RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRIN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000176884

Ensembl transcript IDs: ENST00000350902.9, ENST00000371546.8, ENST00000371550.8, ENST00000371553.7, ENST00000371555.8, ENST00000371559.8, ENST00000371560.4, ENST00000371561.8, ENST00000462584.1, ENST00000471122.5, ENST00000473811.1, ENST00000485413.1, ENST00000675064.1, ENST00000675295.1, ENST00000675885.1, ENST00000676396.1

Found 1753 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCGGGGTaGGCGGGCGGACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGG +
Preference number: 1 (lower is better)
Translates to: GPHLGPAGAARQAAG*AGGRTGGPGWAVSG
Trigger: CCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTCCGCCCGCCCACCCCGCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR CCA 90 bp TGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTaGGGACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGG +
Preference number: 1 (lower is better)
Translates to: CIHREVGVGRCAPAP*GRRGRARLRTGRTG
Trigger: CCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGTCCCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR GCA 90 bp TCAGAGACCCCAGGGCCCTGCCTCTGCCGGAGCGCCCTGCGGCCCTaGCCAGCCGACTCAGCTCTGCCCCGTCCTCAGCCGCTCCGGTCC +
Preference number: 1 (lower is better)
Translates to: SETPGPCLCRSALRP*PADSALPRPQPLRS
Trigger: GGACCGGAGCGGCTGAGGACGGGGCAGAGCTGAGTCGGCTGGGCAGGGCCGCAGGGCGCTCCGGCAGAGGCAGGGCCCTGGGGTCTCTGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR GCA 90 bp GAGCGAGGGCGGGGGCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTaGAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACC +
Preference number: 1 (lower is better)
Translates to: ERGRGRAGGALPCPR*RAGLKTVPSQRPGT
Trigger: GGTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGCCCCCGCCCTCGCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR CCA 90 bp CGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGGGCCCTaGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCC +
Preference number: 1 (lower is better)
Translates to: RGCARAARGRHALGP*ECWFCTRWRAGHAP
Trigger: GGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR GCA 90 bp GGCCGCTGCCCAGCCTGGCCGGCCACTTGGGCCCTCGCTCCTGCCTaGCTCCCTGTGCTGGACAGACGGGCCGACAGCGGACGTTCGAGG +
Preference number: 1 (lower is better)
Translates to: GRCPAWPATWALAPA*LPVLDRRADSGRSR
Trigger: CCTCGAACGTCCGCTGTCGGCCCGTCTGTCCAGCACAGGGAGGCAGGCAGGAGCGAGGGCCCAAGTGGCCGGCCAGGCTGGGCAGCGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 90 bp AGTCCTGCCCACCAGAGCCAGAGCCAGTGCCACGGCCTTCGGGGATaGAGGAGGGCCGTGGCCAGGCCGGGCCCTGGGCACCAGGCCTCG +
Preference number: 1 (lower is better)
Translates to: SPAHQSQSQCHGLRG*RRAVARPGPGHQAS
Trigger: CGAGGCCTGGTGCCCAGGGCCCGGCCTGGCCACGGCCCTCCTCCATCCCCGAAGGCCGTGGCACTGGCTCTGGCTCTGGTGGGCAGGACT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 90 bp CATGGGCCGCTGCCCAGCCTGGCCGGCCACTTGGGCCCTCGCTCCTaGCTGCCTCCCTGTGCTGGACAGACGGGCCGACAGCGGACGTTC +
Preference number: 1 (lower is better)
Translates to: HGPLPSLAGHLGPRS*LPPCAGQTGRQRTF
Trigger: GAACGTCCGCTGTCGGCCCGTCTGTCCAGCACAGGGAGGCAGGCAGGAGCGAGGGCCCAAGTGGCCGGCCAGGCTGGGCAGCGGCCCATG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 90 bp GGTACCGGCGGGCGACTCTGGAGACAGAGGGGCCAGGCGGAGGCTTaGAGCAGGGTGCGTGGCCTCCCTCGGCCCCGGCTTTGCAGTGGG +
Preference number: 1 (lower is better)
Translates to: GTGGRLWRQRGQAEA*SRVRGLPRPRLCSG
Trigger: CCCACTGCAAAGCCGGGGCCGAGGGAGGCCACGCACCCTGCTCCAAGCCTCCGCCTGGCCCCTCTGTCTCCAGAGTCGCCCGCCGGTACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 90 bp GGCGACTCTGGAGACAGAGGGGCCAGGCGGAGGCTTGGAGCAGGGTaGGTGGCCTCCCTCGGCCCCGGCTTTGCAGTGGGCAGCCACCTG +
Preference number: 1 (lower is better)
Translates to: GDSGDRGARRRLGAG*VASLGPGFAVGSHL
Trigger: CAGGTGGCTGCCCACTGCAAAGCCGGGGCCGAGGGAGGCCACGCACCCTGCTCCAAGCCTCCGCCTGGCCCCTCTGTCTCCAGAGTCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 90 bp AGATGGCTAGGGTGGTGGCCACACCTGCCCTCGCCTGCTCCTGCATaGGCCGCTGCCCAGCCTGGCCGGCCACTTGGGCCCTCGCTCCTG +
Preference number: 1 (lower is better)
Translates to: RWLGWWPHLPSPAPA*AAAQPGRPLGPSLL
Trigger: CAGGAGCGAGGGCCCAAGTGGCCGGCCAGGCTGGGCAGCGGCCCATGCAGGAGCAGGCGAGGGCAGGTGTGGCCACCACCCTAGCCATCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 90 bp GGGCGGACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTaGGCTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTC +
Preference number: 1 (lower is better)
Translates to: GRTDGRPRVGSLWGG*ASLRPSRAAGPISV
Trigger: GACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTCCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR GCA 90 bp GGCCGGGCCCTGGGCACCAGGCCTCGGAGGGTGGCCTGCCCTACCTaGAGGTTCTTCCGCCACACGTTAACGGCGGCAAAGGCCAGCTGC +
Preference number: 1 (lower is better)
Translates to: GRALGTRPRRVACPT*RFFRHTLTAAKASC
Trigger: GCAGCTGGCCTTTGCCGCCGTTAACGTGTGGCGGAAGAACCTGCAGGTAGGGCAGGCCACCCTCCGAGGCCTGGTGCCCAGGGCCCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 90 bp ACTCTGGAGACAGAGGGGCCAGGCGGAGGCTTGGAGCAGGGTGCGTaGCCTCCCTCGGCCCCGGCTTTGCAGTGGGCAGCCACCTGCAGG +
Preference number: 1 (lower is better)
Translates to: TLETEGPGGGLEQGA*PPSAPALQWAATCR
Trigger: CCTGCAGGTGGCTGCCCACTGCAAAGCCGGGGCCGAGGGAGGCCACGCACCCTGCTCCAAGCCTCCGCCTGGCCCCTCTGTCTCCAGAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 90 bp CCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTaGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACC +
Preference number: 1 (lower is better)
Translates to: PSRAAGPISVLGRAN*AGGRLRGPHTTVLT
Trigger: GGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR TCA 90 bp CTGGGTGGCCCTGGCTTACAGGCGTCCCGAGGAGGAGGAGTCCTCTaGGGACTGGAGGAGTTGCCCCTCAGGCCACACCAGCTGTCTGCG +
Preference number: 1 (lower is better)
Translates to: LGGPGLQASRGGGVL*GLEELPLRPHQLSA
Trigger: CGCAGACAGCTGGTGTGGCCTGAGGGGCAACTCCTCCAGTCCTCAGAGGACTCCTCCTCCTCGGGACGCCTGTAAGCCAGGGCCACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 90 bp CAGGCGGGCCCCTGTCTTACCCTGCCTGATTGCCTTCCTATGGAATaGGTACCGGCGGGCGACTCTGGAGACAGAGGGGCCAGGCGGAGG +
Preference number: 1 (lower is better)
Translates to: QAGPCLTLPDCLPME*VPAGDSGDRGARRR
Trigger: CCTCCGCCTGGCCCCTCTGTCTCCAGAGTCGCCCGCCGGTACCCATTCCATAGGAAGGCAATCAGGCAGGGTAAGACAGGGGCCCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 90 bp GCCCTGGCTTACAGGCGTCCCGAGGAGGAGGAGTCCTCTGAGGACTaGAGGAGTTGCCCCTCAGGCCACACCAGCTGTCTGCGTGGAGGC +
Preference number: 1 (lower is better)
Translates to: ALAYRRPEEEESSED*RSCPSGHTSCLRGG
Trigger: GCCTCCACGCAGACAGCTGGTGTGGCCTGAGGGGCAACTCCTCCAGTCCTCAGAGGACTCCTCCTCCTCGGGACGCCTGTAAGCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR TCA 90 bp TGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTaGGAGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTG +
Preference number: 1 (lower is better)
Translates to: WAPPGASHHGADRGI*EVERARDISGMVLL
Trigger: CAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR GCA 90 bp GAGCAGGACGCCCCAGGAGAACCACATGGCCGAGGACAGGGTCAGTaGGTCCTCCTCCTCCTCCTCGCTGTTCACCTTGAACCGGCCGAA +
Preference number: 1 (lower is better)
Translates to: EQDAPGEPHGRGQGQ*VLLLLLAVHLEPAE
Trigger: TTCGGCCGGTTCAAGGTGAACAGCGAGGAGGAGGAGGAGGACGCACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGGGCGTCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 90 bp ATACACAGGCGGGCCCCTGTCTTACCCTGCCTGATTGCCTTCCTATaGAATGGGTACCGGCGGGCGACTCTGGAGACAGAGGGGCCAGGC +
Preference number: 1 (lower is better)
Translates to: IHRRAPVLPCLIAFL*NGYRRATLETEGPG
Trigger: GCCTGGCCCCTCTGTCTCCAGAGTCGCCCGCCGGTACCCATTCCATAGGAAGGCAATCAGGCAGGGTAAGACAGGGGCCCGCCTGTGTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 90 bp CCCGAGCGGAAAAACAGCTCTCCAGTCGTCACCAGGTCGCACTTCTaGGAGGCCTCGAACTCCAGCACCGCCGAGTCCCAGATGAAGGCA +
Preference number: 1 (lower is better)
Translates to: PERKNSSPVVTRSHF*EASNSSTAESQMKA
Trigger: TGCCTTCATCTGGGACTCGGCGGTGCTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGTGACGACTGGAGAGCTGTTTTTCCGCTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR TCA 90 bp TGGACTCACGTGCCATACACAGGCGGGCCCCTGTCTTACCCTGCCTaGTTGCCTTCCTATGGAATGGGTACCGGCGGGCGACTCTGGAGA +
Preference number: 1 (lower is better)
Translates to: WTHVPYTGGPLSYPA*LPSYGMGTGGRLWR
Trigger: TCTCCAGAGTCGCCCGCCGGTACCCATTCCATAGGAAGGCAATCAGGCAGGGTAAGACAGGGGCCCGCCTGTGTATGGCACGTGAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 90 bp CTCACGTGCCATACACAGGCGGGCCCCTGTCTTACCCTGCCTGATTaGCTTCCTATGGAATGGGTACCGGCGGGCGACTCTGGAGACAGA +
Preference number: 1 (lower is better)
Translates to: LTCHTQAGPCLTLPD*LPMEWVPAGDSGDR
Trigger: TCTGTCTCCAGAGTCGCCCGCCGGTACCCATTCCATAGGAAGGCAATCAGGCAGGGTAAGACAGGGGCCCGCCTGTGTATGGCACGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 90 bp GCCCGGCGACGTGTCGTTGGGCCCGGTGCAGATCACCTTCTTGACTaGGTCGCCGTTGACTGTGAACTCCTCCTTGCATGTCCCATCACT +
Preference number: 1 (lower is better)
Translates to: ARRRVVGPGADHLLD*VAVDCELLLACPIT
Trigger: AGTGATGGGACATGCAAGGAGGAGTTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCACCGGGCCCAACGACACGTCGCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 90 bp GCGCGCTCGTTGTTTATGGTTAGCGGCGCCACGATCATGTCTGCCTaGCCGCTGAGCAGCTCGCCCATCATCCCATTCCACTCCTTCTTG +
Preference number: 1 (lower is better)
Translates to: ARSLFMVSGATIMSA*PLSSSPIIPFHSFL
Trigger: CAAGAAGGAGTGGAATGGGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCGCCGCTAACCATAAACAACGAGCGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 90 bp ATCTTGGACTCACGTGCCATACACAGGCGGGCCCCTGTCTTACCCTaGCTGATTGCCTTCCTATGGAATGGGTACCGGCGGGCGACTCTG +
Preference number: 1 (lower is better)
Translates to: ILDSRAIHRRAPVLP*LIAFLWNGYRRATL
Trigger: CAGAGTCGCCCGCCGGTACCCATTCCATAGGAAGGCAATCAGGCAGGGTAAGACAGGGGCCCGCCTGTGTATGGCACGTGAGTCCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 90 bp CCTCCGCCGCACTCTCGTAGTTGTGCTTCTCCATATGCCGGTACATaGTGCTCAGCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGC +
Preference number: 1 (lower is better)
Translates to: PPPHSRSCASPYAGT*CSAPPGAGSRYPRS
Trigger: GCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGCTGAGCACCATGTACCGGCATATGGAGAAGCACAACTACGAGAGTGCGGCGGAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 90 bp GGCCGTGGCTGCCCTTGCTGGTGGCAAATTCTCATGGATACAACCTaGGCACCAGGCAGGACCGGACCTGGCCCAATTCGGATTAGAGTC +
Preference number: 1 (lower is better)
Translates to: GRGCPCWWQILMDTT*APGRTGPGPIRIRV
Trigger: GACTCTAATCCGAATTGGGCCAGGTCCGGTCCTGCCTGGTGCCCAGGTTGTATCCATGAGAATTTGCCACCAGCAAGGGCAGCCACGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 90 bp CCGCCGCACTCTCGTAGTTGTGCTTCTCCATATGCCGGTACATGGTaGTCAGCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCT +
Preference number: 1 (lower is better)
Translates to: PPHSRSCASPYAGTW*SAPPGAGSRYPRSS
Trigger: AGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGCTGAGCACCATGTACCGGCATATGGAGAAGCACAACTACGAGAGTGCGGCGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 90 bp CTTGTTGCTGTTGTTCACCCGCTCCTGTGTGCCGAACTTGCCATCTaGCACCAGGTGCACCTCGTAGGTGAAGTTCATGGTCCGTGCCAG +
Preference number: 1 (lower is better)
Translates to: LVAVVHPLLCAELAI*HQVHLVGEVHGPCQ
Trigger: CTGGCACGGACCATGAACTTCACCTACGAGGTGCACCTGGTGGCAGATGGCAAGTTCGGCACACAGGAGCGGGTGAACAACAGCAACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 90 bp ATGAAGCCATTCTCGTGGGACTTGAGGATGGACAGGGAGACGTTCTaGTTCCAGGGGCTGTCTTTGCGCATGCCTATGCCGAAGCCCGAG +
Preference number: 1 (lower is better)
Translates to: MKPFSWDLRMDRETF*FQGLSLRMPMPKPE
Trigger: CTCGGGCTTCGGCATAGGCATGCGCAAAGACAGCCCCTGGAAGCAGAACGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATGGCTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR TCA 90 bp CGTTGTTTATGGTTAGCGGCGCCACGATCATGTCTGCCTGCCCGCTaGGCAGCTCGCCCATCATCCCATTCCACTCCTTCTTGTTGCTGT +
Preference number: 1 (lower is better)
Translates to: RCLWLAAPRSCLPAR*AARPSSHSTPSCCC
Trigger: ACAGCAACAAGAAGGAGTGGAATGGGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCGCCGCTAACCATAAACAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 90 bp GCCATCTGCCACCAGGTGCACCTCGTAGGTGAAGTTCATGGTCCGTaGCAGCTTGATGAGCAGGTCGATGCAAAAGCCGTAGCAACACTG +
Preference number: 1 (lower is better)
Translates to: AICHQVHLVGEVHGP*QLDEQVDAKAVATL
Trigger: CAGTGTTGCTACGGCTTTTGCATCGACCTGCTCATCAAGCTGGCACGGACCATGAACTTCACCTACGAGGTGCACCTGGTGGCAGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 90 bp AGCGTGCTCCGGGGAATCTCCTTCTTGACCAGAATAGTCAGGCCCTaGTACTTGAAGGGCTTGGAAAACTCGATGTACTGCGCGCGCTCG +
Preference number: 1 (lower is better)
Translates to: SVLRGISFLTRIVRP*YLKGLENSMYCARS
Trigger: CGAGCGCGCGCAGTACATCGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCTGGTCAAGAAGGAGATTCCCCGGAGCACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 90 bp TCTGGTGGACATCTGGTACCCTCGAGGCTTCTCTGTCTCTCCGCCTaGCCAGATGATCTTCCTGTCATTAGGGATGACGTGGGTGCCATT +
Preference number: 1 (lower is better)
Translates to: SGGHLVPSRLLCLSA*PDDLPVIRDDVGAI
Trigger: AATGGCACCCACGTCATCCCTAATGACAGGAAGATCATCTGGCCAGGCGGAGAGACAGAGAAGCCTCGAGGGTACCAGATGTCCACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR TCA 90 bp TCAAAAGTAAGGGTCGCAGGGGCGTTGCTGCGCGAGTCACATTCCTaGTACCGAACCCACGTCTTGTCCAGGTCTTCCATGAAGCCATTC +
Preference number: 1 (lower is better)
Translates to: SKVRVAGALLRESHS*YRTHVLSRSSMKPF
Trigger: GAATGGCTTCATGGAAGACCTGGACAAGACGTGGGTTCGGTATCAGGAATGTGACTCGCGCAGCAACGCCCCTGCGACCCTTACTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 90 bp ATAGTCAGGCCCTGGTACTTGAAGGGCTTGGAAAACTCGATGTACTaGGCGCGCTCGTTGTTTATGGTTAGCGGCGCCACGATCATGTCT +
Preference number: 1 (lower is better)
Translates to: IVRPWYLKGLENSMY*ARSLFMVSGATIMS
Trigger: AGACATGATCGTGGCGCCGCTAACCATAAACAACGAGCGCGCGCAGTACATCGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGCGGGGAGGCCCGTTCTaGGCTGCAGGCCGGACGAGG +
Preference number: 2 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSRGGPF*AAGRTR
Trigger: CCTCGTCCGGCCTGCAGCCCAGAACGGGCCTCCCCG...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGTCTGCCGGAGCGCCCTaGGGCCCTGCCCAGCCGACT +
Preference number: 2 (lower is better)
Translates to: EGLSPLESGGGGPRRREASAGAP*GPAQPT
Trigger: AGTCGGCTGGGCAGGGCCGCAGGGCGCTCCGGCAGA...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGGAGACCCCAGGGCCCTaGCTCTGCCGGAGCGCCCTG +
Preference number: 2 (lower is better)
Translates to: EGLSPLESGGGGPRRREAETPGP*LCRSAL
Trigger: CAGGGCGCTCCGGCAGAGGCAGGGCCCTGGGGTCTC...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGGGTGGCGCTCTCCCGTaGCCAAGGTGCAGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSGGALP*PRCRAG
Trigger: CCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACC...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGCTCCGGTCCGCACCTTaGTCCAGCAGGGGCTGCCCG +
Preference number: 2 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSLRSAP*SSRGCP
Trigger: CGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAG...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCTCTGCCGGAGCGCCCTaGGGCCCTGCCCAGCCGACT +
Preference number: 2 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSSAGAP*GPAQPT
Trigger: AGTCGGCTGGGCAGGGCCGCAGGGCGCTCCGGCAGA...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCGAGACCCCAGGGCCCTaGCTCTGCCGGAGCGCCCTG +
Preference number: 2 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSETPGP*LCRSAL
Trigger: CAGGGCGCTCCGGCAGAGGCAGGGCCCTGGGGTCTC...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCGAGACCCCAGGGCCCTaGCTCTGCCGGAGCGCCCTG +
Preference number: 2 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGETPGP*LCRSAL
Trigger: CAGGGCGCTCCGGCAGAGGCAGGGCCCTGGGGTCTC...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGTGGGGCTGCCGTCTCTaGTCCAAGCCCCTCCGCCTG +
Preference number: 2 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSWGCRL*SKPLRL
Trigger: CAGGCGGAGGGGCTTGGAGCAGAGACGGCAGCCCCA...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGGGCGGCGGGAGGCGCTaGCAGCTGGGAAGTCAGGGA +
Preference number: 2 (lower is better)
Translates to: EGLSPLESGGGGPRRREAGGGRR*QLGSQG
Trigger: TCCCTGACTTCCCAGCTGGCAGCGCCTCCCGCCGCC...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGAGGCCCGTTCTGGGCTaGAGGCCGGACGAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSRPVLG*RPDEER
Trigger: CCTCTCCTCGTCCGGCCTGCAGCCCAGAACGGGCCT...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR CAA 90 bp CCTCGCCTGCTCCTGCATGGGCCGCTGCCCAGCCTGGCCGGCCACTaGGGCCCTCGCTCCTGCCTGCCTCCCTGTGCTGGACAGACGGGC +
Preference number: 2 (lower is better)
Translates to: PRLLLHGPLPSLAGH*GPRSCLPPCAGQTG
Trigger: GCCCGTCTGTCCAGCACAGGGAGGCAGGCAGGAGCGAGGGCCCAAGTGGCCGGCCAGGCTGGGCAGCGGCCCATGCAGGAGCAGGCGAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGCAGCCGACTCAGCTCTaGCCCGTCCTCAGCCGCTCC +
Preference number: 2 (lower is better)
Translates to: EGLSPLESGGGGPRRREAQPTQL*PVLSRS
Trigger: GGAGCGGCTGAGGACGGGGCAGAGCTGAGTCGGCTG...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGTCTGCCGGAGCGCCCTaGGGCCCTGCCCAGCCGACT +
Preference number: 2 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQSAGAP*GPAQPT
Trigger: AGTCGGCTGGGCAGGGCCGCAGGGCGCTCCGGCAGA...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCTCTGCCGGAGCGCCCTaGGGCCCTGCCCAGCCGACT +
Preference number: 2 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAASAGAP*GPAQPT
Trigger: AGTCGGCTGGGCAGGGCCGCAGGGCGCTCCGGCAGA...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCGAGACCCCAGGGCCCTaGCTCTGCCGGAGCGCCCTG +
Preference number: 2 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAETPGP*LCRSAL
Trigger: CAGGGCGCTCCGGCAGAGGCAGGGCCCTGGGGTCTC...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGAGGGTGGGCAGTCTCTaGGGCGGGTGGGCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: EGLSPLESGGGGPRRREARVGSL*GGWASL
Trigger: GAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCT...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCTCCGGTCCGCACCTTaGTCCAGCAGGGGCTGCCCG +
Preference number: 2 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARLRSAP*SSRGCP
Trigger: CGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAG...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCCTCCGGTCCGCACCTTaGTCCAGCAGGGGCTGCCCG +
Preference number: 2 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSLRSAP*SSRGCP
Trigger: CGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAG...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCCAAGCCCCTCCGCCTaGGGCCAGTTAGCCCCCGCT +
Preference number: 2 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARPSPSA*GQLAPA
Trigger: AGCGGGGGCTAACTGGCCCCAGGCGGAGGGGCTTGG...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGCAGACGGGGTGTGGGTaGGCGGTGCCGCAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSQTGCG*AVPQEE
Trigger: CTCTTCTTGCGGCACCGCCCACCCACACCCCGTCTG...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR TCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGGGTGCAGGGCAGGGTTaGAGACAGTCCCGAGCCAGC +
Preference number: 2 (lower is better)
Translates to: EGLSPLESGGGGPRRREAGAGQG*RQSRAS
Trigger: GCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACC...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCCGACTCAGCTCTaGCCCGTCCTCAGCCGCTCC +
Preference number: 2 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARQPTQL*PVLSRS
