAACA +
Preference number: 3 (lower is better)
Translates to: IFPLCFPDTFIP*CIRRVLQMSKT
Trigger: TGTTTTTGACATTTGAAGAACCCTTCTGATACACCAGGGTATGAATGTATCAGGGAAGCATAGAGGGAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR-3UTR CAA 90 bp ACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAGAAATTACCCTCCAGAACATaGGCCATTACGTATATTTCC +
Preference number: 3 (lower is better)
Translates to: TCKKIILTKQNAHHEEKKLPSRT*AITYIS
Trigger: GGAAATATACGTAATGGCCAATGTTCTGGAGGGTAA...TTTCTTCTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR-3UTR CAA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTACCTCACAAGATTCCTaGAGTGGAAGATTATGGCAT +
Preference number: 3 (lower is better)
Translates to: GIWNIGNHNITIGIQCIITSQDS*SGRLWH
Trigger: ATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGT...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR TCA 72 bp AACAACAACATTTTAATAGCTGGTCCTCAATCATTCTaGCTACCAAAGCTCTCCATCATTCATGCAGAAACT +
Preference number: 3 (lower is better)
Translates to: NNNILIAGPQSF*LPKLSIIHAET
Trigger: AGTTTCTGCATGAATGATGGAGAGCTTTGGTAGTCAGAATGATTGAGGACCAGCTATTAAAATGTTGTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR TCA 72 bp CTCATGTTTGCTGGAGAACAATTAACCTCATTAATTTaGAAGGCAGCTGTGGTATTGGCTATGAGTTATGTT +
Preference number: 3 (lower is better)
Translates to: LMFAGEQLTSLI*KAAVVLAMSYV
Trigger: AACATAACTCATAGCCAATACCACAGCTGCCTTTCAAATTAATGAGGTTAATTGTTCTCCAGCAAACATGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR TCA 72 bp CATTTGATCATCTCTGATCTATATCAAGTGGCAAGCTaGCCTCATCTGATACAATTAGATATGAACACAGTA +
Preference number: 3 (lower is better)
Translates to: HLIISDLYQVAS*PHLIQLDMNTV
Trigger: TACTGTGTTCATATCTAATTGTATCAGATGAGGTCAGCTTGCCACTTGATATAGATCAGAGATGATCAAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR GCA 72 bp TTTCCAGAAGCACAAAGGTTTCTCAAGTACAGTTTATaGTCTAGAAGACTCTCTTACCCAGAGTATTTTAAA +
Preference number: 3 (lower is better)
Translates to: FPEAQRFLKYSL*SRRLSYPEYFK
Trigger: TTTAAAATACTCTGGGTAAGAGAGTCTTCTAGAGCATAAACTGTACTTGAGAAACCTTTGTGCTTCTGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR TCA 72 bp AATGGGAGCAATCATATTTATATCTTAAGGTTGTTTTaGGGATCACATTCTAGGATATGCCTAGAATATCGC +
Preference number: 3 (lower is better)
Translates to: NGSNHIYILRLF*GSHSRICLEYR
Trigger: GCGATATTCTAGGCATATCCTAGAATGTGATCCTCAAAACAACCTTAAGATATAAATATGATTGCTCCCATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR GCA 72 bp TATTTTGTCTGTGTCAGGTTTACATGCACACCATATTaGTTATTCTGTATTAGAGAAACCATTAGGCATTTC +
Preference number: 3 (lower is better)
Translates to: YFVCVRFTCTPY*LFCIRETIRHF
Trigger: GAAATGCCTAATGGTTTCTCTAATACAGAATAAGCAATATGGTGTGCATGTAAACCTGACACAGACAAAATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CCAGTCCTGCTGGTAGACCTGCTCCCCGGTGGCTGGGTTACCTGTCTCCTGAAGGGTCATCTCCAGGGCTaGTGGCTGCGGCCGCGATTC +
Preference number: 4 (lower is better)
Translates to: PVLLVDLLPGGWVTCLLKGHLQG*WLRPRF
Trigger: GAATCGCGGCCGCAGCCATCAGCCCTGGAGATGACC...CTTCAGGAGACAGGTAACCCAGCCACCGGGGAGCAGGTCTACCAGCAGGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp GTGCGTGGAGTTCTGCCGGTATCGCTCGCTGGTCTCACTGTGCGGGGAACCCTTCGTAGCAGCTGGCCTTaGCCTCGGGGATGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: VRGVLPVSLAGLTVRGTLRSSWP*PRGCRR
Trigger: TCTCCTACATCCCCGAGGCCAAGGCCAGCTGCTACG...AAGGGTTCCCCGCACAGTGAGACCAGCGAGCGATACCGGCAGAACTCCACGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp CCCAGTCCTGCTGGTAGACCTGCTCCCCGGTGGCTGGGTTACCTGTCTCCTGAAAGGGGGACCTCATGGTaGAGTGGCCTGAATAGGTGG +
Preference number: 4 (lower is better)
Translates to: PSPAGRPAPRWLGYLSPERGTSW*SGLNRW
Trigger: CCACCTATTCAGGCCACTTCACCATGAGGTCCCCCT...TTCAGGAGACAGGTAACCCAGCCACCGGGGAGCAGGTCTACCAGCAGGACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp CGTTGTTGGAAAGCCCCTCTTCATTATGCAAGGGGTTCCGGTTCATTGGCAGCGTGCAGTGGGGCGCGCTaGGCGCACGAGCATCTCGGC +
Preference number: 4 (lower is better)
Translates to: RCWKAPLHYARGSGSLAACSGAR*AHEHLG
Trigger: GCCGAGATGCTCGTGCGCGCAGCGCGCCCCACTGCA...CGCTGCCAATGAACCGGAACCCCTTGCATAATGAAGAGGGGCTTTCCAACAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp GTGCGTGGAGTTCTGCCGGTATCGCTCGCTGGTCTCACTGTGCGGGGAACCCTTAATGGGTGCAAGGTGTaGATCGGGACCTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VRGVLPVSLAGLTVRGTLNGCKV*IGTSGL
Trigger: GAGGCCAGAGGTCCCGATGCACACCTTGCACCCATT...AAGGGTTCCCCGCACAGTGAGACCAGCGAGCGATACCGGCAGAACTCCACGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp TGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGACGACCGATCGCTTTGGATTCTGTaGTCACGGCCACCTCCACCG +
Preference number: 4 (lower is better)
Translates to: WPRLSLEQYDAVDLKDDRSLWIL*SRPPPP
Trigger: CGGTGGAGGTGGCCGTGAGCACAGAATCCAAAGCGA...TCGGTCGTCCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp AGAAGCCGTTCCCTGTCCTTGAGGCTTATGCTCCGGGAGGGCCTGCTAAGGTCTAGCAGTGGCCGCTCCTaGTCATCTCCAGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: RSRSLSLRLMLREGLLRSSSGRS*SSPGLM
Trigger: CATCAGCCCTGGAGATGACCAGGAGCGGCCACTGCT...AGACCTTAGCAGGCCCTCCCGGAGCATAAGCCTCAAGGACAGGGAACGGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp GGAAGTTTTCACTGGGATCCTGGTAGGGGTCCGGGAAGTCCACGTTCTCGGGCATCCCCGTTTTCAGGCTaGCCAAGGCGTCCTCTACTC +
Preference number: 4 (lower is better)
Translates to: GSFHWDPGRGPGSPRSRASPFSG*PRRPLL
Trigger: GAGTAGAGGACGCCTTGGTCAGCCTGAAAACGGGGA...TGCCCGAGAACGTGGACTTCCCGGACCCCTACCAGGATCCCAGTGAAAACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp GTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTCAACAAACTGGCCGGTATCGCTCGCTaGTCTCACTGTGCGGGGAAC +
Preference number: 4 (lower is better)
Translates to: VGVREVHVLGQGHIFNKLAGIAR*SHCAGN
Trigger: GTTCCCCGCACAGTGAGACCAGCGAGCGATACCGGC...CAGTTTGTTGAAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGACCCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp GTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTCAACAAACTGGGGTGGCTGCTCCCCGGTGGCTaGGTTACCTGTCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: VREVHVLGQGHIFNKLGWLLPGG*VTCLLK
Trigger: CTTCAGGAGACAGGTAACCCAGCCACCGGGGAGCAG...CCACCCCAGTTTGTTGAAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp GGCATTTGGCAGCCCCCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCAGGGGGACCTCATGGTaGAGTGGCCTGAATAGGTGG +
Preference number: 4 (lower is better)
Translates to: GIWQPPGFRGHQRKTESLRGTSW*SGLNRW
Trigger: CCACCTATTCAGGCCACTTCACCATGAGGTCCCCCT...GAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGGGGGCTGCCAAATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GAAGAGCGATACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGCGAGAAGGTCGAGGATaGAGTGGGGCGCGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: EERYTANWTPPWLFGNGTREGRG*SGARCA
Trigger: CGCGCAGCGCGCCCCACTGCATCCTCGACCTTCTCG...CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp CATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGGGCTCTTGGGGTCGGTaGGGTTCATCAGCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: HHCGPDCPWNSTMPLTSRGSWGR*GSSAEL
Trigger: TAGCTCTGCTGATGAACCGCACCGACCCCAAGAGCC...CCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp CCCTTCTGCCTTTCAAAAATGAAAGGAAGCTCCTCTCACCCACTGCCTCCCTCTGAGGCCGTGGATGCGTaGCCCGGACATGAGGTCGCA +
Preference number: 4 (lower is better)
Translates to: PFCLSKMKGSSSHPLPPSEAVDA*PGHEVA
Trigger: TGCGACCTCATGTCCGGGGCACGCATCCACGGCCTC...AGAGGGAGGCAGTGGGTGAGAGGAGCTTCCTTTCATTTTTGAAAGGCAGAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TTGGAAAGGCAGCTTCTGCAGTGCGTGGAGTTCTGCCGGTATCGCTCGCTGGTCTCGCTGGTCTCACTGTaGGGGGAACCCTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LERQLLQCVEFCRYRSLVSLVSL*GEPLSF
Trigger: GAAAGACAAGGGTTCCCCGCACAGTGAGACCAGCGA...GACCAGCGAGCGATACCGGCAGAACTCCACGCACTGCAGAAGCTGCCTTTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCACCCAGCCGGAGGCTCTaGAGCAGGGCTCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMAPSRRL*SRARSL
Trigger: GAGGCTGCGAGCCCTGCTGCAGAGCCTCCGGCTGGG...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396573.6
ENST00000675398.1
CDS-3UTR CCA 90 bp CATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGACCGTGGCTTGCTGCTaGATGGACGCTCCAAACTGG +
Preference number: 4 (lower is better)
Translates to: HHCGPDCPWNSTMPLTSRTVACC*MDAPNW
Trigger: CCAGTTTGGAGCGTCCATCCAGCAGCAAGCCACGGT...CCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp CCAGTCCTGCTGGTAGACCTGCTCCCCGGTGGCTGGGTTACCTGTCTCCTGAAGCGATGGAAACTCTTTTaGGATGAGCTCCGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: PVLLVDLLPGGWVTCLLKRWKLF*DELRVP
Trigger: GGGAACACGGAGCTCATCCCAAAAGAGTTTCCATCG...CTTCAGGAGACAGGTAACCCAGCCACCGGGGAGCAGGTCTACCAGCAGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp GTGCGTGGAGTTCTGCCGGTATCGCTCGCTGGTCTCACTGTGCGGGGAACCCTTAAGGACTCACCTATCTaGTGTCTGCCATGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: VRGVLPVSLAGLTVRGTLKDSPI*CLPCSA
Trigger: TGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTT...AAGGGTTCCCCGCACAGTGAGACCAGCGAGCGATACCGGCAGAACTCCACGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp GCCGTAAAAATTTCCCTCCAGAAGCCGTTCCCTGTCCTTGAGGCTTATGCTCCGAGAAATCATACCCGGTaGGGCCAAGGGAGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: AVKISLQKPFPVLEAYAPRNHTR*GQGSGP
Trigger: AGGCCCGCTCCCTTGGCCTCACCGGGTATGATTTCT...CGGAGCATAAGCCTCAAGGACAGGGAACGGCTTCTGGAGGGAAATTTTTACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp CGTTCATGTTGTCTCCAAAAATGCTCTCTTTCCCCTGAAAGGACCTGTTGTCTGAACTGCCCGGTCCTCTaGGCGCGCCGGAGCACCCTC +
Preference number: 4 (lower is better)
Translates to: RSCCLQKCSLSPERTCCLNCPVL*ARRSTL
Trigger: GAGGGTGCTCCGGCGCGCTCAGAGGACCGGGCAGTT...CAGACAACAGGTCCTTTCAGGGGAAAGAGAGCATTTTTGGAGACAACATGAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGCCCAGCCGGAGGCTCTaGAGCAGGGCTCTAACGGGG +
Preference number: 4 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVPSRRL*SRALTG
Trigger: CCCCGTTAGAGCCCTGCTGCAGAGCCTCCGGCTGGG...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS-3UTR GCA 90 bp TATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGGAGGCCGTGGATGCGTaGCCCGGACATGAGGTCGCA +
Preference number: 4 (lower is better)
Translates to: YLVSAMLSTHLTRFLEWKEAVDA*PGHEVA
Trigger: TGCGACCTCATGTCCGGGGCACGCATCCACGGCCTC...CTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAACTGGGCCACACGGCGTaGCTCAGGCTCAGCGTATGG +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQLGHTA*LRLSVW
Trigger: CCATACGCTGAGCCTGAGGCACGCCGTGTGGCCCAG...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GGCATTTGGCAGCCCCCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCGGTGAGCGAGCCAACTaGCATGACTGCCCGTTGATA +
Preference number: 4 (lower is better)
Translates to: GIWQPPGFRGHQRKTESLGERAN*HDCPLI
Trigger: TATCAACGGGCAGTCATGGCAGTTGGCTCGCTCACC...GAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGGGGGCTGCCAAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTCAACAAACTGGGGTGGGCGTGGAGTCCCCCTTaGGGAAGTTTTCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: VREVHVLGQGHIFNKLGWAWSPP*GSFHWD
Trigger: ATCCCAGTGAAAACTTCCGCAAGGGGGACTCCACGC...CCACCCCAGTTTGTTGAAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp CATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGTGGAAAGGCAGCTTCTaGAGTGCGTGGAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: HHCGPDCPWNSTMPLTSRWKGSF*SAWSSA
Trigger: GGCAGAACTCCACGCACTGCAGAAGCTGCCTTTCCA...CCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTAGGTCGAGGATGCAGTaGGGCGCGCTGCGCGCACGA +
Preference number: 4 (lower is better)
Translates to: NASLLPTYPVGMSRRLALRSRMQ*GALRAR
Trigger: TCGTGCGCGCAGCGCGCCCCACTGCATCCTCGACCT...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000675398.1
CDS-3UTR CCA 90 bp CATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGCATGAATGCCCAAGATaGGGACGAAGGTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: HHCGPDCPWNSTMPLTSRHECPR*GRRCGR
Trigger: CCTCCCACACCTTCGTCCCCATCTTGGGCATTCATG...CCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGGAAAGGCAGCTTCTGCAGTGCGTGGAGTTCTGCCGGTATCGCTCGCTGGTCTGGCTTGCTGCTGGATaGACGCTCCAAACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LERQLLQCVEFCRYRSLVWLAAG*TLQTGR
Trigger: TCTTCCAGTTTGGAGCGTCCATCCAGCAGCAAGCCA...GACCAGCGAGCGATACCGGCAGAACTCCACGCACTGCAGAAGCTGCCTTTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp CCCTTCTGCCTTTCAAAAATGAAAGGAAGCTCCTCTCACCCACTGCCTCCCTCTTCTGCCCGTAGCAGCTaGCCTTGGCCTCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: PFCLSKMKGSSSHPLPPSSARSS*PWPRGC
Trigger: ACATCCCCGAGGCCAAGGCCAGCTGCTACGGGCAGA...AGAGGGAGGCAGTGGGTGAGAGGAGCTTCCTTTCATTTTTGAAAGGCAGAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTAGGGAGTGGGTCCTATTCTCTGCTGTTGCCTCATCCCTCTGGGAGACTGGATGGCCCCGACTGTCCCTaGAACAGTACGATGCCGTTG +
Preference number: 4 (lower is better)
Translates to: LGSGSYSLLLPHPSGRLDGPDCP*NSTMPL
Trigger: CAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCC...ATCCAGTCTCCCAGAGGGATGAGGCAACAGCAGAGAATAGGACCCACTCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CAA 72 bp TCGGAGGTGTGGTCTGGCAAGAGAGACTTGCTCCTCTaGCTGTCCTCCAGACCTTGGGGGAAAAGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SEVWSGKRDLLL*LSSRPWGKREL
Trigger: AAGCTCCCTTTTCCCCCAAGGTCTGGAGGACAGCAAGAGGAGCAAGTCTCTCTTGCCAGACCACACCTCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTGAAGCTGAAGCCCGATaGCCACGACGCCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: NASLLPTYPVGMSRRLALEAEAR*PRRPQC
Trigger: GCACTGGGGGCGTCGTGGGCATCGGGCTTCAGCTTC...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS-3UTR GCA 90 bp CGTTGTTGGAAAGCCCCTCTTCATTATGCAAGGGGTTCCGGTTCATTGGCAGCGATGAGGTCGCACACGTaGGTGATGAGGCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RCWKAPLHYARGSGSLAAMRSHT*VMRLLG
Trigger: CCCCAAGAGCCTCATCACGCACGTGTGCGACCTCAT...CGCTGCCAATGAACCGGAACCCCTTGCATAATGAAGAGGGGCTTTCCAACAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp CTCTTTAGGGAGTGGGTCCTATTCTCTGCTGTTGCCTCATCCCTCTGGGAGACTAGCATGACCGTGGCTTaGTGCTGGATGGACGCTCCA +
Preference number: 4 (lower is better)
Translates to: LFREWVLFSAVASSLWETSMTVA*CWMDAP
Trigger: TGGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCT...AGTCTCCCAGAGGGATGAGGCAACAGCAGAGAATAGGACCCACTCCCTAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp GGAAGATACCTAGGGCTCTTTAGGGAGTGGGTCCTATTCTCTGCTGTTGCCTCACAGTGCGTGGAGTTCTaGCGGTATCGCTCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GRYLGLFREWVLFSAVASQCVEF*RYRSLV
Trigger: GACCAGCGAGCGATACCGGCAGAACTCCACGCACTG...TGAGGCAACAGCAGAGAATAGGACCCACTCCCTAAAGAGCCCTAGGTATCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACCCCAGCCGGAGGCTCTaGAGCAGGGCTCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNPSRRL*SRARSL
Trigger: GAGGCTGCGAGCCCTGCTGCAGAGCCTCCGGCTGGG...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396573.6
CDS-3UTR CCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGTGGGCTACGGCCTCCTaGTCCGTGTCGTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGEWATAS*SVSSPN
Trigger: GTTTGGGGACGACACGGACCAGGAGGCCGTAGCCCA...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGGAAAGGCAGCTTCTGCAGTGCGTGGAGTTCTGCCGGTATCGCTCGCTGGTCATGGGGACGAAGGTGTaGGAGGAGATAAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: LERQLLQCVEFCRYRSLVMGTKV*EEIKSS
Trigger: GCTGGATTTTATCTCCTCCCACACCTTCGTCCCCAT...GACCAGCGAGCGATACCGGCAGAACTCCACGCACTGCAGAAGCTGCCTTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAATCTGCCCGTAGCAGCTaGCCTTGGCCTCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQSARSS*PWPRGC
Trigger: ACATCCCCGAGGCCAAGGCCAGCTGCTACGGGCAGA...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGGTGACGATGCTGAGATaGTTGTCATCCGGCTCACAG +
Preference number: 4 (lower is better)
Translates to: HHCGPDCPWNSTMPLTSRVTMLR*LSSGSQ
Trigger: CTGTGAGCCGGATGACAACCATCTCAGCATCGTCAC...CCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp TGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGACGACCGACAATTCCATAACCGGTaGTGGCAAAGATGTACCCAC +
Preference number: 4 (lower is better)
Translates to: WPRLSLEQYDAVDLKDDRQFHNR*WQRCTH
Trigger: GTGGGTACATCTTTGCCACCACCGGTTATGGAATTG...TCGGTCGTCCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp CATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGAGTGGCCTGAATAGGTaGGCATGTTGGAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: HHCGPDCPWNSTMPLTSRSGLNR*ACWKGS
Trigger: GCTGCCTTTCCAACATGCCCACCTATTCAGGCCACT...CCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
3UTR CAA 72 bp GATTTCTTCCACAGCTGCCGGGGTCTAGAGTTCGCTTaGGATTCTGTGCTCACGGCCACCTCCACCGTGTTA +
Preference number: 4 (lower is better)
Translates to: DFFHSCRGLEFA*DSVLTATSTVL
Trigger: TAACACGGTGGAGGTGGCCGTGAGCACAGAATCCAAAGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CAA 72 bp TGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTaGACCTCAAGGACGACCGAAGATAGCTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: CGPDCPWNSTMP*TSRTTEDSCHS
Trigger: TGAATGACAGCTATCTTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp CGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGAGCGACCGGGAGCTGCTaGGCGAGGGAGGTAGGGAGA +
Preference number: 4 (lower is better)
Translates to: RRHKCVSLCSSEQDHRSRATGSC*AREVGR
Trigger: TCTCCCTACCTCCCTCGCTCAGCAGCTCCCGGTCGC...TCGGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS-3UTR TCA 90 bp CGTTGTTGGAAAGCCCCTCTTCATTATGCAAGGGGTTCCGGTTCATTGGCAGCGGGGCCTCACTCAGAATaGGAACAGCCTCGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RCWKAPLHYARGSGSLAAGPHSE*EQPRLW
Trigger: CCAAAGACGAGGCTGTTCTCATTCTGAGTGAGGCCC...CGCTGCCAATGAACCGGAACCCCTTGCATAATGAAGAGGGGCTTTCCAACAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp AGAAGCCGTTCCCTGTCCTTGAGGCTTATGCTCCGGGAGGGCCTGCTAAGGTCTCGTAGGAGACAGAAATaGGTCCCGATGGAAACTCTT +
Preference number: 4 (lower is better)
Translates to: RSRSLSLRLMLREGLLRSRRRQK*VPMETL
Trigger: AAGAGTTTCCATCGGGACTCATTTCTGTCTCCTACG...AGACCTTAGCAGGCCCTCCCGGAGCATAAGCCTCAAGGACAGGGAACGGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp GGAAGTTTTCACTGGGATCCTGGTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAGGTAGCCTTCCTCAGTaGAGGATAAGTCTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: GSFHWDPGRGPGSPRSRAGSLPQ*RISLCH
Trigger: ATGGCAAAGACTTATCCTTCACTGAGGAAGGCTACC...TGCCCGAGAACGTGGACTTCCCGGACCCCTACCAGGATCCCAGTGAAAACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCACGGAGCACACGCCCGTaGAACAGAAGCGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMARSTRP*NRSAAS
Trigger: GGAAGCTGCGCTTCTGTTTCACGGGCGTGTGCTCCG...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
CDS-3UTR TCA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCAGCCGTTCCCTGTCCTTaGGGCTTATGCTCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMAAVPCP*GLCSGR
Trigger: CCTCCCGGAGCATAAGCCTCAAGGACAGGGAACGGC...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATGGTCATCTCCAGGGCTaGTGGCTGCGGCCGCGATTC +
Preference number: 4 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHGHLQG*WLRPRF
Trigger: GAATCGCGGCCGCAGCCATCAGCCCTGGAGATGACC...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396573.6
CDS-3UTR GCA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATGCAGTGGGGCGCGCTaGGCGCACGAGCATCTCGGC +
Preference number: 4 (lower is better)
Translates to: FFLHLCWCYEVVCHQQRECSGAR*AHEHLG
Trigger: GCCGAGATGCTCGTGCGCGCAGCGCGCCCCACTGCA...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GGCATTTGGCAGCCCCCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTGACCATAAATGGGTaGAAGGTGTGCATCGGGACC +
Preference number: 4 (lower is better)
Translates to: GIWQPPGFRGHQRKTESLLTING*KVCIGT
Trigger: GGTCCCGATGCACACCTTGCACCCATTTATGGTCAA...GAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGGGGGCTGCCAAATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACACAGTGCGTGGAGTTCTaGCGGTATCGCTCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTQCVEF*RYRSLV
Trigger: GACCAGCGAGCGATACCGGCAGAACTCCACGCACTG...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTCAGTGCGTGGAGTTCTaGCGGTATCGCTCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GIQCIIIANIPSRHVPETQCVEF*RYRSLV
Trigger: GACCAGCGAGCGATACCGGCAGAACTCCACGCACTG...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTCAACAAACTGCACCTATCTGGTGTCTaGCATGCTCAGCACACACCT +
Preference number: 4 (lower is better)
Translates to: VGVREVHVLGQGHIFNKLHLSGV*HAQHTP
Trigger: AGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTG...CAGTTTGTTGAAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGACCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTGACGACAGCTCCTCTCACCCACTaGCTCCCTCTGTCTCCCTAT +
Preference number: 4 (lower is better)
Translates to: PGFRGHQRKTESLFGLTTAPLTH*LPLSPY
Trigger: ATAGGGAGACAGAGGGAGGCAGTGGGTGAGAGGAGC...TGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGCCAAACACGAGGCCGTaGATGCGTGCCCCGGACATG +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITPNTRP*MRAPDM
Trigger: CATGTCCGGGGCACGCATCCACGGCCTCGTGTTTGG...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp TATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGCGTAGCAGCTGGCCTTaGCCTCGGGGATGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: YLVSAMLSTHLTRFLEWKRSSWP*PRGCRR
Trigger: TCTCCTACATCCCCGAGGCCAAGGCCAGCTGCTACG...CTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ATACGGCTGTTGGTGCATGTCACCACATTAACAACTCTGGGAAGAGCGATACACTCTGCCCGTAGCAGCTaGCCTTGGCCTCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: IRLLVHVTTLTTLGRAIHSARSS*PWPRGC
Trigger: ACATCCCCGAGGCCAAGGCCAGCTGCTACGGGCAGA...GTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACATGCACCAACAGCCGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GGAAGATACCTAGGGCTCTTTAGGGAGTGGGTCCTATTCTCTGCTGTTGCCTCAAGAAGGACTTGTACCTaGGCCACACGGCGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: GRYLGLFREWVLFSAVASRRTCT*ATRRAS
Trigger: TGAGGCACGCCGTGTGGCCCAGGTACAAGTCCTTCT...TGAGGCAACAGCAGAGAATAGGACCCACTCCCTAAAGAGCCCTAGGTATCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp CATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGGTAAAAGAAGGCCCATaGGGTGCTTTCCCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: HHCGPDCPWNSTMPLTSRVKEGP*GAFPLA
Trigger: AGCCAAAGGGAAAGCACCCCATGGGCCTTCTTTTAC...CCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGGCCGGTATCGCTCGCTaGTCTCACTGTGCGGGGAAC +
Preference number: 4 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQAGIAR*SHCAGN
Trigger: GTTCCCCGCACAGTGAGACCAGCGAGCGATACCGGC...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTCTGCTCCCCGGTGGCTaGGTTACCTGTCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GIQCIIIANIPSRHVPETLLPGG*VTCLLK
Trigger: CTTCAGGAGACAGGTAACCCAGCCACCGGGGAGCAG...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTGGCCCCGACTGTCCCTaGAACAGTACGATGCCGTTG +
Preference number: 4 (lower is better)
Translates to: GIQCIIIANIPSRHVPETGPDCP*NSTMPL
Trigger: CAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCC...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGGCCCCGACTGTCCCTaGAACAGTACGATGCCGTTG +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQGPDCP*NSTMPL
Trigger: CAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCC...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR CAA 72 bp GATTCTGTGCTCACGGCCACCTCCACCGTGTTAGGGTaGGACTCATTGAGAGTAAGAGGATGTTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: DSVLTATSTVLG*DSLRVRGCCPW
Trigger: CCAGGGACAACATCCTCTTACTCTCAATGAGTCCAACCCTAACACGGTGGAGGTGGCCGTGAGCACAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CAA 72 bp AAAGGGTTATCGGAGGTGTGGTCTGGCAAGAGAGACTaGCTCCTCTTGCTGTCCTCCAGACCTTGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: KGLSEVWSGKRD*LLLLSSRPWGK
Trigger: TTTCCCCCAAGGTCTGGAGGACAGCAAGAGGAGCAAGTCTCTCTTGCCAGACCACACCTCCGATAACCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTGACGACAGGGCCTCACTCAGAATaGGAACAGCCTCGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: PGFRGHQRKTESLFGLTTGPHSE*EQPRLW
Trigger: CCAAAGACGAGGCTGTTCTCATTCTGAGTGAGGCCC...TGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGGGCCTCACTCAGAATaGGAACAGCCTCGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SEIYTSLWPRLSLEQYDAGPHSE*EQPRLW
Trigger: CCAAAGACGAGGCTGTTCTCATTCTGAGTGAGGCCC...GGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR TCA 90 bp GGCATTTGGCAGCCCCCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCCGTAGGAGACAGAAATaGGTCCCGATGGAAACTCTT +
Preference number: 4 (lower is better)
Translates to: GIWQPPGFRGHQRKTESLRRRQK*VPMETL
Trigger: AAGAGTTTCCATCGGGACTCATTTCTGTCTCCTACG...GAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGGGGGCTGCCAAATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CTCTTTAGGGAGTGGGTCCTATTCTCTGCTGTTGCCTCATCCCTCTGGGAGACTCCCAGACAGAGGCGCTaGATGGTTCTAGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: LFREWVLFSAVASSLWETPRQRR*MVLEKQ
Trigger: CTGCTTTTCTAGAACCATTCAGCGCCTCTGTCTGGG...AGTCTCCCAGAGGGATGAGGCAACAGCAGAGAATAGGACCCACTCCCTAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp CGTTGTTGGAAAGCCCCTCTTCATTATGCAAGGGGTTCCGGTTCATTGGCAGCGCAGGCACGGAGTTATTaGACACCAGGCCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: RCWKAPLHYARGSGSLAAQARSY*TPGPKE
Trigger: TTCTTTGGGGCCTGGTGTTCAATAACTCCGTGCCTG...CGCTGCCAATGAACCGGAACCCCTTGCATAATGAAGAGGGGCTTTCCAACAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTCGGAGCACACGCCCGTaGAACAGAAGCGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSRSTRP*NRSAAS
Trigger: GGAAGCTGCGCTTCTGTTTCACGGGCGTGTGCTCCG...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CACAGTTTGGAGGATACTCAGGGTAGATCCAAGAGTGCCTCGTGTTTTGAAGGCAGGGGGACCTCATGGTaGAGTGGCCTGAATAGGTGG +
Preference number: 4 (lower is better)
Translates to: HSLEDTQGRSKSASCFEGRGTSW*SGLNRW
Trigger: CCACCTATTCAGGCCACTTCACCATGAGGTCCCCCT...GCCTTCAAAACACGAGGCACTCTTGGATCTACCCTGAGTATCCTCCAAACTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTGCCGTTCCCTGTCCTTaGGGCTTATGCTCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPAVPCP*GLCSGR
Trigger: CCTCCCGGAGCATAAGCCTCAAGGACAGGGAACGGC...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR TCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACACTACATATCAGCCTCTaGCCACCTCTGGCACTCGGC +
Preference number: 4 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTLHISL*PPLALG
Trigger: GCCGAGTGCCAGAGGTGGTCAGAGGCTGATATGTAG...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535259.6
CDS-3UTR GCA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCACTCCCCAGCGCCGGCTaGTGGGAGTTGTGCGACCGG +
Preference number: 4 (lower is better)
Translates to: RANNNNNKIPPYIFFLLALPSAG*WELCDR
Trigger: CCGGTCGCACAACTCCCAGCAGCCGGCGCTGGGGAG...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS-3UTR GCA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTATGAGGTCGCACACGTaGGTGATGAGGCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GIQCIIIANIPSRHVPETMRSHT*VMRLLG
Trigger: CCCCAAGAGCCTCATCACGCACGTGTGCGACCTCAT...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000675398.1
CDS-3UTR GCA 90 bp CCCTTCTGCCTTTCAAAAATGAAAGGAAGCTCCTCTCACCCACTGCCTCCCTCTTGGTTAGGATGCCAATaGCGTCCCTCACTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: PFCLSKMKGSSSHPLPPSWLGCQ*RPSLSP
Trigger: AGGCGAGAGTGAGGGACGGCATTGGCATCCTAACCA...AGAGGGAGGCAGTGGGTGAGAGGAGCTTCCTTTCATTTTTGAAAGGCAGAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGAATGGGTGCAAGGTGTaGATCGGGACCTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGENGCKV*IGTSGL
Trigger: GAGGCCAGAGGTCCCGATGCACACCTTGCACCCATT...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGAATGGGTGCAAGGTGTaGATCGGGACCTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: YLVSAMLSTHLTRFLEWKNGCKV*IGTSGL
Trigger: GAGGCCAGAGGTCCCGATGCACACCTTGCACCCATT...CTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTCAACAAACTGTTGACCATAAATGGGTaGAAGGTGTGCATCGGGACC +
Preference number: 4 (lower is better)
Translates to: VGVREVHVLGQGHIFNKLLTING*KVCIGT
Trigger: GGTCCCGATGCACACCTTGCACCCATTTATGGTCAA...CAGTTTGTTGAAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGACCCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCCTAGCTCCGCTTCCTaGCCCACTCCGGACGGCAAC +
Preference number: 4 (lower is better)
Translates to: QQNTSLHLLPLSRALLDIPSSAS*PTPDGN
Trigger: GTTGCCGTCCGGAGTGGGGCAGGAAGCGGAGCTAGG...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTCCAAACACGAGGCCGTaGATGCGTGCCCCGGACATG +
Preference number: 4 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPPNTRP*MRAPDM
Trigger: CATGTCCGGGGCACGCATCCACGGCCTCGTGTTTGG...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGGTGCATCGGGACCTCTaGCCTCTCCATCTGCCCGTA +
Preference number: 4 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGVHRDL*PLHLPV
Trigger: TACGGGCAGATGGAGAGGCCAGAGGTCCCGATGCAC...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGGTGCATCGGGACCTCTaGCCTCTCCATCTGCCCGTA +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITVHRDL*PLHLPV
Trigger: TACGGGCAGATGGAGAGGCCAGAGGTCCCGATGCAC...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGCTCAGGCTCAGCGTATaGTTCTCCCACTTGCCCACC +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGELRLSV*FSHLPT
Trigger: GGTGGGCAAGTGGGAGAACCATACGCTGAGCCTGAG...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACAAGAAGGACTTGTACCTaGGCCACACGGCGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTRRTCT*ATRRAS
Trigger: TGAGGCACGCCGTGTGGCCCAGGTACAAGTCCTTCT...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CTCTTTAGGGAGTGGGTCCTATTCTCTGCTGTTGCCTCATCCCTCTGGGAGACTGTGACGATGCTGAGATaGTTGTCATCCGGCTCACAG +
Preference number: 4 (lower is better)
Translates to: LFREWVLFSAVASSLWETVTMLR*LSSGSQ
Trigger: CTGTGAGCCGGATGACAACCATCTCAGCATCGTCAC...AGTCTCCCAGAGGGATGAGGCAACAGCAGAGAATAGGACCCACTCCCTAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp GGCCTGAATAGGTGGGCATGTTGGAAAGGCAGCTTCTGCAGTGCGTGGAGTTCTTGGGGTGGATCTAAGTaGAAACCAGGCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GLNRWACWKGSFCSAWSSWGGSK*KPGSFS
Trigger: TGAGAAGGAGCCTGGTTTCCACTTAGATCCACCCCA...AGAACTCCACGCACTGCAGAAGCTGCCTTTCCAACATGCCCACCTATTCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGGGGGTTCCGGTTCATTaGCAGCGTGGAGTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQGVPVH*QRGVPL
Trigger: AAGGGGGACTCCACGCTGCCAATGAACCGGAACCCC...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTGCCGGTATCGCTCGCTaGTCTCACTGTGCGGGGAAC +
Preference number: 4 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPAGIAR*SHCAGN
Trigger: GTTCCCCGCACAGTGAGACCAGCGAGCGATACCGGC...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGAATAGGTGGGCATGTTaGAAAGGCAGCTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: HHCGPDCPWNSTMPLTSRNRWAC*KGSFCS
Trigger: ACTGCAGAAGCTGCCTTTCCAACATGCCCACCTATT...CCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp GGCCTGAATAGGTGGGCATGTTGGAAAGGCAGCTTCTGCAGTGCGTGGAGTTCTCTGTCCTCCAGACCTTaGGGGAAAAGGGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: GLNRWACWKGSFCSAWSSLSSRP*GKRELF
Trigger: AAAAAGCTCCCTTTTCCCCCAAGGTCTGGAGGACAG...AGAACTCCACGCACTGCAGAAGCTGCCTTTCCAACATGCCCACCTATTCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp GGACGACCGAAGATAGCTGTCATTCACCGCCTGGGATGGCAACGAGTGTTTGTACGTTGGTCATCCCTGTaGGAGTGGAGGAAAGGGTTA +
Preference number: 4 (lower is better)
Translates to: GRPKIAVIHRLGWQRVFVRWSSL*EWRKGL
Trigger: TAACCCTTTCCTCCACTCCCACAGGGATGACCAACG...TACAAACACTCGTTGCCATCCCAGGCGGTGAATGACAGCTATCTTCGGTCGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGGTCCCTCGGGCCTTTaGCTCCAGATGTGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQGPSGL*LQMCLG
Trigger: TCCAAGACACATCTGGAGCCAAAGGCCCGAGGGACC...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACATCCATGGCTGGGTCTTaGGGCAGCAGAGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTSMAGS*GSRGTA
Trigger: TGCTGTACCTCTGCTGCCCCAAGACCCAGCCATGGA...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTGCATGTGCGTGCTATTACCCATGGACAGAGACCCAACCGTTTGCATTCAAGTAGGCTTCTCCATGGCTaGGTCTTGGGGCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LHVRAITHGQRPNRLHSSRLLHG*VLGQQR
Trigger: CCTCTGCTGCCCCAAGACCCAGCCATGGAGAAGCCT...ACTTGAATGCAAACGGTTGGGTCTCTGTCCATGGGTAATAGCACGCACATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGATAGATGCGCCCCCATaGATGCCCAAGATGGGGACG +
Preference number: 4 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGIDAPP*MPKMGT
Trigger: CGTCCCCATCTTGGGCATTCATGGGGGCGCATCTAT...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGGGGCCTCACTCAGAATaGGAACAGCCTCGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGEGPHSE*EQPRLW
Trigger: CCAAAGACGAGGCTGTTCTCATTCTGAGTGAGGCCC...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp GATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCAAGAAATCATACCCGGTaGGGCCAAGGGAGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: DVKEDKPKTMLAFGRQMARNHTR*GQGSGP
Trigger: AGGCCCGCTCCCTTGGCCTCACCGGGTATGATTTCT...TGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTGCGAGCCAACTGCCATaGCTGCCCGTTGATAGACCA +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIASQLP*LPVDRP
Trigger: TGGTCTATCAACGGGCAGTCATGGCAGTTGGCTCGC...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGATCCCCGTTTTCAGGCTaGCCAAGGCGTCCTCTACTC +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRSPFSG*PRRPLL
Trigger: GAGTAGAGGACGCCTTGGTCAGCCTGAAAACGGGGA...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTTCCCCGTTTTCAGGCTaGCCAAGGCGTCCTCTACTC +
Preference number: 4 (lower is better)
Translates to: NASLLPTYPVGMSRRLALSPFSG*PRRPLL
Trigger: GAGTAGAGGACGCCTTGGTCAGCCTGAAAACGGGGA...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTCCCCGTTTTCAGGCTaGCCAAGGCGTCCTCTACTC +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITSPFSG*PRRPLL
Trigger: GAGTAGAGGACGCCTTGGTCAGCCTGAAAACGGGGA...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATCGGAGCACACGCCCGTaGAACAGAAGCGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHRSTRP*NRSAAS
Trigger: GGAAGCTGCGCTTCTGTTTCACGGGCGTGTGCTCCG...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
CDS-3UTR TCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTAGGGGGACCTCATGGTaGAGTGGCCTGAATAGGTGG +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIRGTSW*SGLNRW
Trigger: CCACCTATTCAGGCCACTTCACCATGAGGTCCCCCT...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TATGGAATCCACGGATTTCTTCCACAGCTGCCGGGGTCTAGAGTTCGCTTTGGAGGGTTACCTGTCTCCTaGAGCATCTGGTCTTCATCG +
Preference number: 4 (lower is better)
Translates to: YGIHGFLPQLPGSRVRFGGLPVS*SIWSSS
Trigger: CGATGAAGACCAGATGCTTCAGGAGACAGGTAACCC...TCCAAAGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATCCGTGGATTCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTGCCGTTCCCTGTCCTTaGGGCTTATGCTCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLAVPCP*GLCSGR
Trigger: CCTCCCGGAGCATAAGCCTCAAGGACAGGGAACGGC...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCACCCCGAGAGTTTGCTTaGGGGGACACTAAACAGGCT +
Preference number: 4 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLAPREFA*GDTKQA
Trigger: AGCCTGTTTAGTGTCCCCTCAAGCAAACTCTCGGGG...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAACAGTACGATGCCGTTaGCCTCAAGGACGACCGAAG +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQTVRCR*PQGRPK
Trigger: CTTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGT...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACAACAGTACGATGCCGTTaGCCTCAAGGACGACCGAAG +
Preference number: 4 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTTVRCR*PQGRPK
Trigger: CTTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGT...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGCCTCACAAGATTCCTTaGGTGGAAGATTATGGCATG +
Preference number: 4 (lower is better)
Translates to: HHCGPDCPWNSTMPLTSRPHKIP*VEDYGM
Trigger: CATGCCATAATCTTCCACTCAAGGAATCTTGTGAGG...CCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR TCA 90 bp GTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTCAACAAACTGGGGTGGCCTCACAAGATTCCTTaGGTGGAAGATTATGGCATG +
Preference number: 4 (lower is better)
Translates to: VREVHVLGQGHIFNKLGWPHKIP*VEDYGM
Trigger: CATGCCATAATCTTCCACTCAAGGAATCTTGTGAGG...CCACCCCAGTTTGTTGAAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGGGCTGGGAGGAGGCATaGTTTGGCAAGGACTGGAGA +
Preference number: 4 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVGWEEA*FGKDWR
Trigger: TCTCCAGTCCTTGCCAAATCATGCCTCCTCCCAGCC...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCGAGAAGGTCGAGGATaGAGTGGGGCGCGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYREGRG*SGARCA
Trigger: CGCGCAGCGCGCCCCACTGCATCCTCGACCTTCTCG...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000675398.1
CDS-3UTR GCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGAGGCTCTTGGGGTCGGTaGGGTTCATCAGCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRGSWGR*GSSAEL
Trigger: TAGCTCTGCTGATGAACCGCACCGACCCCAAGAGCC...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000675398.1
CDS-3UTR GCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTATGAGGTCGCACACGTaGGTGATGAGGCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIMRSHT*VMRLLG
Trigger: CCCCAAGAGCCTCATCACGCACGTGTGCGACCTCAT...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGATGAGGTCGCACACGTaGGTGATGAGGCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQMRSHT*VMRLLG
Trigger: CCCCAAGAGCCTCATCACGCACGTGTGCGACCTCAT...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp TTGCATGTGCGTGCTATTACCCATGGACAGAGACCCAACCGTTTGCATTCAAGTAGCATGACCGTGGCTTaGTGCTGGATGGACGCTCCA +
Preference number: 4 (lower is better)
Translates to: LHVRAITHGQRPNRLHSSSMTVA*CWMDAP
Trigger: TGGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCT...ACTTGAATGCAAACGGTTGGGTCTCTGTCCATGGGTAATAGCACGCACATGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGCAGCGGTGGTTAGGATaGCAATGCCGTCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITQRWLG*QCRPSL
Trigger: GAGTGAGGGACGGCATTGGCATCCTAACCACCGCTG...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTCTGGGCCACACGGCGTaGCTCAGGCTCAGCGTATGG +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSLGHTA*LRLSVW
Trigger: CCATACGCTGAGCCTGAGGCACGCCGTGTGGCCCAG...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTGACGACAGCCAACTGCCATGACTaGCCGTTGATAGACCACTTC +
Preference number: 4 (lower is better)
Translates to: PGFRGHQRKTESLFGLTTANCHD*PLIDHF
Trigger: GAAGTGGTCTATCAACGGGCAGTCATGGCAGTTGGC...TGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp ATGGAATCCACGGATTTCTTCCACAGCTGCCGGGGTCTAGAGTTCGCTTTGGATGCCAACTGCCATGACTaGCCGTTGATAGACCACTTC +
Preference number: 4 (lower is better)
Translates to: MESTDFFHSCRGLEFALDANCHD*PLIDHF
Trigger: GAAGTGGTCTATCAACGGGCAGTCATGGCAGTTGGC...ATCCAAAGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATCCGTGGATTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp GCATCTGGTCTTCATCGATGTCATAGAGGTTCCCCATCCGCAGGCAGGCATCGCCAGAAGGTGAGACGGTaGCATTACTTCTTGAAACCA +
Preference number: 4 (lower is better)
Translates to: ASGLHRCHRGSPSAGRHRQKVRR*HYFLKP
Trigger: TGGTTTCAAGAAGTAATGGCACCGTCTCACCTTCTG...GCGATGCCTGCCTGCGGATGGGGAACCTCTATGACATCGATGAAGACCAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp CATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGGGAGTTTTAACATGTTaGTCTGGGATCCCGTCAGAT +
Preference number: 4 (lower is better)
Translates to: HHCGPDCPWNSTMPLTSRGVLTC*SGIPSD
Trigger: ATCTGACGGGATCCCAGAGCAACATGTTAAAACTCC...CCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp TCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTGGGTCCTATTCTCTaGTGTTGCCTCATCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SEIYTSLWPRLSLEQYDAVGPIL*CCLIPL
Trigger: CAGAGGGATGAGGCAACAGCAGAGAATAGGACCCAC...GGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAATCGCTGGTCTCACTGTaGGGGGAACCCTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQSLVSL*GEPLSF
Trigger: GAAAGACAAGGGTTCCCCGCACAGTGAGACCAGCGA...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGGAAAGGCAGCTTCTaGAGTGCGTGGAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GIQCIIIANIPSRHVPETWKGSF*SAWSSA
Trigger: GGCAGAACTCCACGCACTGCAGAAGCTGCCTTTCCA...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GCAAACAATGACAACAGCAAAACTCTGATCCCACTTTGGGAGACAACAAGCCCTTACGGGTGCAAGGTGTaGATCGGGACCTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ANNDNSKTLIPLWETTSPYGCKV*IGTSGL
Trigger: GAGGCCAGAGGTCCCGATGCACACCTTGCACCCGTA...AGGGCTTGTTGTCTCCCAAAGTGGGATCAGAGTTTTGCTGTTGTCATTGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR CCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTAGGTCGAGGATGCAGTaGGGCGCGCTGCGCGCACGA +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYIRSRMQ*GALRAR
Trigger: TCGTGCGCGCAGCGCGCCCCACTGCATCCTCGACCT...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000675398.1
CDS-3UTR CCA 90 bp ACAGATGGCATTGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCACCAAACACGAGGCCGTaGATGCGTGCCCCGGACATG +
Preference number: 4 (lower is better)
Translates to: TDGIVLLTDHSTHTAVGAPNTRP*MRAPDM
Trigger: CATGTCCGGGGCACGCATCCACGGCCTCGTGTTTGG...TGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACAATGCCATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCTGGGCTACGGCCTCCTaGTCCGTGTCGTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: QQNTSLHLLPLSRALLDIWATAS*SVSSPN
Trigger: GTTTGGGGACGACACGGACCAGGAGGCCGTAGCCCA...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp GCAAACAATGACAACAGCAAAACTCTGATCCCACTTTGGGAGACAACAAGCCCTCGTAGCAGCTGGCCTTaGCCTCGGGGATGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: ANNDNSKTLIPLWETTSPRSSWP*PRGCRR
Trigger: TCTCCTACATCCCCGAGGCCAAGGCCAGCTGCTACG...AGGGCTTGTTGTCTCCCAAAGTGGGATCAGAGTTTTGCTGTTGTCATTGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR CCA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATTCTGCCCGTAGCAGCTaGCCTTGGCCTCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: RALLDIQHLPSRTLAITYSARSS*PWPRGC
Trigger: ACATCCCCGAGGCCAAGGCCAGCTGCTACGGGCAGA...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATATCTGCCCGTAGCAGCTaGCCTTGGCCTCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: LYTRLLLQEFKTLGVEYISARSS*PWPRGC
Trigger: ACATCCCCGAGGCCAAGGCCAGCTGCTACGGGCAGA...TATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCGTGCATCGGGACCTCTaGCCTCTCCATCTGCCCGTA +
Preference number: 4 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTVHRDL*PLHLPV
Trigger: TACGGGCAGATGGAGAGGCCAGAGGTCCCGATGCAC...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACAATCACCACCAGCCTaGGGTGCACCTGGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRQSPPA*GAPGSL
Trigger: AAGGCTACCAGGTGCACCCCAGGCTGGTGGTGATTG...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTCAGGCTCAGCGTATaGTTCTCCCACTTGCCCACC +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRLRLSV*FSHLPT
Trigger: GGTGGGCAAGTGGGAGAACCATACGCTGAGCCTGAG...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GAAGAGCGATACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGTGCGGAAGTTTTCACTaGGATCCTGGTAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: EERYTANWTPPWLFGNGTCGSFH*DPGRGP
Trigger: CGGACCCCTACCAGGATCCCAGTGAAAACTTCCGCA...CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCATGCGGAAGTTTTCACTaGGATCCTGGTAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLACGSFH*DPGRGP
Trigger: CGGACCCCTACCAGGATCCCAGTGAAAACTTCCGCA...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ATACGGCTGTTGGTGCATGTCACCACATTAACAACTCTGGGAAGAGCGATACACGGTTCATTGGCAGCGTaGAGTCCCCCTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: IRLLVHVTTLTTLGRAIHGSLAA*SPPCGS
Trigger: ACTTCCGCAAGGGGGACTCCACGCTGCCAATGAACC...GTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACATGCACCAACAGCCGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGAGGTTCATTGGCAGCGTaGAGTCCCCCTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRGSLAA*SPPCGS
Trigger: ACTTCCGCAAGGGGGACTCCACGCTGCCAATGAACC...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATGGGGTTCCGGTTCATTaGCAGCGTGGAGTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHGVPVH*QRGVPL
Trigger: AAGGGGGACTCCACGCTGCCAATGAACCGGAACCCC...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTGGGGTTCCGGTTCATTaGCAGCGTGGAGTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPGVPVH*QRGVPL
Trigger: AAGGGGGACTCCACGCTGCCAATGAACCGGAACCCC...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACAAGCTTCTGCAGTGCGTaGAGTTCTGCCGGTATCGCT +
Preference number: 4 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTSFCSA*SSAGIA
Trigger: AGCGATACCGGCAGAACTCCACGCACTGCAGAAGCT...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTAAGACCTGCTCCCCGGTaGCTGGGTTACCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVRPAPR*LGYLSP
Trigger: AGGAGACAGGTAACCCAGCCACCGGGGAGCAGGTCT...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CCCTTCTGCCTTTCAAAAATGAAAGGAAGCTCCTCTCACCCACTGCCTCCCTCTCGTTGGTCATCCCTGTaGGAGTGGAGGAAAGGGTTA +
Preference number: 4 (lower is better)
Translates to: PFCLSKMKGSSSHPLPPSRWSSL*EWRKGL
Trigger: TAACCCTTTCCTCCACTCCCACAGGGATGACCAACG...AGAGGGAGGCAGTGGGTGAGAGGAGCTTCCTTTCATTTTTGAAAGGCAGAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GCTGCCGTAAAAATTTCCCTCCAGAAGCCGTTCCCTGTCCTTGAGGCTTATGCTCCAATAACCAAGCGTTaGTCATCCCTGTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: AAVKISLQKPFPVLEAYAPITKR*SSLWEW
Trigger: CCACTCCCACAGGGATGACCAACGCTTGGTTATTGG...AGCATAAGCCTCAAGGACAGGGAACGGCTTCTGGAGGGAAATTTTTACGGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTGACGACACTGTCATTCACCGCCTaGGATGGCAACGAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: PGFRGHQRKTESLFGLTTLSFTA*DGNECL
Trigger: CAAACACTCGTTGCCATCCCAGGCGGTGAATGACAG...TGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTGGTCCCTCGGGCCTTTaGCTCCAGATGTGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIGPSGL*LQMCLG
Trigger: TCCAAGACACATCTGGAGCCAAAGGCCCGAGGGACC...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGTCCATGGCTGGGTCTTaGGGCAGCAGAGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQSMAGS*GSRGTA
Trigger: TGCTGTACCTCTGCTGCCCCAAGACCCAGCCATGGA...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535259.6
CDS-3UTR CCA 90 bp GATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCAAGGCTTCTCCATGGCTaGGTCTTGGGGCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: DVKEDKPKTMLAFGRQMARLLHG*VLGQQR
Trigger: CCTCTGCTGCCCCAAGACCCAGCCATGGAGAAGCCT...TGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCATAGATGCGCCCCCATaGATGCCCAAGATGGGGACG +
Preference number: 4 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTIDAPP*MPKMGT
Trigger: CGTCCCCATCTTGGGCATTCATGGGGGCGCATCTAT...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR TCA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGCTATGTCTTCCACGATaGCGAATGGGGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQLCLPR*RMGPPP
Trigger: TGGAGGAGGCCCCATTCGTCATCGTGGAAGACATAG...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR TCA 90 bp TTCTCGGGCAGGGTCACATTTTCAACAAACTGGGGTGGATCTAAGTGGAAACCACTATGTCTTCCACGATaGCGAATGGGGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FSGRVTFSTNWGGSKWKPLCLPR*RMGPPP
Trigger: TGGAGGAGGCCCCATTCGTCATCGTGGAAGACATAG...TGGTTTCCACTTAGATCCACCCCAGTTTGTTGAAAATGTGACCCTGCCCGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCGCGAGCCAACTGCCATaGCTGCCCGTTGATAGACCA +
Preference number: 4 (lower is better)
Translates to: SPLASNASLLPTYPVGMSASQLP*LPVDRP
Trigger: TGGTCTATCAACGGGCAGTCATGGCAGTTGGCTCGC...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACACCCAGACAGAGGCGCTaGATGGTTCTAGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTPRQRR*MVLEKQ
Trigger: CTGCTTTTCTAGAACCATTCAGCGCCTCTGTCTGGG...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp GATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCATCCCCGTTTTCAGGCTaGCCAAGGCGTCCTCTACTC +
Preference number: 4 (lower is better)
Translates to: DVKEDKPKTMLAFGRQMASPFSG*PRRPLL
Trigger: GAGTAGAGGACGCCTTGGTCAGCCTGAAAACGGGGA...TGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp ACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCCGGAGCACACGCCCGTaGAACAGAAGCGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: TEFLDVKEDKPKTMLAFGRSTRP*NRSAAS
Trigger: GGAAGCTGCGCTTCTGTTTCACGGGCGTGTGCTCCG...GCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGATGTAGATGCCCCTGCTaGTGGAGAAGAGCAACCCAG +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRCRCPC*WRRATQ
Trigger: CTGGGTTGCTCTTCTCCATCAGCAGGGGCATCTACA...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGTGTAGATGCCCCTGCTaGTGGAGAAGAGCAACCCAG +
Preference number: 4 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMCRCPC*WRRATQ
Trigger: CTGGGTTGCTCTTCTCCATCAGCAGGGGCATCTACA...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
CDS-3UTR TCA 90 bp CTCTTTAGGGAGTGGGTCCTATTCTCTGCTGTTGCCTCATCCCTCTGGGAGACTGTCTCTAGGGGAGCTTaGTTTGGTTTTCAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: LFREWVLFSAVASSLWETVSRGA*FGFQVG
Trigger: ACCTACCTGAAAACCAAATCAAGCTCCCCTAGAGAC...AGTCTCCCAGAGGGATGAGGCAACAGCAGAGAATAGGACCCACTCCCTAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTCATGGTGAAGTGGCCTaGATAGGTGGGCATGTTGGA +
Preference number: 4 (lower is better)
Translates to: GIQCIIIANIPSRHVPETHGEVA*IGGHVG
Trigger: TCCAACATGCCCACCTATTCAGGCCACTTCACCATG...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTAGGGGGACCTCATGGTaGAGTGGCCTGAATAGGTGG +
Preference number: 4 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPRGTSW*SGLNRW
Trigger: CCACCTATTCAGGCCACTTCACCATGAGGTCCCCCT...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TTGGAAAGGCAGCTTCTGCAGTGCGTGGAGTTCTGCCGGTATCGCTCGCTGGTCTTGTTCTTTTGTAATTaGAGGGCATTGTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LERQLLQCVEFCRYRSLVLFFCN*RALFCA
Trigger: GGCACAGAACAATGCCCTTCAATTACAAAAGAACAA...GACCAGCGAGCGATACCGGCAGAACTCCACGCACTGCAGAAGCTGCCTTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp GGCATTTGGCAGCCCCCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTATTCCATGCATCCTTaGGCTTTAAGGGAATCATCC +
Preference number: 4 (lower is better)
Translates to: GIWQPPGFRGHQRKTESLYSMHP*ALRESS
Trigger: GGATGATTCCCTTAAAGCTCAAGGATGCATGGAATA...GAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGGGGGCTGCCAAATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTGGCTGCTGGGAGTTGTaGGACCGGGAGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLGCWEL*DRELLS
Trigger: GCTCAGCAGCTCCCGGTCGCACAACTCCCAGCAGCC...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS-3UTR GCA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCAGCTCCACTCCAGGGTaGACAGGAGAATGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QQNTSLHLLPLSRALLDISSTPG*TGEWEP
Trigger: GGGCTCCCATTCTCCTGTGCACCCTGGAGTGGAGCT...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS-3UTR GCA 90 bp TACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGTTATGGTGGCTCTTGGGGTCGGTaGGGTTCATCAGCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: YTANWTPPWLFGNGTSYGGSWGR*GSSAEL
Trigger: TAGCTCTGCTGATGAACCGCACCGACCCCAAGAGCC...ACCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCATGCGCCCCCATGAATaGCCAAGATGGGGACGAAGG +
Preference number: 4 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTMRPHE*PRWGRR
Trigger: CCTTCGTCCCCATCTTGGGCATTCATGGGGGCGCAT...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCAAGCATGACCGTGGCTTaGTGCTGGATGGACGCTCCA +
Preference number: 4 (lower is better)
Translates to: EPNFLISCTCQSHYSADASMTVA*CWMDAP
Trigger: TGGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCT...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGATGGTTAGGATGCCAATaGCGTCCCTCACTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRWLGCQ*RPSLSP
Trigger: AGGCGAGAGTGAGGGACGGCATTGGCATCCTAACCA...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTTGGTTAGGATGCCAATaGCGTCCCTCACTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIWLGCQ*RPSLSP
Trigger: AGGCGAGAGTGAGGGACGGCATTGGCATCCTAACCA...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCCAGCGGTGGTTAGGATaGCAATGCCGTCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTQRWLG*QCRPSL
Trigger: GAGTGAGGGACGGCATTGGCATCCTAACCACCGCTG...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCAATGGGTGCAAGGTGTaGATCGGGACCTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SPLASNASLLPTYPVGMSNGCKV*IGTSGL
Trigger: GAGGCCAGAGGTCCCGATGCACACCTTGCACCCATT...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GAAGAGCGATACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGGCCAACTGCCATGACTaGCCGTTGATAGACCACTTC +
Preference number: 4 (lower is better)
Translates to: EERYTANWTPPWLFGNGTANCHD*PLIDHF
Trigger: GAAGTGGTCTATCAACGGGCAGTCATGGCAGTTGGC...CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGGGTGAGCGAGCCAACTaGCATGACTGCCCGTTGATA +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITGERAN*HDCPLI
Trigger: TATCAACGGGCAGTCATGGCAGTTGGCTCGCTCACC...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp ATCCTGGTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTCAACCTTGTAATTCAAGACTaGGGCATCGTAGATGAAAGC +
Preference number: 4 (lower is better)
Translates to: ILVGVREVHVLGQGHIFNLVIQD*GIVDES
Trigger: GCTTTCATCTACGATGCCGCAGTCTTGAATTACAAG...GTTGAAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGACCCCTACCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGAAGGCCAGGTCGATCTaGCTCTTCCAAGGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQKARSI*LFQGEP
Trigger: AGGCTCTCCTTGGAAGAGGCAGATCGACCTGGCCTT...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATCGCTTTGGATTCTGTaGTCACGGCCACCTCCACCG +
Preference number: 4 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVSLWIL*SRPPPP
Trigger: CGGTGGAGGTGGCCGTGAGCACAGAATCCAAAGCGA...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATTCGCTTTGGATTCTGTaGTCACGGCCACCTCCACCG +
Preference number: 4 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHSLWIL*SRPPPP
Trigger: CGGTGGAGGTGGCCGTGAGCACAGAATCCAAAGCGA...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATCGCTTTGGATTCTGTaGTCACGGCCACCTCCACCG +
Preference number: 4 (lower is better)
Translates to: EPNFLISCTCQSHYSADASLWIL*SRPPPP
Trigger: CGGTGGAGGTGGCCGTGAGCACAGAATCCAAAGCGA...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCTGGTTTTCAGGTAGGTaGGCTCGACCTCACTACAGT +
Preference number: 4 (lower is better)
Translates to: SEIYTSLWPRLSLEQYDAWFSGR*ARPHYS
Trigger: ACTGTAGTGAGGTCGAGCGCACCTACCTGAAAACCA...GGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp ATGGAATCCACGGATTTCTTCCACAGCTGCCGGGGTCTAGAGTTCGCTTTGGATTGGTTTTCAGGTAGGTaGGCTCGACCTCACTACAGT +
Preference number: 4 (lower is better)
Translates to: MESTDFFHSCRGLEFALDWFSGR*ARPHYS
Trigger: ACTGTAGTGAGGTCGAGCGCACCTACCTGAAAACCA...ATCCAAAGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATCCGTGGATTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATCAGTGCGTGGAGTTCTaGCGGTATCGCTCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: RALLDIQHLPSRTLAITYQCVEF*RYRSLV
Trigger: GACCAGCGAGCGATACCGGCAGAACTCCACGCACTG...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGGAAAGGCAGCTTCTaGAGTGCGTGGAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMAWKGSF*SAWSSA
Trigger: GGCAGAACTCCACGCACTGCAGAAGCTGCCTTTCCA...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGGAGACTTGCTCCTCTTaGTGTCCTCCAGACCTTGGG +
Preference number: 4 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGETCSS*CPPDLG
Trigger: CCCAAGGTCTGGAGGACAGCAAGAGGAGCAAGTCTC...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAACTGGCAAGAGAGACTTaGTCCTCTTGCTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQLARET*SSCCPP
Trigger: TGGAGGACAGCAAGAGGAGCAAGTCTCTCTTGCCAG...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CCGAAGATAGCTGTCATTCACCGCCTGGGATGGCAACGAGTGTTTGTAAGGGTCTGGCATGAAGCCGTGTaGAAAAGAGCCAACAACAAC +
Preference number: 4 (lower is better)
Translates to: PKIAVIHRLGWQRVFVRVWHEAV*KRANNN
Trigger: GTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCA...GACCCTTACAAACACTCGTTGCCATCCCAGGCGGTGAATGACAGCTATCTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp ATCCTGGTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTCAACCATGTCCCGGAGACTTaGCCTTATGTAGTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: ILVGVREVHVLGQGHIFNHVPET*PYVVSY
Trigger: ATAACTAACTACATAAGGGCAAGTCTCCGGGACATG...GTTGAAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGACCCCTACCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTAGCTCCTCTCACCCACTaGCTCCCTCTGTCTCCCTAT +
Preference number: 4 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVAPLTH*LPLSPY
Trigger: ATAGGGAGACAGAGGGAGGCAGTGGGTGAGAGGAGC...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CCCTTCTGCCTTTCAAAAATGAAAGGAAGCTCCTCTCACCCACTGCCTCCCTCTGTGTGCTCAGGGGCATaGCTGCAGGATATGTTAAAC +
Preference number: 4 (lower is better)
Translates to: PFCLSKMKGSSSHPLPPSVCSGA*LQDMLN
Trigger: GTTTAACATATCCTGCAGGCATGCCCCTGAGCACAC...AGAGGGAGGCAGTGGGTGAGAGGAGCTTCCTTTCATTTTTGAAAGGCAGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATACCCAGCGCCGGCTGCTaGGAGTTGTGCGACCGGGAG +
Preference number: 4 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGIPSAGC*ELCDRE
Trigger: CTCCCGGTCGCACAACTCCCAGCAGCCGGCGCTGGG...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS-3UTR CCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTGGGTGCACAGGAGAATaGGAGCCCCAGGTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSGCTGE*EPQVGH
Trigger: GTGGCCAACCTGGGGCTCCCATTCTCCTGTGCACCC...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS-3UTR CCA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTCCAAACACGAGGCCGTaGATGCGTGCCCCGGACATG +
Preference number: 4 (lower is better)
Translates to: NPDLRKCHNIATILSGALPNTRP*MRAPDM
Trigger: CATGTCCGGGGCACGCATCCACGGCCTCGTGTTTGG...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGTGGGCTACGGCCTCCTaGTCCGTGTCGTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: PPTERITQKGEIACLTKLWATAS*SVSSPN
Trigger: GTTTGGGGACGACACGGACCAGGAGGCCGTAGCCCA...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTATAAAATCCAGCATCTaGGCTACGGCCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GIQCIIIANIPSRHVPETIKSSI*ATASWS
Trigger: GGACCAGGAGGCCGTAGCCCAGATGCTGGATTTTAT...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000675398.1
CDS-3UTR CCA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGCATGAATGCCCAAGATaGGGACGAAGGTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQHECPR*GRRCGR
Trigger: CCTCCCACACCTTCGTCCCCATCTTGGGCATTCATG...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACATGGCTTGCTGCTGGATaGACGCTCCAAACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTWLAAG*TLQTGR
Trigger: TCTTCCAGTTTGGAGCGTCCATCCAGCAGCAAGCCA...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGTGGCTTGCTGCTGGATaGACGCTCCAAACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: YLVSAMLSTHLTRFLEWKWLAAG*TLQTGR
Trigger: TCTTCCAGTTTGGAGCGTCCATCCAGCAGCAAGCCA...CTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCACCGTGGCTTGCTGCTaGATGGACGCTCCAAACTGG +
Preference number: 4 (lower is better)
Translates to: SPLASNASLLPTYPVGMSTVACC*MDAPNW
Trigger: CCAGTTTGGAGCGTCCATCCAGCAGCAAGCCACGGT...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTGACGACACGATGGAAACTCTTTTaGGATGAGCTCCGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: PGFRGHQRKTESLFGLTTRWKLF*DELRVP
Trigger: GGGAACACGGAGCTCATCCCAAAAGAGTTTCCATCG...TGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TGTACCTATCTGAGGACTAGTTGGGTCCTTCTCAAGTGGGGAAAACCAATTAGACGTAGCAGCTGGCCTTaGCCTCGGGGATGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: CTYLRTSWVLLKWGKPIRRSSWP*PRGCRR
Trigger: TCTCCTACATCCCCGAGGCCAAGGCCAGCTGCTACG...TCTAATTGGTTTTCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATAGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCGTAGCAGCTGGCCTTaGCCTCGGGGATGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: QQNTSLHLLPLSRALLDIRSSWP*PRGCRR
Trigger: TCTCCTACATCCCCGAGGCCAAGGCCAGCTGCTACG...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTACAATCACCACCAGCCTaGGGTGCACCTGGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVQSPPA*GAPGSL
Trigger: AAGGCTACCAGGTGCACCCCAGGCTGGTGGTGATTG...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCTCAGGCTCAGCGTATaGTTCTCCCACTTGCCCACC +
Preference number: 4 (lower is better)
Translates to: SPLASNASLLPTYPVGMSLRLSV*FSHLPT
Trigger: GGTGGGCAAGTGGGAGAACCATACGCTGAGCCTGAG...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCCTCAGGCTCAGCGTATaGTTCTCCCACTTGCCCACC +
Preference number: 4 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTLRLSV*FSHLPT
Trigger: GGTGGGCAAGTGGGAGAACCATACGCTGAGCCTGAG...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAACTCAGGCTCAGCGTATaGTTCTCCCACTTGCCCACC +
Preference number: 4 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHELRLSV*FSHLPT
Trigger: GGTGGGCAAGTGGGAGAACCATACGCTGAGCCTGAG...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCAAGAAGGACTTGTACCTaGGCCACACGGCGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: DVKEDKPKTMLAFGRQMARRTCT*ATRRAS
Trigger: TGAGGCACGCCGTGTGGCCCAGGTACAAGTCCTTCT...TGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GGACGACCGAAGATAGCTGTCATTCACCGCCTGGGATGGCAACGAGTGTTTGTAGTCCCTTTAGGATTCTaGACAGGCACGGAGTTATTG +
Preference number: 4 (lower is better)
Translates to: GRPKIAVIHRLGWQRVFVVPLGF*TGTELL
Trigger: CAATAACTCCGTGCCTGTCCAGAATCCTAAAGGGAC...TACAAACACTCGTTGCCATCCCAGGCGGTGAATGACAGCTATCTTCGGTCGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAACTGAGGCCGGTCACTTaGTCCACAAATTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQLRPVT*STNSSW
Trigger: CCAAGAGGAATTTGTGGACCAAGTGACCGGCCTCAG...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTGACGACAGTGGGCCATCTCTTCTaGAAGATACCTAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PGFRGHQRKTESLFGLTTVGHLF*KIPRAL
Trigger: AAGAGCCCTAGGTATCTTCCAGAAGAGATGGCCCAC...TGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGAGTTCCCTGTGGCACGTaGCCCGATTTGACGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRVPCGT*PDLTFL
Trigger: CAGAAACGTCAAATCGGGCCACGTGCCACAGGGAAC...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTTTGTCAGGTTCCCTGTaGCACGTGGCCCGATTTGAC +
Preference number: 4 (lower is better)
Translates to: NASLLPTYPVGMSRRLALLSGSL*HVARFD
Trigger: GTCAAATCGGGCCACGTGCCACAGGGAACCTGACAA...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CCCTTCTGCCTTTCAAAAATGAAAGGAAGCTCCTCTCACCCACTGCCTCCCTCTTGGGGTGGATCTAAGTaGAAACCAGGCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PFCLSKMKGSSSHPLPPSWGGSK*KPGSFS
Trigger: TGAGAAGGAGCCTGGTTTCCACTTAGATCCACCCCA...AGAGGGAGGCAGTGGGTGAGAGGAGCTTCCTTTCATTTTTGAAAGGCAGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCGGGGTTCCGGTTCATTaGCAGCGTGGAGTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: EAVCKRANNNNNKIPPYIGVPVH*QRGVPL
Trigger: AAGGGGGACTCCACGCTGCCAATGAACCGGAACCCC...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGCATGTGCGTGCTATTACCCATGGACAGAGACCCAACCGTTTGCATTCAAGTAGCTTCTGCAGTGCGTaGAGTTCTGCCGGTATCGCT +
Preference number: 4 (lower is better)
Translates to: LHVRAITHGQRPNRLHSSSFCSA*SSAGIA
Trigger: AGCGATACCGGCAGAACTCCACGCACTGCAGAAGCT...ACTTGAATGCAAACGGTTGGGTCTCTGTCCATGGGTAATAGCACGCACATGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGAGCTTCTGCAGTGCGTaGAGTTCTGCCGGTATCGCT +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITSFCSA*SSAGIA
Trigger: AGCGATACCGGCAGAACTCCACGCACTGCAGAAGCT...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGCTTCTGCAGTGCGTaGAGTTCTGCCGGTATCGCT +
Preference number: 4 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVSFCSA*SSAGIA
Trigger: AGCGATACCGGCAGAACTCCACGCACTGCAGAAGCT...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GCCGTAAAAATTTCCCTCCAGAAGCCGTTCCCTGTCCTTGAGGCTTATGCTCCGAATAGGTGGGCATGTTaGAAAGGCAGCTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: AVKISLQKPFPVLEAYAPNRWAC*KGSFCS
Trigger: ACTGCAGAAGCTGCCTTTCCAACATGCCCACCTATT...CGGAGCATAAGCCTCAAGGACAGGGAACGGCTTCTGGAGGGAAATTTTTACGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp CACAGTTTGGAGGATACTCAGGGTAGATCCAAGAGTGCCTCGTGTTTTGAAGGCAGTGGCCTGAATAGGTaGGCATGTTGGAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: HSLEDTQGRSKSASCFEGSGLNR*ACWKGS
Trigger: GCTGCCTTTCCAACATGCCCACCTATTCAGGCCACT...GCCTTCAAAACACGAGGCACTCTTGGATCTACCCTGAGTATCCTCCAAACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGAAGACCTGCTCCCCGGTaGCTGGGTTACCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RRHKCVSLCSSEQDHRSRRPAPR*LGYLSP
Trigger: AGGAGACAGGTAACCCAGCCACCGGGGAGCAGGTCT...TCGGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTGGGTTATCGGAGGTGTaGTCTGGCAAGAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: GIQCIIIANIPSRHVPETGLSEV*SGKRDL
Trigger: CAAGTCTCTCTTGCCAGACCACACCTCCGATAACCC...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACATCATCCCTGTGGGAGTaGAGGAAAGGGTTATCGGAG +
Preference number: 4 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTSSLWE*RKGLSE
Trigger: CTCCGATAACCCTTTCCTCCACTCCCACAGGGATGA...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GAAGAGCGATACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGCCAATAACCAAGCGTTaGTCATCCCTGTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: EERYTANWTPPWLFGNGTPITKR*SSLWEW
Trigger: CCACTCCCACAGGGATGACCAACGCTTGGTTATTGG...CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GCATCTGGTCTTCATCGATGTCATAGAGGTTCCCCATCCGCAGGCAGGCATCGCTACCCTCCAGAACATTaGCCATTACGTATATTTCCC +
Preference number: 4 (lower is better)
Translates to: ASGLHRCHRGSPSAGRHRYPPEH*PLRIFP
Trigger: GGGAAATATACGTAATGGCCAATGTTCTGGAGGGTA...GCGATGCCTGCCTGCGGATGGGGAACCTCTATGACATCGATGAAGACCAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp CATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGTTGAGTGGAAGATTATaGCATGAAGCCGTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: HHCGPDCPWNSTMPLTSRLSGRL*HEAVCK
Trigger: TTTGCACACGGCTTCATGCCATAATCTTCCACTCAA...CCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTTCCATGGCTGGGTCTTaGGGCAGCAGAGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPSMAGS*GSRGTA
Trigger: TGCTGTACCTCTGCTGCCCCAAGACCCAGCCATGGA...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTAGGCTTCTCCATGGCTaGGTCTTGGGGCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLRLLHG*VLGQQR
Trigger: CCTCTGCTGCCCCAAGACCCAGCCATGGAGAAGCCT...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTGGAGGCGATCCTTGCTaGGGTGGATTAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: NASLLPTYPVGMSRRLALGGDPC*GGLRSG
Trigger: TCCAGACCTTAATCCACCCCAGCAAGGATCGCCTCC...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGGGAGGCGATCCTTGCTaGGGTGGATTAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVGGDPC*GGLRSG
Trigger: TCCAGACCTTAATCCACCCCAGCAAGGATCGCCTCC...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGGGAGGCGATCCTTGCTaGGGTGGATTAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQGGDPC*GGLRSG
Trigger: TCCAGACCTTAATCCACCCCAGCAAGGATCGCCTCC...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535259.6
CDS-3UTR CCA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATAGCAGTGGCCGCTCCTaGTCATCTCCAGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: RALLDIQHLPSRTLAITYSSGRS*SSPGLM
Trigger: CATCAGCCCTGGAGATGACCAGGAGCGGCCACTGCT...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396573.6
ENST00000675398.1
3UTR CAA 72 bp TACTGTTGTCAGGTTCCCTGTGGCACGTGGCCCGATTaGACGTTTCTGAAATGTCAGAGTGGGCCATCTCTT +
Preference number: 4 (lower is better)
Translates to: YCCQVPCGTWPD*TFLKCQSGPSL
Trigger: AAGAGATGGCCCACTCTGACATTTCAGAAACGTCAAATCGGGCCACGTGCCACAGGGAACCTGACAACAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp GAAGAGCGATACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGGAAGTGTCCAGTGTaGTCACATTCTGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: EERYTANWTPPWLFGNGTRKCPV*SHSACP
Trigger: GGGACATGCAGAATGTGATCACACTGGACACTTCCT...CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp GCAAACAATGACAACAGCAAAACTCTGATCCCACTTTGGGAGACAACAAGCCCTGGGCCTCACTCAGAATaGGAACAGCCTCGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: ANNDNSKTLIPLWETTSPGPHSE*EQPRLW
Trigger: CCAAAGACGAGGCTGTTCTCATTCTGAGTGAGGCCC...AGGGCTTGTTGTCTCCCAAAGTGGGATCAGAGTTTTGCTGTTGTCATTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR TCA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTAGAAATCATACCCGGTaGGGCCAAGGGAGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: PNLLHMSIALQCRCILNCRNHTR*GQGSGP
Trigger: AGGCCCGCTCCCTTGGCCTCACCGGGTATGATTTCT...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATGCGAGCCAACTGCCATaGCTGCCCGTTGATAGACCA +
Preference number: 4 (lower is better)
Translates to: RALLDIQHLPSRTLAITYASQLP*LPVDRP
Trigger: TGGTCTATCAACGGGCAGTCATGGCAGTTGGCTCGC...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCACCCAGACAGAGGCGCTaGATGGTTCTAGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMAPRQRR*MVLEKQ
Trigger: CTGCTTTTCTAGAACCATTCAGCGCCTCTGTCTGGG...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGCCCAGACAGAGGCGCTaGATGGTTCTAGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITPRQRR*MVLEKQ
Trigger: CTGCTTTTCTAGAACCATTCAGCGCCTCTGTCTGGG...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCACAGGCACGGAGTTATTaGACACCAGGCCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMAQARSY*TPGPKE
Trigger: TTCTTTGGGGCCTGGTGTTCAATAACTCCGTGCCTG...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGCCCATACAGATACCATaGTCTTGCTGGTGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGEPIQIP*SCWWSL
Trigger: AAGGGACCACCAGCAAGATCATGGTATCTGTATGGG...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp ACAGATGGCATTGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATCCCCGTTTTCAGGCTaGCCAAGGCGTCCTCTACTC +
Preference number: 4 (lower is better)
Translates to: TDGIVLLTDHSTHTAVGASPFSG*PRRPLL
Trigger: GAGTAGAGGACGCCTTGGTCAGCCTGAAAACGGGGA...TGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACAATGCCATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTTGTAGATGCCCCTGCTaGTGGAGAAGAGCAACCCAG +
Preference number: 4 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPCRCPC*WRRATQ
Trigger: CTGGGTTGCTCTTCTCCATCAGCAGGGGCATCTACA...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGGGATCCCGTCAGATTaGAGTCTGGAGACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQGIPSD*SLETSS
Trigger: AGAAGAAGTCTCCAGACTTCAATCTGACGGGATCCC...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTGGCTGACCGGAGGAGTTTTAACATGTTGCTCTGGGATCCCGTCAGATTGAAGGGGATCCCGTCAGATTaGAGTCTGGAGACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LADRRSFNMLLWDPVRLKGIPSD*SLETSS
Trigger: AGAAGAAGTCTCCAGACTTCAATCTGACGGGATCCC...CTTCAATCTGACGGGATCCCAGAGCAACATGTTAAAACTCCTCCGGTCAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACAATGCTCTCTTTCCCCTaGAAGGACCTGTTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTMLSFP*KDLLSE
Trigger: CTCAGACAACAGGTCCTTTCAGGGGAAAGAGAGCAT...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp GGATGGCAACGAGTGTTTGTAAGGGTCCGAGGGGCATCTCCCAATAACCAAGCGGTATTTGGAGGCCACTaGCCTTTTAAAGTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GWQRVFVRVRGASPNNQAVFGGH*PFKVVL
Trigger: AAGGACAACTTTAAAAGGTCAGTGGCCTCCAAATAC...CGCTTGGTTATTGGGAGATGCCCCTCGGACCCTTACAAACACTCGTTGCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACATGGTGAAGTGGCCTaGATAGGTGGGCATGTTGGA +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRHGEVA*IGGHVG
Trigger: TCCAACATGCCCACCTATTCAGGCCACTTCACCATG...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATAGGGGGACCTCATGGTaGAGTGGCCTGAATAGGTGG +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHRGTSW*SGLNRW
Trigger: CCACCTATTCAGGCCACTTCACCATGAGGTCCCCCT...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCACAGTACGATGCCGTTaGCCTCAAGGACGACCGAAG +
Preference number: 4 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTTVRCR*PQGRPK
Trigger: CTTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGT...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCACATCGAAGCCGAGGGTaGGAGAAACACACATCAACA +
Preference number: 4 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLAHRSRG*EKHTST
Trigger: TGTTGATGTGTGTTTCTCTCACCCTCGGCTTCGATG...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCCCACGACGCCCCCAGTaGGGATCCTCAGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFPRRPQ*GSSAPV
Trigger: CACAGGGGCTGAGGATCCGCACTGGGGGCGTCGTGG...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS-3UTR GCA 90 bp ACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAGAAATGCAGTGGGGCGCGCTaGGCGCACGAGCATCTCGGC +
Preference number: 4 (lower is better)
Translates to: TCKKIILTKQNAHHEEKKCSGAR*AHEHLG
Trigger: GCCGAGATGCTCGTGCGCGCAGCGCGCCCCACTGCA...TTTCTTCTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTATGCGCCCCCATGAATaGCCAAGATGGGGACGAAGG +
Preference number: 4 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLMRPHE*PRWGRR
Trigger: CCTTCGTCCCCATCTTGGGCATTCATGGGGGCGCAT...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000675398.1
CDS-3UTR GCA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCATGCGCCCCCATGAATaGCCAAGATGGGGACGAAGG +
Preference number: 4 (lower is better)
Translates to: EAVCKRANNNNNKIPPYIMRPHE*PRWGRR
Trigger: CCTTCGTCCCCATCTTGGGCATTCATGGGGGCGCAT...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAAGCCATGATCATAGATaGGCCCCCATGAATGCCCAA +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQSHDHR*APMNAQ
Trigger: TTGGGCATTCATGGGGGCGCATCTATGATCATGGCT...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCATGACCGTGGCTTGCTaGTGGATGGACGCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTMTVAC*WMDAPN
Trigger: GTTTGGAGCGTCCATCCAGCAGCAAGCCACGGTCAT...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATGGTTAGGATGCCAATaGCGTCCCTCACTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: EPNFLISCTCQSHYSADAWLGCQ*RPSLSP
Trigger: AGGCGAGAGTGAGGGACGGCATTGGCATCCTAACCA...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGTTAGGATGCCAATaGCGTCCCTCACTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSWLGCQ*RPSLSP
Trigger: AGGCGAGAGTGAGGGACGGCATTGGCATCCTAACCA...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAGCGGTGGTTAGGATaGCAATGCCGTCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: QQNTSLHLLPLSRALLDIQRWLG*QCRPSL
Trigger: GAGTGAGGGACGGCATTGGCATCCTAACCACCGCTG...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAATTGACCATAAATGGGTaGAAGGTGTGCATCGGGACC +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQLTING*KVCIGT
Trigger: GGTCCCGATGCACACCTTGCACCCATTTATGGTCAA...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp ACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCCTATAGACTGGGCCACACGGCGTaGCTCAGGCTCAGCGTATGG +
Preference number: 4 (lower is better)
Translates to: TSNIYPPEHWPLRIFPYRLGHTA*LRLSVW
Trigger: CCATACGCTGAGCCTGAGGCACGCCGTGTGGCCCAG...TCTATAGGGAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTAGGTGAGCGAGCCAACTaGCATGACTGCCCGTTGATA +
Preference number: 4 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVGERAN*HDCPLI
Trigger: TATCAACGGGCAGTCATGGCAGTTGGCTCGCTCACC...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCTCGCTTTGGATTCTGTaGTCACGGCCACCTCCACCG +
Preference number: 4 (lower is better)
Translates to: LGDINVLVYAALNKTIEASLWIL*SRPPPP
Trigger: CGGTGGAGGTGGCCGTGAGCACAGAATCCAAAGCGA...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp ATACGGCTGTTGGTGCATGTCACCACATTAACAACTCTGGGAAGAGCGATACACGTGGGTCCTATTCTCTaGTGTTGCCTCATCCCTCTG +
Preference number: 4 (lower is better)
Translates to: IRLLVHVTTLTTLGRAIHVGPIL*CCLIPL
Trigger: CAGAGGGATGAGGCAACAGCAGAGAATAGGACCCAC...GTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACATGCACCAACAGCCGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CATAACATAGCAACTATCTTGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTGGTGGGTCCTATTCTCTaGTGTTGCCTCATCCCTCTG +
Preference number: 4 (lower is better)
Translates to: HNIATILSGALVFVAGTVVGPIL*CCLIPL
Trigger: CAGAGGGATGAGGCAACAGCAGAGAATAGGACCCAC...CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGTGGTTTTCAGGTAGGTaGGCTCGACCTCACTACAGT +
Preference number: 4 (lower is better)
Translates to: YLVSAMLSTHLTRFLEWKWFSGR*ARPHYS
Trigger: ACTGTAGTGAGGTCGAGCGCACCTACCTGAAAACCA...CTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTGCGTGGAGTCCCCCTTaGGGAAGTTTTCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPAWSPP*GSFHWD
Trigger: ATCCCAGTGAAAACTTCCGCAAGGGGGACTCCACGC...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AGCATAAGGCATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCTCGCTGGTCTCACTGTaGGGGGAACCCTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: SIRHNMLRNIHIIVAPTVSLVSL*GEPLSF
Trigger: GAAAGACAAGGGTTCCCCGCACAGTGAGACCAGCGA...GACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTTGGAAAGGCAGCTTCTaGAGTGCGTGGAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPWKGSF*SAWSSA
Trigger: GGCAGAACTCCACGCACTGCAGAAGCTGCCTTTCCA...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTAAGGGCATTGTTCTGTaGCCAGTCCTGCTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: NASLLPTYPVGMSRRLALKGIVL*PVLLVD
Trigger: GTCTACCAGCAGGACTGGGCACAGAACAATGCCCTT...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp ATACGGCTGTTGGTGCATGTCACCACATTAACAACTCTGGGAAGAGCGATACACCTGGCAAGAGAGACTTaGTCCTCTTGCTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: IRLLVHVTTLTTLGRAIHLARET*SSCCPP
Trigger: TGGAGGACAGCAAGAGGAGCAAGTCTCTCTTGCCAG...GTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACATGCACCAACAGCCGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGCACCTATCTGGTGTCTaGCATGCTCAGCACACACCT +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITHLSGV*HAQHTP
Trigger: AGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTG...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCACCTATCTGGTGTCTaGCATGCTCAGCACACACCT +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIHLSGV*HAQHTP
Trigger: AGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTG...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp ACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCCTATAGATCCAGGGCTGATGGCTaGGGCCGCGATTCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: TSNIYPPEHWPLRIFPYRSRADG*GRDSQR
Trigger: GCGCTGAGAATCGCGGCCGCAGCCATCAGCCCTGGA...TCTATAGGGAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396573.6
ENST00000675398.1
CDS-3UTR GCA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACGTCGGATCCTCCTCCTaGCATGGCTCAGCCTGTATT +
Preference number: 4 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHVGSSS*HGSACI
Trigger: AATACAGGCTGAGCCATGGCAGGAGGAGGATCCGAC...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535259.6
CDS-3UTR CCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTGGGCTACGGCCTCCTaGTCCGTGTCGTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYIWATAS*SVSSPN
Trigger: GTTTGGGGACGACACGGACCAGGAGGCCGTAGCCCA...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGATAAAATCCAGCATCTaGGCTACGGCCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMIKSSI*ATASWS
Trigger: GGACCAGGAGGCCGTAGCCCAGATGCTGGATTTTAT...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAATGGGGACGAAGGTGTaGGAGGAGATAAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQMGTKV*EEIKSS
Trigger: GCTGGATTTTATCTCCTCCCACACCTTCGTCCCCAT...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATCATGAATGCCCAAGATaGGGACGAAGGTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHHECPR*GRRCGR
Trigger: CCTCCCACACCTTCGTCCCCATCTTGGGCATTCATG...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACAATGGACGCTCCAAACTaGAAGAAGGTAGACGTCGGA +
Preference number: 4 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTMDAPN*KKVDVG
Trigger: TCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCAT...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTGGCTGACCGGAGGAGTTTTAACATGTTGCTCTGGGATCCCGTCAGATTGAAGATGGACGCTCCAAACTaGAAGAAGGTAGACGTCGGA +
Preference number: 4 (lower is better)
Translates to: LADRRSFNMLLWDPVRLKMDAPN*KKVDVG
Trigger: TCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCAT...CTTCAATCTGACGGGATCCCAGAGCAACATGTTAAAACTCCTCCGGTCAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGTGGCTTGCTGCTGGATaGACGCTCCAAACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVWLAAG*TLQTGR
Trigger: TCTTCCAGTTTGGAGCGTCCATCCAGCAGCAAGCCA...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCACCGTGGCTTGCTGCTaGATGGACGCTCCAAACTGG +
Preference number: 4 (lower is better)
Translates to: LGDINVLVYAALNKTIEATVACC*MDAPNW
Trigger: CCAGTTTGGAGCGTCCATCCAGCAGCAAGCCACGGT...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TGTACCTATCTGAGGACTAGTTGGGTCCTTCTCAAGTGGGGAAAACCAATTAGAACCGTGGCTTGCTGCTaGATGGACGCTCCAAACTGG +
Preference number: 4 (lower is better)
Translates to: CTYLRTSWVLLKWGKPIRTVACC*MDAPNW
Trigger: CCAGTTTGGAGCGTCCATCCAGCAGCAAGCCACGGT...TCTAATTGGTTTTCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATAGGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAACCGTGGCTTGCTGCTaGATGGACGCTCCAAACTGG +
Preference number: 4 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQTVACC*MDAPNW
Trigger: CCAGTTTGGAGCGTCCATCCAGCAGCAAGCCACGGT...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACACGTAGCAGCTGGCCTTaGCCTCGGGGATGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTRSSWP*PRGCRR
Trigger: TCTCCTACATCCCCGAGGCCAAGGCCAGCTGCTACG...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTGTGCATCGGGACCTCTaGCCTCTCCATCTGCCCGTA +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLVHRDL*PLHLPV
Trigger: TACGGGCAGATGGAGAGGCCAGAGGTCCCGATGCAC...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATCAATCACCACCAGCCTaGGGTGCACCTGGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: RALLDIQHLPSRTLAITYQSPPA*GAPGSL
Trigger: AAGGCTACCAGGTGCACCCCAGGCTGGTGGTGATTG...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AGTAGAGTTTATACTGGTCGTTGTTGGAAAGCCCCTCTTCATTATGCAAGGGGTCTCAGGCTCAGCGTATaGTTCTCCCACTTGCCCACC +
Preference number: 4 (lower is better)
Translates to: SRVYTGRCWKAPLHYARGLRLSV*FSHLPT
Trigger: GGTGGGCAAGTGGGAGAACCATACGCTGAGCCTGAG...ACCCCTTGCATAATGAAGAGGGGCTTTCCAACAACGACCAGTATAAACTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATAAGAAGGACTTGTACCTaGGCCACACGGCGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LYTRLLLQEFKTLGVEYIRRTCT*ATRRAS
Trigger: TGAGGCACGCCGTGTGGCCCAGGTACAAGTCCTTCT...TATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGGACGAACTTCCGACATaGCACGGTGTTCCTCACACA +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITDELPT*HGVPHT
Trigger: TGTGTGAGGAACACCGTGCCATGTCGGAAGTTCGTC...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCATTCCATAACCGGTGGTaGCAAAGATGTACCCACTCC +
Preference number: 4 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLAFHNRW*QRCTHS
Trigger: GGAGTGGGTACATCTTTGCCACCACCGGTTATGGAA...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GGAAGATACCTAGGGCTCTTTAGGGAGTGGGTCCTATTCTCTGCTGTTGCCTCAGTGAATCCTGGCGTATaGAATCCACGGATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GRYLGLFREWVLFSAVASVNPGV*NPRISS
Trigger: GGAAGAAATCCGTGGATTCCATACGCCAGGATTCAC...TGAGGCAACAGCAGAGAATAGGACCCACTCCCTAAAGAGCCCTAGGTATCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATGTTCCCTGTGGCACGTaGCCCGATTTGACGTTTCTG +
Preference number: 4 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHVPCGT*PDLTFL
Trigger: CAGAAACGTCAAATCGGGCCACGTGCCACAGGGAAC...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTCACTACAGTCCTTaGGGTATTTGGAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIPHYSP*GIWRPL
Trigger: CAGTGGCCTCCAAATACCCCAAGGACTGTAGTGAGG...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGCCTCACTACAGTCCTTaGGGTATTTGGAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITPHYSP*GIWRPL
Trigger: CAGTGGCCTCCAAATACCCCAAGGACTGTAGTGAGG...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATGGTTCATTGGCAGCGTaGAGTCCCCCTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHGSLAA*SPPCGS
Trigger: ACTTCCGCAAGGGGGACTCCACGCTGCCAATGAACC...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGGGTTCATTGGCAGCGTaGAGTCCCCCTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQGSLAA*SPPCGS
Trigger: ACTTCCGCAAGGGGGACTCCACGCTGCCAATGAACC...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGGGGGTTCCGGTTCATTaGCAGCGTGGAGTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: PPTERITQKGEIACLTKLGVPVH*QRGVPL
Trigger: AAGGGGGACTCCACGCTGCCAATGAACCGGAACCCC...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ATAAGGCATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTAGCTTCTGCAGTGCGTaGAGTTCTGCCGGTATCGCT +
Preference number: 4 (lower is better)
Translates to: IRHNMLRNIHIIVAPTVPSFCSA*SSAGIA
Trigger: AGCGATACCGGCAGAACTCCACGCACTGCAGAAGCT...AGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTAGCTTCTGCAGTGCGTaGAGTTCTGCCGGTATCGCT +
Preference number: 4 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSSFCSA*SSAGIA
Trigger: AGCGATACCGGCAGAACTCCACGCACTGCAGAAGCT...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCCTGCTCCCCGGTGGCTaGGTTACCTGTCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: TEFLDVKEDKPKTMLAFGLLPGG*VTCLLK
Trigger: CTTCAGGAGACAGGTAACCCAGCCACCGGGGAGCAG...GCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCAATCGGAGGTGTGGTCTaGCAAGAGAGACTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMAIGGVV*QERLAP
Trigger: AGGAGCAAGTCTCTCTTGCCAGACCACACCTCCGAT...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CATAACATAGCAACTATCTTGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTGATCGGAGGTGTGGTCTaGCAAGAGAGACTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: HNIATILSGALVFVAGTVIGGVV*QERLAP
Trigger: AGGAGCAAGTCTCTCTTGCCAGACCACACCTCCGAT...CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGCGTTGGTCATCCCTGTaGGAGTGGAGGAAAGGGTTA +
Preference number: 4 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMRWSSL*EWRKGL
Trigger: TAACCCTTTCCTCCACTCCCACAGGGATGACCAACG...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTCCAATAACCAAGCGTTaGTCATCCCTGTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: NASLLPTYPVGMSRRLALPITKR*SSLWEW
Trigger: CCACTCCCACAGGGATGACCAACGCTTGGTTATTGG...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATGGCCCCGACTGTCCCTaGAACAGTACGATGCCGTTG +
Preference number: 4 (lower is better)
Translates to: FSYISVGAMKWFATNRENGPDCP*NSTMPL
Trigger: CAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCC...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GGCCTGAATAGGTGGGCATGTTGGAAAGGCAGCTTCTGCAGTGCGTGGAGTTCTTTGAGTGGAAGATTATaGCATGAAGCCGTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: GLNRWACWKGSFCSAWSSLSGRL*HEAVCK
Trigger: TTTGCACACGGCTTCATGCCATAATCTTCCACTCAA...AGAACTCCACGCACTGCAGAAGCTGCCTTTCCAACATGCCCACCTATTCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp TATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGAAGGACTCACCTATCTaGTGTCTGCCATGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: YLVSAMLSTHLTRFLEWKKDSPI*CLPCSA
Trigger: TGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTT...CTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ATCCTGGTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTCAACGATGAGAAAATTACATaGTGGGCTGACCTTAATGGA +
Preference number: 4 (lower is better)
Translates to: ILVGVREVHVLGQGHIFNDEKIT*WADLNG
Trigger: TCCATTAAGGTCAGCCCACCATGTAATTTTCTCATC...GTTGAAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGACCCCTACCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGGTCCCTCGGGCCTTTaGCTCCAGATGTGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: LGDINVLVYAALNKTIEAGPSGL*LQMCLG
Trigger: TCCAAGACACATCTGGAGCCAAAGGCCCGAGGGACC...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTGACGACAAATTGGACACCACCATaGCTGTTTGGAAACGGAACG +
Preference number: 4 (lower is better)
Translates to: PGFRGHQRKTESLFGLTTNWTPP*LFGNGT
Trigger: CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATT...TGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATTCCATGGCTGGGTCTTaGGGCAGCAGAGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: RALLDIQHLPSRTLAITYSMAGS*GSRGTA
Trigger: TGCTGTACCTCTGCTGCCCCAAGACCCAGCCATGGA...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGAGGCTTCTCCATGGCTaGGTCTTGGGGCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PPTERITQKGEIACLTKLRLLHG*VLGQQR
Trigger: CCTCTGCTGCCCCAAGACCCAGCCATGGAGAAGCCT...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGAGGGTGGATTAAGGTCTaGAATGCACTGGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRGWIKV*NALEGQ
Trigger: CTGCCCTTCCAGTGCATTCCAGACCTTAATCCACCC...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAACCAGGGCAGCCTTATaGGGATCTCTGGCTCTTATT +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQTRAAL*GSLALI
Trigger: AATAAGAGCCAGAGATCCCCATAAGGCTGCCCTGGT...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CAA 72 bp AGCGATACACAGCTAATTGGACACCACCATGGCTGTTaGGAAACGGAACGAGTTATGGTTACTCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SDTQLIGHHHGC*ETERVMVTLGG
Trigger: CCCTCCCAGAGTAACCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CAA 72 bp AAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTaGCTGGGGTGGATTAAGGTCTGGAATGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: KHPRLMRKWRRS*LGWIKVWNALE
Trigger: TTCCAGTGCATTCCAGACCTTAATCCACCCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGAGGAAGTGTCCAGTGTaGTCACATTCTGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMRKCPV*SHSACP
Trigger: GGGACATGCAGAATGTGATCACACTGGACACTTCCT...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTAGGAAGTGTCCAGTGTaGTCACATTCTGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: NASLLPTYPVGMSRRLALRKCPV*SHSACP
Trigger: GGGACATGCAGAATGTGATCACACTGGACACTTCCT...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGAGAAACTCTTTTGGGATaGGCTCCGTGTTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRETLLG*APCSQR
Trigger: TCTCTGGGAACACGGAGCTCATCCCAAAAGAGTTTC...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGCGTAGGAGACAGAAATaGGTCCCGATGGAAACTCTT +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGERRRQK*VPMETL
Trigger: AAGAGTTTCCATCGGGACTCATTTCTGTCTCCTACG...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTCGTAGGAGACAGAAATaGGTCCCGATGGAAACTCTT +
Preference number: 4 (lower is better)
Translates to: GIQCIIIANIPSRHVPETRRRQK*VPMETL
Trigger: AAGAGTTTCCATCGGGACTCATTTCTGTCTCCTACG...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp ACAGATGGCATTGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCACTATGTCTTCCACGATaGCGAATGGGGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TDGIVLLTDHSTHTAVGALCLPR*RMGPPP
Trigger: TGGAGGAGGCCCCATTCGTCATCGTGGAAGACATAG...TGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACAATGCCATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTGCGAGCCAACTGCCATaGCTGCCCGTTGATAGACCA +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLASQLP*LPVDRP
Trigger: TGGTCTATCAACGGGCAGTCATGGCAGTTGGCTCGC...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CCCTTCTGCCTTTCAAAAATGAAAGGAAGCTCCTCTCACCCACTGCCTCCCTCTGGTGCCATTACTTCTTaGAACCATGACACTGATTCC +
Preference number: 4 (lower is better)
Translates to: PFCLSKMKGSSSHPLPPSGAITS*NHDTDS
Trigger: GGAATCAGTGTCATGGTTTCAAGAAGTAATGGCACC...AGAGGGAGGCAGTGGGTGAGAGGAGCTTCCTTTCATTTTTGAAAGGCAGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGGTGCCATTACTTCTTaGAACCATGACACTGATTCC +
Preference number: 4 (lower is better)
Translates to: SEIYTSLWPRLSLEQYDAGAITS*NHDTDS
Trigger: GGAATCAGTGTCATGGTTTCAAGAAGTAATGGCACC...GGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR TCA 90 bp AGCATAAGGCATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCCAGACAGAGGCGCTaGATGGTTCTAGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SIRHNMLRNIHIIVAPTVPRQRR*MVLEKQ
Trigger: CTGCTTTTCTAGAACCATTCAGCGCCTCTGTCTGGG...GACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR TCA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTCAGGCACGGAGTTATTaGACACCAGGCCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPQARSY*TPGPKE
Trigger: TTCTTTGGGGCCTGGTGTTCAATAACTCCGTGCCTG...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGCCCATACAGATACCATaGTCTTGCTGGTGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMPIQIP*SCWWSL
Trigger: AAGGGACCACCAGCAAGATCATGGTATCTGTATGGG...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGAGGGAACCTCTTTGGATaGAGTCAGCAGCTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRGNLFG*SQQLFW
Trigger: CCAAAAGAGCTGCTGACTTCATCCAAAGAGGTTCCC...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGGGGAACCTCTTTGGATaGAGTCAGCAGCTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVGNLFG*SQQLFW
Trigger: CCAAAAGAGCTGCTGACTTCATCCAAAGAGGTTCCC...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CCGAAGATAGCTGTCATTCACCGCCTGGGATGGCAACGAGTGTTTGTAAGGGTCAAAGGACCTGTTGTCTaGGTACATCAAATTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PKIAVIHRLGWQRVFVRVKGPVV*VHQIPL
Trigger: AAGGGGAATTTGATGTACTCAGACAACAGGTCCTTT...GACCCTTACAAACACTCGTTGCCATCCCAGGCGGTGAATGACAGCTATCTTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGATGCTCTCTTTCCCCTaGAAGGACCTGTTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGMLSFP*KDLLSE
Trigger: CTCAGACAACAGGTCCTTTCAGGGGAAAGAGAGCAT...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGATGCTCTCTTTCCCCTaGAAGGACCTGTTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITMLSFP*KDLLSE
Trigger: CTCAGACAACAGGTCCTTTCAGGGGAAAGAGAGCAT...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGGTCTCTAGGGGAGCTTaGTTTGGTTTTCAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: YLVSAMLSTHLTRFLEWKVSRGA*FGFQVG
Trigger: ACCTACCTGAAAACCAAATCAAGCTCCCCTAGAGAC...CTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAACATGGTGAAGTGGCCTaGATAGGTGGGCATGTTGGA +
Preference number: 4 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHEHGEVA*IGGHVG
Trigger: TCCAACATGCCCACCTATTCAGGCCACTTCACCATG...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGTGGAAGATTATGGCATaGAGCCGTGTGCAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: YLVSAMLSTHLTRFLEWKWKIMA*SRVQKS
Trigger: GCTCTTTTGCACACGGCTTCATGCCATAATCTTCCA...CTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGTGGAAGATTATGGCATaGAGCCGTGTGCAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGEWKIMA*SRVQKS
Trigger: GCTCTTTTGCACACGGCTTCATGCCATAATCTTCCA...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGCATCGAAGCCGAGGGTaGGAGAAACACACATCAACA +
Preference number: 4 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGHRSRG*EKHTST
Trigger: TGTTGATGTGTGTTTCTCTCACCCTCGGCTTCGATG...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTTGGCCCAAAACAGACTaGGGTCTTCTGCAAACACTG +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIWPKTD*GLLQTL
Trigger: CAGTGTTTGCAGAAGACCTCAGTCTGTTTTGGGCCA...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTGATCAGATGTTGGGGTaGCTATTCTGGGCCCTTCGA +
Preference number: 4 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPDQMLG*LFWALR
Trigger: TCGAAGGGCCCAGAATAGTCACCCCAACATCTGATC...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATGATCAGATGTTGGGGTaGCTATTCTGGGCCCTTCGA +
Preference number: 4 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHDQMLG*LFWALR
Trigger: TCGAAGGGCCCAGAATAGTCACCCCAACATCTGATC...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGAACTATGAACAGAGGTaGGATCCCCAGAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: YLVSAMLSTHLTRFLEWKNYEQR*DPQKFS
Trigger: GGAGAACTTCTGGGGATCTCACCTCTGTTCATAGTT...CTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACAGGTTTGGAAGGCATCTaGGCCACATCTAACTATGTC +
Preference number: 4 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTGLEGI*ATSNYV
Trigger: GACATAGTTAGATGTGGCTCAGATGCCTTCCAAACC...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp CCCTTCTGCCTTTCAAAAATGAAAGGAAGCTCCTCTCACCCACTGCCTCCCTCTCTTTCTTGCAGGCAATaGCCAGCTTGTGTATTATGC +
Preference number: 4 (lower is better)
Translates to: PFCLSKMKGSSSHPLPPSLSCRQ*PACVLC
Trigger: GCATAATACACAAGCTGGTCATTGCCTGCAAGAAAG...AGAGGGAGGCAGTGGGTGAGAGGAGCTTCCTTTCATTTTTGAAAGGCAGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATCGAGAAGGTCGAGGATaGAGTGGGGCGCGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: FGLTTNHSSVFWEDFLIHREGRG*SGARCA
Trigger: CGCGCAGCGCGCCCCACTGCATCCTCGACCTTCTCG...ATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGAGGCCGTGGATGCGTaGCCCGGACATGAGGTCGCA +
Preference number: 4 (lower is better)
Translates to: TLLLILPKATFSVSLSRDEAVDA*PGHEVA
Trigger: TGCGACCTCATGTCCGGGGCACGCATCCACGGCCTC...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATATTATTCTTATTTGCAGAGGCCGTGGATGCGTaGCCCGGACATGAGGTCGCA +
Preference number: 4 (lower is better)
Translates to: LLQEFKTLGVEYILFLFAEAVDA*PGHEVA
Trigger: TGCGACCTCATGTCCGGGGCACGCATCCACGGCCTC...TGCAAATAAGAATAATATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCATGACCGTGGCTTGCTaGTGGATGGACGCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: LGDINVLVYAALNKTIEAMTVAC*WMDAPN
Trigger: GTTTGGAGCGTCCATCCAGCAGCAAGCCACGGTCAT...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTATGACCGTGGCTTGCTaGTGGATGGACGCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLMTVAC*WMDAPN
Trigger: GTTTGGAGCGTCCATCCAGCAGCAAGCCACGGTCAT...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCATGACCGTGGCTTGCTaGTGGATGGACGCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: EAVCKRANNNNNKIPPYIMTVAC*WMDAPN
Trigger: GTTTGGAGCGTCCATCCAGCAGCAAGCCACGGTCAT...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTAGCATGACCGTGGCTTaGTGCTGGATGGACGCTCCA +
Preference number: 4 (lower is better)
Translates to: PNLLHMSIALQCRCILNCSMTVA*CWMDAP
Trigger: TGGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCT...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGAGTGTGATCACATTCTaGATGTCCCAGCCCACAAAG +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGESVITF*MSQPTK
Trigger: CTTTGTGGGCTGGGACATGCAGAATGTGATCACACT...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAAAATGGGTGCAAGGTGTaGATCGGGACCTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FFLHLCWCYEVVCHQQRENGCKV*IGTSGL
Trigger: GAGGCCAGAGGTCCCGATGCACACCTTGCACCCATT...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGATATGGTTCTCCCACTTaGCCACCTTTTCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRYGSPT*PPFPIP
Trigger: GGGAATGGGAAAAGGTGGGCAAGTGGGAGAACCATA...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATGGTTCTCCCACTTaGCCACCTTTTCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITYGSPT*PPFPIP
Trigger: GGGAATGGGAAAAGGTGGGCAAGTGGGAGAACCATA...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTCTGGGCCACACGGCGTaGCTCAGGCTCAGCGTATGG +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSLGHTA*LRLSVW
Trigger: CCATACGCTGAGCCTGAGGCACGCCGTGTGGCCCAG...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTCTGGGCCACACGGCGTaGCTCAGGCTCAGCGTATGG +
Preference number: 4 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVLGHTA*LRLSVW
Trigger: CCATACGCTGAGCCTGAGGCACGCCGTGTGGCCCAG...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CCGAAGATAGCTGTCATTCACCGCCTGGGATGGCAACGAGTGTTTGTAAGGGTCTTAACTTTCTTGCCATaGTTCCCATTGGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: PKIAVIHRLGWQRVFVRVLTFLP*FPLVTR
Trigger: TCTGGTGACCAATGGGAAGCATGGCAAGAAAGTTAA...GACCCTTACAAACACTCGTTGCCATCCCAGGCGGTGAATGACAGCTATCTTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCAAGGCCAGGTCGATCTaGCTCTTCCAAGGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LGDINVLVYAALNKTIEAKARSI*LFQGEP
Trigger: AGGCTCTCCTTGGAAGAGGCAGATCGACCTGGCCTT...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATAAAGGCCAGGTCGATCTaGCTCTTCCAAGGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LYTRLLLQEFKTLGVEYIKARSI*LFQGEP
Trigger: AGGCTCTCCTTGGAAGAGGCAGATCGACCTGGCCTT...TATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTGACGACATTGAGGTTATCCTTCTaGCGGTTGGCCACAAATGTT +
Preference number: 4 (lower is better)
Translates to: PGFRGHQRKTESLFGLTTLRLSF*RLATNV
Trigger: AACATTTGTGGCCAACCGGCAGAAGGATAACCTCAA...TGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTGATTTCTTCCACAGCTaGCGGGGTCTAGAGTTCGCT +
Preference number: 4 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPDFFHS*RGLEFA
Trigger: AGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATC...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTGTGGGTCCTATTCTCTaGTGTTGCCTCATCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPVGPIL*CCLIPL
Trigger: CAGAGGGATGAGGCAACAGCAGAGAATAGGACCCAC...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGAGCCCCTCTTCATTATaGAAGGGGTTCCGGTTCATT +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGESPSSL*KGFRFI
Trigger: AATGAACCGGAACCCCTTGCATAATGAAGAGGGGCT...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCTGGAAAGGCAGCTTCTaGAGTGCGTGGAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: QQNTSLHLLPLSRALLDIWKGSF*SAWSSA
Trigger: GGCAGAACTCCACGCACTGCAGAAGCTGCCTTTCCA...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CGTTCATGTTGTCTCCAAAAATGCTCTCTTTCCCCTGAAAGGACCTGTTGTCTGAAGGGCATTGTTCTGTaGCCAGTCCTGCTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: RSCCLQKCSLSPERTCCLKGIVL*PVLLVD
Trigger: GTCTACCAGCAGGACTGGGCACAGAACAATGCCCTT...CAGACAACAGGTCCTTTCAGGGGAAAGAGAGCATTTTTGGAGACAACATGAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp CGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGAGAGACTTGCTCCTCTTaGTGTCCTCCAGACCTTGGG +
Preference number: 4 (lower is better)
Translates to: RRHKCVSLCSSEQDHRSRETCSS*CPPDLG
Trigger: CCCAAGGTCTGGAGGACAGCAAGAGGAGCAAGTCTC...TCGGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTGAGACTTGCTCCTCTTaGTGTCCTCCAGACCTTGGG +
Preference number: 4 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLETCSS*CPPDLG
Trigger: CCCAAGGTCTGGAGGACAGCAAGAGGAGCAAGTCTC...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TTGGATTCTGTGCTCACGGCCACCTCCACCGTGTTAGGGTTGGACTCATTGAGATGTACACGCGTCTATTaGTGCAGGAATTTAAAACCC +
Preference number: 4 (lower is better)
Translates to: LDSVLTATSTVLGLDSLRCTRVY*CRNLKP
Trigger: GGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACA...TCTCAATGAGTCCAACCCTAACACGGTGGAGGTGGCCGTGAGCACAGAATCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCATGGCATGAAGCCGTGTaGAAAAGAGCCAACAACAAC +
Preference number: 4 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLAWHEAV*KRANNN
Trigger: GTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCA...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTCACCTATCTGGTGTCTaGCATGCTCAGCACACACCT +
Preference number: 4 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPHLSGV*HAQHTP
Trigger: AGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTG...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTGCTCCTCTCACCCACTaGCTCCCTCTGTCTCCCTAT +
Preference number: 4 (lower is better)
Translates to: NPDLRKCHNIATILSGALAPLTH*LPLSPY
Trigger: ATAGGGAGACAGAGGGAGGCAGTGGGTGAGAGGAGC...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTCCAGGGCTGATGGCTaGGGCCGCGATTCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVSRADG*GRDSQR
Trigger: GCGCTGAGAATCGCGGCCGCAGCCATCAGCCCTGGA...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396573.6
CDS-3UTR CCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCATAAAATCCAGCATCTaGGCTACGGCCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTIKSSI*ATASWS
Trigger: GGACCAGGAGGCCGTAGCCCAGATGCTGGATTTTAT...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTAATAAAATCCAGCATCTaGGCTACGGCCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVIKSSI*ATASWS
Trigger: GGACCAGGAGGCCGTAGCCCAGATGCTGGATTTTAT...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp CATAACATAGCAACTATCTTGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTGATGGGGACGAAGGTGTaGGAGGAGATAAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: HNIATILSGALVFVAGTVMGTKV*EEIKSS
Trigger: GCTGGATTTTATCTCCTCCCACACCTTCGTCCCCAT...CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCTGGCTTGCTGCTGGATaGACGCTCCAAACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SPLASNASLLPTYPVGMSWLAAG*TLQTGR
Trigger: TCTTCCAGTTTGGAGCGTCCATCCAGCAGCAAGCCA...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GCAAACAATGACAACAGCAAAACTCTGATCCCACTTTGGGAGACAACAAGCCCTTGGCTTGCTGCTGGATaGACGCTCCAAACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: ANNDNSKTLIPLWETTSPWLAAG*TLQTGR
Trigger: TCTTCCAGTTTGGAGCGTCCATCCAGCAGCAAGCCA...AGGGCTTGTTGTCTCCCAAAGTGGGATCAGAGTTTTGCTGTTGTCATTGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR CCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTCGTAGCAGCTGGCCTTaGCCTCGGGGATGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYIRSSWP*PRGCRR
Trigger: TCTCCTACATCCCCGAGGCCAAGGCCAGCTGCTACG...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCGTGCATCGGGACCTCTaGCCTCTCCATCTGCCCGTA +
Preference number: 4 (lower is better)
Translates to: SILGIFLYTRLLLQEFKTVHRDL*PLHLPV
Trigger: TACGGGCAGATGGAGAGGCCAGAGGTCCCGATGCAC...GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAACAATCACCACCAGCCTaGGGTGCACCTGGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: FFLHLCWCYEVVCHQQREQSPPA*GAPGSL
Trigger: AAGGCTACCAGGTGCACCCCAGGCTGGTGGTGATTG...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACAAGAAGGACTTGTACCTaGGCCACACGGCGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTRRTCT*ATRRAS
Trigger: TGAGGCACGCCGTGTGGCCCAGGTACAAGTCCTTCT...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCAGTGACGATGCTGAGATaGTTGTCATCCGGCTCACAG +
Preference number: 4 (lower is better)
Translates to: DVKEDKPKTMLAFGRQMAVTMLR*LSSGSQ
Trigger: CTGTGAGCCGGATGACAACCATCTCAGCATCGTCAC...TGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCGACGAACTTCCGACATaGCACGGTGTTCCTCACACA +
Preference number: 4 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTDELPT*HGVPHT
Trigger: TGTGTGAGGAACACCGTGCCATGTCGGAAGTTCGTC...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGATGCCATGCTTCCCATTaGTCACCAGATAGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRCHASH*SPDRGR
Trigger: ACGACCTCTATCTGGTGACCAATGGGAAGCATGGCA...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGTGCCATGCTTCCCATTaGTCACCAGATAGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGCHASH*SPDRGR
Trigger: ACGACCTCTATCTGGTGACCAATGGGAAGCATGGCA...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GCTGCCGTAAAAATTTCCCTCCAGAAGCCGTTCCCTGTCCTTGAGGCTTATGCTGGGGTGCTTTCCCTTTaGCTAAGTTTCTGTTGTATC +
Preference number: 4 (lower is better)
Translates to: AAVKISLQKPFPVLEAYAGVLSL*LSFCCI
Trigger: GATACAACAGAAACTTAGCCAAAGGGAAAGCACCCC...AGCATAAGCCTCAAGGACAGGGAACGGCTTCTGGAGGGAAATTTTTACGGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTGTAAAAGAAGGCCCATaGGGTGCTTTCCCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIVKEGP*GAFPLA
Trigger: AGCCAAAGGGAAAGCACCCCATGGGCCTTCTTTTAC...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGTTCCATAACCGGTGGTaGCAAAGATGTACCCACTCC +
Preference number: 4 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQFHNRW*QRCTHS
Trigger: GGAGTGGGTACATCTTTGCCACCACCGGTTATGGAA...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAACAATTCCATAACCGGTaGTGGCAAAGATGTACCCAC +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQQFHNR*WQRCTH
Trigger: GTGGGTACATCTTTGCCACCACCGGTTATGGAATTG...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGTTGAGGAGTTCATGTTaGACATGCTGGAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: HHCGPDCPWNSTMPLTSRLRSSC*TCWKCF
Trigger: AAAACATTTCCAGCATGTCCAACATGAACTCCTCAA...CCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACATGGGATAGTGAATCCTaGCGTATGGAATCCACGGAT +
Preference number: 4 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTWDSES*RMESTD
Trigger: ATCCGTGGATTCCATACGCCAGGATTCACTATCCCA...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCATGGGATAGTGAATCCTaGCGTATGGAATCCACGGAT +
Preference number: 4 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLAWDSES*RMESTD
Trigger: ATCCGTGGATTCCATACGCCAGGATTCACTATCCCA...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CATAACATAGCAACTATCTTGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTGGGGCTCTTTAGGGAGTaGGTCCTATTCTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: HNIATILSGALVFVAGTVGLFRE*VLFSAV
Trigger: AACAGCAGAGAATAGGACCCACTCCCTAAAGAGCCC...CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGGGGCTCTTTAGGGAGTaGGTCCTATTCTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQGLFRE*VLFSAV
Trigger: AACAGCAGAGAATAGGACCCACTCCCTAAAGAGCCC...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp GCTGCCGTAAAAATTTCCCTCCAGAAGCCGTTCCCTGTCCTTGAGGCTTATGCTTCTGAAATGTCAGAGTaGGCCATCTCTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: AAVKISLQKPFPVLEAYASEMSE*AISSGR
Trigger: TCTTCCAGAAGAGATGGCCCACTCTGACATTTCAGA...AGCATAAGCCTCAAGGACAGGGAACGGCTTCTGGAGGGAAATTTTTACGGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp TGTACCTATCTGAGGACTAGTTGGGTCCTTCTCAAGTGGGGAAAACCAATTAGAGTTCCCTGTGGCACGTaGCCCGATTTGACGTTTCTG +
Preference number: 4 (lower is better)
Translates to: CTYLRTSWVLLKWGKPIRVPCGT*PDLTFL
Trigger: CAGAAACGTCAAATCGGGCCACGTGCCACAGGGAAC...TCTAATTGGTTTTCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATAGGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAGTTCCCTGTGGCACGTaGCCCGATTTGACGTTTCTG +
Preference number: 4 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQVPCGT*PDLTFL
Trigger: CAGAAACGTCAAATCGGGCCACGTGCCACAGGGAAC...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGTTGTCAGGTTCCCTGTaGCACGTGGCCCGATTTGAC +
Preference number: 4 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQLSGSL*HVARFD
Trigger: GTCAAATCGGGCCACGTGCCACAGGGAACCTGACAA...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTTTGTCAGGTTCCCTGTaGCACGTGGCCCGATTTGAC +
Preference number: 4 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLLSGSL*HVARFD
Trigger: GTCAAATCGGGCCACGTGCCACAGGGAACCTGACAA...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCGCCGGTATCGCTCGCTaGTCTCACTGTGCGGGGAAC +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFAGIAR*SHCAGN
Trigger: GTTCCCCGCACAGTGAGACCAGCGAGCGATACCGGC...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGAATAGGTGGGCATGTTaGAAAGGCAGCTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGENRWAC*KGSFCS
Trigger: ACTGCAGAAGCTGCCTTTCCAACATGCCCACCTATT...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCAGTGGCCTGAATAGGTaGGCATGTTGGAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTSGLNR*ACWKGS
Trigger: GCTGCCTTTCCAACATGCCCACCTATTCAGGCCACT...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTAGTGGCCTGAATAGGTaGGCATGTTGGAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPSGLNR*ACWKGS
Trigger: GCTGCCTTTCCAACATGCCCACCTATTCAGGCCACT...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTAGACCTGCTCCCCGGTaGCTGGGTTACCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLRPAPR*LGYLSP
Trigger: AGGAGACAGGTAACCCAGCCACCGGGGAGCAGGTCT...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AGCATAAGGCATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCATCGGAGGTGTGGTCTaGCAAGAGAGACTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SIRHNMLRNIHIIVAPTVIGGVV*QERLAP
Trigger: AGGAGCAAGTCTCTCTTGCCAGACCACACCTCCGAT...GACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTGGGTTATCGGAGGTGTaGTCTGGCAAGAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPGLSEV*SGKRDL
Trigger: CAAGTCTCTCTTGCCAGACCACACCTCCGATAACCC...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTCATCCCTGTGGGAGTaGAGGAAAGGGTTATCGGAG +
Preference number: 4 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSSSLWE*RKGLSE
Trigger: CTCCGATAACCCTTTCCTCCACTCCCACAGGGATGA...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTCTGTCATTCACCGCCTaGGATGGCAACGAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPLSFTA*DGNECL
Trigger: CAAACACTCGTTGCCATCCCAGGCGGTGAATGACAG...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCTGTCATTCACCGCCTaGGATGGCAACGAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHLSFTA*DGNECL
Trigger: CAAACACTCGTTGCCATCCCAGGCGGTGAATGACAG...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ATAAGGCATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTCTGTCATTCACCGCCTaGGATGGCAACGAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: IRHNMLRNIHIIVAPTVPLSFTA*DGNECL
Trigger: CAAACACTCGTTGCCATCCCAGGCGGTGAATGACAG...AGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGAAGGACTCACCTATCTaGTGTCTGCCATGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGKDSPI*CLPCSA
Trigger: TGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTT...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGAAGGACTCACCTATCTaGTGTCTGCCATGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQKDSPI*CLPCSA
Trigger: TGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTT...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp CATAACATAGCAACTATCTTGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTGAAGGACTCACCTATCTaGTGTCTGCCATGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HNIATILSGALVFVAGTVKDSPI*CLPCSA
Trigger: TGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTT...CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GGCATTTGGCAGCCCCCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCGAGAAAATTACATGGTaGGCTGACCTTAATGGAATT +
Preference number: 4 (lower is better)
Translates to: GIWQPPGFRGHQRKTESLEKITW*ADLNGI
Trigger: AATTCCATTAAGGTCAGCCCACCATGTAATTTTCTC...GAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGGGGGCTGCCAAATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATTTCTTTAGGGGAGCCTaGAGTTCTTGGGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHFFRGA*SSWGEP
Trigger: AGGCTCACCCCAAGAACTCCAGGCTCCCCTAAAGAA...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTTCTTTAGGGGAGCCTaGAGTTCTTGGGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTFFRGA*SSWGEP
Trigger: AGGCTCACCCCAAGAACTCCAGGCTCCCCTAAAGAA...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGGGTCCCTCGGGCCTTTaGCTCCAGATGTGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: PPTERITQKGEIACLTKLGPSGL*LQMCLG
Trigger: TCCAAGACACATCTGGAGCCAAAGGCCCGAGGGACC...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTATCCAGGCTTCTCCATaGCTGGGTCTTGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PNLLHMSIALQCRCILNCIQASP*LGLGAA
Trigger: TGCTGCCCCAAGACCCAGCCATGGAGAAGCCTGGAT...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTATCCAGGCTTCTCCATaGCTGGGTCTTGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: NPDLRKCHNIATILSGALIQASP*LGLGAA
Trigger: TGCTGCCCCAAGACCCAGCCATGGAGAAGCCTGGAT...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGAGGAGGCGATCCTTGCTaGGGTGGATTAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRGGDPC*GGLRSG
Trigger: TCCAGACCTTAATCCACCCCAGCAAGGATCGCCTCC...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTGTGAGTGTGTTCACCTaGTTAGCAGCTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPVSVFT*LAAPGS
Trigger: AGACCCAGGAGCTGCTAACCAGGTGAACACACTCAC...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAGGGGACCCTCAGGTTTaGAAGGCATCTGAGCCACAT +
Preference number: 4 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQGDPQV*KASEPH
Trigger: ATGTGGCTCAGATGCCTTCCAAACCTGAGGGTCCCC...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCCATAGTTCTCAGCAGTaGCCGCTCCTGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: EAVCKRANNNNNKIPPYIHSSQQ*PLLVIS
Trigger: GGAGATGACCAGGAGCGGCCACTGCTGAGAACTATG...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396573.6
ENST00000675398.1
3UTR CAA 72 bp ACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATaGGACATCCAACATTTACCCTCCAGAACATTGGCC +
Preference number: 4 (lower is better)
Translates to: TSLHLLPLSRAL*DIQHLPSRTLA
Trigger: GGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
3UTR CAA 72 bp TGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTaGAGTGGAAGATTATGGCATGAAGCCGTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: CLPCSAHTSQDS*SGRLWHEAVCK
Trigger: TTTGCACACGGCTTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTATAGATGCGCCCCCATaGATGCCCAAGATGGGGACG +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLIDAPP*MPKMGT
Trigger: CGTCCCCATCTTGGGCATTCATGGGGGCGCATCTAT...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR TCA 90 bp ATGGAATCCACGGATTTCTTCCACAGCTGCCGGGGTCTAGAGTTCGCTTTGGATAACAGTAGAGCAAGATaGCAGAAGAGTGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: MESTDFFHSCRGLEFALDNSRAR*QKSGSS
Trigger: AGAAGATCCACTCTTCTGTCATCTTGCTCTACTGTT...ATCCAAAGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATCCGTGGATTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCAGAAATCATACCCGGTaGGGCCAAGGGAGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFRNHTR*GQGSGP
Trigger: AGGCCCGCTCCCTTGGCCTCACCGGGTATGATTTCT...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTGAAACTCTTTTGGGATaGGCTCCGTGTTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSETLLG*APCSQR
Trigger: TCTCTGGGAACACGGAGCTCATCCCAAAAGAGTTTC...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp ATAAGGCATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGAAACTCTTTTGGGATaGGCTCCGTGTTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: IRHNMLRNIHIIVAPTVPETLLG*APCSQR
Trigger: TCTCTGGGAACACGGAGCTCATCCCAAAAGAGTTTC...AGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR TCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTGGTAGCCTTCCTCAGTaGAGGATAAGTCTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIGSLPQ*RISLCH
Trigger: ATGGCAAAGACTTATCCTTCACTGAGGAAGGCTACC...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGGGTAGCCTTCCTCAGTaGAGGATAAGTCTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITGSLPQ*RISLCH
Trigger: ATGGCAAAGACTTATCCTTCACTGAGGAAGGCTACC...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGCGAGCCAACTGCCATaGCTGCCCGTTGATAGACCA +
Preference number: 4 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFASQLP*LPVDRP
Trigger: TGGTCTATCAACGGGCAGTCATGGCAGTTGGCTCGC...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTGCGAGCCAACTGCCATaGCTGCCCGTTGATAGACCA +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYIASQLP*LPVDRP
Trigger: TGGTCTATCAACGGGCAGTCATGGCAGTTGGCTCGC...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGACAGGCACGGAGTTATTaGACACCAGGCCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRQARSY*TPGPKE
Trigger: TTCTTTGGGGCCTGGTGTTCAATAACTCCGTGCCTG...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTACGGAGCACACGCCCGTaGAACAGAAGCGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LLLILPKATFSVSLSRDVRSTRP*NRSAAS
Trigger: GGAAGCTGCGCTTCTGTTTCACGGGCGTGTGCTCCG...TACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAAGGGAACCTCTTTGGATaGAGTCAGCAGCTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHEGNLFG*SQQLFW
Trigger: CCAAAAGAGCTGCTGACTTCATCCAAAGAGGTTCCC...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTGGGAACCTCTTTGGATaGAGTCAGCAGCTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPGNLFG*SQQLFW
Trigger: CCAAAAGAGCTGCTGACTTCATCCAAAGAGGTTCCC...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCCAAATTCCCCTTATCTaGAACCATGTCCATGATGAG +
Preference number: 4 (lower is better)
Translates to: SEIYTSLWPRLSLEQYDAQIPLI*NHVHDE
Trigger: CTCATCATGGACATGGTTTCAGATAAGGGGAATTTG...GGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR TCA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCAATGCTCTCTTTCCCCTaGAAGGACCTGTTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: EPNFLISCTCQSHYSADAMLSFP*KDLLSE
Trigger: CTCAGACAACAGGTCCTTTCAGGGGAAAGAGAGCAT...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAACCTTGTCTTTCAAGGTaGAGTGCTTGGAGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQPCLSR*SAWSRV
Trigger: AACTCTACTCCAAGCACTTCACCTTGAAAGACAAGG...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCCATGGTGAAGTGGCCTaGATAGGTGGGCATGTTGGA +
Preference number: 4 (lower is better)
Translates to: EAVCKRANNNNNKIPPYIHGEVA*IGGHVG
Trigger: TCCAACATGCCCACCTATTCAGGCCACTTCACCATG...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAGGGTTACCTGTCTCCTaGAGCATCTGGTCTTCATCG +
Preference number: 4 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQGLPVS*SIWSSS
Trigger: CGATGAAGACCAGATGCTTCAGGAGACAGGTAACCC...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATCCCCGAGAGTTTGCTTaGGGGGACACTAAACAGGCT +
Preference number: 4 (lower is better)
Translates to: FSYISVGAMKWFATNRENPREFA*GDTKQA
Trigger: AGCCTGTTTAGTGTCCCCTCAAGCAAACTCTCGGGG...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTACAGTACGATGCCGTTaGCCTCAAGGACGACCGAAG +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSTVRCR*PQGRPK
Trigger: CTTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGT...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGTTATGGTCATCGAAGCCGAGGGTaGGAGAAACACACATCAACA +
Preference number: 4 (lower is better)
Translates to: YTANWTPPWLFGNGTSYGHRSRG*EKHTST
Trigger: TGTTGATGTGTGTTTCTCTCACCCTCGGCTTCGATG...ACCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTCATCGAAGCCGAGGGTaGGAGAAACACACATCAACA +
Preference number: 4 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSHRSRG*EKHTST
Trigger: TGTTGATGTGTGTTTCTCTCACCCTCGGCTTCGATG...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTTCTCTGTTGGTGCTATaGAGTGGTTTGCCACCAACA +
Preference number: 4 (lower is better)
Translates to: NASLLPTYPVGMSRRLALSLLVL*SGLPPT
Trigger: TGTTGGTGGCAAACCACTTCATAGCACCAACAGAGA...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTTGGCCCAAAACAGACTaGGGTCTTCTGCAAACACTG +
Preference number: 4 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPWPKTD*GLLQTL
Trigger: CAGTGTTTGCAGAAGACCTCAGTCTGTTTTGGGCCA...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CATAACATAGCAACTATCTTGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTGTATGGATGCCAGCTCTaGCTTAAGCCAGCTGAAACT +
Preference number: 4 (lower is better)
Translates to: HNIATILSGALVFVAGTVYGCQL*LKPAET
Trigger: AGTTTCAGCTGGCTTAAGTCAGAGCTGGCATCCATA...CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTTCAAGTGTACCTATCTaGGGACTAGTTGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKISSVPI*GLVGSF
Trigger: GAAGGACCCAACTAGTCCTCAGATAGGTACACTTGA...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGTCAAGTGTACCTATCTaGGGACTAGTTGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGSSVPI*GLVGSF
Trigger: GAAGGACCCAACTAGTCCTCAGATAGGTACACTTGA...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp TTGCCCACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGGGCTGGGAGGAGGCATaGTTTGGCAAGGACTGGAGA +
Preference number: 4 (lower is better)
Translates to: LPTCKKIILTKQNAHHEEGWEEA*FGKDWR
Trigger: TCTCCAGTCCTTGCCAAATCATGCCTCCTCCCAGCC...CTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGTGGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp GATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCACCCTCTATGCTTCCCTaGTACATTCATACCCTGGTG +
Preference number: 4 (lower is better)
Translates to: DVKEDKPKTMLAFGRQMAPSMLP*YIHTLV
Trigger: CACCAGGGTATGAATGTATCAGGGAAGCATAGAGGG...TGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTCGCCATCCTTCCTaGAATACACCTCTATTCCTT +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIPRHPS*NTPLFL
Trigger: AAGGAATAGAGGTGTATTTCAGGAAGGATGGCGAGG...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp CGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGATCCCTGTCCCACCTCTaGAACTCATTCCATCTGCCT +
Preference number: 4 (lower is better)
Translates to: RRHKCVSLCSSEQDHRSRSLSHL*NSFHLP
Trigger: AGGCAGATGGAATGAGTTTCAGAGGTGGGACAGGGA...TCGGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTTCCCTGTCCCACCTCTaGAACTCATTCCATCTGCCT +
Preference number: 4 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLSLSHL*NSFHLP