Trigger: GGAGCGGCTGAGGACGGGGCAGAGCTGAGTCGGCTG...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCGAGACCCCAGGGCCCTaGCTCTGCCGGAGCGCCCTG +
Preference number: 2 (lower is better)
Translates to: RARALGVLVLYKVAGRSRETPGP*LCRSAL
Trigger: CAGGGCGCTCCGGCAGAGGCAGGGCCCTGGGGTCTC...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGCGGGAAGGATGGGGCTaGCGTCTCTGCTCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: EGLSPLESGGGGPRRREAREGWG*RLCSKP
Trigger: GGGCTTGGAGCAGAGACGGCAGCCCCATCCTTCCCG...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGTGTGGCTCAGGCTGGTaGTGCGGGAAGGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSCGSGW*CGKDGA
Trigger: AGCCCCATCCTTCCCGCAGCACCAGCCTGAGCCACA...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGGTGGGGGTTGGGCGGTaGGCGCCTGCACCCTGGGGA +
Preference number: 2 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGVGVGR*APAPWG
Trigger: TCCCCAGGGTGCAGGCGCGCACCGCCCAACCCCCAC...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCTTGGCCGGGCTAACTaGGCAGGTGGGCGCCTCCGG +
Preference number: 2 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAALGRAN*AGGRLR
Trigger: CCGGAGGCGCCCACCTGCCCAGTTAGCCCGGCCAAG...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCCTTGGCCGGGCTAACTaGGCAGGTGGGCGCCTCCGG +
Preference number: 2 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPLGRAN*AGGRLR
Trigger: CCGGAGGCGCCCACCTGCCCAGTTAGCCCGGCCAAG...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCAGGGTGGGCAGTCTCTaGGGCGGGTGGGCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGRVGSL*GGWASL
Trigger: GAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCT...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGAGGGTGGGCAGTCTCTaGGGCGGGTGGGCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARRVGSL*GGWASL
Trigger: GAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCT...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCCTCCGGTCCGCACCTTaGTCCAGCAGGGGCTGCCCG +
Preference number: 2 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPLRSAP*SSRGCP
Trigger: CGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAG...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGCTCCGGTCCGCACCTTaGTCCAGCAGGGGCTGCCCG +
Preference number: 2 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQLRSAP*SSRGCP
Trigger: CGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAG...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGCCAAGCCCCTCCGCCTaGGGCCAGTTAGCCCCCGCT +
Preference number: 2 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQPSPSA*GQLAPA
Trigger: AGCGGGGGCTAACTGGCCCCAGGCGGAGGGGCTTGG...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGGTGCTGCGGGAAGGATaGGGCTGCCGTCTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: EGLSPLESGGGGPRRREAVLREG*GCRLCS
Trigger: GGAGCAGAGACGGCAGCCCCATCCTTCCCGCAGCAC...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGCAGACGGGGTGTGGGTaGGCGGTGCCGCAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: EGLSPLESGGGGPRRREAQTGCG*AVPQEE
Trigger: CTCTTCTTGCGGCACCGCCCACCCACACCCCGTCTG...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR TCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGCTCACACCACGGTGCTaGCCGAGGGATCTGAGAGGT +
Preference number: 2 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSLTPRC*PRDLRG
Trigger: ACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAG...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGATCTGCCGGAGCGCCCTaGGGCCCTGCCCAGCCGACT +
Preference number: 2 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGSAGAP*GPAQPT
Trigger: AGTCGGCTGGGCAGGGCCGCAGGGCGCTCCGGCAGA...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGTCTGCCGGAGCGCCCTaGGGCCCTGCCCAGCCGACT +
Preference number: 2 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLSAGAP*GPAQPT
Trigger: AGTCGGCTGGGCAGGGCCGCAGGGCGCTCCGGCAGA...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAGAGACCCCAGGGCCCTaGCTCTGCCGGAGCGCCCTG +
Preference number: 2 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGETPGP*LCRSAL
Trigger: CAGGGCGCTCCGGCAGAGGCAGGGCCCTGGGGTCTC...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCTGGGGCTGCCGTCTCTaGTCCAAGCCCCTCCGCCTG +
Preference number: 2 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAWGCRL*SKPLRL
Trigger: CAGGCGGAGGGGCTTGGAGCAGAGACGGCAGCCCCA...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGGGCGGCGGGAGGCGCTaGCAGCTGGGAAGTCAGGGA +
Preference number: 2 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGGGGRR*QLGSQG
Trigger: TCCCTGACTTCCCAGCTGGCAGCGCCTCCCGCCGCC...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGCTCCCGTGCCCAAGGTaGAGGGCAGGGTTGAAGACA +
Preference number: 2 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSLPCPR*RAGLKT
Trigger: TGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAG...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGGGTGGCGCTCTCCCGTaGCCAAGGTGCAGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGGGALP*PRCRAG
Trigger: CCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACC...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGTGGGGGTTGGGCGGTaGGCGCCTGCACCCTGGGGA +
Preference number: 2 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLVGVGR*APAPWG
Trigger: TCCCCAGGGTGCAGGCGCGCACCGCCCAACCCCCAC...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGAGGGTGGGCAGTCTCTaGGGCGGGTGGGCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQRVGSL*GGWASL
Trigger: GAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCT...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCCCAAGCCCCTCCGCCTaGGGCCAGTTAGCCCCCGCT +
Preference number: 2 (lower is better)
Translates to: RARALGVLVLYKVAGRSRPSPSA*GQLAPA
Trigger: AGCGGGGGCTAACTGGCCCCAGGCGGAGGGGCTTGG...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGCACTGTGGCTCAGGCTaGTGCTGCGGGAAGGATGGG +
Preference number: 2 (lower is better)
Translates to: EGLSPLESGGGGPRRREAHCGSG*CCGKDG
Trigger: CCCATCCTTCCCGCAGCACCAGCCTGAGCCACAGTG...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCCATGGGCCCCACTGTaGCTCAGGCTGGTGCTGCGG +
Preference number: 2 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAPWAPL*LRLVLR
Trigger: CCGCAGCACCAGCCTGAGCCACAGTGGGGCCCATGG...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGCCATGGGCCCCACTGTaGCTCAGGCTGGTGCTGCGG +
Preference number: 2 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPPWAPL*LRLVLR
Trigger: CCGCAGCACCAGCCTGAGCCACAGTGGGGCCCATGG...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCGGGGCAGACGGGGTGTaGGTGGGCGGTGCCGCAAGA +
Preference number: 2 (lower is better)
Translates to: RARALGVLVLYKVAGRSRGADGV*VGGAAR
Trigger: TCTTGCGGCACCGCCCACCCACACCCCGTCTGCCCC...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGAGTCAGGGACGGCCGTaGGGGAGGGCAGGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLSQGRP*GRAGPA
Trigger: GGCTGGCCCTGCCCTCCCCCACGGCCGTCCCTGACT...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAAGTCAGGGACGGCCGTaGGGGAGGGCAGGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGSQGRP*GRAGPA
Trigger: GGCTGGCCCTGCCCTCCCCCACGGCCGTCCCTGACT...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCGGGGAGGCCCGTTCTaGGCTGCAGGCCGGACGAGG +
Preference number: 2 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPRGGPF*AAGRTR
Trigger: CCTCGTCCGGCCTGCAGCCCAGAACGGGCCTCCCCG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGCACGCGCTCGGGCCCTaGGAGTGCTGGTTCTGTACA +
Preference number: 2 (lower is better)
Translates to: EGLSPLESGGGGPRRREAHALGP*ECWFCT
Trigger: TGTACAGAACCAGCACTCCCAGGGCCCGAGCGCGTG...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGGCATACACCGGGAGGTaGGGGTTGGGCGGTGCGCGC +
Preference number: 2 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGAYTGR*GLGGAR
Trigger: GCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGC...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR TCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGGCTGACCGAGGGATCTaGGAGGTTGAGCGGGCCCGT +
Preference number: 2 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPADRGI*EVERAR
Trigger: ACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGC...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR-3UTR TCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGCTCACACCACGGTGCTaGCCGAGGGATCTGAGAGGT +
Preference number: 2 (lower is better)
Translates to: EGLSPLESGGGGPRRREALTPRC*PRDLRG
Trigger: ACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAG...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR-3UTR GCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCCAGCCGACTCAGCTCTaGCCCGTCCTCAGCCGCTCC +
Preference number: 2 (lower is better)
Translates to: RARALGVLVLYKVAGRSRQPTQL*PVLSRS
Trigger: GGAGCGGCTGAGGACGGGGCAGAGCTGAGTCGGCTG...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGCAGCCGACTCAGCTCTaGCCCGTCCTCAGCCGCTCC +
Preference number: 2 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGQPTQL*PVLSRS
Trigger: GGAGCGGCTGAGGACGGGGCAGAGCTGAGTCGGCTG...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCAGGCCCGTTCTGGGCTaGAGGCCGGACGAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: RARALGVLVLYKVAGRSRRPVLG*RPDEER
Trigger: CCTCTCCTCGTCCGGCCTGCAGCCCAGAACGGGCCT...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACTCCGGTCCGCACCTTaGTCCAGCAGGGGCTGCCCG +
Preference number: 2 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGLRSAP*SSRGCP
Trigger: CGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCCAAGCCCCTCCGCCTaGGGCCAGTTAGCCCCCGCT +
Preference number: 2 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLPSPSA*GQLAPA
Trigger: AGCGGGGGCTAACTGGCCCCAGGCGGAGGGGCTTGG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCGTGCTGCGGGAAGGATaGGGCTGCCGTCTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAVLREG*GCRLCS
Trigger: GGAGCAGAGACGGCAGCCCCATCCTTCCCGCAGCAC...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCACTGTGGCTCAGGCTaGTGCTGCGGGAAGGATGGG +
Preference number: 2 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGHCGSG*CCGKDG
Trigger: CCCATCCTTCCCGCAGCACCAGCCTGAGCCACAGTG...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCACTGTGGCTCAGGCTaGTGCTGCGGGAAGGATGGG +
Preference number: 2 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARHCGSG*CCGKDG
Trigger: CCCATCCTTCCCGCAGCACCAGCCTGAGCCACAGTG...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTAGTCAGGGACGGCCGTaGGGGAGGGCAGGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPSQGRP*GRAGPA
Trigger: GGCTGGCCCTGCCCTCCCCCACGGCCGTCCCTGACT...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACAGCCCTCTCGAGTCTaGAGGAGGCGGCCCGAGGCG +
Preference number: 2 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGQPSRV*RRRPEA
Trigger: CGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCAGCCCTCTCGAGTCTaGAGGAGGCGGCCCGAGGCG +
Preference number: 2 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLQPSRV*RRRPEA
Trigger: CGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCAGCCCTCTCGAGTCTaGAGGAGGCGGCCCGAGGCG +
Preference number: 2 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSQPSRV*RRRPEA
Trigger: CGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTG...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACCGGGGAGGCCCGTTCTaGGCTGCAGGCCGGACGAGG +
Preference number: 2 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDRGGPF*AAGRTR
Trigger: CCTCGTCCGGCCTGCAGCCCAGAACGGGCCTCCCCG...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR CAA 90 bp GGGCTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTaGGCCGGGCTAACTGGGCAGGTGGGCGCCTCCGGGGGCCTCACA +
Preference number: 2 (lower is better)
Translates to: GLPSGLPEQQDPSVS*AGLTGQVGASGGLT
Trigger: TGTGAGGCCCCCGGAGGCGCCCACCTGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR-3UTR TCA 90 bp ACTCTGGCCTCAGGTCTGATGGCCAGGTGGCCTGTGCCCGCCAGTGCTGGCAGCGCCCAGGATGCGCGCTaGGAAGCTTCTGGGGGCGCC +
Preference number: 2 (lower is better)
Translates to: TLASGLMARWPVPASAGSAQDAR*EASGGA
Trigger: GGCGCCCCCAGAAGCTTCTCAGCGCGCATCCTGGGC...GCTGCCAGCACTGGCGGGCACAGGCCACCTGGCCATCAGACCTGAGGCCAGAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR TCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCTCACACCACGGTGCTaGCCGAGGGATCTGAGAGGT +
Preference number: 2 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARLTPRC*PRDLRG
Trigger: ACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAG...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACAGCCGACTCAGCTCTaGCCCGTCCTCAGCCGCTCC +
Preference number: 2 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGQPTQL*PVLSRS
Trigger: GGAGCGGCTGAGGACGGGGCAGAGCTGAGTCGGCTG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCTGGGGCTGCCGTCTCTaGTCCAAGCCCCTCCGCCTG +
Preference number: 2 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPWGCRL*SKPLRL
Trigger: CAGGCGGAGGGGCTTGGAGCAGAGACGGCAGCCCCA...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACGGCGGCGGGAGGCGCTaGCAGCTGGGAAGTCAGGGA +
Preference number: 2 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDGGGRR*QLGSQG
Trigger: TCCCTGACTTCCCAGCTGGCAGCGCCTCCCGCCGCC...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAAGGCCCGTTCTGGGCTaGAGGCCGGACGAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGRPVLG*RPDEER
Trigger: CCTCTCCTCGTCCGGCCTGCAGCCCAGAACGGGCCT...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACCTTGGCCGGGCTAACTaGGCAGGTGGGCGCCTCCGG +
Preference number: 2 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDLGRAN*AGGRLR
Trigger: CCGGAGGCGCCCACCTGCCCAGTTAGCCCGGCCAAG...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCCACTGTGGCTCAGGCTaGTGCTGCGGGAAGGATGGG +
Preference number: 2 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPHCGSG*CCGKDG
Trigger: CCCATCCTTCCCGCAGCACCAGCCTGAGCCACAGTG...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCATGGGCCCCACTGTaGCTCAGGCTGGTGCTGCGG +
Preference number: 2 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSPWAPL*LRLVLR
Trigger: CCGCAGCACCAGCCTGAGCCACAGTGGGGCCCATGG...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCCATGGGCCCCACTGTaGCTCAGGCTGGTGCTGCGG +
Preference number: 2 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPPWAPL*LRLVLR
Trigger: CCGCAGCACCAGCCTGAGCCACAGTGGGGCCCATGG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACGCATACACCGGGAGGTaGGGGTTGGGCGGTGCGCGC +
Preference number: 2 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDAYTGR*GLGGAR
Trigger: GCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGC...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR TCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGGTGCAGGGCAGGGTTaGAGACAGTCCCGAGCCAGC +
Preference number: 2 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPGAGQG*RQSRAS
Trigger: GCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR TCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTGCTGACCGAGGGATCTaGGAGGTTGAGCGGGCCCGT +
Preference number: 2 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSADRGI*EVERAR
Trigger: ACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGC...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR-3UTR TCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAGCTGACCGAGGGATCTaGGAGGTTGAGCGGGCCCGT +
Preference number: 2 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGADRGI*EVERAR
Trigger: ACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGC...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR-3UTR GCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACCAGCCGACTCAGCTCTaGCCCGTCCTCAGCCGCTCC +
Preference number: 2 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDQPTQL*PVLSRS
Trigger: GGAGCGGCTGAGGACGGGGCAGAGCTGAGTCGGCTG...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAGAGACCCCAGGGCCCTaGCTCTGCCGGAGCGCCCTG +
Preference number: 2 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLETPGP*LCRSAL
Trigger: CAGGGCGCTCCGGCAGAGGCAGGGCCCTGGGGTCTC...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACGGGAAGGATGGGGCTaGCGTCTCTGCTCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGREGWG*RLCSKP
Trigger: GGGCTTGGAGCAGAGACGGCAGCCCCATCCTTCCCG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCGGGAAGGATGGGGCTaGCGTCTCTGCTCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPREGWG*RLCSKP
Trigger: GGGCTTGGAGCAGAGACGGCAGCCCCATCCTTCCCG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGTGTGGCTCAGGCTGGTaGTGCGGGAAGGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGCGSGW*CGKDGA
Trigger: AGCCCCATCCTTCCCGCAGCACCAGCCTGAGCCACA...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCTGTGGCTCAGGCTGGTaGTGCGGGAAGGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: RARALGVLVLYKVAGRSRCGSGW*CGKDGA
Trigger: AGCCCCATCCTTCCCGCAGCACCAGCCTGAGCCACA...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACAGGCCCGTTCTGGGCTaGAGGCCGGACGAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDRPVLG*RPDEER
Trigger: CCTCTCCTCGTCCGGCCTGCAGCCCAGAACGGGCCT...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTAGGCCCGTTCTGGGCTaGAGGCCGGACGAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPRPVLG*RPDEER
Trigger: CCTCTCCTCGTCCGGCCTGCAGCCCAGAACGGGCCT...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp CAAGAGCGGGCGGATGAGAGGTGTGGAGCCTCCAGCAACCCCCATCCCCCAGCACACGGCCTTCGGGGATaGAGGAGGGCCGTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: QERADERCGASSNPHPPAHGLRG*RRAVAR
Trigger: CCTGGCCACGGCCCTCCTCCATCCCCGAAGGCCGTG...TGCTGGGGGATGGGGGTTGCTGGAGGCTCCACACCTCTCATCCGCCCGCTCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp TCCTATGGAATGGGTACCGGCGGGCGACTCTGGAGACAGAGGGGCCAGGCGGAGGCTGCCCCCGTGCCCTaGGAGCACTCACCACTGCCC +
Preference number: 2 (lower is better)
Translates to: SYGMGTGGRLWRQRGQAEAAPVP*EHSPLP
Trigger: GGGCAGTGGTGAGTGCTCCCAGGGCACGGGGGCAGC...CTCCGCCTGGCCCCTCTGTCTCCAGAGTCGCCCGCCGGTACCCATTCCATAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAGTGCTGCGGGAAGGATaGGGCTGCCGTCTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGVLREG*GCRLCS
Trigger: GGAGCAGAGACGGCAGCCCCATCCTTCCCGCAGCAC...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCAGACGGGGTGTGGGTaGGCGGTGCCGCAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSQTGCG*AVPQEE
Trigger: CTCTTCTTGCGGCACCGCCCACCCACACCCCGTCTG...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCAGACGGGGTGTGGGTaGGCGGTGCCGCAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLQTGCG*AVPQEE
Trigger: CTCTTCTTGCGGCACCGCCCACCCACACCCCGTCTG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTAGTCAGGGACGGCCGTaGGGGAGGGCAGGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPSQGRP*GRAGPA
Trigger: GGCTGGCCCTGCCCTCCCCCACGGCCGTCCCTGACT...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp TTCCGCCACACGTTAACGGCGGCAAAGGCCAGCTGCATCTGCTTCCGGCGAGCACCGTGTGGCGGGGGCTaGCCGGCGACGTGTCGTTGG +
Preference number: 2 (lower is better)
Translates to: FRHTLTAAKASCICFRRAPCGGG*PATCRW
Trigger: CCAACGACACGTCGCCGGGCAGCCCCCGCCACACGG...TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGCCGTTAACGTGTGGCGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCTGTGGCTCAGGCTGGTaGTGCGGGAAGGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPCGSGW*CGKDGA