Trigger: AGGCAGATGGAATGAGTTTCAGAGGTGGGACAGGGA...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp TTGCATGTGCGTGCTATTACCCATGGACAGAGACCCAACCGTTTGCATTCAAGTCATTTTTACACCATATaGCCGGGCACTTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: LHVRAITHGQRPNRLHSSHFYTI*PGTSVA
Trigger: GGCAACAGAAGTGCCCGGTCATATGGTGTAAAAATG...ACTTGAATGCAAACGGTTGGGTCTCTGTCCATGGGTAATAGCACGCACATGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATGTCATCCCTGTCTCCTaGAGCATCTGGTCTTCATCG +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHVIPVS*SIWSSS
Trigger: CGATGAAGACCAGATGCTTCAGGAGACAGGGATGAC...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535259.6
ENST00000562109.5
CDS-3UTR GCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTAGCATGACCGTGGCTTaGTGCTGGATGGACGCTCCA +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYISMTVA*CWMDAP
Trigger: TGGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCT...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AGCATAAGGCATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCTATGGTTCTCCCACTTaGCCACCTTTTCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: SIRHNMLRNIHIIVAPTVYGSPT*PPFPIP
Trigger: GGGAATGGGAAAAGGTGGGCAAGTGGGAGAACCATA...GACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp TTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATAGCCAACTGCCATGACTaGCCGTTGATAGACCACTTC +
Preference number: 4 (lower is better)
Translates to: LYTRLLLQEFKTLGVEYIANCHD*PLIDHF
Trigger: GAAGTGGTCTATCAACGGGCAGTCATGGCAGTTGGC...TATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATGGTGAGCGAGCCAACTaGCATGACTGCCCGTTGATA +
Preference number: 4 (lower is better)
Translates to: FSYISVGAMKWFATNRENGERAN*HDCPLI
Trigger: TATCAACGGGCAGTCATGGCAGTTGGCTCGCTCACC...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp ACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCGGTGAGCGAGCCAACTaGCATGACTGCCCGTTGATA +
Preference number: 4 (lower is better)
Translates to: TEFLDVKEDKPKTMLAFGGERAN*HDCPLI
Trigger: TATCAACGGGCAGTCATGGCAGTTGGCTCGCTCACC...GCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTCAGAAGGTGAGACGGTaGCATTACTTCTTGAAACCA +
Preference number: 4 (lower is better)
Translates to: GIQCIIIANIPSRHVPETQKVRR*HYFLKP
Trigger: TGGTTTCAAGAAGTAATGGCACCGTCTCACCTTCTG...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp ACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAAGGCCAGGTCGATCTaGCTCTTCCAAGGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: TEFLDVKEDKPKTMLAFGKARSI*LFQGEP
Trigger: AGGCTCTCCTTGGAAGAGGCAGATCGACCTGGCCTT...GCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCATTGTACTTCTTACAGTGTGCACTCCATGAATaGAGCTGTAGATGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KPKTMLAFGRQMALYFLQCALHE*SCRCPC
Trigger: GCAGGGGCATCTACAGCTGCATTCATGGAGTGCACA...CTGTAAGAAGTACAATGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGGAGTTTTAACATGTTaGTCTGGGATCCCGTCAGAT +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQGVLTC*SGIPSD
Trigger: ATCTGACGGGATCCCAGAGCAACATGTTAAAACTCC...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAATTGAGGTTATCCTTCTaGCGGTTGGCCACAAATGTT +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQLRLSF*RLATNV
Trigger: AACATTTGTGGCCAACCGGCAGAAGGATAACCTCAA...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGATTTCTTCCACAGCTaGCGGGGTCTAGAGTTCGCT +
Preference number: 4 (lower is better)
Translates to: LGDINVLVYAALNKTIEADFFHS*RGLEFA
Trigger: AGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATC...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATAGATTTCTTCCACAGCTaGCGGGGTCTAGAGTTCGCT +
Preference number: 4 (lower is better)
Translates to: LYTRLLLQEFKTLGVEYIDFFHS*RGLEFA
Trigger: AGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATC...TATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGGATTTCTTCCACAGCTaGCGGGGTCTAGAGTTCGCT +
Preference number: 4 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQDFFHS*RGLEFA
Trigger: AGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATC...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGAGCCCCTCTTCATTATaGAAGGGGTTCCGGTTCATT +
Preference number: 4 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGSPSSL*KGFRFI
Trigger: AATGAACCGGAACCCCTTGCATAATGAAGAGGGGCT...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGAAGCCCCTCTTCATTATaGAAGGGGTTCCGGTTCATT +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRSPSSL*KGFRFI
Trigger: AATGAACCGGAACCCCTTGCATAATGAAGAGGGGCT...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTTGGAAAGGCAGCTTCTaGAGTGCGTGGAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: NPDLRKCHNIATILSGALWKGSF*SAWSSA
Trigger: GGCAGAACTCCACGCACTGCAGAAGCTGCCTTTCCA...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACAGAGACTTGCTCCTCTTaGTGTCCTCCAGACCTTGGG +
Preference number: 4 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTETCSS*CPPDLG
Trigger: CCCAAGGTCTGGAGGACAGCAAGAGGAGCAAGTCTC...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TTGGCTGACCGGAGGAGTTTTAACATGTTGCTCTGGGATCCCGTCAGATTGAAGACACGCGTCTATTGCTaGAGGAATTTAAAACCCTGG +
Preference number: 4 (lower is better)
Translates to: LADRRSFNMLLWDPVRLKTRVYC*RNLKPW
Trigger: CCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGT...CTTCAATCTGACGGGATCCCAGAGCAACATGTTAAAACTCCTCCGGTCAGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACATCTGGTGTCTGCCATaGTCAGCACACACCTCACAA +
Preference number: 4 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHIWCLP*SAHTSQ
Trigger: TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGAT...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACACCAGAAGGGAGGAAATaGAAACTTACGTACATAGGC +
Preference number: 4 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTPEGRK*KLTYIG
Trigger: GCCTATGTACGTAAGTTTGCATTTCCTCCCTTCTGG...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CCCTTCTGCCTTTCAAAAATGAAAGGAAGCTCCTCTCACCCACTGCCTCCCTCTCTAGTCAGCCCCTTCTaGCTTTCAAAAATGAAAGGA +
Preference number: 4 (lower is better)
Translates to: PFCLSKMKGSSSHPLPPSLVSPF*LSKMKG
Trigger: TCCTTTCATTTTTGAAAGGCAGAAGGGGCTGACTAG...AGAGGGAGGCAGTGGGTGAGAGGAGCTTCCTTTCATTTTTGAAAGGCAGAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp ATACGGCTGTTGGTGCATGTCACCACATTAACAACTCTGGGAAGAGCGATACACTTGGTTGCATGTGCGTaGTATTACCCATGGACAGAG +
Preference number: 4 (lower is better)
Translates to: IRLLVHVTTLTTLGRAIHLVACA*YYPWTE
Trigger: CTCTGTCCATGGGTAATAGCACGCACATGCAACCAA...GTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACATGCACCAACAGCCGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACAGGAAAGGCAGTGTGTaGTCAGGGGCATGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYRKGSV*SGACLQ
Trigger: CTGCAGGCATGCCCCTGAGCACACACTGCCTTTCCT...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGCCCTGGAGAGTTGCATaGTTTGAAATACAACCCCCA +
Preference number: 4 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVPWRVA*FEIQPP
Trigger: TGGGGGTTGTATTTCAAAGCATGCAACTCTCCAGGG...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATCCACGAGAAGCTAACTaGGCACCTCCACCCGCACCC +
Preference number: 4 (lower is better)
Translates to: TLLLILPKATFSVSLSRDPREAN*APPPAP
Trigger: GGGTGCGGGTGGAGGTGCCCAGTTAGCTTCTCGTGG...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS-3UTR CCA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACATGGACGCTCCAAACTaGAAGAAGGTAGACGTCGGA +
Preference number: 4 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHMDAPN*KKVDVG
Trigger: TCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCAT...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATTGGCTTGCTGCTGGATaGACGCTCCAAACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RALLDIQHLPSRTLAITYWLAAG*TLQTGR
Trigger: TCTTCCAGTTTGGAGCGTCCATCCAGCAGCAAGCCA...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCAAGATGACAGAAGAGTaGATCTTCTTCAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SEIYTSLWPRLSLEQYDAKMTEE*IFFSWT
Trigger: AGTCCAGCTGAAGAAGATCCACTCTTCTGTCATCTT...GGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTCGATGGAAACTCTTTTaGGATGAGCTCCGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPRWKLF*DELRVP
Trigger: GGGAACACGGAGCTCATCCCAAAAGAGTTTCCATCG...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GCAAACAATGACAACAGCAAAACTCTGATCCCACTTTGGGAGACAACAAGCCCTCGATGGAAACTCTTTTaGGATGAGCTCCGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: ANNDNSKTLIPLWETTSPRWKLF*DELRVP
Trigger: GGGAACACGGAGCTCATCCCAAAAGAGTTTCCATCG...AGGGCTTGTTGTCTCCCAAAGTGGGATCAGAGTTTTGCTGTTGTCATTGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR CCA 90 bp TCTGCATTTTCAGTGCGTATTTCCAACAATGAGTATGTAAGCAAGCAAACAATGTCTGCCCGTAGCAGCTaGCCTTGGCCTCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: SAFSVRISNNEYVSKQTMSARSS*PWPRGC
Trigger: ACATCCCCGAGGCCAAGGCCAGCTGCTACGGGCAGA...CATTGTTTGCTTGCTTACATACTCATTGTTGGAAATACGCACTGAAAATGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR CCA 90 bp TTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATATTATTCTTATTTGCATCTGCCCGTAGCAGCTaGCCTTGGCCTCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: LLQEFKTLGVEYILFLFASARSS*PWPRGC
Trigger: ACATCCCCGAGGCCAAGGCCAGCTGCTACGGGCAGA...TGCAAATAAGAATAATATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCCAATCACCACCAGCCTaGGGTGCACCTGGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFQSPPA*GAPGSL
Trigger: AAGGCTACCAGGTGCACCCCAGGCTGGTGGTGATTG...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACAGAAGGACTTGTACCTaGGCCACACGGCGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYRRTCT*ATRRAS
Trigger: TGAGGCACGCCGTGTGGCCCAGGTACAAGTCCTTCT...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TGTACCTATCTGAGGACTAGTTGGGTCCTTCTCAAGTGGGGAAAACCAATTAGAGTGACGATGCTGAGATaGTTGTCATCCGGCTCACAG +
Preference number: 4 (lower is better)
Translates to: CTYLRTSWVLLKWGKPIRVTMLR*LSSGSQ
Trigger: CTGTGAGCCGGATGACAACCATCTCAGCATCGTCAC...TCTAATTGGTTTTCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATAGGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATGTAAAAGAAGGCCCATaGGGTGCTTTCCCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHVKEGP*GAFPLA
Trigger: AGCCAAAGGGAAAGCACCCCATGGGCCTTCTTTTAC...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCAGTAAAAGAAGGCCCATaGGGTGCTTTCCCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: DVKEDKPKTMLAFGRQMAVKEGP*GAFPLA
Trigger: AGCCAAAGGGAAAGCACCCCATGGGCCTTCTTTTAC...TGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ATGGAATCCACGGATTTCTTCCACAGCTGCCGGGGTCTAGAGTTCGCTTTGGATTTTAACATGTTGCTCTaGGATCCCGTCAGATTGAAG +
Preference number: 4 (lower is better)
Translates to: MESTDFFHSCRGLEFALDFNMLL*DPVRLK
Trigger: CTTCAATCTGACGGGATCCCAGAGCAACATGTTAAA...ATCCAAAGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATCCGTGGATTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCAATGAGGGAACCTCTTTaGATGAAGTCAGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLAMREPL*MKSAAL
Trigger: AAGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCAT...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTGTGAATCCTGGCGTATaGAATCCACGGATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NASLLPTYPVGMSRRLALVNPGV*NPRISS
Trigger: GGAAGAAATCCGTGGATTCCATACGCCAGGATTCAC...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGTGGGATAGTGAATCCTaGCGTATGGAATCCACGGAT +
Preference number: 4 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMWDSES*RMESTD
Trigger: ATCCGTGGATTCCATACGCCAGGATTCACTATCCCA...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATGGGAGACTGGATTCTaGGATAGTGAATCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVWETGF*DSESWR
Trigger: ACGCCAGGATTCACTATCCCAGAATCCAGTCTCCCA...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAAGGGCTCTTTAGGGAGTaGGTCCTATTCTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHEGLFRE*VLFSAV
Trigger: AACAGCAGAGAATAGGACCCACTCCCTAAAGAGCCC...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCAGTGGGCCATCTCTTCTaGAAGATACCTAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: EPNFLISCTCQSHYSADAVGHLF*KIPRAL
Trigger: AAGAGCCCTAGGTATCTTCCAGAAGAGATGGCCCAC...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGTCTGAAATGTCAGAGTaGGCCATCTCTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGESEMSE*AISSGR
Trigger: TCTTCCAGAAGAGATGGCCCACTCTGACATTTCAGA...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACAGTTCCCTGTGGCACGTaGCCCGATTTGACGTTTCTG +
Preference number: 4 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTVPCGT*PDLTFL
Trigger: CAGAAACGTCAAATCGGGCCACGTGCCACAGGGAAC...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAGTTCCCTGTGGCACGTaGCCCGATTTGACGTTTCTG +
Preference number: 4 (lower is better)
Translates to: NIRFDTRHFLVHASIAAGVPCGT*PDLTFL
Trigger: CAGAAACGTCAAATCGGGCCACGTGCCACAGGGAAC...TCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATTGTCAGGTTCCCTGTaGCACGTGGCCCGATTTGAC +
Preference number: 4 (lower is better)
Translates to: FFLHLCWCYEVVCHQQRELSGSL*HVARFD
Trigger: GTCAAATCGGGCCACGTGCCACAGGGAACCTGACAA...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATCCTCACTACAGTCCTTaGGGTATTTGGAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHPHYSP*GIWRPL
Trigger: CAGTGGCCTCCAAATACCCCAAGGACTGTAGTGAGG...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTGGTTCATTGGCAGCGTaGAGTCCCCCTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLGSLAA*SPPCGS
Trigger: ACTTCCGCAAGGGGGACTCCACGCTGCCAATGAACC...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGAATAGGTGGGCATGTTaGAAAGGCAGCTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITNRWAC*KGSFCS
Trigger: ACTGCAGAAGCTGCCTTTCCAACATGCCCACCTATT...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATAGTGGCCTGAATAGGTaGGCATGTTGGAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHSGLNR*ACWKGS
Trigger: GCTGCCTTTCCAACATGCCCACCTATTCAGGCCACT...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCCTGTCCTCCAGACCTTaGGGGAAAAGGGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTLSSRP*GKRELF
Trigger: AAAAAGCTCCCTTTTCCCCCAAGGTCTGGAGGACAG...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAGGGTTATCGGAGGTGTaGTCTGGCAAGAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQGLSEV*SGKRDL
Trigger: CAAGTCTCTCTTGCCAGACCACACCTCCGATAACCC...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCAATAACCAAGCGTTaGTCATCCCTGTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLPITKR*SSLWEW
Trigger: CCACTCCCACAGGGATGACCAACGCTTGGTTATTGG...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCAATATACACATCATTGTaGCCCCGACTGTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMAIYTSL*PRLSLE
Trigger: TTCCAGGGACAGTCGGGGCCACAATGATGTGTATAT...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGATATACACATCATTGTaGCCCCGACTGTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMIYTSL*PRLSLE
Trigger: TTCCAGGGACAGTCGGGGCCACAATGATGTGTATAT...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGATATACACATCATTGTaGCCCCGACTGTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQIYTSL*PRLSLE
Trigger: TTCCAGGGACAGTCGGGGCCACAATGATGTGTATAT...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGAATATACACATCATTGTaGCCCCGACTGTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRIYTSL*PRLSLE
Trigger: TTCCAGGGACAGTCGGGGCCACAATGATGTGTATAT...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TATGGAATCCACGGATTTCTTCCACAGCTGCCGGGGTCTAGAGTTCGCTTTGGATTAGCAGGGCACTATTaGACATCCAACATTTACCCT +
Preference number: 4 (lower is better)
Translates to: YGIHGFLPQLPGSRVRFGLAGHY*TSNIYP
Trigger: AGGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAA...TCCAAAGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATCCGTGGATTCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTGACGACATTGAGTGGAAGATTATaGCATGAAGCCGTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: PGFRGHQRKTESLFGLTTLSGRL*HEAVCK
Trigger: TTTGCACACGGCTTCATGCCATAATCTTCCACTCAA...TGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATTCTTTAGGGGAGCCTaGAGTTCTTGGGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRFFRGA*SSWGEP
Trigger: AGGCTCACCCCAAGAACTCCAGGCTCCCCTAAAGAA...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GAAGAGCGATACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGCGATACACAGCTAATTaGACACCACCATGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: EERYTANWTPPWLFGNGTRYTAN*TPPWLF
Trigger: AAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCG...CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGCCTTCGGCAGACAGATaGCATTGTACTTCTTACAGA +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGEPSADR*HCTSYR
Trigger: TCTGTAAGAAGTACAATGCCATCTGTCTGCCGAAGG...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGAGGAAACCAGGAAATaGCCAGGCGAGTCTACATTA +
Preference number: 4 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMEETRK*PGESTL
Trigger: TAATGTAGACTCGCCTGGCCATTTCCTGGTTTCCTC...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CATAACATAGCAACTATCTTGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTGTTTAGGATCAGATGTTaGGGTGACTATTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: HNIATILSGALVFVAGTVFRIRC*GDYSGP
Trigger: GGGCCCAGAATAGTCACCCCAACATCTGATCCTAAA...CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTACGATCCTTGCTGGGGTaGATTAAGGTCTGGAATGCA +
Preference number: 4 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVRSLLG*IKVWNA
Trigger: TGCATTCCAGACCTTAATCCACCCCAGCAAGGATCG...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATCGATCCTTGCTGGGGTaGATTAAGGTCTGGAATGCA +
Preference number: 4 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHRSLLG*IKVWNA
Trigger: TGCATTCCAGACCTTAATCCACCCCAGCAAGGATCG...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGGACAGAAAGCCTCTTTaGCTTGACGACAAATCACTC +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGEDRKPL*LDDKSL
Trigger: GAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCTGTC...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTAAACTCTCACTCTCCCTaGAGGTCTCTGTGGCATTTG +
Preference number: 4 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVNSHSP*RSLWHL
Trigger: CAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTT...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTTATCTGAGGACTAGTTaGGTCCTTCTCAAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: NASLLPTYPVGMSRRLALYLRTS*VLLKWG
Trigger: TCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATA...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGTTATGGTGCGTGCTATTACCCATaGACAGAGACCCAACCGTTT +
Preference number: 4 (lower is better)
Translates to: YTANWTPPWLFGNGTSYGACYYP*TETQPF
Trigger: AAACGGTTGGGTCTCTGTCCATGGGTAATAGCACGC...ACCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGATGGGTAGGTCTTTCTaGGGCAAGTGGCAAAAACAA +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGEMGRSF*GKWQKQ
Trigger: TTGTTTTTGCCACTTGCCCCAGAAAGACCTACCCAT...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGACTGGAGAACTGGTTaGAACCAGACAAAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMDWRTG*NQTKAF
Trigger: GAAGGCTTTTGTCTGGTTCCAACCAGTTCTCCAGTC...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGAATTCCAAGGAGAACATaGTCACGCACTTGTAGACCC +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRIPRRT*SRTCRP
Trigger: GGGTCTACAAGTGCGTGACCATGTTCTCCTTGGAAT...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGCCAATAACCAAGCGTTaGTCATCCCTGTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGPITKR*SSLSPE
Trigger: TTCAGGAGACAGGGATGACCAACGCTTGGTTATTGG...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535259.6
CDS-3UTR CCA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGCGTCGGATCCTTGTTTaGGGACACCTTTTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGRRILV*GHLFRG
Trigger: TCCTCTAAAAAGGTGTCCCCAAACAAGGATCCGACG...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674742.1
CDS-3UTR TCA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCCTCACTCAGAATaGGAACAGCCTCGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RANNNNNKIPPYIFFLLAGPHSE*EQPRLW
Trigger: CCAAAGACGAGGCTGTTCTCATTCTGAGTGAGGCCC...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAGGGCCTCACTCAGAATaGGAACAGCCTCGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSGPHSE*EQPRLW
Trigger: CCAAAGACGAGGCTGTTCTCATTCTGAGTGAGGCCC...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TCTGCATTTTCAGTGCGTATTTCCAACAATGAGTATGTAAGCAAGCAAACAATGAGAAATCATACCCGGTaGGGCCAAGGGAGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: SAFSVRISNNEYVSKQTMRNHTR*GQGSGP
Trigger: AGGCCCGCTCCCTTGGCCTCACCGGGTATGATTTCT...CATTGTTTGCTTGCTTACATACTCATTGTTGGAAATACGCACTGAAAATGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR TCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATAGAAATCATACCCGGTaGGGCCAAGGGAGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: TLLLILPKATFSVSLSRDRNHTR*GQGSGP
Trigger: AGGCCCGCTCCCTTGGCCTCACCGGGTATGATTTCT...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATGAAACTCTTTTGGGATaGGCTCCGTGTTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RALLDIQHLPSRTLAITYETLLG*APCSQR
Trigger: TCTCTGGGAACACGGAGCTCATCCCAAAAGAGTTTC...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCACTATGTCTTCCACGATaGCGAATGGGGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RANNNNNKIPPYIFFLLALCLPR*RMGPPP
Trigger: TGGAGGAGGCCCCATTCGTCATCGTGGAAGACATAG...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGGTGCCATTACTTCTTaGAACCATGACACTGATTCC +
Preference number: 4 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMGAITS*NHDTDS
Trigger: GGAATCAGTGTCATGGTTTCAAGAAGTAATGGCACC...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGGGTGCCATTACTTCTTaGAACCATGACACTGATTCC +
Preference number: 4 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVGAITS*NHDTDS
Trigger: GGAATCAGTGTCATGGTTTCAAGAAGTAATGGCACC...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTCCCAGACAGAGGCGCTaGATGGTTCTAGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLPRQRR*MVLEKQ
Trigger: CTGCTTTTCTAGAACCATTCAGCGCCTCTGTCTGGG...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGCAGGCACGGAGTTATTaGACACCAGGCCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: PPTERITQKGEIACLTKLQARSY*TPGPKE
Trigger: TTCTTTGGGGCCTGGTGTTCAATAACTCCGTGCCTG...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACACAGGCACGGAGTTATTaGACACCAGGCCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTQARSY*TPGPKE
Trigger: TTCTTTGGGGCCTGGTGTTCAATAACTCCGTGCCTG...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGCCCATACAGATACCATaGTCTTGCTGGTGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQPIQIP*SCWWSL
Trigger: AAGGGACCACCAGCAAGATCATGGTATCTGTATGGG...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGACCCATACAGATACCATaGTCTTGCTGGTGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRPIQIP*SCWWSL
Trigger: AAGGGACCACCAGCAAGATCATGGTATCTGTATGGG...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAGAAACTTTTTGTCACTaGGGCCGGTCACTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQETFCH*GRSLGP
Trigger: TGGACCAAGTGACCGGCCTCAGTGACAAAAAGTTTC...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTGCCCACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGTGTAGATGCCCCTGCTaGTGGAGAAGAGCAACCCAG +
Preference number: 4 (lower is better)
Translates to: LPTCKKIILTKQNAHHEECRCPC*WRRATQ
Trigger: CTGGGTTGCTCTTCTCCATCAGCAGGGGCATCTACA...CTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGTGGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATAGGGAACCTCTTTGGATaGAGTCAGCAGCTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: LYTRLLLQEFKTLGVEYIGNLFG*SQQLFW
Trigger: CCAAAAGAGCTGCTGACTTCATCCAAAGAGGTTCCC...TATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR TCA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTCAAATTCCCCTTATCTaGAACCATGTCCATGATGAG +
Preference number: 4 (lower is better)
Translates to: GIQCIIIANIPSRHVPETQIPLI*NHVHDE
Trigger: CTCATCATGGACATGGTTTCAGATAAGGGGAATTTG...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp GAAGAGCGATACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGGGAATACATAGTTATTaGGGTTATCCTTCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: EERYTANWTPPWLFGNGTGIHSY*GYPSAG
Trigger: ACCGGCAGAAGGATAACCTCAATAACTATGTATTCC...CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCAGTATTTGGAGGCCACTaGCCTTTTAAAGTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLAVFGGH*PFKVVL
Trigger: AAGGACAACTTTAAAAGGTCAGTGGCCTCCAAATAC...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATGTCTCTAGGGGAGCTTaGTTTGGTTTTCAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHVSRGA*FGFQVG
Trigger: ACCTACCTGAAAACCAAATCAAGCTCCCCTAGAGAC...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTCATGGTGAAGTGGCCTaGATAGGTGGGCATGTTGGA +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSHGEVA*IGGHVG
Trigger: TCCAACATGCCCACCTATTCAGGCCACTTCACCATG...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTGGGTTACCTGTCTCCTaGAGCATCTGGTCTTCATCG +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLGLPVS*SIWSSS
Trigger: CGATGAAGACCAGATGCTTCAGGAGACAGGTAACCC...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TTGCCCACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGCCCCGAGAGTTTGCTTaGGGGGACACTAAACAGGCT +
Preference number: 4 (lower is better)
Translates to: LPTCKKIILTKQNAHHEEPREFA*GDTKQA
Trigger: AGCCTGTTTAGTGTCCCCTCAAGCAAACTCTCGGGG...CTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGTGGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR TCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTACAGTACGATGCCGTTaGCCTCAAGGACGACCGAAG +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYITVRCR*PQGRPK
Trigger: CTTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGT...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAAGATACTATACAACCCTaGGTCATCACCAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHEDTIQP*VITRRE
Trigger: CTCCCTTCTGGTGATGACTCAGGGTTGTATAGTATC...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTGATACTATACAACCCTaGGTCATCACCAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPDTIQP*VITRRE
Trigger: CTCCCTTCTGGTGATGACTCAGGGTTGTATAGTATC...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CATAACATAGCAACTATCTTGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTGAGTTTGGGGTGGAAGTaGGTGTCCAACAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: HNIATILSGALVFVAGTVSLGWK*VSNRIS
Trigger: AGAAATTCTGTTGGACACTCACTTCCACCCCAAACT...CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATTCTCTGTTGGTGCTATaGAGTGGTTTGCCACCAACA +
Preference number: 4 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHSLLVL*SGLPPT
Trigger: TGTTGGTGGCAAACCACTTCATAGCACCAACAGAGA...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTGATCAGATGTTGGGGTaGCTATTCTGGGCCCTTCGA +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLDQMLG*LFWALR
Trigger: TCGAAGGGCCCAGAATAGTCACCCCAACATCTGATC...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp ACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCGATCAGATGTTGGGGTaGCTATTCTGGGCCCTTCGA +
Preference number: 4 (lower is better)
Translates to: TEFLDVKEDKPKTMLAFGDQMLG*LFWALR
Trigger: TCGAAGGGCCCAGAATAGTCACCCCAACATCTGATC...GCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGTCACAACATTACTGTTaGTTCTTCCAAAGGCCACGT +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGESQHYC*FFQRPR
Trigger: ACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGA...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAGCCAGCTCAGAGCATTaGAACCATAAGTGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQASSEH*NHKWPK
Trigger: CTTAGGCCACTTATGGTTTCAATGCTCTGAGCTGGC...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTCCCTGTCACAGAGGCTaGTACTCAAGGGTATATGCC +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLPCHRG*YSRVYA
Trigger: GGCATATACCCTTGAGTATCAGCCTCTGTGACAGGG...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACGGTTTGGAAGGCATCTaGGCCACATCTAACTATGTC +
Preference number: 4 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHGLEGI*ATSNYV
Trigger: GACATAGTTAGATGTGGCTCAGATGCCTTCCAAACC...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGGTCATCCCTGTCTCCTaGAGCATCTGGTCTTCATCG +
Preference number: 4 (lower is better)
Translates to: PPTERITQKGEIACLTKLVIPVS*SIWSSS
Trigger: CGATGAAGACCAGATGCTTCAGGAGACAGGGATGAC...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535259.6
CDS-3UTR GCA 90 bp ACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCCTATAGAATGCGCCCCCATGAATaGCCAAGATGGGGACGAAGG +
Preference number: 4 (lower is better)
Translates to: TSNIYPPEHWPLRIFPYRMRPHE*PRWGRR
Trigger: CCTTCGTCCCCATCTTGGGCATTCATGGGGGCGCAT...TCTATAGGGAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCAGCCATGATCATAGATaGGCCCCCATGAATGCCCAA +
Preference number: 4 (lower is better)
Translates to: QQNTSLHLLPLSRALLDISHDHR*APMNAQ
Trigger: TTGGGCATTCATGGGGGCGCATCTATGATCATGGCT...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCAGCCATGATCATAGATaGGCCCCCATGAATGCCCAA +
Preference number: 4 (lower is better)
Translates to: EAVCKRANNNNNKIPPYISHDHR*APMNAQ
Trigger: TTGGGCATTCATGGGGGCGCATCTATGATCATGGCT...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCAGTGTGATCACATTCTaGATGTCCCAGCCCACAAAG +
Preference number: 4 (lower is better)
Translates to: SPLASNASLLPTYPVGMSSVITF*MSQPTK
Trigger: CTTTGTGGGCTGGGACATGCAGAATGTGATCACACT...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTTGGTTAGGATGCCAATaGCGTCCCTCACTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLWLGCQ*RPSLSP
Trigger: AGGCGAGAGTGAGGGACGGCATTGGCATCCTAACCA...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAATATGGTTCTCCCACTTaGCCACCTTTTCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQYGSPT*PPFPIP
Trigger: GGGAATGGGAAAAGGTGGGCAAGTGGGAGAACCATA...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGCAATGCAGAACCCCTTaGAGCATTTCTTCACATTCA +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGEQCRTP*SISSHS
Trigger: TGAATGTGAAGAAATGCTGCAAGGGGTTCTGCATTG...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACAAGGCCAGGTCGATCTaGCTCTTCCAAGGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYKARSI*LFQGEP
Trigger: AGGCTCTCCTTGGAAGAGGCAGATCGACCTGGCCTT...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGATGTGCACTCCATGAATaGAGCTGTAGATGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: NIRFDTRHFLVHASIAAGCALHE*SCRCPC
Trigger: GCAGGGGCATCTACAGCTGCATTCATGGAGTGCACA...TCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535259.6
ENST00000562109.5
CDS-3UTR GCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTTTGAGGTTATCCTTCTaGCGGTTGGCCACAAATGTT +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKILRLSF*RLATNV
Trigger: AACATTTGTGGCCAACCGGCAGAAGGATAACCTCAA...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTGATTTCTTCCACAGCTaGCGGGGTCTAGAGTTCGCT +
Preference number: 4 (lower is better)
Translates to: PNLLHMSIALQCRCILNCDFFHS*RGLEFA
Trigger: AGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATC...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATACAGTGCGTGGAGTTCTaGCGGTATCGCTCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGIQCVEF*RYRSLV
Trigger: GACCAGCGAGCGATACCGGCAGAACTCCACGCACTG...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GGAAGATTTTTAAACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTCAGTGCGTGGAGTTCTaGCGGTATCGCTCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GRFLNIRFDTRHFLVHASQCVEF*RYRSLV
Trigger: GACCAGCGAGCGATACCGGCAGAACTCCACGCACTG...AGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTTTAAAAATCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTACACGCGTCTATTGCTaGAGGAATTTAAAACCCTGG +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKITRVYC*RNLKPW
Trigger: CCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGT...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCTGGCATGAAGCCGTGTaGAAAAGAGCCAACAACAAC +
Preference number: 4 (lower is better)
Translates to: SPLASNASLLPTYPVGMSWHEAV*KRANNN
Trigger: GTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCA...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CCTGAAGCATCTGGTCTTCATCGATGTCATAGAGGTTCCCCATCCGCAGGCAGGGCACTACAGTGCAGATaGATTCTTAACTGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: PEASGLHRCHRGSPSAGRALQCR*ILNCFY
Trigger: ATAAAAACAGTTAAGAATGCATCTGCACTGTAGTGC...CCTGCCTGCGGATGGGGAACCTCTATGACATCGATGAAGACCAGATGCTTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR GCA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTCCAGAAGGGAGGAAATaGAAACTTACGTACATAGGC +
Preference number: 4 (lower is better)
Translates to: NASLLPTYPVGMSRRLALPEGRK*KLTYIG
Trigger: GCCTATGTACGTAAGTTTGCATTTCCTCCCTTCTGG...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAAGCTCCTCTCACCCACTaGCTCCCTCTGTCTCCCTAT +
Preference number: 4 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAEAPLTH*LPLSPY
Trigger: ATAGGGAGACAGAGGGAGGCAGTGGGTGAGAGGAGC...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACAATGGAGGCGATCCTTaGTGGGGTGGATTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNNGGDP*WGGLRS
Trigger: AGACCTTAATCCACCCCAGCAAGGATCGCCTCCATT...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGAAGACCTATAGGGACTTaGCAGCTCAGAGCATTGAAA +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRRPIGT*QLRALK
Trigger: TTTCAATGCTCTGAGCTGGCAAGTCCCTATAGGTCT...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTAGAGTAATCCGTGGATaGCCAGTCATGGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: NPDLRKCHNIATILSGALRVIRG*PVMVLA
Trigger: AGCCAGCACCATGACTGGGCATCCACGGATTACTCT...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAGAGTAATCCGTGGATaGCCAGTCATGGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: FSYISVGAMKWFATNRENRVIRG*PVMVLA
Trigger: AGCCAGCACCATGACTGGGCATCCACGGATTACTCT...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGTGTTTAGTCTCTGTTTaGATTGCATGGGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGECLVSV*IAWVLG
Trigger: ACCAAGGACCCATGCAATGCAAACAGAGACTAAACA...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAATGGACGCTCCAAACTaGAAGAAGGTAGACGTCGGA +
Preference number: 4 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQMDAPN*KKVDVG
Trigger: TCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCAT...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCCCAGAGACCAAGCTaGGGACAATCCAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTSQRPS*GQSRRN
Trigger: ATTTCTTCTGGATTGTCCCCAGCTTGGTCTCTGGGA...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GCAAACAATGACAACAGCAAAACTCTGATCCCACTTTGGGAGACAACAAGCCCTTCCCAGAGACCAAGCTaGGGACAATCCAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: ANNDNSKTLIPLWETTSPSQRPS*GQSRRN
Trigger: ATTTCTTCTGGATTGTCCCCAGCTTGGTCTCTGGGA...AGGGCTTGTTGTCTCCCAAAGTGGGATCAGAGTTTTGCTGTTGTCATTGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR CCA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCGATGGAAACTCTTTTaGGATGAGCTCCGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: QQNTSLHLLPLSRALLDIRWKLF*DELRVP
Trigger: GGGAACACGGAGCTCATCCCAAAAGAGTTTCCATCG...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATAGTGCATCGGGACCTCTaGCCTCTCCATCTGCCCGTA +
Preference number: 4 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGIVHRDL*PLHLPV
Trigger: TACGGGCAGATGGAGAGGCCAGAGGTCCCGATGCAC...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AGTCCCGTAAGTAAACACATAACATTCTGCATTTTCAGTGCGTATTTCCAACAAGTGCATCGGGACCTCTaGCCTCTCCATCTGCCCGTA +
Preference number: 4 (lower is better)
Translates to: SPVSKHITFCIFSAYFQQVHRDL*PLHLPV
Trigger: TACGGGCAGATGGAGAGGCCAGAGGTCCCGATGCAC...TTGTTGGAAATACGCACTGAAAATGCAGAATGTTATGTGTTTACTTACGGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR CCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGAAACATTGACCATAAATaGGTGCAAGGTGTGCATCGG +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRNIDHK*VQGVHR
Trigger: CCGATGCACACCTTGCACCCATTTATGGTCAATGTT...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGCATGTGCGTGCTATTACCCATGGACAGAGACCCAACCGTTTGCATTCAAGTAACATTGACCATAAATaGGTGCAAGGTGTGCATCGG +
Preference number: 4 (lower is better)
Translates to: LHVRAITHGQRPNRLHSSNIDHK*VQGVHR
Trigger: CCGATGCACACCTTGCACCCATTTATGGTCAATGTT...ACTTGAATGCAAACGGTTGGGTCTCTGTCCATGGGTAATAGCACGCACATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTGTGACGATGCTGAGATaGTTGTCATCCGGCTCACAG +
Preference number: 4 (lower is better)
Translates to: NPDLRKCHNIATILSGALVTMLR*LSSGSQ
Trigger: CTGTGAGCCGGATGACAACCATCTCAGCATCGTCAC...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATATGCCATGCTTCCCATTaGTCACCAGATAGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: LYTRLLLQEFKTLGVEYICHASH*SPDRGR
Trigger: ACGACCTCTATCTGGTGACCAATGGGAAGCATGGCA...TATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCGTCCCTTTAGGATTCTaGACAGGCACGGAGTTATTG +
Preference number: 4 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTVPLGF*TGTELL
Trigger: CAATAACTCCGTGCCTGTCCAGAATCCTAAAGGGAC...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CCCTTCTGCCTTTCAAAAATGAAAGGAAGCTCCTCTCACCCACTGCCTCCCTCTCGTCAGATTGAAGTCTaGAGACTTCTTCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PFCLSKMKGSSSHPLPPSRQIEV*RLLLFF
Trigger: GAAGAAAAGAAGAAGTCTCCAGACTTCAATCTGACG...AGAGGGAGGCAGTGGGTGAGAGGAGCTTCCTTTCATTTTTGAAAGGCAGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGTGCTGGAAATGTTTTTaGCTGACCGGAGGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGECWKCF*LTGGVL
Trigger: TAAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCA...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGTCATGTTGGACATGCTaGAAATGTTTTTGGCTGACC +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGESCWTC*KCFWLT
Trigger: GGTCAGCCAAAAACATTTCCAGCATGTCCAACATGA...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTATGAGGGAACCTCTTTaGATGAAGTCAGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIMREPL*MKSAAL
Trigger: AAGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCAT...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGATGAGGGAACCTCTTTaGATGAAGTCAGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQMREPL*MKSAAL
Trigger: AAGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCAT...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTTATCCTTCTGCCGGTTaGCCACAAATGTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIYPSAG*PQMFGV
Trigger: AACTCCAAACATTTGTGGCCAACCGGCAGAAGGATA...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGTTATGGTGTGAATCCTGGCGTATaGAATCCACGGATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: YTANWTPPWLFGNGTSYGVNPGV*NPRISS
Trigger: GGAAGAAATCCGTGGATTCCATACGCCAGGATTCAC...ACCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGGGAGACTGGATTCTaGGATAGTGAATCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRWETGF*DSESWR
Trigger: ACGCCAGGATTCACTATCCCAGAATCCAGTCTCCCA...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACGGGCTCTTTAGGGAGTaGGTCCTATTCTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNGLFRE*VLFSAV
Trigger: AACAGCAGAGAATAGGACCCACTCCCTAAAGAGCCC...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ACAGATGGCATTGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCAGTGGGCCATCTCTTCTaGAAGATACCTAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: TDGIVLLTDHSTHTAVGAVGHLF*KIPRAL
Trigger: AAGAGCCCTAGGTATCTTCCAGAAGAGATGGCCCAC...TGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACAATGCCATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGTGGGCCATCTCTTCTaGAAGATACCTAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LGDINVLVYAALNKTIEAVGHLF*KIPRAL
Trigger: AAGAGCCCTAGGTATCTTCCAGAAGAGATGGCCCAC...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACTTGTCAGGTTCCCTGTaGCACGTGGCCCGATTTGAC +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYLSGSL*HVARFD
Trigger: GTCAAATCGGGCCACGTGCCACAGGGAACCTGACAA...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTCCTCACTACAGTCCTTaGGGTATTTGGAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLPHYSP*GIWRPL
Trigger: CAGTGGCCTCCAAATACCCCAAGGACTGTAGTGAGG...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TGTACCTATCTGAGGACTAGTTGGGTCCTTCTCAAGTGGGGAAAACCAATTAGATGGGGTGGATCTAAGTaGAAACCAGGCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: CTYLRTSWVLLKWGKPIRWGGSK*KPGSFS
Trigger: TGAGAAGGAGCCTGGTTTCCACTTAGATCCACCCCA...TCTAATTGGTTTTCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATAGGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp ACAGATGGCATTGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGGGGTGGATCTAAGTaGAAACCAGGCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: TDGIVLLTDHSTHTAVGAWGGSK*KPGSFS
Trigger: TGAGAAGGAGCCTGGTTTCCACTTAGATCCACCCCA...TGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACAATGCCATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACTGCGGAAGTTTTCACTaGGATCCTGGTAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYCGSFH*DPGRGP
Trigger: CGGACCCCTACCAGGATCCCAGTGAAAACTTCCGCA...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCGGTTCATTGGCAGCGTaGAGTCCCCCTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFGSLAA*SPPCGS
Trigger: ACTTCCGCAAGGGGGACTCCACGCTGCCAATGAACC...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTTCACAACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCGCCGGTATCGCTCGCTaGTCTCACTGTGCGGGGAAC +
Preference number: 4 (lower is better)
Translates to: FHNITVDSSKGHVFSFFIAGIAR*SHCAGN
Trigger: GTTCCCCGCACAGTGAGACCAGCGAGCGATACCGGC...GATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATGCCGGTATCGCTCGCTaGTCTCACTGTGCGGGGAAC +
Preference number: 4 (lower is better)
Translates to: FGLTTNHSSVFWEDFLIHAGIAR*SHCAGN
Trigger: GTTCCCCGCACAGTGAGACCAGCGAGCGATACCGGC...ATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCAAATAGGTGGGCATGTTaGAAAGGCAGCTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: EPNFLISCTCQSHYSADANRWAC*KGSFCS
Trigger: ACTGCAGAAGCTGCCTTTCCAACATGCCCACCTATT...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATCTGCTCCCCGGTGGCTaGGTTACCTGTCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: TLLLILPKATFSVSLSRDLLPGG*VTCLLK
Trigger: CTTCAGGAGACAGGTAACCCAGCCACCGGGGAGCAG...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTAGACCTGCTCCCCGGTaGCTGGGTTACCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVRPAPR*LGYLSP
Trigger: AGGAGACAGGTAACCCAGCCACCGGGGAGCAGGTCT...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTGGGTTATCGGAGGTGTaGTCTGGCAAGAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLGLSEV*SGKRDL
Trigger: CAAGTCTCTCTTGCCAGACCACACCTCCGATAACCC...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGCTGTCATTCACCGCCTaGGATGGCAACGAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: PPTERITQKGEIACLTKLLSFTA*DGNECL
Trigger: CAAACACTCGTTGCCATCCCAGGCGGTGAATGACAG...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGGCCCCGACTGTCCCTaGAACAGTACGATGCCGTTG +
Preference number: 4 (lower is better)
Translates to: TLLLILPKATFSVSLSRDGPDCP*NSTMPL
Trigger: CAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCC...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCATACCCTCCAGAACATTaGCCATTACGTATATTTCCC +
Preference number: 4 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLAYPPEH*PLRIFP
Trigger: GGGAAATATACGTAATGGCCAATGTTCTGGAGGGTA...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTTTCTTTAGGGGAGCCTaGAGTTCTTGGGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: PNLLHMSIALQCRCILNCFFRGA*SSWGEP
Trigger: AGGCTCACCCCAAGAACTCCAGGCTCCCCTAAAGAA...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGTTATGGTGAGTTATGGTTACTCTaGGAGGGAAGGGGTAACAGA +
Preference number: 4 (lower is better)
Translates to: YTANWTPPWLFGNGTSYGELWLL*EGRGNR
Trigger: TCTGTTACCCCTTCCCTCCCAGAGTAACCATAACTC...ACCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAAACCACCATGGCTGTTTaGAAACGGAACGAGTTATGG +
Preference number: 4 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHETTMAV*KRNELW
Trigger: CCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGT...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCAGTTGGTGCTATGAAGTaGTTTGCCACCAACAGAGAG +
Preference number: 4 (lower is better)
Translates to: DVKEDKPKTMLAFGRQMAVGAMK*FATNRE
Trigger: CTCTCTGTTGGTGGCAAACCACTTCATAGCACCAAC...TGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCGTTGGTGCTATGAAGTaGTTTGCCACCAACAGAGAG +
Preference number: 4 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTVGAMK*FATNRE
Trigger: CTCTCTGTTGGTGGCAAACCACTTCATAGCACCAAC...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTGAGGAAACCAGGAAATaGCCAGGCGAGTCTACATTA +
Preference number: 4 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPEETRK*PGESTL
Trigger: TAATGTAGACTCGCCTGGCCATTTCCTGGTTTCCTC...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAAGAGGAAACCAGGAAATaGCCAGGCGAGTCTACATTA +
Preference number: 4 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHEEETRK*PGESTL
Trigger: TAATGTAGACTCGCCTGGCCATTTCCTGGTTTCCTC...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATTTTAGGATCAGATGTTaGGGTGACTATTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHFRIRC*GDYSGP
Trigger: GGGCCCAGAATAGTCACCCCAACATCTGATCCTAAA...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTTAGGATCAGATGTTaGGGTGACTATTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: EPNFLISCTCQSHYSADAFRIRC*GDYSGP
Trigger: GGGCCCAGAATAGTCACCCCAACATCTGATCCTAAA...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTGCATGTGCGTGCTATTACCCATGGACAGAGACCCAACCGTTTGCATTCAAGTGACAGAAAGCCTCTTTaGCTTGACGACAAATCACTC +
Preference number: 4 (lower is better)
Translates to: LHVRAITHGQRPNRLHSSDRKPL*LDDKSL
Trigger: GAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCTGTC...ACTTGAATGCAAACGGTTGGGTCTCTGTCCATGGGTAATAGCACGCACATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAAACTCTCACTCTCCCTaGAGGTCTCTGTGGCATTTG +
Preference number: 4 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQNSHSP*RSLWHL
Trigger: CAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTT...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GAAGAGCGATACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGCTAAGAACTCAGAGCTaGGATATGTTACGGGAATCT +
Preference number: 4 (lower is better)
Translates to: EERYTANWTPPWLFGNGTLRTQS*DMLRES
Trigger: AGATTCCCGTAACATATCCCAGCTCTGAGTTCTTAG...CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAATATCTGAGGACTAGTTaGGTCCTTCTCAAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHEYLRTS*VLLKWG
Trigger: TCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATA...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGAAATACTCAGACTCTCTaGCATCCTGTGAATCAGGGA +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRNTQTL*HPVNQG
Trigger: TCCCTGATTCACAGGATGCCAGAGAGTCTGAGTATT...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCATCTGTTTGCATTGCATaGGTCCTTGGTTATCCTTTG +
Preference number: 4 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLASVCIA*VLGYPL
Trigger: CAAAGGATAACCAAGGACCCATGCAATGCAAACAGA...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGTTATGGTACCTATAAAGCCCGGTaGAAGCGTTCCAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: YTANWTPPWLFGNGTSYGTYKAR*KRSSST
Trigger: TGTTGAACTGGAACGCTTCCACCGGGCTTTATAGGT...ACCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAAAACATTTACGTAAGTaGTCATGGCCCCAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQKHLRK*SWPQSF
Trigger: AAAGCTCTGGGGCCATGACCACTTACGTAAATGTTT...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTCATAGTTCTCAGCAGTaGCCGCTCCTGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYIHSSQQ*PLLVIS
Trigger: GGAGATGACCAGGAGCGGCCACTGCTGAGAACTATG...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396573.6
ENST00000675398.1
3UTR CAA 72 bp CCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCATaGTACTTCTTACAGATCACAGTACACATACGGCTG +
Preference number: 4 (lower is better)
Translates to: PKTMLAFGRQMA*YFLQITVHIRL
Trigger: CAGCCGTATGTGTACTGTGATCTGTAAGAAGTACAATGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CAA 72 bp CCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTaGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: PDLRKCHNIATI*SGALVFVAGTV
Trigger: CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CAA 72 bp GAAATGTTTTTGGCTGACCGGAGGAGTTTTAACATGTaGCTCTGGGATCCCGTCAGATTGAAGTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: EMFLADRRSFNM*LWDPVRLKSGD
Trigger: GTCTCCAGACTTCAATCTGACGGGATCCCAGAGCAACATGTTAAAACTCCTCCGGTCAGCCAAAAACATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
3UTR CAA 72 bp TTGGAGGCCACTGACCTTTTAAAGTTGTCCTTGGTTTaGTGGTTCTTACTGTTGTCAGGTTCCCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LEATDLLKLSLV*WFLLLSGSLWH
Trigger: GTGCCACAGGGAACCTGACAACAGTAAGAACCACAAAACCAAGGACAACTTTAAAAGGTCAGTGGCCTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp TTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATATTATTCTTATTTGCAATAGATGCGCCCCCATaGATGCCCAAGATGGGGACG +
Preference number: 4 (lower is better)
Translates to: LLQEFKTLGVEYILFLFAIDAPP*MPKMGT
Trigger: CGTCCCCATCTTGGGCATTCATGGGGGCGCATCTAT...TGCAAATAAGAATAATATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000562109.5
ENST00000675398.1
CDS-3UTR TCA 90 bp CATAACATAGCAACTATCTTGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTGAACAGTAGAGCAAGATaGCAGAAGAGTGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: HNIATILSGALVFVAGTVNSRAR*QKSGSS
Trigger: AGAAGATCCACTCTTCTGTCATCTTGCTCTACTGTT...CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGGTAGCCTTCCTCAGTaGAGGATAAGTCTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LGDINVLVYAALNKTIEAGSLPQ*RISLCH
Trigger: ATGGCAAAGACTTATCCTTCACTGAGGAAGGCTACC...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCTATGTCTTCCACGATaGCGAATGGGGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFLCLPR*RMGPPP
Trigger: TGGAGGAGGCCCCATTCGTCATCGTGGAAGACATAG...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTGAAACTTTTTGTCACTaGGGCCGGTCACTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSETFCH*GRSLGP
Trigger: TGGACCAAGTGACCGGCCTCAGTGACAAAAAGTTTC...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATGAAACTTTTTGTCACTaGGGCCGGTCACTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: FSYISVGAMKWFATNRENETFCH*GRSLGP
Trigger: TGGACCAAGTGACCGGCCTCAGTGACAAAAAGTTTC...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCTGTAGATGCCCCTGCTaGTGGAGAAGAGCAACCCAG +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFCRCPC*WRRATQ
Trigger: CTGGGTTGCTCTTCTCCATCAGCAGGGGCATCTACA...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
CDS-3UTR TCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTGGGATCCCGTCAGATTaGAGTCTGGAGACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSGIPSD*SLETSS
Trigger: AGAAGAAGTCTCCAGACTTCAATCTGACGGGATCCC...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTGGGAACCTCTTTGGATaGAGTCAGCAGCTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: PNLLHMSIALQCRCILNCGNLFG*SQQLFW
Trigger: CCAAAAGAGCTGCTGACTTCATCCAAAGAGGTTCCC...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGAAAGGACCTGTTGTCTaGGTACATCAAATTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITKGPVV*VHQIPL
Trigger: AAGGGGAATTTGATGTACTCAGACAACAGGTCCTTT...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTGGAATACATAGTTATTaGGGTTATCCTTCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIGIHSY*GYPSAG
Trigger: ACCGGCAGAAGGATAACCTCAATAACTATGTATTCC...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGGGAATACATAGTTATTaGGGTTATCCTTCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITGIHSY*GYPSAG
Trigger: ACCGGCAGAAGGATAACCTCAATAACTATGTATTCC...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCAGTATTTGGAGGCCACTaGCCTTTTAAAGTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMAVFGGH*PFKVVL
Trigger: AAGGACAACTTTAAAAGGTCAGTGGCCTCCAAATAC...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTGTATTTGGAGGCCACTaGCCTTTTAAAGTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: NASLLPTYPVGMSRRLALVFGGH*PFKVVL
Trigger: AAGGACAACTTTAAAAGGTCAGTGGCCTCCAAATAC...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCGTCTCTAGGGGAGCTTaGTTTGGTTTTCAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: EAVCKRANNNNNKIPPYIVSRGA*FGFQVG
Trigger: ACCTACCTGAAAACCAAATCAAGCTCCCCTAGAGAC...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTCCTTGTCTTTCAAGGTaGAGTGCTTGGAGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSPCLSR*SAWSRV
Trigger: AACTCTACTCCAAGCACTTCACCTTGAAAGACAAGG...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCCATGGTGAAGTGGCCTaGATAGGTGGGCATGTTGGA +
Preference number: 4 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFHGEVA*IGGHVG
Trigger: TCCAACATGCCCACCTATTCAGGCCACTTCACCATG...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAAACAGTACGATGCCGTTaGCCTCAAGGACGACCGAAG +
Preference number: 4 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAETVRCR*PQGRPK
Trigger: CTTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGT...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTGGAAGATTATGGCATaGAGCCGTGTGCAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: EAVCKRANNNNNKIPPYIWKIMA*SRVQKS
Trigger: GCTCTTTTGCACACGGCTTCATGCCATAATCTTCCA...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp ATAAGGCATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTCCTCACAAGATTCCTTaGGTGGAAGATTATGGCATG +
Preference number: 4 (lower is better)
Translates to: IRHNMLRNIHIIVAPTVPPHKIP*VEDYGM
Trigger: CATGCCATAATCTTCCACTCAAGGAATCTTGTGAGG...AGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR TCA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCCTCACAAGATTCCTTaGGTGGAAGATTATGGCATG +
Preference number: 4 (lower is better)
Translates to: SPLASNASLLPTYPVGMSPHKIP*VEDYGM
Trigger: CATGCCATAATCTTCCACTCAAGGAATCTTGTGAGG...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTCATCGAAGCCGAGGGTaGGAGAAACACACATCAACA +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLHRSRG*EKHTST
Trigger: TGTTGATGTGTGTTTCTCTCACCCTCGGCTTCGATG...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAAAAAGCCTCTTTGGCTTaGCGACAAATCACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHEKASLA*RQITLL
Trigger: CAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTT...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACAAAGCCTCTTTGGCTTaGCGACAAATCACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHKASLA*RQITLL
Trigger: CAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTT...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp ACAGATGGCATTGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATATGGATGCCAGCTCTaGCTTAAGCCAGCTGAAACT +
Preference number: 4 (lower is better)
Translates to: TDGIVLLTDHSTHTAVGAYGCQL*LKPAET
Trigger: AGTTTCAGCTGGCTTAAGTCAGAGCTGGCATCCATA...TGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACAATGCCATCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTGACGACACAGGATAAGTGCATTTaGTCATCTCTGATCTATATC +
Preference number: 4 (lower is better)
Translates to: PGFRGHQRKTESLFGLTTQDKCI*SSLIYI
Trigger: GATATAGATCAGAGATGATCAAATGCACTTATCCTG...TGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGAGGTTGAGAAAAACCTaGGCCTCAGTTTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMRLRKT*ASVSLS
Trigger: AGATAAGGAAACTGAGGCTCAGGTTTTTCTCAACCT...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTCCCTGTCACAGAGGCTaGTACTCAAGGGTATATGCC +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYIPCHRG*YSRVYA
Trigger: GGCATATACCCTTGAGTATCAGCCTCTGTGACAGGG...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATTCTCAGAAGGAACTATaGACAGAGGTGAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHSQKEL*TEVRSP
Trigger: TGGGGATCTCACCTCTGTTCATAGTTCCTTCTGAGA...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp TGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATGGTCCTCAATCATTCTaGCTACCAAAGCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: CTSYRSQYTYGCWCMSPHGPQSF*LPKLSI
Trigger: GATGGAGAGCTTTGGTAGTCAGAATGATTGAGGACC...ATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAGGTCCTCAATCATTCTaGCTACCAAAGCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQGPQSF*LPKLSI
Trigger: GATGGAGAGCTTTGGTAGTCAGAATGATTGAGGACC...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCATTTTTACTGCCAGCTTaGAAGATGAAAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLAFLLPA*KMKTAE
Trigger: CTCAGCTGTTTTCATCTTTCAAGCTGGCAGTAAAAA...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TCTGCATTTTCAGTGCGTATTTCCAACAATGAGTATGTAAGCAAGCAAACAATGAGCATGACCGTGGCTTaGTGCTGGATGGACGCTCCA +
Preference number: 4 (lower is better)
Translates to: SAFSVRISNNEYVSKQTMSMTVA*CWMDAP
Trigger: TGGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCT...CATTGTTTGCTTGCTTACATACTCATTGTTGGAAATACGCACTGAAAATGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR GCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATAGCATGACCGTGGCTTaGTGCTGGATGGACGCTCCA +
Preference number: 4 (lower is better)
Translates to: TLLLILPKATFSVSLSRDSMTVA*CWMDAP
Trigger: TGGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCT...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCAGTGTGATCACATTCTaGATGTCCCAGCCCACAAAG +
Preference number: 4 (lower is better)
Translates to: QQNTSLHLLPLSRALLDISVITF*MSQPTK
Trigger: CTTTGTGGGCTGGGACATGCAGAATGTGATCACACT...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AGTCCCGTAAGTAAACACATAACATTCTGCATTTTCAGTGCGTATTTCCAACAACAGCGGTGGTTAGGATaGCAATGCCGTCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: SPVSKHITFCIFSAYFQQQRWLG*QCRPSL
Trigger: GAGTGAGGGACGGCATTGGCATCCTAACCACCGCTG...TTGTTGGAAATACGCACTGAAAATGCAGAATGTTATGTGTTTACTTACGGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR GCA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACAATGGGTGCAAGGTGTaGATCGGGACCTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYNGCKV*IGTSGL
Trigger: GAGGCCAGAGGTCCCGATGCACACCTTGCACCCATT...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATTGACCATAAATGGGTaGAAGGTGTGCATCGGGACC +
Preference number: 4 (lower is better)
Translates to: FFLHLCWCYEVVCHQQRELTING*KVCIGT
Trigger: GGTCCCGATGCACACCTTGCACCCATTTATGGTCAA...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGTTAACTTTCTTGCCATaGTTCCCATTGGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMLTFLP*FPLVTR
Trigger: TCTGGTGACCAATGGGAAGCATGGCAAGAAAGTTAA...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCAAGGCCAGGTCGATCTaGCTCTTCCAAGGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFKARSI*LFQGEP
Trigger: AGGCTCTCCTTGGAAGAGGCAGATCGACCTGGCCTT...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TTGCCCACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGTGTGCACTCCATGAATaGAGCTGTAGATGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LPTCKKIILTKQNAHHEECALHE*SCRCPC
Trigger: GCAGGGGCATCTACAGCTGCATTCATGGAGTGCACA...CTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGTGGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCAAGTTCATGTTGGACATaGTGGAAATGTTTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLASSCWT*WKCFWL
Trigger: CAGCCAAAAACATTTCCAGCATGTCCAACATGAACT...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCTCGCTTTGGATTCTGTaGTCACGGCCACCTCCACCG +
Preference number: 4 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFSLWIL*SRPPPP
Trigger: CGGTGGAGGTGGCCGTGAGCACAGAATCCAAAGCGA...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGTGGGTCCTATTCTCTaGTGTTGCCTCATCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RANNNNNKIPPYIFFLLAVGPIL*CCLIPL
Trigger: CAGAGGGATGAGGCAACAGCAGAGAATAGGACCCAC...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTTGGTTTTCAGGTAGGTaGGCTCGACCTCACTACAGT +
Preference number: 4 (lower is better)
Translates to: NPDLRKCHNIATILSGALWFSGR*ARPHYS
Trigger: ACTGTAGTGAGGTCGAGCGCACCTACCTGAAAACCA...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGTGGTTTTCAGGTAGGTaGGCTCGACCTCACTACAGT +
Preference number: 4 (lower is better)
Translates to: PPTERITQKGEIACLTKLWFSGR*ARPHYS
Trigger: ACTGTAGTGAGGTCGAGCGCACCTACCTGAAAACCA...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp ACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCCTATAGAGCGTGGAGTCCCCCTTaGGGAAGTTTTCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: TSNIYPPEHWPLRIFPYRAWSPP*GSFHWD
Trigger: ATCCCAGTGAAAACTTCCGCAAGGGGGACTCCACGC...TCTATAGGGAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAATCGCTGGTCTCACTGTaGGGGGAACCCTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAESLVSL*GEPLSF
Trigger: GAAAGACAAGGGTTCCCCGCACAGTGAGACCAGCGA...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCACCTATCTGGTGTCTaGCATGCTCAGCACACACCT +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYHLSGV*HAQHTP
Trigger: AGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTG...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCATCAATCGCACTACAGTaGAGATGCATTCTTAACTGT +
Preference number: 4 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLASIALQ*RCILNC
Trigger: ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGA...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGAACGAACACACTGATTTaGTATTCTTTAGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRTNTLI*YSLGEP
Trigger: AGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGT...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGCTAGTCAGCCCCTTCTaGCTTTCAAAAATGAAAGGA +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITLVSPF*LSKMKG
Trigger: TCCTTTCATTTTTGAAAGGCAGAAGGGGCTGACTAG...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCACTAGTCAGCCCCTTCTaGCTTTCAAAAATGAAAGGA +
Preference number: 4 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMALVSPF*LSKMKG
Trigger: TCCTTTCATTTTTGAAAGGCAGAAGGGGCTGACTAG...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTAATGGAGGCGATCCTTaGTGGGGTGGATTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: NPDLRKCHNIATILSGALNGGDP*WGGLRS
Trigger: AGACCTTAATCCACCCCAGCAAGGATCGCCTCCATT...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAATGGAGGCGATCCTTaGTGGGGTGGATTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: FSYISVGAMKWFATNRENNGGDP*WGGLRS
Trigger: AGACCTTAATCCACCCCAGCAAGGATCGCCTCCATT...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CATAACATAGCAACTATCTTGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTGAGAGACCCAACCGTTTaGATTCAAGTGTACCTATCT +
Preference number: 4 (lower is better)
Translates to: HNIATILSGALVFVAGTVRDPTV*IQVYLS
Trigger: AGATAGGTACACTTGAATGCAAACGGTTGGGTCTCT...CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGAGAGACCCAACCGTTTaGATTCAAGTGTACCTATCT +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITRDPTV*IQVYLS
Trigger: AGATAGGTACACTTGAATGCAAACGGTTGGGTCTCT...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp ATACGGCTGTTGGTGCATGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGTGGCCTAAGAACCTaGAGATGTAAGGATGATGAA +
Preference number: 4 (lower is better)
Translates to: IRLLVHVTTLTTLGRAIHSGLRT*RCKDDE
Trigger: TTCATCATCCTTACATCTGCAGGTTCTTAGGCCACT...GTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACATGCACCAACAGCCGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACGGAGTGCTCCATTTCTaGATAGCTCAACATTCCAAG +
Preference number: 4 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHGVLHF*IAQHSK
Trigger: CTTGGAATGTTGAGCTATGCAGAAATGGAGCACTCC...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp ATACGGCTGTTGGTGCATGTCACCACATTAACAACTCTGGGAAGAGCGATACACCCCCCAGAGAAGAAATaGTATTGGTCAAATCGTTCT +
Preference number: 4 (lower is better)
Translates to: IRLLVHVTTLTTLGRAIHPPEKK*YWSNRS
Trigger: AGAACGATTTGACCAATAGCATTTCTTCTCTGGGGG...GTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACATGCACCAACAGCCGTAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTTGTCTTCTTCGTTTCTaGAGACCGCTGACACTTTAT +
Preference number: 4 (lower is better)
Translates to: NASLLPTYPVGMSRRLALCLLRF*RPLTLY
Trigger: ATAAAGTGTCAGCGGTCTGCAGAAACGAAGAAGACA...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTGACGACATGGATCTTCGCTCTTTaGTCAGTTATCAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: PGFRGHQRKTESLFGLTTWIFAL*SVINSL
Trigger: AAGACTATTGATAACTGAGCAAAGAGCGAAGATCCA...TGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTCCAAATGAAGACCATTaGTTAGAGCAGACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPPNEDH*LEQTAC
Trigger: GCAAGCTGTCTGCTCTAAGCAATGGTCTTCATTTGG...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp CATTCTGCATTTTCAGTGCGTATTTCCAACAATGAGTATGTAAGCAAGCAAACAGCCCTTTCTTACGGGTaGAAGGTGTGCATCGGGACC +
Preference number: 4 (lower is better)
Translates to: HSAFSVRISNNEYVSKQTALSYG*KVCIGT
Trigger: GGTCCCGATGCACACCTTGCACCCGTAAGAAAGGGC...TGTTTGCTTGCTTACATACTCATTGTTGGAAATACGCACTGAAAATGCAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR GCA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTTGTGCACTCCATGAATaGAGCTGTAGATGCCCATCA +
Preference number: 4 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLCALHE*SCRCPS
Trigger: TGATGGGCATCTACAGCTGCATTCATGGAGTGCACA...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp ACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCCTATAGACATGAATGCCCAAGATaGGGACGAAGGTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TSNIYPPEHWPLRIFPYRHECPR*GRRCGR
Trigger: CCTCCCACACCTTCGTCCCCATCTTGGGCATTCATG...TCTATAGGGAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATATGGACGCTCCAAACTaGAAGAAGGTAGACGTCGGA +
Preference number: 4 (lower is better)
Translates to: FSYISVGAMKWFATNRENMDAPN*KKVDVG
Trigger: TCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCAT...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CATTCTGCATTTTCAGTGCGTATTTCCAACAATGAGTATGTAAGCAAGCAAACAACCGTGGCTTGCTGCTaGATGGACGCTCCAAACTGG +
Preference number: 4 (lower is better)
Translates to: HSAFSVRISNNEYVSKQTTVACC*MDAPNW
Trigger: CCAGTTTGGAGCGTCCATCCAGCAGCAAGCCACGGT...TGTTTGCTTGCTTACATACTCATTGTTGGAAATACGCACTGAAAATGCAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR CCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACTCCCAGAGACCAAGCTaGGGACAATCCAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNSQRPS*GQSRRN
Trigger: ATTTCTTCTGGATTGTCCCCAGCTTGGTCTCTGGGA...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACCAATCACCACCAGCCTaGGGTGCACCTGGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYQSPPA*GAPGSL
Trigger: AAGGCTACCAGGTGCACCCCAGGCTGGTGGTGATTG...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCGACGAACTTCCGACATaGCACGGTGTTCCTCACACA +
Preference number: 4 (lower is better)
Translates to: SILGIFLYTRLLLQEFKTDELPT*HGVPHT
Trigger: TGTGTGAGGAACACCGTGCCATGTCGGAAGTTCGTC...GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACGACGAACTTCCGACATaGCACGGTGTTCCTCACACA +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYDELPT*HGVPHT
Trigger: TGTGTGAGGAACACCGTGCCATGTCGGAAGTTCGTC...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAAGGGGTGCTTTCCCTTTaGCTAAGTTTCTGTTGTATC +
Preference number: 4 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHEGVLSL*LSFCCI
Trigger: GATACAACAGAAACTTAGCCAAAGGGAAAGCACCCC...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTGTAAAAGAAGGCCCATaGGGTGCTTTCCCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSVKEGP*GAFPLA
Trigger: AGCCAAAGGGAAAGCACCCCATGGGCCTTCTTTTAC...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATGTCCCTTTAGGATTCTaGACAGGCACGGAGTTATTG +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHVPLGF*TGTELL
Trigger: CAATAACTCCGTGCCTGTCCAGAATCCTAAAGGGAC...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTTTCCATAACCGGTGGTaGCAAAGATGTACCCACTCC +
Preference number: 4 (lower is better)
Translates to: NPDLRKCHNIATILSGALFHNRW*QRCTHS
Trigger: GGAGTGGGTACATCTTTGCCACCACCGGTTATGGAA...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATTTCCATAACCGGTGGTaGCAAAGATGTACCCACTCC +
Preference number: 4 (lower is better)
Translates to: FSYISVGAMKWFATNRENFHNRW*QRCTHS
Trigger: GGAGTGGGTACATCTTTGCCACCACCGGTTATGGAA...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGACAATTCCATAACCGGTaGTGGCAAAGATGTACCCAC +
Preference number: 4 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRQFHNR*WQRCTH
Trigger: GTGGGTACATCTTTGCCACCACCGGTTATGGAATTG...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACCAATTCCATAACCGGTaGTGGCAAAGATGTACCCAC +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNQFHNR*WQRCTH
Trigger: GTGGGTACATCTTTGCCACCACCGGTTATGGAATTG...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGCGTCAGATTGAAGTCTaGAGACTTCTTCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGERQIEV*RLLLFF
Trigger: GAAGAAAAGAAGAAGTCTCCAGACTTCAATCTGACG...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGTGCTGGAAATGTTTTTaGCTGACCGGAGGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQCWKCF*LTGGVL
Trigger: TAAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCA...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTCATGTTGGACATGCTaGAAATGTTTTTGGCTGACC +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITSCWTC*KCFWLT
Trigger: GGTCAGCCAAAAACATTTCCAGCATGTCCAACATGA...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGATCATGTTGGACATGCTaGAAATGTTTTTGGCTGACC +
Preference number: 4 (lower is better)
Translates to: LASNASLLPTYPVGMSRRSCWTC*KCFWLT
Trigger: GGTCAGCCAAAAACATTTCCAGCATGTCCAACATGA...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTGACGACATTGAGGAGTTCATGTTaGACATGCTGGAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: PGFRGHQRKTESLFGLTTLRSSC*TCWKCF
Trigger: AAAACATTTCCAGCATGTCCAACATGAACTCCTCAA...TGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATAGTCAGCAGCTCTTTTaGGTGAGTCCATTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: CTSYRSQYTYGCWCMSPHSQQLF*VSPFLR
Trigger: CCTCAAGAATGGACTCACCCAAAAGAGCTGCTGACT...ATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATAAGTCAGCAGCTCTTTTaGGTGAGTCCATTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LYTRLLLQEFKTLGVEYISQQLF*VSPFLR
Trigger: CCTCAAGAATGGACTCACCCAAAAGAGCTGCTGACT...TATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp CGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGAAGTCAGCAGCTCTTTTaGGTGAGTCCATTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: RRHKCVSLCSSEQDHRSRSQQLF*VSPFLR
Trigger: CCTCAAGAATGGACTCACCCAAAAGAGCTGCTGACT...TCGGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATCCTTCTGCCGGTTaGCCACAAATGTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVYPSAG*PQMFGV
Trigger: AACTCCAAACATTTGTGGCCAACCGGCAGAAGGATA...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACTATCCTTCTGCCGGTTaGCCACAAATGTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHYPSAG*PQMFGV
Trigger: AACTCCAAACATTTGTGGCCAACCGGCAGAAGGATA...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTGTGAATCCTGGCGTATaGAATCCACGGATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLVNPGV*NPRISS
Trigger: GGAAGAAATCCGTGGATTCCATACGCCAGGATTCAC...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTGGGAGACTGGATTCTaGGATAGTGAATCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSWETGF*DSESWR
Trigger: ACGCCAGGATTCACTATCCCAGAATCCAGTCTCCCA...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCACATTTTCAACAAACTaGGGTGGATCTAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SEIYTSLWPRLSLEQYDATFSTN*GGSKWK
Trigger: TTTCCACTTAGATCCACCCCAGTTTGTTGAAAATGT...GGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp AATTTTTCAACCTGCCACTTTATCCCTTTCTTCAAGAATGTAAAGCAGAATGCAGGGGTTCCGGTTCATTaGCAGCGTGGAGTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: NFSTCHFIPFFKNVKQNAGVPVH*QRGVPL
Trigger: AAGGGGGACTCCACGCTGCCAATGAACCGGAACCCC...TGCATTCTGCTTTACATTCTTGAAGAAAGGGATAAAGTGGCAGGTTGAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAAGTGGCCTGAATAGGTaGGCATGTTGGAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RANNNNNKIPPYIFFLLASGLNR*ACWKGS
Trigger: GCTGCCTTTCCAACATGCCCACCTATTCAGGCCACT...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCCTGTCCTCCAGACCTTaGGGGAAAAGGGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: TEFLDVKEDKPKTMLAFGLSSRP*GKRELF
Trigger: AAAAAGCTCCCTTTTCCCCCAAGGTCTGGAGGACAG...GCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCATCCCTGTGGGAGTaGAGGAAAGGGTTATCGGAG +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYISSLWE*RKGLSE
Trigger: CTCCGATAACCCTTTCCTCCACTCCCACAGGGATGA...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATGGCCCCGACTGTCCCTaGAACAGTACGATGCCGTTG +
Preference number: 4 (lower is better)
Translates to: FGLTTNHSSVFWEDFLIHGPDCP*NSTMPL
Trigger: CAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCC...ATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTTACCCTCCAGAACATTaGCCATTACGTATATTTCCC +
Preference number: 4 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIYPPEH*PLRIFP
Trigger: GGGAAATATACGTAATGGCCAATGTTCTGGAGGGTA...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATTAGCAGGGCACTATTaGACATCCAACATTTACCCT +
Preference number: 4 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMALAGHY*TSNIYP
Trigger: AGGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAA...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGCATGTGCGTGCTATTACCCATGGACAGAGACCCAACCGTTTGCATTCAAGTTTAGCAGGGCACTATTaGACATCCAACATTTACCCT +
Preference number: 4 (lower is better)
Translates to: LHVRAITHGQRPNRLHSSLAGHY*TSNIYP
Trigger: AGGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAA...ACTTGAATGCAAACGGTTGGGTCTCTGTCCATGGGTAATAGCACGCACATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTTTAGCAGGGCACTATTaGACATCCAACATTTACCCT +
Preference number: 4 (lower is better)
Translates to: NASLLPTYPVGMSRRLALLAGHY*TSNIYP
Trigger: AGGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAA...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGTTGAGTGGAAGATTATaGCATGAAGCCGTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQLSGRL*HEAVCK
Trigger: TTTGCACACGGCTTCATGCCATAATCTTCCACTCAA...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTGGTCCCTCGGGCCTTTaGCTCCAGATGTGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVGPSGL*LQMCLG
Trigger: TCCAAGACACATCTGGAGCCAAAGGCCCGAGGGACC...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATGAGTTATGGTTACTCTaGGAGGGAAGGGGTAACAGA +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHELWLL*EGRGNR
Trigger: TCTGTTACCCCTTCCCTCCCAGAGTAACCATAACTC...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTACCACCATGGCTGTTTaGAAACGGAACGAGTTATGG +
Preference number: 4 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLTTMAV*KRNELW
Trigger: CCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGT...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATAATTGGACACCACCATaGCTGTTTGGAAACGGAACG +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHNWTPP*LFGNGT
Trigger: CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATT...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCAATTGGACACCACCATaGCTGTTTGGAAACGGAACG +
Preference number: 4 (lower is better)
Translates to: QQNTSLHLLPLSRALLDINWTPP*LFGNGT
Trigger: CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATT...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCATTGTACTTCTTACAGAATTGGACACCACCATaGCTGTTTGGAAACGGAACG +
Preference number: 4 (lower is better)
Translates to: KPKTMLAFGRQMALYFLQNWTPP*LFGNGT
Trigger: CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATT...CTGTAAGAAGTACAATGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGTTATGGTCGATACACAGCTAATTaGACACCACCATGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: YTANWTPPWLFGNGTSYGRYTAN*TPPWLF
Trigger: AAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCG...ACCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGAGTTGGTGCTATGAAGTaGTTTGCCACCAACAGAGAG +
Preference number: 4 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRVGAMK*FATNRE
Trigger: CTCTCTGTTGGTGGCAAACCACTTCATAGCACCAAC...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCATTGTACTTCTTACAGGTTGGTGCTATGAAGTaGTTTGCCACCAACAGAGAG +
Preference number: 4 (lower is better)
Translates to: KPKTMLAFGRQMALYFLQVGAMK*FATNRE
Trigger: CTCTCTGTTGGTGGCAAACCACTTCATAGCACCAAC...CTGTAAGAAGTACAATGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTTCCTACATCTCTGTTaGTGCTATGAAGTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITFLHLC*CYEVVC
Trigger: GCAAACCACTTCATAGCACCAACAGAGATGTAGGAA...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTATCCAGGCTTCTCCATaGCTGGGTCTTGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVIQASP*LGLGAA
Trigger: TGCTGCCCCAAGACCCAGCCATGGAGAAGCCTGGAT...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTCGATCCTTGCTGGGGTaGATTAAGGTCTGGAATGCA +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSRSLLG*IKVWNA
Trigger: TGCATTCCAGACCTTAATCCACCCCAGCAAGGATCG...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATCGATCCTTGCTGGGGTaGATTAAGGTCTGGAATGCA +
Preference number: 4 (lower is better)
Translates to: FSYISVGAMKWFATNRENRSLLG*IKVWNA
Trigger: TGCATTCCAGACCTTAATCCACCCCAGCAAGGATCG...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTGCATGTGCGTGCTATTACCCATGGACAGAGACCCAACCGTTTGCATTCAAGTCTAAGAACTCAGAGCTaGGATATGTTACGGGAATCT +
Preference number: 4 (lower is better)
Translates to: LHVRAITHGQRPNRLHSSLRTQS*DMLRES
Trigger: AGATTCCCGTAACATATCCCAGCTCTGAGTTCTTAG...ACTTGAATGCAAACGGTTGGGTCTCTGTCCATGGGTAATAGCACGCACATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACATTCACCAAAAAGAGATaGGGTATCTGGAAAGGTCTA +
Preference number: 4 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTFTKKR*GIWKGL
Trigger: TAGACCTTTCCAGATACCCCATCTCTTTTTGGTGAA...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp AAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCATTGTACTTCTTACAGGACTGGAGAACTGGTTaGAACCAGACAAAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: KPKTMLAFGRQMALYFLQDWRTG*NQTKAF
Trigger: GAAGGCTTTTGTCTGGTTCCAACCAGTTCTCCAGTC...CTGTAAGAAGTACAATGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGACAAGGACTGGAGAACTaGTTGGAACCAGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: RRHKCVSLCSSEQDHRSRQGLEN*LEPDKS
Trigger: GCTTTTGTCTGGTTCCAACCAGTTCTCCAGTCCTTG...TCGGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGGGTCAAATCGTTCTTTaGAGTGCTCCATTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGGQIVL*SAPFLH
Trigger: ATGCAGAAATGGAGCACTCCAAAGAACGATTTGACC...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATACCAATAACCAAGCGTTaGTCATCCCTGTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LYTRLLLQEFKTLGVEYIPITKR*SSLSPE
Trigger: TTCAGGAGACAGGGATGACCAACGCTTGGTTATTGG...TATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535259.6
ENST00000562109.5
3UTR CAA 72 bp TGTACTTTCCCAAAGATGGAGCTATTCCATGCATCCTaGAGCTTTAAGGGAATCATCCCTGACACTTGCCCA +
Preference number: 4 (lower is better)
Translates to: CTFPKMELFHAS*SFKGIIPDTCP
Trigger: TGGGCAAGTGTCAGGGATGATTCCCTTAAAGCTCAAGGATGCATGGAATAGCTCCATCTTTGGGAAAGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
3UTR CAA 72 bp CCGGTCAGAGAATCGAGCCAGAAATTGAACCATGTCTaGGATCTAATCCTCGCTCTGATACTCTCTAACTTG +
Preference number: 4 (lower is better)
Translates to: PVRESSQKLNHV*DLILALILSNL
Trigger: CAAGTTAGAGAGTATCAGAGCGAGGATTAGATCCAAGACATGGTTCAATTTCTGGCTCGATTCTCTGACCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTAGGAAGTGTCCAGTGTaGTCACATTCTGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYIRKCPV*SHSACP
Trigger: GGGACATGCAGAATGTGATCACACTGGACACTTCCT...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAAGGAAGTGTCCAGTGTaGTCACATTCTGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSRKCPV*SHSACP
Trigger: GGGACATGCAGAATGTGATCACACTGGACACTTCCT...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTAGGAAGTGTCCAGTGTaGTCACATTCTGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLRKCPV*SHSACP
Trigger: GGGACATGCAGAATGTGATCACACTGGACACTTCCT...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp GCAAACAATGACAACAGCAAAACTCTGATCCCACTTTGGGAGACAACAAGCCCTAACAGTAGAGCAAGATaGCAGAAGAGTGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: ANNDNSKTLIPLWETTSPNSRAR*QKSGSS
Trigger: AGAAGATCCACTCTTCTGTCATCTTGCTCTACTGTT...AGGGCTTGTTGTCTCCCAAAGTGGGATCAGAGTTTTGCTGTTGTCATTGTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR TCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTGAAACTCTTTTGGGATaGGCTCCGTGTTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLETLLG*APCSQR
Trigger: TCTCTGGGAACACGGAGCTCATCCCAAAAGAGTTTC...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTGGTAGCCTTCCTCAGTaGAGGATAAGTCTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSGSLPQ*RISLCH
Trigger: ATGGCAAAGACTTATCCTTCACTGAGGAAGGCTACC...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTGGTAGCCTTCCTCAGTaGAGGATAAGTCTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: NPDLRKCHNIATILSGALGSLPQ*RISLCH
Trigger: ATGGCAAAGACTTATCCTTCACTGAGGAAGGCTACC...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCGGTGCCATTACTTCTTaGAACCATGACACTGATTCC +
Preference number: 4 (lower is better)
Translates to: QQNTSLHLLPLSRALLDIGAITS*NHDTDS
Trigger: GGAATCAGTGTCATGGTTTCAAGAAGTAATGGCACC...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTGGGATCCCGTCAGATTaGAGTCTGGAGACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYIGIPSD*SLETSS
Trigger: AGAAGAAGTCTCCAGACTTCAATCTGACGGGATCCC...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGATCCCGTCAGATTaGAGTCTGGAGACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RANNNNNKIPPYIFFLLAGIPSD*SLETSS
Trigger: AGAAGAAGTCTCCAGACTTCAATCTGACGGGATCCC...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACGGGATCCCGTCAGATTaGAGTCTGGAGACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYGIPSD*SLETSS
Trigger: AGAAGAAGTCTCCAGACTTCAATCTGACGGGATCCC...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGTTATGGTCAAATTCCCCTTATCTaGAACCATGTCCATGATGAG +
Preference number: 4 (lower is better)
Translates to: YTANWTPPWLFGNGTSYGQIPLI*NHVHDE
Trigger: CTCATCATGGACATGGTTTCAGATAAGGGGAATTTG...ACCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCCAAATTCCCCTTATCTaGAACCATGTCCATGATGAG +
Preference number: 4 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTQIPLI*NHVHDE
Trigger: CTCATCATGGACATGGTTTCAGATAAGGGGAATTTG...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTAAAGGACCTGTTGTCTaGGTACATCAAATTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPKGPVV*VHQIPL
Trigger: AAGGGGAATTTGATGTACTCAGACAACAGGTCCTTT...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTGCCCACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGATGCTCTCTTTCCCCTaGAAGGACCTGTTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: LPTCKKIILTKQNAHHEEMLSFP*KDLLSE
Trigger: CTCAGACAACAGGTCCTTTCAGGGGAAAGAGAGCAT...CTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGTGGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACGGAATACATAGTTATTaGGGTTATCCTTCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHGIHSY*GYPSAG
Trigger: ACCGGCAGAAGGATAACCTCAATAACTATGTATTCC...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCGGAATACATAGTTATTaGGGTTATCCTTCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: SPLASNASLLPTYPVGMSGIHSY*GYPSAG
Trigger: ACCGGCAGAAGGATAACCTCAATAACTATGTATTCC...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTGTCTCTAGGGGAGCTTaGTTTGGTTTTCAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLVSRGA*FGFQVG
Trigger: ACCTACCTGAAAACCAAATCAAGCTCCCCTAGAGAC...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGTTGTTCTTTTGTAATTaGAGGGCATTGTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVLFFCN*RALFCA
Trigger: GGCACAGAACAATGCCCTTCAATTACAAAAGAACAA...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTCCCCGAGAGTTTGCTTaGGGGGACACTAAACAGGCT +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSPREFA*GDTKQA
Trigger: AGCCTGTTTAGTGTCCCCTCAAGCAAACTCTCGGGG...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTGGAAGATTATGGCATaGAGCCGTGTGCAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSWKIMA*SRVQKS
Trigger: GCTCTTTTGCACACGGCTTCATGCCATAATCTTCCA...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTGATGTGTCTTGGAAATaGACTATAATGAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: GIQCIIIANIPSRHVPETDVSWK*TIMKVA
Trigger: TGCTACCTTCATTATAGTTCATTTCCAAGACACATC...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATGTGTCTTGGAAATaGACTATAATGAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQDVSWK*TIMKVA
Trigger: TGCTACCTTCATTATAGTTCATTTCCAAGACACATC...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTGATACTATACAACCCTaGGTCATCACCAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLDTIQP*VITRRE
Trigger: CTCCCTTCTGGTGATGACTCAGGGTTGTATAGTATC...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACAGATACTATACAACCCTaGGTCATCACCAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTDTIQP*VITRRE
Trigger: CTCCCTTCTGGTGATGACTCAGGGTTGTATAGTATC...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATAGTTTGGGGTGGAAGTaGGTGTCCAACAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: CTSYRSQYTYGCWCMSPHSLGWK*VSNRIS
Trigger: AGAAATTCTGTTGGACACTCACTTCCACCCCAAACT...ATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp AACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGATCTCTGTTGGTGCTATaGAGTGGTTTGCCACCAACA +
Preference number: 4 (lower is better)
Translates to: NIRFDTRHFLVHASIAAGSLLVL*SGLPPT
Trigger: TGTTGGTGGCAAACCACTTCATAGCACCAACAGAGA...TCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535259.6
CDS-3UTR TCA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCATGGCCCAAAACAGACTaGGGTCTTCTGCAAACACTG +
Preference number: 4 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSWPKTD*GLLQTL
Trigger: CAGTGTTTGCAGAAGACCTCAGTCTGTTTTGGGCCA...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTTGGCCCAAAACAGACTaGGGTCTTCTGCAAACACTG +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLWPKTD*GLLQTL
Trigger: CAGTGTTTGCAGAAGACCTCAGTCTGTTTTGGGCCA...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATCCCTCTGTCTCCCTATaGTTGACCCTGAAATTTATT +
Preference number: 4 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHPSVSL*LTLKFI
Trigger: AATAAATTTCAGGGTCAATCATAGGGAGACAGAGGG...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATTCACAACATTACTGTTaGTTCTTCCAAAGGCCACGT +
Preference number: 4 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHSQHYC*FFQRPR
Trigger: ACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGA...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTTCACAACATTACTGTTaGTTCTTCCAAAGGCCACGT +
Preference number: 4 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPSQHYC*FFQRPR
Trigger: ACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGA...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp GAAGAGCGATACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAAGCGTGAAATGATTTaGCAGATTTTGCTGCAATGT +
Preference number: 4 (lower is better)
Translates to: EERYTANWTPPWLFGNGTKREMI*QILLQC
Trigger: ACATTGCAGCAAAATCTGTCAAATCATTTCACGCTT...CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCAAGAATAAACAATGTGTaGCTATATGACAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLARINNV*LYDSCG
Trigger: TCCACAGCTGTCATATAGTCACACATTGTTTATTCT...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCCCTCTATGCTTCCCTaGTACATTCATACCCTGGTG +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYPSMLP*YIHTLV
Trigger: CACCAGGGTATGAATGTATCAGGGAAGCATAGAGGG...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTAACTATGAACAGAGGTaGGATCCCCAGAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: NPDLRKCHNIATILSGALNYEQR*DPQKFS
Trigger: GGAGAACTTCTGGGGATCTCACCTCTGTTCATAGTT...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp TTGCATGTGCGTGCTATTACCCATGGACAGAGACCCAACCGTTTGCATTCAAGTTTTTTACTGCCAGCTTaGAAGATGAAAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LHVRAITHGQRPNRLHSSFLLPA*KMKTAE
Trigger: CTCAGCTGTTTTCATCTTTCAAGCTGGCAGTAAAAA...ACTTGAATGCAAACGGTTGGGTCTCTGTCCATGGGTAATAGCACGCACATGCAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTAACTGGAAGAGGTCATaGCCCAGGGCTAATGAAGAA +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLNWKRS*PRANEE
Trigger: TTCTTCATTAGCCCTGGGTCATGACCTCTTCCAGTT...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp TGTACCTATCTGAGGACTAGTTGGGTCCTTCTCAAGTGGGGAAAACCAATTAGACTTTCTTGCAGGCAATaGCCAGCTTGTGTATTATGC +
Preference number: 4 (lower is better)
Translates to: CTYLRTSWVLLKWGKPIRLSCRQ*PACVLC
Trigger: GCATAATACACAAGCTGGTCATTGCCTGCAAGAAAG...TCTAATTGGTTTTCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATAGGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TTTCACAACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCGGCTCTTGGGGTCGGTaGGGTTCATCAGCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: FHNITVDSSKGHVFSFFIGSWGR*GSSAEL
Trigger: TAGCTCTGCTGATGAACCGCACCGACCCCAAGAGCC...GATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTATGACCGTGGCTTGCTaGTGGATGGACGCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVMTVAC*WMDAPN
Trigger: GTTTGGAGCGTCCATCCAGCAGCAAGCCACGGTCAT...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CATTCTGCATTTTCAGTGCGTATTTCCAACAATGAGTATGTAAGCAAGCAAACAATGACCGTGGCTTGCTaGTGGATGGACGCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: HSAFSVRISNNEYVSKQTMTVAC*WMDAPN
Trigger: GTTTGGAGCGTCCATCCAGCAGCAAGCCACGGTCAT...TGTTTGCTTGCTTACATACTCATTGTTGGAAATACGCACTGAAAATGCAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR GCA 90 bp TCTGCATTTTCAGTGCGTATTTCCAACAATGAGTATGTAAGCAAGCAAACAATGTGGTTAGGATGCCAATaGCGTCCCTCACTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: SAFSVRISNNEYVSKQTMWLGCQ*RPSLSP
Trigger: AGGCGAGAGTGAGGGACGGCATTGGCATCCTAACCA...CATTGTTTGCTTGCTTACATACTCATTGTTGGAAATACGCACTGAAAATGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR GCA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTCAGCGGTGGTTAGGATaGCAATGCCGTCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: GIWNIGNHNITIGIQCIIQRWLG*QCRPSL
Trigger: GAGTGAGGGACGGCATTGGCATCCTAACCACCGCTG...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp ACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAGAAACAGCGGTGGTTAGGATaGCAATGCCGTCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: TCKKIILTKQNAHHEEKKQRWLG*QCRPSL
Trigger: GAGTGAGGGACGGCATTGGCATCCTAACCACCGCTG...TTTCTTCTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCAATGCAGAACCCCTTaGAGCATTTCTTCACATTCA +
Preference number: 4 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHQCRTP*SISSHS
Trigger: TGAATGTGAAGAAATGCTGCAAGGGGTTCTGCATTG...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATATTATTCTTATTTGCAGGTGAGCGAGCCAACTaGCATGACTGCCCGTTGATA +
Preference number: 4 (lower is better)
Translates to: LLQEFKTLGVEYILFLFAGERAN*HDCPLI
Trigger: TATCAACGGGCAGTCATGGCAGTTGGCTCGCTCACC...TGCAAATAAGAATAATATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGACAGAAGGTGAGACGGTaGCATTACTTCTTGAAACCA +
Preference number: 4 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRQKVRR*HYFLKP
Trigger: TGGTTTCAAGAAGTAATGGCACCGTCTCACCTTCTG...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTCTTGTAATTCAAGACTaGGGCATCGTAGATGAAAGC +
Preference number: 4 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPLVIQD*GIVDES
Trigger: GCTTTCATCTACGATGCCGCAGTCTTGAATTACAAG...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATGGAGTTTTAACATGTTaGTCTGGGATCCCGTCAGAT +
Preference number: 4 (lower is better)
Translates to: RALLDIQHLPSRTLAITYGVLTC*SGIPSD
Trigger: ATCTGACGGGATCCCAGAGCAACATGTTAAAACTCC...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTGGAGTTTTAACATGTTaGTCTGGGATCCCGTCAGAT +
Preference number: 4 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLGVLTC*SGIPSD
Trigger: ATCTGACGGGATCCCAGAGCAACATGTTAAAACTCC...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGAGTTCATGTTGGACATaGTGGAAATGTTTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITSSCWT*WKCFWL
Trigger: CAGCCAAAAACATTTCCAGCATGTCCAACATGAACT...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTTGAGGTTATCCTTCTaGCGGTTGGCCACAAATGTT +
Preference number: 4 (lower is better)
Translates to: CTSYRSQYTYGCWCMSPHLRLSF*RLATNV
Trigger: AACATTTGTGGCCAACCGGCAGAAGGATAACCTCAA...ATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTGAGGTTATCCTTCTaGCGGTTGGCCACAAATGTT +
Preference number: 4 (lower is better)
Translates to: EAVCKRANNNNNKIPPYILRLSF*RLATNV
Trigger: AACATTTGTGGCCAACCGGCAGAAGGATAACCTCAA...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATTTGAGGTTATCCTTCTaGCGGTTGGCCACAAATGTT +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHLRLSF*RLATNV
Trigger: AACATTTGTGGCCAACCGGCAGAAGGATAACCTCAA...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCGCGTGGAGTCCCCCTTaGGGAAGTTTTCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFAWSPP*GSFHWD
Trigger: ATCCCAGTGAAAACTTCCGCAAGGGGGACTCCACGC...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GGAAGATTTTTAAACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTGCGTGGAGTCCCCCTTaGGGAAGTTTTCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: GRFLNIRFDTRHFLVHASAWSPP*GSFHWD
Trigger: ATCCCAGTGAAAACTTCCGCAAGGGGGACTCCACGC...AGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTTTAAAAATCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTGCGTGGAGTCCCCCTTaGGGAAGTTTTCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSAWSPP*GSFHWD
Trigger: ATCCCAGTGAAAACTTCCGCAAGGGGGACTCCACGC...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATATCGCTGGTCTCACTGTaGGGGGAACCCTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGISLVSL*GEPLSF
Trigger: GAAAGACAAGGGTTCCCCGCACAGTGAGACCAGCGA...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATATTATTCTTATTTGCATCGCTGGTCTCACTGTaGGGGGAACCCTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LLQEFKTLGVEYILFLFASLVSL*GEPLSF
Trigger: GAAAGACAAGGGTTCCCCGCACAGTGAGACCAGCGA...TGCAAATAAGAATAATATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCTGGCAAGAGAGACTTaGTCCTCTTGCTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFLARET*SSCCPP
Trigger: TGGAGGACAGCAAGAGGAGCAAGTCTCTCTTGCCAG...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGACACGCGTCTATTGCTaGAGGAATTTAAAACCCTGG +
Preference number: 4 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQTRVYC*RNLKPW
Trigger: CCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGT...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp ACAGATGGCATTGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCAACACGCGTCTATTGCTaGAGGAATTTAAAACCCTGG +
Preference number: 4 (lower is better)
Translates to: TDGIVLLTDHSTHTAVGATRVYC*RNLKPW
Trigger: CCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGT...TGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACAATGCCATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGTACACGCGTCTATTaGTGCAGGAATTTAAAACCC +
Preference number: 4 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSCTRVY*CRNLKP
Trigger: GGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACA...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AGCATAAGGCATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCTGTACACGCGTCTATTaGTGCAGGAATTTAAAACCC +
Preference number: 4 (lower is better)
Translates to: SIRHNMLRNIHIIVAPTVCTRVY*CRNLKP
Trigger: GGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACA...GACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATGGCATGAAGCCGTGTaGAAAAGAGCCAACAACAAC +
Preference number: 4 (lower is better)
Translates to: FFLHLCWCYEVVCHQQREWHEAV*KRANNN
Trigger: GTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCA...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTATCTGGTGTCTGCCATaGTCAGCACACACCTCACAA +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLIWCLP*SAHTSQ
Trigger: TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGAT...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCACATGTCCCGGAGACTTaGCCTTATGTAGTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: EPNFLISCTCQSHYSADAHVPET*PYVVSY
Trigger: ATAACTAACTACATAAGGGCAAGTCTCCGGGACATG...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTGACGACAGCACTACAGTGCAGATaGATTCTTAACTGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: PGFRGHQRKTESLFGLTTALQCR*ILNCFY
Trigger: ATAAAAACAGTTAAGAATGCATCTGCACTGTAGTGC...TGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp ATACGGCTGTTGGTGCATGTCACCACATTAACAACTCTGGGAAGAGCGATACACAACTTCCTAATCTCTTaGACATGTCAATCGCACTAC +
Preference number: 4 (lower is better)
Translates to: IRLLVHVTTLTTLGRAIHNFLIS*TCQSHY
Trigger: GTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTT...GTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACATGCACCAACAGCCGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCAACGAACACACTGATTTaGTATTCTTTAGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: DVKEDKPKTMLAFGRQMATNTLI*YSLGEP
Trigger: AGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGT...TGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACCCAGAAGGGAGGAAATaGAAACTTACGTACATAGGC +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNPEGRK*KLTYIG
Trigger: GCCTATGTACGTAAGTTTGCATTTCCTCCCTTCTGG...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATCCAGAAGGGAGGAAATaGAAACTTACGTACATAGGC +
Preference number: 4 (lower is better)
Translates to: RALLDIQHLPSRTLAITYPEGRK*KLTYIG
Trigger: GCCTATGTACGTAAGTTTGCATTTCCTCCCTTCTGG...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCATATTTCAATGGTCACTaGCAGCCTTTTATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLAYFNGH*QPFIFS
Trigger: ACTGAAGATAAAAGGCTGGCAGTGACCATTGAAATA...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACGTGTGCTCAGGGGCATaGCTGCAGGATATGTTAAAC +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYVCSGA*LQDMLN
Trigger: GTTTAACATATCCTGCAGGCATGCCCCTGAGCACAC...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TTTCACAACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCAGGAAAGGCAGTGTGTaGTCAGGGGCATGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: FHNITVDSSKGHVFSFFIRKGSV*SGACLQ
Trigger: CTGCAGGCATGCCCCTGAGCACACACTGCCTTTCCT...GATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp CGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGACCAAATGAAGACCATTaGTTAGAGCAGACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: RRHKCVSLCSSEQDHRSRPNEDH*LEQTAC
Trigger: GCAAGCTGTCTGCTCTAAGCAATGGTCTTCATTTGG...TCGGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAATGGGGACGAAGGTGTaGGAGGAGATAAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: RANNNNNKIPPYIFFLLAMGTKV*EEIKSS
Trigger: GCTGGATTTTATCTCCTCCCACACCTTCGTCCCCAT...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCATGGACGCTCCAAACTaGAAGAAGGTAGACGTCGGA +
Preference number: 4 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFMDAPN*KKVDVG
Trigger: TCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCAT...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAGAAAACCGTGGCTTGCTGCTaGATGGACGCTCCAAACTGG +
Preference number: 4 (lower is better)
Translates to: TCKKIILTKQNAHHEEKKTVACC*MDAPNW
Trigger: CCAGTTTGGAGCGTCCATCCAGCAGCAAGCCACGGT...TTTCTTCTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATCCCAGAGACCAAGCTaGGGACAATCCAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: FFLHLCWCYEVVCHQQRESQRPS*GQSRRN
Trigger: ATTTCTTCTGGATTGTCCCCAGCTTGGTCTCTGGGA...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCACGATGGAAACTCTTTTaGGATGAGCTCCGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSRWKLF*DELRVP
Trigger: GGGAACACGGAGCTCATCCCAAAAGAGTTTCCATCG...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCAACATTGACCATAAATaGGTGCAAGGTGTGCATCGG +
Preference number: 4 (lower is better)
Translates to: EAVCKRANNNNNKIPPYINIDHK*VQGVHR
Trigger: CCGATGCACACCTTGCACCCATTTATGGTCAATGTT...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAAACATTGACCATAAATaGGTGCAAGGTGTGCATCGG +
Preference number: 4 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQNIDHK*VQGVHR
Trigger: CCGATGCACACCTTGCACCCATTTATGGTCAATGTT...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCTGCCATGCTTCCCATTaGTCACCAGATAGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: SILGIFLYTRLLLQEFKTCHASH*SPDRGR
Trigger: ACGACCTCTATCTGGTGACCAATGGGAAGCATGGCA...GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGGGGGTGCTTTCCCTTTaGCTAAGTTTCTGTTGTATC +
Preference number: 4 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQGVLSL*LSFCCI
Trigger: GATACAACAGAAACTTAGCCAAAGGGAAAGCACCCC...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATGGGGTGCTTTCCCTTTaGCTAAGTTTCTGTTGTATC +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHGVLSL*LSFCCI
Trigger: GATACAACAGAAACTTAGCCAAAGGGAAAGCACCCC...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCGGGGTGCTTTCCCTTTaGCTAAGTTTCTGTTGTATC +
Preference number: 4 (lower is better)
Translates to: QQNTSLHLLPLSRALLDIGVLSL*LSFCCI
Trigger: GATACAACAGAAACTTAGCCAAAGGGAAAGCACCCC...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTGTAAAAGAAGGCCCATaGGGTGCTTTCCCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYIVKEGP*GAFPLA
Trigger: AGCCAAAGGGAAAGCACCCCATGGGCCTTCTTTTAC...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTGTCCCTTTAGGATTCTaGACAGGCACGGAGTTATTG +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLVPLGF*TGTELL
Trigger: CAATAACTCCGTGCCTGTCCAGAATCCTAAAGGGAC...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTGTCCCTTTAGGATTCTaGACAGGCACGGAGTTATTG +
Preference number: 4 (lower is better)
Translates to: NPDLRKCHNIATILSGALVPLGF*TGTELL
Trigger: CAATAACTCCGTGCCTGTCCAGAATCCTAAAGGGAC...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACCCAAATCGAAAAGGTaGGGAATAGTCATGAGGTCT +
Preference number: 4 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQPKSKR*GIVMRS
Trigger: AGACCTCATGACTATTCCCCACCTTTTCGATTTGGG...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ATACGGCTGTTGGTGCATGTCACCACATTAACAACTCTGGGAAGAGCGATACACCGTCAGATTGAAGTCTaGAGACTTCTTCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: IRLLVHVTTLTTLGRAIHRQIEV*RLLLFF
Trigger: GAAGAAAAGAAGAAGTCTCCAGACTTCAATCTGACG...GTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACATGCACCAACAGCCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACTTTAACATGTTGCTCTaGGATCCCGTCAGATTGAAG +
Preference number: 4 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHFNMLL*DPVRLK
Trigger: CTTCAATCTGACGGGATCCCAGAGCAACATGTTAAA...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATTTAACATGTTGCTCTaGGATCCCGTCAGATTGAAG +
Preference number: 4 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVFNMLL*DPVRLK
Trigger: CTTCAATCTGACGGGATCCCAGAGCAACATGTTAAA...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAATGCTGGAAATGTTTTTaGCTGACCGGAGGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHECWKCF*LTGGVL
Trigger: TAAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCA...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATGCTGGAAATGTTTTTaGCTGACCGGAGGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVCWKCF*LTGGVL
Trigger: TAAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCA...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTAGTCAGCAGCTCTTTTaGGTGAGTCCATTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PNLLHMSIALQCRCILNCSQQLF*VSPFLR
Trigger: CCTCAAGAATGGACTCACCCAAAAGAGCTGCTGACT...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCATGAGGGAACCTCTTTaGATGAAGTCAGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: EAVCKRANNNNNKIPPYIMREPL*MKSAAL
Trigger: AAGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCAT...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATTGGCCACAAATGTTTaGAGTTCGTTCATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMALATNV*SSFMLS
Trigger: AGACAACATGAACGAACTCCAAACATTTGTGGCCAA...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTTATCCTTCTGCCGGTTaGCCACAAATGTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLYPSAG*PQMFGV
Trigger: AACTCCAAACATTTGTGGCCAACCGGCAGAAGGATA...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTGTGAATCCTGGCGTATaGAATCCACGGATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSVNPGV*NPRISS
Trigger: GGAAGAAATCCGTGGATTCCATACGCCAGGATTCAC...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGATGGGATAGTGAATCCTaGCGTATGGAATCCACGGAT +
Preference number: 4 (lower is better)
Translates to: NIRFDTRHFLVHASIAAGWDSES*RMESTD
Trigger: ATCCGTGGATTCCATACGCCAGGATTCACTATCCCA...TCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCTGGGAGACTGGATTCTaGGATAGTGAATCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFWETGF*DSESWR
Trigger: ACGCCAGGATTCACTATCCCAGAATCCAGTCTCCCA...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTGGGAGACTGGATTCTaGGATAGTGAATCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYIWETGF*DSESWR
Trigger: ACGCCAGGATTCACTATCCCAGAATCCAGTCTCCCA...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTGTGGGCCATCTCTTCTaGAAGATACCTAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYIVGHLF*KIPRAL
Trigger: AAGAGCCCTAGGTATCTTCCAGAAGAGATGGCCCAC...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATTCTGAAATGTCAGAGTaGGCCATCTCTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHSEMSE*AISSGR
Trigger: TCTTCCAGAAGAGATGGCCCACTCTGACATTTCAGA...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATTCTGAAATGTCAGAGTaGGCCATCTCTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RALLDIQHLPSRTLAITYSEMSE*AISSGR
Trigger: TCTTCCAGAAGAGATGGCCCACTCTGACATTTCAGA...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGCCTCACTACAGTCCTTaGGGTATTTGGAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: TVDSSKGHVFSFFIQRCMPHYSP*GIWRPL
Trigger: CAGTGGCCTCCAAATACCCCAAGGACTGTAGTGAGG...CATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGACATTTTCAACAAACTaGGGTGGATCTAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: YLVSAMLSTHLTRFLEWKTFSTN*GGSKWK
Trigger: TTTCCACTTAGATCCACCCCAGTTTGTTGAAAATGT...CTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCGGAAGTTTTCACTaGGATCCTGGTAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVCGSFH*DPGRGP
Trigger: CGGACCCCTACCAGGATCCCAGTGAAAACTTCCGCA...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTTGCGGAAGTTTTCACTaGGATCCTGGTAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSCGSFH*DPGRGP
Trigger: CGGACCCCTACCAGGATCCCAGTGAAAACTTCCGCA...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCGTTGGTCATCCCTGTaGGAGTGGAGGAAAGGGTTA +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFRWSSL*EWRKGL
Trigger: TAACCCTTTCCTCCACTCCCACAGGGATGACCAACG...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACTACCCTCCAGAACATTaGCCATTACGTATATTTCCC +
Preference number: 4 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHYPPEH*PLRIFP
Trigger: GGGAAATATACGTAATGGCCAATGTTCTGGAGGGTA...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAAAGGACTCACCTATCTaGTGTCTGCCATGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSKDSPI*CLPCSA
Trigger: TGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTT...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCACCACCATGGCTGTTTaGAAACGGAACGAGTTATGG +
Preference number: 4 (lower is better)
Translates to: TEFLDVKEDKPKTMLAFGTTMAV*KRNELW
Trigger: CCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGT...GCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ACAGATGGCATTGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCACGATACACAGCTAATTaGACACCACCATGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: TDGIVLLTDHSTHTAVGARYTAN*TPPWLF
Trigger: AAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCG...TGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACAATGCCATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATCCTTCGGCAGACAGATaGCATTGTACTTCTTACAGA +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHPSADR*HCTSYR
Trigger: TCTGTAAGAAGTACAATGCCATCTGTCTGCCGAAGG...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCATTGTACTTCTTACAGCCTTCGGCAGACAGATaGCATTGTACTTCTTACAGA +
Preference number: 4 (lower is better)
Translates to: KPKTMLAFGRQMALYFLQPSADR*HCTSYR
Trigger: TCTGTAAGAAGTACAATGCCATCTGTCTGCCGAAGG...CTGTAAGAAGTACAATGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATATCCAGGCTTCTCCATaGCTGGGTCTTGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: FGLTTNHSSVFWEDFLIHIQASP*LGLGAA
Trigger: TGCTGCCCCAAGACCCAGCCATGGAGAAGCCTGGAT...ATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCCTATAGAGGGTGGATTAAGGTCTaGAATGCACTGGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TSNIYPPEHWPLRIFPYRGWIKV*NALEGQ
Trigger: CTGCCCTTCCAGTGCATTCCAGACCTTAATCCACCC...TCTATAGGGAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCAACTCTCACTCTCCCTaGAGGTCTCTGTGGCATTTG +
Preference number: 4 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFNSHSP*RSLWHL
Trigger: CAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTT...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGCGTGCTATTACCCATaGACAGAGACCCAACCGTTT +
Preference number: 4 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFACYYP*TETQPF
Trigger: AAACGGTTGGGTCTCTGTCCATGGGTAATAGCACGC...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCAAAGAGATGGGGTATCTaGAAAGGTCTAATTTTGTCT +
Preference number: 4 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLAKRWGI*KGLILS
Trigger: AGACAAAATTAGACCTTTCCAGATACCCCATCTCTT...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGTTATGGTAAATTCAAAGAAGCATaGGTAGGTCTTTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: YTANWTPPWLFGNGTSYGKFKEA*VGLSGA
Trigger: TGCCCCAGAAAGACCTACCCATGCTTCTTTGAATTT...ACCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGCATTGCATGGGTCCTTaGTTATCCTTTGTATTAGAG +
Preference number: 4 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVHCMGP*LSFVLE
Trigger: CTCTAATACAAAGGATAACCAAGGACCCATGCAATG...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATCTGTTTGCATTGCATaGGTCCTTGGTTATCCTTTG +
Preference number: 4 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVSVCIA*VLGYPL
Trigger: CAAAGGATAACCAAGGACCCATGCAATGCAAACAGA...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTCAAGGACTGGAGAACTaGTTGGAACCAGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: PNLLHMSIALQCRCILNCQGLEN*LEPDKS
Trigger: GCTTTTGTCTGGTTCCAACCAGTTCTCCAGTCCTTG...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTTCTCCAGAGAATTCATaGAGACTCCCAGAAAGACAT +
Preference number: 4 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPSPENS*RLPERH
Trigger: ATGTCTTTCTGGGAGTCTCCATGAATTCTCTGGAGA...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCTCCAGAGAATTCATaGAGACTCCCAGAAAGACAT +
Preference number: 4 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTSPENS*RLPERH
Trigger: ATGTCTTTCTGGGAGTCTCCATGAATTCTCTGGAGA...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACAATTCCAAGGAGAACATaGTCACGCACTTGTAGACCC +
Preference number: 4 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTIPRRT*SRTCRP
Trigger: GGGTCTACAAGTGCGTGACCATGTTCTCCTTGGAAT...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGGGGACCCTCAGGTTTaGAAGGCATCTGAGCCACAT +
Preference number: 4 (lower is better)
Translates to: TLLLILPKATFSVSLSRDGDPQV*KASEPH
Trigger: ATGTGGCTCAGATGCCTTCCAAACCTGAGGGTCCCC...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CAA 72 bp ATCATAACATCACCATTGGCATCCAATGCATCATTATaGCCAACATACCCAGTAGGCATGTCCCGGAGACTT +
Preference number: 4 (lower is better)
Translates to: IITSPLASNASL*PTYPVGMSRRL
Trigger: AAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGATGTTATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR CAA 72 bp CTAGAAGACTCTCTTACCCAGAGTATTTTAAATTGGTaGCATGTGCGTGCTATTACCCATGGACAGAGACCC +
Preference number: 4 (lower is better)
Translates to: LEDSLTQSILNW*HVRAITHGQRP
Trigger: GGGTCTCTGTCCATGGGTAATAGCACGCACATGCAACCAATTTAAAATACTCTGGGTAAGAGAGTCTTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CAA 72 bp ATTGAGGTTATCCTTCTGCCGGTTGGCCACAAATGTTaGGAGTTCGTTCATGTTGTCTCCAAAAATGCTCTC +
Preference number: 4 (lower is better)
Translates to: IEVILLPVGHKC*EFVHVVSKNAL
Trigger: GAGAGCATTTTTGGAGACAACATGAACGAACTCCAAACATTTGTGGCCAACCGGCAGAAGGATAACCTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR TCA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATAACAGTAGAGCAAGATaGCAGAAGAGTGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: RALLDIQHLPSRTLAITYNSRAR*QKSGSS
Trigger: AGAAGATCCACTCTTCTGTCATCTTGCTCTACTGTT...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATAAACAGTAGAGCAAGATaGCAGAAGAGTGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: LYTRLLLQEFKTLGVEYINSRAR*QKSGSS
Trigger: AGAAGATCCACTCTTCTGTCATCTTGCTCTACTGTT...TATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR TCA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCACGTAGGAGACAGAAATaGGTCCCGATGGAAACTCTT +
Preference number: 4 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSRRRQK*VPMETL
Trigger: AAGAGTTTCCATCGGGACTCATTTCTGTCTCCTACG...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCACGTAGGAGACAGAAATaGGTCCCGATGGAAACTCTT +
Preference number: 4 (lower is better)
Translates to: RANNNNNKIPPYIFFLLARRRQK*VPMETL
Trigger: AAGAGTTTCCATCGGGACTCATTTCTGTCTCCTACG...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATCTATGTCTTCCACGATaGCGAATGGGGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FGLTTNHSSVFWEDFLIHLCLPR*RMGPPP
Trigger: TGGAGGAGGCCCCATTCGTCATCGTGGAAGACATAG...ATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCGAAACTTTTTGTCACTaGGGCCGGTCACTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFETFCH*GRSLGP
Trigger: TGGACCAAGTGACCGGCCTCAGTGACAAAAAGTTTC...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACAAATTCCCCTTATCTaGAACCATGTCCATGATGAG +
Preference number: 4 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQQIPLI*NHVHDE
Trigger: CTCATCATGGACATGGTTTCAGATAAGGGGAATTTG...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGAAAAGGACCTGTTGTCTaGGTACATCAAATTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRKGPVV*VHQIPL
Trigger: AAGGGGAATTTGATGTACTCAGACAACAGGTCCTTT...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATGTATTTGGAGGCCACTaGCCTTTTAAAGTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHVFGGH*PFKVVL
Trigger: AAGGACAACTTTAAAAGGTCAGTGGCCTCCAAATAC...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGTCTCTAGGGGAGCTTaGTTTGGTTTTCAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: RANNNNNKIPPYIFFLLAVSRGA*FGFQVG
Trigger: ACCTACCTGAAAACCAAATCAAGCTCCCCTAGAGAC...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTCCTTGTCTTTCAAGGTaGAGTGCTTGGAGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: NPDLRKCHNIATILSGALPCLSR*SAWSRV
Trigger: AACTCTACTCCAAGCACTTCACCTTGAAAGACAAGG...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTTTGTTCTTTTGTAATTaGAGGGCATTGTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPLFFCN*RALFCA
Trigger: GGCACAGAACAATGCCCTTCAATTACAAAAGAACAA...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCATGGAAGATTATGGCATaGAGCCGTGTGCAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: RANNNNNKIPPYIFFLLAWKIMA*SRVQKS
Trigger: GCTCTTTTGCACACGGCTTCATGCCATAATCTTCCA...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTCCTCACAAGATTCCTTaGGTGGAAGATTATGGCATG +
Preference number: 4 (lower is better)
Translates to: NPDLRKCHNIATILSGALPHKIP*VEDYGM
Trigger: CATGCCATAATCTTCCACTCAAGGAATCTTGTGAGG...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAGTCTTCTGCAAACACTaGTGGCTAGTTATCCCAAAT +
Preference number: 4 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQVFCKH*WLVIPN
Trigger: ATTTGGGATAACTAGCCATCAGTGTTTGCAGAAGAC...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGGTCTTCTGCAAACACTaGTGGCTAGTTATCCCAAAT +
Preference number: 4 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQVFCKH*WLVIPN
Trigger: ATTTGGGATAACTAGCCATCAGTGTTTGCAGAAGAC...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATGTCTTCTGCAAACACTaGTGGCTAGTTATCCCAAAT +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHVFCKH*WLVIPN
Trigger: ATTTGGGATAACTAGCCATCAGTGTTTGCAGAAGAC...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATCCCTCTGTCTCCCTATaGTTGACCCTGAAATTTATT +
Preference number: 4 (lower is better)
Translates to: CTSYRSQYTYGCWCMSPHPSVSL*LTLKFI
Trigger: AATAAATTTCAGGGTCAATCATAGGGAGACAGAGGG...ATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACCCCTCTGTCTCCCTATaGTTGACCCTGAAATTTATT +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNPSVSL*LTLKFI
Trigger: AATAAATTTCAGGGTCAATCATAGGGAGACAGAGGG...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTAAAGCCTCTTTGGCTTaGCGACAAATCACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PNLLHMSIALQCRCILNCKASLA*RQITLL
Trigger: CAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTT...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp ACAGATGGCATTGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATCACAACATTACTGTTaGTTCTTCCAAAGGCCACGT +
Preference number: 4 (lower is better)
Translates to: TDGIVLLTDHSTHTAVGASQHYC*FFQRPR
Trigger: ACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGA...TGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACAATGCCATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATCTTTTTGCAAAGACTaGACTGACTTAGATGACCTT +
Preference number: 4 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMASFCKD*TDLDDL
Trigger: AAGGTCATCTAAGTCAGTTCAGTCTTTGCAAAAAGA...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGCAGGATAAGTGCATTTaGTCATCTCTGATCTATATC +
Preference number: 4 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGQDKCI*SSLIYI
Trigger: GATATAGATCAGAGATGATCAAATGCACTTATCCTG...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACAAACAATATCCCTGTTaGTTTTTCCTAAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHKQYPC*FFLRRR
Trigger: CCGTCTCCTTAGGAAAAATCAACAGGGATATTGTTT...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTAAAACAATATCCCTGTTaGTTTTTCCTAAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVKQYPC*FFLRRR
Trigger: CCGTCTCCTTAGGAAAAATCAACAGGGATATTGTTT...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGAAAGTGGACATTCAGTaGAGTCCTATTAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQKVDIQ*SPISWS
Trigger: TGACCAGCTAATAGGACTTCACTGAATGTCCACTTT...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCATCTCAGAAGGAACTATaGACAGAGGTGAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: RANNNNNKIPPYIFFLLASQKEL*TEVRSP
Trigger: TGGGGATCTCACCTCTGTTCATAGTTCCTTCTGAGA...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTGCATACCCACACACATaGGAGCATGTACTATGTATA +
Preference number: 4 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLAYPHT*EHVLCI
Trigger: TATACATAGTACATGCTCTCATGTGTGTGGGTATGC...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGGAGAGTTGCATGCTTTaGAATACAACCCCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: PPTERITQKGEIACLTKLESCML*NTTPRE
Trigger: TTCTCTGGGGGTTGTATTTCAAAGCATGCAACTCTC...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAACATCAAGTCAGTTCTaGTGTGGGTTTTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQTSSQF*CGFWIL
Trigger: CAGAATCCAAAACCCACATCAGAACTGACTTGATGT...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCACATCAAGTCAGTTCTaGTGTGGGTTTTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: EAVCKRANNNNNKIPPYITSSQF*CGFWIL
Trigger: CAGAATCCAAAACCCACATCAGAACTGACTTGATGT...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp GCAAACAATGACAACAGCAAAACTCTGATCCCACTTTGGGAGACAACAAGCCCTGCGTATTTCCAACAATaGGTATGTAAGCAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: ANNDNSKTLIPLWETTSPAYFQQ*VCKQAN
Trigger: GTTTGCTTGCTTACATACTCATTGTTGGAAATACGC...AGGGCTTGTTGTCTCCCAAAGTGGGATCAGAGTTTTGCTGTTGTCATTGTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR GCA 90 bp ACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCCTATAGAAGCCATGATCATAGATaGGCCCCCATGAATGCCCAA +
Preference number: 4 (lower is better)
Translates to: TSNIYPPEHWPLRIFPYRSHDHR*APMNAQ
Trigger: TTGGGCATTCATGGGGGCGCATCTATGATCATGGCT...TCTATAGGGAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTATGACCGTGGCTTGCTaGTGGATGGACGCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: GIWNIGNHNITIGIQCIIMTVAC*WMDAPN
Trigger: GTTTGGAGCGTCCATCCAGCAGCAAGCCACGGTCAT...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTAGTGTGATCACATTCTaGATGTCCCAGCCCACAAAG +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYISVITF*MSQPTK
Trigger: CTTTGTGGGCTGGGACATGCAGAATGTGATCACACT...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAATTGACCATAAATGGGTaGAAGGTGTGCATCGGGACC +
Preference number: 4 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAELTING*KVCIGT
Trigger: GGTCCCGATGCACACCTTGCACCCATTTATGGTCAA...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCCAATGCAGAACCCCTTaGAGCATTTCTTCACATTCA +
Preference number: 4 (lower is better)
Translates to: LGDINVLVYAALNKTIEAQCRTP*SISSHS
Trigger: TGAATGTGAAGAAATGCTGCAAGGGGTTCTGCATTG...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACGCCAACTGCCATGACTaGCCGTTGATAGACCACTTC +
Preference number: 4 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYANCHD*PLIDHF
Trigger: GAAGTGGTCTATCAACGGGCAGTCATGGCAGTTGGC...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCGCCAACTGCCATGACTaGCCGTTGATAGACCACTTC +
Preference number: 4 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFANCHD*PLIDHF
Trigger: GAAGTGGTCTATCAACGGGCAGTCATGGCAGTTGGC...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTCAGAAGGTGAGACGGTaGCATTACTTCTTGAAACCA +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSQKVRR*HYFLKP
Trigger: TGGTTTCAAGAAGTAATGGCACCGTCTCACCTTCTG...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACACAGAAGGTGAGACGGTaGCATTACTTCTTGAAACCA +
Preference number: 4 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTQKVRR*HYFLKP
Trigger: TGGTTTCAAGAAGTAATGGCACCGTCTCACCTTCTG...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCCTTGTAATTCAAGACTaGGGCATCGTAGATGAAAGC +
Preference number: 4 (lower is better)
Translates to: EAVCKRANNNNNKIPPYILVIQD*GIVDES
Trigger: GCTTTCATCTACGATGCCGCAGTCTTGAATTACAAG...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCTGTGCACTCCATGAATaGAGCTGTAGATGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFCALHE*SCRCPC
Trigger: GCAGGGGCATCTACAGCTGCATTCATGGAGTGCACA...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATAGATTTCTTCCACAGCTaGCGGGGTCTAGAGTTCGCT +
Preference number: 4 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGIDFFHS*RGLEFA
Trigger: AGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATC...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTACACGCGTCTATTGCTaGAGGAATTTAAAACCCTGG +
Preference number: 4 (lower is better)
Translates to: PNLLHMSIALQCRCILNCTRVYC*RNLKPW
Trigger: CCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGT...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCATCTGGTGTCTGCCATaGTCAGCACACACCTCACAA +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFIWCLP*SAHTSQ
Trigger: TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGAT...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTACACCTATCTGGTGTCTaGCATGCTCAGCACACACCT +
Preference number: 4 (lower is better)
Translates to: LLLILPKATFSVSLSRDVHLSGV*HAQHTP
Trigger: AGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTG...TACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATCATGTCCCGGAGACTTaGCCTTATGTAGTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: CTSYRSQYTYGCWCMSPHHVPET*PYVVSY
Trigger: ATAACTAACTACATAAGGGCAAGTCTCCGGGACATG...ATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACTCAATCGCACTACAGTaGAGATGCATTCTTAACTGT +
Preference number: 4 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHSIALQ*RCILNC
Trigger: ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGA...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGACGAACACACTGATTTaGTATTCTTTAGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQTNTLI*YSLGEP