Trigger: AGCCCCATCCTTCCCGCAGCACCAGCCTGAGCCACA...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTTGTGGCTCAGGCTGGTaGTGCGGGAAGGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSCGSGW*CGKDGA
Trigger: AGCCCCATCCTTCCCGCAGCACCAGCCTGAGCCACA...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGCTCCCGTGCCCAAGGTaGAGGGCAGGGTTGAAGACA +
Preference number: 2 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGLPCPR*RAGLKT
Trigger: TGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAG...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCCTCCCGTGCCCAAGGTaGAGGGCAGGGTTGAAGACA +
Preference number: 2 (lower is better)
Translates to: RARALGVLVLYKVAGRSRLPCPR*RAGLKT
Trigger: TGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAG...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GCAGGTGGAGTCGGACGCGGGACTGGGGTGCTCTCCCCCTTACCGTGTCTTTGGGCTCCTGGGTGGCCCTaGCTTACAGGCGTCCCGAGG +
Preference number: 2 (lower is better)
Translates to: AGGVGRGTGVLSPLPCLWAPGWP*LTGVPR
Trigger: CCTCGGGACGCCTGTAAGCCAGGGCCACCCAGGAGC...CCAAAGACACGGTAAGGGGGAGAGCACCCCAGTCCCGCGTCCGACTCCACCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTCTCCGGTCCGCACCTTaGTCCAGCAGGGGCTGCCCG +
Preference number: 2 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPLRSAP*SSRGCP
Trigger: CGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAG...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGTGCTGCGGGAAGGATaGGGCTGCCGTCTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPVLREG*GCRLCS
Trigger: GGAGCAGAGACGGCAGCCCCATCCTTCCCGCAGCAC...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCACTGTGGCTCAGGCTaGTGCTGCGGGAAGGATGGG +
Preference number: 2 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSHCGSG*CCGKDG
Trigger: CCCATCCTTCCCGCAGCACCAGCCTGAGCCACAGTG...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGGGGCAGACGGGGTGTaGGTGGGCGGTGCCGCAAGA +
Preference number: 2 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPGADGV*VGGAAR
Trigger: TCTTGCGGCACCGCCCACCCACACCCCGTCTGCCCC...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCTGGTTCTGTACAAGGTaGCGGGCCGGTCACGCACCC +
Preference number: 2 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPWFCTR*RAGHAP
Trigger: GGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCA...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGGGCCCTGGGAGTGCTaGTTCTGTACAAGGTGGCGG +
Preference number: 2 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPGPWEC*FCTRWR
Trigger: CCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCATACACCGGGAGGTaGGGGTTGGGCGGTGCGCGC +
Preference number: 2 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPAYTGR*GLGGAR
Trigger: GCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGC...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp ACTCTGGCCTCAGGTCTGATGGCCAGGTGGCCTGTGCCCGCCAGTGCTGGCAGCCCTCGGAGGGTGGCCTaGCCTACCTGCAGGTTCTTC +
Preference number: 2 (lower is better)
Translates to: TLASGLMARWPVPASAGSPRRVA*PTCRFF
Trigger: GAAGAACCTGCAGGTAGGGCAGGCCACCCTCCGAGG...GCTGCCAGCACTGGCGGGCACAGGCCACCTGGCCATCAGACCTGAGGCCAGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp CGGCACCCAGAGAAAGAGAAGAGACGGAGTGAACCGGAACTCGACCGCGGGCCAAGGCTTGGAGCAGGGTaGGTGGCCTCCCTCGGCCCC +
Preference number: 2 (lower is better)
Translates to: RHPEKEKRRSEPELDRGPRLGAG*VASLGP
Trigger: GGGGCCGAGGGAGGCCACGCACCCTGCTCCAAGCCT...TGGCCCGCGGTCGAGTTCCGGTTCACTCCGTCTCTTCTCTTTCTCTGGGTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTATGGGGCTGCCGTCTCTaGTCCAAGCCCCTCCGCCTG +
Preference number: 2 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLWGCRL*SKPLRL
Trigger: CAGGCGGAGGGGCTTGGAGCAGAGACGGCAGCCCCA...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTTGGGGCTGCCGTCTCTaGTCCAAGCCCCTCCGCCTG +
Preference number: 2 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPWGCRL*SKPLRL
Trigger: CAGGCGGAGGGGCTTGGAGCAGAGACGGCAGCCCCA...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTTGTGGCTCAGGCTGGTaGTGCGGGAAGGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPCGSGW*CGKDGA
Trigger: AGCCCCATCCTTCCCGCAGCACCAGCCTGAGCCACA...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCTCCCGTGCCCAAGGTaGAGGGCAGGGTTGAAGACA +
Preference number: 2 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPLPCPR*RAGLKT
Trigger: TGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACTCCCGTGCCCAAGGTaGAGGGCAGGGTTGAAGACA +
Preference number: 2 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGLPCPR*RAGLKT
Trigger: TGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCTCGGGCCCTGGGAGTaGTGGTTCTGTACAAGGTGG +
Preference number: 2 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPLGPWE*WFCTRW
Trigger: CCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGAGGGTGGGCAGTCTCTaGGGCGGGTGGGCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGRVGSL*GGWASL
Trigger: GAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCT...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAAGGGTGGGCAGTCTCTaGGGCGGGTGGGCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLRVGSL*GGWASL
Trigger: GAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCT...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR GCA 90 bp CAGGACGCCCCAGGAGAACCACATGGCCGAGGACAGGGTCAGTGCGTCCTCCTCCGCCACGATCATGTCTaGCTGCCCGCTGAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: QDAPGEPHGRGQGQCVLLRHDHV*LPAEQL
Trigger: GAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCG...GAGGAGGACGCACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGGGCGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTACGGGAAGGATGGGGCTaGCGTCTCTGCTCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLREGWG*RLCSKP
Trigger: GGGCTTGGAGCAGAGACGGCAGCCCCATCCTTCCCG...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR TCA 90 bp ACTCTGGCCTCAGGTCTGATGGCCAGGTGGCCTGTGCCCGCCAGTGCTGGCAGCGGTGCACCTCGTAGGTaGAGTTCATGGTCCGTGCCA +
Preference number: 2 (lower is better)
Translates to: TLASGLMARWPVPASAGSGAPRR*SSWSVP
Trigger: TGGCACGGACCATGAACTTCACCTACGAGGTGCACC...GCTGCCAGCACTGGCGGGCACAGGCCACCTGGCCATCAGACCTGAGGCCAGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR TCA 90 bp TTCCGCCACACGTTAACGGCGGCAAAGGCCAGCTGCATCTGCTTCCGGCGAGCATGTCTGCCTGCCCGCTaGGCAGCTCGCCCATCATCC +
Preference number: 2 (lower is better)
Translates to: FRHTLTAAKASCICFRRACLPAR*AARPSS
Trigger: GGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACA...TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGCCGTTAACGTGTGGCGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR TCA 90 bp GCTCAGCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTCCCCGATGCCGGAGTTaGGCAGGACGCCCCAGGAGA +
Preference number: 2 (lower is better)
Translates to: AQLHLAPEVDIHGALLHRPRCRS*AGRPRR
Trigger: TCTCCTGGGGCGTCCTGCTCAACTCCGGCATCGGGG...ACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCTTTAGGCATCACCACTaGATACACCGGGAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPFRHHH*IHREVG
Trigger: CCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CCA 90 bp AACCACATGGCCGAGGACAGGGTCAGTGCGTCCTCCTCCTCCTCCTCGCTGTTCCCGGCGACGTGTCGTTaGGCCCGGTGCAGATCACCT +
Preference number: 2 (lower is better)
Translates to: NHMAEDRVSASSSSSSLFPATCR*ARCRSP
Trigger: AGGTGATCTGCACCGGGCCCAACGACACGTCGCCGG...GAACAGCGAGGAGGAGGAGGAGGACGCACTGACCCTGTCCTCGGCCATGTGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTTGGTTCTGTACAAGGTaGCGGGCCGGTCACGCACCC +
Preference number: 2 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPWFCTR*RAGHAP
Trigger: GGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCA...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR CAA 90 bp TGGAGTCGGACGCGGGACTGGGGTGCTCTCCCCCTTACCGTGTCTTaGGAGGACCTACGCCTCTTGAAGCTGGAAGCCAGGGTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: WSRTRDWGALPLTVS*EDLRLLKLEARVEV
Trigger: CACCTCCACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGGTAAGGGGGAGAGCACCCCAGTCCCGCGTCCGACTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp GCTCAGCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTGCGCTGAGAAGCTTCTaGGGGCGCCTTCCCCGATGC +
Preference number: 2 (lower is better)
Translates to: AQLHLAPEVDIHGALLHRALRSF*GRLPRC
Trigger: GCATCGGGGAAGGCGCCCCCAGAAGCTTCTCAGCGC...ACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp TCTGCGTGGAGGCCACTGACCCCCAAGGGGCACACACCAAGATTCAGGAAGGGGATCCCCCAGCAGCCCTaGCCGCACTGTCGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: SAWRPLTPKGHTPRFRKGIPQQP*PHCRLH
Trigger: ATGAAGCCGACAGTGCGGCCAGGGCTGCTGGGGGAT...CCCCTTCCTGAATCTTGGTGTGTGCCCCTTGGGGGTCAGTGGCCTCCACGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp TCTGCGTGGAGGCCACTGACCCCCAAGGGGCACACACCAAGATTCAGGAAGGGGGGCTGTCTTTGCGCATaGCTATGCCGAAGCCCGAGC +
Preference number: 2 (lower is better)
Translates to: SAWRPLTPKGHTPRFRKGGCLCA*LCRSPS
Trigger: GCTCGGGCTTCGGCATAGGCATGCGCAAAGACAGCC...CCCCTTCCTGAATCTTGGTGTGTGCCCCTTGGGGGTCAGTGGCCTCCACGCAGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR TCA 90 bp TTCCGCCACACGTTAACGGCGGCAAAGGCCAGCTGCATCTGCTTCCGGCGAGCACCGCCGAGTCCCAGATaGAGGCATGCAGCTTGTTGT +
Preference number: 2 (lower is better)
Translates to: FRHTLTAAKASCICFRRAPPSPR*RHAACC
Trigger: ACAACAAGCTGCATGCCTTCATCTGGGACTCGGCGG...TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGCCGTTAACGTGTGGCGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGTCAGTGGGATGGTACTaGTGCAAAATAGAAATACAC +
Preference number: 2 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARSVGWY*CKIEIH
Trigger: GTGTATTTCTATTTTGCAGCAGTACCATCCCACTGA...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR-3UTR CCA 90 bp CAAGAGCGGGCGGATGAGAGGTGTGGAGCCTCCAGCAACCCCCATCCCCCAGCACGTGGCTGCCCTTGCTaGTGGCAAATTCTCATGGAT +
Preference number: 2 (lower is better)
Translates to: QERADERCGASSNPHPPARGCPC*WQILMD
Trigger: ATCCATGAGAATTTGCCACCAGCAAGGGCAGCCACG...TGCTGGGGGATGGGGGTTGCTGGAGGCTCCACACCTCTCATCCGCCCGCTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGGTGATATCAGTGGGATaGTACTGCTGCAAAATAGAA +
Preference number: 2 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWVISVG*YCCKIE
Trigger: TTCTATTTTGCAGCAGTACCATCCCACTGATATCAC...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR CAA 90 bp GTGTCGTTGGGCCCGGTGCAGATCACCTTCTTGACTGGGTCGCCGTaGACTGTGAACTCCTCCTTGCATGTCCCATCACTCAGCGTGGGC +
Preference number: 2 (lower is better)
Translates to: VSLGPVQITFLTGSP*TVNSSLHVPSLSVG
Trigger: GCCCACGCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCACCGGGCCCAACGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CAA 90 bp CTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTaGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATA +
Preference number: 2 (lower is better)
Translates to: LRGPHTTVLTEGSER*SGPVISVGWYCCKI
Trigger: TATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR-3UTR TCA 90 bp GTTGGGCCCGGTGCAGATCACCTTCTTGACTGGGTCGCCGTTGACTGTGAACTCCACTCAGCGTGGGCTTaGCGTACACGAAGGGCTCCT +
Preference number: 2 (lower is better)
Translates to: VGPGADHLLDWVAVDCELHSAWA*RTRRAP
Trigger: AGGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTG...GAGTTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCACCGGGCCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp GCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTGGCGTGGGTGCCATTGTAGATaGCCACTTGCACCAGCTTGC +
Preference number: 2 (lower is better)
Translates to: APPGAGSRYPRSSASPWRGCHCR*PLAPAC
Trigger: GCAAGCTGGTGCAAGTGGGCATCTACAATGGCACCC...ACGCCACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp GCTCAGCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTGCCGAACTTGCCATCTaGCACCAGGTGCACCTCGTA +
Preference number: 2 (lower is better)
Translates to: AQLHLAPEVDIHGALLHRAELAI*HQVHLV
Trigger: TACGAGGTGCACCTGGTGGCAGATGGCAAGTTCGGC...ACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGCTGAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp AAACAGCTCTCCAGTCGTCACCAGGTCGCACTTCTGCGAGGCCTCGAACTCCAGTATGCCGGTACATGGTaGTCAGCTCCACCTGGCGCC +
Preference number: 2 (lower is better)
Translates to: KQLSSRHQVALLRGLELQYAGTW*SAPPGA
Trigger: GGCGCCAGGTGGAGCTGAGCACCATGTACCGGCATA...CTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGTGACGACTGGAGAGCTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp TTCCGCCACACGTTAACGGCGGCAAAGGCCAGCTGCATCTGCTTCCGGCGAGCAGACAGGGAGACGTTCTaGTTCCAGGGGCTGTCTTTG +
Preference number: 2 (lower is better)
Translates to: FRHTLTAAKASCICFRRADRETF*FQGLSL
Trigger: CAAAGACAGCCCCTGGAAGCAGAACGTCTCCCTGTC...TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGCCGTTAACGTGTGGCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp TCTGCGTGGAGGCCACTGACCCCCAAGGGGCACACACCAAGATTCAGGAAGGGGCTCTGTCTCTCCGCCTaGCCAGATGATCTTCCTGTC +
Preference number: 2 (lower is better)
Translates to: SAWRPLTPKGHTPRFRKGLCLSA*PDDLPV
Trigger: GACAGGAAGATCATCTGGCCAGGCGGAGAGACAGAG...CCCCTTCCTGAATCTTGGTGTGTGCCCCTTGGGGGTCAGTGGCCTCCACGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp TCTGCGTGGAGGCCACTGACCCCCAAGGGGCACACACCAAGATTCAGGAAGGGGGTGTCGAGGTGGAATTaGAGTGACAGAGGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: SAWRPLTPKGHTPRFRKGVSRWN*SDRGSS
Trigger: GGAGCTGCCTCTGTCACTCCAATTCCACCTCGACAC...CCCCTTCCTGAATCTTGGTGTGTGCCCCTTGGGGGTCAGTGGCCTCCACGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR TCA 90 bp GGCCATGTTCTCAAAAGTAAGGGTCGCAGGGGCGTTGCTGCGCGAGTCACATTCTCTGGAACGGCTGCATaGACGAGTCCAGCGTGCTCC +
Preference number: 2 (lower is better)
Translates to: GHVLKSKGRRGVAARVTFSGTAA*TSPACS
Trigger: GGAGCACGCTGGACTCGTTCATGCAGCCGTTCCAGA...GAATGTGACTCGCGCAGCAACGCCCCTGCGACCCTTACTTTTGAGAACATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp TCGCTGTTCACCTTGAACCGGCCGAAGGGGCTGAAGCGGTCCAGCAGGTACAGCGAAGTTCATGGTCCGTaGCAGCTTGATGAGCAGGTC +
Preference number: 2 (lower is better)
Translates to: SLFTLNRPKGLKRSSRYSEVHGP*QLDEQV
Trigger: GACCTGCTCATCAAGCTGGCACGGACCATGAACTTC...GCTGTACCTGCTGGACCGCTTCAGCCCCTTCGGCCGGTTCAAGGTGAACAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp CCAGGTGGGCCGTGGCTGCCCTTGCTGGTGGCAAATTCTCATGGATACAACCTGCCTGTGTGCCGAACTTaGCATCTGCCACCAGGTGCA +
Preference number: 2 (lower is better)
Translates to: PGGPWLPLLVANSHGYNLPVCRT*HLPPGA
Trigger: TGCACCTGGTGGCAGATGGCAAGTTCGGCACACAGG...CAGGTTGTATCCATGAGAATTTGCCACCAGCAAGGGCAGCCACGGCCCACCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp ACCGTGTCTTTGGAGGACCTACGCCTCTTGAAGCTGGAAGCCAGGGTGGAGGTGTCACCCGCTCCTGTGTaGCGAACTTGCCATCTGCCA +
Preference number: 2 (lower is better)
Translates to: TVSLEDLRLLKLEARVEVSPAPV*RTCHLP
Trigger: TGGCAGATGGCAAGTTCGGCACACAGGAGCGGGTGA...CACCTCCACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp GTTAGCGGCGCCACGATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCCAATCTTCAGTCTGGTaGACATCTGGTACCCTCGAG +
Preference number: 2 (lower is better)
Translates to: VSGATIMSACPLSSSPIIQSSVW*TSGTLE
Trigger: CTCGAGGGTACCAGATGTCCACCAGACTGAAGATTG...GATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCGCCGCTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp CCTACCTGCAGGTTCTTCCGCCACACGTTAACGGCGGCAAAGGCCAGCTGCATCAGCCACAGTGTGCTCTaGAACGGCTGCATGAACGAG +
Preference number: 2 (lower is better)
Translates to: PTCRFFRHTLTAAKASCISHSVL*NGCMNE
Trigger: CTCGTTCATGCAGCCGTTCCAGAGCACACTGTGGCT...GATGCAGCTGGCCTTTGCCGCCGTTAACGTGTGGCGGAAGAACCTGCAGGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCGTGATATCAGTGGGATaGTACTGCTGCAAAATAGAA +
Preference number: 2 (lower is better)
Translates to: RARALGVLVLYKVAGRSRVISVG*YCCKIE
Trigger: TTCTATTTTGCAGCAGTACCATCCCACTGATATCAC...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR CAA 90 bp GACTTGAGGATGGACAGGGAGACGTTCTGCTTCCAGGGGCTGTCTTaGCGCATGCCTATGCCGAAGCCCGAGCGGAAAAACAGCTCTCCA +
Preference number: 2 (lower is better)
Translates to: DLRMDRETFCFQGLS*RMPMPKPERKNSSP
Trigger: TGGAGAGCTGTTTTTCCGCTCGGGCTTCGGCATAGGCATGCGCAAAGACAGCCCCTGGAAGCAGAACGTCTCCCTGTCCATCCTCAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CAA 90 bp TGGGGTGCTCTCCCCCTTACCGTGTCTTTGGAGGACCTACGCCTCTaGAAGCTGGAAGCCAGGGTGGAGGTGATAGCCCTAAATGTGGCT +
Preference number: 2 (lower is better)
Translates to: WGALPLTVSLEDLRL*KLEARVEVIALNVA
Trigger: AGCCACATTTAGGGCTATCACCTCCACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGGTAAGGGGGAGAGCACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR TCA 90 bp TCTGCGTGGAGGCCACTGACCCCCAAGGGGCACACACCAAGATTCAGGAAGGGGCTGTCTTACCCTGCCTaGTTGCCTTCCTATGGAATG +
Preference number: 2 (lower is better)
Translates to: SAWRPLTPKGHTPRFRKGLSYPA*LPSYGM
Trigger: CATTCCATAGGAAGGCAATCAGGCAGGGTAAGACAG...CCCCTTCCTGAATCTTGGTGTGTGCCCCTTGGGGGTCAGTGGCCTCCACGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp CTGTCGGCTTCATCTCAGGACACAGGCTCCAGGACGGCACCCAGAGAAAGAGAAGTGCTCTGGAACGGCTaGATGAACGAGTCCAGCGTG +
Preference number: 2 (lower is better)
Translates to: LSASSQDTGSRTAPREREVLWNG*MNESSV
Trigger: CACGCTGGACTCGTTCATGCAGCCGTTCCAGAGCAC...TTCTCTTTCTCTGGGTGCCGTCCTGGAGCCTGTGTCCTGAGATGAAGCCGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp ACCGTGTCTTTGGAGGACCTACGCCTCTTGAAGCTGGAAGCCAGGGTGGAGGTGGCCCCTGTCTTACCCTaGCTGATTGCCTTCCTATGG +
Preference number: 2 (lower is better)
Translates to: TVSLEDLRLLKLEARVEVAPVLP*LIAFLW
Trigger: CCATAGGAAGGCAATCAGGCAGGGTAAGACAGGGGC...CACCTCCACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCTCAGTGGGATGGTACTaGTGCAAAATAGAAATACAC +
Preference number: 2 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPSVGWY*CKIEIH
Trigger: GTGTATTTCTATTTTGCAGCAGTACCATCCCACTGA...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR-3UTR CCA 90 bp GCGCGCTCGTTGTTTATGGTTAGCGGCGCCACGATCATGTCTGCCTGCCCGCTGTACACGAAGGGCTCCTaGTGGATCGTCACAATCTTC +
Preference number: 2 (lower is better)
Translates to: ARSLFMVSGATIMSACPLYTKGS*WIVTIF
Trigger: GAAGATTGTGACGATCCACCAGGAGCCCTTCGTGTA...CAGCGGGCAGGCAGACATGATCGTGGCGCCGCTAACCATAAACAACGAGCGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp ATTCTCGTGGGACTTGAGGATGGACAGGGAGACGTTCTGCTTCCAGGGGCTGTCCCATATGCCGGTACATaGTGCTCAGCTCCACCTGGC +
Preference number: 2 (lower is better)
Translates to: ILVGLEDGQGDVLLPGAVPYAGT*CSAPPG
Trigger: GCCAGGTGGAGCTGAGCACCATGTACCGGCATATGG...GACAGCCCCTGGAAGCAGAACGTCTCCCTGTCCATCCTCAAGTCCCACGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp GGTGCTCTCCCCCTTACCGTGTCTTTGGAGGACCTACGCCTCTTGAAGCTGGAACTCATGGATACAACCTaGGCACCAGGCAGGACCGGA +
Preference number: 2 (lower is better)
Translates to: GALPLTVSLEDLRLLKLELMDTT*APGRTG
Trigger: TCCGGTCCTGCCTGGTGCCCAGGTTGTATCCATGAG...TTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGGTAAGGGGGAGAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CAA 90 bp CAGATCACCTTCTTGACTGGGTCGCCGTTGACTGTGAACTCCTCCTaGCATGTCCCATCACTCAGCGTGGGCTTGACGTACACGAAGGGC +
Preference number: 2 (lower is better)
Translates to: QITFLTGSPLTVNSS*HVPSLSVGLTYTKG
Trigger: GCCCTTCGTGTACGTCAAGCCCACGCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR TCA 90 bp GGATGGCCTCCGCCGCACTCTCGTAGTTGTGCTTCTCCATATGCCGGTACATGGTCAGGCCCTGGTACTTaGAGGGCTTGGAAAACTCGA +
Preference number: 2 (lower is better)
Translates to: GWPPPHSRSCASPYAGTWSGPGT*RAWKTR