Trigger: AGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGT...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTAGACCTATAGGGACTTaGCAGCTCAGAGCATTGAAA +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLRPIGT*QLRALK
Trigger: TTTCAATGCTCTGAGCTGGCAAGTCCCTATAGGTCT...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACAAGTCTCTGTTTGCATTaGATGGGTCCTTGGTTATCC +
Preference number: 4 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTSLCLH*MGPWLS
Trigger: GGATAACCAAGGACCCATGCAATGCAAACAGAGACT...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAAAGTCTCTGTTTGCATTaGATGGGTCCTTGGTTATCC +
Preference number: 4 (lower is better)
Translates to: FFLHLCWCYEVVCHQQRESLCLH*MGPWLS
Trigger: GGATAACCAAGGACCCATGCAATGCAAACAGAGACT...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACTGTTTAGTCTCTGTTTaGATTGCATGGGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNCLVSV*IAWVLG
Trigger: ACCAAGGACCCATGCAATGCAAACAGAGACTAAACA...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACAAGAATTTTCCCTCTATaGTTCCCTGATACATTCATA +
Preference number: 4 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTRIFPL*FPDTFI
Trigger: TATGAATGTATCAGGGAAGCATAGAGGGAAAATTCT...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCAATTTTCAAATTCAGGTaGAGATCCATGGCAAGTACT +
Preference number: 4 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMAIFKFR*RSMAST
Trigger: AGTACTTGCCATGGATCTGCACCTGAATTTGAAAAT...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TGTACCTATCTGAGGACTAGTTGGGTCCTTCTCAAGTGGGGAAAACCAATTAGAATACTCAAGGGTATATaGCCAGGAACCTCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: CTYLRTSWVLLKWGKPIRILKGI*PGTSKE
Trigger: CTCTTTTGAGGTTCCTGGGCATATACCCTTGAGTAT...TCTAATTGGTTTTCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATAGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp CATAACATAGCAACTATCTTGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTGGCTCTCCATCATTCATaGAGAAACTCTATTTCCTAT +
Preference number: 4 (lower is better)
Translates to: HNIATILSGALVFVAGTVALHHS*RNSISY
Trigger: ATAGGAAATAGAGTTTCTGCATGAATGATGGAGAGC...CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGAGACAAACTCATGTTTaGTGGAGAACAATTAACCTC +
Preference number: 4 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMRQTHV*WRTINL
Trigger: GAGGTTAATTGTTCTCCAGCAAACATGAGTTTGTCT...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTGGGAAGCATTTAAAATaGCAAAGACAAACTCATGTT +
Preference number: 4 (lower is better)
Translates to: GIQCIIIANIPSRHVPETGKHLK*QRQTHV
Trigger: AACATGAGTTTGTCTTTGGCATTTTAAATGCTTCCC...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTAACTATGGTGAATTCTaGCAATTAATTCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GIQCIIIANIPSRHVPETNYGEF*QLIQQV
Trigger: AACCTGCTGAATTAATTGGCAGAATTCACCATAGTT...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTACCGGGCACTTCTGTTaGCTCAGGAGTTATATACAT +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLTGHFC*LRSYIH
Trigger: ATGTATATAACTCCTGAGGCAACAGAAGTGCCCGGT...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATAAGATGACAGAAGAGTaGATCTTCTTCAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHKMTEE*IFFSWT
Trigger: AGTCCAGCTGAAGAAGATCCACTCTTCTGTCATCTT...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACAAGATGACAGAAGAGTaGATCTTCTTCAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNKMTEE*IFFSWT
Trigger: AGTCCAGCTGAAGAAGATCCACTCTTCTGTCATCTT...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATAAAGATGACAGAAGAGTaGATCTTCTTCAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: LYTRLLLQEFKTLGVEYIKMTEE*IFFSWT
Trigger: AGTCCAGCTGAAGAAGATCCACTCTTCTGTCATCTT...TATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCCAGAGACCAAGCTaGGGACAATCCAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYISQRPS*GQSRRN
Trigger: ATTTCTTCTGGATTGTCCCCAGCTTGGTCTCTGGGA...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACATTGACCATAAATaGGTGCAAGGTGTGCATCGG +
Preference number: 4 (lower is better)
Translates to: FSYISVGAMKWFATNRENNIDHK*VQGVHR
Trigger: CCGATGCACACCTTGCACCCATTTATGGTCAATGTT...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTGTGACGATGCTGAGATaGTTGTCATCCGGCTCACAG +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSVTMLR*LSSGSQ
Trigger: CTGTGAGCCGGATGACAACCATCTCAGCATCGTCAC...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGACGAACTTCCGACATaGCACGGTGTTCCTCACACA +
Preference number: 4 (lower is better)
Translates to: TLLLILPKATFSVSLSRDDELPT*HGVPHT
Trigger: TGTGTGAGGAACACCGTGCCATGTCGGAAGTTCGTC...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTGTCCCTTTAGGATTCTaGACAGGCACGGAGTTATTG +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYIVPLGF*TGTELL
Trigger: CAATAACTCCGTGCCTGTCCAGAATCCTAAAGGGAC...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTCTGAGGCCGGTCACTTaGTCCACAAATTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVLRPVT*STNSSW
Trigger: CCAAGAGGAATTTGTGGACCAAGTGACCGGCCTCAG...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATCTGAGGCCGGTCACTTaGTCCACAAATTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TLLLILPKATFSVSLSRDLRPVT*STNSSW
Trigger: CCAAGAGGAATTTGTGGACCAAGTGACCGGCCTCAG...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATATTATTCTTATTTGCACTGAGGCCGGTCACTTaGTCCACAAATTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLQEFKTLGVEYILFLFALRPVT*STNSSW
Trigger: CCAAGAGGAATTTGTGGACCAAGTGACCGGCCTCAG...TGCAAATAAGAATAATATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTCCCAAATCGAAAAGGTaGGGAATAGTCATGAGGTCT +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLPKSKR*GIVMRS
Trigger: AGACCTCATGACTATTCCCCACCTTTTCGATTTGGG...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCCCCAAATCGAAAAGGTaGGGAATAGTCATGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TEFLDVKEDKPKTMLAFGPKSKR*GIVMRS
Trigger: AGACCTCATGACTATTCCCCACCTTTTCGATTTGGG...GCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTCCCAAATCGAAAAGGTaGGGAATAGTCATGAGGTCT +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSPKSKR*GIVMRS
Trigger: AGACCTCATGACTATTCCCCACCTTTTCGATTTGGG...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGTCAGATTGAAGTCTaGAGACTTCTTCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SPLASNASLLPTYPVGMSRQIEV*RLLLFF
Trigger: GAAGAAAAGAAGAAGTCTCCAGACTTCAATCTGACG...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACTTTAACATGTTGCTCTaGGATCCCGTCAGATTGAAG +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNFNMLL*DPVRLK
Trigger: CTTCAATCTGACGGGATCCCAGAGCAACATGTTAAA...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATCATGTTGGACATGCTaGAAATGTTTTTGGCTGACC +
Preference number: 4 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRSCWTC*KCFWLT
Trigger: GGTCAGCCAAAAACATTTCCAGCATGTCCAACATGA...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATTCATGTTGGACATGCTaGAAATGTTTTTGGCTGACC +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHSCWTC*KCFWLT
Trigger: GGTCAGCCAAAAACATTTCCAGCATGTCCAACATGA...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACTCATGTTGGACATGCTaGAAATGTTTTTGGCTGACC +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNSCWTC*KCFWLT
Trigger: GGTCAGCCAAAAACATTTCCAGCATGTCCAACATGA...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACTTGGCCACAAATGTTTaGAGTTCGTTCATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHLATNV*SSFMLS
Trigger: AGACAACATGAACGAACTCCAAACATTTGTGGCCAA...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAATTGGCCACAAATGTTTaGAGTTCGTTCATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHELATNV*SSFMLS
Trigger: AGACAACATGAACGAACTCCAAACATTTGTGGCCAA...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCGTGAATCCTGGCGTATaGAATCCACGGATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SILGIFLYTRLLLQEFKTVNPGV*NPRISS
Trigger: GGAAGAAATCCGTGGATTCCATACGCCAGGATTCAC...GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCTGGGATAGTGAATCCTaGCGTATGGAATCCACGGAT +
Preference number: 4 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFWDSES*RMESTD
Trigger: ATCCGTGGATTCCATACGCCAGGATTCACTATCCCA...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCATGGGATAGTGAATCCTaGCGTATGGAATCCACGGAT +
Preference number: 4 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSWDSES*RMESTD
Trigger: ATCCGTGGATTCCATACGCCAGGATTCACTATCCCA...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGCTCTTTAGGGAGTaGGTCCTATTCTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: TVDSSKGHVFSFFIQRCMGLFRE*VLFSAV
Trigger: AACAGCAGAGAATAGGACCCACTCCCTAAAGAGCCC...CATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACATCTGAAATGTCAGAGTaGGCCATCTCTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTSEMSE*AISSGR
Trigger: TCTTCCAGAAGAGATGGCCCACTCTGACATTTCAGA...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTTTGTCAGGTTCCCTGTaGCACGTGGCCCGATTTGAC +
Preference number: 4 (lower is better)
Translates to: GIWNIGNHNITIGIQCIILSGSL*HVARFD
Trigger: GTCAAATCGGGCCACGTGCCACAGGGAACCTGACAA...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCTGGGGTGGATCTAAGTaGAAACCAGGCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFWGGSK*KPGSFS
Trigger: TGAGAAGGAGCCTGGTTTCCACTTAGATCCACCCCA...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTTGCGGAAGTTTTCACTaGGATCCTGGTAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: GIWNIGNHNITIGIQCIICGSFH*DPGRGP
Trigger: CGGACCCCTACCAGGATCCCAGTGAAAACTTCCGCA...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGTCATCCCTGTGGGAGTaGAGGAAAGGGTTATCGGAG +
Preference number: 4 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWSSLWE*RKGLSE
Trigger: CTCCGATAACCCTTTCCTCCACTCCCACAGGGATGA...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTCTGTCATTCACCGCCTaGGATGGCAACGAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSLSFTA*DGNECL
Trigger: CAAACACTCGTTGCCATCCCAGGCGGTGAATGACAG...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATATACACATCATTGTaGCCCCGACTGTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSIYTSL*PRLSLE
Trigger: TTCCAGGGACAGTCGGGGCCACAATGATGTGTATAT...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATTTGAGTGGAAGATTATaGCATGAAGCCGTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHLSGRL*HEAVCK
Trigger: TTTGCACACGGCTTCATGCCATAATCTTCCACTCAA...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCAGATGAGAAAATTACATaGTGGGCTGACCTTAATGGA +
Preference number: 4 (lower is better)
Translates to: EPNFLISCTCQSHYSADADEKIT*WADLNG
Trigger: TCCATTAAGGTCAGCCCACCATGTAATTTTCTCATC...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTTCTTTAGGGGAGCCTaGAGTTCTTGGGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVFFRGA*SSWGEP
Trigger: AGGCTCACCCCAAGAACTCCAGGCTCCCCTAAAGAA...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGAGTTATGGTTACTCTaGGAGGGAAGGGGTAACAGA +
Preference number: 4 (lower is better)
Translates to: RANNNNNKIPPYIFFLLAELWLL*EGRGNR
Trigger: TCTGTTACCCCTTCCCTCCCAGAGTAACCATAACTC...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGTTCCTACATCTCTGTTaGTGCTATGAAGTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQFLHLC*CYEVVC
Trigger: GCAAACCACTTCATAGCACCAACAGAGATGTAGGAA...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATTCCTACATCTCTGTTaGTGCTATGAAGTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRFLHLC*CYEVVC
Trigger: GCAAACCACTTCATAGCACCAACAGAGATGTAGGAA...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCGAGGAAACCAGGAAATaGCCAGGCGAGTCTACATTA +
Preference number: 4 (lower is better)
Translates to: SILGIFLYTRLLLQEFKTEETRK*PGESTL
Trigger: TAATGTAGACTCGCCTGGCCATTTCCTGGTTTCCTC...GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535259.6
CDS-3UTR CCA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCATTTAGGATCAGATGTTaGGGTGACTATTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: RANNNNNKIPPYIFFLLAFRIRC*GDYSGP
Trigger: GGGCCCAGAATAGTCACCCCAACATCTGATCCTAAA...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAAAAGGCTACACAGTCATaGAGATTCAGATTTAGGATC +
Preference number: 4 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHEKATQS*RFRFRI
Trigger: GATCCTAAATCTGAATCTCCATGACTGTGTAGCCTT...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTGGGTGGATTAAGGTCTaGAATGCACTGGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVGWIKV*NALEGQ
Trigger: CTGCCCTTCCAGTGCATTCCAGACCTTAATCCACCC...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTAGACTCATGAGGAAATaGAGGCGATCCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSRLMRK*RRSLLG
Trigger: CCCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCT...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACAGACTCATGAGGAAATaGAGGCGATCCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYRLMRK*RRSLLG
Trigger: CCCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCT...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTTCACCAAAAAGAGATaGGGTATCTGGAAAGGTCTA +
Preference number: 4 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSFTKKR*GIWKGL
Trigger: TAGACCTTTCCAGATACCCCATCTCTTTTTGGTGAA...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTATGGGTAGGTCTTTCTaGGGCAAGTGGCAAAAACAA +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSMGRSF*GKWQKQ
Trigger: TTGTTTTTGCCACTTGCCCCAGAAAGACCTACCCAT...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCAAATTCAAAGAAGCATaGGTAGGTCTTTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: EAVCKRANNNNNKIPPYIKFKEA*VGLSGA
Trigger: TGCCCCAGAAAGACCTACCCATGCTTCTTTGAATTT...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTGATACATTCATACCCTaGTGTATCAGAAGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPDTFIP*CIRRVL
Trigger: AAGAACCCTTCTGATACACCAGGGTATGAATGTATC...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCAATGTTTTCGTATTTCTaGATCTTCGCTCTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMAMFSYF*IFALCS
Trigger: TGAGCAAAGAGCGAAGATCCAGAAATACGAAAACAT...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTTACGTAAGTGGTCATaGCCCCAGAGCTTTTCTACA +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSLRKWS*PQSFST
Trigger: TGTAGAAAAGCTCTGGGGCCATGACCACTTACGTAA...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATAAACATTTACGTAAGTaGTCATGGCCCCAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: CTSYRSQYTYGCWCMSPHKHLRK*SWPQSF
Trigger: AAAGCTCTGGGGCCATGACCACTTACGTAAATGTTT...ATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAAAGATACCTTCTCCTCTaGAATCGCTCTCAACAGTGT +
Preference number: 4 (lower is better)
Translates to: FFLHLCWCYEVVCHQQRERYLLL*NRSQQC
Trigger: ACACTGTTGAGAGCGATTCCAGAGGAGAAGGTATCT...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674742.1
3UTR CAA 72 bp AAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTaGCACATGTCAATCGCACTACAGTGCAGATGCATT +
Preference number: 4 (lower is better)
Translates to: KLKLLRAKLPNL*HMSIALQCRCI
Trigger: AATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp AGTCCCGTAAGTAAACACATAACATTCTGCATTTTCAGTGCGTATTTCCAACAAAGGAAGTGTCCAGTGTaGTCACATTCTGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: SPVSKHITFCIFSAYFQQRKCPV*SHSACP
Trigger: GGGACATGCAGAATGTGATCACACTGGACACTTCCT...TTGTTGGAAATACGCACTGAAAATGCAGAATGTTATGTGTTTACTTACGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR TCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGAAACTCTTTTGGGATaGGCTCCGTGTTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TLLLILPKATFSVSLSRDETLLG*APCSQR
Trigger: TCTCTGGGAACACGGAGCTCATCCCAAAAGAGTTTC...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CATTCTGCATTTTCAGTGCGTATTTCCAACAATGAGTATGTAAGCAAGCAAACAGAAACTCTTTTGGGATaGGCTCCGTGTTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: HSAFSVRISNNEYVSKQTETLLG*APCSQR
Trigger: TCTCTGGGAACACGGAGCTCATCCCAAAAGAGTTTC...TGTTTGCTTGCTTACATACTCATTGTTGGAAATACGCACTGAAAATGCAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR TCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTGGTGCCATTACTTCTTaGAACCATGACACTGATTCC +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYIGAITS*NHDTDS
Trigger: GGAATCAGTGTCATGGTTTCAAGAAGTAATGGCACC...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTCCCATACAGATACCATaGTCTTGCTGGTGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSPIQIP*SCWWSL
Trigger: AAGGGACCACCAGCAAGATCATGGTATCTGTATGGG...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCCCCATACAGATACCATaGTCTTGCTGGTGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFPIQIP*SCWWSL
Trigger: AAGGGACCACCAGCAAGATCATGGTATCTGTATGGG...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATAGAAACTTTTTGTCACTaGGGCCGGTCACTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGIETFCH*GRSLGP
Trigger: TGGACCAAGTGACCGGCCTCAGTGACAAAAAGTTTC...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAAAGGACCTGTTGTCTaGGTACATCAAATTCCCCTT +
Preference number: 4 (lower is better)
Translates to: FSYISVGAMKWFATNRENKGPVV*VHQIPL
Trigger: AAGGGGAATTTGATGTACTCAGACAACAGGTCCTTT...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TTGCCCACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGCCTTGTCTTTCAAGGTaGAGTGCTTGGAGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: LPTCKKIILTKQNAHHEEPCLSR*SAWSRV
Trigger: AACTCTACTCCAAGCACTTCACCTTGAAAGACAAGG...CTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGTGGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTTGTCTTTCAAGGTaGAGTGCTTGGAGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLPCLSR*SAWSRV
Trigger: AACTCTACTCCAAGCACTTCACCTTGAAAGACAAGG...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp ACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAGAAAGGGTTACCTGTCTCCTaGAGCATCTGGTCTTCATCG +
Preference number: 4 (lower is better)
Translates to: TCKKIILTKQNAHHEEKKGLPVS*SIWSSS
Trigger: CGATGAAGACCAGATGCTTCAGGAGACAGGTAACCC...TTTCTTCTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR TCA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAATGGAAGATTATGGCATaGAGCCGTGTGCAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAEWKIMA*SRVQKS
Trigger: GCTCTTTTGCACACGGCTTCATGCCATAATCTTCCA...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCAGTTTGGGGTGGAAGTaGGTGTCCAACAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFSLGWK*VSNRIS
Trigger: AGAAATTCTGTTGGACACTCACTTCCACCCCAAACT...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTAGTTTGGGGTGGAAGTaGGTGTCCAACAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLSLGWK*VSNRIS
Trigger: AGAAATTCTGTTGGACACTCACTTCCACCCCAAACT...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp ACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGTCTCTGTTGGTGCTATaGAGTGGTTTGCCACCAACA +
Preference number: 4 (lower is better)
Translates to: TVDSSKGHVFSFFIQRCMSLLVL*SGLPPT
Trigger: TGTTGGTGGCAAACCACTTCATAGCACCAACAGAGA...CATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATTCTTTTTGCAAAGACTaGACTGACTTAGATGACCTT +
Preference number: 4 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHSFCKD*TDLDDL
Trigger: AAGGTCATCTAAGTCAGTTCAGTCTTTGCAAAAAGA...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTGCCAGCTCAGAGCATTaGAACCATAAGTGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSASSEH*NHKWPK
Trigger: CTTAGGCCACTTATGGTTTCAATGCTCTGAGCTGGC...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp ACAGATGGCATTGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCAACAATGTATAGGGATTaGATGGGAAACAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: TDGIVLLTDHSTHTAVGATMYRD*MGNSNC
Trigger: GCAGTTACTGTTTCCCATTCAATCCCTATACATTGT...TGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACAATGCCATCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp TGTACCTATCTGAGGACTAGTTGGGTCCTTCTCAAGTGGGGAAAACCAATTAGATATCAAGTGGCAAGCTaGCCTCATCTGATACAATTA +
Preference number: 4 (lower is better)
Translates to: CTYLRTSWVLLKWGKPIRYQVAS*PHLIQL
Trigger: TAATTGTATCAGATGAGGTCAGCTTGCCACTTGATA...TCTAATTGGTTTTCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATAGGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGGCATACCCACACACATaGGAGCATGTACTATGTATA +
Preference number: 4 (lower is better)
Translates to: PPTERITQKGEIACLTKLAYPHT*EHVLCI
Trigger: TATACATAGTACATGCTCTCATGTGTGTGGGTATGC...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACGAGAGTTGCATGCTTTaGAATACAACCCCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYESCML*NTTPRE
Trigger: TTCTCTGGGGGTTGTATTTCAAAGCATGCAACTCTC...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp TACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGTTATGGTGTTTTGGCAGGGGAATaGACAAGATTAAGATTCATA +
Preference number: 4 (lower is better)
Translates to: YTANWTPPWLFGNGTSYGVLAGE*TRLRFI
Trigger: TATGAATCTTAATCTTGTTCATTCCCCTGCCAAAAC...ACCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGTTGACCATAAATGGGTaGAAGGTGTGCATCGGGACC +
Preference number: 4 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWLTING*KVCIGT
Trigger: GGTCCCGATGCACACCTTGCACCCATTTATGGTCAA...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCTATGGTTCTCCCACTTaGCCACCTTTTCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFYGSPT*PPFPIP
Trigger: GGGAATGGGAAAAGGTGGGCAAGTGGGAGAACCATA...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTCTTGTAATTCAAGACTaGGGCATCGTAGATGAAAGC +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLLVIQD*GIVDES
Trigger: GCTTTCATCTACGATGCCGCAGTCTTGAATTACAAG...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCAGTTCATGTTGGACATaGTGGAAATGTTTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: QQNTSLHLLPLSRALLDISSCWT*WKCFWL
Trigger: CAGCCAAAAACATTTCCAGCATGTCCAACATGAACT...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AATGACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTGGGTCCTATTCTCTaGTGTTGCCTCATCCCTCTG +
Preference number: 4 (lower is better)
Translates to: NDKYFEEFFLHLCWCYEVVGPIL*CCLIPL
Trigger: CAGAGGGATGAGGCAACAGCAGAGAATAGGACCCAC...CACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATTGGTTTTCAGGTAGGTaGGCTCGACCTCACTACAGT +
Preference number: 4 (lower is better)
Translates to: TLLLILPKATFSVSLSRDWFSGR*ARPHYS
Trigger: ACTGTAGTGAGGTCGAGCGCACCTACCTGAAAACCA...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCAGCCCCTCTTCATTATaGAAGGGGTTCCGGTTCATT +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFSPSSL*KGFRFI
Trigger: AATGAACCGGAACCCCTTGCATAATGAAGAGGGGCT...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TTTCACAACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCAAGGGCATTGTTCTGTaGCCAGTCCTGCTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: FHNITVDSSKGHVFSFFIKGIVL*PVLLVD
Trigger: GTCTACCAGCAGGACTGGGCACAGAACAATGCCCTT...GATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTCTGGCAAGAGAGACTTaGTCCTCTTGCTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GIWNIGNHNITIGIQCIILARET*SSCCPP
Trigger: TGGAGGACAGCAAGAGGAGCAAGTCTCTCTTGCCAG...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTTGTACACGCGTCTATTaGTGCAGGAATTTAAAACCC +
Preference number: 4 (lower is better)
Translates to: NPDLRKCHNIATILSGALCTRVY*CRNLKP
Trigger: GGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACA...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp ACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCCTATAGATGGCATGAAGCCGTGTaGAAAAGAGCCAACAACAAC +
Preference number: 4 (lower is better)
Translates to: TSNIYPPEHWPLRIFPYRWHEAV*KRANNN
Trigger: GTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCA...TCTATAGGGAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTATCTGGTGTCTGCCATaGTCAGCACACACCTCACAA +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSIWCLP*SAHTSQ
Trigger: TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGAT...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACATCTGGTGTCTGCCATaGTCAGCACACACCTCACAA +
Preference number: 4 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYIWCLP*SAHTSQ
Trigger: TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGAT...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GGAAGATTTTTAAACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTATCTGGTGTCTGCCATaGTCAGCACACACCTCACAA +
Preference number: 4 (lower is better)
Translates to: GRFLNIRFDTRHFLVHASIWCLP*SAHTSQ
Trigger: TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGAT...AGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTTTAAAAATCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGGCACTACAGTGCAGATaGATTCTTAACTGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVALQCR*ILNCFY
Trigger: ATAAAAACAGTTAAGAATGCATCTGCACTGTAGTGC...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACTCAATCGCACTACAGTaGAGATGCATTCTTAACTGT +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNSIALQ*RCILNC
Trigger: ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGA...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACAACTTCCTAATCTCTTaGACATGTCAATCGCACTAC +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNNFLIS*TCQSHY
Trigger: GTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTT...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTACGAACACACTGATTTaGTATTCTTTAGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSTNTLI*YSLGEP
Trigger: AGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGT...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAACGAACACACTGATTTaGTATTCTTTAGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: NIRFDTRHFLVHASIAAGTNTLI*YSLGEP
Trigger: AGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGT...TCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535259.6
ENST00000675398.1
CDS-3UTR GCA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGAAATGTGTTAGTTTATaGAGCTCTGAACAAGACCAT +
Preference number: 4 (lower is better)
Translates to: SRALLDIQHLPSRTLAITKCVSL*SSEQDH
Trigger: ATGGTCTTGTTCAGAGCTGCATAAACTAACACATTT...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAATTGGTTGCATGTGCGTaGTATTACCCATGGACAGAG +
Preference number: 4 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAELVACA*YYPWTE
Trigger: CTCTGTCCATGGGTAATAGCACGCACATGCAACCAA...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAATATTTCAATGGTCACTaGCAGCCTTTTATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHEYFNGH*QPFIFS
Trigger: ACTGAAGATAAAAGGCTGGCAGTGACCATTGAAATA...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAACTTTTGCCATCTCTTTaGCCCGTTTTCTCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAELLPSL*PVFSLG
Trigger: CCCTAGAGAGAAAACGGGGCAAAGAGATGGCAAAAG...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATTCACATTCTAGGATATaGCTAGAATATCGCCTACAC +
Preference number: 4 (lower is better)
Translates to: RALLDIQHLPSRTLAITYSHSRI*LEYRLH
Trigger: GTGTAGGCGATATTCTAGGCATATCCTAGAATGTGA...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAACCCCCAGAGAAGAAATaGTATTGGTCAAATCGTTCT +
Preference number: 4 (lower is better)
Translates to: FFLHLCWCYEVVCHQQREPPEKK*YWSNRS
Trigger: AGAACGATTTGACCAATAGCATTTCTTCTCTGGGGG...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTAGACAAACTCATGTTTaGTGGAGAACAATTAACCTC +
Preference number: 4 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSRQTHV*WRTINL
Trigger: GAGGTTAATTGTTCTCCAGCAAACATGAGTTTGTCT...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGGGAAGCATTTAAAATaGCAAAGACAAACTCATGTT +
Preference number: 4 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMGKHLK*QRQTHV
Trigger: AACATGAGTTTGTCTTTGGCATTTTAAATGCTTCCC...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATGGATCTTCGCTCTTTaGTCAGTTATCAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: EPNFLISCTCQSHYSADAWIFAL*SVINSL
Trigger: AAGACTATTGATAACTGAGCAAAGAGCGAAGATCCA...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TCTGCATTTTCAGTGCGTATTTCCAACAATGAGTATGTAAGCAAGCAAACAATGATGGACGCTCCAAACTaGAAGAAGGTAGACGTCGGA +
Preference number: 4 (lower is better)
Translates to: SAFSVRISNNEYVSKQTMMDAPN*KKVDVG
Trigger: TCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCAT...CATTGTTTGCTTGCTTACATACTCATTGTTGGAAATACGCACTGAAAATGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR CCA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATACGATGGAAACTCTTTTaGGATGAGCTCCGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGIRWKLF*DELRVP
Trigger: GGGAACACGGAGCTCATCCCAAAAGAGTTTCCATCG...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTTCACAACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCGACGAACTTCCGACATaGCACGGTGTTCCTCACACA +
Preference number: 4 (lower is better)
Translates to: FHNITVDSSKGHVFSFFIDELPT*HGVPHT
Trigger: TGTGTGAGGAACACCGTGCCATGTCGGAAGTTCGTC...GATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGCCATGCTTCCCATTaGTCACCAGATAGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: LLLILPKATFSVSLSRDVCHASH*SPDRGR
Trigger: ACGACCTCTATCTGGTGACCAATGGGAAGCATGGCA...TACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCTGCCATGCTTCCCATTaGTCACCAGATAGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFCHASH*SPDRGR
Trigger: ACGACCTCTATCTGGTGACCAATGGGAAGCATGGCA...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTCTGAGGCCGGTCACTTaGTCCACAAATTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GIWNIGNHNITIGIQCIILRPVT*STNSSW
Trigger: CCAAGAGGAATTTGTGGACCAAGTGACCGGCCTCAG...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATATTCCATAACCGGTGGTaGCAAAGATGTACCCACTCC +
Preference number: 4 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGIFHNRW*QRCTHS
Trigger: GGAGTGGGTACATCTTTGCCACCACCGGTTATGGAA...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCAATTCCATAACCGGTaGTGGCAAAGATGTACCCAC +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFQFHNR*WQRCTH
Trigger: GTGGGTACATCTTTGCCACCACCGGTTATGGAATTG...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATCGTCAGATTGAAGTCTaGAGACTTCTTCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: RALLDIQHLPSRTLAITYRQIEV*RLLLFF
Trigger: GAAGAAAAGAAGAAGTCTCCAGACTTCAATCTGACG...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GGGTATTTGGAGGCCACTGACCTTTTAAAGTTGTCCTTGGTTTTGTGGTTCTTATGCTGGAAATGTTTTTaGCTGACCGGAGGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: GYLEATDLLKLSLVLWFLCWKCF*LTGGVL
Trigger: TAAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCA...TAAGAACCACAAAACCAAGGACAACTTTAAAAGGTCAGTGGCCTCCAAATACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTATGAGGGAACCTCTTTaGATGAAGTCAGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYIMREPL*MKSAAL
Trigger: AAGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCAT...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCGGGCTCTTTAGGGAGTaGGTCCTATTCTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFGLFRE*VLFSAV
Trigger: AACAGCAGAGAATAGGACCCACTCCCTAAAGAGCCC...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GGAAGATTTTTAAACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTGTGGGCCATCTCTTCTaGAAGATACCTAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: GRFLNIRFDTRHFLVHASVGHLF*KIPRAL
Trigger: AAGAGCCCTAGGTATCTTCCAGAAGAGATGGCCCAC...AGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTTTAAAAATCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp TTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTGGATCTAAGTaGAAACCAGGCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LLLILPKATFSVSLSRDVWGGSK*KPGSFS
Trigger: TGAGAAGGAGCCTGGTTTCCACTTAGATCCACCCCA...TACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AGCATAAGGCATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCACATTTTCAACAAACTaGGGTGGATCTAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SIRHNMLRNIHIIVAPTVTFSTN*GGSKWK
Trigger: TTTCCACTTAGATCCACCCCAGTTTGTTGAAAATGT...GACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCACATTTTCAACAAACTaGGGTGGATCTAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SPLASNASLLPTYPVGMSTFSTN*GGSKWK
Trigger: TTTCCACTTAGATCCACCCCAGTTTGTTGAAAATGT...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATATCGGAGGTGTGGTCTaGCAAGAGAGACTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: FGLTTNHSSVFWEDFLIHIGGVV*QERLAP
Trigger: AGGAGCAAGTCTCTCTTGCCAGACCACACCTCCGAT...ATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGTACCCTCCAGAACATTaGCCATTACGTATATTTCCC +
Preference number: 4 (lower is better)
Translates to: PPTERITQKGEIACLTKLYPPEH*PLRIFP
Trigger: GGGAAATATACGTAATGGCCAATGTTCTGGAGGGTA...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATGATGAGAAAATTACATaGTGGGCTGACCTTAATGGA +
Preference number: 4 (lower is better)
Translates to: RALLDIQHLPSRTLAITYDEKIT*WADLNG
Trigger: TCCATTAAGGTCAGCCCACCATGTAATTTTCTCATC...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTGTACTTTCCCAAAGATaGAGCTATTCCATGCATCCT +
Preference number: 4 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLVLSQR*SYSMHP
Trigger: AGGATGCATGGAATAGCTCCATCTTTGGGAAAGTAC...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTGTACTTTCCCAAAGATaGAGCTATTCCATGCATCCT +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSVLSQR*SYSMHP
Trigger: AGGATGCATGGAATAGCTCCATCTTTGGGAAAGTAC...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAGAAAGGGTGGATTAAGGTCTaGAATGCACTGGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TCKKIILTKQNAHHEEKKGWIKV*NALEGQ
Trigger: CTGCCCTTCCAGTGCATTCCAGACCTTAATCCACCC...TTTCTTCTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GGTAGAGTACATATTATTCTTATTTGCAGCATAAGGCATAACATGCTCCGAAATAGACTCATGAGGAAATaGAGGCGATCCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GRVHIILICSIRHNMLRNRLMRK*RRSLLG
Trigger: CCCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCT...ATTTCGGAGCATGTTATGCCTTATGCTGCAAATAAGAATAATATGTACTCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535259.6
CDS-3UTR CCA 90 bp TTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATAGACTCATGAGGAAATaGAGGCGATCCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FGLTTNHSSVFWEDFLIHRLMRK*RRSLLG
Trigger: CCCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCT...ATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCGACAGAAAGCCTCTTTaGCTTGACGACAAATCACTC +
Preference number: 4 (lower is better)
Translates to: SILGIFLYTRLLLQEFKTDRKPL*LDDKSL
Trigger: GAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCTGTC...GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535259.6
CDS-3UTR CCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACTTACTTCTCATACTGTaGGTTCCATTTACCACTGGA +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNLLLIL*VPFTTG
Trigger: TCCAGTGGTAAATGGAACCCACAGTATGAGAAGTAA...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAAATCAAGAGTAATCCGTaGATGCCCAGTCATGGTGCT +
Preference number: 4 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAEIKSNP*MPSHGA
Trigger: AGCACCATGACTGGGCATCCACGGATTACTCTTGAT...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAACCTTATGGGGATCTCTaGCTCTTATTCCAGAGCTAC +
Preference number: 4 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAEPYGDL*LLFQSY
Trigger: GTAGCTCTGGAATAAGAGCCAGAGATCCCCATAAGG...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGACCAGGGCAGCCTTATaGGGATCTCTGGCTCTTATT +
Preference number: 4 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWTRAAL*GSLALI
Trigger: AATAAGAGCCAGAGATCCCCATAAGGCTGCCCTGGT...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATGTGAGTGTGTTCACCTaGTTAGCAGCTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: FGLTTNHSSVFWEDFLIHVSVFT*LAAPGS
Trigger: AGACCCAGGAGCTGCTAACCAGGTGAACACACTCAC...ATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGACAGCAGTAGGCACTTaGAACTTGATAAAGAATTTT +
Preference number: 4 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMTAVGT*NLIKNF
Trigger: AAAATTCTTTATCAAGTTCCAAGTGCCTACTGCTGT...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTCAACATTTTAATAGCTaGTCCTCAATCATTCTGACT +
Preference number: 4 (lower is better)
Translates to: NASLLPTYPVGMSRRLALQHFNS*SSIILT
Trigger: AGTCAGAATGATTGAGGACCAGCTATTAAAATGTTG...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCAACATTAGGCCATTCTaGGTACCTATAAAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFNIRPF*VPIKPG
Trigger: ACCGGGCTTTATAGGTACCCAGAATGGCCTAATGTT...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CAA 72 bp AAGCCAGCTGAAACTCAGGCATTTGTGTTCAGAAATTaGGGCTCCTTGACATCAACAAATCTAAGAACTCAG +
Preference number: 4 (lower is better)
Translates to: KPAETQAFVFRN*GSLTSTNLRTQ
Trigger: CTGAGTTCTTAGATTTGTTGATGTCAAGGAGCCCAAATTTCTGAACACAAATGCCTGAGTTTCAGCTGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp AGTCCCGTAAGTAAACACATAACATTCTGCATTTTCAGTGCGTATTTCCAACAACGTAGGAGACAGAAATaGGTCCCGATGGAAACTCTT +
Preference number: 4 (lower is better)
Translates to: SPVSKHITFCIFSAYFQQRRRQK*VPMETL
Trigger: AAGAGTTTCCATCGGGACTCATTTCTGTCTCCTACG...TTGTTGGAAATACGCACTGAAAATGCAGAATGTTATGTGTTTACTTACGGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR TCA 90 bp GGTAGAGTACATATTATTCTTATTTGCAGCATAAGGCATAACATGCTCCGAAATGAAACTTTTTGTCACTaGGGCCGGTCACTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GRVHIILICSIRHNMLRNETFCH*GRSLGP
Trigger: TGGACCAAGTGACCGGCCTCAGTGACAAAAAGTTTC...ATTTCGGAGCATGTTATGCCTTATGCTGCAAATAAGAATAATATGTACTCTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR TCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCAAATTCCCCTTATCTaGAACCATGTCCATGATGAG +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYQIPLI*NHVHDE
Trigger: CTCATCATGGACATGGTTTCAGATAAGGGGAATTTG...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTAAAGGACCTGTTGTCTaGGTACATCAAATTCCCCTT +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLKGPVV*VHQIPL
Trigger: AAGGGGAATTTGATGTACTCAGACAACAGGTCCTTT...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCGGAATACATAGTTATTaGGGTTATCCTTCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: SILGIFLYTRLLLQEFKTGIHSY*GYPSAG
Trigger: ACCGGCAGAAGGATAACCTCAATAACTATGTATTCC...GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR TCA 90 bp ACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCCTATAGACCTTGTCTTTCAAGGTaGAGTGCTTGGAGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: TSNIYPPEHWPLRIFPYRPCLSR*SAWSRV
Trigger: AACTCTACTCCAAGCACTTCACCTTGAAAGACAAGG...TCTATAGGGAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TGTACCTATCTGAGGACTAGTTGGGTCCTTCTCAAGTGGGGAAAACCAATTAGAGATGTGTCTTGGAAATaGACTATAATGAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: CTYLRTSWVLLKWGKPIRDVSWK*TIMKVA
Trigger: TGCTACCTTCATTATAGTTCATTTCCAAGACACATC...TCTAATTGGTTTTCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATAGGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCATATTCCATGCATCCTTaGGCTTTAAGGGAATCATCC +
Preference number: 4 (lower is better)
Translates to: RANNNNNKIPPYIFFLLAYSMHP*ALRESS
Trigger: GGATGATTCCCTTAAAGCTCAAGGATGCATGGAATA...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCACCCTCTGTCTCCCTATaGTTGACCCTGAAATTTATT +
Preference number: 4 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSPSVSL*LTLKFI
Trigger: AATAAATTTCAGGGTCAATCATAGGGAGACAGAGGG...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTTTTCAACCTTTTCTTaGGGCACATGTCATAATGCA +
Preference number: 4 (lower is better)
Translates to: CTSYRSQYTYGCWCMSPHFSTFS*GTCHNA
Trigger: TGCATTATGACATGTGCCTCAAGAAAAGGTTGAAAA...ATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTCCTCGCCATCCTTCCTaGAATACACCTCTATTCCTT +
Preference number: 4 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVPRHPS*NTPLFL
Trigger: AAGGAATAGAGGTGTATTTCAGGAAGGATGGCGAGG...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCCTAAGTGCAAGCATATaGAAGGGAGACACAAACAGT +
Preference number: 4 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFLSASI*KGDTNS
Trigger: ACTGTTTGTGTCTCCCTTTCATATGCTTGCACTTAG...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCACTAAGTGCAAGCATATaGAAGGGAGACACAAACAGT +
Preference number: 4 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSLSASI*KGDTNS
Trigger: ACTGTTTGTGTCTCCCTTTCATATGCTTGCACTTAG...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATAACTGGAAGAGGTCATaGCCCAGGGCTAATGAAGAA +
Preference number: 4 (lower is better)
Translates to: TLLLILPKATFSVSLSRDNWKRS*PRANEE
Trigger: TTCTTCATTAGCCCTGGGTCATGACCTCTTCCAGTT...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp TGTACCTATCTGAGGACTAGTTGGGTCCTTCTCAAGTGGGGAAAACCAATTAGATCTTTCCTAAAGGTGTaGAAGAGAATTAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: CTYLRTSWVLLKWGKPIRSFLKV*KRINWK
Trigger: CTTCCAGTTAATTCTCTTTCACACCTTTAGGAAAGA...TCTAATTGGTTTTCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATAGGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCTTAACCTCATTAATTTaGAAGGCAGCTGTGGTATTG +
Preference number: 4 (lower is better)
Translates to: QQNTSLHLLPLSRALLDILTSLI*KAAVVL
Trigger: CAATACCACAGCTGCCTTTCAAATTAATGAGGTTAA...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp CGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGATTAACCTCATTAATTTaGAAGGCAGCTGTGGTATTG +
Preference number: 4 (lower is better)
Translates to: RRHKCVSLCSSEQDHRSRLTSLI*KAAVVL
Trigger: CAATACCACAGCTGCCTTTCAAATTAATGAGGTTAA...TCGGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCTACTGTTCATTCACTTaGATTAGCTTGACTGAGAAC +
Preference number: 4 (lower is better)
Translates to: QQNTSLHLLPLSRALLDIYCSFT*ISLTEN
Trigger: GTTCTCAGTCAAGCTAATTCAAGTGAATGAACAGTA...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp TGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTACTGTTCATTCACTTaGATTAGCTTGACTGAGAAC +
Preference number: 4 (lower is better)
Translates to: CTSYRSQYTYGCWCMSPHYCSFT*ISLTEN
Trigger: GTTCTCAGTCAAGCTAATTCAAGTGAATGAACAGTA...ATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACGTTTTGGCAGGGGAATaGACAAGATTAAGATTCATA +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNVLAGE*TRLRFI
Trigger: TATGAATCTTAATCTTGTTCATTCCCCTGCCAAAAC...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTCATTTTTACACCATATaGCCGGGCACTTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSHFYTI*PGTSVA
Trigger: GGCAACAGAAGTGCCCGGTCATATGGTGTAAAAATG...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp CATTCTGCATTTTCAGTGCGTATTTCCAACAATGAGTATGTAAGCAAGCAAACAAGTGTGATCACATTCTaGATGTCCCAGCCCACAAAG +
Preference number: 4 (lower is better)
Translates to: HSAFSVRISNNEYVSKQTSVITF*MSQPTK
Trigger: CTTTGTGGGCTGGGACATGCAGAATGTGATCACACT...TGTTTGCTTGCTTACATACTCATTGTTGGAAATACGCACTGAAAATGCAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR GCA 90 bp TTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTATGGTTCTCCCACTTaGCCACCTTTTCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: FGLTTNHSSVFWEDFLIHYGSPT*PPFPIP
Trigger: GGGAATGGGAAAAGGTGGGCAAGTGGGAGAACCATA...ATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCAATGCAGAACCCCTTaGAGCATTTCTTCACATTCA +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLQCRTP*SISSHS
Trigger: TGAATGTGAAGAAATGCTGCAAGGGGTTCTGCATTG...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAACAGAAGGTGAGACGGTaGCATTACTTCTTGAAACCA +
Preference number: 4 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAEQKVRR*HYFLKP
Trigger: TGGTTTCAAGAAGTAATGGCACCGTCTCACCTTCTG...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTTGTAATTCAAGACTaGGGCATCGTAGATGAAAGC +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYLVIQD*GIVDES
Trigger: GCTTTCATCTACGATGCCGCAGTCTTGAATTACAAG...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAGTTCATGTTGGACATaGTGGAAATGTTTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: FSYISVGAMKWFATNRENSSCWT*WKCFWL
Trigger: CAGCCAAAAACATTTCCAGCATGTCCAACATGAACT...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTAGCCCCTCTTCATTATaGAAGGGGTTCCGGTTCATT +
Preference number: 4 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVSPSSL*KGFRFI
Trigger: AATGAACCGGAACCCCTTGCATAATGAAGAGGGGCT...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCATGTACACGCGTCTATTaGTGCAGGAATTTAAAACCC +
Preference number: 4 (lower is better)
Translates to: RANNNNNKIPPYIFFLLACTRVY*CRNLKP
Trigger: GGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACA...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCATGTCCCGGAGACTTaGCCTTATGTAGTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLHVPET*PYVVSY
Trigger: ATAACTAACTACATAAGGGCAAGTCTCCGGGACATG...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAACCATTGGCATCCAATaGATCATTATTGCCAACATA +
Preference number: 4 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQTIGIQ*IIIANI
Trigger: TATGTTGGCAATAATGATGCATTGGATGCCAATGGT...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGAACCATTGGCATCCAATaGATCATTATTGCCAACATA +
Preference number: 4 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRTIGIQ*IIIANI
Trigger: TATGTTGGCAATAATGATGCATTGGATGCCAATGGT...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAAAACTTCCTAATCTCTTaGACATGTCAATCGCACTAC +
Preference number: 4 (lower is better)
Translates to: FFLHLCWCYEVVCHQQRENFLIS*TCQSHY
Trigger: GTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTT...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAAAAATGTGTTAGTTTATaGAGCTCTGAACAAGACCAT +
Preference number: 4 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHEKCVSL*SSEQDH
Trigger: ATGGTCTTGTTCAGAGCTGCATAAACTAACACATTT...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATATGGGAAACAGTAACTaGATATTGGGAGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: CTSYRSQYTYGCWCMSPHMGNSN*ILGELF
Trigger: GAAAAGTTCTCCCAATATGCAGTTACTGTTTCCCAT...ATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATGGGAAACAGTAACTaGATATTGGGAGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: RALLDIQHLPSRTLAITYMGNSN*ILGELF
Trigger: GAAAAGTTCTCCCAATATGCAGTTACTGTTTCCCAT...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTATTTTCAAATTCAGGTaGAGATCCATGGCAAGTACT +
Preference number: 4 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLIFKFR*RSMAST
Trigger: AGTACTTGCCATGGATCTGCACCTGAATTTGAAAAT...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCATACTCAAGGGTATATaGCCAGGAACCTCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFILKGI*PGTSKE
Trigger: CTCTTTTGAGGTTCCTGGGCATATACCCTTGAGTAT...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATCCCTGGAGAGTTGCATaGTTTGAAATACAACCCCCA +
Preference number: 4 (lower is better)
Translates to: TLLLILPKATFSVSLSRDPWRVA*FEIQPP
Trigger: TGGGGGTTGTATTTCAAAGCATGCAACTCTCCAGGG...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTCCCAGAGACCAAGCTaGGGACAATCCAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVSQRPS*GQSRRN
Trigger: ATTTCTTCTGGATTGTCCCCAGCTTGGTCTCTGGGA...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GGAAGATTTTTAAACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTTCCCAGAGACCAAGCTaGGGACAATCCAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: GRFLNIRFDTRHFLVHASSQRPS*GQSRRN
Trigger: ATTTCTTCTGGATTGTCCCCAGCTTGGTCTCTGGGA...AGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTTTAAAAATCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp GGTAGAGTACATATTATTCTTATTTGCAGCATAAGGCATAACATGCTCCGAAATTTCCATAACCGGTGGTaGCAAAGATGTACCCACTCC +
Preference number: 4 (lower is better)
Translates to: GRVHIILICSIRHNMLRNFHNRW*QRCTHS
Trigger: GGAGTGGGTACATCTTTGCCACCACCGGTTATGGAA...ATTTCGGAGCATGTTATGCCTTATGCTGCAAATAAGAATAATATGTACTCTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTCGTCAGATTGAAGTCTaGAGACTTCTTCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSRQIEV*RLLLFF
Trigger: GAAGAAAAGAAGAAGTCTCCAGACTTCAATCTGACG...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGTTGAGGAGTTCATGTTaGACATGCTGGAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQLRSSC*TCWKCF
Trigger: AAAACATTTCCAGCATGTCCAACATGAACTCCTCAA...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACTTGAGGAGTTCATGTTaGACATGCTGGAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNLRSSC*TCWKCF
Trigger: AAAACATTTCCAGCATGTCCAACATGAACTCCTCAA...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACAGTCAGCAGCTCTTTTaGGTGAGTCCATTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYSQQLF*VSPFLR
Trigger: CCTCAAGAATGGACTCACCCAAAAGAGCTGCTGACT...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATCTGTCCTCCAGACCTTaGGGGAAAAGGGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: FGLTTNHSSVFWEDFLIHLSSRP*GKRELF
Trigger: AAAAAGCTCCCTTTTCCCCCAAGGTCTGGAGGACAG...ATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTGCCCACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGTTGAGTGGAAGATTATaGCATGAAGCCGTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: LPTCKKIILTKQNAHHEELSGRL*HEAVCK
Trigger: TTTGCACACGGCTTCATGCCATAATCTTCCACTCAA...CTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGTGGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATGAGAAAATTACATGGTaGGCTGACCTTAATGGAATT +
Preference number: 4 (lower is better)
Translates to: RALLDIQHLPSRTLAITYEKITW*ADLNGI
Trigger: AATTCCATTAAGGTCAGCCCACCATGTAATTTTCTC...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACGAGTTATGGTTACTCTaGGAGGGAAGGGGTAACAGA +
Preference number: 4 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYELWLL*EGRGNR
Trigger: TCTGTTACCCCTTCCCTCCCAGAGTAACCATAACTC...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGACCACCATGGCTGTTTaGAAACGGAACGAGTTATGG +
Preference number: 4 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWTTMAV*KRNELW
Trigger: CCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGT...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATTACTTCTCATACTGTaGGTTCCATTTACCACTGGA +
Preference number: 4 (lower is better)
Translates to: FFLHLCWCYEVVCHQQRELLLIL*VPFTTG
Trigger: TCCAGTGGTAAATGGAACCCACAGTATGAGAAGTAA...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp ACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGAATACTCAGACTCTCTaGCATCCTGTGAATCAGGGA +
Preference number: 4 (lower is better)
Translates to: TVDSSKGHVFSFFIQRCMNTQTL*HPVNQG
Trigger: TCCCTGATTCACAGGATGCCAGAGAGTCTGAGTATT...CATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCAAGAGATGGGGTATCTaGAAAGGTCTAATTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LGDINVLVYAALNKTIEAKRWGI*KGLILS
Trigger: AGACAAAATTAGACCTTTCCAGATACCCCATCTCTT...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTTCTCCTAACTTTTaGTGTGGTTCTACGAACTCT +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLPSPNF*CGSTNS
Trigger: AGAGTTCGTAGAACCACACCAAAAGTTAGGAGAAGG...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACCCTTATGGGGATCTCTaGCTCTTATTCCAGAGCTAC +
Preference number: 4 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYPYGDL*LLFQSY
Trigger: GTAGCTCTGGAATAAGAGCCAGAGATCCCCATAAGG...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACAGATACATTCATACCCTaGTGTATCAGAAGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTDTFIP*CIRRVL
Trigger: AAGAACCCTTCTGATACACCAGGGTATGAATGTATC...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGTTATGGTACAGCAGTAGGCACTTaGAACTTGATAAAGAATTTT +
Preference number: 4 (lower is better)
Translates to: YTANWTPPWLFGNGTSYGTAVGT*NLIKNF
Trigger: AAAATTCTTTATCAAGTTCCAAGTGCCTACTGCTGT...ACCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGTTCAACACTCTTCAGTaGGACAGAATAACCGTCATT +
Preference number: 4 (lower is better)
Translates to: PPTERITQKGEIACLTKLFNTLQ*DRITVI
Trigger: AATGACGGTTATTCTGTCCCACTGAAGAGTGTTGAA...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTTTCAACACTCTTCAGTaGGACAGAATAACCGTCATT +
Preference number: 4 (lower is better)
Translates to: PNLLHMSIALQCRCILNCFNTLQ*DRITVI
Trigger: AATGACGGTTATTCTGTCCCACTGAAGAGTGTTGAA...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTACCTATAAAGCCCGGTaGAAGCGTTCCAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVTYKAR*KRSSST
Trigger: TGTTGAACTGGAACGCTTCCACCGGGCTTTATAGGT...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCTTACGTAAGTGGTCATaGCCCCAGAGCTTTTCTACA +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFLRKWS*PQSFST
Trigger: TGTAGAAAAGCTCTGGGGCCATGACCACTTACGTAA...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCAACAGTAGAGCAAGATaGCAGAAGAGTGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFNSRAR*QKSGSS
Trigger: AGAAGATCCACTCTTCTGTCATCTTGCTCTACTGTT...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp TTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTACCTCACAAGATTCCTTaGGTGGAAGATTATGGCATG +
Preference number: 4 (lower is better)
Translates to: LLLILPKATFSVSLSRDVPHKIP*VEDYGM
Trigger: CATGCCATAATCTTCCACTCAAGGAATCTTGTGAGG...TACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTGATGTGTCTTGGAAATaGACTATAATGAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: NPDLRKCHNIATILSGALDVSWK*TIMKVA
Trigger: TGCTACCTTCATTATAGTTCATTTCCAAGACACATC...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp ACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCGATGTGTCTTGGAAATaGACTATAATGAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: TEFLDVKEDKPKTMLAFGDVSWK*TIMKVA
Trigger: TGCTACCTTCATTATAGTTCATTTCCAAGACACATC...GCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp TTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATATTATTCTTATTTGCAAAAGCCTCTTTGGCTTaGCGACAAATCACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LLQEFKTLGVEYILFLFAKASLA*RQITLL
Trigger: CAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTT...TGCAAATAAGAATAATATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535259.6
CDS-3UTR TCA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAAAGAATAAACAATGTGTaGCTATATGACAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: FFLHLCWCYEVVCHQQRERINNV*LYDSCG
Trigger: TCCACAGCTGTCATATAGTCACACATTGTTTATTCT...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACACAATGTATAGGGATTaGATGGGAAACAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYTMYRD*MGNSNC
Trigger: GCAGTTACTGTTTCCCATTCAATCCCTATACATTGT...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACTATCAAGTGGCAAGCTaGCCTCATCTGATACAATTA +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYYQVAS*PHLIQL
Trigger: TAATTGTATCAGATGAGGTCAGCTTGCCACTTGATA...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAGCATTTGATCATCTCTaGTCTATATCAAGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSAFDHL*SISSGK
Trigger: CTTGCCACTTGATATAGATCAGAGATGATCAAATGC...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTGCATTTGATCATCTCTaGTCTATATCAAGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYIAFDHL*SISSGK
Trigger: CTTGCCACTTGATATAGATCAGAGATGATCAAATGC...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTTTTCAACCTTTTCTTaGGGCACATGTCATAATGCA +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSFSTFS*GTCHNA
Trigger: TGCATTATGACATGTGCCTCAAGAAAAGGTTGAAAA...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCAGGTTGAGAAAAACCTaGGCCTCAGTTTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFRLRKT*ASVSLS
Trigger: AGATAAGGAAACTGAGGCTCAGGTTTTTCTCAACCT...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGTCTTTCCTAAAGGTGTaGAAGAGAATTAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: PPTERITQKGEIACLTKLSFLKV*KRINWK
Trigger: CTTCCAGTTAATTCTCTTTCACACCTTTAGGAAAGA...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp AATGACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGAGTGTGATCACATTCTaGATGTCCCAGCCCACAAAG +
Preference number: 4 (lower is better)
Translates to: NDKYFEEFFLHLCWCYEVSVITF*MSQPTK
Trigger: CTTTGTGGGCTGGGACATGCAGAATGTGATCACACT...CACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp ACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCCTATAGATTAACTTTCTTGCCATaGTTCCCATTGGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: TSNIYPPEHWPLRIFPYRLTFLP*FPLVTR
Trigger: TCTGGTGACCAATGGGAAGCATGGCAAGAAAGTTAA...TCTATAGGGAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGGGAGTTTTAACATGTTaGTCTGGGATCCCGTCAGAT +
Preference number: 4 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWGVLTC*SGIPSD
Trigger: ATCTGACGGGATCCCAGAGCAACATGTTAAAACTCC...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TTTCACAACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCAGCCCCTCTTCATTATaGAAGGGGTTCCGGTTCATT +
Preference number: 4 (lower is better)
Translates to: FHNITVDSSKGHVFSFFISPSSL*KGFRFI
Trigger: AATGAACCGGAACCCCTTGCATAATGAAGAGGGGCT...GATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATATTATTCTTATTTGCAACACGCGTCTATTGCTaGAGGAATTTAAAACCCTGG +
Preference number: 4 (lower is better)
Translates to: LLQEFKTLGVEYILFLFATRVYC*RNLKPW
Trigger: CCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGT...TGCAAATAAGAATAATATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp ACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGTGTACACGCGTCTATTaGTGCAGGAATTTAAAACCC +
Preference number: 4 (lower is better)
Translates to: TVDSSKGHVFSFFIQRCMCTRVY*CRNLKP
Trigger: GGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACA...CATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GGTAGAGTACATATTATTCTTATTTGCAGCATAAGGCATAACATGCTCCGAAATTGGCATGAAGCCGTGTaGAAAAGAGCCAACAACAAC +
Preference number: 4 (lower is better)
Translates to: GRVHIILICSIRHNMLRNWHEAV*KRANNN
Trigger: GTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCA...ATTTCGGAGCATGTTATGCCTTATGCTGCAAATAAGAATAATATGTACTCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp TTGCCCACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGTCAATCGCACTACAGTaGAGATGCATTCTTAACTGT +
Preference number: 4 (lower is better)
Translates to: LPTCKKIILTKQNAHHEESIALQ*RCILNC
Trigger: ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGA...CTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGTGGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACTCAATCGCACTACAGTaGAGATGCATTCTTAACTGT +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYSIALQ*RCILNC
Trigger: ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGA...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTAACTTCCTAATCTCTTaGACATGTCAATCGCACTAC +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLNFLIS*TCQSHY
Trigger: GTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTT...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACAAATGTGTTAGTTTATaGAGCTCTGAACAAGACCAT +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNKCVSL*SSEQDH
Trigger: ATGGTCTTGTTCAGAGCTGCATAAACTAACACATTT...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATAAAATGTGTTAGTTTATaGAGCTCTGAACAAGACCAT +
Preference number: 4 (lower is better)
Translates to: LYTRLLLQEFKTLGVEYIKCVSL*SSEQDH
Trigger: ATGGTCTTGTTCAGAGCTGCATAAACTAACACATTT...TATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535259.6
CDS-3UTR GCA 90 bp ACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCCTATAGAATTAGCTGGTCAATGTaGTTGGTTCTTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: TSNIYPPEHWPLRIFPYRISWSM*LVLPQC
Trigger: GCATTGAGGAAGAACCAAGCACATTGACCAGCTAAT...TCTATAGGGAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp ACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAGAAACTTTTGCCATCTCTTTaGCCCGTTTTCTCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: TCKKIILTKQNAHHEEKKLLPSL*PVFSLG
Trigger: CCCTAGAGAGAAAACGGGGCAAAGAGATGGCAAAAG...TTTCTTCTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TTGCCCACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGTCACATTCTAGGATATaGCTAGAATATCGCCTACAC +
Preference number: 4 (lower is better)
Translates to: LPTCKKIILTKQNAHHEESHSRI*LEYRLH
Trigger: GTGTAGGCGATATTCTAGGCATATCCTAGAATGTGA...CTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGTGGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACATATACATATCAGTTTaGACACGAATTTCAATCCCC +
Preference number: 4 (lower is better)
Translates to: SYISVGAMKWFATNRENNIYISV*TRISIP
Trigger: GGGGATTGAAATTCGTGTGCAAACTGATATGTATAT...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp GGAAGATTTTTAAACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTAACATTGACCATAAATaGGTGCAAGGTGTGCATCGG +
Preference number: 4 (lower is better)
Translates to: GRFLNIRFDTRHFLVHASNIDHK*VQGVHR
Trigger: CCGATGCACACCTTGCACCCATTTATGGTCAATGTT...AGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTTTAAAAATCTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTGGGGTGCTTTCCCTTTaGCTAAGTTTCTGTTGTATC +
Preference number: 4 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVGVLSL*LSFCCI
Trigger: GATACAACAGAAACTTAGCCAAAGGGAAAGCACCCC...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTCCCAAATCGAAAAGGTaGGGAATAGTCATGAGGTCT +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSPKSKR*GIVMRS
Trigger: AGACCTCATGACTATTCCCCACCTTTTCGATTTGGG...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GGTAGAGTACATATTATTCTTATTTGCAGCATAAGGCATAACATGCTCCGAAATCAATTCCATAACCGGTaGTGGCAAAGATGTACCCAC +
Preference number: 4 (lower is better)
Translates to: GRVHIILICSIRHNMLRNQFHNR*WQRCTH
Trigger: GTGGGTACATCTTTGCCACCACCGGTTATGGAATTG...ATTTCGGAGCATGTTATGCCTTATGCTGCAAATAAGAATAATATGTACTCTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATTGAGGAGTTCATGTTaGACATGCTGGAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: FFLHLCWCYEVVCHQQRELRSSC*TCWKCF
Trigger: AAAACATTTCCAGCATGTCCAACATGAACTCCTCAA...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GGTAGAGTACATATTATTCTTATTTGCAGCATAAGGCATAACATGCTCCGAAATAGTCAGCAGCTCTTTTaGGTGAGTCCATTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: GRVHIILICSIRHNMLRNSQQLF*VSPFLR
Trigger: CCTCAAGAATGGACTCACCCAAAAGAGCTGCTGACT...ATTTCGGAGCATGTTATGCCTTATGCTGCAAATAAGAATAATATGTACTCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCATTGGCCACAAATGTTTaGAGTTCGTTCATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSLATNV*SSFMLS
Trigger: AGACAACATGAACGAACTCCAAACATTTGTGGCCAA...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTTATCCTTCTGCCGGTTaGCCACAAATGTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSYPSAG*PQMFGV
Trigger: AACTCCAAACATTTGTGGCCAACCGGCAGAAGGATA...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATATCTGAAATGTCAGAGTaGGCCATCTCTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGISEMSE*AISSGR
Trigger: TCTTCCAGAAGAGATGGCCCACTCTGACATTTCAGA...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTACATTTTCAACAAACTaGGGTGGATCTAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSTFSTN*GGSKWK
Trigger: TTTCCACTTAGATCCACCCCAGTTTGTTGAAAATGT...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp ACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAGAAAATATACACATCATTGTaGCCCCGACTGTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: TCKKIILTKQNAHHEEKKIYTSL*PRLSLE
Trigger: TTCCAGGGACAGTCGGGGCCACAATGATGTGTATAT...TTTCTTCTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAAGAGAAAATTACATGGTaGGCTGACCTTAATGGAATT +
Preference number: 4 (lower is better)
Translates to: FFLHLCWCYEVVCHQQREEKITW*ADLNGI
Trigger: AATTCCATTAAGGTCAGCCCACCATGTAATTTTCTC...TTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTGAGAAAATTACATGGTaGGCTGACCTTAATGGAATT +
Preference number: 4 (lower is better)
Translates to: PNLLHMSIALQCRCILNCEKITW*ADLNGI
Trigger: AATTCCATTAAGGTCAGCCCACCATGTAATTTTCTC...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTCCTTCGGCAGACAGATaGCATTGTACTTCTTACAGA +
Preference number: 4 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVPSADR*HCTSYR
Trigger: TCTGTAAGAAGTACAATGCCATCTGTCTGCCGAAGG...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTAAGGCTACACAGTCATaGAGATTCAGATTTAGGATC +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLKATQS*RFRFRI
Trigger: GATCCTAAATCTGAATCTCCATGACTGTGTAGCCTT...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGACAGAAAGCCTCTTTaGCTTGACGACAAATCACTC +
Preference number: 4 (lower is better)
Translates to: TLLLILPKATFSVSLSRDDRKPL*LDDKSL
Trigger: GAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCTGTC...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCTGGGTCCTTCTCAAGTaGGGAAAACCAATTAGAATT +
Preference number: 4 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFWVLLK*GKPIRI
Trigger: AATTCTAATTGGTTTTCCCCACTTGAGAAGGACCCA...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATATCAAGAGTAATCCGTaGATGCCCAGTCATGGTGCT +
Preference number: 4 (lower is better)
Translates to: FGLTTNHSSVFWEDFLIHIKSNP*MPSHGA
Trigger: AGCACCATGACTGGGCATCCACGGATTACTCTTGAT...ATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAACCTTCTCCTAACTTTTaGTGTGGTTCTACGAACTCT +
Preference number: 4 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAEPSPNF*CGSTNS
Trigger: AGAGTTCGTAGAACCACACCAAAAGTTAGGAGAAGG...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATAACATTAGGCCATTCTaGGTACCTATAAAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: TLLLILPKATFSVSLSRDNIRPF*VPIKPG
Trigger: ACCGGGCTTTATAGGTACCCAGAATGGCCTAATGTT...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CAA 72 bp TGGGATAATGCAGGCGACTCAGAAATGACAAATACTTaGAGGAATTTTTCCTACATCTCTGTTGGTGCTATG +
Preference number: 4 (lower is better)
Translates to: WDNAGDSEMTNT*RNFSYISVGAM
Trigger: CATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTCATTTCTGAGTCGCCTGCATTATCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATAAACAGTAGAGCAAGATaGCAGAAGAGTGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGINSRAR*QKSGSS
Trigger: AGAAGATCCACTCTTCTGTCATCTTGCTCTACTGTT...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGGTATTTGGAGGCCACTaGCCTTTTAAAGTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWVFGGH*PFKVVL
Trigger: AAGGACAACTTTAAAAGGTCAGTGGCCTCCAAATAC...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR TCA 90 bp ACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCCTATAGATTGTTCTTTTGTAATTaGAGGGCATTGTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: TSNIYPPEHWPLRIFPYRLFFCN*RALFCA
Trigger: GGCACAGAACAATGCCCTTCAATTACAAAAGAACAA...TCTATAGGGAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR TCA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACTATTCCATGCATCCTTaGGCTTTAAGGGAATCATCC +
Preference number: 4 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYYSMHP*ALRESS
Trigger: GGATGATTCCCTTAAAGCTCAAGGATGCATGGAATA...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTCAATGCAGAACCCCTTaGAGCATTTCTTCACATTCA +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSQCRTP*SISSHS
Trigger: TGAATGTGAAGAAATGCTGCAAGGGGTTCTGCATTG...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTTTAACTTTCTTGCCATaGTTCCCATTGGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSLTFLP*FPLVTR
Trigger: TCTGGTGACCAATGGGAAGCATGGCAAGAAAGTTAA...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTACCATTGGCATCCAATaGATCATTATTGCCAACATA +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYITIGIQ*IIIANI
Trigger: TATGTTGGCAATAATGATGCATTGGATGCCAATGGT...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACACCATTGGCATCCAATaGATCATTATTGCCAACATA +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYTIGIQ*IIIANI
Trigger: TATGTTGGCAATAATGATGCATTGGATGCCAATGGT...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAACCATTGGCATCCAATaGATCATTATTGCCAACATA +
Preference number: 4 (lower is better)
Translates to: RANNNNNKIPPYIFFLLATIGIQ*IIIANI
Trigger: TATGTTGGCAATAATGATGCATTGGATGCCAATGGT...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCCTAGTCAGCCCCTTCTaGCTTTCAAAAATGAAAGGA +
Preference number: 4 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFLVSPF*LSKMKG
Trigger: TCCTTTCATTTTTGAAAGGCAGAAGGGGCTGACTAG...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCAGTGGCCTAAGAACCTaGAGATGTAAGGATGATGAA +
Preference number: 4 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFSGLRT*RCKDDE
Trigger: TTCATCATCCTTACATCTGCAGGTTCTTAGGCCACT...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTTTGGTTCTTCCTCAATaGATGATACATAGACCTCAA +
Preference number: 4 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLLVLPQ*MIHRPQ
Trigger: TTGAGGTCTATGTATCATGCATTGAGGAAGAACCAA...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGAGAATTTTCCCTCTATaGTTCCCTGATACATTCATA +
Preference number: 4 (lower is better)
Translates to: PPTERITQKGEIACLTKLRIFPL*FPDTFI
Trigger: TATGAATGTATCAGGGAAGCATAGAGGGAAAATTCT...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTGGAGTGCTCCATTTCTaGATAGCTCAACATTCCAAG +
Preference number: 4 (lower is better)
Translates to: GIWNIGNHNITIGIQCIIGVLHF*IAQHSK
Trigger: CTTGGAATGTTGAGCTATGCAGAAATGGAGCACTCC...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATTGTCTTCTTCGTTTCTaGAGACCGCTGACACTTTAT +
Preference number: 4 (lower is better)
Translates to: TLLLILPKATFSVSLSRDCLLRF*RPLTLY
Trigger: ATAAAGTGTCAGCGGTCTGCAGAAACGAAGAAGACA...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp ACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAGAAAACCGGGCACTTCTGTTaGCTCAGGAGTTATATACAT +
Preference number: 4 (lower is better)
Translates to: TCKKIILTKQNAHHEEKKTGHFC*LRSYIH
Trigger: ATGTATATAACTCCTGAGGCAACAGAAGTGCCCGGT...TTTCTTCTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCAAGATGACAGAAGAGTaGATCTTCTTCAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFKMTEE*IFFSWT
Trigger: AGTCCAGCTGAAGAAGATCCACTCTTCTGTCATCTT...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TCTGCATTTTCAGTGCGTATTTCCAACAATGAGTATGTAAGCAAGCAAACAATGAAGATGACAGAAGAGTaGATCTTCTTCAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SAFSVRISNNEYVSKQTMKMTEE*IFFSWT
Trigger: AGTCCAGCTGAAGAAGATCCACTCTTCTGTCATCTT...CATTGTTTGCTTGCTTACATACTCATTGTTGGAAATACGCACTGAAAATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR CCA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTCCCAAATCGAAAAGGTaGGGAATAGTCATGAGGTCT +
Preference number: 4 (lower is better)
Translates to: GIWNIGNHNITIGIQCIIPKSKR*GIVMRS
Trigger: AGACCTCATGACTATTCCCCACCTTTTCGATTTGGG...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp TTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATATTATTCTTATTTGCATTTAACATGTTGCTCTaGGATCCCGTCAGATTGAAG +
Preference number: 4 (lower is better)
Translates to: LLQEFKTLGVEYILFLFAFNMLL*DPVRLK
Trigger: CTTCAATCTGACGGGATCCCAGAGCAACATGTTAAA...TGCAAATAAGAATAATATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp GGAAGATTTTTAAACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTTTTAACATGTTGCTCTaGGATCCCGTCAGATTGAAG +
Preference number: 4 (lower is better)
Translates to: GRFLNIRFDTRHFLVHASFNMLL*DPVRLK
Trigger: CTTCAATCTGACGGGATCCCAGAGCAACATGTTAAA...AGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTTTAAAAATCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTTGAGGAGTTCATGTTaGACATGCTGGAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYILRSSC*TCWKCF
Trigger: AAAACATTTCCAGCATGTCCAACATGAACTCCTCAA...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTATGAGGGAACCTCTTTaGATGAAGTCAGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: GIWNIGNHNITIGIQCIIMREPL*MKSAAL
Trigger: AAGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCAT...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACTACCCTCCAGAACATTaGCCATTACGTATATTTCCC +
Preference number: 4 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYYPPEH*PLRIFP
Trigger: GGGAAATATACGTAATGGCCAATGTTCTGGAGGGTA...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp TTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATTAGCAGGGCACTATTaGACATCCAACATTTACCCT +
Preference number: 4 (lower is better)
Translates to: LLLILPKATFSVSLSRDVLAGHY*TSNIYP
Trigger: AGGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAA...TACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCAAGGCTACACAGTCATaGAGATTCAGATTTAGGATC +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFKATQS*RFRFRI
Trigger: GATCCTAAATCTGAATCTCCATGACTGTGTAGCCTT...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCTGGGTCCTTCTCAAGTaGGGAAAACCAATTAGAATT +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFWVLLK*GKPIRI
Trigger: AATTCTAATTGGTTTTCCCCACTTGAGAAGGACCCA...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAACAAGAATGCACAGAATaGGATAGACAGAGTGACAAA +
Preference number: 4 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAEQECTE*DRQSDK
Trigger: TTTGTCACTCTGTCTATCCCATTCTGTGCATTCTTG...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTAGGTCAAATCGTTCTTTaGAGTGCTCCATTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LLLILPKATFSVSLSRDVGQIVL*SAPFLH
Trigger: ATGCAGAAATGGAGCACTCCAAAGAACGATTTGACC...TACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCAAACAAGATCACCTaGATTTGGCTCAAATTAGAG +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYISNKIT*IWLKLE
Trigger: CTCTAATTTGAGCCAAATCCAGGTGATCTTGTTTGA...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCTTAGAGGATAACTCTTaGTCCTCAAGCTTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFLEDNS*SSSLEA
Trigger: AGCTTCTAAGCTTGAGGACCAAGAGTTATCCTCTAA...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674742.1
3UTR CAA 72 bp GTGTTTAAGGAAATCACACACAAGTCCATATCGGCATaGTCTTCAGAAGCAAATGCGAGCAGAATATATTCT +
Preference number: 4 (lower is better)
Translates to: VFKEITHKSISA*SSEANASRIYS
Trigger: AGAATATATTCTGCTCGCATTTGCTTCTGAAGACAATGCCGATATGGACTTGTGTGTGATTTCCTTAAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CAA 72 bp CACTTCTGTTGCCTCAGGAGTTATATACATATCAGTTaGCACACGAATTTCAATCCCCATTCCTTAAAACAG +
Preference number: 4 (lower is better)
Translates to: HFCCLRSYIHIS*HTNFNPHSLKQ
Trigger: CTGTTTTAAGGAATGGGGATTGAAATTCGTGTGCAAACTGATATGTATATAACTCCTGAGGCAACAGAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CAA 72 bp ATTTACATTTTTACACCATATGACCGGGCACTTCTGTaGCCTCAGGAGTTATATACATATCAGTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: IYIFTPYDRALL*PQELYTYQFAH
Trigger: GTGTGCAAACTGATATGTATATAACTCCTGAGGCAACAGAAGTGCCCGGTCATATGGTGTAAAAATGTAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp AATTTTTCAACCTGCCACTTTATCCCTTTCTTCAAGAATGTAAAGCAGAATGCAAAAGTGGACATTCAGTaGAGTCCTATTAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: NFSTCHFIPFFKNVKQNAKVDIQ*SPISWS
Trigger: TGACCAGCTAATAGGACTTCACTGAATGTCCACTTT...TGCATTCTGCTTTACATTCTTGAAGAAAGGGATAAAGTGGCAGGTTGAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCATAAACTGCTGCAGTTaGTCAGTGAACATTAATTCC +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFINCCS*SVNINS
Trigger: GGAATTAATGTTCACTGATCAACTGCAGCAGTTTAT...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GGTAGAGTACATATTATTCTTATTTGCAGCATAAGGCATAACATGCTCCGAAATCAATGCAGAACCCCTTaGAGCATTTCTTCACATTCA +
Preference number: 4 (lower is better)
Translates to: GRVHIILICSIRHNMLRNQCRTP*SISSHS
Trigger: TGAATGTGAAGAAATGCTGCAAGGGGTTCTGCATTG...ATTTCGGAGCATGTTATGCCTTATGCTGCAAATAAGAATAATATGTACTCTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR GCA 90 bp ACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAGAAATTAACTTTCTTGCCATaGTTCCCATTGGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: TCKKIILTKQNAHHEEKKLTFLP*FPLVTR
Trigger: TCTGGTGACCAATGGGAAGCATGGCAAGAAAGTTAA...TTTCTTCTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTAGTTCATGTTGGACATaGTGGAAATGTTTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSSSCWT*WKCFWL
Trigger: CAGCCAAAAACATTTCCAGCATGTCCAACATGAACT...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTCATGTCCCGGAGACTTaGCCTTATGTAGTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: GIWNIGNHNITIGIQCIIHVPET*PYVVSY
Trigger: ATAACTAACTACATAAGGGCAAGTCTCCGGGACATG...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATAAACTTCCTAATCTCTTaGACATGTCAATCGCACTAC +
Preference number: 4 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGINFLIS*TCQSHY
Trigger: GTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTT...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR GCA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCTCAAGTACAGTTTATaGTCTAGAAGACTCTCTTAC +
Preference number: 4 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFLKYSL*SRRLSY
Trigger: GTAAGAGAGTCTTCTAGAGCATAAACTGTACTTGAG...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp ACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCCTATAGATTGGTTCTTCCTCAATaGATGATACATAGACCTCAA +
Preference number: 4 (lower is better)
Translates to: TSNIYPPEHWPLRIFPYRLVLPQ*MIHRPQ
Trigger: TTGAGGTCTATGTATCATGCATTGAGGAAGAACCAA...TCTATAGGGAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp AATTTTTCAACCTGCCACTTTATCCCTTTCTTCAAGAATGTAAAGCAGAATGCAATTAGCTGGTCAATGTaGTTGGTTCTTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: NFSTCHFIPFFKNVKQNAISWSM*LVLPQC
Trigger: GCATTGAGGAAGAACCAAGCACATTGACCAGCTAAT...TGCATTCTGCTTTACATTCTTGAAGAAAGGGATAAAGTGGCAGGTTGAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTGAAACTCATTCCATCTaGCTGGCAAAGATAACCAAA +
Preference number: 4 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVETHSI*LAKITK
Trigger: TTTGGTTATCTTTGCCAGGCAGATGGAATGAGTTTC...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCGAAACTCATTCCATCTaGCTGGCAAAGATAACCAAA +
Preference number: 4 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFETHSI*LAKITK
Trigger: TTTGGTTATCTTTGCCAGGCAGATGGAATGAGTTTC...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTAACTATGGTGAATTCTaGCAATTAATTCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: ALLDIQHLPSRTLAITYINYGEF*QLIQQV
Trigger: AACCTGCTGAATTAATTGGCAGAATTCACCATAGTT...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp AATTTTTCAACCTGCCACTTTATCCCTTTCTTCAAGAATGTAAAGCAGAATGCAAAGATGACAGAAGAGTaGATCTTCTTCAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: NFSTCHFIPFFKNVKQNAKMTEE*IFFSWT
Trigger: AGTCCAGCTGAAGAAGATCCACTCTTCTGTCATCTT...TGCATTCTGCTTTACATTCTTGAAGAAAGGGATAAAGTGGCAGGTTGAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAGAAATGCTGGAAATGTTTTTaGCTGACCGGAGGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: TCKKIILTKQNAHHEEKKCWKCF*LTGGVL
Trigger: TAAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCA...TTTCTTCTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGTTGGCCACAAATGTTTaGAGTTCGTTCATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWLATNV*SSFMLS
Trigger: AGACAACATGAACGAACTCCAAACATTTGTGGCCAA...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTGATGAGAAAATTACATaGTGGGCTGACCTTAATGGA +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSDEKIT*WADLNG
Trigger: TCCATTAAGGTCAGCCCACCATGTAATTTTCTCATC...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AATTTTTCAACCTGCCACTTTATCCCTTTCTTCAAGAATGTAAAGCAGAATGCAGTACTTTCCCAAAGATaGAGCTATTCCATGCATCCT +
Preference number: 4 (lower is better)
Translates to: NFSTCHFIPFFKNVKQNAVLSQR*SYSMHP
Trigger: AGGATGCATGGAATAGCTCCATCTTTGGGAAAGTAC...TGCATTCTGCTTTACATTCTTGAAGAAAGGGATAAAGTGGCAGGTTGAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTAAGGCTACACAGTCATaGAGATTCAGATTTAGGATC +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSKATQS*RFRFRI
Trigger: GATCCTAAATCTGAATCTCCATGACTGTGTAGCCTT...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCAGAGTATTTTAAATTaGTTGCATGTGCGTGCTATT +
Preference number: 4 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYQSILN*LHVRAI
Trigger: AATAGCACGCACATGCAACCAATTTAAAATACTCTG...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTCAAGAATGCACAGAATaGGATAGACAGAGTGACAAA +
Preference number: 4 (lower is better)
Translates to: MNYNEGSTVITNTLICYSQECTE*DRQSDK
Trigger: TTTGTCACTCTGTCTATCCCATTCTGTGCATTCTTG...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCCAACATTTTAATAGCTaGTCCTCAATCATTCTGACT +
Preference number: 4 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFQHFNS*SSIILT
Trigger: AGTCAGAATGATTGAGGACCAGCTATTAAAATGTTG...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
3UTR CAA 72 bp CACTACAGTGCAGATGCATTCTTAACTGTTTTTATTTaGTCTGTGTCAGGTTTACATGCACACCATATTGCT +
Preference number: 4 (lower is better)
Translates to: HYSADAFLTVFI*SVSGLHAHHIA
Trigger: AGCAATATGGTGTGCATGTAAACCTGACACAGACAAAATAAAAACAGTTAAGAATGCATCTGCACTGTAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
3UTR CAA 72 bp ACTCATGTTTGCTGGAGAACAATTAACCTCATTAATTaGAAAGGCAGCTGTGGTATTGGCTATGAGTTATGT +
Preference number: 4 (lower is better)
Translates to: THVCWRTINLIN*KGSCGIGYELC
Trigger: ACATAACTCATAGCCAATACCACAGCTGCCTTTCAAATTAATGAGGTTAATTGTTCTCCAGCAAACATGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATAATAAACTGCTGCAGTTaGTCAGTGAACATTAATTCC +
Preference number: 4 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGIINCCS*SVNINS
Trigger: GGAATTAATGTTCACTGATCAACTGCAGCAGTTTAT...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GGTAGAGTACATATTATTCTTATTTGCAGCATAAGGCATAACATGCTCCGAAATAGTTCATGTTGGACATaGTGGAAATGTTTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GRVHIILICSIRHNMLRNSSCWT*WKCFWL
Trigger: CAGCCAAAAACATTTCCAGCATGTCCAACATGAACT...ATTTCGGAGCATGTTATGCCTTATGCTGCAAATAAGAATAATATGTACTCTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CCA 90 bp TTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATGATGAGAAAATTACATaGTGGGCTGACCTTAATGGA +
Preference number: 4 (lower is better)
Translates to: FGLTTNHSSVFWEDFLIHDEKIT*WADLNG
Trigger: TCCATTAAGGTCAGCCCACCATGTAATTTTCTCATC...ATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CCA 90 bp ACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAGAAACATTGCATGGGTCCTTaGTTATCCTTTGTATTAGAG +
Preference number: 4 (lower is better)
Translates to: TCKKIILTKQNAHHEEKKHCMGP*LSFVLE
Trigger: CTCTAATACAAAGGATAACCAAGGACCCATGCAATG...TTTCTTCTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTAATGTTTTCGTATTTCTaGATCTTCGCTCTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LLLILPKATFSVSLSRDVMFSYF*IFALCS
Trigger: TGAGCAAAGAGCGAAGATCCAGAAATACGAAAACAT...TACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATATCAAACAAGATCACCTaGATTTGGCTCAAATTAGAG +
Preference number: 4 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGISNKIT*IWLKLE
Trigger: CTCTAATTTGAGCCAAATCCAGGTGATCTTGTTTGA...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR TCA 90 bp AATGACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGAAGCGTGAAATGATTTaGCAGATTTTGCTGCAATGT +
Preference number: 4 (lower is better)
Translates to: NDKYFEEFFLHLCWCYEVKREMI*QILLQC
Trigger: ACATTGCAGCAAAATCTGTCAAATCATTTCACGCTT...CACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACGCACTACAGTGCAGATaGATTCTTAACTGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYALQCR*ILNCFY
Trigger: ATAAAAACAGTTAAGAATGCATCTGCACTGTAGTGC...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp AATTTTTCAACCTGCCACTTTATCCCTTTCTTCAAGAATGTAAAGCAGAATGCACTCAAGTACAGTTTATaGTCTAGAAGACTCTCTTAC +
Preference number: 4 (lower is better)
Translates to: NFSTCHFIPFFKNVKQNALKYSL*SRRLSY
Trigger: GTAAGAGAGTCTTCTAGAGCATAAACTGTACTTGAG...TGCATTCTGCTTTACATTCTTGAAGAAAGGGATAAAGTGGCAGGTTGAAAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR GCA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTGCTCTCCATCATTCATaGAGAAACTCTATTTCCTAT +
Preference number: 4 (lower is better)
Translates to: GIWNIGNHNITIGIQCIIALHHS*RNSISY
Trigger: ATAGGAAATAGAGTTTCTGCATGAATGATGGAGAGC...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CCA 90 bp TTTCACAACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCACATTTTCAACAAACTaGGGTGGATCTAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: FHNITVDSSKGHVFSFFITFSTN*GGSKWK
Trigger: TTTCCACTTAGATCCACCCCAGTTTGTTGAAAATGT...GATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR GCA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTGCACTACAGTGCAGATaGATTCTTAACTGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: GIWNIGNHNITIGIQCIIALQCR*ILNCFY
Trigger: ATAAAAACAGTTAAGAATGCATCTGCACTGTAGTGC...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CCA 90 bp AATTTTTCAACCTGCCACTTTATCCCTTTCTTCAAGAATGTAAAGCAGAATGCACAGAGTATTTTAAATTaGTTGCATGTGCGTGCTATT +
Preference number: 4 (lower is better)
Translates to: NFSTCHFIPFFKNVKQNAQSILN*LHVRAI
Trigger: AATAGCACGCACATGCAACCAATTTAAAATACTCTG...TGCATTCTGCTTTACATTCTTGAAGAAAGGGATAAAGTGGCAGGTTGAAAAATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS TCA 90 bp AGCTCCGCTTCCTGCCCCACTCCGGACGGCAACTGCCCGGTCCTCTaGGCGCGCCGGAGCACCCTCTCCGCAACCCAGCTCCGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: SSASCPTPDGNCPVL*ARRSTLSATQLRAG
Trigger: ACCAGCCCGGAGCTGGGTTGCGGAGAGGGTGCTCCGGCGCGCTCAGAGGACCGGGCAGTTGCCGTCCGGAGTGGGGCAGGAAGCGGAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675189.1
ENST00000675398.1
CDS CCA 90 bp GTCGCCACTGACGGTCCCTGTAGCCCGAGAAGGTCGAGGATGCAGTaGGGCGCGCTGCGCGCACGAGCATCTCGGCCGCCTCAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: VATDGPCSPRRSRMQ*GALRARASRPPQQP
Trigger: TGGCTGCTGAGGCGGCCGAGATGCTCGTGCGCGCAGCGCGCCCCACTGCATCCTCGACCTTCTCGGGCTACAGGGACCGTCAGTGGCGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000566665.1
ENST00000675189.1
ENST00000675398.1
ENST00000676032.1
CDS GCA 90 bp AGTTCTCAGCAGTGGCCGCTCCTGGTCATCTCCAGGGCTGATGGCTaGGGCCGCGATTCTCAGCGCTCACCCGGTCCCATGATCCGGCCA +
Preference number: 5 (lower is better)
Translates to: SSQQWPLLVISRADG*GRDSQRSPGPMIRP
Trigger: TGGCCGGATCATGGGACCGGGTGAGCGCTGAGAATCGCGGCCGCAGCCATCAGCCCTGGAGATGACCAGGAGCGGCCACTGCTGAGAACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675189.1
ENST00000675398.1
ENST00000676032.1
CDS GCA 90 bp GGATCCTCAGCCCCTGTGGCTGATAGCGGGAGCTCCACTCCAGGGTaGACAGGAGAATGGGAGCCCCAGGTTGGCCACCCACGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: GSSAPVADSGSSTPG*TGEWEPQVGHPREA
Trigger: AGCTTCTCGTGGGTGGCCAACCTGGGGCTCCCATTCTCCTGTGCACCCTGGAGTGGAGCTCCCGCTATCAGCCACAGGGGCTGAGGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS GCA 90 bp AACACGAGGCCGTGGATGCGTGCCCCGGACATGAGGTCGCACACGTaGGTGATGAGGCTCTTGGGGTCGGTGCGGTTCATCAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: NTRPWMRAPDMRSHT*VMRLLGSVRFISRA
Trigger: AGCTCTGCTGATGAACCGCACCGACCCCAAGAGCCTCATCACGCACGTGTGCGACCTCATGTCCGGGGCACGCATCCACGGCCTCGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000566665.1
ENST00000675189.1
ENST00000675398.1
ENST00000676032.1
CDS CCA 90 bp CCTGTGGCTGATAGCGGGAGCTCCACTCCAGGGTGCACAGGAGAATaGGAGCCCCAGGTTGGCCACCCACGAGAAGCTAACTGGGCACCT +
Preference number: 5 (lower is better)
Translates to: PVADSGSSTPGCTGE*EPQVGHPREANWAP
Trigger: AGGTGCCCAGTTAGCTTCTCGTGGGTGGCCAACCTGGGGCTCCCATTCTCCTGTGCACCCTGGAGTGGAGCTCCCGCTATCAGCCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS-3UTR CAA 90 bp CCCAGTCCTGCTGGTAGACCTGCTCCCCGGTGGCTGGGTTACCTGTCTCCTGAAGGGTCCCTCGGGCCTTaGGCTCCAGATGTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: PSPAGRPAPRWLGYLSPEGSLGP*APDVSW
Trigger: CCAAGACACATCTGGAGCCAAAGGCCCGAGGGACCC...TTCAGGAGACAGGTAACCCAGCCACCGGGGAGCAGGTCTACCAGCAGGACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS CCA 90 bp CAGATTCTAGGGGCGTCCGAAGACCTGCAGCAGCTGCCATGCAGCTaGTGGCTTCCCAGGTCCTGGCAGGGCATCAGTTTCCGGCCTTAC +
Preference number: 5 (lower is better)
Translates to: QILGASEDLQQLPCS*WLPRSWQGISFRPY
Trigger: GTAAGGCCGGAAACTGATGCCCTGCCAGGACCTGGGAAGCCACCAGCTGCATGGCAGCTGCTGCAGGTCTTCGGACGCCCCTAGAATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566665.1
ENST00000676032.1
CDS GCA 90 bp TCCGGCTCACAGTCGGAGAAGGACTTGTACCTGGGCCACACGGCGTaGCTCAGGCTCAGCGTATGGTTCTCCCACTTGCCCACCTTTTCC +
Preference number: 5 (lower is better)
Translates to: SGSQSEKDLYLGHTA*LRLSVWFSHLPTFS
Trigger: GGAAAAGGTGGGCAAGTGGGAGAACCATACGCTGAGCCTGAGGCACGCCGTGTGGCCCAGGTACAAGTCCTTCTCCGACTGTGAGCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000535259.6
ENST00000562109.5
ENST00000636273.2
ENST00000674742.1
ENST00000675189.1
ENST00000675398.1
CDS CCA 90 bp ACAACAAGCCCTTTCTTACGGGTGCAAGGTGTGCATCGGGACCTCTaGCCTCTCCATCTGCCCGTAGCAGCTGGCCTTGGCCTCGGGGAT +
Preference number: 5 (lower is better)
Translates to: TTSPFLRVQGVHRDL*PLHLPVAAGLGLGD
Trigger: ATCCCCGAGGCCAAGGCCAGCTGCTACGGGCAGATGGAGAGGCCAGAGGTCCCGATGCACACCTTGCACCCGTAAGAAAGGGCTTGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568247.3
ENST00000637393.1
CDS-3UTR CAA 90 bp CATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGCAGTCGGAGAAGGACTaGTACCTGGGCCACACGGCG +
Preference number: 5 (lower is better)
Translates to: HHCGPDCPWNSTMPLTSRQSEKD*YLGHTA
Trigger: CGCCGTGTGGCCCAGGTACAAGTCCTTCTCCGACTG...CCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS GCA 90 bp CTGGGCCCACCTCTGTGCCCCATGGTACTCGTAAATCTCCAAACATaGCACCACCGCCACCACCACCACCCCACAGCCTACTTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: LGPPLCPMVLVNLQT*HHRHHHHPTAYFSV
Trigger: AACTGAGAAGTAGGCTGTGGGGTGGTGGTGGTGGCGGTGGTGGCATGTTTGGAGATTTACGAGTACCATGGGGCACAGAGGTGGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566665.1
CDS-3UTR CAA 90 bp GGCATTTGGCAGCCCCCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCAGCCGTTCCCTGTCCTaGAGGCTTATGCTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: GIWQPPGFRGHQRKTESLSRSLS*RLMLRE
Trigger: CTCCCGGAGCATAAGCCTCAAGGACAGGGAACGGCT...GAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGGGGGCTGCCAAATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GCATCTGGTCTTCATCGATGTCATAGAGGTTCCCCATCCGCAGGCAGGCATCGCAGCCGTTCCCTGTCCTaGAGGCTTATGCTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: ASGLHRCHRGSPSAGRHRSRSLS*RLMLRE
Trigger: CTCCCGGAGCATAAGCCTCAAGGACAGGGAACGGCT...GCGATGCCTGCCTGCGGATGGGGAACCTCTATGACATCGATGAAGACCAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS CCA 90 bp TGTAACATTGACCATAAATGGGTGCAAGGTGTGCATCGGGACCTCTaGCCTCTCCATCTGCCCGTAGCAGCTGGCCTTGGCCTCGGGGAT +
Preference number: 5 (lower is better)
Translates to: CNIDHKWVQGVHRDL*PLHLPVAAGLGLGD
Trigger: ATCCCCGAGGCCAAGGCCAGCTGCTACGGGCAGATGGAGAGGCCAGAGGTCCCGATGCACACCTTGCACCCATTTATGGTCAATGTTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000535259.6
ENST00000562109.5
ENST00000636273.2
ENST00000674742.1
ENST00000675189.1
ENST00000675398.1
CDS CCA 90 bp ATCTTCAGCATGACCGTGGCTTGCTGCTGGATGGACGCTCCAAACTaGAAGAAGGTAGACGTCGGATCCTCCTCCTGCCATGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: IFSMTVACCWMDAPN*KKVDVGSSSCHGSA
Trigger: GGCTGAGCCATGGCAGGAGGAGGATCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCTGAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535259.6
ENST00000568247.3
CDS-3UTR CAA 90 bp GGACGACCGAAGATAGCTGTCATTCACCGCCTGGGATGGCAACGAGTGTTTGTAAGGGGTTCCGGTTCATaGGCAGCGTGGAGTCCCCCT +
Preference number: 5 (lower is better)
Translates to: GRPKIAVIHRLGWQRVFVRGSGS*AAWSPP
Trigger: AGGGGGACTCCACGCTGCCAATGAACCGGAACCCCT...TACAAACACTCGTTGCCATCCCAGGCGGTGAATGACAGCTATCTTCGGTCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS GCA 90 bp CAGGGCATCAGTTTCCGGCCTTACCTTGTCAGCCATGATCATAGATaGGCCCCCATGAATGCCCAAGATGGGGACGAAGGTGTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: QGISFRPYLVSHDHR*APMNAQDGDEGVGG
Trigger: TCCTCCCACACCTTCGTCCCCATCTTGGGCATTCATGGGGGCGCATCTATGATCATGGCTGACAAGGTAAGGCCGGAAACTGATGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566665.1
ENST00000676032.1
CDS-3UTR CAA 90 bp CCCTTCTGCCTTTCAAAAATGAAAGGAAGCTCCTCTCACCCACTGCCTCCCTCTCAGCATGACCGTGGCTaGCTGCTGGATGGACGCTCC +
Preference number: 5 (lower is better)
Translates to: PFCLSKMKGSSSHPLPPSQHDRG*LLDGRS
Trigger: GGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCTG...AGAGGGAGGCAGTGGGTGAGAGGAGCTTCCTTTCATTTTTGAAAGGCAGAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTGACGACACAGTCGGAGAAGGACTaGTACCTGGGCCACACGGCG +
Preference number: 5 (lower is better)
Translates to: PGFRGHQRKTESLFGLTTQSEKD*YLGHTA
Trigger: CGCCGTGTGGCCCAGGTACAAGTCCTTCTCCGACTG...TGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGTCTGGCAAGAGAGACTaGCTCCTCTTGCTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: HHCGPDCPWNSTMPLTSRSGKRD*LLLLSS
Trigger: GGAGGACAGCAAGAGGAGCAAGTCTCTCTTGCCAGA...CCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp TGTACCTATCTGAGGACTAGTTGGGTCCTTCTCAAGTGGGGAAAACCAATTAGAGCCGGCTGCTGGGAGTaGTGCGACCGGGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CTYLRTSWVLLKWGKPIRAGCWE*CDRELL
Trigger: CAGCAGCTCCCGGTCGCACAACTCCCAGCAGCCGGC...TCTAATTGGTTTTCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATAGGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS-3UTR CAA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAACAGCATGACCGTGGCTaGCTGCTGGATGGACGCTCC +
Preference number: 5 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQQHDRG*LLDGRS
Trigger: GGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCTG...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GTTCGCTTTGGATTCTGTGCTCACGGCCACCTCCACCGTGTTAGGGTTGGACTCGTATGGTTCTCCCACTaGCCCACCTTTTCCCATTCC +
Preference number: 5 (lower is better)
Translates to: VRFGFCAHGHLHRVRVGLVWFSH*PTFSHS
Trigger: GGAATGGGAAAAGGTGGGCAAGTGGGAGAACCATAC...GAGTCCAACCCTAACACGGTGGAGGTGGCCGTGAGCACAGAATCCAAAGCGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAAGGGGTTCCGGTTCATaGGCAGCGTGGAGTCCCCCT +
Preference number: 5 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQRGSGS*AAWSPP
Trigger: AGGGGGACTCCACGCTGCCAATGAACCGGAACCCCT...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS TCA 90 bp CAGCTCCTCCATCTCACCTGGACAGATCACAACATTCACAGGCAGTaGGGACCAGAACATGCACTTTGGGGCAGACGCTTCTGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: QLLHLTWTDHNIHRQ*GPEHALWGRRFWVW
Trigger: CCAAACCCAGAAGCGTCTGCCCCAAAGTGCATGTTCTGGTCCTCACTGCCTGTGAATGTTGTGATCTGTCCAGGTGAGATGGAGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463531.1
CDS-3UTR CAA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGCAGCATGACCGTGGCTaGCTGCTGGATGGACGCTCC +
Preference number: 5 (lower is better)
Translates to: SRALLDIQHLPSRTLAITQHDRG*LLDGRS
Trigger: GGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCTG...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGCAGTCGGAGAAGGACTaGTACCTGGGCCACACGGCG +
Preference number: 5 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVQSEKD*YLGHTA
Trigger: CGCCGTGTGGCCCAGGTACAAGTCCTTCTCCGACTG...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CCGAAGATAGCTGTCATTCACCGCCTGGGATGGCAACGAGTGTTTGTAAGGGTCACGATGCTGAGATGGTaGTCATCCGGCTCACAGTCG +
Preference number: 5 (lower is better)
Translates to: PKIAVIHRLGWQRVFVRVTMLRW*SSGSQS
Trigger: CGACTGTGAGCCGGATGACAACCATCTCAGCATCGT...GACCCTTACAAACACTCGTTGCCATCCCAGGCGGTGAATGACAGCTATCTTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp GGCATTTGGCAGCCCCCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTCAGAACGTTCCTCATaGATGGTGAGCGAGCCAACT +
Preference number: 5 (lower is better)
Translates to: GIWQPPGFRGHQRKTESLSERSS*MVSEPT
Trigger: AGTTGGCTCGCTCACCATCAATGAGGAACGTTCTGA...GAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGGGGGCTGCCAAATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGACGACCGAGTTGGCCACAAATGTTaGGAGTTCGTTCATGTTGTC +
Preference number: 5 (lower is better)
Translates to: WPRLSLEQYDAVDLKDDRVGHKC*EFVHVV
Trigger: GACAACATGAACGAACTCCAAACATTTGTGGCCAAC...TCGGTCGTCCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCAAGCCGTTCCCTGTCCTaGAGGCTTATGCTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLASRSLS*RLMLRE
Trigger: CTCCCGGAGCATAAGCCTCAAGGACAGGGAACGGCT...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGCATTTGGCAGCCCCCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCCACCACCATGGCTGTTaGGAAACGGAACGAGTTATG +
Preference number: 5 (lower is better)
Translates to: GIWQPPGFRGHQRKTESLHHHGC*ETERVM
Trigger: CATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTG...GAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGGGGGCTGCCAAATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGCACCACCATGGCTGTTaGGAAACGGAACGAGTTATG +
Preference number: 5 (lower is better)
Translates to: HHCGPDCPWNSTMPLTSRHHHGC*ETERVM
Trigger: CATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTG...CCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535259.6
CDS TCA 90 bp TGCCATGGCTCAGCCTGTATTTTTCGGATTCTACATATCAGCCTCTaGCCACCTCTGGCACTCGGCTTCCTTAGAATGTGCAGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: CHGSACIFRILHISL*PPLALGFLRMCSWG
Trigger: CCCCCAGCTGCACATTCTAAGGAAGCCGAGTGCCAGAGGTGGTCAGAGGCTGATATGTAGAATCCGAAAAATACAGGCTGAGCCATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568247.3
CDS GCA 90 bp CACCTGGACAGATCACAACATTCACAGGCAGTGAGGACCAGAACATaGACTTTGGGGCAGACGCTTCTGGGTTTGGAACAGACGATGTGC +
Preference number: 5 (lower is better)
Translates to: HLDRSQHSQAVRTRT*TLGQTLLGLEQTMC
Trigger: GCACATCGTCTGTTCCAAACCCAGAAGCGTCTGCCCCAAAGTGCATGTTCTGGTCCTCACTGCCTGTGAATGTTGTGATCTGTCCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463531.1
CDS-3UTR CAA 90 bp ATACGGCTGTTGGTGCATGTCACCACATTAACAACTCTGGGAAGAGCGATACACTGCGTGATGAGGCTCTaGGGGTCGGTGCGGTTCATC +
Preference number: 5 (lower is better)
Translates to: IRLLVHVTTLTTLGRAIHCVMRL*GSVRFI
Trigger: GATGAACCGCACCGACCCCAAGAGCCTCATCACGCA...GTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACATGCACCAACAGCCGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCCAGCATGACCGTGGCTaGCTGCTGGATGGACGCTCC +
Preference number: 5 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTQHDRG*LLDGRS
Trigger: GGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCTG...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CCGAAGATAGCTGTCATTCACCGCCTGGGATGGCAACGAGTGTTTGTAAGGGTCTGCCATGACTGCCCGTaGATAGACCACTTCACCGAT +
Preference number: 5 (lower is better)
Translates to: PKIAVIHRLGWQRVFVRVCHDCP*IDHFTD
Trigger: ATCGGTGAAGTGGTCTATCAACGGGCAGTCATGGCA...GACCCTTACAAACACTCGTTGCCATCCCAGGCGGTGAATGACAGCTATCTTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp AGAAGCCGTTCCCTGTCCTTGAGGCTTATGCTCCGGGAGGGCCTGCTAAGGTCTTTGGCTAAGTTTCTGTaGTATCCAACAGGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: RSRSLSLRLMLREGLLRSLAKFL*YPTGLK
Trigger: CTTCAGCCCTGTTGGATACAACAGAAACTTAGCCAA...AGACCTTAGCAGGCCCTCCCGGAGCATAAGCCTCAAGGACAGGGAACGGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp GGCATTTGGCAGCCCCCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTGGGTGAGTCCATTCTaGAGGAGTTCATGTTGGACA +
Preference number: 5 (lower is better)
Translates to: GIWQPPGFRGHQRKTESLWVSPF*RSSCWT
Trigger: TGTCCAACATGAACTCCTCAAGAATGGACTCACCCA...GAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGGGGGCTGCCAAATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GCCGTAAAAATTTCCCTCCAGAAGCCGTTCCCTGTCCTTGAGGCTTATGCTCCGTCCTATTCTCTGCTGTaGCCTCATCCCTCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: AVKISLQKPFPVLEAYAPSYSLL*PHPSGR
Trigger: TCTCCCAGAGGGATGAGGCAACAGCAGAGAATAGGA...CGGAGCATAAGCCTCAAGGACAGGGAACGGCTTCTGGAGGGAAATTTTTACGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCAGGGGTTCCGGTTCATaGGCAGCGTGGAGTCCCCCT +
Preference number: 5 (lower is better)
Translates to: SPLASNASLLPTYPVGMSRGSGS*AAWSPP
Trigger: AGGGGGACTCCACGCTGCCAATGAACCGGAACCCCT...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTGGGTCCCTCGGGCCTTaGGCTCCAGATGTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPGSLGP*APDVSW
Trigger: CCAAGACACATCTGGAGCCAAAGGCCCGAGGGACCC...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGCATTTGGCAGCCCCCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCCTGGTAAAGAAATCTTaGGGGACCCTCAGGTTTGGA +
Preference number: 5 (lower is better)
Translates to: GIWQPPGFRGHQRKTESLLVKKS*GTLRFG
Trigger: TCCAAACCTGAGGGTCCCCAAAGATTTCTTTACCAG...GAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGGGGGCTGCCAAATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS CCA 90 bp CAGCCTGTATTTTTCGGATTCTACATATCAGCCTCTGACCACCTCTaGCACTCGGCTTCCTTAGAATGTGCAGCTGGGGGAGAGGAACAG +
Preference number: 5 (lower is better)
Translates to: QPVFFGFYISASDHL*HSASLECAAGGEEQ
Trigger: CTGTTCCTCTCCCCCAGCTGCACATTCTAAGGAAGCCGAGTGCCAGAGGTGGTCAGAGGCTGATATGTAGAATCCGAAAAATACAGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568247.3
CDS CCA 90 bp ATCTTCAGCATGACCGTGGCTTGCTGCTGGATGGACGCTCCAAACTaGAAGAAGGTAGACGTCGGATCATGGGTGTCCCTTCACTTCAAA +
Preference number: 5 (lower is better)
Translates to: IFSMTVACCWMDAPN*KKVDVGSWVSLHFK
Trigger: TTTGAAGTGAAGGGACACCCATGATCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCTGAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566670.2
CDS CCA 90 bp TTTCAGAATAACATCCGAAGATTACCCCACAGATACCTTCTCCTCTaGAATCGCTCTCAACAGTGTCAGGCAGAGCCCCGGGAGCCCACA +
Preference number: 5 (lower is better)
Translates to: FQNNIRRLPHRYLLL*NRSQQCQAEPREPT
Trigger: TGTGGGCTCCCGGGGCTCTGCCTGACACTGTTGAGAGCGATTCCAGAGGAGAAGGTATCTGTGGGGTAATCTTCGGATGTTATTCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674742.1
CDS-3UTR CAA 90 bp ATCCTGGTAGGGGTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTCAACCTTCTTCAGCTGGACTaGTGTCTTTGCATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: ILVGVREVHVLGQGHIFNLLQLD*CLCILK
Trigger: TTTGAGGATGCAAAGACACAAGTCCAGCTGAAGAAG...GTTGAAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGACCCCTACCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp TTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATACAGTCGGAGAAGGACTaGTACCTGGGCCACACGGCG +
Preference number: 5 (lower is better)
Translates to: LYTRLLLQEFKTLGVEYIQSEKD*YLGHTA
Trigger: CGCCGTGTGGCCCAGGTACAAGTCCTTCTCCGACTG...TATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp CGTTGTTGGAAAGCCCCTCTTCATTATGCAAGGGGTTCCGGTTCATTGGCAGCGTGGGATCCCGTCAGATaGAAGTCTGGAGACTTCTTC +
Preference number: 5 (lower is better)
Translates to: RCWKAPLHYARGSGSLAAWDPVR*KSGDFF
Trigger: GAAGAAGTCTCCAGACTTCAATCTGACGGGATCCCA...CGCTGCCAATGAACCGGAACCCCTTGCATAATGAAGAGGGGCTTTCCAACAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp AGAAGCCGTTCCCTGTCCTTGAGGCTTATGCTCCGGGAGGGCCTGCTAAGGTCTGAGAGTAAGAGGATGTaGTCCCTGGAATACATAGTT +
Preference number: 5 (lower is better)
Translates to: RSRSLSLRLMLREGLLRSESKRM*SLEYIV
Trigger: AACTATGTATTCCAGGGACAACATCCTCTTACTCTC...AGACCTTAGCAGGCCCTCCCGGAGCATAAGCCTCAAGGACAGGGAACGGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp TATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGGGTCTAGAGTTCGCTTaGGATTCTGTGCTCACGGCC +
Preference number: 5 (lower is better)
Translates to: YLVSAMLSTHLTRFLEWKGLEFA*DSVLTA
Trigger: GGCCGTGAGCACAGAATCCAAAGCGAACTCTAGACC...CTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CCCTTCTGCCTTTCAAAAATGAAAGGAAGCTCCTCTCACCCACTGCCTCCCTCTACCTCACTACAGTCCTaGGGGTATTTGGAGGCCACT +
Preference number: 5 (lower is better)
Translates to: PFCLSKMKGSSSHPLPPSTSLQS*GYLEAT
Trigger: AGTGGCCTCCAAATACCCCAAGGACTGTAGTGAGGT...AGAGGGAGGCAGTGGGTGAGAGGAGCTTCCTTTCATTTTTGAAAGGCAGAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CATAACATAGCAACTATCTTGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTGAGCGTGGAGTCCCCCTaGCGGAAGTTTTCACTGGGA +
Preference number: 5 (lower is better)
Translates to: HNIATILSGALVFVAGTVSVESP*RKFSLG
Trigger: TCCCAGTGAAAACTTCCGCAAGGGGGACTCCACGCT...CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCAGGGGTTCCGGTTCATaGGCAGCGTGGAGTCCCCCT +
Preference number: 5 (lower is better)
Translates to: LGDINVLVYAALNKTIEARGSGS*AAWSPP
Trigger: AGGGGGACTCCACGCTGCCAATGAACCGGAACCCCT...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTAGAGACTTGCTCCTCTaGCTGTCCTCCAGACCTTGG +
Preference number: 5 (lower is better)
Translates to: GIQCIIIANIPSRHVPETRDLLL*LSSRPW
Trigger: CCAAGGTCTGGAGGACAGCAAGAGGAGCAAGTCTCT...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TATGGAATCCACGGATTTCTTCCACAGCTGCCGGGGTCTAGAGTTCGCTTTGGAAACAGTACGATGCCGTaGACCTCAAGGACGACCGAA +
Preference number: 5 (lower is better)
Translates to: YGIHGFLPQLPGSRVRFGNSTMP*TSRTTE
Trigger: TTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGTT...TCCAAAGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATCCGTGGATTCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp GGAAGTTTTCACTGGGATCCTGGTAGGGGTCCGGGAAGTCCACGTTCTCGGGCATTGTACACGCGTCTATaGCTGCAGGAATTTAAAACC +
Preference number: 5 (lower is better)
Translates to: GSFHWDPGRGPGSPRSRALYTRL*LQEFKT
Trigger: GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA...TGCCCGAGAACGTGGACTTCCCGGACCCCTACCAGGATCCCAGTGAAAACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp CGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGAGGGTCCCTCGGGCCTTaGGCTCCAGATGTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: RRHKCVSLCSSEQDHRSRGSLGP*APDVSW
Trigger: CCAAGACACATCTGGAGCCAAAGGCCCGAGGGACCC...TCGGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS TCA 90 bp TCAGGCAGAGCCCCGGGAGCCCACACATCTTTCTCTGTGTTCTTGTaGCCATGGAAATCAGGCAGGTCTCAAGAAACAAAGTCACAAAGG +
Preference number: 5 (lower is better)
Translates to: SGRAPGAHTSFSVFL*PWKSGRSQETKSQR
Trigger: CCTTTGTGACTTTGTTTCTTGAGACCTGCCTGATTTCCATGGTCACAAGAACACAGAGAAAGATGTGTGGGCTCCCGGGGCTCTGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674742.1
CDS CCA 90 bp ATCTTCAGCATGACCGTGGCTTGCTGCTGGATGGACGCTCCAAACTaGAAGAAGGTAGACGTCGGATCCTTGTCAGCCATGATCATAGAT +
Preference number: 5 (lower is better)
Translates to: IFSMTVACCWMDAPN*KKVDVGSLSAMIID
Trigger: ATCTATGATCATGGCTGACAAGGATCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCTGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675189.1
ENST00000675398.1
CDS CCA 90 bp CATTTTCAGAAACAAGGCAAAAGGCATTTCCATTCATTTCTGGGTTaGAGAGGCAAGACCTGGTTCTCACCAGGGCCAGTGGCCACGACC +
Preference number: 5 (lower is better)
Translates to: HFQKQGKRHFHSFLG*RGKTWFSPGPVATT
Trigger: GGTCGTGGCCACTGGCCCTGGTGAGAACCAGGTCTTGCCTCTCCAACCCAGAAATGAATGGAAATGCCTTTTGCCTTGTTTCTGAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566665.1
CDS CCA 90 bp ATCTTCAGCATGACCGTGGCTTGCTGCTGGATGGACGCTCCAAACTaGAAGAAGGTAGACGTCGGATCCTTGTTTGGGGACACCTTTTTA +
Preference number: 5 (lower is better)
Translates to: IFSMTVACCWMDAPN*KKVDVGSLFGDTFL
Trigger: TAAAAAGGTGTCCCCAAACAAGGATCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCTGAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674742.1
CDS-3UTR CAA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCAATGGGAGCCCCAGGTaGGCCACCCACGAGAAGCTA +
Preference number: 5 (lower is better)
Translates to: LGDINVLVYAALNKTIEANGSPR*ATHEKL
Trigger: TAGCTTCTCGTGGGTGGCCAACCTGGGGCTCCCATT...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS-3UTR CAA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCGTGATGAGGCTCTaGGGGTCGGTGCGGTTCATC +
Preference number: 5 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRCVMRL*GSVRFI
Trigger: GATGAACCGCACCGACCCCAAGAGCCTCATCACGCA...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000675398.1
CDS-3UTR CAA 90 bp AACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGACAGCATGACCGTGGCTaGCTGCTGGATGGACGCTCC +
Preference number: 5 (lower is better)
Translates to: NIRFDTRHFLVHASIAAGQHDRG*LLDGRS
Trigger: GGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCTG...TCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp CTCTTTAGGGAGTGGGTCCTATTCTCTGCTGTTGCCTCATCCCTCTGGGAGACTGCTGGACTTGTGTCTTaGCATCCTCAAAGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: LFREWVLFSAVASSLWETAGLVS*HPQRKC
Trigger: ACACTTCCTTTGAGGATGCAAAGACACAAGTCCAGC...AGTCTCCCAGAGGGATGAGGCAACAGCAGAGAATAGGACCCACTCCCTAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGACGATGCTGAGATGGTaGTCATCCGGCTCACAGTCG +
Preference number: 5 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVTMLRW*SSGSQS
Trigger: CGACTGTGAGCCGGATGACAACCATCTCAGCATCGT...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GTTCGCTTTGGATTCTGTGCTCACGGCCACCTCCACCGTGTTAGGGTTGGACTCGTTGAATTGTTGATTTaGACGAACTTCCGACATGGC +
Preference number: 5 (lower is better)
Translates to: VRFGFCAHGHLHRVRVGLVELLI*TNFRHG
Trigger: GCCATGTCGGAAGTTCGTCAAAATCAACAATTCAAC...GAGTCCAACCCTAACACGGTGGAGGTGGCCGTGAGCACAGAATCCAAAGCGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCATGCCATGACTGCCCGTaGATAGACCACTTCACCGAT +
Preference number: 5 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLACHDCP*IDHFTD
Trigger: ATCGGTGAAGTGGTCTATCAACGGGCAGTCATGGCA...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTACAGGCACGGAGTTATaGAACACCAGGCCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: GIQCIIIANIPSRHVPETTGTEL*NTRPQR
Trigger: TCTTTGGGGCCTGGTGTTCAATAACTCCGTGCCTGT...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GTCCGGGAAGTCCACGTTCTCGGGCAGGGTCACATTTTCAACAAACTGGGGTGGTGGAGTTCGTTCATGTaGTCTCCAAAAATGCTCTCT +
Preference number: 5 (lower is better)
Translates to: VREVHVLGQGHIFNKLGWWSSFM*SPKMLS
Trigger: AGAGAGCATTTTTGGAGACAACATGAACGAACTCCA...CCACCCCAGTTTGTTGAAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTGGTCTAGAGTTCGCTTaGGATTCTGTGCTCACGGCC +
Preference number: 5 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIGLEFA*DSVLTA
Trigger: GGCCGTGAGCACAGAATCCAAAGCGAACTCTAGACC...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCATCCTATTCTCTGCTGTaGCCTCATCCCTCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLASYSLL*PHPSGR
Trigger: TCTCCCAGAGGGATGAGGCAACAGCAGAGAATAGGA...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GAAGAGCGATACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGGGCACGTGGCCCGATTaGACGTTTCTGAAATGTCAG +
Preference number: 5 (lower is better)
Translates to: EERYTANWTPPWLFGNGTGTWPD*TFLKCQ
Trigger: CTGACATTTCAGAAACGTCAAATCGGGCCACGTGCC...CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTAAGCGTGGAGTCCCCCTaGCGGAAGTTTTCACTGGGA +
Preference number: 5 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVSVESP*RKFSLG
Trigger: TCCCAGTGAAAACTTCCGCAAGGGGGACTCCACGCT...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGGGGTTCCGGTTCATaGGCAGCGTGGAGTCCCCCT +
Preference number: 5 (lower is better)
Translates to: TEFLDVKEDKPKTMLAFGRGSGS*AAWSPP
Trigger: AGGGGGACTCCACGCTGCCAATGAACCGGAACCCCT...GCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAAGCCGTTCCCTGTCCTaGAGGCTTATGCTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQSRSLS*RLMLRE
Trigger: CTCCCGGAGCATAAGCCTCAAGGACAGGGAACGGCT...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCGTTGACCTCAAGGATACTAGGCATTTTCTaGTACACGCGTCTATTGCTG +
Preference number: 5 (lower is better)
Translates to: HHCGPDCPWNSTMPLTSRILGIF*YTRLLL
Trigger: CAGCAATAGACGCGTGTACAAGAAAATGCCTAGTAT...CCTTGAGGTCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATGGGTCCCTCGGGCCTTaGGCTCCAGATGTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: FSYISVGAMKWFATNRENGSLGP*APDVSW
Trigger: CCAAGACACATCTGGAGCCAAAGGCCCGAGGGACCC...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS CCA 90 bp ATCTTCAGCATGACCGTGGCTTGCTGCTGGATGGACGCTCCAAACTaGAAGAAGGTAGACGTCGGATCCTTAAGAAAATTACAGGCTGGT +
Preference number: 5 (lower is better)
Translates to: IFSMTVACCWMDAPN*KKVDVGSLRKLQAG
Trigger: ACCAGCCTGTAATTTTCTTAAGGATCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCTGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461292.3
CDS CCA 90 bp GCTCACTGCTCTTCCAGTGCTGCTCTGGACATCGATGGAATATTTTaGAAACATCCTTGGCTTCTGATGATGGAAGGGGAACCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: AHCSSSAALDIDGIF*KHPWLLMMEGEPSE
Trigger: CTCACTGGGTTCCCCTTCCATCATCAGAAGCCAAGGATGTTTCCAAAATATTCCATCGATGTCCAGAGCAGCACTGGAAGAGCAGTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568247.3
CDS CCA 90 bp TGCTGGATGGACGCTCCAAACTGGAAGAAGGTAGACGTCGGATCATaGGTGTCCCTTCACTTCAAATGTCAGCACAAGAGGTTTTTCCTG +
Preference number: 5 (lower is better)
Translates to: CWMDAPNWKKVDVGS*VSLHFKCQHKRFFL
Trigger: CAGGAAAAACCTCTTGTGCTGACATTTGAAGTGAAGGGACACCCATGATCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCATCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566670.2
CDS-3UTR CAA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTGTATGGTTCTCCCACTaGCCCACCTTTTCCCATTCC +
Preference number: 5 (lower is better)
Translates to: NASLLPTYPVGMSRRLALVWFSH*PTFSHS
Trigger: GGAATGGGAAAAGGTGGGCAAGTGGGAGAACCATAC...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AGAAGCCGTTCCCTGTCCTTGAGGCTTATGCTCCGGGAGGGCCTGCTAAGGTCTACATTCATCCCCTCATaGGTTGAATTGTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: RSRSLSLRLMLREGLLRSTFIPS*VELLIL
Trigger: CAAAATCAACAATTCAACCAATGAGGGGATGAATGT...AGACCTTAGCAGGCCCTCCCGGAGCATAAGCCTCAAGGACAGGGAACGGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTTGCCATGACTGCCCGTaGATAGACCACTTCACCGAT +
Preference number: 5 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKICHDCP*IDHFTD
Trigger: ATCGGTGAAGTGGTCTATCAACGGGCAGTCATGGCA...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTGGATTCTGTGCTCACGGCCACCTCCACCGTGTTAGGGTTGGACTCATTGAGATGGGGTGCTTTCCCTTaGGCTAAGTTTCTGTTGTAT +
Preference number: 5 (lower is better)
Translates to: LDSVLTATSTVLGLDSLRWGAFP*AKFLLY
Trigger: ATACAACAGAAACTTAGCCAAAGGGAAAGCACCCCA...TCTCAATGAGTCCAACCCTAACACGGTGGAGGTGGCCGTGAGCACAGAATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGACAGGCACGGAGTTATaGAACACCAGGCCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGTGTEL*NTRPQR
Trigger: TCTTTGGGGCCTGGTGTTCAATAACTCCGTGCCTGT...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ATACGGCTGTTGGTGCATGTCACCACATTAACAACTCTGGGAAGAGCGATACACACAGGCACGGAGTTATaGAACACCAGGCCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: IRLLVHVTTLTTLGRAIHTGTEL*NTRPQR
Trigger: TCTTTGGGGCCTGGTGTTCAATAACTCCGTGCCTGT...GTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACATGCACCAACAGCCGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTCTCGGGCAGGGTCACATTTTCAACAAACTGGGGTGGATCTAAGTGGAAACCAACTGAGGCCGGTCACTaGGTCCACAAATTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: FSGRVTFSTNWGGSKWKPTEAGH*VHKFLL
Trigger: CAAGAGGAATTTGTGGACCAAGTGACCGGCCTCAGT...TGGTTTCCACTTAGATCCACCCCAGTTTGTTGAAAATGTGACCCTGCCCGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp TCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGTACGATGCCAGGAGTTTTAACATGTaGCTCTGGGATCCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: SEIYTSLWPRLSLEQYDARSFNM*LWDPVR
Trigger: TCTGACGGGATCCCAGAGCAACATGTTAAAACTCCT...GGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp CCTGAAGCATCTGGTCTTCATCGATGTCATAGAGGTTCCCCATCCGCAGGCAGGCTTGAGGAGTTCATGTaGGACATGCTGGAAATGTTT +
Preference number: 5 (lower is better)
Translates to: PEASGLHRCHRGSPSAGRLEEFM*DMLEMF
Trigger: AAACATTTCCAGCATGTCCAACATGAACTCCTCAAG...CCTGCCTGCGGATGGGGAACCTCTATGACATCGATGAAGACCAGATGCTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCGGTCTAGAGTTCGCTTaGGATTCTGTGCTCACGGCC +
Preference number: 5 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTGLEFA*DSVLTA
Trigger: GGCCGTGAGCACAGAATCCAAAGCGAACTCTAGACC...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCGGTCTAGAGTTCGCTTaGGATTCTGTGCTCACGGCC +
Preference number: 5 (lower is better)
Translates to: SPLASNASLLPTYPVGMSGLEFA*DSVLTA
Trigger: GGCCGTGAGCACAGAATCCAAAGCGAACTCTAGACC...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATCCTATTCTCTGCTGTaGCCTCATCCCTCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMASYSLL*PHPSGR
Trigger: TCTCCCAGAGGGATGAGGCAACAGCAGAGAATAGGA...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTGGCACGTGGCCCGATTaGACGTTTCTGAAATGTCAG +
Preference number: 5 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIGTWPD*TFLKCQ
Trigger: CTGACATTTCAGAAACGTCAAATCGGGCCACGTGCC...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGGCACGTGGCCCGATTaGACGTTTCTGAAATGTCAG +
Preference number: 5 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMGTWPD*TFLKCQ
Trigger: CTGACATTTCAGAAACGTCAAATCGGGCCACGTGCC...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGACCTCACTACAGTCCTaGGGGTATTTGGAGGCCACT +
Preference number: 5 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVTSLQS*GYLEAT
Trigger: AGTGGCCTCCAAATACCCCAAGGACTGTAGTGAGGT...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCAGCGTGGAGTCCCCCTaGCGGAAGTTTTCACTGGGA +
Preference number: 5 (lower is better)
Translates to: QQNTSLHLLPLSRALLDISVESP*RKFSLG
Trigger: TCCCAGTGAAAACTTCCGCAAGGGGGACTCCACGCT...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACAGCGTGGAGTCCCCCTaGCGGAAGTTTTCACTGGGA +
Preference number: 5 (lower is better)
Translates to: SYISVGAMKWFATNRENNSVESP*RKFSLG
Trigger: TCCCAGTGAAAACTTCCGCAAGGGGGACTCCACGCT...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAAGGGGTTCCGGTTCATaGGCAGCGTGGAGTCCCCCT +
Preference number: 5 (lower is better)
Translates to: RANNNNNKIPPYIFFLLARGSGS*AAWSPP
Trigger: AGGGGGACTCCACGCTGCCAATGAACCGGAACCCCT...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTACTGTGCGGGGAACCCTaGTCTTTCAAGGTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVLCGEP*SFKVKC
Trigger: GCACTTCACCTTGAAAGACAAGGGTTCCCCGCACAG...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTCTGTGCGGGGAACCCTaGTCTTTCAAGGTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPLCGEP*SFKVKC
Trigger: GCACTTCACCTTGAAAGACAAGGGTTCCCCGCACAG...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTAGGCAGGCATCGCACTaGAAGGGGGACCTCATGGTG +
Preference number: 5 (lower is better)
Translates to: NPDLRKCHNIATILSGALRQASH*KGDLMV
Trigger: CACCATGAGGTCCCCCTTCAAGTGCGATGCCTGCCT...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTAAGAGACTTGCTCCTCTaGCTGTCCTCCAGACCTTGG +
Preference number: 5 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVRDLLL*LSSRPW
Trigger: CCAAGGTCTGGAGGACAGCAAGAGGAGCAAGTCTCT...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCCCAATAACCAAGCGTaGGTCATCCCTGTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHPNNQA*VIPVGV
Trigger: CACTCCCACAGGGATGACCAACGCTTGGTTATTGGG...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTAACAGTACGATGCCGTaGACCTCAAGGACGACCGAA +
Preference number: 5 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKINSTMP*TSRTTE
Trigger: TTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGTT...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTGAAATATACACATCATaGTGGCCCCGACTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: GIQCIIIANIPSRHVPETEIYTS*WPRLSL
Trigger: CAGGGACAGTCGGGGCCACAATGATGTGTATATTTC...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS CCA 90 bp TACACCATTTTCAGAAACAAGGCAAAAGGCATTTCCATTCATTTCTaGGTTGGAGAGGCAAGACCTGGTTCTCACCAGGGCCAGTGGCCA +
Preference number: 5 (lower is better)
Translates to: YTIFRNKAKGISIHF*VGEARPGSHQGQWP
Trigger: TGGCCACTGGCCCTGGTGAGAACCAGGTCTTGCCTCTCCAACCCAGAAATGAATGGAAATGCCTTTTGCCTTGTTTCTGAAAATGGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566665.1
CDS-3UTR CAA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACTGCGTGATGAGGCTCTaGGGGTCGGTGCGGTTCATC +
Preference number: 5 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYCVMRL*GSVRFI
Trigger: GATGAACCGCACCGACCCCAAGAGCCTCATCACGCA...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAACAGCATGACCGTGGCTaGCTGCTGGATGGACGCTCC +
Preference number: 5 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAEQHDRG*LLDGRS
Trigger: GGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCTG...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAATCCCATTCCCGGTCTTaGTTCAGCACAATCACCACC +
Preference number: 5 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHESHSRS*FSTITT
Trigger: GGTGGTGATTGTGCTGAACAAAGACCGGGAATGGGA...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTGCCATGACTGCCCGTaGATAGACCACTTCACCGAT +
Preference number: 5 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTCHDCP*IDHFTD
Trigger: ATCGGTGAAGTGGTCTATCAACGGGCAGTCATGGCA...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTACAGGCACGGAGTTATaGAACACCAGGCCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSTGTEL*NTRPQR
Trigger: TCTTTGGGGCCTGGTGTTCAATAACTCCGTGCCTGT...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGGGTGAGTCCATTCTaGAGGAGTTCATGTTGGACA +
Preference number: 5 (lower is better)
Translates to: GIQCIIIANIPSRHVPETWVSPF*RSSCWT
Trigger: TGTCCAACATGAACTCCTCAAGAATGGACTCACCCA...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCGGCACGTGGCCCGATTaGACGTTTCTGAAATGTCAG +
Preference number: 5 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTGTWPD*TFLKCQ
Trigger: CTGACATTTCAGAAACGTCAAATCGGGCCACGTGCC...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGAGCGTGGAGTCCCCCTaGCGGAAGTTTTCACTGGGA +
Preference number: 5 (lower is better)
Translates to: PPTERITQKGEIACLTKLSVESP*RKFSLG
Trigger: TCCCAGTGAAAACTTCCGCAAGGGGGACTCCACGCT...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCTGTGCGGGGAACCCTaGTCTTTCAAGGTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLLCGEP*SFKVKC
Trigger: GCACTTCACCTTGAAAGACAAGGGTTCCCCGCACAG...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACCTGTGCGGGGAACCCTaGTCTTTCAAGGTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: SYISVGAMKWFATNRENNLCGEP*SFKVKC
Trigger: GCACTTCACCTTGAAAGACAAGGGTTCCCCGCACAG...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCTGTGCGGGGAACCCTaGTCTTTCAAGGTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: QQNTSLHLLPLSRALLDILCGEP*SFKVKC
Trigger: GCACTTCACCTTGAAAGACAAGGGTTCCCCGCACAG...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCTCTGGCAAGAGAGACTaGCTCCTCTTGCTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: QQNTSLHLLPLSRALLDISGKRD*LLLLSS
Trigger: GGAGGACAGCAAGAGGAGCAAGTCTCTCTTGCCAGA...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTTCTGGCAAGAGAGACTaGCTCCTCTTGCTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLSGKRD*LLLLSS
Trigger: GGAGGACAGCAAGAGGAGCAAGTCTCTCTTGCCAGA...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AGTAGAGTTTATACTGGTCGTTGTTGGAAAGCCCCTCTTCATTATGCAAGGGGTCCCAATAACCAAGCGTaGGTCATCCCTGTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: SRVYTGRCWKAPLHYARGPNNQA*VIPVGV
Trigger: CACTCCCACAGGGATGACCAACGCTTGGTTATTGGG...ACCCCTTGCATAATGAAGAGGGGCTTTCCAACAACGACCAGTATAAACTCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTGACGACAGGCAGACAGATGGCATaGTACTTCTTACAGATCACA +
Preference number: 5 (lower is better)
Translates to: PGFRGHQRKTESLFGLTTGRQMA*YFLQIT
Trigger: TGTGATCTGTAAGAAGTACAATGCCATCTGTCTGCC...TGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCAAATGGAGGCGATCCTaGCTGGGGTGGATTAAGGTC +
Preference number: 5 (lower is better)
Translates to: SPLASNASLLPTYPVGMSKWRRS*LGWIKV
Trigger: GACCTTAATCCACCCCAGCAAGGATCGCCTCCATTT...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGCAAGATCACCTGGATTaGGCTCAAATTAGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: YLVSAMLSTHLTRFLEWKQDHLD*AQIRGL
Trigger: CAGGCCTCTAATTTGAGCCAAATCCAGGTGATCTTG...CTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS GCA 90 bp CTTCTCCTGCGATCACTTTCATGCTGGCCACATTTAGCTTCCGTTTaGCAGGATAAAGCTCTCAGCAAGTCCTTGTCAGCCATGATCATA +
Preference number: 5 (lower is better)
Translates to: LLLRSLSCWPHLASV*QDKALSKSLSAMII
Trigger: TATGATCATGGCTGACAAGGACTTGCTGAGAGCTTTATCCTGGCAAACGGAAGCTAAATGTGGCCAGCATGAAAGTGATCGCAGGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637334.1
CDS CCA 90 bp GTTTCTCTCCGTGCTTCCATTAGGCACTGTCCCAAATCGAAAAGGTaGGGAATAGTCATGAGGTCTCTGAAACTTTTTGTCACTGAGGCC +
Preference number: 5 (lower is better)
Translates to: VSLRASIRHCPKSKR*GIVMRSLKLFVTEA
Trigger: GGCCTCAGTGACAAAAAGTTTCAGAGACCTCATGACTATTCCCCACCTTTTCGATTTGGGACAGTGCCTAATGGAAGCACGGAGAGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000535259.6
ENST00000562109.5
ENST00000636273.2
ENST00000674742.1
ENST00000675398.1
CDS CCA 90 bp TGTAAGCAAGCAAACAATGACAACAGCAAAACTCTGATCCCACTTTaGGAGACAACAAGCCCTTTCTTACGGGTGCAAGGTGTGCATCGG +
Preference number: 5 (lower is better)
Translates to: CKQANNDNSKTLIPL*ETTSPFLRVQGVHR
Trigger: CCGATGCACACCTTGCACCCGTAAGAAAGGGCTTGTTGTCTCCCAAAGTGGGATCAGAGTTTTGCTGTTGTCATTGTTTGCTTGCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568247.3
ENST00000637393.1
CDS-3UTR CAA 90 bp TCTGCATTTTCAGTGCGTATTTCCAACAATGAGTATGTAAGCAAGCAAACAATGCAGCATGACCGTGGCTaGCTGCTGGATGGACGCTCC +
Preference number: 5 (lower is better)
Translates to: SAFSVRISNNEYVSKQTMQHDRG*LLDGRS
Trigger: GGAGCGTCCATCCAGCAGCAAGCCACGGTCATGCTG...CATTGTTTGCTTGCTTACATACTCATTGTTGGAAATACGCACTGAAAATGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR CAA 90 bp TTGCATGTGCGTGCTATTACCCATGGACAGAGACCCAACCGTTTGCATTCAAGTGCTGGACTTGTGTCTTaGCATCCTCAAAGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: LHVRAITHGQRPNRLHSSAGLVS*HPQRKC
Trigger: ACACTTCCTTTGAGGATGCAAAGACACAAGTCCAGC...ACTTGAATGCAAACGGTTGGGTCTCTGTCCATGGGTAATAGCACGCACATGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAGTATGGTTCTCCCACTaGCCCACCTTTTCCCATTCC +
Preference number: 5 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQVWFSH*PTFSHS
Trigger: GGAATGGGAAAAGGTGGGCAAGTGGGAGAACCATAC...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGTATGGTTCTCCCACTaGCCCACCTTTTCCCATTCC +