Trigger: TCGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGA...CCATGTACCGGCATATGGAGAAGCACAACTACGAGAGTGCGGCGGAGGCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR TCA 90 bp ACCGTGTCTTTGGAGGACCTACGCCTCTTGAAGCTGGAAGCCAGGGTGGAGGTGTGTCCAGGTCTTCCATaGAGCCATTCTCGTGGGACT +
Preference number: 2 (lower is better)
Translates to: TVSLEDLRLLKLEARVEVCPGLP*SHSRGT
Trigger: AGTCCCACGAGAATGGCTTCATGGAAGACCTGGACA...CACCTCCACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp GCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTGGCGTAGAATAGTCAGGCCCTaGTACTTGAAGGGCTTGGAA +
Preference number: 2 (lower is better)
Translates to: APPGAGSRYPRSSASPWRRIVRP*YLKGLE
Trigger: TTCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCT...ACGCCACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp CGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCTTGGCCGGGCTAACTaGGCAGGTGGGCGCCTCCGG +
Preference number: 2 (lower is better)
Translates to: RDISGMVLLQNRNTQTRRLGRAN*AGGRLR
Trigger: CCGGAGGCGCCCACCTGCCCAGTTAGCCCGGCCAAG...GCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACGTGATATCAGTGGGATaGTACTGCTGCAAAATAGAA +
Preference number: 2 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDVISVG*YCCKIE
Trigger: TTCTATTTTGCAGCAGTACCATCCCACTGATATCAC...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR-3UTR CCA 90 bp GGATGGCCTCCGCCGCACTCTCGTAGTTGTGCTTCTCCATATGCCGGTACATGGACGAAGGGCTCCTGGTaGATCGTCACAATCTTCAGT +
Preference number: 2 (lower is better)
Translates to: GWPPPHSRSCASPYAGTWTKGSW*IVTIFS
Trigger: ACTGAAGATTGTGACGATCCACCAGGAGCCCTTCGT...CCATGTACCGGCATATGGAGAAGCACAACTACGAGAGTGCGGCGGAGGCCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp GTGATAGCCCTAAATGTGGCTTTCTTTTTAGGGTCAGGCTCTGCTCTACCACTCTTGGGGGCTCTCGGCTaGCTCTTCCTGGGAGGTCCG +
Preference number: 2 (lower is better)
Translates to: VIALNVAFFLGSGSALPLLGALG*LFLGGP
Trigger: CGGACCTCCCAGGAAGAGCCAGCCGAGAGCCCCCAA...GAGTGGTAGAGCAGAGCCTGACCCTAAAAAGAAAGCCACATTTAGGGCTATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp CCAGGTGGGCCGTGGCTGCCCTTGCTGGTGGCAAATTCTCATGGATACAACCTGTCACAATCTTCAGTCTaGTGGACATCTGGTACCCTC +
Preference number: 2 (lower is better)
Translates to: PGGPWLPLLVANSHGYNLSQSSV*WTSGTL
Trigger: GAGGGTACCAGATGTCCACCAGACTGAAGATTGTGA...CAGGTTGTATCCATGAGAATTTGCCACCAGCAAGGGCAGCCACGGCCCACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp CTGTCGGCTTCATCTCAGGACACAGGCTCCAGGACGGCACCCAGAGAAAGAGAAGATCACCTTCTTGACTaGGTCGCCGTTGACTGTGAA +
Preference number: 2 (lower is better)
Translates to: LSASSQDTGSRTAPREREDHLLD*VAVDCE
Trigger: TTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATC...TTCTCTTTCTCTGGGTGCCGTCCTGGAGCCTGTGTCCTGAGATGAAGCCGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAGTGATATCAGTGGGATaGTACTGCTGCAAAATAGAA +
Preference number: 2 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLVISVG*YCCKIE
Trigger: TTCTATTTTGCAGCAGTACCATCCCACTGATATCAC...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR CAA 90 bp TTGACTGTGAACTCCTCCTTGCATGTCCCATCACTCAGCGTGGGCTaGACGTACACGAAGGGCTCCTGGTGGATCGTCACAATCTTCAGT +
Preference number: 2 (lower is better)
Translates to: LTVNSSLHVPSLSVG*TYTKGSWWIVTIFS
Trigger: ACTGAAGATTGTGACGATCCACCAGGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CAA 90 bp CTCCGGGGAATCTCCTTCTTGACCAGAATAGTCAGGCCCTGGTACTaGAAGGGCTTGGAAAACTCGATGTACTGCGCGCGCTCGTTGTTT +
Preference number: 2 (lower is better)
Translates to: LRGISFLTRIVRPWY*KGLENSMYCARSLF
Trigger: AAACAACGAGCGCGCGCAGTACATCGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCTGGTCAAGAAGGAGATTCCCCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR GCA 90 bp GGTGCTCTCCCCCTTACCGTGTCTTTGGAGGACCTACGCCTCTTGAAGCTGGAACTTACCCTGCCTGATTaGCTTCCTATGGAATGGGTA +
Preference number: 2 (lower is better)
Translates to: GALPLTVSLEDLRLLKLELTLPD*LPMEWV
Trigger: TACCCATTCCATAGGAAGGCAATCAGGCAGGGTAAG...TTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGGTAAGGGGGAGAGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR TCA 90 bp GGGAATCTCCTTCTTGACCAGAATAGTCAGGCCCTGGTACTTGAAGGGCTTGGAGGTTCTGCAGGTTCATaGTGCTGTAGTTGGCGAACT +
Preference number: 2 (lower is better)
Translates to: GNLLLDQNSQALVLEGLGGSAGS*CCSWRT
Trigger: AGTTCGCCAACTACAGCATCATGAACCTGCAGAACC...TCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCTGGTCAAGAAGGAGATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR TCA 90 bp GTGATAGCCCTAAATGTGGCTTTCTTTTTAGGGTCAGGCTCTGCTCTACCACTCCGCGAGTCACATTCCTaGTACCGAACCCACGTCTTG +
Preference number: 2 (lower is better)
Translates to: VIALNVAFFLGSGSALPLRESHS*YRTHVL
Trigger: CAAGACGTGGGTTCGGTATCAGGAATGTGACTCGCG...GAGTGGTAGAGCAGAGCCTGACCCTAAAAAGAAAGCCACATTTAGGGCTATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp GTGATAGCCCTAAATGTGGCTTTCTTTTTAGGGTCAGGCTCTGCTCTACCACTCCGCGCTCGTTGTTTATaGTTAGCGGCGCCACGATCA +
Preference number: 2 (lower is better)
Translates to: VIALNVAFFLGSGSALPLRARCL*LAAPRS
Trigger: TGATCGTGGCGCCGCTAACCATAAACAACGAGCGCG...GAGTGGTAGAGCAGAGCCTGACCCTAAAAAGAAAGCCACATTTAGGGCTATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CAA 90 bp ATCTCCTTCTTGACCAGAATAGTCAGGCCCTGGTACTTGAAGGGCTaGGAAAACTCGATGTACTGCGCGCGCTCGTTGTTTATGGTTAGC +
Preference number: 2 (lower is better)
Translates to: ISFLTRIVRPWYLKG*ENSMYCARSLFMVS
Trigger: GCTAACCATAAACAACGAGCGCGCGCAGTACATCGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCTGGTCAAGAAGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CCA 90 bp GTGATAGCCCTAAATGTGGCTTTCTTTTTAGGGTCAGGCTCTGCTCTACCACTCAGTCTGGTGGACATCTaGTACCCTCGAGGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: VIALNVAFFLGSGSALPLSLVDI*YPRGFS
Trigger: AGAGAAGCCTCGAGGGTACCAGATGTCCACCAGACT...GAGTGGTAGAGCAGAGCCTGACCCTAAAAAGAAAGCCACATTTAGGGCTATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGGCTCCGGTCCGCACCTaGGTCCAGCAGGGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARAPVRT*VQQGLP
Trigger: GGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGC...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR GCA 72 bp GAGCGAGGGCGGGGGCGGGCGGGTGGCGCTCTCCCGTaGCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCG +
Preference number: 3 (lower is better)
Translates to: ERGRGRAGGALP*PRCRAGLKTVP
Trigger: CGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGCCCCCGCCCTCGCTC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR CCA 72 bp CACCAGAGCCAGAGCCAGTGCCACGGCCTTCGGGGATaGAGGAGGGCCGTGGCCAGGCCGGGCCCTGGGCAC +
Preference number: 3 (lower is better)
Translates to: HQSQSQCHGLRG*RRAVARPGPGH
Trigger: GTGCCCAGGGCCCGGCCTGGCCACGGCCCTCCTCCATCCCCGAAGGCCGTGGCACTGGCTCTGGCTCTGGTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 72 bp GCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTaGCGGGCCGGTCACGCACCCGGAGCGAGGGCGGGG +
Preference number: 3 (lower is better)
Translates to: ALGPWECWFCTR*RAGHAPGARAG
Trigger: CCCCGCCCTCGCTCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR GCA 72 bp CCAGCCTGGCCGGCCACTTGGGCCCTCGCTCCTGCCTaGCTCCCTGTGCTGGACAGACGGGCCGACAGCGGA +
Preference number: 3 (lower is better)
Translates to: PAWPATWALAPA*LPVLDRRADSG
Trigger: TCCGCTGTCGGCCCGTCTGTCCAGCACAGGGAGGCAGGCAGGAGCGAGGGCCCAAGTGGCCGGCCAGGCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 72 bp CTGCCCAGCCTGGCCGGCCACTTGGGCCCTCGCTCCTaGCTGCCTCCCTGTGCTGGACAGACGGGCCGACAG +
Preference number: 3 (lower is better)
Translates to: LPSLAGHLGPRS*LPPCAGQTGRQ
Trigger: CTGTCGGCCCGTCTGTCCAGCACAGGGAGGCAGGCAGGAGCGAGGGCCCAAGTGGCCGGCCAGGCTGGGCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 72 bp CGGGGGCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTaGAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGT +
Preference number: 3 (lower is better)
Translates to: RGRAGGALPCPR*RAGLKTVPSQR
Trigger: ACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGCCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR CCA 72 bp GACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTaGGCTTCCCTCAGGCCTTCCCGAGCAGCAGGACCC +
Preference number: 3 (lower is better)
Translates to: DGRPRVGSLWGG*ASLRPSRAAGP
Trigger: GGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR CCA 72 bp GCACGGGCCGCACGGGGAAGGCACGCGCTCGGGCCCTaGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGT +
Preference number: 3 (lower is better)
Translates to: ARAARGRHALGP*ECWFCTRWRAG
Trigger: ACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCGTGCCTTCCCCGTGCGGCCCGTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CAA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCGCTCCGGTCCGCACCTaGGTCCAGCAGGGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: RARALGVLVLYKVAGRSRAPVRT*VQQGLP
Trigger: GGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGC...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CAA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGAGGTGCAGGGCAGGGTaGAAGACAGTCCCGAGCCAG +
Preference number: 3 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSRCRAG*KTVPSQ
Trigger: CTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCT...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CAA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGCTCCGGTCCGCACCTaGGTCCAGCAGGGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLAPVRT*VQQGLP
Trigger: GGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGC...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CAA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTGCTCCGGTCCGCACCTaGGTCCAGCAGGGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSAPVRT*VQQGLP
Trigger: GGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGC...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CAA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACACCGGGAGGTGGGGGTaGGGCGGTGCGCGCCTGCAC +
Preference number: 3 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDTGRWG*GGARLH
Trigger: GTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGT...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR CCA 72 bp GCACGGGGAAGGCACGCGCTCGGGCCCTGGGAGTGCTaGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCC +
Preference number: 3 (lower is better)
Translates to: ARGRHALGPWEC*FCTRWRAGHAP
Trigger: GGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCGTGCCTTCCCCGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CAA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCGACCCATCAGTGTCCTaGGCCGGGCTAACTGGGCAG +
Preference number: 3 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSDPSVS*AGLTGQ
Trigger: CTGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTC...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CAA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGGACCCATCAGTGTCCTaGGCCGGGCTAACTGGGCAG +
Preference number: 3 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWDPSVS*AGLTGQ
Trigger: CTGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTC...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CAA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCTCCGGTCCGCACCTaGGTCCAGCAGGGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPAPVRT*VQQGLP
Trigger: GGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGC...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR CCA 72 bp TGCTGGACAGACGGGCCGACAGCGGACGTTCGAGGGTaGCCTCTTCTCCTGCCCGGGGTCTCGGGCCTGACC +
Preference number: 3 (lower is better)
Translates to: CWTDGPTADVRG*PLLLPGVSGLT
Trigger: GGTCAGGCCCGAGACCCCGGGCAGGAGAAGAGGCCACCCTCGAACGTCCGCTGTCGGCCCGTCTGTCCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 72 bp GCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTaGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACG +
Preference number: 3 (lower is better)
Translates to: AAGPISVLGRAN*AGGRLRGPHTT
Trigger: CGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR-3UTR CAA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCGACCCATCAGTGTCCTaGGCCGGGCTAACTGGGCAG +
Preference number: 3 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAADPSVS*AGLTGQ
Trigger: CTGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTC...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CAA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTACCGGGAGGTGGGGGTaGGGCGGTGCGCGCCTGCAC +
Preference number: 3 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPTGRWG*GGARLH
Trigger: GTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGT...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CAA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGGAGGGATCTGAGAGGTaGAGCGGGCCCGTGATATCA +
Preference number: 3 (lower is better)
Translates to: EGLSPLESGGGGPRRREAEGSER*SGPVIS
Trigger: TGATATCACGGGCCCGCTCAACCTCTCAGATCCCTC...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR-3UTR CAA 90 bp AGGTGGCCTGTGCCCGCCAGTGCTGGCAGCGGCCAGGTCCCCAGGGGACCTGTGTACTGCGCGCGCTCGTaGTTTATGGTTAGCGGCGCC +
Preference number: 3 (lower is better)
Translates to: RWPVPASAGSGQVPRGPVYCARS*FMVSGA
Trigger: GGCGCCGCTAACCATAAACAACGAGCGCGCGCAGTA...CACAGGTCCCCTGGGGACCTGGCCGCTGCCAGCACTGGCGGGCACAGGCCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCAGGTGCAGGGCAGGGTaGAAGACAGTCCCGAGCCAG +
Preference number: 3 (lower is better)
Translates to: RARALGVLVLYKVAGRSRRCRAG*KTVPSQ
Trigger: CTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCT...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR TCA 72 bp GGCAAAGCCGGCCCACACCATGCCCAGGATGCGCGCTaGGAAGCTTCTGGGGGCGCCTTCCCCGATGCCGGA +
Preference number: 3 (lower is better)
Translates to: GKAGPHHAQDAR*EASGGAFPDAG
Trigger: TCCGGCATCGGGGAAGGCGCCCCCAGAAGCTTCTCAGCGCGCATCCTGGGCATGGTGTGGGCCGGCTTTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp AGGTGGCCTGTGCCCGCCAGTGCTGGCAGCGGCCAGGTCCCCAGGGGACCTGTGCCATTCTCGTGGGACTaGAGGATGGACAGGGAGACG +
Preference number: 3 (lower is better)
Translates to: RWPVPASAGSGQVPRGPVPFSWD*RMDRET
Trigger: CGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATGG...CACAGGTCCCCTGGGGACCTGGCCGCTGCCAGCACTGGCGGGCACAGGCCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGACCCATCAGTGTCCTaGGCCGGGCTAACTGGGCAG +
Preference number: 3 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPDPSVS*AGLTGQ
Trigger: CTGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CAA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTGACCCATCAGTGTCCTaGGCCGGGCTAACTGGGCAG +
Preference number: 3 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSDPSVS*AGLTGQ
Trigger: CTGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTC...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CAA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCAGGTGCAGGGCAGGGTaGAAGACAGTCCCGAGCCAG +
Preference number: 3 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPRCRAG*KTVPSQ
Trigger: CTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCT...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR-3UTR CAA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGGAGGGATCTGAGAGGTaGAGCGGGCCCGTGATATCA +
Preference number: 3 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPEGSER*SGPVIS
Trigger: TGATATCACGGGCCCGCTCAACCTCTCAGATCCCTC...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR-3UTR CAA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACAGGTGCAGGGCAGGGTaGAAGACAGTCCCGAGCCAG +
Preference number: 3 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDRCRAG*KTVPSQ
Trigger: CTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCT...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR GCA 72 bp CTGGGCACCAGGCCTCGGAGGGTGGCCTGCCCTACCTaGAGGTTCTTCCGCCACACGTTAACGGCGGCAAAG +
Preference number: 3 (lower is better)
Translates to: LGTRPRRVACPT*RFFRHTLTAAK
Trigger: CTTTGCCGCCGTTAACGTGTGGCGGAAGAACCTGCAGGTAGGGCAGGCCACCCTCCGAGGCCTGGTGCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR TCA 72 bp CCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTaGGAGGTTGAGCGGGCCCGTGATATCAGTGGGATG +
Preference number: 3 (lower is better)
Translates to: PGASHHGADRGI*EVERARDISGM
Trigger: CATCCCACTGATATCACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR CCA 72 bp TTGCCTTCCTATGGAATGGGTACCGGCGGGCGACTCTaGAGACAGAGGGGCCAGGCGGAGGCTTGGAGCAGG +
Preference number: 3 (lower is better)
Translates to: LPSYGMGTGGRL*RQRGQAEAWSR
Trigger: CCTGCTCCAAGCCTCCGCCTGGCCCCTCTGTCTCCAGAGTCGCCCGCCGGTACCCATTCCATAGGAAGGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp ACTCTGGCCTCAGGTCTGATGGCCAGGTGGCCTGTGCCCGCCAGTGCTGGCAGCTTCCAGGGGCTGTCTTaGCGCATGCCTATGCCGAAG +
Preference number: 3 (lower is better)
Translates to: TLASGLMARWPVPASAGSFQGLS*RMPMPK
Trigger: CTTCGGCATAGGCATGCGCAAAGACAGCCCCTGGAA...GCTGCCAGCACTGGCGGGCACAGGCCACCTGGCCATCAGACCTGAGGCCAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGGACCCATCAGTGTCCTaGGCCGGGCTAACTGGGCAG +
Preference number: 3 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGDPSVS*AGLTGQ
Trigger: CTGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTC...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR TCA 72 bp CCCTCAGGCCACACCAGCTGTCTGCGTGGAGGCCACTaGCCCCCAAGGGGCACACACCAAGATTCAGGAAGG +
Preference number: 3 (lower is better)
Translates to: PSGHTSCLRGGH*PPRGTHQDSGR
Trigger: CCTTCCTGAATCTTGGTGTGTGCCCCTTGGGGGTCAGTGGCCTCCACGCAGACAGCTGGTGTGGCCTGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 72 bp AGCCCCACCAGCAGCCACAGTGTGCTCTGGAACGGCTaGATGAACGAGTCCAGCGTGCTCCGGGGAATCTCC +
Preference number: 3 (lower is better)
Translates to: SPTSSHSVLWNG*MNESSVLRGIS
Trigger: GGAGATTCCCCGGAGCACGCTGGACTCGTTCATGCAGCCGTTCCAGAGCACACTGTGGCTGCTGGTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 72 bp TACAGGCGTCCCGAGGAGGAGGAGTCCTCTGAGGACTaGAGGAGTTGCCCCTCAGGCCACACCAGCTGTCTG +
Preference number: 3 (lower is better)
Translates to: YRRPEEEESSED*RSCPSGHTSCL
Trigger: CAGACAGCTGGTGTGGCCTGAGGGGCAACTCCTCCAGTCCTCAGAGGACTCCTCCTCCTCGGGACGCCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp CAGGACGCCCCAGGAGAACCACATGGCCGAGGACAGGGTCAGTGCGTCCTCCTCATGGTCCGTGCCAGCTaGATGAGCAGGTCGATGCAA +
Preference number: 3 (lower is better)
Translates to: QDAPGEPHGRGQGQCVLLMVRAS*MSRSMQ
Trigger: TTGCATCGACCTGCTCATCAAGCTGGCACGGACCAT...GAGGAGGACGCACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGGGCGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp AACCACATGGCCGAGGACAGGGTCAGTGCGTCCTCCTCCTCCTCCTCGCTGTTCTCCTGTGTGCCGAACTaGCCATCTGCCACCAGGTGC +
Preference number: 3 (lower is better)
Translates to: NHMAEDRVSASSSSSSLFSCVPN*PSATRC
Trigger: GCACCTGGTGGCAGATGGCAAGTTCGGCACACAGGA...GAACAGCGAGGAGGAGGAGGAGGACGCACTGACCCTGTCCTCGGCCATGTGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp CAGGACGCCCCAGGAGAACCACATGGCCGAGGACAGGGTCAGTGCGTCCTCCTCCGGGGAATCTCCTTCTaGACCAGAATAGTCAGGCCC +
Preference number: 3 (lower is better)
Translates to: QDAPGEPHGRGQGQCVLLRGISF*TRIVRP
Trigger: GGGCCTGACTATTCTGGTCAAGAAGGAGATTCCCCG...GAGGAGGACGCACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGGGCGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR TCA 72 bp GCGAGGCCTCGAACTCCAGCACCGCCGAGTCCCAGATaGAGGCATGCAGCTTGTTGTCTCTCACGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: ARPRTPAPPSPR*RHAACCLSRPG
Trigger: TCCAGGCCGTGAGAGACAACAAGCTGCATGCCTTCATCTGGGACTCGGCGGTGCTGGAGTTCGAGGCCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR TCA 72 bp GTGCCATACACAGGCGGGCCCCTGTCTTACCCTGCCTaGTTGCCTTCCTATGGAATGGGTACCGGCGGGCGA +