Preference number: 5 (lower is better)
Translates to: LGDINVLVYAALNKTIEAVWFSH*PTFSHS
Trigger: GGAATGGGAAAAGGTGGGCAAGTGGGAGAACCATAC...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTGTATGGTTCTCCCACTaGCCCACCTTTTCCCATTCC +
Preference number: 5 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLVWFSH*PTFSHS
Trigger: GGAATGGGAAAAGGTGGGCAAGTGGGAGAACCATAC...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGCAGTCGGAGAAGGACTaGTACCTGGGCCACACGGCG +
Preference number: 5 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWQSEKD*YLGHTA
Trigger: CGCCGTGTGGCCCAGGTACAAGTCCTTCTCCGACTG...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTACGATGCTGAGATGGTaGTCATCCGGCTCACAGTCG +
Preference number: 5 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSTMLRW*SSGSQS
Trigger: CGACTGTGAGCCGGATGACAACCATCTCAGCATCGT...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCTCAGAACGTTCCTCATaGATGGTGAGCGAGCCAACT +
Preference number: 5 (lower is better)
Translates to: SPLASNASLLPTYPVGMSSERSS*MVSEPT
Trigger: AGTTGGCTCGCTCACCATCAATGAGGAACGTTCTGA...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCAACAGATACCATGATCTaGCTGGTGGTCCCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMATDTMI*LVVPLG
Trigger: TCCTAAAGGGACCACCAGCAAGATCATGGTATCTGT...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATACTGAGGCCGGTCACTaGGTCCACAAATTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: CTSYRSQYTYGCWCMSPHTEAGH*VHKFLL
Trigger: CAAGAGGAATTTGTGGACCAAGTGACCGGCCTCAGT...ATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTTGGGATCCCGTCAGATaGAAGTCTGGAGACTTCTTC +
Preference number: 5 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPWDPVR*KSGDFF
Trigger: GAAGAAGTCTCCAGACTTCAATCTGACGGGATCCCA...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATGGGATCCCGTCAGATaGAAGTCTGGAGACTTCTTC +
Preference number: 5 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVWDPVR*KSGDFF
Trigger: GAAGAAGTCTCCAGACTTCAATCTGACGGGATCCCA...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTAGGAGTTTTAACATGTaGCTCTGGGATCCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: NASLLPTYPVGMSRRLALRSFNM*LWDPVR
Trigger: TCTGACGGGATCCCAGAGCAACATGTTAAAACTCCT...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ATACGGCTGTTGGTGCATGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGGAGTTTTAACATGTaGCTCTGGGATCCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: IRLLVHVTTLTTLGRAIHRSFNM*LWDPVR
Trigger: TCTGACGGGATCCCAGAGCAACATGTTAAAACTCCT...GTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACATGCACCAACAGCCGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTATGCTGGAAATGTTTTaGGCTGACCGGAGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: GIQCIIIANIPSRHVPETMLEMF*ADRRSF
Trigger: AAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCAT...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGATGCTGGAAATGTTTTaGGCTGACCGGAGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGEMLEMF*ADRRSF
Trigger: AAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCAT...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CATAACATAGCAACTATCTTGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTGTGGGTGAGTCCATTCTaGAGGAGTTCATGTTGGACA +
Preference number: 5 (lower is better)
Translates to: HNIATILSGALVFVAGTVWVSPF*RSSCWT
Trigger: TGTCCAACATGAACTCCTCAAGAATGGACTCACCCA...CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAAGTCAGCAGCTCTTTaGGGTGAGTCCATTCTTGAG +
Preference number: 5 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVKSAAL*GESILE
Trigger: CTCAAGAATGGACTCACCCAAAAGAGCTGCTGACTT...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGAAGTCAGCAGCTCTTTaGGGTGAGTCCATTCTTGAG +
Preference number: 5 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQKSAAL*GESILE
Trigger: CTCAAGAATGGACTCACCCAAAAGAGCTGCTGACTT...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACGATGAGGGAACCTCTTaGGATGAAGTCAGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHDEGTS*DEVSSS
Trigger: AGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCATC...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTTTATCCTTCTGCCGGTaGGCCACAAATGTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKILSFCR*ATNVWS
Trigger: ACTCCAAACATTTGTGGCCAACCGGCAGAAGGATAA...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTTCCACCGTGTTAGGGTaGGACTCATTGAGAGTAAGA +
Preference number: 5 (lower is better)
Translates to: NASLLPTYPVGMSRRLALSTVLG*DSLRVR
Trigger: TCTTACTCTCAATGAGTCCAACCCTAACACGGTGGA...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCTCCTATTCTCTGCTGTaGCCTCATCCCTCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: LGDINVLVYAALNKTIEASYSLL*PHPSGR
Trigger: TCTCCCAGAGGGATGAGGCAACAGCAGAGAATAGGA...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTACCTCACTACAGTCCTaGGGGTATTTGGAGGCCACT +
Preference number: 5 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLTSLQS*GYLEAT
Trigger: AGTGGCCTCCAAATACCCCAAGGACTGTAGTGAGGT...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCACCTCACTACAGTCCTaGGGGTATTTGGAGGCCACT +
Preference number: 5 (lower is better)
Translates to: QQNTSLHLLPLSRALLDITSLQS*GYLEAT
Trigger: AGTGGCCTCCAAATACCCCAAGGACTGTAGTGAGGT...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GCTGCCGTAAAAATTTCCCTCCAGAAGCCGTTCCCTGTCCTTGAGGCTTATGCTTTATACTGGTCGTTGTaGGAAAGCCCCTCTTCATTA +
Preference number: 5 (lower is better)
Translates to: AAVKISLQKPFPVLEAYALYWSL*ESPSSL
Trigger: TAATGAAGAGGGGCTTTCCAACAACGACCAGTATAA...AGCATAAGCCTCAAGGACAGGGAACGGCTTCTGGAGGGAAATTTTTACGGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp GGCGTCTTCGGGATAAACTACAATGGCCACTGTGTCACAGACAGAAGATCCACAAGTTTATACTGGTCGTaGTTGGAAAGCCCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: GVFGINYNGHCVTDRRSTSLYWS*LESPSS
Trigger: TGAAGAGGGGCTTTCCAACAACGACCAGTATAAACT...TGTGGATCTTCTGTCTGTGACACAGTGGCCATTGTAGTTTATCCCGAAGACGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAAGTTTATACTGGTCGTaGTTGGAAAGCCCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQSLYWS*LESPSS
Trigger: TGAAGAGGGGCTTTCCAACAACGACCAGTATAAACT...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCAGGCAGGCATCGCACTaGAAGGGGGACCTCATGGTG +
Preference number: 5 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFRQASH*KGDLMV
Trigger: CACCATGAGGTCCCCCTTCAAGTGCGATGCCTGCCT...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCGCTGTCCTCCAGACCTaGGGGGAAAAGGGAGCTTTT +
Preference number: 5 (lower is better)
Translates to: TEFLDVKEDKPKTMLAFGAVLQT*GEKGAF
Trigger: AAAAGCTCCCTTTTCCCCCAAGGTCTGGAGGACAGC...GCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGAAACAGTACGATGCCGTaGACCTCAAGGACGACCGAA +
Preference number: 5 (lower is better)
Translates to: RRHKCVSLCSSEQDHRSRNSTMP*TSRTTE
Trigger: TTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGTT...TCGGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TGTACCTATCTGAGGACTAGTTGGGTCCTTCTCAAGTGGGGAAAACCAATTAGAAACAGTACGATGCCGTaGACCTCAAGGACGACCGAA +
Preference number: 5 (lower is better)
Translates to: CTYLRTSWVLLKWGKPIRNSTMP*TSRTTE
Trigger: TTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGTT...TCTAATTGGTTTTCCCCACTTGAGAAGGACCCAACTAGTCCTCAGATAGGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp ACAGATGGCATTGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCAAACAGTACGATGCCGTaGACCTCAAGGACGACCGAA +
Preference number: 5 (lower is better)
Translates to: TDGIVLLTDHSTHTAVGANSTMP*TSRTTE
Trigger: TTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGTT...TGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACAATGCCATCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AGCATAAGGCATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCGAAATATACACATCATaGTGGCCCCGACTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: SIRHNMLRNIHIIVAPTVEIYTS*WPRLSL
Trigger: CAGGGACAGTCGGGGCCACAATGATGTGTATATTTC...GACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGCTTAGCAGGGCACTATaGGACATCCAACATTTACCC +
Preference number: 5 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQLSRAL*DIQHLP
Trigger: GGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAAG...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp CTCTTTAGGGAGTGGGTCCTATTCTCTGCTGTTGCCTCATCCCTCTGGGAGACTAAACTTCCTAATCTCTaGCACATGTCAATCGCACTA +
Preference number: 5 (lower is better)
Translates to: LFREWVLFSAVASSLWETKLPNL*HMSIAL
Trigger: TAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTT...AGTCTCCCAGAGGGATGAGGCAACAGCAGAGAATAGGACCCACTCCCTAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGCACGAACACACTGATTaGCTATTCTTTAGGGGAGCC +
Preference number: 5 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVHEHTD*LFFRGA
Trigger: GGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTCACCACCATGGCTGTTaGGAAACGGAACGAGTTATG +
Preference number: 5 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPHHHGC*ETERVM
Trigger: CATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTG...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GAAGAGCGATACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGAGTGCCTCGTGTTTaGAAGGCTTTTGATTTGAGG +
Preference number: 5 (lower is better)
Translates to: EERYTANWTPPWLFGNGTRVPRV*KAFDLR
Trigger: CCTCAAATCAAAAGCCTTCAAAACACGAGGCACTCT...CGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGAGAACTGTATCCACAGTTaGGAGGATACTCAGGGTAGA +
Preference number: 5 (lower is better)
Translates to: HEHTDLLFFRGAWSSWGENCIHS*EDTQGR
Trigger: TCTACCCTGAGTATCCTCCAAACTGTGGATACAGTT...CTCACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGAAAATGGAGGCGATCCTaGCTGGGGTGGATTAAGGTC +
Preference number: 5 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRKWRRS*LGWIKV
Trigger: GACCTTAATCCACCCCAGCAAGGATCGCCTCCATTT...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CCTGGGTTTAGAGGACACCAGAGGAAGACAGAAAGCCTCTTTGGCTTGACGACACTGAAACTCAGGCATTaGTGTTCAGAAATTTGGGCT +
Preference number: 5 (lower is better)
Translates to: PGFRGHQRKTESLFGLTTLKLRH*CSEIWA
Trigger: AGCCCAAATTTCTGAACACAAATGCCTGAGTTTCAG...TGTCGTCAAGCCAAAGAGGCTTTCTGTCTTCCTCTGGTGTCCTCTAAACCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGCAGAGACCCAACCGTTaGCATTCAAGTGTACCTATC +
Preference number: 5 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVQRPNR*HSSVPI
Trigger: GATAGGTACACTTGAATGCAAACGGTTGGGTCTCTG...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp ATACGGCTGTTGGTGCATGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTGGTCAATGTGCTaGGTTCTTCCTCAATGCATG +
Preference number: 5 (lower is better)
Translates to: IRLLVHVTTLTTLGRAIHSWSMC*VLPQCM
Trigger: CATGCATTGAGGAAGAACCAAGCACATTGACCAGCT...GTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACATGCACCAACAGCCGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp ATACGGCTGTTGGTGCATGTCACCACATTAACAACTCTGGGAAGAGCGATACACCTGTTTAGTCTCTGTTaGCATTGCATGGGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: IRLLVHVTTLTTLGRAIHLFSLC*HCMGPW
Trigger: CCAAGGACCCATGCAATGCAAACAGAGACTAAACAG...GTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACATGCACCAACAGCCGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp TATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGTGGTTCCCTGGAGAGTaGCATGCTTTGAAATACAAC +
Preference number: 5 (lower is better)
Translates to: YLVSAMLSTHLTRFLEWKWFPGE*HALKYN
Trigger: GTTGTATTTCAAAGCATGCAACTCTCCAGGGAACCA...CTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACAAGATCACCTGGATTaGGCTCAAATTAGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: LASNASLLPTYPVGMSRRQDHLD*AQIRGL
Trigger: CAGGCCTCTAATTTGAGCCAAATCCAGGTGATCTTG...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTGTAGACGTCGGATCCTaGTCAGCCATGATCATAGAT +
Preference number: 5 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSVDVGS*SAMIID
Trigger: ATCTATGATCATGGCTGACAAGGATCCGACGTCTAC...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000675398.1
CDS-3UTR CAA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTAGTAGACGTCGGATCCTaGTCAGCCATGATCATAGAT +
Preference number: 5 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVVDVGS*SAMIID
Trigger: ATCTATGATCATGGCTGACAAGGATCCGACGTCTAC...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTGCTGGACTTGTGTCTTaGCATCCTCAAAGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSAGLVS*HPQRKC
Trigger: ACACTTCCTTTGAGGATGCAAAGACACAAGTCCAGC...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGCTTCTTCAGCTGGACTaGTGTCTTTGCATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: SRALLDIQHLPSRTLAITLLQLD*CLCILK
Trigger: TTTGAGGATGCAAAGACACAAGTCCAGCTGAAGAAG...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTTCCCATTCCCGGTCTTaGTTCAGCACAATCACCACC +
Preference number: 5 (lower is better)
Translates to: PNLLHMSIALQCRCILNCSHSRS*FSTITT
Trigger: GGTGGTGATTGTGCTGAACAAAGACCGGGAATGGGA...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACATCCCATTCCCGGTCTTaGTTCAGCACAATCACCACC +
Preference number: 5 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTSHSRS*FSTITT
Trigger: GGTGGTGATTGTGCTGAACAAAGACCGGGAATGGGA...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCCATTCCCGGTCTTaGTTCAGCACAATCACCACC +
Preference number: 5 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSSHSRS*FSTITT
Trigger: GGTGGTGATTGTGCTGAACAAAGACCGGGAATGGGA...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTGCCCACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGACGATGCTGAGATGGTaGTCATCCGGCTCACAGTCG +
Preference number: 5 (lower is better)
Translates to: LPTCKKIILTKQNAHHEETMLRW*SSGSQS
Trigger: CGACTGTGAGCCGGATGACAACCATCTCAGCATCGT...CTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGTGGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCAGTTGAATTGTTGATTTaGACGAACTTCCGACATGGC +
Preference number: 5 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLAVELLI*TNFRHG
Trigger: GCCATGTCGGAAGTTCGTCAAAATCAACAATTCAAC...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGATCAATGCAGAACCCCTaGCAGCATTTCTTCACATTC +
Preference number: 5 (lower is better)
Translates to: LASNASLLPTYPVGMSRRSMQNP*QHFFTF
Trigger: GAATGTGAAGAAATGCTGCAAGGGGTTCTGCATTGA...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATTCAGAACGTTCCTCATaGATGGTGAGCGAGCCAACT +
Preference number: 5 (lower is better)
Translates to: RALLDIQHLPSRTLAITYSERSS*MVSEPT
Trigger: AGTTGGCTCGCTCACCATCAATGAGGAACGTTCTGA...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTTCAGAACGTTCCTCATaGATGGTGAGCGAGCCAACT +
Preference number: 5 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLSERSS*MVSEPT
Trigger: AGTTGGCTCGCTCACCATCAATGAGGAACGTTCTGA...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTACAGGCACGGAGTTATaGAACACCAGGCCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSTGTEL*NTRPQR
Trigger: TCTTTGGGGCCTGGTGTTCAATAACTCCGTGCCTGT...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTACAGATACCATGATCTaGCTGGTGGTCCCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSTDTMI*LVVPLG
Trigger: TCCTAAAGGGACCACCAGCAAGATCATGGTATCTGT...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTACTGAGGCCGGTCACTaGGTCCACAAATTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSTEAGH*VHKFLL
Trigger: CAAGAGGAATTTGTGGACCAAGTGACCGGCCTCAGT...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ATAAGGCATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTAGGAGTTTTAACATGTaGCTCTGGGATCCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: IRHNMLRNIHIIVAPTVPRSFNM*LWDPVR
Trigger: TCTGACGGGATCCCAGAGCAACATGTTAAAACTCCT...AGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp ATAAGGCATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTTGGGTGAGTCCATTCTaGAGGAGTTCATGTTGGACA +
Preference number: 5 (lower is better)
Translates to: IRHNMLRNIHIIVAPTVPWVSPF*RSSCWT
Trigger: TGTCCAACATGAACTCCTCAAGAATGGACTCACCCA...AGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGGATGAGGGAACCTCTTaGGATGAAGTCAGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQDEGTS*DEVSSS
Trigger: AGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCATC...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGAGTTGGCCACAAATGTTaGGAGTTCGTTCATGTTGTC +
Preference number: 5 (lower is better)
Translates to: LASNASLLPTYPVGMSRRVGHKC*EFVHVV
Trigger: GACAACATGAACGAACTCCAAACATTTGTGGCCAAC...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATTATCCTTCTGCCGGTaGGCCACAAATGTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVLSFCR*ATNVWS
Trigger: ACTCCAAACATTTGTGGCCAACCGGCAGAAGGATAA...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTGAGAGTAAGAGGATGTaGTCCCTGGAATACATAGTT +
Preference number: 5 (lower is better)
Translates to: GIQCIIIANIPSRHVPETESKRM*SLEYIV
Trigger: AACTATGTATTCCAGGGACAACATCCTCTTACTCTC...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AGCATAAGGCATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCTCCACCGTGTTAGGGTaGGACTCATTGAGAGTAAGA +
Preference number: 5 (lower is better)
Translates to: SIRHNMLRNIHIIVAPTVSTVLG*DSLRVR
Trigger: TCTTACTCTCAATGAGTCCAACCCTAACACGGTGGA...GACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAGGTCTAGAGTTCGCTTaGGATTCTGTGCTCACGGCC +
Preference number: 5 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSGLEFA*DSVLTA
Trigger: GGCCGTGAGCACAGAATCCAAAGCGAACTCTAGACC...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTGGCACGTGGCCCGATTaGACGTTTCTGAAATGTCAG +
Preference number: 5 (lower is better)
Translates to: NPDLRKCHNIATILSGALGTWPD*TFLKCQ
Trigger: CTGACATTTCAGAAACGTCAAATCGGGCCACGTGCC...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAACCTCACTACAGTCCTaGGGGTATTTGGAGGCCACT +
Preference number: 5 (lower is better)
Translates to: NIRFDTRHFLVHASIAAGTSLQS*GYLEAT
Trigger: AGTGGCCTCCAAATACCCCAAGGACTGTAGTGAGGT...TCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp CATAACATAGCAACTATCTTGTCGGGGGCACTTGTTTTTGTGGCAGGCACTGTGAGTTTATACTGGTCGTaGTTGGAAAGCCCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: HNIATILSGALVFVAGTVSLYWS*LESPSS
Trigger: TGAAGAGGGGCTTTCCAACAACGACCAGTATAAACT...CACAGTGCCTGCCACAAAAACAAGTGCCCCCGACAAGATAGTTGCTATGTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCAGGCATCGCACTaGAAGGGGGACCTCATGGTG +
Preference number: 5 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWRQASH*KGDLMV
Trigger: CACCATGAGGTCCCCCTTCAAGTGCGATGCCTGCCT...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATATTATTCTTATTTGCAAGGCAGGCATCGCACTaGAAGGGGGACCTCATGGTG +
Preference number: 5 (lower is better)
Translates to: LLQEFKTLGVEYILFLFARQASH*KGDLMV
Trigger: CACCATGAGGTCCCCCTTCAAGTGCGATGCCTGCCT...TGCAAATAAGAATAATATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTGCTGTCCTCCAGACCTaGGGGGAAAAGGGAGCTTTT +
Preference number: 5 (lower is better)
Translates to: ALLDIQHLPSRTLAITYIAVLQT*GEKGAF
Trigger: AAAAGCTCCCTTTTCCCCCAAGGTCTGGAGGACAGC...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTGCCCACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGTCTGGCAAGAGAGACTaGCTCCTCTTGCTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LPTCKKIILTKQNAHHEESGKRD*LLLLSS
Trigger: GGAGGACAGCAAGAGGAGCAAGTCTCTCTTGCCAGA...CTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGTGGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACGAAATATACACATCATaGTGGCCCCGACTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: SYISVGAMKWFATNRENNEIYTS*WPRLSL
Trigger: CAGGGACAGTCGGGGCCACAATGATGTGTATATTTC...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGTTGTACACGCGTCTATaGCTGCAGGAATTTAAAACC +
Preference number: 5 (lower is better)
Translates to: YLVSAMLSTHLTRFLEWKLYTRL*LQEFKT
Trigger: GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA...CTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATACTAGGCATTTTCTaGTACACGCGTCTATTGCTG +
Preference number: 5 (lower is better)
Translates to: YLVSAMLSTHLTRFLEWKILGIF*YTRLLL
Trigger: CAGCAATAGACGCGTGTACAAGAAAATGCCTAGTAT...CTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCCTTAGCAGGGCACTATaGGACATCCAACATTTACCC +
Preference number: 5 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTLSRAL*DIQHLP
Trigger: GGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAAG...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTGGGTCCCTCGGGCCTTaGGCTCCAGATGTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: GIWNIGNHNITIGIQCIIGSLGP*APDVSW
Trigger: CCAAGACACATCTGGAGCCAAAGGCCCGAGGGACCC...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ATACGGCTGTTGGTGCATGTCACCACATTAACAACTCTGGGAAGAGCGATACACTTGAAGGCTTTTGATTaGAGGAGTTTGGGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: IRLLVHVTTLTTLGRAIHLKAFD*RSLGWK
Trigger: CTTCCACCCCAAACTCCTCAAATCAAAAGCCTTCAA...GTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACATGCACCAACAGCCGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGAGAGTGCCTCGTGTTTaGAAGGCTTTTGATTTGAGG +
Preference number: 5 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGRVPRV*KAFDLR
Trigger: CCTCAAATCAAAAGCCTTCAAAACACGAGGCACTCT...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGAACTGTATCCACAGTTaGGAGGATACTCAGGGTAGA +
Preference number: 5 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGNCIHS*EDTQGR
Trigger: TCTACCCTGAGTATCCTCCAAACTGTGGATACAGTT...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CCCTTCTGCCTTTCAAAAATGAAAGGAAGCTCCTCTCACCCACTGCCTCCCTCTCATATATGCACAGGTTaGAGGAGAATAAGAATGGGA +
Preference number: 5 (lower is better)
Translates to: PFCLSKMKGSSSHPLPPSHICTG*RRIRMG
Trigger: TCCCATTCTTATTCTCCTCAAACCTGTGCATATATG...AGAGGGAGGCAGTGGGTGAGAGGAGCTTCCTTTCATTTTTGAAAGGCAGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTGCATTGCATGGGTCCTaGGTTATCCTTTGTATTAGA +
Preference number: 5 (lower is better)
Translates to: GIQCIIIANIPSRHVPETALHGS*VILCIR
Trigger: TCTAATACAAAGGATAACCAAGGACCCATGCAATGC...AGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTAGGAGAGTTGCATGCTTaGAAATACAACCCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVGELHA*KYNPQR
Trigger: TCTCTGGGGGTTGTATTTCAAAGCATGCAACTCTCC...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCGGAGAGTTGCATGCTTaGAAATACAACCCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: SPLASNASLLPTYPVGMSGELHA*KYNPQR
Trigger: TCTCTGGGGGTTGTATTTCAAAGCATGCAACTCTCC...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTCTGGTAAAGAAATCTTaGGGGACCCTCAGGTTTGGA +
Preference number: 5 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPLVKKS*GTLRFG
Trigger: TCCAAACCTGAGGGTCCCCAAAGATTTCTTTACCAG...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATGACCGGGCACTTCTGTaGCCTCAGGAGTTATATACA +
Preference number: 5 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHDRALL*PQELYT
Trigger: TGTATATAACTCCTGAGGCAACAGAAGTGCCCGGTC...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS TCA 90 bp CTGACCGGAGGAGTTTTAACATGTTGCTCTGGGATCCCGTCAGATTaGAGTCTGGAGACTTCTTCTTTTCTTCAATGTGCACTCCATGAA +
Preference number: 5 (lower is better)
Translates to: LTGGVLTCCSGIPSD*SLETSSFLQCALHE
Trigger: TTCATGGAGTGCACATTGAAGAAAAGAAGAAGTCTCCAGACTTCAATCTGACGGGATCCCAGAGCAACATGTTAAAACTCCTCCGGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000463531.1
ENST00000535259.6
ENST00000562109.5
ENST00000636273.2
ENST00000674742.1
ENST00000675398.1
CDS GCA 90 bp AGTATTTCTTCCCAGCCACACTGCTTCCTGCCACATTCATTCACTTaGTTGTCCATTTGCCGTCTCTGTCCTTATACAGAAACGTCATCT +
Preference number: 5 (lower is better)
Translates to: SISSQPHCFLPHSFT*LSICRLCPYTETSS
Trigger: AGATGACGTTTCTGTATAAGGACAGAGACGGCAAATGGACAAGCAAGTGAATGAATGTGGCAGGAAGCAGTGTGGCTGGGAAGAAATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566670.2
ENST00000566683.1
CDS CCA 90 bp GTATGTCACCCTTCAGGTCCTAGCTCAATGAACATCCTTTCCCATTaGACCATCTTATCTAACGTAGTGTCTGCACCCCATCACTATCAT +
Preference number: 5 (lower is better)
Translates to: VCHPSGPSSMNILSH*TILSNVVSAPHHYH
Trigger: ATGATAGTGATGGGGTGCAGACACTACGTTAGATAAGATGGTCCAATGGGAAAGGATGTTCATTGAGCTAGGACCTGAAGGGTGACATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675189.1
CDS-3UTR CAA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCGCTGGACTTGTGTCTTaGCATCCTCAAAGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: EAVCKRANNNNNKIPPYIAGLVS*HPQRKC
Trigger: ACACTTCCTTTGAGGATGCAAAGACACAAGTCCAGC...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCATCCCATTCCCGGTCTTaGTTCAGCACAATCACCACC +
Preference number: 5 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSSHSRS*FSTITT
Trigger: GGTGGTGATTGTGCTGAACAAAGACCGGGAATGGGA...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGGTTGAATTGTTGATTTaGACGAACTTCCGACATGGC +
Preference number: 5 (lower is better)
Translates to: SRALLDIQHLPSRTLAITVELLI*TNFRHG
Trigger: GCCATGTCGGAAGTTCGTCAAAATCAACAATTCAAC...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGGTTGAATTGTTGATTTaGACGAACTTCCGACATGGC +
Preference number: 5 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGVELLI*TNFRHG
Trigger: GCCATGTCGGAAGTTCGTCAAAATCAACAATTCAAC...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TATGGAATCCACGGATTTCTTCCACAGCTGCCGGGGTCTAGAGTTCGCTTTGGATCATTGGTTGAATTGTaGATTTTGACGAACTTCCGA +
Preference number: 5 (lower is better)
Translates to: YGIHGFLPQLPGSRVRFGSLVEL*ILTNFR
Trigger: TCGGAAGTTCGTCAAAATCAACAATTCAACCAATGA...TCCAAAGCGAACTCTAGACCCCGGCAGCTGTGGAAGAAATCCGTGGATTCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCACCCTCATTGGTTGAATaGTTGATTTTGACGAACTTC +
Preference number: 5 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLAPSLVE*LILTNF
Trigger: GAAGTTCGTCAAAATCAACAATTCAACCAATGAGGG...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTTCAATGCAGAACCCCTaGCAGCATTTCTTCACATTC +
Preference number: 5 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPSMQNP*QHFFTF
Trigger: GAATGTGAAGAAATGCTGCAAGGGGTTCTGCATTGA...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GAGGTTATCCTTCTGCCGGTTGGCCACAAATGTTTGGAGTTCGTTCATGTTGTCACATTGTTAACTTTCTaGCCATGCTTCCCATTGGTC +
Preference number: 5 (lower is better)
Translates to: EVILLPVGHKCLEFVHVVTLLTF*PCFPLV
Trigger: GACCAATGGGAAGCATGGCAAGAAAGTTAACAATGT...GACAACATGAACGAACTCCAAACATTTGTGGCCAACCGGCAGAAGGATAACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675398.1
CDS-3UTR CAA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACTGGGGTGCTTTCCCTTaGGCTAAGTTTCTGTTGTAT +
Preference number: 5 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHWGAFP*AKFLLY
Trigger: ATACAACAGAAACTTAGCCAAAGGGAAAGCACCCCA...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTTGGGGTGCTTTCCCTTaGGCTAAGTTTCTGTTGTAT +
Preference number: 5 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPWGAFP*AKFLLY
Trigger: ATACAACAGAAACTTAGCCAAAGGGAAAGCACCCCA...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAACAGATACCATGATCTaGCTGGTGGTCCCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQTDTMI*LVVPLG
Trigger: TCCTAAAGGGACCACCAGCAAGATCATGGTATCTGT...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGAACAGATACCATGATCTaGCTGGTGGTCCCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRTDTMI*LVVPLG
Trigger: TCCTAAAGGGACCACCAGCAAGATCATGGTATCTGT...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAACTGAGGCCGGTCACTaGGTCCACAAATTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSTEAGH*VHKFLL
Trigger: CAAGAGGAATTTGTGGACCAAGTGACCGGCCTCAGT...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ACAGATGGCATTGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCAAGGAGTTTTAACATGTaGCTCTGGGATCCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: TDGIVLLTDHSTHTAVGARSFNM*LWDPVR
Trigger: TCTGACGGGATCCCAGAGCAACATGTTAAAACTCCT...TGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACAATGCCATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTAATGCTGGAAATGTTTTaGGCTGACCGGAGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVMLEMF*ADRRSF
Trigger: AAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCAT...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGACTTGCCCTTCTTGAGGAGTTCATGTaGGACATGCTGGAAATGTTT +
Preference number: 5 (lower is better)
Translates to: NASLLPTYPVGMSRRLALLEEFM*DMLEMF
Trigger: AAACATTTCCAGCATGTCCAACATGAACTCCTCAAG...AAGGGCAAGTCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGAAGTCAGCAGCTCTTTaGGGTGAGTCCATTCTTGAG +
Preference number: 5 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQKSAAL*GESILE
Trigger: CTCAAGAATGGACTCACCCAAAAGAGCTGCTGACTT...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTGATGAGGGAACCTCTTaGGATGAAGTCAGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: PNLLHMSIALQCRCILNCDEGTS*DEVSSS
Trigger: AGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCATC...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCAGTTGGCCACAAATGTTaGGAGTTCGTTCATGTTGTC +
Preference number: 5 (lower is better)
Translates to: DVKEDKPKTMLAFGRQMAVGHKC*EFVHVV
Trigger: GACAACATGAACGAACTCCAAACATTTGTGGCCAAC...TGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATTATCCTTCTGCCGGTaGGCCACAAATGTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRLSFCR*ATNVWS
Trigger: ACTCCAAACATTTGTGGCCAACCGGCAGAAGGATAA...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGATTGAGAGTAAGAGGATGTaGTCCCTGGAATACATAGTT +
Preference number: 5 (lower is better)
Translates to: LRTHLSGVCHAQHTPHKIESKRM*SLEYIV
Trigger: AACTATGTATTCCAGGGACAACATCCTCTTACTCTC...AATCTTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGTCCACCGTGTTAGGGTaGGACTCATTGAGAGTAAGA +
Preference number: 5 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQSTVLG*DSLRVR
Trigger: TCTTACTCTCAATGAGTCCAACCCTAACACGGTGGA...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCATCCTATTCTCTGCTGTaGCCTCATCCCTCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: RANNNNNKIPPYIFFLLASYSLL*PHPSGR
Trigger: TCTCCCAGAGGGATGAGGCAACAGCAGAGAATAGGA...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CACAGTTTGGAGGATACTCAGGGTAGATCCAAGAGTGCCTCGTGTTTTGAAGGCAAGTTGTCCTTGGTTTaGTGGTTCTTACTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: HSLEDTQGRSKSASCFEGKLSLV*WFLLLS
Trigger: TGACAACAGTAAGAACCACAAAACCAAGGACAACTT...GCCTTCAAAACACGAGGCACTCTTGGATCTACCCTGAGTATCCTCCAAACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCAAAGTTGTCCTTGGTTTaGTGGTTCTTACTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLAKLSLV*WFLLLS
Trigger: TGACAACAGTAAGAACCACAAAACCAAGGACAACTT...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACAGCGTGGAGTCCCCCTaGCGGAAGTTTTCACTGGGA +
Preference number: 5 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYSVESP*RKFSLG
Trigger: TCCCAGTGAAAACTTCCGCAAGGGGGACTCCACGCT...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTTATACTGGTCGTTGTaGGAAAGCCCCTCTTCATTA +
Preference number: 5 (lower is better)
Translates to: SRALLDIQHLPSRTLAITLYWSL*ESPSSL
Trigger: TAATGAAGAGGGGCTTTCCAACAACGACCAGTATAA...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATAGGCAGGCATCGCACTaGAAGGGGGACCTCATGGTG +
Preference number: 5 (lower is better)
Translates to: FGLTTNHSSVFWEDFLIHRQASH*KGDLMV
Trigger: CACCATGAGGTCCCCCTTCAAGTGCGATGCCTGCCT...ATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTTCACAACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCAGGCAGGCATCGCACTaGAAGGGGGACCTCATGGTG +
Preference number: 5 (lower is better)
Translates to: FHNITVDSSKGHVFSFFIRQASH*KGDLMV
Trigger: CACCATGAGGTCCCCCTTCAAGTGCGATGCCTGCCT...GATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCGCTGTCCTCCAGACCTaGGGGGAAAAGGGAGCTTTT +
Preference number: 5 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFAVLQT*GEKGAF
Trigger: AAAAGCTCCCTTTTCCCCCAAGGTCTGGAGGACAGC...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAAAGAGACTTGCTCCTCTaGCTGTCCTCCAGACCTTGG +
Preference number: 5 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAERDLLL*LSSRPW
Trigger: CCAAGGTCTGGAGGACAGCAAGAGGAGCAAGTCTCT...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGCCCAATAACCAAGCGTaGGTCATCCCTGTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: TVDSSKGHVFSFFIQRCMPNNQA*VIPVGV
Trigger: CACTCCCACAGGGATGACCAACGCTTGGTTATTGGG...CATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGATACTAGGCATTTTCTaGTACACGCGTCTATTGCTG +
Preference number: 5 (lower is better)
Translates to: SRALLDIQHLPSRTLAITILGIF*YTRLLL
Trigger: CAGCAATAGACGCGTGTACAAGAAAATGCCTAGTAT...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTGGAACAGTTACCCTCCAGAACATaGGCCATTACGTATATTTCC +
Preference number: 5 (lower is better)
Translates to: ITCSEIYTSLWPRLSLEQLPSRT*AITYIS
Trigger: GGAAATATACGTAATGGCCAATGTTCTGGAGGGTAA...CTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGCTTAGCAGGGCACTATaGGACATCCAACATTTACCC +
Preference number: 5 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQLSRAL*DIQHLP
Trigger: GGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAAG...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTTGGGGTGACCTCACAAGATTCCTaGAGTGGAAGATTATGGCAT +
Preference number: 5 (lower is better)
Translates to: ITNTLICYSLGEPGVLGVTSQDS*SGRLWH
Trigger: ATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGT...CACCCCAAGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATCCAATGCATCATTATaGCCAACATACCCAGTAGGC +
Preference number: 5 (lower is better)
Translates to: EPNFLISCTCQSHYSADASNASL*PTYPVG
Trigger: GCCTACTGGGTATGTTGGCAATAATGATGCATTGGA...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AGTCATGGAGATTCAGATTTAGGATCAGATGTTGGGGTGACTATTCTGGGCCCTTCCAATGCATCATTATaGCCAACATACCCAGTAGGC +
Preference number: 5 (lower is better)
Translates to: SHGDSDLGSDVGVTILGPSNASL*PTYPVG
Trigger: GCCTACTGGGTATGTTGGCAATAATGATGCATTGGA...AGGGCCCAGAATAGTCACCCCAACATCTGATCCTAAATCTGAATCTCCATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCCACGAACACACTGATTaGCTATTCTTTAGGGGAGCC +
Preference number: 5 (lower is better)
Translates to: EAVCKRANNNNNKIPPYIHEHTD*LFFRGA
Trigger: GGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAGGCTCCAGATGTGTCTaGGAAATGAACTATAATGAA +
Preference number: 5 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQGSRCV*EMNYNE
Trigger: TTCATTATAGTTCATTTCCAAGACACATCTGGAGCC...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAAGGCAGACAGATGGCATaGTACTTCTTACAGATCACA +
Preference number: 5 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHEGRQMA*YFLQIT
Trigger: TGTGATCTGTAAGAAGTACAATGCCATCTGTCTGCC...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTGAAGGCTTTTGATTaGAGGAGTTTGGGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: EPNFLISCTCQSHYSADALKAFD*RSLGWK
Trigger: CTTCCACCCCAAACTCCTCAAATCAAAAGCCTTCAA...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTTGAAGGCTTTTGATTaGAGGAGTTTGGGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTLKAFD*RSLGWK
Trigger: CTTCCACCCCAAACTCCTCAAATCAAAAGCCTTCAA...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACAACTGTATCCACAGTTaGGAGGATACTCAGGGTAGA +
Preference number: 5 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHNCIHS*EDTQGR
Trigger: TCTACCCTGAGTATCCTCCAAACTGTGGATACAGTT...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGCTATTCCATGCATCCTaGAGCTTTAAGGGAATCATC +
Preference number: 5 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGLFHAS*SFKGII
Trigger: GATGATTCCCTTAAAGCTCAAGGATGCATGGAATAG...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTAAATGGAGGCGATCCTaGCTGGGGTGGATTAAGGTC +
Preference number: 5 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLKWRRS*LGWIKV
Trigger: GACCTTAATCCACCCCAGCAAGGATCGCCTCCATTT...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTAGAAAGCCTCTTTGGCTaGACGACAAATCACTCTTCT +
Preference number: 5 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVESLFG*TTNHSS
Trigger: AGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTC...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCAGAAAGCCTCTTTGGCTaGACGACAAATCACTCTTCT +
Preference number: 5 (lower is better)
Translates to: DVKEDKPKTMLAFGRQMAESLFG*TTNHSS
Trigger: AGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTC...TGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTGAAAGCCTCTTTGGCTaGACGACAAATCACTCTTCT +
Preference number: 5 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSESLFG*TTNHSS
Trigger: AGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTC...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCAGAAAGCCTCTTTGGCTaGACGACAAATCACTCTTCT +
Preference number: 5 (lower is better)
Translates to: EPNFLISCTCQSHYSADAESLFG*TTNHSS
Trigger: AGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTC...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AGCAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTTCACAACATTACTGTaGATTCTTCCAAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: SRALLDIQHLPSRTLAITFTTLL*ILPKAT
Trigger: CGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAA...CGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AGTCAGTCCAAGTATAACTCTCACTCTCCCTGGAGGTCTCTGTGGCATTTGGCATTTGTGTTCAGAAATTaGGGCTCCTTGACATCAACA +
Preference number: 5 (lower is better)
Translates to: SQSKYNSHSPWRSLWHLAFVFRN*GSLTST
Trigger: TGTTGATGTCAAGGAGCCCAAATTTCTGAACACAAA...TGCCAAATGCCACAGAGACCTCCAGGGAGAGTGAGAGTTATACTTGGACTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAAGGAGACCAGGCACTTaGAAAATATGTCTAACGTTA +
Preference number: 5 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQRRPGT*KICLTL
Trigger: TAACGTTAGACATATTTTCAAAGTGCCTGGTCTCCT...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATGGTTCCCTGGAGAGTaGCATGCTTTGAAATACAAC +
Preference number: 5 (lower is better)
Translates to: EPNFLISCTCQSHYSADAWFPGE*HALKYN
Trigger: GTTGTATTTCAAAGCATGCAACTCTCCAGGGAACCA...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATCAGGCAATGACCAGCTaGTGTATTATGCAACAAGTC +
Preference number: 5 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHQAMTS*CIMQQV
Trigger: GACTTGTTGCATAATACACAAGCTGGTCATTGCCTG...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp CACAGTTTGGAGGATACTCAGGGTAGATCCAAGAGTGCCTCGTGTTTTGAAGGCAATTCAATAACTTTCTaGCAGGCAATGACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: HSLEDTQGRSKSASCFEGNSITF*QAMTSL
Trigger: CAAGCTGGTCATTGCCTGCAAGAAAGTTATTGAATT...GCCTTCAAAACACGAGGCACTCTTGGATCTACCCTGAGTATCCTCCAAACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTGCTGGACTTGTGTCTTaGCATCCTCAAAGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: NPDLRKCHNIATILSGALAGLVS*HPQRKC
Trigger: ACACTTCCTTTGAGGATGCAAAGACACAAGTCCAGC...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACCCATCCCATGTAACATaGACCATAAATGGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: SYISVGAMKWFATNRENNPSHVT*TINGCK
Trigger: CTTGCACCCATTTATGGTCAATGTTACATGGGATGG...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATGTGAAGGATAAGTCTTaGCCATCCCATGTAACATTG +
Preference number: 5 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHVKDKS*PSHVTL
Trigger: CAATGTTACATGGGATGGCAAAGACTTATCCTTCAC...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTGTGAAGGATAAGTCTTaGCCATCCCATGTAACATTG +
Preference number: 5 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPVKDKS*PSHVTL
Trigger: CAATGTTACATGGGATGGCAAAGACTTATCCTTCAC...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCGTGAAGGATAAGTCTTaGCCATCCCATGTAACATTG +
Preference number: 5 (lower is better)
Translates to: SPLASNASLLPTYPVGMSVKDKS*PSHVTL
Trigger: CAATGTTACATGGGATGGCAAAGACTTATCCTTCAC...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCGTATGGTTCTCCCACTaGCCCACCTTTTCCCATTCC +
Preference number: 5 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFVWFSH*PTFSHS
Trigger: GGAATGGGAAAAGGTGGGCAAGTGGGAGAACCATAC...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTACGATGCTGAGATGGTaGTCATCCGGCTCACAGTCG +
Preference number: 5 (lower is better)
Translates to: MNYNEGSTVITNTLICYSTMLRW*SSGSQS
Trigger: CGACTGTGAGCCGGATGACAACCATCTCAGCATCGT...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACACGATGCTGAGATGGTaGTCATCCGGCTCACAGTCG +
Preference number: 5 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYTMLRW*SSGSQS
Trigger: CGACTGTGAGCCGGATGACAACCATCTCAGCATCGT...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCTCACAAACATTCATCCCCTCATaGGTTGAATTGTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: LVKDSPIWCLPCSAHTSQTFIPS*VELLIL
Trigger: CAAAATCAACAATTCAACCAATGAGGGGATGAATGT...TTGTGAGGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCAACATTGTTAACTTTCTaGCCATGCTTCCCATTGGTC +
Preference number: 5 (lower is better)
Translates to: EPNFLISCTCQSHYSADATLLTF*PCFPLV
Trigger: GACCAATGGGAAGCATGGCAAGAAAGTTAACAATGT...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCACATTGTTAACTTTCTaGCCATGCTTCCCATTGGTC +
Preference number: 5 (lower is better)
Translates to: SPLASNASLLPTYPVGMSTLLTF*PCFPLV
Trigger: GACCAATGGGAAGCATGGCAAGAAAGTTAACAATGT...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATTTGGCTAAGTTTCTGTaGTATCCAACAGGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHLAKFL*YPTGLK
Trigger: CTTCAGCCCTGTTGGATACAACAGAAACTTAGCCAA...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGGGGTGCTTTCCCTTaGGCTAAGTTTCTGTTGTAT +
Preference number: 5 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRWGAFP*AKFLLY
Trigger: ATACAACAGAAACTTAGCCAAAGGGAAAGCACCCCA...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGATGGGGTGCTTTCCCTTaGGCTAAGTTTCTGTTGTAT +
Preference number: 5 (lower is better)
Translates to: RRHKCVSLCSSEQDHRSRWGAFP*AKFLLY
Trigger: ATACAACAGAAACTTAGCCAAAGGGAAAGCACCCCA...TCGGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCTGGGATCCCGTCAGATaGAAGTCTGGAGACTTCTTC +
Preference number: 5 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFWDPVR*KSGDFF
Trigger: GAAGAAGTCTCCAGACTTCAATCTGACGGGATCCCA...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACTGGAGTTCGTTCATGTaGTCTCCAAAAATGCTCTCT +
Preference number: 5 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHWSSFM*SPKMLS
Trigger: AGAGAGCATTTTTGGAGACAACATGAACGAACTCCA...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTTATCCTTCTGCCGGTaGGCCACAAATGTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSLSFCR*ATNVWS
Trigger: ACTCCAAACATTTGTGGCCAACCGGCAGAAGGATAA...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATGAGAGTAAGAGGATGTaGTCCCTGGAATACATAGTT +
Preference number: 5 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHESKRM*SLEYIV
Trigger: AACTATGTATTCCAGGGACAACATCCTCTTACTCTC...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCTTAGGGTTGGACTCATaGAGAGTAAGAGGATGTTGT +
Preference number: 5 (lower is better)
Translates to: SPLASNASLLPTYPVGMSLGLDS*RVRGCC
Trigger: ACAACATCCTCTTACTCTCAATGAGTCCAACCCTAA...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AGCATAAGGCATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCTTAGGGTTGGACTCATaGAGAGTAAGAGGATGTTGT +
Preference number: 5 (lower is better)
Translates to: SIRHNMLRNIHIIVAPTVLGLDS*RVRGCC
Trigger: ACAACATCCTCTTACTCTCAATGAGTCCAACCCTAA...GACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTGGTCTAGAGTTCGCTTaGGATTCTGTGCTCACGGCC +
Preference number: 5 (lower is better)
Translates to: MNYNEGSTVITNTLICYSGLEFA*DSVLTA
Trigger: GGCCGTGAGCACAGAATCCAAAGCGAACTCTAGACC...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCAAAGTTGTCCTTGGTTTaGTGGTTCTTACTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SAMLSTHLTRFLEWKIMAKLSLV*WFLLLS
Trigger: TGACAACAGTAAGAACCACAAAACCAAGGACAACTT...TGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAAACCTCACTACAGTCCTaGGGGTATTTGGAGGCCACT +
Preference number: 5 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAETSLQS*GYLEAT
Trigger: AGTGGCCTCCAAATACCCCAAGGACTGTAGTGAGGT...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGAGACTTGCTCCTCTaGCTGTCCTCCAGACCTTGG +
Preference number: 5 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWRDLLL*LSSRPW
Trigger: CCAAGGTCTGGAGGACAGCAAGAGGAGCAAGTCTCT...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTCCCAATAACCAAGCGTaGGTCATCCCTGTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: MNYNEGSTVITNTLICYSPNNQA*VIPVGV
Trigger: CACTCCCACAGGGATGACCAACGCTTGGTTATTGGG...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAGAAATATACACATCATaGTGGCCCCGACTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSEIYTS*WPRLSL
Trigger: CAGGGACAGTCGGGGCCACAATGATGTGTATATTTC...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCGAAATATACACATCATaGTGGCCCCGACTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: SILGIFLYTRLLLQEFKTEIYTS*WPRLSL
Trigger: CAGGGACAGTCGGGGCCACAATGATGTGTATATTTC...GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACTTGTACACGCGTCTATaGCTGCAGGAATTTAAAACC +
Preference number: 5 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHLYTRL*LQEFKT
Trigger: GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGTTATGGTATACTAGGCATTTTCTaGTACACGCGTCTATTGCTG +
Preference number: 5 (lower is better)
Translates to: YTANWTPPWLFGNGTSYGILGIF*YTRLLL
Trigger: CAGCAATAGACGCGTGTACAAGAAAATGCCTAGTAT...ACCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGATGGCATTACCCTCCAGAACATaGGCCATTACGTATATTTCC +
Preference number: 5 (lower is better)
Translates to: DVKEDKPKTMLAFGRQMALPSRT*AITYIS
Trigger: GGAAATATACGTAATGGCCAATGTTCTGGAGGGTAA...TGCCATCTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTCTTAGCAGGGCACTATaGGACATCCAACATTTACCC +
Preference number: 5 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSLSRAL*DIQHLP
Trigger: GGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAAG...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACCTCACAAGATTCCTaGAGTGGAAGATTATGGCAT +
Preference number: 5 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPTSQDS*SGRLWH
Trigger: ATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGT...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATTCCAATGCATCATTATaGCCAACATACCCAGTAGGC +
Preference number: 5 (lower is better)
Translates to: RALLDIQHLPSRTLAITYSNASL*PTYPVG
Trigger: GCCTACTGGGTATGTTGGCAATAATGATGCATTGGA...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCCACCACCATGGCTGTTaGGAAACGGAACGAGTTATG +
Preference number: 5 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFHHHGC*ETERVM
Trigger: CATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTG...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCAGACAGTTGAAGGCTTTTGATTaGAGGAGTTTGGGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: FLDVKEDKPKTMLAFGRQLKAFD*RSLGWK
Trigger: CTTCCACCCCAAACTCCTCAAATCAAAAGCCTTCAA...CTGTCTGCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATAGAGTGCCTCGTGTTTaGAAGGCTTTTGATTTGAGG +
Preference number: 5 (lower is better)
Translates to: RALLDIQHLPSRTLAITYRVPRV*KAFDLR
Trigger: CCTCAAATCAAAAGCCTTCAAAACACGAGGCACTCT...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGCATATATGCACAGGTTaGAGGAGAATAAGAATGGGA +
Preference number: 5 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGHICTG*RRIRMG
Trigger: TCCCATTCTTATTCTCCTCAAACCTGTGCATATATG...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAAAAATGGAGGCGATCCTaGCTGGGGTGGATTAAGGTC +
Preference number: 5 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAEKWRRS*LGWIKV
Trigger: GACCTTAATCCACCCCAGCAAGGATCGCCTCCATTT...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACCATCTGAAACTCAGGCATTaGTGTTCAGAAATTTGGGCT +
Preference number: 5 (lower is better)
Translates to: HHINNSGKSDTQLIGHHHLKLRH*CSEIWA
Trigger: AGCCCAAATTTCTGAACACAAATGCCTGAGTTTCAG...ATGGTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp CAGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTAGAATCGAGCCAGAAATaGAACCATGTCTTGGATCTA +
Preference number: 5 (lower is better)
Translates to: QGTIGHPTFTLQNIGHYVESSQK*NHVLDL
Trigger: TAGATCCAAGACATGGTTCAATTTCTGGCTCGATTC...TACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp TTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCCGGAGAAAGGCAGCTGTGGTATaGGCTATGAGTTATGTTAAT +
Preference number: 5 (lower is better)
Translates to: LASNASLLPTYPVGMSRRKAAVV*AMSYVN
Trigger: ATTAACATAACTCATAGCCAATACCACAGCTGCCTT...TCTCCGGGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp ACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCGTAGACGTCGGATCCTaGTTTGGGGACACCTTTTTA +
Preference number: 5 (lower is better)
Translates to: TEFLDVKEDKPKTMLAFGVDVGS*FGDTFL
Trigger: TAAAAAGGTGTCCCCAAACAAGGATCCGACGTCTAC...GCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674742.1
CDS-3UTR CAA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTGCTGGACTTGTGTCTTaGCATCCTCAAAGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: ALLDIQHLPSRTLAITYIAGLVS*HPQRKC
Trigger: ACACTTCCTTTGAGGATGCAAAGACACAAGTCCAGC...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCCTTCTTCAGCTGGACTaGTGTCTTTGCATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: TEFLDVKEDKPKTMLAFGLLQLD*CLCILK
Trigger: TTTGAGGATGCAAAGACACAAGTCCAGCTGAAGAAG...GCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTCCATCCCATGTAACATaGACCATAAATGGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSPSHVT*TINGCK
Trigger: CTTGCACCCATTTATGGTCAATGTTACATGGGATGG...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTCCATCCCATGTAACATaGACCATAAATGGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: NPDLRKCHNIATILSGALPSHVT*TINGCK
Trigger: CTTGCACCCATTTATGGTCAATGTTACATGGGATGG...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCGTGAAGGATAAGTCTTaGCCATCCCATGTAACATTG +
Preference number: 5 (lower is better)
Translates to: EAVCKRANNNNNKIPPYIVKDKS*PSHVTL
Trigger: CAATGTTACATGGGATGGCAAAGACTTATCCTTCAC...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GGAAGATTTTTAAACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTTCCCATTCCCGGTCTTaGTTCAGCACAATCACCACC +
Preference number: 5 (lower is better)
Translates to: GRFLNIRFDTRHFLVHASSHSRS*FSTITT
Trigger: GGTGGTGATTGTGCTGAACAAAGACCGGGAATGGGA...AGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTTTAAAAATCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp CACAGTCATCACGAACACACTGATTTGCTATTCTTTAGGGGAGCCTGGAGTTCTCCCTCATTGGTTGAATaGTTGATTTTGACGAACTTC +
Preference number: 5 (lower is better)
Translates to: HSHHEHTDLLFFRGAWSSPSLVE*LILTNF
Trigger: GAAGTTCGTCAAAATCAACAATTCAACCAATGAGGG...AGAACTCCAGGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTGATGACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCACATTGTTAACTTTCTaGCCATGCTTCCCATTGGTC +
Preference number: 5 (lower is better)
Translates to: EAVCKRANNNNNKIPPYITLLTF*PCFPLV
Trigger: GACCAATGGGAAGCATGGCAAGAAAGTTAACAATGT...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACTGCCATGACTGCCCGTaGATAGACCACTTCACCGAT +
Preference number: 5 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYCHDCP*IDHFTD
Trigger: ATCGGTGAAGTGGTCTATCAACGGGCAGTCATGGCA...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATATTATTCTTATTTGCATGCCATGACTGCCCGTaGATAGACCACTTCACCGAT +
Preference number: 5 (lower is better)
Translates to: LLQEFKTLGVEYILFLFACHDCP*IDHFTD
Trigger: ATCGGTGAAGTGGTCTATCAACGGGCAGTCATGGCA...TGCAAATAAGAATAATATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTTGGGGTGCTTTCCCTTaGGCTAAGTTTCTGTTGTAT +
Preference number: 5 (lower is better)
Translates to: NPDLRKCHNIATILSGALWGAFP*AKFLLY
Trigger: ATACAACAGAAACTTAGCCAAAGGGAAAGCACCCCA...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAACAGATACCATGATCTaGCTGGTGGTCCCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSTDTMI*LVVPLG
Trigger: TCCTAAAGGGACCACCAGCAAGATCATGGTATCTGT...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGACTGAGGCCGGTCACTaGGTCCACAAATTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWTEAGH*VHKFLL
Trigger: CAAGAGGAATTTGTGGACCAAGTGACCGGCCTCAGT...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATATTATTCTTATTTGCAACTGAGGCCGGTCACTaGGTCCACAAATTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: LLQEFKTLGVEYILFLFATEAGH*VHKFLL
Trigger: CAAGAGGAATTTGTGGACCAAGTGACCGGCCTCAGT...TGCAAATAAGAATAATATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACTTGAGGAGTTCATGTaGGACATGCTGGAAATGTTT +
Preference number: 5 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQLEEFM*DMLEMF
Trigger: AAACATTTCCAGCATGTCCAACATGAACTCCTCAAG...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCCTTGAGGAGTTCATGTaGGACATGCTGGAAATGTTT +
Preference number: 5 (lower is better)
Translates to: EAVCKRANNNNNKIPPYILEEFM*DMLEMF
Trigger: AAACATTTCCAGCATGTCCAACATGAACTCCTCAAG...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTAAGTCAGCAGCTCTTTaGGGTGAGTCCATTCTTGAG +
Preference number: 5 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLKSAAL*GESILE
Trigger: CTCAAGAATGGACTCACCCAAAAGAGCTGCTGACTT...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAAAGTCAGCAGCTCTTTaGGGTGAGTCCATTCTTGAG +
Preference number: 5 (lower is better)
Translates to: RANNNNNKIPPYIFFLLAKSAAL*GESILE
Trigger: CTCAAGAATGGACTCACCCAAAAGAGCTGCTGACTT...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCGATGAGGGAACCTCTTaGGATGAAGTCAGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: TIGHPTFTLQNIGHYVYFDEGTS*DEVSSS
Trigger: AGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCATC...GAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAAGATGAGGGAACCTCTTaGGATGAAGTCAGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAEDEGTS*DEVSSS
Trigger: AGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCATC...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATTGGAGTTCGTTCATGTaGTCTCCAAAAATGCTCTCT +
Preference number: 5 (lower is better)
Translates to: RALLDIQHLPSRTLAITYWSSFM*SPKMLS
Trigger: AGAGAGCATTTTTGGAGACAACATGAACGAACTCCA...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCTGGAGTTCGTTCATGTaGTCTCCAAAAATGCTCTCT +
Preference number: 5 (lower is better)
Translates to: QQNTSLHLLPLSRALLDIWSSFM*SPKMLS
Trigger: AGAGAGCATTTTTGGAGACAACATGAACGAACTCCA...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTGTTGGCCACAAATGTTaGGAGTTCGTTCATGTTGTC +
Preference number: 5 (lower is better)
Translates to: NPDLRKCHNIATILSGALVGHKC*EFVHVV
Trigger: GACAACATGAACGAACTCCAAACATTTGTGGCCAAC...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACTTATCCTTCTGCCGGTaGGCCACAAATGTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYLSFCR*ATNVWS
Trigger: ACTCCAAACATTTGTGGCCAACCGGCAGAAGGATAA...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATGAGAGTAAGAGGATGTaGTCCCTGGAATACATAGTT +
Preference number: 5 (lower is better)
Translates to: RALLDIQHLPSRTLAITYESKRM*SLEYIV
Trigger: AACTATGTATTCCAGGGACAACATCCTCTTACTCTC...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACATTTAGGGTTGGACTCATaGAGAGTAAGAGGATGTTGT +
Preference number: 5 (lower is better)
Translates to: NTSLHLLPLSRALLDIQHLGLDS*RVRGCC
Trigger: ACAACATCCTCTTACTCTCAATGAGTCCAACCCTAA...ATGTTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCTTAGGGTTGGACTCATaGAGAGTAAGAGGATGTTGT +
Preference number: 5 (lower is better)
Translates to: QQNTSLHLLPLSRALLDILGLDS*RVRGCC
Trigger: ACAACATCCTCTTACTCTCAATGAGTCCAACCCTAA...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTCCTATTCTCTGCTGTaGCCTCATCCCTCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVSYSLL*PHPSGR
Trigger: TCTCCCAGAGGGATGAGGCAACAGCAGAGAATAGGA...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTGGCACGTGGCCCGATTaGACGTTTCTGAAATGTCAG +
Preference number: 5 (lower is better)
Translates to: MNYNEGSTVITNTLICYSGTWPD*TFLKCQ
Trigger: CTGACATTTCAGAAACGTCAAATCGGGCCACGTGCC...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TACACAGCTAATTGGACACCACCATGGCTGTTTGGAAACGGAACGAGTTATGGTAAGTTGTCCTTGGTTTaGTGGTTCTTACTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: YTANWTPPWLFGNGTSYGKLSLV*WFLLLS
Trigger: TGACAACAGTAAGAACCACAAAACCAAGGACAACTT...ACCATAACTCGTTCCGTTTCCAAACAGCCATGGTGGTGTCCAATTAGCTGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ATAAGGCATAACATGCTCCGAAATATACACATCATTGTGGCCCCGACTGTCCCTAAGTTGTCCTTGGTTTaGTGGTTCTTACTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: IRHNMLRNIHIIVAPTVPKLSLV*WFLLLS
Trigger: TGACAACAGTAAGAACCACAAAACCAAGGACAACTT...AGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp TGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTTATACTGGTCGTTGTaGGAAAGCCCCTCTTCATTA +
Preference number: 5 (lower is better)
Translates to: CTSYRSQYTYGCWCMSPHLYWSL*ESPSSL
Trigger: TAATGAAGAGGGGCTTTCCAACAACGACCAGTATAA...ATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AATGACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGCTGTGCGGGGAACCCTaGTCTTTCAAGGTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: NDKYFEEFFLHLCWCYEVLCGEP*SFKVKC
Trigger: GCACTTCACCTTGAAAGACAAGGGTTCCCCGCACAG...CACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGAAGATTTTTAAACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTAACAGTACGATGCCGTaGACCTCAAGGACGACCGAA +
Preference number: 5 (lower is better)
Translates to: GRFLNIRFDTRHFLVHASNSTMP*TSRTTE
Trigger: TTCGGTCGTCCTTGAGGTCAACGGCATCGTACTGTT...AGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTTTAAAAATCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp CGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGATTACCCTCCAGAACATaGGCCATTACGTATATTTCC +
Preference number: 5 (lower is better)
Translates to: RRHKCVSLCSSEQDHRSRLPSRT*AITYIS
Trigger: GGAAATATACGTAATGGCCAATGTTCTGGAGGGTAA...TCGGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTTACCCTCCAGAACATaGGCCATTACGTATATTTCC +
Preference number: 5 (lower is better)
Translates to: CTSYRSQYTYGCWCMSPHLPSRT*AITYIS
Trigger: GGAAATATACGTAATGGCCAATGTTCTGGAGGGTAA...ATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAATTACCCTCCAGAACATaGGCCATTACGTATATTTCC +
Preference number: 5 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQLPSRT*AITYIS
Trigger: GGAAATATACGTAATGGCCAATGTTCTGGAGGGTAA...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTCTTAGCAGGGCACTATaGGACATCCAACATTTACCC +
Preference number: 5 (lower is better)
Translates to: ALLDIQHLPSRTLAITYILSRAL*DIQHLP
Trigger: GGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAAG...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATACCTCACAAGATTCCTaGAGTGGAAGATTATGGCAT +
Preference number: 5 (lower is better)
Translates to: RALLDIQHLPSRTLAITYTSQDS*SGRLWH
Trigger: ATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGT...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GTGTCTGCCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGATCATAACATCACCATaGGCATCCAATGCATCATTA +
Preference number: 5 (lower is better)
Translates to: VSAMLSTHLTRFLEWKIMIITSP*ASNASL
Trigger: TAATGATGCATTGGATGCCAATGGTGATGTTATGAT...CATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGGCAGACAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTATTTTTGGTTAAGGACTCACCTATCTGGTGTCTGCCATGCTCAGCACACACCAAACTTCCTAATCTCTaGCACATGTCAATCGCACTA +
Preference number: 5 (lower is better)
Translates to: LFLVKDSPIWCLPCSAHTKLPNL*HMSIAL
Trigger: TAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTT...GGTGTGTGCTGAGCATGGCAGACACCAGATAGGTGAGTCCTTAACCAAAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTGCCCACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGCACGAACACACTGATTaGCTATTCTTTAGGGGAGCC +
Preference number: 5 (lower is better)
Translates to: LPTCKKIILTKQNAHHEEHEHTD*LFFRGA
Trigger: GGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG...CTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGTGGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAAGGCTCCAGATGTGTCTaGGAAATGAACTATAATGAA +
Preference number: 5 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHEGSRCV*EMNYNE
Trigger: TTCATTATAGTTCATTTCCAAGACACATCTGGAGCC...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACAAACTGTATCCACAGTTaGGAGGATACTCAGGGTAGA +
Preference number: 5 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTNCIHS*EDTQGR
Trigger: TCTACCCTGAGTATCCTCCAAACTGTGGATACAGTT...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCACATATATGCACAGGTTaGAGGAGAATAAGAATGGGA +
Preference number: 5 (lower is better)
Translates to: EPNFLISCTCQSHYSADAHICTG*RRIRMG
Trigger: TCCCATTCTTATTCTCCTCAAACCTGTGCATATATG...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCTATTCCATGCATCCTaGAGCTTTAAGGGAATCATC +
Preference number: 5 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLLFHAS*SFKGII
Trigger: GATGATTCCCTTAAAGCTCAAGGATGCATGGAATAG...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTACGAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATTCACAACATTACTGTaGATTCTTCCAAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: LRAKLPNLLHMSIALQCRFTTLL*ILPKAT
Trigger: CGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAA...TCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCAGAGACCCAACCGTTaGCATTCAAGTGTACCTATC +
Preference number: 5 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYQRPNR*HSSVPI
Trigger: GATAGGTACACTTGAATGCAAACGGTTGGGTCTCTG...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAAAAATTGAACCATGTCTaGGATCTAATCCTCGCTCTG +
Preference number: 5 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQKLNHV*DLILAL
Trigger: CAGAGCGAGGATTAGATCCAAGACATGGTTCAATTT...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp GATTATGGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTGTTTAGTCTCTGTTaGCATTGCATGGGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: DYGMKPCAKEPTTTTTKYLFSLC*HCMGPW
Trigger: CCAAGGACCCATGCAATGCAAACAGAGACTAAACAG...GTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCCATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCAAGGAGACCAGGCACTTaGAAAATATGTCTAACGTTA +
Preference number: 5 (lower is better)
Translates to: EPNFLISCTCQSHYSADARRPGT*KICLTL
Trigger: TAACGTTAGACATATTTTCAAAGTGCCTGGTCTCCT...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGGAATTAGCCCTGATGTaGACTGATAAAAAGATGAGA +
Preference number: 5 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGELALM*TDKKMR
Trigger: TCTCATCTTTTTATCAGTCAACATCAGGGCTAATTC...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp ATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAGGCGATCCTTGCTGGGGGAGGAATAGTCAACTaGCAAATAATATCACCTCTT +
Preference number: 5 (lower is better)
Translates to: IHVKTSQTHEEMEAILAGGGIVN*QIISPL
Trigger: AAGAGGTGATATTATTTGCAAGTTGACTATTCCTCC...CCCAGCAAGGATCGCCTCCATTTCCTCATGAGTCTGGGATGTTTTGACATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp GAGCCAAACTTCCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCAGTGATAATCTCAGTTTaGTCTTCTTCGTTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: EPNFLISCTCQSHYSADAVIISV*SSSFLQ
Trigger: CTGCAGAAACGAAGAAGACAAAACTGAGATTATCAC...TGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAAAAGGCAGCTGTGGTATaGGCTATGAGTTATGTTAAT +
Preference number: 5 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHEKAAVV*AMSYVN
Trigger: ATTAACATAACTCATAGCCAATACCACAGCTGCCTT...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACAATTCAATAACTTTCTaGCAGGCAATGACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHNSITF*QAMTSL
Trigger: CAAGCTGGTCATTGCCTGCAAGAAAGTTATTGAATT...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp TCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCTTCTTCAGCTGGACTaGTGTCTTTGCATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: SILGIFLYTRLLLQEFKTLLQLD*CLCILK
Trigger: TTTGAGGATGCAAAGACACAAGTCCAGCTGAAGAAG...GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp TCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGAATTTAAAACCCCATCCCATGTAACATaGACCATAAATGGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: SILGIFLYTRLLLQEFKTPSHVT*TINGCK
Trigger: CTTGCACCCATTTATGGTCAATGTTACATGGGATGG...GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCATCCCATGTAACATaGACCATAAATGGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLPSHVT*TINGCK
Trigger: CTTGCACCCATTTATGGTCAATGTTACATGGGATGG...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTGTTGAATTGTTGATTTaGACGAACTTCCGACATGGC +
Preference number: 5 (lower is better)
Translates to: NPDLRKCHNIATILSGALVELLI*TNFRHG
Trigger: GCCATGTCGGAAGTTCGTCAAAATCAACAATTCAAC...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TGTCACCACATTAACAACTCTGGGAAGAGCGATACACAGCTAATTGGACACCACTCATTGGTTGAATTGTaGATTTTGACGAACTTCCGA +
Preference number: 5 (lower is better)
Translates to: CHHINNSGKSDTQLIGHHSLVEL*ILTNFR
Trigger: TCGGAAGTTCGTCAAAATCAACAATTCAACCAATGA...GTGGTGTCCAATTAGCTGTGTATCGCTCTTCCCAGAGTTGTTAATGTGGTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CCATGCTCAGCACACACCTCACAAGATTCCTTGAGTGGAAGATTATGGCATGAATCATTGGTTGAATTGTaGATTTTGACGAACTTCCGA +
Preference number: 5 (lower is better)
Translates to: PCSAHTSQDSLSGRLWHESLVEL*ILTNFR
Trigger: TCGGAAGTTCGTCAAAATCAACAATTCAACCAATGA...TTCATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GGCATGAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTTCATTGGTTGAATTGTaGATTTTGACGAACTTCCGA +
Preference number: 5 (lower is better)
Translates to: GMKPCAKEPTTTTTKYLPSLVEL*ILTNFR
Trigger: TCGGAAGTTCGTCAAAATCAACAATTCAACCAATGA...AGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTCATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAACCCTCATTGGTTGAATaGTTGATTTTGACGAACTTC +
Preference number: 5 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQPSLVE*LILTNF
Trigger: GAAGTTCGTCAAAATCAACAATTCAACCAATGAGGG...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TCACCATTGGCATCCAATGCATCATTATTGCCAACATACCCAGTAGGCATGTCCACATTCATCCCCTCATaGGTTGAATTGTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: SPLASNASLLPTYPVGMSTFIPS*VELLIL
Trigger: CAAAATCAACAATTCAACCAATGAGGGGATGAATGT...GGACATGCCTACTGGGTATGTTGGCAATAATGATGCATTGGATGCCAATGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTACATTGTTAACTTTCTaGCCATGCTTCCCATTGGTC +
Preference number: 5 (lower is better)
Translates to: PNLLHMSIALQCRCILNCTLLTF*PCFPLV
Trigger: GACCAATGGGAAGCATGGCAAGAAAGTTAACAATGT...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACTCAGAACGTTCCTCATaGATGGTGAGCGAGCCAACT +
Preference number: 5 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYSERSS*MVSEPT
Trigger: AGTTGGCTCGCTCACCATCAATGAGGAACGTTCTGA...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCATTGGCTAAGTTTCTGTaGTATCCAACAGGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSLAKFL*YPTGLK
Trigger: CTTCAGCCCTGTTGGATACAACAGAAACTTAGCCAA...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTTGGCTAAGTTTCTGTaGTATCCAACAGGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: ALLDIQHLPSRTLAITYILAKFL*YPTGLK
Trigger: CTTCAGCCCTGTTGGATACAACAGAAACTTAGCCAA...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAAACAGATACCATGATCTaGCTGGTGGTCCCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAETDTMI*LVVPLG
Trigger: TCCTAAAGGGACCACCAGCAAGATCATGGTATCTGT...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATATTATTCTTATTTGCATGGGATCCCGTCAGATaGAAGTCTGGAGACTTCTTC +
Preference number: 5 (lower is better)
Translates to: LLQEFKTLGVEYILFLFAWDPVR*KSGDFF
Trigger: GAAGAAGTCTCCAGACTTCAATCTGACGGGATCCCA...TGCAAATAAGAATAATATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTCTTGAGGAGTTCATGTaGGACATGCTGGAAATGTTT +
Preference number: 5 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSLEEFM*DMLEMF
Trigger: AAACATTTCCAGCATGTCCAACATGAACTCCTCAAG...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCGATGAGGGAACCTCTTaGGATGAAGTCAGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFDEGTS*DEVSSS
Trigger: AGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCATC...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATTGGAGTTCGTTCATGTaGTCTCCAAAAATGCTCTCT +
Preference number: 5 (lower is better)
Translates to: FSYISVGAMKWFATNRENWSSFM*SPKMLS
Trigger: AGAGAGCATTTTTGGAGACAACATGAACGAACTCCA...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTGGAGTTCGTTCATGTaGTCTCCAAAAATGCTCTCT +
Preference number: 5 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLWSSFM*SPKMLS
Trigger: AGAGAGCATTTTTGGAGACAACATGAACGAACTCCA...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCGGCGAGAGTAAGAGGATGTaGTCCCTGGAATACATAGTT +
Preference number: 5 (lower is better)
Translates to: TEFLDVKEDKPKTMLAFGESKRM*SLEYIV
Trigger: AACTATGTATTCCAGGGACAACATCCTCTTACTCTC...GCCGAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAAGTTTATACTGGTCGTaGTTGGAAAGCCCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: RANNNNNKIPPYIFFLLASLYWS*LESPSS
Trigger: TGAAGAGGGGCTTTCCAACAACGACCAGTATAAACT...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTATACTAGGCATTTTCTaGTACACGCGTCTATTGCTG +
Preference number: 5 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSILGIF*YTRLLL
Trigger: CAGCAATAGACGCGTGTACAAGAAAATGCCTAGTAT...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACATTACCCTCCAGAACATaGGCCATTACGTATATTTCC +
Preference number: 5 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTLPSRT*AITYIS
Trigger: GGAAATATACGTAATGGCCAATGTTCTGGAGGGTAA...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTACCTCACAAGATTCCTaGAGTGGAAGATTATGGCAT +
Preference number: 5 (lower is better)
Translates to: NPDLRKCHNIATILSGALTSQDS*SGRLWH
Trigger: ATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGT...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCATCCAATGCATCATTATaGCCAACATACCCAGTAGGC +
Preference number: 5 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSSNASL*PTYPVG
Trigger: GCCTACTGGGTATGTTGGCAATAATGATGCATTGGA...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCAAACTTCCTAATCTCTaGCACATGTCAATCGCACTA +
Preference number: 5 (lower is better)
Translates to: QQNTSLHLLPLSRALLDIKLPNL*HMSIAL
Trigger: TAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTT...GATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATAACGGCTCCAGATGTGTCTaGGAAATGAACTATAATGAA +
Preference number: 5 (lower is better)
Translates to: SYISVGAMKWFATNRENNGSRCV*EMNYNE
Trigger: TTCATTATAGTTCATTTCCAAGACACATCTGGAGCC...GTTATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATGGCTCCAGATGTGTCTaGGAAATGAACTATAATGAA +
Preference number: 5 (lower is better)
Translates to: RALLDIQHLPSRTLAITYGSRCV*EMNYNE
Trigger: TTCATTATAGTTCATTTCCAAGACACATCTGGAGCC...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTGCCCACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGGGCAGACAGATGGCATaGTACTTCTTACAGATCACA +
Preference number: 5 (lower is better)
Translates to: LPTCKKIILTKQNAHHEEGRQMA*YFLQIT
Trigger: TGTGATCTGTAAGAAGTACAATGCCATCTGTCTGCC...CTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGTGGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGTTCACAACATTACTGTaGATTCTTCCAAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: PPTERITQKGEIACLTKLFTTLL*ILPKAT
Trigger: CGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAA...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CAAAATACCTCCCTACATCTTCTTCCTCTTAGCAGGGCACTATTGGACATCCAATTTGTGTTCAGAAATTaGGGCTCCTTGACATCAACA +
Preference number: 5 (lower is better)
Translates to: QNTSLHLLPLSRALLDIQFVFRN*GSLTST
Trigger: TGTTGATGTCAAGGAGCCCAAATTTCTGAACACAAA...TTGGATGTCCAATAGTGCCCTGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp AGAAAGCCTCTTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTGTGTACACAAGCAGTaGTATTCACAGGATAAGTGC +
Preference number: 5 (lower is better)
Translates to: RKPLWLDDKSLFCILGRLCVHKQ*YSQDKC
Trigger: GCACTTATCCTGTGAATACAACTGCTTGTGTACACA...AAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAAGAGGCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp TTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATTAACAGAATCGAGCCAGAAATaGAACCATGTCTTGGATCTA +
Preference number: 5 (lower is better)
Translates to: FLQITVHIRLLVHVTTLTESSQK*NHVLDL
Trigger: TAGATCCAAGACATGGTTCAATTTCTGGCTCGATTC...TGTTAATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp CCTAATCTCTTGCACATGTCAATCGCACTACAGTGCAGATGCATTCTTAACTGTGCATTGCATGGGTCCTaGGTTATCCTTTGTATTAGA +
Preference number: 5 (lower is better)
Translates to: PNLLHMSIALQCRCILNCALHGS*VILCIR
Trigger: TCTAATACAAAGGATAACCAAGGACCCATGCAATGC...ACAGTTAAGAATGCATCTGCACTGTAGTGCGATTGACATGTGCAAGAGATTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATGTGATAATCTCAGTTTaGTCTTCTTCGTTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: RALLDIQHLPSRTLAITYVIISV*SSSFLQ
Trigger: CTGCAGAAACGAAGAAGACAAAACTGAGATTATCAC...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGGTAGACGTCGGATCCTaGTCAGCCATGATCATAGAT +
Preference number: 5 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWVDVGS*SAMIID
Trigger: ATCTATGATCATGGCTGACAAGGATCCGACGTCTAC...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp AGTCCCGTAAGTAAACACATAACATTCTGCATTTTCAGTGCGTATTTCCAACAAGCTGGACTTGTGTCTTaGCATCCTCAAAGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: SPVSKHITFCIFSAYFQQAGLVS*HPQRKC
Trigger: ACACTTCCTTTGAGGATGCAAAGACACAAGTCCAGC...TTGTTGGAAATACGCACTGAAAATGCAGAATGTTATGTGTTTACTTACGGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR CAA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAACTTCTTCAGCTGGACTaGTGTCTTTGCATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAELLQLD*CLCILK
Trigger: TTTGAGGATGCAAAGACACAAGTCCAGCTGAAGAAG...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GAAGCCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTCATTGGTTGAATTGTaGATTTTGACGAACTTCCGA +
Preference number: 5 (lower is better)
Translates to: EAVCKRANNNNNKIPPYISLVEL*ILTNFR
Trigger: TCGGAAGTTCGTCAAAATCAACAATTCAACCAATGA...GATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AACATCAGATTCGATACTAGGCATTTTCTTGTACACGCGTCTATTGCTGCAGGACCCTCATTGGTTGAATaGTTGATTTTGACGAACTTC +
Preference number: 5 (lower is better)
Translates to: NIRFDTRHFLVHASIAAGPSLVE*LILTNF
Trigger: GAAGTTCGTCAAAATCAACAATTCAACCAATGAGGG...TCCTGCAGCAATAGACGCGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCAACATTGTTAACTTTCTaGCCATGCTTCCCATTGGTC +
Preference number: 5 (lower is better)
Translates to: RANNNNNKIPPYIFFLLATLLTF*PCFPLV
Trigger: GACCAATGGGAAGCATGGCAAGAAAGTTAACAATGT...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GGTAGAGTACATATTATTCTTATTTGCAGCATAAGGCATAACATGCTCCGAAATTCAGAACGTTCCTCATaGATGGTGAGCGAGCCAACT +
Preference number: 5 (lower is better)
Translates to: GRVHIILICSIRHNMLRNSERSS*MVSEPT
Trigger: AGTTGGCTCGCTCACCATCAATGAGGAACGTTCTGA...ATTTCGGAGCATGTTATGCCTTATGCTGCAAATAAGAATAATATGTACTCTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp ACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTTCCCTATAGATTGGCTAAGTTTCTGTaGTATCCAACAGGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: TSNIYPPEHWPLRIFPYRLAKFL*YPTGLK
Trigger: CTTCAGCCCTGTTGGATACAACAGAAACTTAGCCAA...TCTATAGGGAAATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAATTGGCTAAGTTTCTGTaGTATCCAACAGGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAELAKFL*YPTGLK
Trigger: CTTCAGCCCTGTTGGATACAACAGAAACTTAGCCAA...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATAAGGAGTTTTAACATGTaGCTCTGGGATCCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGIRSFNM*LWDPVR
Trigger: TCTGACGGGATCCCAGAGCAACATGTTAAAACTCCT...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAAATGCTGGAAATGTTTTaGGCTGACCGGAGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAEMLEMF*ADRRSF
Trigger: AAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCAT...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTGCTGCAGGAATTTAAAACCCTGGGGGTAGAGTACATATTATTCTTATTTGCATGGGTGAGTCCATTCTaGAGGAGTTCATGTTGGACA +
Preference number: 5 (lower is better)
Translates to: LLQEFKTLGVEYILFLFAWVSPF*RSSCWT
Trigger: TGTCCAACATGAACTCCTCAAGAATGGACTCACCCA...TGCAAATAAGAATAATATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATATTATCCTTCTGCCGGTaGGCCACAAATGTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGILSFCR*ATNVWS
Trigger: ACTCCAAACATTTGTGGCCAACCGGCAGAAGGATAA...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACTCCACCGTGTTAGGGTaGGACTCATTGAGAGTAAGA +
Preference number: 5 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYSTVLG*DSLRVR
Trigger: TCTTACTCTCAATGAGTCCAACCCTAACACGGTGGA...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTTCCACCGTGTTAGGGTaGGACTCATTGAGAGTAAGA +
Preference number: 5 (lower is better)
Translates to: MNYNEGSTVITNTLICYSSTVLG*DSLRVR
Trigger: TCTTACTCTCAATGAGTCCAACCCTAACACGGTGGA...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTCCTCTTAGCATTATACTGGTCGTTGTaGGAAAGCCCCTCTTCATTA +
Preference number: 5 (lower is better)
Translates to: RANNNNNKIPPYIFFLLALYWSL*ESPSSL
Trigger: TAATGAAGAGGGGCTTTCCAACAACGACCAGTATAA...TGCTAAGAGGAAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTTCACAACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCGAAATATACACATCATaGTGGCCCCGACTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: FHNITVDSSKGHVFSFFIEIYTS*WPRLSL
Trigger: CAGGGACAGTCGGGGCCACAATGATGTGTATATTTC...GATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTTTTGTACACGCGTCTATaGCTGCAGGAATTTAAAACC +
Preference number: 5 (lower is better)
Translates to: RVQKSQQQQQQNTSLHLLLYTRL*LQEFKT
Trigger: GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA...AAGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTACTTAGCAGGGCACTATaGGACATCCAACATTTACCC +
Preference number: 5 (lower is better)
Translates to: LLLILPKATFSVSLSRDVLSRAL*DIQHLP
Trigger: GGGTAAATGTTGGATGTCCAATAGTGCCCTGCTAAG...TACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTACCTCACAAGATTCCTaGAGTGGAAGATTATGGCAT +
Preference number: 5 (lower is better)
Translates to: ALLDIQHLPSRTLAITYITSQDS*SGRLWH
Trigger: ATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGT...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TGGGCTGTGATGGAAGGCATAACAAGAAAGCTGAAACTGTTACGAGCCAAACTTATCATAACATCACCATaGGCATCCAATGCATCATTA +
Preference number: 5 (lower is better)
Translates to: WAVMEGITRKLKLLRAKLIITSP*ASNASL
Trigger: TAATGATGCATTGGATGCCAATGGTGATGTTATGAT...AAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGTTATGCCTTCCATCACAGCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AGGGCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATCATAACATCACCATaGGCATCCAATGCATCATTA +
Preference number: 5 (lower is better)
Translates to: RALLDIQHLPSRTLAITYIITSP*ASNASL
Trigger: TAATGATGCATTGGATGCCAATGGTGATGTTATGAT...ATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AATCCTGATCTGAGAAAGTGTCATAACATAGCAACTATCTTGTCGGGGGCACTTAAACTTCCTAATCTCTaGCACATGTCAATCGCACTA +
Preference number: 5 (lower is better)
Translates to: NPDLRKCHNIATILSGALKLPNL*HMSIAL
Trigger: TAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTT...AAGTGCCCCCGACAAGATAGTTGCTATGTTATGACACTTTCTCAGATCAGGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATACACGAACACACTGATTaGCTATTCTTTAGGGGAGCC +
Preference number: 5 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGIHEHTD*LFFRGA
Trigger: GGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTGCCCACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAATTGAACCATGTCTaGGATCTAATCCTCGCTCTG +
Preference number: 5 (lower is better)
Translates to: LPTCKKIILTKQNAHHEEKLNHV*DLILAL
Trigger: CAGAGCGAGGATTAGATCCAAGACATGGTTCAATTT...CTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGTGGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp TTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTTGCCACCAACAGAGAGAATCACAGCAGTAGGCACTaGGAACTTGATAAAGAATTT +
Preference number: 5 (lower is better)
Translates to: FSYISVGAMKWFATNRENHSSRH*ELDKEF
Trigger: AAATTCTTTATCAAGTTCCAAGTGCCTACTGCTGTG...ATTCTCTCTGTTGGTGGCAAACCACTTCATAGCACCAACAGAGATGTAGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGAATTAGCCCTGATGTaGACTGATAAAAAGATGAGA +
Preference number: 5 (lower is better)
Translates to: LGDINVLVYAALNKTIEAELALM*TDKKMR
Trigger: TCTCATCTTTTTATCAGTCAACATCAGGGCTAATTC...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp CTCGGAGACATAAATGTGTTAGTTTATGCAGCTCTGAACAAGACCATCGAAGCCGGAGGAATAGTCAACTaGCAAATAATATCACCTCTT +
Preference number: 5 (lower is better)
Translates to: LGDINVLVYAALNKTIEAGGIVN*QIISPL
Trigger: AAGAGGTGATATTATTTGCAAGTTGACTATTCCTCC...GGCTTCGATGGTCTTGTTCAGAGCTGCATAAACTAACACATTTATGTCTCCGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp TGTACTTCTTACAGATCACAGTACACATACGGCTGTTGGTGCATGTCACCACATAGAGAAGAAATGCTATaGGTCAAATCGTTCTTTGGA +
Preference number: 5 (lower is better)
Translates to: CTSYRSQYTYGCWCMSPHREEML*VKSFFG
Trigger: TCCAAAGAACGATTTGACCAATAGCATTTCTTCTCT...ATGTGGTGACATGCACCAACAGCCGTATGTGTACTGTGATCTGTAAGAAGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp TCTGCATTTTCAGTGCGTATTTCCAACAATGAGTATGTAAGCAAGCAAACAATGAACTCTGATCCCACTTaGGGAGACAACAAGCCCTTT +
Preference number: 5 (lower is better)
Translates to: SAFSVRISNNEYVSKQTMNSDPT*GDNKPF
Trigger: AAAGGGCTTGTTGTCTCCCAAAGTGGGATCAGAGTT...CATTGTTTGCTTGCTTACATACTCATTGTTGGAAATACGCACTGAAAATGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR CAA 90 bp GGTAGAGTACATATTATTCTTATTTGCAGCATAAGGCATAACATGCTCCGAAATGTAGACGTCGGATCCTaGTCAGCCATGATCATAGAT +
Preference number: 5 (lower is better)
Translates to: GRVHIILICSIRHNMLRNVDVGS*SAMIID
Trigger: ATCTATGATCATGGCTGACAAGGATCCGACGTCTAC...ATTTCGGAGCATGTTATGCCTTATGCTGCAAATAAGAATAATATGTACTCTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCCTTCTTCAGCTGGACTaGTGTCTTTGCATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFLLQLD*CLCILK
Trigger: TTTGAGGATGCAAAGACACAAGTCCAGCTGAAGAAG...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TCTGCATTTTCAGTGCGTATTTCCAACAATGAGTATGTAAGCAAGCAAACAATGCTTCTTCAGCTGGACTaGTGTCTTTGCATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: SAFSVRISNNEYVSKQTMLLQLD*CLCILK
Trigger: TTTGAGGATGCAAAGACACAAGTCCAGCTGAAGAAG...CATTGTTTGCTTGCTTACATACTCATTGTTGGAAATACGCACTGAAAATGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637393.1
CDS-3UTR CAA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATCCATCCCATGTAACATaGACCATAAATGGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: TLLLILPKATFSVSLSRDPSHVT*TINGCK
Trigger: CTTGCACCCATTTATGGTCAATGTTACATGGGATGG...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGTTGAATTGTTGATTTaGACGAACTTCCGACATGGC +
Preference number: 5 (lower is better)
Translates to: TVDSSKGHVFSFFIQRCMVELLI*TNFRHG
Trigger: GCCATGTCGGAAGTTCGTCAAAATCAACAATTCAAC...CATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CCAACAGAATTTCTGGATGTGAAGGAAGATAAACCTAAAACCATGCTAGCCTTCCCCTCATTGGTTGAATaGTTGATTTTGACGAACTTC +
Preference number: 5 (lower is better)
Translates to: PTEFLDVKEDKPKTMLAFPSLVE*LILTNF
Trigger: GAAGTTCGTCAAAATCAACAATTCAACCAATGAGGG...GAAGGCTAGCATGGTTTTAGGTTTATCTTCCTTCACATCCAGAAATTCTGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CCACCAACAGAGAGAATAACTCAGAAGGGAGAAATTGCTTGTCTCACTAAACTGACATTCATCCCCTCATaGGTTGAATTGTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: PPTERITQKGEIACLTKLTFIPS*VELLIL
Trigger: CAAAATCAACAATTCAACCAATGAGGGGATGAATGT...CAGTTTAGTGAGACAAGCAATTTCTCCCTTCTGAGTTATTCTCTCTGTTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATATCAATGCAGAACCCCTaGCAGCATTTCTTCACATTC +
Preference number: 5 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGISMQNP*QHFFTF
Trigger: GAATGTGAAGAAATGCTGCAAGGGGTTCTGCATTGA...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCTCAATGCAGAACCCCTaGCAGCATTTCTTCACATTC +
Preference number: 5 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFSMQNP*QHFFTF
Trigger: GAATGTGAAGAAATGCTGCAAGGGGTTCTGCATTGA...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACATGCTGGAAATGTTTTaGGCTGACCGGAGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYMLEMF*ADRRSF
Trigger: AAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCAT...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATATGCTGGAAATGTTTTaGGCTGACCGGAGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: TLLLILPKATFSVSLSRDMLEMF*ADRRSF
Trigger: AAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCAT...ATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAGAAATGGGTGAGTCCATTCTaGAGGAGTTCATGTTGGACA +
Preference number: 5 (lower is better)
Translates to: TCKKIILTKQNAHHEEKKWVSPF*RSSCWT
Trigger: TGTCCAACATGAACTCCTCAAGAATGGACTCACCCA...TTTCTTCTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTAAGTCAGCAGCTCTTTaGGGTGAGTCCATTCTTGAG +
Preference number: 5 (lower is better)
Translates to: GIWNIGNHNITIGIQCIIKSAAL*GESILE
Trigger: CTCAAGAATGGACTCACCCAAAAGAGCTGCTGACTT...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp TTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTAGTTGGCCACAAATGTTaGGAGTTCGTTCATGTTGTC +
Preference number: 5 (lower is better)
Translates to: LLLILPKATFSVSLSRDVVGHKC*EFVHVV
Trigger: GACAACATGAACGAACTCCAAACATTTGTGGCCAAC...TACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATAAGTTTATACTGGTCGTaGTTGGAAAGCCCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGISLYWS*LESPSS
Trigger: TGAAGAGGGGCTTTCCAACAACGACCAGTATAAACT...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp ATGAACTATAATGAAGGTAGCACAGTCATCACGAACACACTGATTTGCTATTCTAGTTTATACTGGTCGTaGTTGGAAAGCCCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: MNYNEGSTVITNTLICYSSLYWS*LESPSS
Trigger: TGAAGAGGGGCTTTCCAACAACGACCAGTATAAACT...AGAATAGCAAATCAGTGTGTTCGTGATGACTGTGCTACCTTCATTATAGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAAACCTCACAAGATTCCTaGAGTGGAAGATTATGGCAT +
Preference number: 5 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAETSQDS*SGRLWH
Trigger: ATGCCATAATCTTCCACTCAAGGAATCTTGTGAGGT...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TTTCACAACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCACGAACACACTGATTaGCTATTCTTTAGGGGAGCC +
Preference number: 5 (lower is better)
Translates to: FHNITVDSSKGHVFSFFIHEHTD*LFFRGA
Trigger: GGCTCCCCTAAAGAATAGCAAATCAGTGTGTTCGTG...GATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCAGAGTGCCTCGTGTTTaGAAGGCTTTTGATTTGAGG +
Preference number: 5 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFRVPRV*KAFDLR
Trigger: CCTCAAATCAAAAGCCTTCAAAACACGAGGCACTCT...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAACTATTCCATGCATCCTaGAGCTTTAAGGGAATCATC +
Preference number: 5 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAELFHAS*SFKGII
Trigger: GATGATTCCCTTAAAGCTCAAGGATGCATGGAATAG...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp CCGTGTGCAAAAGAGCCAACAACAACAACAACAAAATACCTCCCTACATCTTCTCTGATACTCTCTAACTaGATGATCTTAAACAGGCAA +
Preference number: 5 (lower is better)
Translates to: PCAKEPTTTTTKYLPTSSLILSN*MILNRQ
Trigger: TTGCCTGTTTAAGATCATCAAGTTAGAGAGTATCAG...AGAAGATGTAGGGAGGTATTTTGTTGTTGTTGTTGTTGGCTCTTTTGCACACGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp TTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATAGCTGGTCAATGTGCTaGGTTCTTCCTCAATGCATG +
Preference number: 5 (lower is better)
Translates to: FGLTTNHSSVFWEDFLIHSWSMC*VLPQCM
Trigger: CATGCATTGAGGAAGAACCAAGCACATTGACCAGCT...ATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp ACAAGAAAGCTGAAACTGTTACGAGCCAAACTTCCTAATCTCTTGCACATGTCATCATTGGTTGAATTGTaGATTTTGACGAACTTCCGA +
Preference number: 5 (lower is better)
Translates to: TRKLKLLRAKLPNLLHMSSLVEL*ILTNFR
Trigger: TCGGAAGTTCGTCAAAATCAACAATTCAACCAATGA...TGACATGTGCAAGAGATTAGGAAGTTTGGCTCGTAACAGTTTCAGCTTTCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GCACTATTGGACATCCAACATTTACCCTCCAGAACATTGGCCATTACGTATATTACATTCATCCCCTCATaGGTTGAATTGTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: ALLDIQHLPSRTLAITYITFIPS*VELLIL
Trigger: CAAAATCAACAATTCAACCAATGAGGGGATGAATGT...AATATACGTAATGGCCAATGTTCTGGAGGGTAAATGTTGGATGTCCAATAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000562109.5
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AATGACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGTCAATGCAGAACCCCTaGCAGCATTTCTTCACATTC +
Preference number: 5 (lower is better)
Translates to: NDKYFEEFFLHLCWCYEVSMQNP*QHFFTF
Trigger: GAATGTGAAGAAATGCTGCAAGGGGTTCTGCATTGA...CACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AATTTTTCAACCTGCCACTTTATCCCTTTCTTCAAGAATGTAAAGCAGAATGCATCAATGCAGAACCCCTaGCAGCATTTCTTCACATTC +
Preference number: 5 (lower is better)
Translates to: NFSTCHFIPFFKNVKQNASMQNP*QHFFTF
Trigger: GAATGTGAAGAAATGCTGCAAGGGGTTCTGCATTGA...TGCATTCTGCTTTACATTCTTGAAGAAAGGGATAAAGTGGCAGGTTGAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTCTTGAGGAGTTCATGTaGGACATGCTGGAAATGTTT +
Preference number: 5 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVLEEFM*DMLEMF
Trigger: AAACATTTCCAGCATGTCCAACATGAACTCCTCAAG...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AATGACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTGGCCACAAATGTTaGGAGTTCGTTCATGTTGTC +
Preference number: 5 (lower is better)
Translates to: NDKYFEEFFLHLCWCYEVVGHKC*EFVHVV
Trigger: GACAACATGAACGAACTCCAAACATTTGTGGCCAAC...CACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAAAAGTTGTCCTTGGTTTaGTGGTTCTTACTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAEKLSLV*WFLLLS
Trigger: TGACAACAGTAAGAACCACAAAACCAAGGACAACTT...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GCATTTCTGATGAGAAAATTACATGGTGGGCTGACCTTAATGGAATTTGGAATATTATACTGGTCGTTGTaGGAAAGCCCCTCTTCATTA +
Preference number: 5 (lower is better)
Translates to: AFLMRKLHGGLTLMEFGILYWSL*ESPSSL
Trigger: TAATGAAGAGGGGCTTTCCAACAACGACCAGTATAA...TATTCCAAATTCCATTAAGGTCAGCCCACCATGTAATTTTCTCATCAGAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp AATGACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGTCCAATGCATCATTATaGCCAACATACCCAGTAGGC +
Preference number: 5 (lower is better)
Translates to: NDKYFEEFFLHLCWCYEVSNASL*PTYPVG
Trigger: GCCTACTGGGTATGTTGGCAATAATGATGCATTGGA...CACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGCATATATGCACAGGTTaGAGGAGAATAAGAATGGGA +
Preference number: 5 (lower is better)
Translates to: TVDSSKGHVFSFFIQRCMHICTG*RRIRMG
Trigger: TCCCATTCTTATTCTCCTCAAACCTGTGCATATATG...CATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGTGTGTACACAAGCAGTaGTATTCACAGGATAAGTGC +
Preference number: 5 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWCVHKQ*YSQDKC
Trigger: GCACTTATCCTGTGAATACAACTGCTTGTGTACACA...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTCAGGCAATGACCAGCTaGTGTATTATGCAACAAGTC +
Preference number: 5 (lower is better)
Translates to: GIWNIGNHNITIGIQCIIQAMTS*CIMQQV
Trigger: GACTTGTTGCATAATACACAAGCTGGTCATTGCCTG...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp GGTAGAGTACATATTATTCTTATTTGCAGCATAAGGCATAACATGCTCCGAAATGTGAAGGATAAGTCTTaGCCATCCCATGTAACATTG +
Preference number: 5 (lower is better)
Translates to: GRVHIILICSIRHNMLRNVKDKS*PSHVTL
Trigger: CAATGTTACATGGGATGGCAAAGACTTATCCTTCAC...ATTTCGGAGCATGTTATGCCTTATGCTGCAAATAAGAATAATATGTACTCTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp TTTCACAACATTACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCGTGAAGGATAAGTCTTaGCCATCCCATGTAACATTG +
Preference number: 5 (lower is better)
Translates to: FHNITVDSSKGHVFSFFIVKDKS*PSHVTL
Trigger: CAATGTTACATGGGATGGCAAAGACTTATCCTTCAC...GATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGTAGAGTACATATTATTCTTATTTGCAGCATAAGGCATAACATGCTCCGAAATTTAGGGTTGGACTCATaGAGAGTAAGAGGATGTTGT +
Preference number: 5 (lower is better)
Translates to: GRVHIILICSIRHNMLRNLGLDS*RVRGCC
Trigger: ACAACATCCTCTTACTCTCAATGAGTCCAACCCTAA...ATTTCGGAGCATGTTATGCCTTATGCTGCAAATAAGAATAATATGTACTCTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp ACATGCAAGAAAATAATACTTACAAAACAGAACGCACACCATGAGGAGAAGAAATTATACTGGTCGTTGTaGGAAAGCCCCTCTTCATTA +
Preference number: 5 (lower is better)
Translates to: TCKKIILTKQNAHHEEKKLYWSL*ESPSSL
Trigger: TAATGAAGAGGGGCTTTCCAACAACGACCAGTATAA...TTTCTTCTCCTCATGGTGTGCGTTCTGTTTTGTAAGTATTATTTTCTTGCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AATGACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGTTGTACACGCGTCTATaGCTGCAGGAATTTAAAACC +
Preference number: 5 (lower is better)
Translates to: NDKYFEEFFLHLCWCYEVLYTRL*LQEFKT
Trigger: GGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAA...CACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGTAGAGTACATATTATTCTTATTTGCAGCATAAGGCATAACATGCTCCGAAATATACTAGGCATTTTCTaGTACACGCGTCTATTGCTG +
Preference number: 5 (lower is better)
Translates to: GRVHIILICSIRHNMLRNILGIF*YTRLLL
Trigger: CAGCAATAGACGCGTGTACAAGAAAATGCCTAGTAT...ATTTCGGAGCATGTTATGCCTTATGCTGCAAATAAGAATAATATGTACTCTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535259.6
ENST00000562109.5
ENST00000675398.1
CDS-3UTR CAA 90 bp AAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGGGGTTAATAGCAGAAATCATAACATCACCATaGGCATCCAATGCATCATTA +
Preference number: 5 (lower is better)
Translates to: KGHVFSFFIQRCMGLIAEIITSP*ASNASL
Trigger: TAATGATGCATTGGATGCCAATGGTGATGTTATGAT...TTCTGCTATTAACCCCATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AATTTTTCAACCTGCCACTTTATCCCTTTCTTCAAGAATGTAAAGCAGAATGCACTATTCCATGCATCCTaGAGCTTTAAGGGAATCATC +
Preference number: 5 (lower is better)
Translates to: NFSTCHFIPFFKNVKQNALFHAS*SFKGII
Trigger: GATGATTCCCTTAAAGCTCAAGGATGCATGGAATAG...TGCATTCTGCTTTACATTCTTGAAGAAAGGGATAAAGTGGCAGGTTGAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp AATGACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGTTCACAACATTACTGTaGATTCTTCCAAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: NDKYFEEFFLHLCWCYEVFTTLL*ILPKAT
Trigger: CGTGGCCTTTGGAAGAATCAACAGTAATGTTGTGAA...CACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp ACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGAGTATTTTAAATTGGTaGCATGTGCGTGCTATTACC +
Preference number: 5 (lower is better)
Translates to: TVDSSKGHVFSFFIQRCMSILNW*HVRAIT
Trigger: GGTAATAGCACGCACATGCAACCAATTTAAAATACT...CATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp CTGAAATTTATTGCAACCACTTTTCATTATAGGAACACTGTAGGTCAGGTGTACCACAGCAGTAGGCACTaGGAACTTGATAAAGAATTT +
Preference number: 5 (lower is better)
Translates to: LKFIATTFHYRNTVGQVYHSSRH*ELDKEF
Trigger: AAATTCTTTATCAAGTTCCAAGTGCCTACTGCTGTG...GTACACCTGACCTACAGTGTTCCTATAATGAAAAGTGGTTGCAATAAATTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp ACTGTTGATTCTTCCAAAGGCCACGTTTTCAGTTTCTTTATCCAGAGATGTATGAGAGAAGAAATGCTATaGGTCAAATCGTTCTTTGGA +
Preference number: 5 (lower is better)
Translates to: TVDSSKGHVFSFFIQRCMREEML*VKSFFG
Trigger: TCCAAAGAACGATTTGACCAATAGCATTTCTTCTCT...CATACATCTCTGGATAAAGAAACTGAAAACGTGGCCTTTGGAAGAATCAACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp TTTGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATAAACTTCCTAATCTCTaGCACATGTCAATCGCACTA +
Preference number: 5 (lower is better)
Translates to: FGLTTNHSSVFWEDFLIHKLPNL*HMSIAL
Trigger: TAGTGCGATTGACATGTGCAAGAGATTAGGAAGTTT...ATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
CDS-3UTR CAA 90 bp GGAATTTGGAATATAGGAAATCATAACATCACCATTGGCATCCAATGCATCATTGGCTCCAGATGTGTCTaGGAAATGAACTATAATGAA +
Preference number: 5 (lower is better)
Translates to: GIWNIGNHNITIGIQCIIGSRCV*EMNYNE
Trigger: TTCATTATAGTTCATTTCCAAGACACATCTGGAGCC...AATGATGCATTGGATGCCAATGGTGATGTTATGATTTCCTATATTCCAAATTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000535259.6
ENST00000674742.1
ENST00000675398.1
CDS-3UTR CAA 90 bp GGAAGACTTTTTAATTCATTCATGTCAAAACATCCCAGACTCATGAGGAAATGGAATAATTCAGGGCATTaGTCATTTCCTGTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: GRLFNSFMSKHPRLMRKWNNSGH*SFPVKD
Trigger: ATCCTTCACAGGAAATGACAAATGCCCTGAATTATT...CCATTTCCTCATGAGTCTGGGATGTTTTGACATGAATGAATTAAAAAGTCTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp TGGCTTGACGACAAATCACTCTTCTGTATTCTGGGAAGACTTTTTAATTCATTCAATAATTCAGGGCATTaGTCATTTCCTGTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: WLDDKSLFCILGRLFNSFNNSGH*SFPVKD
Trigger: ATCCTTCACAGGAAATGACAAATGCCCTGAATTATT...GAATGAATTAAAAAGTCTTCCCAGAATACAGAAGAGTGATTTGTCGTCAAGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS-3UTR CAA 90 bp GACAAATACTTTGAGGAATTTTTCCTACATCTCTGTTGGTGCTATGAAGTGGTTCTGATACTCTCTAACTaGATGATCTTAAACAGGCAA +
Preference number: 5 (lower is better)
Translates to: DKYFEEFFLHLCWCYEVVLILSN*MILNRQ
Trigger: TTGCCTGTTTAAGATCATCAAGTTAGAGAGTATCAG...AACCACTTCATAGCACCAACAGAGATGTAGGAAAAATTCCTCAAAGTATTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000396573.6
CDS GCA 72 bp TCCACCCGCACCCCCTACCACCTCCCCAGCGCCGGCTaGTGGGAGTTGTGCGACCGGGAGCTGCTGAGCGAG +
Preference number: 6 (lower is better)
Translates to: STRTPYHLPSAG*WELCDRELLSE
Trigger: CTCGCTCAGCAGCTCCCGGTCGCACAACTCCCAGCAGCCGGCGCTGGGGAGGTGGTAGGGGGTGCGGGTGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS GCA 72 bp GTAGCCCGAGAAGGTCGAGGATGCAGTGGGGCGCGCTaGGCGCACGAGCATCTCGGCCGCCTCAGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: VAREGRGCSGAR*AHEHLGRLSSH
Trigger: GTGGCTGCTGAGGCGGCCGAGATGCTCGTGCGCGCAGCGCGCCCCACTGCATCCTCGACCTTCTCGGGCTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000566665.1
ENST00000675189.1
ENST00000675398.1
ENST00000676032.1
CDS CCA 72 bp GACGGTCCCTGTAGCCCGAGAAGGTCGAGGATGCAGTaGGGCGCGCTGCGCGCACGAGCATCTCGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: DGPCSPRRSRMQ*GALRARASRPP
Trigger: AGGCGGCCGAGATGCTCGTGCGCGCAGCGCGCCCCACTGCATCCTCGACCTTCTCGGGCTACAGGGACCGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000566665.1
ENST00000675189.1
ENST00000675398.1
ENST00000676032.1
CDS CAA 72 bp ACCCCCTACCACCTCCCCAGCGCCGGCTGCTGGGAGTaGTGCGACCGGGAGCTGCTGAGCGAGGGAGGTAGG +
Preference number: 6 (lower is better)
Translates to: TPYHLPSAGCWE*CDRELLSEGGR
Trigger: CCTACCTCCCTCGCTCAGCAGCTCCCGGTCGCACAACTCCCAGCAGCCGGCGCTGGGGAGGTGGTAGGGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS GCA 72 bp CCACTGACGGTCCCTGTAGCCCGAGAAGGTCGAGGATaGAGTGGGGCGCGCTGCGCGCACGAGCATCTCGGC +
Preference number: 6 (lower is better)
Translates to: PLTVPVAREGRG*SGARCAHEHLG
Trigger: GCCGAGATGCTCGTGCGCGCAGCGCGCCCCACTGCATCCTCGACCTTCTCGGGCTACAGGGACCGTCAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000566665.1
ENST00000675189.1
ENST00000675398.1
ENST00000676032.1
CDS CAA 90 bp GCGGGAGCTCCACTCCAGGGTGCACAGGAGAATGGGAGCCCCAGGTaGGCCACCCACGAGAAGCTAACTGGGCACCTCCACCCGCACCCC +
Preference number: 6 (lower is better)
Translates to: AGAPLQGAQENGSPR*ATHEKLTGHLHPHP
Trigger: GGGGTGCGGGTGGAGGTGCCCAGTTAGCTTCTCGTGGGTGGCCAACCTGGGGCTCCCATTCTCCTGTGCACCCTGGAGTGGAGCTCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS GCA 72 bp CAGTGGCCGCTCCTGGTCATCTCCAGGGCTGATGGCTaGGGCCGCGATTCTCAGCGCTCACCCGGTCCCATG +
Preference number: 6 (lower is better)
Translates to: QWPLLVISRADG*GRDSQRSPGPM
Trigger: CATGGGACCGGGTGAGCGCTGAGAATCGCGGCCGCAGCCATCAGCCCTGGAGATGACCAGGAGCGGCCACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396573.6
ENST00000675189.1
ENST00000675398.1
ENST00000676032.1
CDS CAA 72 bp GCACCCTCTCCGCAACCCAGCTCCGGGCTGGTGTGTTaGAGGGCGAGTGTGTGTGTGAGTGTGGGAGCGCGC +
Preference number: 6 (lower is better)
Translates to: APSPQPSSGLVC*RASVCVSVGAR
Trigger: GCGCGCTCCCACACTCACACACACACTCGCCCTCAAACACACCAGCCCGGAGCTGGGTTGCGGAGAGGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675189.1
CDS TCA 72 bp AGGCAGGGTCAGCCCACCAACGAGGGGAGGGAGGGTTaGGGGGAAGGCTGCAGTCTGCAGTGCTCACAAGCC +
Preference number: 6 (lower is better)
Translates to: RQGQPTNEGREG*GEGCSLQCSQA
Trigger: GGCTTGTGAGCACTGCAGACTGCAGCCTTCCCCTCAACCCTCCCTCCCCTCGTTGGTGGGCTGACCCTGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330684.4
ENST00000566665.1
CDS GCA 72 bp GTCCGTGTCGTCCCCAAACACGAGGCCGTGGATGCGTaGCCCGGACATGAGGTCGCACACGTGCGTGATGAG +
Preference number: 6 (lower is better)
Translates to: VRVVPKHEAVDA*PGHEVAHVRDE
Trigger: CTCATCACGCACGTGTGCGACCTCATGTCCGGGGCACGCATCCACGGCCTCGTGTTTGGGGACGACACGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000566665.1
ENST00000675189.1
ENST00000675398.1
ENST00000676032.1
CDS CCA 72 bp GGGGCGTCCGAAGACCTGCAGCAGCTGCCATGCAGCTaGTGGCTTCCCAGGTCCTGGCAGGGCATCAGTTTC +
Preference number: 6 (lower is better)
Translates to: GASEDLQQLPCS*WLPRSWQGISF
Trigger: GAAACTGATGCCCTGCCAGGACCTGGGAAGCCACCAGCTGCATGGCAGCTGCTGCAGGTCTTCGGACGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566665.1
ENST00000676032.1
CDS CAA 72 bp CCACTCCAGGGTGCACAGGAGAATGGGAGCCCCAGGTaGGCCACCCACGAGAAGCTAACTGGGCACCTCCAC +
Preference number: 6 (lower is better)
Translates to: PLQGAQENGSPR*ATHEKLTGHLH
Trigger: GTGGAGGTGCCCAGTTAGCTTCTCGTGGGTGGCCAACCTGGGGCTCCCATTCTCCTGTGCACCCTGGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS CAA 90 bp ATGCGTGCCCCGGACATGAGGTCGCACACGTGCGTGATGAGGCTCTaGGGGTCGGTGCGGTTCATCAGCAGAGCTACCACGTTCACGTCC +
Preference number: 6 (lower is better)
Translates to: MRAPDMRSHTCVMRL*GSVRFISRATTFTS
Trigger: GGACGTGAACGTGGTAGCTCTGCTGATGAACCGCACCGACCCCAAGAGCCTCATCACGCACGTGTGCGACCTCATGTCCGGGGCACGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000566665.1
ENST00000675189.1
ENST00000675398.1
ENST00000676032.1
CDS GCA 72 bp CAGTCGGAGAAGGACTTGTACCTGGGCCACACGGCGTaGCTCAGGCTCAGCGTATGGTTCTCCCACTTGCCC +
Preference number: 6 (lower is better)
Translates to: QSEKDLYLGHTA*LRLSVWFSHLP
Trigger: GGGCAAGTGGGAGAACCATACGCTGAGCCTGAGGCACGCCGTGTGGCCCAGGTACAAGTCCTTCTCCGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000535259.6
ENST00000562109.5
ENST00000566683.1
ENST00000636273.2
ENST00000674742.1
ENST00000675189.1
ENST00000675398.1
CDS CCA 72 bp GATAGCGGGAGCTCCACTCCAGGGTGCACAGGAGAATaGGAGCCCCAGGTTGGCCACCCACGAGAAGCTAAC +
Preference number: 6 (lower is better)
Translates to: DSGSSTPGCTGE*EPQVGHPREAN
Trigger: GTTAGCTTCTCGTGGGTGGCCAACCTGGGGCTCCCATTCTCCTGTGCACCCTGGAGTGGAGCTCCCGCTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330684.4
CDS CCA 72 bp TCGGGACCTCTGGCCTCTCCATCTGCCCGTAGCAGCTaGCCTTGGCCTCGGGGATGTAGGAGAACTTCTCCA +
Preference number: 6 (lower is better)
Translates to: SGPLASPSARSS*PWPRGCRRTSP
Trigger: TGGAGAAGTTCTCCTACATCCCCGAGGCCAAGGCCAGCTGCTACGGGCAGATGGAGAGGCCAGAGGTCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000535259.6
ENST00000562109.5
ENST00000568247.3
ENST00000636273.2
ENST00000637393.1
ENST00000674742.1
ENST00000675189.1
ENST00000675398.1
CDS CCA 72 bp TACCTGGGCCACACGGCGTGCCTCAGGCTCAGCGTATaGTTCTCCCACTTGCCCACCTTTTCCCATTCCCGG +
Preference number: 6 (lower is better)
Translates to: YLGHTACLRLSV*FSHLPTFSHSR
Trigger: CCGGGAATGGGAAAAGGTGGGCAAGTGGGAGAACCATACGCTGAGCCTGAGGCACGCCGTGTGGCCCAGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000535259.6
ENST00000562109.5
ENST00000566683.1
ENST00000636273.2
ENST00000674742.1
ENST00000675189.1
ENST00000675398.1
CDS CCA 72 bp GCCTCTCTCCACATAGTTCTCAGCAGTGGCCGCTCCTaGTCATCTCCAGGGCTGATGGCTGCGGCCGCGATT +
Preference number: 6 (lower is better)
Translates to: ASLHIVLSSGRS*SSPGLMAAAAI
Trigger: AATCGCGGCCGCAGCCATCAGCCCTGGAGATGACCAGGAGCGGCCACTGCTGAGAACTATGTGGAGAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396573.6
ENST00000675189.1
ENST00000675398.1
ENST00000676032.1
CDS CCA 72 bp CCTTTCTTACGGGTGCAAGGTGTGCATCGGGACCTCTaGCCTCTCCATCTGCCCGTAGCAGCTGGCCTTGGC +
Preference number: 6 (lower is better)
Translates to: PFLRVQGVHRDL*PLHLPVAAGLG
Trigger: GCCAAGGCCAGCTGCTACGGGCAGATGGAGAGGCCAGAGGTCCCGATGCACACCTTGCACCCGTAAGAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568247.3
ENST00000637393.1
CDS CAA 72 bp CCGGACATGAGGTCGCACACGTGCGTGATGAGGCTCTaGGGGTCGGTGCGGTTCATCAGCAGAGCTACCACG +
Preference number: 6 (lower is better)
Translates to: PDMRSHTCVMRL*GSVRFISRATT
Trigger: CGTGGTAGCTCTGCTGATGAACCGCACCGACCCCAAGAGCCTCATCACGCACGTGTGCGACCTCATGTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000566665.1
ENST00000675189.1
ENST00000675398.1
ENST00000676032.1
CDS CCA 72 bp GACCATAAATGGGTGCAAGGTGTGCATCGGGACCTCTaGCCTCTCCATCTGCCCGTAGCAGCTGGCCTTGGC +
Preference number: 6 (lower is better)
Translates to: DHKWVQGVHRDL*PLHLPVAAGLG
Trigger: GCCAAGGCCAGCTGCTACGGGCAGATGGAGAGGCCAGAGGTCCCGATGCACACCTTGCACCCATTTATGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000535259.6
ENST00000562109.5
ENST00000636273.2
ENST00000674742.1
ENST00000675189.1
ENST00000675398.1
CDS CCA 72 bp TGTCATCCGGCTCACAGTCGGAGAAGGACTTGTACCTaGGCCACACGGCGTGCCTCAGGCTCAGCGTATGGT +
Preference number: 6 (lower is better)
Translates to: CHPAHSRRRTCT*ATRRASGSAYG
Trigger: ACCATACGCTGAGCCTGAGGCACGCCGTGTGGCCCAGGTACAAGTCCTTCTCCGACTGTGAGCCGGATGACA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000535259.6
ENST00000562109.5
ENST00000636273.2
ENST00000674742.1
ENST00000675189.1
ENST00000675398.1
CDS CAA 72 bp AGATGGTTGTCATCCGGCTCACAGTCGGAGAAGGACTaGTACCTGGGCCACACGGCGTGCCTCAGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: RWLSSGSQSEKD*YLGHTACLRLS
Trigger: GCTGAGCCTGAGGCACGCCGTGTGGCCCAGGTACAAGTCCTTCTCCGACTGTGAGCCGGATGACAACCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000535259.6
ENST00000562109.5
ENST00000636273.2
ENST00000674742.1
ENST00000675189.1
ENST00000675398.1
CDS TCA 72 bp AGAAGAGCAACCCAGGCCGGTCGGAGCACACGCCCGTaGAACAGAAGCGCAGCTTCCAGTAGAAGAGGTGCT +
Preference number: 6 (lower is better)
Translates to: RRATQAGRSTRP*NRSAASSRRGA
Trigger: AGCACCTCTTCTACTGGAAGCTGCGCTTCTGTTTCACGGGCGTGTGCTCCGACCGGCCTGGGTTGCTCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000463531.1
ENST00000535259.6
ENST00000562109.5
ENST00000636273.2
ENST00000674742.1
CDS GCA 72 bp CCTCTGTGCCCCATGGTACTCGTAAATCTCCAAACATaGCACCACCGCCACCACCACCACCCCACAGCCTAC +
Preference number: 6 (lower is better)
Translates to: PLCPMVLVNLQT*HHRHHHHPTAY
Trigger: GTAGGCTGTGGGGTGGTGGTGGTGGCGGTGGTGGCATGTTTGGAGATTTACGAGTACCATGGGGCACAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566665.1
CDS CCA 72 bp GAGGAGATAAAATCCAGCATCTGGGCTACGGCCTCCTaGTCCGTGTCGTCCCCAAACACGAGGCCGTGGATG +
Preference number: 6 (lower is better)
Translates to: EEIKSSIWATAS*SVSSPNTRPWM
Trigger: CATCCACGGCCTCGTGTTTGGGGACGACACGGACCAGGAGGCCGTAGCCCAGATGCTGGATTTTATCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000566665.1
ENST00000675189.1
ENST00000675398.1
ENST00000676032.1
CDS CAA 90 bp ACGATGCTGAGATGGTTGTCATCCGGCTCACAGTCGGAGAAGGACTaGTACCTGGGCCACACGGCGTGCCTCAGGCTCAGCGTATGGTTC +
Preference number: 6 (lower is better)
Translates to: TMLRWLSSGSQSEKD*YLGHTACLRLSVWF
Trigger: GAACCATACGCTGAGCCTGAGGCACGCCGTGTGGCCCAGGTACAAGTCCTTCTCCGACTGTGAGCCGGATGACAACCATCTCAGCATCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000535259.6
ENST00000562109.5
ENST00000636273.2
ENST00000674742.1
ENST00000675189.1
ENST00000675398.1
CDS CCA 72 bp CAGAAACGTCATCTCTCTAAGGCAGGGGCTTTGTCGTaGTCAGTGCTGCGTTCCTGGCACCCAGCAGAGAGC +
Preference number: 6 (lower is better)
Translates to: QKRHLSKAGALS*SVLRSWHPAES
Trigger: GCTCTCTGCTGGGTGCCAGGAACGCAGCACTGACCACGACAAAGCCCCTGCCTTAGAGAGATGACGTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566670.2
ENST00000566683.1
CDS TCA 72 bp GGATCCTTGTCAGCCATGATCATAGATGCGCCCCCATaGATGCCCAAGATGGGGACGAAGGTGTGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: GSLSAMIIDAPP*MPKMGTKVWEE
Trigger: CTCCTCCCACACCTTCGTCCCCATCTTGGGCATTCATGGGGGCGCATCTATGATCATGGCTGACAAGGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675189.1
ENST00000675398.1
CDS TCA 72 bp CACCACCACCACCCCACAGCCTACTTCTCAGTTTTCTaGGCGCTTCCTGGCACACACACACCAAAGTGCTCC +
Preference number: 6 (lower is better)
Translates to: HHHHPTAYFSVF*ALPGTHTPKCS
Trigger: GGAGCACTTTGGTGTGTGTGTGCCAGGAAGCGCTCAGAAAACTGAGAAGTAGGCTGTGGGGTGGTGGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566665.1
CDS CCA 72 bp ATGACCGTGGCTTGCTGCTGGATGGACGCTCCAAACTaGAAGAAGGTAGACGTCGGATCCTCCTCCTGCCAT +
Preference number: 6 (lower is better)
Translates to: MTVACCWMDAPN*KKVDVGSSSCH
Trigger: ATGGCAGGAGGAGGATCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCATCCAGCAGCAAGCCACGGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535259.6
ENST00000568247.3
CDS TCA 72 bp CTTACCTTGTCAGCCATGATCATAGATGCGCCCCCATaGATGCCCAAGATGGGGACGAAGGTGTGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: LTLSAMIIDAPP*MPKMGTKVWEE
Trigger: CTCCTCCCACACCTTCGTCCCCATCTTGGGCATTCATGGGGGCGCATCTATGATCATGGCTGACAAGGTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566665.1
ENST00000676032.1
CDS TCA 72 bp AAGTCCTTGTCAGCCATGATCATAGATGCGCCCCCATaGATGCCCAAGATGGGGACGAAGGTGTGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: KSLSAMIIDAPP*MPKMGTKVWEE
Trigger: CTCCTCCCACACCTTCGTCCCCATCTTGGGCATTCATGGGGGCGCATCTATGATCATGGCTGACAAGGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637334.1
CDS GCA 72 bp GGTAGACGTCGGATCCTTGTCAGCCATGATCATAGATaGGCCCCCATGAATGCCCAAGATGGGGACGAAGGT +
Preference number: 6 (lower is better)
Translates to: GRRRILVSHDHR*APMNAQDGDEG
Trigger: ACCTTCGTCCCCATCTTGGGCATTCATGGGGGCGCATCTATGATCATGGCTGACAAGGATCCGACGTCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675189.1
ENST00000675398.1
CDS CCA 72 bp ATGACCGTGGCTTGCTGCTGGATGGACGCTCCAAACTaGAAGAAGGTAGACGTCGGATCCTTGTCAGCCATG +
Preference number: 6 (lower is better)
Translates to: MTVACCWMDAPN*KKVDVGSLSAM
Trigger: CATGGCTGACAAGGATCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCATCCAGCAGCAAGCCACGGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000562109.5
ENST00000675189.1
ENST00000675398.1
CDS CCA 72 bp ATGACCGTGGCTTGCTGCTGGATGGACGCTCCAAACTaGAAGAAGGTAGACGTCGGATCATGGGTGTCCCTT +
Preference number: 6 (lower is better)
Translates to: MTVACCWMDAPN*KKVDVGSWVSL
Trigger: AAGGGACACCCATGATCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCATCCAGCAGCAAGCCACGGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566670.2
CDS CCA 72 bp ATGACCGTGGCTTGCTGCTGGATGGACGCTCCAAACTaGAAGAAGGTAGACGTCGGATCCTTGTTTGGGGAC +
Preference number: 6 (lower is better)
Translates to: MTVACCWMDAPN*KKVDVGSLFGD
Trigger: GTCCCCAAACAAGGATCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCATCCAGCAGCAAGCCACGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674742.1
CDS GCA 72 bp AGTTTCCGGCCTTACCTTGTCAGCCATGATCATAGATaGGCCCCCATGAATGCCCAAGATGGGGACGAAGGT +
Preference number: 6 (lower is better)
Translates to: SFRPYLVSHDHR*APMNAQDGDEG
Trigger: ACCTTCGTCCCCATCTTGGGCATTCATGGGGGCGCATCTATGATCATGGCTGACAAGGTAAGGCCGGAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566665.1
ENST00000676032.1
CDS GCA 72 bp AGCTCTCAGCAAGTCCTTGTCAGCCATGATCATAGATaGGCCCCCATGAATGCCCAAGATGGGGACGAAGGT +
Preference number: 6 (lower is better)
Translates to: SSQQVLVSHDHR*APMNAQDGDEG
Trigger: ACCTTCGTCCCCATCTTGGGCATTCATGGGGGCGCATCTATGATCATGGCTGACAAGGACTTGCTGAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637334.1
CDS TCA 72 bp CATCTCACCTGGACAGATCACAACATTCACAGGCAGTaGGGACCAGAACATGCACTTTGGGGCAGACGCTTC +
Preference number: 6 (lower is better)
Translates to: HLTWTDHNIHRQ*GPEHALWGRRF
Trigger: GAAGCGTCTGCCCCAAAGTGCATGTTCTGGTCCTCACTGCCTGTGAATGTTGTGATCTGTCCAGGTGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463531.1
CDS CCA 72 bp AAGGAGAGCCTTTCTGAAGGGCAATTCCATAACCGGTaGTGGCAAAGATGTACCCACTCCCGATGGTCACCA +
Preference number: 6 (lower is better)
Translates to: KESLSEGQFHNR*WQRCTHSRWSP
Trigger: TGGTGACCATCGGGAGTGGGTACATCTTTGCCACCACCGGTTATGGAATTGCCCTTCAGAAAGGCTCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000535259.6
ENST00000562109.5
ENST00000636273.2
ENST00000674742.1
ENST00000675398.1
CDS CAA 72 bp CAACATTCACAGGCAGTGAGGACCAGAACATGCACTTaGGGGCAGACGCTTCTGGGTTTGGAACAGACGATG +
Preference number: 6 (lower is better)
Translates to: QHSQAVRTRTCT*GQTLLGLEQTM
Trigger: CATCGTCTGTTCCAAACCCAGAAGCGTCTGCCCCAAAGTGCATGTTCTGGTCCTCACTGCCTGTGAATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463531.1
CDS CAA 90 bp GACAGATCACAACATTCACAGGCAGTGAGGACCAGAACATGCACTTaGGGGCAGACGCTTCTGGGTTTGGAACAGACGATGTGCAACTCA +
Preference number: 6 (lower is better)
Translates to: DRSQHSQAVRTRTCT*GQTLLGLEQTMCNS
Trigger: TGAGTTGCACATCGTCTGTTCCAAACCCAGAAGCGTCTGCCCCAAAGTGCATGTTCTGGTCCTCACTGCCTGTGAATGTTGTGATCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463531.1
CDS CAA 90 bp CCATTTTCAGAAACAAGGCAAAAGGCATTTCCATTCATTTCTGGGTaGGAGAGGCAAGACCTGGTTCTCACCAGGGCCAGTGGCCACGAC +
Preference number: 6 (lower is better)
Translates to: PFSETRQKAFPFISG*ERQDLVLTRASGHD
Trigger: GTCGTGGCCACTGGCCCTGGTGAGAACCAGGTCTTGCCTCTCCAACCCAGAAATGAATGGAAATGCCTTTTGCCTTGTTTCTGAAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566665.1
CDS CCA 72 bp TTTTTCGGATTCTACATATCAGCCTCTGACCACCTCTaGCACTCGGCTTCCTTAGAATGTGCAGCTGGGGGA +
Preference number: 6 (lower is better)
Translates to: FFGFYISASDHL*HSASLECAAGG
Trigger: TCCCCCAGCTGCACATTCTAAGGAAGCCGAGTGCCAGAGGTGGTCAGAGGCTGATATGTAGAATCCGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568247.3
CDS CCA 72 bp GACGCTCCAAACTGGAAGAAGGTAGACGTCGGATCATaGGTGTCCCTTCACTTCAAATGTCAGCACAAGAGG +
Preference number: 6 (lower is better)
Translates to: DAPNWKKVDVGS*VSLHFKCQHKR
Trigger: CCTCTTGTGCTGACATTTGAAGTGAAGGGACACCCATGATCCGACGTCTACCTTCTTCCAGTTTGGAGCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566670.2
CDS GCA 72 bp CGATCACTTTCATGCTGGCCACATTTAGCTTCCGTTTaGCAGGATAAAGCTCTCAGCAAGTCCTTGTCAGCC +
Preference number: 6 (lower is better)
Translates to: RSLSCWPHLASV*QDKALSKSLSA
Trigger: GGCTGACAAGGACTTGCTGAGAGCTTTATCCTGGCAAACGGAAGCTAAATGTGGCCAGCATGAAAGTGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637334.1
CDS CCA 72 bp TCTCTCCCCATGCTCACTGCTCTTCCAGTGCTGCTCTaGACATCGATGGAATATTTTGGAAACATCCTTGGC +
Preference number: 6 (lower is better)
Translates to: SLPMLTALPVLL*TSMEYFGNILG
Trigger: GCCAAGGATGTTTCCAAAATATTCCATCGATGTCCAGAGCAGCACTGGAAGAGCAGTGAGCATGGGGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568247.3
CDS CAA 72 bp GAAACAAGGCAAAAGGCATTTCCATTCATTTCTGGGTaGGAGAGGCAAGACCTGGTTCTCACCAGGGCCAGT +
Preference number: 6 (lower is better)
Translates to: ETRQKAFPFISG*ERQDLVLTRAS
Trigger: ACTGGCCCTGGTGAGAACCAGGTCTTGCCTCTCCAACCCAGAAATGAATGGAAATGCCTTTTGCCTTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566665.1
CDS TCA 72 bp GGGAGAGGAACAGATTTCATACACCCACTTTGGTTCTaGAGCAAAAGCACTTCTCTCCCCATGCTCACTGCT +
Preference number: 6 (lower is better)
Translates to: GRGTDFIHPLWF*SKSTSLPMLTA
Trigger: AGCAGTGAGCATGGGGAGAGAAGTGCTTTTGCTTCAGAACCAAAGTGGGTGTATGAAATCTGTTCCTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568247.3
CDS TCA 72 bp TCAGCCTGTATTTTTCGGATTCTACATATCAGCCTCTaGCCACCTCTGGCACTCGGCTTCCTTAGAATGTGC +
Preference number: 6 (lower is better)
Translates to: SACIFRILHISL*PPLALGFLRMC
Trigger: GCACATTCTAAGGAAGCCGAGTGCCAGAGGTGGTCAGAGGCTGATATGTAGAATCCGAAAAATACAGGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568247.3
CDS CCA 72 bp ATGACCGTGGCTTGCTGCTGGATGGACGCTCCAAACTaGAAGAAGGTAGACGTCGGATCCTTAAGAAAATTA +
Preference number: 6 (lower is better)
Translates to: MTVACCWMDAPN*KKVDVGSLRKL
Trigger: TAATTTTCTTAAGGATCCGACGTCTACCTTCTTCCAGTTTGGAGCGTCCATCCAGCAGCAAGCCACGGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461292.3
CDS CCA 72 bp TTCAGAAACAAGGCAAAAGGCATTTCCATTCATTTCTaGGTTGGAGAGGCAAGACCTGGTTCTCACCAGGGC +
Preference number: 6 (lower is better)
Translates to: FRNKAKGISIHF*VGEARPGSHQG
Trigger: GCCCTGGTGAGAACCAGGTCTTGCCTCTCCAACCCAGAAATGAATGGAAATGCCTTTTGCCTTGTTTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566665.1
CDS CAA 72 bp GTGGTCCCTTTAGGATTCTGGACAGGCACGGAGTTATaGAACACCAGGCCCCAAAGAAGCCATATAGCTTTT +
Preference number: 6 (lower is better)
Translates to: VVPLGFWTGTEL*NTRPQRSHIAF
Trigger: AAAAGCTATATGGCTTCTTTGGGGCCTGGTGTTCAATAACTCCGTGCCTGTCCAGAATCCTAAAGGGACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000535259.6
ENST00000562109.5
ENST00000636273.2
ENST00000674742.1
ENST00000675398.1
CDS CAA 72 bp CAGCCACACTGCTTCCTGCCACATTCATTCACTTGCTaGTCCATTTGCCGTCTCTGTCCTTATACAGAAACG +
Preference number: 6 (lower is better)
Translates to: QPHCFLPHSFTC*SICRLCPYTET
Trigger: CGTTTCTGTATAAGGACAGAGACGGCAAATGGACAAGCAAGTGAATGAATGTGGCAGGAAGCAGTGTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566670.2
ENST00000566683.1
CDS CAA 90 bp ATTTCTTCCCAGCCACACTGCTTCCTGCCACATTCATTCACTTGCTaGTCCATTTGCCGTCTCTGTCCTTATACAGAAACGTCATCTCTC +
Preference number: 6 (lower is better)
Translates to: ISSQPHCFLPHSFTC*SICRLCPYTETSSL
Trigger: GAGAGATGACGTTTCTGTATAAGGACAGAGACGGCAAATGGACAAGCAAGTGAATGAATGTGGCAGGAAGCAGTGTGGCTGGGAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566670.2
ENST00000566683.1
CDS GCA 72 bp TTGGGGCAGACGCTTCTGGGTTTGGAACAGACGATGTaGAACTCACAGCTATGTAACCTTAAGACAAGTTTC +
Preference number: 6 (lower is better)
Translates to: LGQTLLGLEQTM*NSQLCNLKTSF
Trigger: GAAACTTGTCTTAAGGTTACATAGCTGTGAGTTGCACATCGTCTGTTCCAAACCCAGAAGCGTCTGCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463531.1
CDS GCA 72 bp CCCTTCACTTCAAATGTCAGCACAAGAGGTTTTTCCTaGCTAAATGGCAGCCAATATGCTCTAGTCTCTCGC +
Preference number: 6 (lower is better)
Translates to: PFTSNVSTRGFS*LNGSQYALVSR
Trigger: GCGAGAGACTAGAGCATATTGGCTGCCATTTAGGCAGGAAAAACCTCTTGTGCTGACATTTGAAGTGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566670.2
ENST00000566683.1
CDS CCA 72 bp GCTCTGGACATCGATGGAATATTTTGGAAACATCCTTaGCTTCTGATGATGGAAGGGGAACCCAGTGAGACA +
Preference number: 6 (lower is better)
Translates to: ALDIDGIFWKHP*LLMMEGEPSET
Trigger: TGTCTCACTGGGTTCCCCTTCCATCATCAGAAGCCAAGGATGTTTCCAAAATATTCCATCGATGTCCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568247.3
CDS CAA 72 bp TCAGTGAAGGATAAGTCTTTGCCATCCCATGTAACATaGACCATAAATGGGTGCAAGGTGTGCATCGGGACC +
Preference number: 6 (lower is better)
Translates to: SVKDKSLPSHVT*TINGCKVCIGT
Trigger: GGTCCCGATGCACACCTTGCACCCATTTATGGTCAATGTTACATGGGATGGCAAAGACTTATCCTTCACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000535259.6
ENST00000562109.5
ENST00000636273.2
ENST00000674742.1
ENST00000675189.1
ENST00000675398.1
CDS CAA 72 bp CTCTTCCAGTGCTGCTCTGGACATCGATGGAATATTTaGGAAACATCCTTGGCTTCTGATGATGGAAGGGGA +
Preference number: 6 (lower is better)
Translates to: LFQCCSGHRWNI*ETSLASDDGRG
Trigger: TCCCCTTCCATCATCAGAAGCCAAGGATGTTTCCAAAATATTCCATCGATGTCCAGAGCAGCACTGGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568247.3
CDS CAA 90 bp AAGTATTTCTTCCCAGCCACACTGCTTCCTGCCACATTCATTCACTaGCTTGTCCATTTGCCGTCTCTGTCCTTATACAGAAACGTCATC +
Preference number: 6 (lower is better)
Translates to: KYFFPATLLPATFIH*LVHLPSLSLYRNVI
Trigger: GATGACGTTTCTGTATAAGGACAGAGACGGCAAATGGACAAGCAAGTGAATGAATGTGGCAGGAAGCAGTGTGGCTGGGAAGAAATACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566670.2
ENST00000566683.1
CDS GCA 72 bp TGCTTCCTGCCACATTCATTCACTTGCTTGTCCATTTaGCGTCTCTGTCCTTATACAGAAACGTCATCTCTC +
Preference number: 6 (lower is better)
Translates to: CFLPHSFTCLSI*RLCPYTETSSL
Trigger: GAGAGATGACGTTTCTGTATAAGGACAGAGACGGCAAATGGACAAGCAAGTGAATGAATGTGGCAGGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566670.2
ENST00000566683.1
CDS CCA 72 bp CGTGCTTCCATTAGGCACTGTCCCAAATCGAAAAGGTaGGGAATAGTCATGAGGTCTCTGAAACTTTTTGTC +
Preference number: 6 (lower is better)
Translates to: RASIRHCPKSKR*GIVMRSLKLFV
Trigger: GACAAAAAGTTTCAGAGACCTCATGACTATTCCCCACCTTTTCGATTTGGGACAGTGCCTAATGGAAGCACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000535259.6
ENST00000562109.5
ENST00000636273.2
ENST00000674742.1
ENST00000675398.1
CDS CCA 72 bp TCTTCCAGTGCTGCTCTGGACATCGATGGAATATTTTaGAAACATCCTTGGCTTCTGATGATGGAAGGGGAA +
Preference number: 6 (lower is better)
Translates to: SSSAALDIDGIF*KHPWLLMMEGE
Trigger: TTCCCCTTCCATCATCAGAAGCCAAGGATGTTTCCAAAATATTCCATCGATGTCCAGAGCAGCACTGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568247.3
CDS CCA 72 bp TTCAAATGTCAGCACAAGAGGTTTTTCCTGCCTAAATaGCAGCCAATATGCTCTAGTCTCTCGCCCTGCTTT +
Preference number: 6 (lower is better)
Translates to: FKCQHKRFFLPK*QPICSSLSPCF
Trigger: AAAGCAGGGCGAGAGACTAGAGCATATTGGCTGCCATTTAGGCAGGAAAAACCTCTTGTGCTGACATTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566670.2
ENST00000566683.1
CDS CAA 72 bp CAAGATGACAGAAGAGTGGATCTTCTTCAGCTGGACTaGTGTCTTTGCATCCTCAAAGGAAGTGTCCAGTGT +
Preference number: 6 (lower is better)
Translates to: QDDRRVDLLQLD*CLCILKGSVQC
Trigger: ACACTGGACACTTCCTTTGAGGATGCAAAGACACAAGTCCAGCTGAAGAAGATCCACTCTTCTGTCATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000535259.6
ENST00000562109.5
ENST00000566670.2
ENST00000568247.3
ENST00000636273.2
ENST00000637393.1
ENST00000674742.1
ENST00000675189.1
ENST00000675398.1
CDS CAA 72 bp TGGTCCTCAAGCTTAGAAGCTGTTATGAGGAAGACGTaGGGGCTTTTCAGAATAACATCCGAAGATTACCCC +
Preference number: 6 (lower is better)
Translates to: WSSSLEAVMRKT*GLFRITSEDYP
Trigger: GGGGTAATCTTCGGATGTTATTCTGAAAAGCCCCAACGTCTTCCTCATAACAGCTTCTAAGCTTGAGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674742.1
CDS CAA 90 bp ACAGTAGAGCAAGATGACAGAAGAGTGGATCTTCTTCAGCTGGACTaGTGTCTTTGCATCCTCAAAGGAAGTGTCCAGTGTGATCACATT +
Preference number: 6 (lower is better)
Translates to: TVEQDDRRVDLLQLD*CLCILKGSVQCDHI
Trigger: AATGTGATCACACTGGACACTTCCTTTGAGGATGCAAAGACACAAGTCCAGCTGAAGAAGATCCACTCTTCTGTCATCTTGCTCTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000535259.6
ENST00000562109.5
ENST00000566670.2
ENST00000568247.3
ENST00000636273.2
ENST00000637393.1
ENST00000674742.1
ENST00000675189.1
ENST00000675398.1
CDS CCA 72 bp TCCTTGTTTGGGGACACCTTTTTAGAGGATAACTCTTaGTCCTCAAGCTTAGAAGCTGTTATGAGGAAGACG +
Preference number: 6 (lower is better)
Translates to: SLFGDTFLEDNS*SSSLEAVMRKT
Trigger: CGTCTTCCTCATAACAGCTTCTAAGCTTGAGGACCAAGAGTTATCCTCTAAAAAGGTGTCCCCAAACAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674742.1
CDS TCA 72 bp GGAGTTTTAACATGTTGCTCTGGGATCCCGTCAGATTaGAGTCTGGAGACTTCTTCTTTTCTTCAATGTGCA +
Preference number: 6 (lower is better)
Translates to: GVLTCCSGIPSD*SLETSSFLQCA
Trigger: TGCACATTGAAGAAAAGAAGAAGTCTCCAGACTTCAATCTGACGGGATCCCAGAGCAACATGTTAAAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000463531.1
ENST00000535259.6
ENST00000562109.5
ENST00000636273.2
ENST00000674742.1
ENST00000675398.1
CDS CAA 72 bp CTGGAAAGCTTCTTCAGAATATCAATGCAGAACCCCTaGCAGCATTTCTTCACATTCATCCCCTCATTGGTT +
Preference number: 6 (lower is better)
Translates to: LESFFRISMQNP*QHFFTFIPSLV
Trigger: AACCAATGAGGGGATGAATGTGAAGAAATGCTGCAAGGGGTTCTGCATTGATATTCTGAAGAAGCTTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000535259.6
ENST00000562109.5
ENST00000636273.2
ENST00000674742.1
ENST00000675189.1
ENST00000675398.1
CDS CAA 72 bp AGGAGTTTTAACATGTTGCTCTGGGATCCCGTCAGATaGAAGTCTGGAGACTTCTTCTTTTCTTCAATGTGC +
Preference number: 6 (lower is better)
Translates to: RSFNMLLWDPVR*KSGDFFFSSMC
Trigger: GCACATTGAAGAAAAGAAGAAGTCTCCAGACTTCAATCTGACGGGATCCCAGAGCAACATGTTAAAACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000330684.4
ENST00000396573.6
ENST00000461292.3
ENST00000463531.1
ENST00000535259.6
ENST00000562109.5
ENST00000636273.2
ENST00000674742.1
ENST00000675398.1
CDS TCA 72 bp TCCATCACATTAAAGTGCTCTGCTTTTTGGGGGATATaGGACTTCAAGTTCCATCCTCTACCATATCAAGTC +
Preference number: 6 (lower is better)
Translates to: SITLKCSAFWGI*DFKFHPLPYQV
Trigger: GACTTGATATGGTAGAGGATGGAACTTGAAGTCTCATATCCCCCAAAAAGCAGAGCACTTTAATGTGATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675189.1
CDS TCA 72 bp ATAAAATTGTATGTCACCCTTCAGGTCCTAGCTCAATaGACATCCTTTCCCATTGGACCATCTTATCTAACG +
Preference number: 6 (lower is better)
Translates to: IKLYVTLQVLAQ*TSFPIGPSYLT
Trigger: CGTTAGATAAGATGGTCCAATGGGAAAGGATGTTCATTGAGCTAGGACCTGAAGGGTGACATACAATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675189.1
CDS CAA 90 bp GATATGAGACTTCAAGTTCCATCCTCTACCATATCAAGTCATTTTTaGGGAAAGAGATTTGGTCCTGACACTTTTCTGATAACACCCATT +
Preference number: 6 (lower is better)
Translates to: DMRLQVPSSTISSHF*GKRFGPDTFLITPI
Trigger: AATGGGTGTTATCAGAAAAGTGTCAGGACCAAATCTCTTTCCCAAAAAATGACTTGATATGGTAGAGGATGGAACTTGAAGTCTCATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675189.1
CDS TCA 72 bp GCTAACGAATGCCTCCCAATTTTATTTCCTATCTACTaGTTGTCCCTTTATCAACTACAATGCACTAAGATC +
Preference number: 6 (lower is better)
Translates to: ANECLPILFPIY*LSLYQLQCTKI
Trigger: GATCTTAGTGCATTGTAGTTGATAAAGGGACAATCAGTAGATAGGAAATAAAATTGGGAGGCATTCGTTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675189.1
CDS TCA 72 bp ATCAGAAAATGTGTAAATTCACAACAGCACAAGCCCTaGTTATGCAAATATAAGGAACTACTGTATCACAGT +
Preference number: 6 (lower is better)
Translates to: IRKCVNSQQHKP*LCKYKELLYHS
Trigger: ACTGTGATACAGTAGTTCCTTATATTTGCATAATCAGGGCTTGTGCTGTTGTGAATTTACACATTTTCTGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675189.1