Preference number: 3 (lower is better)
Translates to: VPYTGGPLSYPA*LPSYGMGTGGR
Trigger: TCGCCCGCCGGTACCCATTCCATAGGAAGGCAATCAGGCAGGGTAAGACAGGGGCCCGCCTGTGTATGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 72 bp GGGTCGGCGGAGGGCAAAATGCATCTTGGACTCACGTaGCATACACAGGCGGGCCCCTGTCTTACCCTGCCT +
Preference number: 3 (lower is better)
Translates to: GSAEGKMHLGLT*HTQAGPCLTLP
Trigger: AGGCAGGGTAAGACAGGGGCCCGCCTGTGTATGGCACGTGAGTCCAAGATGCATTTTGCCCTCCGCCGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 72 bp AGGGTGTCAAGGGGCTTGGGTCGGCGGAGGGCAAAATaGATCTTGGACTCACGTGCCATACACAGGCGGGCC +
Preference number: 3 (lower is better)
Translates to: RVSRGLGRRRAK*ILDSRAIHRRA
Trigger: GGCCCGCCTGTGTATGGCACGTGAGTCCAAGATGCATTTTGCCCTCCGCCGACCCAAGCCCCTTGACACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 72 bp CCCTGTCTTACCCTGCCTGATTGCCTTCCTATGGAATaGGTACCGGCGGGCGACTCTGGAGACAGAGGGGCC +
Preference number: 3 (lower is better)
Translates to: PCLTLPDCLPME*VPAGDSGDRGA
Trigger: GGCCCCTCTGTCTCCAGAGTCGCCCGCCGGTACCCATTCCATAGGAAGGCAATCAGGCAGGGTAAGACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 72 bp CGGGCCCCTGTCTTACCCTGCCTGATTGCCTTCCTATaGAATGGGTACCGGCGGGCGACTCTGGAGACAGAG +
Preference number: 3 (lower is better)
Translates to: RAPVLPCLIAFL*NGYRRATLETE
Trigger: CTCTGTCTCCAGAGTCGCCCGCCGGTACCCATTCCATAGGAAGGCAATCAGGCAGGGTAAGACAGGGGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 72 bp TGGGCCGTGGCTGCCCTTGCTGGTGGCAAATTCTCATaGATACAACCTGGGCACCAGGCAGGACCGGACCTG +
Preference number: 3 (lower is better)
Translates to: WAVAALAGGKFS*IQPGHQAGPDL
Trigger: CAGGTCCGGTCCTGCCTGGTGCCCAGGTTGTATCCATGAGAATTTGCCACCAGCAAGGGCAGCCACGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp CAGGACGCCCCAGGAGAACCACATGGCCGAGGACAGGGTCAGTGCGTCCTCCTCATTGTAGATGCCCACTaGCACCAGCTTGCGGTTCTG +
Preference number: 3 (lower is better)
Translates to: QDAPGEPHGRGQGQCVLLIVDAH*HQLAVL
Trigger: CAGAACCGCAAGCTGGTGCAAGTGGGCATCTACAAT...GAGGAGGACGCACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGGGCGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp GCTCAGCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTTCACTCAGCGTGGGCTaGACGTACACGAAGGGCTCC +
Preference number: 3 (lower is better)
Translates to: AQLHLAPEVDIHGALLHRSLSVG*TYTKGS
Trigger: GGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTGA...ACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp TGTCAAGGGGCTTGGGTCGGCGGAGGGCAAAATGCATCTTGGACTCACGTGCCATCCTCGCTGTTCACCTaGAACCGGCCGAAGGGGCTG +
Preference number: 3 (lower is better)
Translates to: CQGAWVGGGQNASWTHVPSSLFT*NRPKGL
Trigger: CAGCCCCTTCGGCCGGTTCAAGGTGAACAGCGAGGA...TGGCACGTGAGTCCAAGATGCATTTTGCCCTCCGCCGACCCAAGCCCCTTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR TCA 72 bp TGGTTAGCGGCGCCACGATCATGTCTGCCTGCCCGCTaGGCAGCTCGCCCATCATCCCATTCCACTCCTTCT +
Preference number: 3 (lower is better)
Translates to: WLAAPRSCLPAR*AARPSSHSTPS
Trigger: AGAAGGAGTGGAATGGGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCGCCGCTAACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR TCA 72 bp CCACCAGCAGCCACAGTGTGCTCTGGAACGGCTGCATaGACGAGTCCAGCGTGCTCCGGGGAATCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: PPAATVCSGTAA*TSPACSGESPS
Trigger: AGAAGGAGATTCCCCGGAGCACGCTGGACTCGTTCATGCAGCCGTTCCAGAGCACACTGTGGCTGCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 72 bp TTCTTCCGCCACACGTTAACGGCGGCAAAGGCCAGCTaGATCTGCTTCCGGCGAGCATCCTTGTGCCGCTTG +
Preference number: 3 (lower is better)
Translates to: FFRHTLTAAKAS*ICFRRASLCRL
Trigger: CAAGCGGCACAAGGATGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGCCGTTAACGTGTGGCGGAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 72 bp CATACACAGGCGGGCCCCTGTCTTACCCTGCCTGATTaGCTTCCTATGGAATGGGTACCGGCGGGCGACTCT +
Preference number: 3 (lower is better)
Translates to: HTQAGPCLTLPD*LPMEWVPAGDS
Trigger: AGAGTCGCCCGCCGGTACCCATTCCATAGGAAGGCAATCAGGCAGGGTAAGACAGGGGCCCGCCTGTGTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 72 bp GGGGCACACACCAAGATTCAGGAAGGGGCCGAGGGCTaGAGGCAGGTGTCGAGGTGGAATTGGAGTGACAGA +
Preference number: 3 (lower is better)
Translates to: GAHTKIQEGAEG*RQVSRWNWSDR
Trigger: TCTGTCACTCCAATTCCACCTCGACACCTGCCTCCAGCCCTCGGCCCCTTCCTGAATCTTGGTGTGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR TCA 72 bp AGGGTCGCAGGGGCGTTGCTGCGCGAGTCACATTCCTaGTACCGAACCCACGTCTTGTCCAGGTCTTCCATG +
Preference number: 3 (lower is better)
Translates to: RVAGALLRESHS*YRTHVLSRSSM
Trigger: CATGGAAGACCTGGACAAGACGTGGGTTCGGTATCAGGAATGTGACTCGCGCAGCAACGCCCCTGCGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 72 bp CGTTCTGCTTCCAGGGGCTGTCTTTGCGCATGCCTATaGCGAAGCCCGAGCGGAAAAACAGCTCTCCAGTCG +
Preference number: 3 (lower is better)
Translates to: RSASRGCLCACL*RSPSGKTALQS
Trigger: CGACTGGAGAGCTGTTTTTCCGCTCGGGCTTCGGCATAGGCATGCGCAAAGACAGCCCCTGGAAGCAGAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 72 bp TGCCCTTGCTGGTGGCAAATTCTCATGGATACAACCTaGGCACCAGGCAGGACCGGACCTGGCCCAATTCGG +
Preference number: 3 (lower is better)
Translates to: CPCWWQILMDTT*APGRTGPGPIR
Trigger: CCGAATTGGGCCAGGTCCGGTCCTGCCTGGTGCCCAGGTTGTATCCATGAGAATTTGCCACCAGCAAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp ATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCCCATTCCACTCCTTCCCCACTTGCACCAGCTaGCGGTTCTGCAGGTTCATG +
Preference number: 3 (lower is better)
Translates to: IMSACPLSSSPIIPFHSFPTCTS*RFCRFM
Trigger: CATGAACCTGCAGAACCGCAAGCTGGTGCAAGTGGG...GAAGGAGTGGAATGGGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp CGGCACCCAGAGAAAGAGAAGAGACGGAGTGAACCGGAACTCGACCGCGGGCCAACTGTGAACTCCTCCTaGCATGTCCCATCACTCAGC +
Preference number: 3 (lower is better)
Translates to: RHPEKEKRRSEPELDRGPTVNSS*HVPSLS
Trigger: GCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGT...TGGCCCGCGGTCGAGTTCCGGTTCACTCCGTCTCTTCTCTTTCTCTGGGTGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp TTCCGCCACACGTTAACGGCGGCAAAGGCCAGCTGCATCTGCTTCCGGCGAGCATTCCACTCCTTCTTGTaGCTGTTGTTCACCCGCTCC +
Preference number: 3 (lower is better)
Translates to: FRHTLTAAKASCICFRRAFHSFL*LLFTRS
Trigger: GGAGCGGGTGAACAACAGCAACAAGAAGGAGTGGAA...TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGCCGTTAACGTGTGGCGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp TCTGCGTGGAGGCCACTGACCCCCAAGGGGCACACACCAAGATTCAGGAAGGGGAGGGCAAAATGCATCTaGGACTCACGTGCCATACAC +
Preference number: 3 (lower is better)
Translates to: SAWRPLTPKGHTPRFRKGRAKCI*DSRAIH
Trigger: GTGTATGGCACGTGAGTCCAAGATGCATTTTGCCCT...CCCCTTCCTGAATCTTGGTGTGTGCCCCTTGGGGGTCAGTGGCCTCCACGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR TCA 72 bp GGCGAGCATCCTTGTGCCGCTTGTAGGCAATCTCGATaGAAATCAGGAAGATCCCGGCCACGATGCCCCCAG +
Preference number: 3 (lower is better)
Translates to: GEHPCAACRQSR*KSGRSRPRCPQ
Trigger: CTGGGGGCATCGTGGCCGGGATCTTCCTGATTTTCATCGAGATTGCCTACAAGCGGCACAAGGATGCTCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 72 bp TTGTTTATGGTTAGCGGCGCCACGATCATGTCTGCCTaGCCGCTGAGCAGCTCGCCCATCATCCCATTCCAC +
Preference number: 3 (lower is better)
Translates to: LFMVSGATIMSA*PLSSSPIIPFH
Trigger: GTGGAATGGGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCGCCGCTAACCATAAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 72 bp TTCTCGTGGGACTTGAGGATGGACAGGGAGACGTTCTaGTTCCAGGGGCTGTCTTTGCGCATGCCTATGCCG +
Preference number: 3 (lower is better)
Translates to: FSWDLRMDRETF*FQGLSLRMPMP
Trigger: CGGCATAGGCATGCGCAAAGACAGCCCCTGGAAGCAGAACGTCTCCCTGTCCATCCTCAAGTCCCACGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 72 bp TGGAAAACTCGATGTACTGCGCGCGCTCGTTGTTTATaGTTAGCGGCGCCACGATCATGTCTGCCTGCCCGC +
Preference number: 3 (lower is better)
Translates to: WKTRCTARARCL*LAAPRSCLPAR
Trigger: GCGGGCAGGCAGACATGATCGTGGCGCCGCTAACCATAAACAACGAGCGCGCGCAGTACATCGAGTTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp CGGCCTGGATGGCCTCCGCCGCACTCTCGTAGTTGTGCTTCTCCATATGCCGGTTGGTACTTGAAGGGCTaGGAAAACTCGATGTACTGC +
Preference number: 3 (lower is better)
Translates to: RPGWPPPHSRSCASPYAGWYLKG*ENSMYC
Trigger: GCAGTACATCGAGTTTTCCAAGCCCTTCAAGTACCA...ACCGGCATATGGAGAAGCACAACTACGAGAGTGCGGCGGAGGCCATCCAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp GGTGCTCTCCCCCTTACCGTGTCTTTGGAGGACCTACGCCTCTTGAAGCTGGAAGTCAGGCCCTGGTACTaGAAGGGCTTGGAAAACTCG +
Preference number: 3 (lower is better)
Translates to: GALPLTVSLEDLRLLKLEVRPWY*KGLENS
Trigger: CGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGAC...TTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGGTAAGGGGGAGAGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR TCA 72 bp ACTCCTCCTTGCATGTCCCATCACTCAGCGTGGGCTTaGCGTACACGAAGGGCTCCTGGTGGATCGTCACAA +
Preference number: 3 (lower is better)
Translates to: TPPCMSHHSAWA*RTRRAPGGSSQ
Trigger: TTGTGACGATCCACCAGGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTGATGGGACATGCAAGGAGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 72 bp GTTGTTCACCCGCTCCTGTGTGCCGAACTTGCCATCTaGCACCAGGTGCACCTCGTAGGTGAAGTTCATGGT +
Preference number: 3 (lower is better)
Translates to: VVHPLLCAELAI*HQVHLVGEVHG
Trigger: ACCATGAACTTCACCTACGAGGTGCACCTGGTGGCAGATGGCAAGTTCGGCACACAGGAGCGGGTGAACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 72 bp CCCTGGTACTTGAAGGGCTTGGAAAACTCGATGTACTaGGCGCGCTCGTTGTTTATGGTTAGCGGCGCCACG +
Preference number: 3 (lower is better)
Translates to: PWYLKGLENSMY*ARSLFMVSGAT
Trigger: CGTGGCGCCGCTAACCATAAACAACGAGCGCGCGCAGTACATCGAGTTTTCCAAGCCCTTCAAGTACCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 72 bp TGGTGGATCGTCACAATCTTCAGTCTGGTGGACATCTaGTACCCTCGAGGCTTCTCTGTCTCTCCGCCTGGC +
Preference number: 3 (lower is better)
Translates to: WWIVTIFSLVDI*YPRGFSVSPPG
Trigger: GCCAGGCGGAGAGACAGAGAAGCCTCGAGGGTACCAGATGTCCACCAGACTGAAGATTGTGACGATCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 72 bp CTCAGCGTGGGCTTGACGTACACGAAGGGCTCCTGGTaGATCGTCACAATCTTCAGTCTGGTGGACATCTGG +
Preference number: 3 (lower is better)
Translates to: LSVGLTYTKGSW*IVTIFSLVDIW
Trigger: CCAGATGTCCACCAGACTGAAGATTGTGACGATCCACCAGGAGCCCTTCGTGTACGTCAAGCCCACGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR-3UTR CAA 90 bp GTGATAGCCCTAAATGTGGCTTTCTTTTTAGGGTCAGGCTCTGCTCTACCACTCAGGGTCGCAGGGGCGTaGCTGCGCGAGTCACATTCC +
Preference number: 3 (lower is better)
Translates to: VIALNVAFFLGSGSALPLRVAGA*LRESHS
Trigger: GGAATGTGACTCGCGCAGCAACGCCCCTGCGACCCT...GAGTGGTAGAGCAGAGCCTGACCCTAAAAAGAAAGCCACATTTAGGGCTATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 72 bp CACCAGGTGCACCTCGTAGGTGAAGTTCATGGTCCGTaGCAGCTTGATGAGCAGGTCGATGCAAAAGCCGTA +
Preference number: 3 (lower is better)
Translates to: HQVHLVGEVHGP*QLDEQVDAKAV
Trigger: TACGGCTTTTGCATCGACCTGCTCATCAAGCTGGCACGGACCATGAACTTCACCTACGAGGTGCACCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 72 bp CATCTGGTACCCTCGAGGCTTCTCTGTCTCTCCGCCTaGCCAGATGATCTTCCTGTCATTAGGGATGACGTG +
Preference number: 3 (lower is better)
Translates to: HLVPSRLLCLSA*PDDLPVIRDDV
Trigger: CACGTCATCCCTAATGACAGGAAGATCATCTGGCCAGGCGGAGAGACAGAGAAGCCTCGAGGGTACCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 72 bp TCACTCAGCGTGGGCTTGACGTACACGAAGGGCTCCTaGTGGATCGTCACAATCTTCAGTCTGGTGGACATC +
Preference number: 3 (lower is better)
Translates to: SLSVGLTYTKGS*WIVTIFSLVDI
Trigger: GATGTCCACCAGACTGAAGATTGTGACGATCCACCAGGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 72 bp TCTCGTAGTTGTGCTTCTCCATATGCCGGTACATGGTaGTCAGCTCCACCTGGCGCCGGAAGTAGATATCCA +
Preference number: 3 (lower is better)
Translates to: SRSCASPYAGTW*SAPPGAGSRYP
Trigger: TGGATATCTACTTCCGGCGCCAGGTGGAGCTGAGCACCATGTACCGGCATATGGAGAAGCACAACTACGAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 72 bp CACTCTCGTAGTTGTGCTTCTCCATATGCCGGTACATaGTGCTCAGCTCCACCTGGCGCCGGAAGTAGATAT +
Preference number: 3 (lower is better)
Translates to: HSRSCASPYAGT*CSAPPGAGSRY
Trigger: ATATCTACTTCCGGCGCCAGGTGGAGCTGAGCACCATGTACCGGCATATGGAGAAGCACAACTACGAGAGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR GCA 72 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTaGTGCAAAATAGAAATACACAGACAAGGCGCCCGT +
Preference number: 3 (lower is better)
Translates to: RLSGPVISVGWY*CKIEIHRQGAR
Trigger: ACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR-3UTR CAA 90 bp GTGATAGCCCTAAATGTGGCTTTCTTTTTAGGGTCAGGCTCTGCTCTACCACTCGTGCAGATCACCTTCTaGACTGGGTCGCCGTTGACT +
Preference number: 3 (lower is better)
Translates to: VIALNVAFFLGSGSALPLVQITF*TGSPLT
Trigger: AGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCAC...GAGTGGTAGAGCAGAGCCTGACCCTAAAAAGAAAGCCACATTTAGGGCTATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 72 bp CGGGGAATCTCCTTCTTGACCAGAATAGTCAGGCCCTaGTACTTGAAGGGCTTGGAAAACTCGATGTACTGC +
Preference number: 3 (lower is better)
Translates to: RGISFLTRIVRP*YLKGLENSMYC
Trigger: GCAGTACATCGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCTGGTCAAGAAGGAGATTCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CCA 72 bp TCTGAGAGGTTGAGCGGGCCCGTGATATCAGTGGGATaGTACTGCTGCAAAATAGAAATACACAGACAAGGC +
Preference number: 3 (lower is better)
Translates to: SERLSGPVISVG*YCCKIEIHRQG
Trigger: GCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCTCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGGTGGGGGTTGGGCGGTaGGCGCCTGCACCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSVGVGR*APAPWG
Trigger: TCCCCAGGGTGCAGGCGCGCACCGCCCAACCCCCAC...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGGGCGGCGGGAGGCGCTaGCAGCTGGGAAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSGGGRR*QLGSQG
Trigger: TCCCTGACTTCCCAGCTGGCAGCGCCTCCCGCCGCC...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGGCCGCCCGGCCCTCGTaGTCGTCGCTGACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREAAARPS*SSLTSR
Trigger: CCTGCTGGTCAGCGACGACCACGAGGGCCGGGCGGC...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGCAGCCCTCTCGAGTCTaGAGGAGGCGGCCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSQPSRV*RRRPEA
Trigger: CGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTG...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGCGGGGAGGCCCGTTCTaGGCTGCAGGCCGGACGAGG +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREARGGPF*AAGRTR
Trigger: CCTCGTCCGGCCTGCAGCCCAGAACGGGCCTCCCCG...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGGCCCAGGATGCGCGCTaGGAAGCTTCTGGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREAAQDAR*EASGGA
Trigger: GGCGCCCCCAGAAGCTTCTCAGCGCGCATCCTGGGC...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCCGTGTGGCGGGGGCTaGCCGGCGACGTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGPCGGG*PATCRW
Trigger: CCAACGACACGTCGCCGGGCAGCCCCCGCCACACGG...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGCAGCCGACTCAGCTCTaGCCCGTCCTCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSQPTQL*PVLSRS
Trigger: GGAGCGGCTGAGGACGGGGCAGAGCTGAGTCGGCTG...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGGTGGGGGTTGGGCGGTaGGCGCCTGCACCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWVGVGR*APAPWG
Trigger: TCCCCAGGGTGCAGGCGCGCACCGCCCAACCCCCAC...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCGCCGCCCGGCCCTCGTaGTCGTCGCTGACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGAARPS*SSLTSR
Trigger: CCTGCTGGTCAGCGACGACCACGAGGGCCGGGCGGC...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGGCCGCCCGGCCCTCGTaGTCGTCGCTGACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARAARPS*SSLTSR
Trigger: CCTGCTGGTCAGCGACGACCACGAGGGCCGGGCGGC...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGAGCTCGTGCACGGCCTaGGCCACCACGCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWSSCTA*ATTPTA
Trigger: CGCCGTGGGCGTGGTGGCCCAGGCCGTGCACGAGCT...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCAGCTCGTGCACGGCCTaGGCCACCACGCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGSSCTA*ATTPTA
Trigger: CGCCGTGGGCGTGGTGGCCCAGGCCGTGCACGAGCT...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCAGCTCGTGCACGGCCTaGGCCACCACGCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSSSCTA*ATTPTA
Trigger: CGCCGTGGGCGTGGTGGCCCAGGCCGTGCACGAGCT...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGCCCGAGGATGCCGTCTaGGGCGTAGCGCAGGGCGTT +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSPEDAV*GVAQGV
Trigger: AACGCCCTGCGCTACGCCCCAGACGGCATCCTCGGG...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGCTCCGGTCCGCACCTTaGTCCAGCAGGGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREALRSAP*SSRGCP
Trigger: CGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAG...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCGCCAGCCCCGGCGTGTaGGGTCAAGGGGCAGACGGG +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGASPGV*GQGADG
Trigger: CCCGTCTGCCCCTTGACCCCACACGCCGGGGCTGGC...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGGCCAGCCCCGGCGTGTaGGGTCAAGGGGCAGACGGG +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWASPGV*GQGADG
Trigger: CCCGTCTGCCCCTTGACCCCACACGCCGGGGCTGGC...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGAGTCAGGGACGGCCGTaGGGGAGGGCAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWSQGRP*GRAGPA
Trigger: GGCTGGCCCTGCCCTCCCCCACGGCCGTCCCTGACT...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCGGGGAGGCCCGTTCTaGGCTGCAGGCCGGACGAGG +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGRGGPF*AAGRTR
Trigger: CCTCGTCCGGCCTGCAGCCCAGAACGGGCCTCCCCG...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCGTCTCCAGGCGTTTCTaGGCCGCCCGGCCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGVSRRF*AARPSW
Trigger: CCACGAGGGCCGGGCGGCTCAGAAACGCCTGGAGAC...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGCGCCCACGGCGTCGCTaGTGTGGGCCGACTCGTTCT +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREARPRRR*CGPTRS
Trigger: AGAACGAGTCGGCCCACATCAGCGACGCCGTGGGCG...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGTGTCTGCCTGCCCGCTaGGCAGCTCGCCCATCATCC +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSCLPAR*AARPSS
Trigger: GGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACA...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGGCCCAGGATGCGCGCTaGGAAGCTTCTGGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWAQDAR*EASGGA
Trigger: GGCGCCCCCAGAAGCTTCTCAGCGCGCATCCTGGGC...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGTTCTCGAGGAGCTCGTaGACGGCCTGGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSFSRSS*TAWATT
Trigger: CGTGGTGGCCCAGGCCGTGCACGAGCTCCTCGAGAA...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCCCGTGTGGCGGGGGCTaGCCGGCGACGTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPPCGGG*PATCRW
Trigger: CCAACGACACGTCGCCGGGCAGCCCCCGCCACACGG...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTCCGTGTGGCGGGGGCTaGCCGGCGACGTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSPCGGG*PATCRW
Trigger: CCAACGACACGTCGCCGGGCAGCCCCCGCCACACGG...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTTCTGCCGGAGCGCCCTaGGGCCCTGCCCAGCCGACT +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSSAGAP*GPAQPT
Trigger: AGTCGGCTGGGCAGGGCCGCAGGGCGCTCCGGCAGA...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCTCTGCCGGAGCGCCCTaGGGCCCTGCCCAGCCGACT +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPSAGAP*GPAQPT
Trigger: AGTCGGCTGGGCAGGGCCGCAGGGCGCTCCGGCAGA...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGGAGACCCCAGGGCCCTaGCTCTGCCGGAGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPETPGP*LCRSAL
Trigger: CAGGGCGCTCCGGCAGAGGCAGGGCCCTGGGGTCTC...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCGTGGGGGTTGGGCGGTaGGCGCCTGCACCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LGRWAPPGASHHGADRGIVGVGR*APAPWG
Trigger: TCCCCAGGGTGCAGGCGCGCACCGCCCAACCCCCAC...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGTGGGGGTTGGGCGGTaGGCGCCTGCACCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQVGVGR*APAPWG
Trigger: TCCCCAGGGTGCAGGCGCGCACCGCCCAACCCCCAC...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTGTGGGGGTTGGGCGGTaGGCGCCTGCACCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSVGVGR*APAPWG
Trigger: TCCCCAGGGTGCAGGCGCGCACCGCCCAACCCCCAC...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGAGCTCGTGCACGGCCTaGGCCACCACGCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRSSCTA*ATTPTA
Trigger: CGCCGTGGGCGTGGTGGCCCAGGCCGTGCACGAGCT...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCAGCTCGTGCACGGCCTaGGCCACCACGCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: LGRWAPPGASHHGADRGISSCTA*ATTPTA
Trigger: CGCCGTGGGCGTGGTGGCCCAGGCCGTGCACGAGCT...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTGGCCGGGCTAACTaGGCAGGTGGGCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGLGRAN*AGGRLR
Trigger: CCGGAGGCGCCCACCTGCCCAGTTAGCCCGGCCAAG...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGCTCCGGTCCGCACCTTaGTCCAGCAGGGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWLRSAP*SSRGCP
Trigger: CGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAG...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCCCAAGCCCCTCCGCCTaGGGCCAGTTAGCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSPSPSA*GQLAPA
Trigger: AGCGGGGGCTAACTGGCCCCAGGCGGAGGGGCTTGG...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCGGGGCAGACGGGGTGTaGGTGGGCGGTGCCGCAAGA +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSGADGV*VGGAAR
Trigger: TCTTGCGGCACCGCCCACCCACACCCCGTCTGCCCC...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCGCCAGCCCCGGCGTGTaGGGTCAAGGGGCAGACGGG +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAASPGV*GQGADG
Trigger: CCCGTCTGCCCCTTGACCCCACACGCCGGGGCTGGC...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGAGTCAGGGACGGCCGTaGGGGAGGGCAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRSQGRP*GRAGPA
Trigger: GGCTGGCCCTGCCCTCCCCCACGGCCGTCCCTGACT...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGAGTCAGGGACGGCCGTaGGGGAGGGCAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQSQGRP*GRAGPA
Trigger: GGCTGGCCCTGCCCTCCCCCACGGCCGTCCCTGACT...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGCAGCCCTCTCGAGTCTaGAGGAGGCGGCCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWQPSRV*RRRPEA
Trigger: CGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTG...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCCAGCCCTCTCGAGTCTaGAGGAGGCGGCCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSQPSRV*RRRPEA
Trigger: CGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTG...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGCGGGGAGGCCCGTTCTaGGCTGCAGGCCGGACGAGG +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPRGGPF*AAGRTR
Trigger: CCTCGTCCGGCCTGCAGCCCAGAACGGGCCTCCCCG...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGCGGGGAGGCCCGTTCTaGGCTGCAGGCCGGACGAGG +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQRGGPF*AAGRTR
Trigger: CCTCGTCCGGCCTGCAGCCCAGAACGGGCCTCCCCG...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGGCATACACCGGGAGGTaGGGGTTGGGCGGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARAYTGR*GLGGAR
Trigger: GCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGC...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCGCATACACCGGGAGGTaGGGGTTGGGCGGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGAYTGR*GLGGAR
Trigger: GCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGC...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCGTCTCCAGGCGTTTCTaGGCCGCCCGGCCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAVSRRF*AARPSW
Trigger: CCACGAGGGCCGGGCGGCTCAGAAACGCCTGGAGAC...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTGTCTCCAGGCGTTTCTaGGCCGCCCGGCCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSVSRRF*AARPSW
Trigger: CCACGAGGGCCGGGCGGCTCAGAAACGCCTGGAGAC...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCCGCCCACGGCGTCGCTaGTGTGGGCCGACTCGTTCT +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSRPRRR*CGPTRS
Trigger: AGAACGAGTCGGCCCACATCAGCGACGCCGTGGGCG...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGCCCGCGGCGGGTCGGTaGTGTTCTCCTTCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREAPAAGR*CSPSRG
Trigger: TCCTCGAGAAGGAGAACATCACCGACCCGCCGCGGG...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGTGTCTGCCTGCCCGCTaGGCAGCTCGCCCATCATCC +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREACLPAR*AARPSS
Trigger: GGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACA...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCCCCGATGCCGGAGTTaGGCAGGACGCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARPRCRS*AGRPRR
Trigger: TCTCCTGGGGCGTCCTGCTCAACTCCGGCATCGGGG...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGATCACGGCCACCACGTaGACCGACAGCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREAITATT*TDSPTS
Trigger: GCTGGTGGGGCTGTCGGTGCACGTGGTGGCCGTGAT...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCCAGCCGACTCAGCTCTaGCCCGTCCTCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSQPTQL*PVLSRS
Trigger: GGAGCGGCTGAGGACGGGGCAGAGCTGAGTCGGCTG...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGTCTGCCGGAGCGCCCTaGGGCCCTGCCCAGCCGACT +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGSAGAP*GPAQPT
Trigger: AGTCGGCTGGGCAGGGCCGCAGGGCGCTCCGGCAGA...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGTGGGGCTGCCGTCTCTaGTCCAAGCCCCTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARWGCRL*SKPLRL
Trigger: CAGGCGGAGGGGCTTGGAGCAGAGACGGCAGCCCCA...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGGCGGCGGGAGGCGCTaGCAGCTGGGAAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPGGGRR*QLGSQG
Trigger: TCCCTGACTTCCCAGCTGGCAGCGCCTCCCGCCGCC...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTGGCGGCGGGAGGCGCTaGCAGCTGGGAAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSGGGRR*QLGSQG
Trigger: TCCCTGACTTCCCAGCTGGCAGCGCCTCCCGCCGCC...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGGGTGGCGCTCTCCCGTaGCCAAGGTGCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPGGALP*PRCRAG
Trigger: CCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACC...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGGCCGCCCGGCCCTCGTaGTCGTCGCTGACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGAARPS*SSLTSR
Trigger: CCTGCTGGTCAGCGACGACCACGAGGGCCGGGCGGC...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGACGGCGTCGCTGATGTaGGCCGACTCGTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSTASLM*ADSFLP
Trigger: CGGCAAGAACGAGTCGGCCCACATCAGCGACGCCGT...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGTTGTCTCTCACGGCCTaGATGGCCTCCGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSLSLTA*MASAAL
Trigger: GAGTGCGGCGGAGGCCATCCAGGCCGTGAGAGACAA...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCCTTGGCCGGGCTAACTaGGCAGGTGGGCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LGRWAPPGASHHGADRGILGRAN*AGGRLR
Trigger: CCGGAGGCGCCCACCTGCCCAGTTAGCCCGGCCAAG...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCTTGGCCGGGCTAACTaGGCAGGTGGGCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRLGRAN*AGGRLR
Trigger: CCGGAGGCGCCCACCTGCCCAGTTAGCCCGGCCAAG...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGCTTGGCCGGGCTAACTaGGCAGGTGGGCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPLGRAN*AGGRLR
Trigger: CCGGAGGCGCCCACCTGCCCAGTTAGCCCGGCCAAG...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCCTCCGGTCCGCACCTTaGTCCAGCAGGGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LGRWAPPGASHHGADRGILRSAP*SSRGCP
Trigger: CGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAG...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGCACTGTGGCTCAGGCTaGTGCTGCGGGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSHCGSG*CCGKDG
Trigger: CCCATCCTTCCCGCAGCACCAGCCTGAGCCACAGTG...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGGGGCAGACGGGGTGTaGGTGGGCGGTGCCGCAAGA +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRGADGV*VGGAAR
Trigger: TCTTGCGGCACCGCCCACCCACACCCCGTCTGCCCC...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
73% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGGGCAGACGGGGTGTaGGTGGGCGGTGCCGCAAGA +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQGADGV*VGGAAR
Trigger: TCTTGCGGCACCGCCCACCCACACCCCGTCTGCCCC...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCAGTCAGGGACGGCCGTaGGGGAGGGCAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRSQGRP*GRAGPA
Trigger: GGCTGGCCCTGCCCTCCCCCACGGCCGTCCCTGACT...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTCAGCCCTCTCGAGTCTaGAGGAGGCGGCCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSQPSRV*RRRPEA
Trigger: CGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTG...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTGCATACACCGGGAGGTaGGGGTTGGGCGGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSAYTGR*GLGGAR
Trigger: GCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGC...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGAGACCTGGCTGGAGATaGGGTCCTCGCACACCGACA +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSRPGWR*GPRTPT
Trigger: TGTCGGTGTGCGAGGACCTCATCTCCAGCCAGGTCT...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCGTCTCCAGGCGTTTCTaGGCCGCCCGGCCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRVSRRF*AARPSW
Trigger: CCACGAGGGCCGGGCGGCTCAGAAACGCCTGGAGAC...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCCGCCCACGGCGTCGCTaGTGTGGGCCGACTCGTTCT +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPRPRRR*CGPTRS
Trigger: AGAACGAGTCGGCCCACATCAGCGACGCCGTGGGCG...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCCCCCGATGCCGGAGTTaGGCAGGACGCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LGRWAPPGASHHGADRGIPRCRS*AGRPRR
Trigger: TCTCCTGGGGCGTCCTGCTCAACTCCGGCATCGGGG...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCCCCGATGCCGGAGTTaGGCAGGACGCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAPRCRS*AGRPRR
Trigger: TCTCCTGGGGCGTCCTGCTCAACTCCGGCATCGGGG...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
72% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGGCCCAGGATGCGCGCTaGGAAGCTTCTGGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGAQDAR*EASGGA
Trigger: GGCGCCCCCAGAAGCTTCTCAGCGCGCATCCTGGGC...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGCCCCAGCTACCAGCATaGAGACCCCGGCCATGTTCT +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSPQLPA*RPRPCS
Trigger: AGAACATGGCCGGGGTCTTCATGCTGGTAGCTGGGG...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGGCTGACCGAGGGATCTaGGAGGTTGAGCGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWADRGI*EVERAR
Trigger: ACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGC...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCGGTGCAGGGCAGGGTTaGAGACAGTCCCGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGGAGQG*RQSRAS
Trigger: GCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACC...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTTCAGCAGGCGCATGGTaGTCATGGGCTCGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSSAGAW*SWARAA
Trigger: CGCGGCCCGAGCCCATGAGCACCATGCGCCTGCTGA...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGGCCCCAGCACGGGTATaGGGTAGAAGCCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREAAPARV*GRSRLC
Trigger: ACACAGCCGGCTTCTACCGCATACCCGTGCTGGGGC...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGCCGAGTAGATGGACATaGGGGTGGTCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSPSRWT*GWSAPA
Trigger: TGCTGGGGCTGACCACCCGCATGTCCATCTACTCGG...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGAGTAGGGCGGCACGGTaGGCAGGAAGCTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREASRAAR*AGSSGG
Trigger: TCCACCTGAGCTTCCTGCGCACCGTGCCGCCCTACT...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGTCCAGATGTTGGTGTTaGCCACGCAGCCCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWSRCWC*PRSPAA
Trigger: CGCCGCGGGGCTGCGTGGGCAACACCAACATCTGGA...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGTCCAGATGTTGGTGTTaGCCACGCAGCCCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARSRCWC*PRSPAA
Trigger: CGCCGCGGGGCTGCGTGGGCAACACCAACATCTGGA...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCCGTGTGGCGGGGGCTaGCCGGCGACGTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPPCGGG*PATCRW
Trigger: CCAACGACACGTCGCCGGGCAGCCCCCGCCACACGG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACCGTGTGGCGGGGGCTaGCCGGCGACGTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGPCGGG*PATCRW
Trigger: CCAACGACACGTCGCCGGGCAGCCCCCGCCACACGG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGCGCCACGATCATGTCTaGCTGCCCGCTGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREARHDHV*LPAEQL
Trigger: GAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCG...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCATCACGGCCACCACGTaGACCGACAGCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGITATT*TDSPTS
Trigger: GCTGGTGGGGCTGTCGGTGCACGTGGTGGCCGTGAT...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGATCACGGCCACCACGTaGACCGACAGCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWITATT*TDSPTS
Trigger: GCTGGTGGGGCTGTCGGTGCACGTGGTGGCCGTGAT...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGCGAGGACAGGGTCAGTaGGTCCTCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREARGQGQ*VLLLLL
Trigger: GAGGAGGAGGAGGAGGACGCACTGACCCTGTCCTCG...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCAGCCGACTCAGCTCTaGCCCGTCCTCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRQPTQL*PVLSRS
Trigger: GGAGCGGCTGAGGACGGGGCAGAGCTGAGTCGGCTG...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTGAGACCCCAGGGCCCTaGCTCTGCCGGAGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSETPGP*LCRSAL
Trigger: CAGGGCGCTCCGGCAGAGGCAGGGCCCTGGGGTCTC...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGTGGGGCTGCCGTCTCTaGTCCAAGCCCCTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRWGCRL*SKPLRL
Trigger: CAGGCGGAGGGGCTTGGAGCAGAGACGGCAGCCCCA...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCTGGGGCTGCCGTCTCTaGTCCAAGCCCCTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPWGCRL*SKPLRL
Trigger: CAGGCGGAGGGGCTTGGAGCAGAGACGGCAGCCCCA...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCGGGAAGGATGGGGCTaGCGTCTCTGCTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGREGWG*RLCSKP
Trigger: GGGCTTGGAGCAGAGACGGCAGCCCCATCCTTCCCG...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGTGTGGCTCAGGCTGGTaGTGCGGGAAGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREACGSGW*CGKDGA
Trigger: AGCCCCATCCTTCCCGCAGCACCAGCCTGAGCCACA...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGAGGCCCGTTCTGGGCTaGAGGCCGGACGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRRPVLG*RPDEER
Trigger: CCTCTCCTCGTCCGGCCTGCAGCCCAGAACGGGCCT...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGAGGCCCGTTCTGGGCTaGAGGCCGGACGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPRPVLG*RPDEER
Trigger: CCTCTCCTCGTCCGGCCTGCAGCCCAGAACGGGCCT...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCAGGCCCGTTCTGGGCTaGAGGCCGGACGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAARPVLG*RPDEER
Trigger: CCTCTCCTCGTCCGGCCTGCAGCCCAGAACGGGCCT...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCGGTGGCGCTCTCCCGTaGCCAAGGTGCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRGGALP*PRCRAG
Trigger: CCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACC...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCGGCGCATGGTGCTCATaGGCTCGGGCCGCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPGAWCS*ARAAGL
Trigger: CAGGCCCGCGGCCCGAGCCCATGAGCACCATGCGCC...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGGGGGTGGGAGTGAAGTaGTCGTTGGGGGTAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSGVGVK*SLGVGG
Trigger: TCCACCTACCCCCAACGACCACTTCACTCCCACCCC...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGCCGCCCGGCCCTCGTaGTCGTCGCTGACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPAARPS*SSLTSR
Trigger: CCTGCTGGTCAGCGACGACCACGAGGGCCGGGCGGC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGAGCTCGTGCACGGCCTaGGCCACCACGCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLSSCTA*ATTPTA
Trigger: CGCCGTGGGCGTGGTGGCCCAGGCCGTGCACGAGCT...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTAGCTCGTGCACGGCCTaGGCCACCACGCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSSSCTA*ATTPTA
Trigger: CGCCGTGGGCGTGGTGGCCCAGGCCGTGCACGAGCT...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCCGAGGATGCCGTCTaGGGCGTAGCGCAGGGCGTT +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRPEDAV*GVAQGV
Trigger: AACGCCCTGCGCTACGCCCCAGACGGCATCCTCGGG...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGCCCGAGGATGCCGTCTaGGGCGTAGCGCAGGGCGTT +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQPEDAV*GVAQGV
Trigger: AACGCCCTGCGCTACGCCCCAGACGGCATCCTCGGG...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCCCGAGGATGCCGTCTaGGGCGTAGCGCAGGGCGTT +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAPEDAV*GVAQGV
Trigger: AACGCCCTGCGCTACGCCCCAGACGGCATCCTCGGG...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCAGGGTGGGCAGTCTCTaGGGCGGGTGGGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPRVGSL*GGWASL
Trigger: GAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCT...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGCAGACGGGGTGTGGGTaGGCGGTGCCGCAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWQTGCG*AVPQEE
Trigger: CTCTTCTTGCGGCACCGCCCACCCACACCCCGTCTG...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGACGGGGTGTGGGTaGGCGGTGCCGCAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARQTGCG*AVPQEE
Trigger: CTCTTCTTGCGGCACCGCCCACCCACACCCCGTCTG...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTAGTCAGGGACGGCCGTaGGGGAGGGCAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSSQGRP*GRAGPA
Trigger: GGCTGGCCCTGCCCTCCCCCACGGCCGTCCCTGACT...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCAGTCAGGGACGGCCGTaGGGGAGGGCAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPSQGRP*GRAGPA
Trigger: GGCTGGCCCTGCCCTCCCCCACGGCCGTCCCTGACT...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCCAGCCCTCTCGAGTCTaGAGGAGGCGGCCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRQPSRV*RRRPEA
Trigger: CGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTG...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACGGGGAGGCCCGTTCTaGGCTGCAGGCCGGACGAGG +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGRGGPF*AAGRTR
Trigger: CCTCGTCCGGCCTGCAGCCCAGAACGGGCCTCCCCG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCCGGGGAGGCCCGTTCTaGGCTGCAGGCCGGACGAGG +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPRGGPF*AAGRTR
Trigger: CCTCGTCCGGCCTGCAGCCCAGAACGGGCCTCCCCG...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGTGGTTCTGTACAAGGTaGCGGGCCGGTCACGCACCC +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREAWFCTR*RAGHAP
Trigger: GGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCA...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR CAA 72 bp GGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTaGAAGACAGTCCCGAGCCAGCGTCCGGGGACCCCC +
Preference number: 4 (lower is better)
Translates to: GGALPCPRCRAG*KTVPSQRPGTP
Trigger: GGGGGTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGCCCGCGGCGGGTCGGTaGTGTTCTCCTTCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQPAAGR*CSPSRG
Trigger: TCCTCGAGAAGGAGAACATCACCGACCCGCCGCGGG...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGACATCAGCACTCTCTTaGAGAGCGGCCCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSTSALS*RAARSS
Trigger: GGAAGACCGGGCCGCTCTTCAAGAGAGTGCTGATGT...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGGGTGCACCTCGTAGGTaGAGTTCATGGTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSGAPRR*SSWSVP
Trigger: TGGCACGGACCATGAACTTCACCTACGAGGTGCACC...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTGGTGCAGGGCAGGGTTaGAGACAGTCCCGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSGAGQG*RQSRAS
Trigger: GCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACC...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCGGTGCAGGGCAGGGTTaGAGACAGTCCCGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAGAGQG*RQSRAS
Trigger: GCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACC...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGTGCAGGGCAGGGTTaGAGACAGTCCCGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQGAGQG*RQSRAS
Trigger: GCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACC...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGGCCTCGCGGAACATCTaGTCGTGCTTCCGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARASRNI*SCFRVL
Trigger: GAGCACGCGGAAGCACGAGCAGATGTTCCGCGAGGC...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCGCCCCAGCACGGGTATaGGGTAGAAGCCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGAPARV*GRSRLC
Trigger: ACACAGCCGGCTTCTACCGCATACCCGTGCTGGGGC...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGGCCCCAGCACGGGTATaGGGTAGAAGCCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWAPARV*GRSRLC
Trigger: ACACAGCCGGCTTCTACCGCATACCCGTGCTGGGGC...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGTTCTCGAGGAGCTCGTaGACGGCCTGGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQFSRSS*TAWATT
Trigger: CGTGGTGGCCCAGGCCGTGCACGAGCTCCTCGAGAA...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGTCCAGATGTTGGTGTTaGCCACGCAGCCCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRSRCWC*PRSPAA
Trigger: CGCCGCGGGGCTGCGTGGGCAACACCAACATCTGGA...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGGCCGAACTTGCCATCTaGCACCAGGTGCACCTCGTA +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSAELAI*HQVHLV
Trigger: TACGAGGTGCACCTGGTGGCAGATGGCAAGTTCGGC...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGACGATCATGTCTGCCTaGCCGCTGAGCAGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARTIMSA*PLSSSP
Trigger: GGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGT...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGCGCCACGATCATGTCTaGCTGCCCGCTGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWRHDHV*LPAEQL
Trigger: GAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCG...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCGCCACGATCATGTCTaGCTGCCCGCTGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARRHDHV*LPAEQL
Trigger: GAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCG...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGATCACGGCCACCACGTaGACCGACAGCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRITATT*TDSPTS
Trigger: GCTGGTGGGGCTGTCGGTGCACGTGGTGGCCGTGAT...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCGAGGACAGGGTCAGTaGGTCCTCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGRGQGQ*VLLLLL
Trigger: GAGGAGGAGGAGGAGGACGCACTGACCCTGTCCTCG...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGAGCCGGCCCACACCATaGCCAGGATGCGCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQSRPTP*PGCALR
Trigger: TCTCAGCGCGCATCCTGGGCATGGTGTGGGCCGGCT...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGACCAGGTCGCACTTCTaGGAGGCCTCGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREATRSHF*EASNSS
Trigger: GCTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGT...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGGGCTGTCTTTGCGCATaGCTATGCCGAAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREAGCLCA*LCRSPS
Trigger: GCTCGGGCTTCGGCATAGGCATGCGCAAAGACAGCC...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCGGGTCGCAGGGGCGTTaGTGCGCGAGTCACATTCCT +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSGSQGR*CASHIP
Trigger: AGGAATGTGACTCGCGCAGCAACGCCCCTGCGACCC...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGGGGTCGCAGGGGCGTTaGTGCGCGAGTCACATTCCT +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARGSQGR*CASHIP
Trigger: AGGAATGTGACTCGCGCAGCAACGCCCCTGCGACCC...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGGCGGCAAAGGCCAGCTaGATCTGCTTCCGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARAAKAS*ICFRRA
Trigger: TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGC...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp AGGTGGCCTGTGCCCGCCAGTGCTGGCAGCGGCCAGGTCCCCAGGGGACCTGTGCCTGTACAGGCCCACTaGCCACCCTGTCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RWPVPASAGSGQVPRGPVPVQAH*PPCPRW
Trigger: CCACCTGGGACAGGGTGGGCAGTGGGCCTGTACAGG...CACAGGTCCCCTGGGGACCTGGCCGCTGCCAGCACTGGCGGGCACAGGCCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGAGACCCCAGGGCCCTaGCTCTGCCGGAGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPETPGP*LCRSAL
Trigger: CAGGGCGCTCCGGCAGAGGCAGGGCCCTGGGGTCTC...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCTGGGGCTGCCGTCTCTaGTCCAAGCCCCTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRWGCRL*SKPLRL
Trigger: CAGGCGGAGGGGCTTGGAGCAGAGACGGCAGCCCCA...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGTGGGGCTGCCGTCTCTaGTCCAAGCCCCTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGWGCRL*SKPLRL
Trigger: CAGGCGGAGGGGCTTGGAGCAGAGACGGCAGCCCCA...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCGGGAAGGATGGGGCTaGCGTCTCTGCTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRREGWG*RLCSKP
Trigger: GGGCTTGGAGCAGAGACGGCAGCCCCATCCTTCCCG...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGGGAAGGATGGGGCTaGCGTCTCTGCTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAREGWG*RLCSKP
Trigger: GGGCTTGGAGCAGAGACGGCAGCCCCATCCTTCCCG...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGTGTGGCTCAGGCTGGTaGTGCGGGAAGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWCGSGW*CGKDGA
Trigger: AGCCCCATCCTTCCCGCAGCACCAGCCTGAGCCACA...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAGGCGGCGGGAGGCGCTaGCAGCTGGGAAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGGGGRR*QLGSQG
Trigger: TCCCTGACTTCCCAGCTGGCAGCGCCTCCCGCCGCC...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTGGTGGCGCTCTCCCGTaGCCAAGGTGCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSGGALP*PRCRAG
Trigger: CCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACC...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGAGCCGTGCCGCTTGTTaGCCTGGTTCACGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQSRAAC*PGSRPR
Trigger: GCGAGGCCGTGAACCAGGCCAACAAGCGGCACGGCT...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGGGGGTGGGAGTGAAGTaGTCGTTGGGGGTAGGTGGA +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREAGVGVK*SLGVGG
Trigger: TCCACCTACCCCCAACGACCACTTCACTCCCACCCC...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGAGATGGACATGCGGGTaGTCAGCCCCAGCACGGGTA +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREARWTCG*SAPARV
Trigger: TACCCGTGCTGGGGCTGACCACCCGCATGTCCATCT...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCCCGGCGACGTGTCGTTaGGCCCGGTGCAGATCACCT +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPPATCR*ARCRSP
Trigger: AGGTGATCTGCACCGGGCCCAACGACACGTCGCCGG...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCCCGGCGACGTGTCGTTaGGCCCGGTGCAGATCACCT +
Preference number: 4 (lower is better)
Translates to: LGRWAPPGASHHGADRGIPATCR*ARCRSP
Trigger: AGGTGATCTGCACCGGGCCCAACGACACGTCGCCGG...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGCCCAGGAGAACCACATaGCCGAGGACAGGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREAPRRTT*PRTGSV
Trigger: CACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGG...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGGCGCTGAGAAGCTTCTaGGGGCGCCTTCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPALRSF*GRLPRC
Trigger: GCATCGGGGAAGGCGCCCCCAGAAGCTTCTCAGCGC...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCGGAAGGCCGCCAGGTTaGCGGTGTAGGAGGCCACGA +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAGRPPG*RCRRPR
Trigger: TCGTGGCCTCCTACACCGCCAACCTGGCGGCCTTCC...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGGAAGGCCGCCAGGTTaGCGGTGTAGGAGGCCACGA +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRGRPPG*RCRRPR
Trigger: TCGTGGCCTCCTACACCGCCAACCTGGCGGCCTTCC...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCCTCTCACGGCCTGGATaGCCTCCGCCGCACTCTCGT +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPLSRPG*PPPHSR
Trigger: ACGAGAGTGCGGCGGAGGCCATCCAGGCCGTGAGAG...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGCTCTCACGGCCTGGATaGCCTCCGCCGCACTCTCGT +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPLSRPG*PPPHSR
Trigger: ACGAGAGTGCGGCGGAGGCCATCCAGGCCGTGAGAG...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCTCTCACGGCCTGGATaGCCTCCGCCGCACTCTCGT +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAALSRPG*PPPHSR
Trigger: ACGAGAGTGCGGCGGAGGCCATCCAGGCCGTGAGAG...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGTTGTCTCTCACGGCCTaGATGGCCTCCGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWLSLTA*MASAAL
Trigger: GAGTGCGGCGGAGGCCATCCAGGCCGTGAGAGACAA...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp AGGTGGCCTGTGCCCGCCAGTGCTGGCAGCGGCCAGGTCCCCAGGGGACCTGTGGGTCTGATGGCCAGGTaGCCTGTGCCCGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RWPVPASAGSGQVPRGPVGLMAR*PVPASA
Trigger: AGCACTGGCGGGCACAGGCCACCTGGCCATCAGACC...CACAGGTCCCCTGGGGACCTGGCCGCTGCCAGCACTGGCGGGCACAGGCCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCTCCGGTCCGCACCTTaGTCCAGCAGGGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLLRSAP*SSRGCP
Trigger: CGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCAAGCCCCTCCGCCTaGGGCCAGTTAGCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSPSPSA*GQLAPA
Trigger: AGCGGGGGCTAACTGGCCCCAGGCGGAGGGGCTTGG...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCCAAGCCCCTCCGCCTaGGGCCAGTTAGCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPPSPSA*GQLAPA
Trigger: AGCGGGGGCTAACTGGCCCCAGGCGGAGGGGCTTGG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGTGCTGCGGGAAGGATaGGGCTGCCGTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRVLREG*GCRLCS
Trigger: GGAGCAGAGACGGCAGCCCCATCCTTCCCGCAGCAC...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGGTGCTGCGGGAAGGATaGGGCTGCCGTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPVLREG*GCRLCS
Trigger: GGAGCAGAGACGGCAGCCCCATCCTTCCCGCAGCAC...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGTGCTGCGGGAAGGATaGGGCTGCCGTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQVLREG*GCRLCS
Trigger: GGAGCAGAGACGGCAGCCCCATCCTTCCCGCAGCAC...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCCCATGGGCCCCACTGTaGCTCAGGCTGGTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRPWAPL*LRLVLR
Trigger: CCGCAGCACCAGCCTGAGCCACAGTGGGGCCCATGG...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGCCATGGGCCCCACTGTaGCTCAGGCTGGTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGPWAPL*LRLVLR
Trigger: CCGCAGCACCAGCCTGAGCCACAGTGGGGCCCATGG...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACAGTCAGGGACGGCCGTaGGGGAGGGCAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDSQGRP*GRAGPA
Trigger: GGCTGGCCCTGCCCTCCCCCACGGCCGTCCCTGACT...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCTGGTTCTGTACAAGGTaGCGGGCCGGTCACGCACCC +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGWFCTR*RAGHAP
Trigger: GGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCA...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCCACGCGCTCGGGCCCTaGGAGTGCTGGTTCTGTACA +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSHALGP*ECWFCT
Trigger: TGTACAGAACCAGCACTCCCAGGGCCCGAGCGCGTG...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGCATACACCGGGAGGTaGGGGTTGGGCGGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPAYTGR*GLGGAR
Trigger: GCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR CAA 72 bp GGCACCGTGTGGCGGGGGCTGCCCGGCGACGTGTCGTaGGGCCCGGTGCAGATCACCTTCTTGACTGGGTCG +
Preference number: 4 (lower is better)
Translates to: GTVWRGLPGDVS*GPVQITFLTGS
Trigger: CGACCCAGTCAAGAAGGTGATCTGCACCGGGCCCAACGACACGTCGCCGGGCAGCCCCCGCCACACGGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTACGAGGGAAGGGGCGCTaGAGCGTGCGCGGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLRGKGR*SVRGGS
Trigger: CGAGCCCCCGCGCACGCTTCAGCGCCCCTTCCCTCG...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371561.8
CDS-3UTR TCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACGTCTCCAGGCGTTTCTaGGCCGCCCGGCCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDVSRRF*AARPSW
Trigger: CCACGAGGGCCGGGCGGCTCAGAAACGCCTGGAGAC...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACGCCCACGGCGTCGCTaGTGTGGGCCGACTCGTTCT +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGRPRRR*CGPTRS
Trigger: AGAACGAGTCGGCCCACATCAGCGACGCCGTGGGCG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCGCCCACGGCGTCGCTaGTGTGGGCCGACTCGTTCT +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPRPRRR*CGPTRS
Trigger: AGAACGAGTCGGCCCACATCAGCGACGCCGTGGGCG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCACTCAGCGTGGGCTTaGCGTACACGAAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGHSAWA*RTRRAP
Trigger: AGGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTG...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGGGTGCACCTCGTAGGTaGAGTTCATGGTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREAGAPRR*SSWSVP
Trigger: TGGCACGGACCATGAACTTCACCTACGAGGTGCACC...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGTGTCTGCCTGCCCGCTaGGCAGCTCGCCCATCATCC +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGCLPAR*AARPSS
Trigger: GGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACA...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCTGTCTGCCTGCCCGCTaGGCAGCTCGCCCATCATCC +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRCLPAR*AARPSS
Trigger: GGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACA...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCTCTGGAACGGCTGCATaGACGAGTCCAGCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSSGTAA*TSPACS
Trigger: GGAGCACGCTGGACTCGTTCATGCAGCCGTTCCAGA...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCCCCGATGCCGGAGTTaGGCAGGACGCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPPRCRS*AGRPRR
Trigger: TCTCCTGGGGCGTCCTGCTCAACTCCGGCATCGGGG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
70% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCCCCCGATGCCGGAGTTaGGCAGGACGCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPPRCRS*AGRPRR
Trigger: TCTCCTGGGGCGTCCTGCTCAACTCCGGCATCGGGG...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
70% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACGCCCAGGATGCGCGCTaGGAAGCTTCTGGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDAQDAR*EASGGA
Trigger: GGCGCCCCCAGAAGCTTCTCAGCGCGCATCCTGGGC...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCCCAGGATGCGCGCTaGGAAGCTTCTGGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPAQDAR*EASGGA
Trigger: GGCGCCCCCAGAAGCTTCTCAGCGCGCATCCTGGGC...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGTGTAGGAGGCCACGATaGTCATGGCAAAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARCRRPR*SWQSRP
Trigger: GGGCCGGCTTTGCCATGATCATCGTGGCCTCCTACA...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGCATTCTCGTGGGACTTaGGGATGGACAGGGAGACGT +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSHSRGT*GWTGRR
Trigger: ACGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATG...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCAGGACCTACGCCTCTTaGAGCTGGAAGCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGRTYAS*SWKPGW
Trigger: CCACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCT...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371561.8
CDS-3UTR TCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCGCTGACCGAGGGATCTaGGAGGTTGAGCGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRADRGI*EVERAR
Trigger: ACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGC...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTCACACCACGGTGCTaGCCGAGGGATCTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGLTPRC*PRDLRG
Trigger: ACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAG...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGCTCGTGCTTCCGCGTaGTCAGCACCGCGCCAATGT +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRARASA*SAPRQC
Trigger: ACATTGGCGCGGTGCTGAGCACGCGGAAGCACGAGC...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCCGGAACATCTGCTCGTaGTTCCGCGTGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSRNICS*FRVLST
Trigger: GGTGCTGAGCACGCGGAAGCACGAGCAGATGTTCCG...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCGGAACATCTGCTCGTaGTTCCGCGTGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARRNICS*FRVLST
Trigger: GGTGCTGAGCACGCGGAAGCACGAGCAGATGTTCCG...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCGCCTCGCGGAACATCTaGTCGTGCTTCCGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAASRNI*SCFRVL
Trigger: GAGCACGCGGAAGCACGAGCAGATGTTCCGCGAGGC...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCCCAGCACGGGTATaGGGTAGAAGCCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQAPARV*GRSRLC
Trigger: ACACAGCCGGCTTCTACCGCATACCCGTGCTGGGGC...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCCGAGTAGATGGACATaGGGGTGGTCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARPSRWT*GWSAPA
Trigger: TGCTGGGGCTGACCACCCGCATGTCCATCTACTCGG...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGCCGAGTAGATGGACATaGGGGTGGTCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWPSRWT*GWSAPA
Trigger: TGCTGGGGCTGACCACCCGCATGTCCATCTACTCGG...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCAGTAGGGCGGCACGGTaGGCAGGAAGCTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAASRAAR*AGSSGG
Trigger: TCCACCTGAGCTTCCTGCGCACCGTGCCGCCCTACT...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCGTTCAGCATCGCGGCTaGGCGGTATACAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGVQHRG*AVYSGS
Trigger: GCTGCCACTGTATACCGCGCAGCCGCGATGCTGAAC...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGGTTCAGCATCGCGGCTaGGCGGTATACAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWVQHRG*AVYSGS
Trigger: GCTGCCACTGTATACCGCGCAGCCGCGATGCTGAAC...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCGTTCAGCATCGCGGCTaGGCGGTATACAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSVQHRG*AVYSGS
Trigger: GCTGCCACTGTATACCGCGCAGCCGCGATGCTGAAC...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGTTCTCGAGGAGCTCGTaGACGGCCTGGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGFSRSS*TAWATT
Trigger: CGTGGTGGCCCAGGCCGTGCACGAGCTCCTCGAGAA...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTCGCCACGATCATGTCTaGCTGCCCGCTGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSRHDHV*LPAEQL
Trigger: GAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCG...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGAGGACAGGGTCAGTaGGTCCTCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAARGQGQ*VLLLLL
Trigger: GAGGAGGAGGAGGAGGACGCACTGACCCTGTCCTCG...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGTATGCCGGTACATGGTaGTCAGCTCCACCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWYAGTW*SAPPGA
Trigger: GGCGCCAGGTGGAGCTGAGCACCATGTACCGGCATA...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGACCAGGTCGCACTTCTaGGAGGCCTCGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWTRSHF*EASNSS
Trigger: GCTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGT...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCGGCTGTCTTTGCGCATaGCTATGCCGAAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSGCLCA*LCRSPS
Trigger: GCTCGGGCTTCGGCATAGGCATGCGCAAAGACAGCC...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGGGGTCGCAGGGGCGTTaGTGCGCGAGTCACATTCCT +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPGSQGR*CASHIP
Trigger: AGGAATGTGACTCGCGCAGCAACGCCCCTGCGACCC...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTGGGTCGCAGGGGCGTTaGTGCGCGAGTCACATTCCT +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSGSQGR*CASHIP
Trigger: AGGAATGTGACTCGCGCAGCAACGCCCCTGCGACCC...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGGGTCGCAGGGGCGTTaGTGCGCGAGTCACATTCCT +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPGSQGR*CASHIP
Trigger: AGGAATGTGACTCGCGCAGCAACGCCCCTGCGACCC...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCGGCAAAGGCCAGCTaGATCTGCTTCCGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQAAKAS*ICFRRA
Trigger: TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGC...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCGCGGCAAAGGCCAGCTaGATCTGCTTCCGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: LGRWAPPGASHHGADRGIAAKAS*ICFRRA
Trigger: TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGC...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGTGGGGCTGCCGTCTCTaGTCCAAGCCCCTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLWGCRL*SKPLRL
Trigger: CAGGCGGAGGGGCTTGGAGCAGAGACGGCAGCCCCA...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGCGGGAAGGATGGGGCTaGCGTCTCTGCTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGREGWG*RLCSKP
Trigger: GGGCTTGGAGCAGAGACGGCAGCCCCATCCTTCCCG...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTTGTGGCTCAGGCTGGTaGTGCGGGAAGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSCGSGW*CGKDGA
Trigger: AGCCCCATCCTTCCCGCAGCACCAGCCTGAGCCACA...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCTCGGGCCCTGGGAGTaGTGGTTCTGTACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARLGPWE*WFCTRW
Trigger: CCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAG...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGTTTAGGCATCACCACTaGATACACCGGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSFRHHH*IHREVG
Trigger: CCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp AGGTGGCCTGTGCCCGCCAGTGCTGGCAGCGGCCAGGTCCCCAGGGGACCTGTGTGCCGCTTGTTGGCCTaGTTCACGGCCTCGCGGAAC +
Preference number: 4 (lower is better)
Translates to: RWPVPASAGSGQVPRGPVCRLLA*FTASRN
Trigger: GTTCCGCGAGGCCGTGAACCAGGCCAACAAGCGGCA...CACAGGTCCCCTGGGGACCTGGCCGCTGCCAGCACTGGCGGGCACAGGCCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGAGCCGTGCCGCTTGTTaGCCTGGTTCACGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGSRAAC*PGSRPR
Trigger: GCGAGGCCGTGAACCAGGCCAACAAGCGGCACGGCT...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGGGGGTGGGAGTGAAGTaGTCGTTGGGGGTAGGTGGA +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWGVGVK*SLGVGG
Trigger: TCCACCTACCCCCAACGACCACTTCACTCCCACCCC...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
70% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCGGGGTGGGAGTGAAGTaGTCGTTGGGGGTAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSGVGVK*SLGVGG
Trigger: TCCACCTACCCCCAACGACCACTTCACTCCCACCCC...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGTCTCAAACCACACGCTaGACTGGTGGGAGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREASQTTR*TGGSRA
Trigger: CGCCCTACTCCCACCAGTCCAGCGTGTGGTTTGAGA...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCCTATGGAATGGGTACCGGCGGGCGACTCTGGAGACAGAGGGGCCAGGCGGAGGCCGCCCGGCCCTCGTaGTCGTCGCTGACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SYGMGTGGRLWRQRGQAEAARPS*SSLTSR
Trigger: CCTGCTGGTCAGCGACGACCACGAGGGCCGGGCGGC...CTCCGCCTGGCCCCTCTGTCTCCAGAGTCGCCCGCCGGTACCCATTCCATAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGACGGCGTCGCTGATGTaGGCCGACTCGTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQTASLM*ADSFLP
Trigger: CGGCAAGAACGAGTCGGCCCACATCAGCGACGCCGT...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCCGGTCTTCCAGATGTTaGTGTTGCCCACGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSRSSRC*CCPRSP
Trigger: GGGGCTGCGTGGGCAACACCAACATCTGGAAGACCG...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCCCGGCGACGTGTCGTTaGGCCCGGTGCAGATCACCT +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRPATCR*ARCRSP
Trigger: AGGTGATCTGCACCGGGCCCAACGACACGTCGCCGG...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCCCCAGGAGAACCACATaGCCGAGGACAGGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSPRRTT*PRTGSV
Trigger: CACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGG...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGCCATATGCCGGTACATaGTGCTCAGCTCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREAPYAGT*CSAPPG
Trigger: GCCAGGTGGAGCTGAGCACCATGTACCGGCATATGG...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTTGTCTCTCACGGCCTaGATGGCCTCCGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: LGRWAPPGASHHGADRGILSLTA*MASAAL
Trigger: GAGTGCGGCGGAGGCCATCCAGGCCGTGAGAGACAA...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGTTGTCTCTCACGGCCTaGATGGCCTCCGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQLSLTA*MASAAL
Trigger: GAGTGCGGCGGAGGCCATCCAGGCCGTGAGAGACAA...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACTCTGGCCTCAGGTCTGATGGCCAGGTGGCCTGTGCCCGCCAGTGCTGGCAGCTTGGAGCAGGGTGCGTaGCCTCCCTCGGCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: TLASGLMARWPVPASAGSLEQGA*PPSAPA
Trigger: AGCCGGGGCCGAGGGAGGCCACGCACCCTGCTCCAA...GCTGCCAGCACTGGCGGGCACAGGCCACCTGGCCATCAGACCTGAGGCCAGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCCCGAGGATGCCGTCTaGGGCGTAGCGCAGGGCGTT +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPPEDAV*GVAQGV
Trigger: AACGCCCTGCGCTACGCCCCAGACGGCATCCTCGGG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCCCGAGGATGCCGTCTaGGGCGTAGCGCAGGGCGTT +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLPEDAV*GVAQGV
Trigger: AACGCCCTGCGCTACGCCCCAGACGGCATCCTCGGG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAAGGGTGGGCAGTCTCTaGGGCGGGTGGGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGRVGSL*GGWASL
Trigger: GAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCT...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCAGGGTGGGCAGTCTCTaGGGCGGGTGGGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPRVGSL*GGWASL
Trigger: GAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCT...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTCTCCGGTCCGCACCTTaGTCCAGCAGGGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPLRSAP*SSRGCP
Trigger: CGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAG...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTCCAAGCCCCTCCGCCTaGGGCCAGTTAGCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPPSPSA*GQLAPA
Trigger: AGCGGGGGCTAACTGGCCCCAGGCGGAGGGGCTTGG...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCGTGCTGCGGGAAGGATaGGGCTGCCGTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRVLREG*GCRLCS
Trigger: GGAGCAGAGACGGCAGCCCCATCCTTCCCGCAGCAC...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCCACTGTGGCTCAGGCTaGTGCTGCGGGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: LGRWAPPGASHHGADRGIHCGSG*CCGKDG
Trigger: CCCATCCTTCCCGCAGCACCAGCCTGAGCCACAGTG...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCCAGACGGGGTGTGGGTaGGCGGTGCCGCAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRQTGCG*AVPQEE
Trigger: CTCTTCTTGCGGCACCGCCCACCCACACCCCGTCTG...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGGCAGACGGGGTGTaGGTGGGCGGTGCCGCAAGA +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPGADGV*VGGAAR
Trigger: TCTTGCGGCACCGCCCACCCACACCCCGTCTGCCCC...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCTGGTTCTGTACAAGGTaGCGGGCCGGTCACGCACCC +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPWFCTR*RAGHAP
Trigger: GGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCA...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGTGGTTCTGTACAAGGTaGCGGGCCGGTCACGCACCC +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPWFCTR*RAGHAP
Trigger: GGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCA...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCGAGGTGGCATTGAGCTaGATCTTCCAGGAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGEVALS*IFQEPC
Trigger: GCACGGCTCCTGGAAGATTCAGCTCAATGCCACCTC...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGGAGGTGGCATTGAGCTaGATCTTCCAGGAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWEVALS*IFQEPC
Trigger: GCACGGCTCCTGGAAGATTCAGCTCAATGCCACCTC...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCAGACCTGGCTGGAGATaGGGTCCTCGCACACCGACA +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAARPGWR*GPRTPT
Trigger: TGTCGGTGTGCGAGGACCTCATCTCCAGCCAGGTCT...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCAGACCTGGCTGGAGATaGGGTCCTCGCACACCGACA +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPRPGWR*GPRTPT
Trigger: TGTCGGTGTGCGAGGACCTCATCTCCAGCCAGGTCT...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACCGCCCACGGCGTCGCTaGTGTGGGCCGACTCGTTCT +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDRPRRR*CGPTRS
Trigger: AGAACGAGTCGGCCCACATCAGCGACGCCGTGGGCG...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACCCGCGGCGGGTCGGTaGTGTTCTCCTTCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGPAAGR*CSPSRG
Trigger: TCCTCGAGAAGGAGAACATCACCGACCCGCCGCGGG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGCGGCGGGTCGGTaGTGTTCTCCTTCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSPAAGR*CSPSRG
Trigger: TCCTCGAGAAGGAGAACATCACCGACCCGCCGCGGG...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCCCGCGGCGGGTCGGTaGTGTTCTCCTTCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPPAAGR*CSPSRG
Trigger: TCCTCGAGAAGGAGAACATCACCGACCCGCCGCGGG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCACATCAGCACTCTCTTaGAGAGCGGCCCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGTSALS*RAARSS
Trigger: GGAAGACCGGGCCGCTCTTCAAGAGAGTGCTGATGT...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGCACTCAGCGTGGGCTTaGCGTACACGAAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQHSAWA*RTRRAP
Trigger: AGGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTG...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCACTCAGCGTGGGCTTaGCGTACACGAAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAHSAWA*RTRRAP
Trigger: AGGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTG...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCGGTGCACCTCGTAGGTaGAGTTCATGGTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGGAPRR*SSWSVP
Trigger: TGGCACGGACCATGAACTTCACCTACGAGGTGCACC...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTTGTCTGCCTGCCCGCTaGGCAGCTCGCCCATCATCC +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSCLPAR*AARPSS
Trigger: GGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACA...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGTGTCTGCCTGCCCGCTaGGCAGCTCGCCCATCATCC +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLCLPAR*AARPSS
Trigger: GGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACA...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCTCTGGAACGGCTGCATaGACGAGTCCAGCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPSGTAA*TSPACS
Trigger: GGAGCACGCTGGACTCGTTCATGCAGCCGTTCCAGA...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGTGTAGGAGGCCACGATaGTCATGGCAAAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRCRRPR*SWQSRP
Trigger: GGGCCGGCTTTGCCATGATCATCGTGGCCTCCTACA...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGTGTCCAGGTCTTCCATaGAGCCATTCTCGTGGGACT +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSCPGLP*SHSRGT
Trigger: AGTCCCACGAGAATGGCTTCATGGAAGACCTGGACA...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGCGCGAGTCACATTCCTaGTACCGAACCCACGTCTTG +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREARESHS*YRTHVL
Trigger: CAAGACGTGGGTTCGGTATCAGGAATGTGACTCGCG...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGCCCCAGCTACCAGCATaGAGACCCCGGCCATGTTCT +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQPQLPA*RPRPCS
Trigger: AGAACATGGCCGGGGTCTTCATGCTGGTAGCTGGGG...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGCTGACCGAGGGATCTaGGAGGTTGAGCGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPADRGI*EVERAR
Trigger: ACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTCGGAACATCTGCTCGTaGTTCCGCGTGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSRNICS*FRVLST
Trigger: GGTGCTGAGCACGCGGAAGCACGAGCAGATGTTCCG...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCATGGCGTTGGGCTTGTaGGTGACGGAGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGMALGL*VTEVAL
Trigger: CAATGCCACCTCCGTCACGCACAAGCCCAACGCCAT...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCCGAGTAGATGGACATaGGGGTGGTCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAPSRWT*GWSAPA
Trigger: TGCTGGGGCTGACCACCCGCATGTCCATCTACTCGG...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCGAGTAGATGGACATaGGGGTGGTCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRPSRWT*GWSAPA
Trigger: TGCTGGGGCTGACCACCCGCATGTCCATCTACTCGG...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTGTTCAGCATCGCGGCTaGGCGGTATACAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSVQHRG*AVYSGS
Trigger: GCTGCCACTGTATACCGCGCAGCCGCGATGCTGAAC...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCTCCAGATGTTGGTGTTaGCCACGCAGCCCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPSRCWC*PRSPAA
Trigger: CGCCGCGGGGCTGCGTGGGCAACACCAACATCTGGA...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCCGTGTGGCGGGGGCTaGCCGGCGACGTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGPCGGG*PATCRW
Trigger: CCAACGACACGTCGCCGGGCAGCCCCCGCCACACGG...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGGAAGTTCATGGTCCGTaGCAGCTTGATGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSEVHGP*QLDEQV
Trigger: GACCTGCTCATCAAGCTGGCACGGACCATGAACTTC...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCCCTGTGTGCCGAACTTaGCATCTGCCACCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSPVCRT*HLPPGA
Trigger: TGCACCTGGTGGCAGATGGCAAGTTCGGCACACAGG...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGGTGCTCTGGAACGGCTaGATGAACGAGTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWVLWNG*MNESSV
Trigger: CACGCTGGACTCGTTCATGCAGCCGTTCCAGAGCAC...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCATCACGGCCACCACGTaGACCGACAGCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPITATT*TDSPTS
Trigger: GCTGGTGGGGCTGTCGGTGCACGTGGTGGCCGTGAT...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCAGCCGGCCCACACCATaGCCAGGATGCGCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPSRPTP*PGCALR
Trigger: TCTCAGCGCGCATCCTGGGCATGGTGTGGGCCGGCT...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGAGCCGGCCCACACCATaGCCAGGATGCGCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLSRPTP*PGCALR
Trigger: TCTCAGCGCGCATCCTGGGCATGGTGTGGGCCGGCT...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTAGCCGGCCCACACCATaGCCAGGATGCGCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSSRPTP*PGCALR
Trigger: TCTCAGCGCGCATCCTGGGCATGGTGTGGGCCGGCT...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCTATGCCGGTACATGGTaGTCAGCTCCACCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPYAGTW*SAPPGA
Trigger: GGCGCCAGGTGGAGCTGAGCACCATGTACCGGCATA...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGACCAGGTCGCACTTCTaGGAGGCCTCGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPTRSHF*EASNSS
Trigger: GCTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGT...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGACCAGGTCGCACTTCTaGGAGGCCTCGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQTRSHF*EASNSS
Trigger: GCTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGT...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCACCAGGTCGCACTTCTaGGAGGCCTCGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPTRSHF*EASNSS
Trigger: GCTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGT...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp AGGTGGCCTGTGCCCGCCAGTGCTGGCAGCGGCCAGGTCCCCAGGGGACCTGTGGGCTGTCTTTGCGCATaGCTATGCCGAAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: RWPVPASAGSGQVPRGPVGCLCA*LCRSPS
Trigger: GCTCGGGCTTCGGCATAGGCATGCGCAAAGACAGCC...CACAGGTCCCCTGGGGACCTGGCCGCTGCCAGCACTGGCGGGCACAGGCCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGGGCTGTCTTTGCGCATaGCTATGCCGAAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPGCLCA*LCRSPS
Trigger: GCTCGGGCTTCGGCATAGGCATGCGCAAAGACAGCC...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCAAGGCCAGCTGCATCTaGTTCCGGCGAGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSKASCI*FRRASL
Trigger: CAAGGATGCTCGCCGGAAGCAGATGCAGCTGGCCTT...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGGCGGCAAAGGCCAGCTaGATCTGCTTCCGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGAAKAS*ICFRRA
Trigger: TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGC...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCGCGGCAAAGGCCAGCTaGATCTGCTTCCGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRAAKAS*ICFRRA
Trigger: TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGC...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CAAGAGCGGGCGGATGAGAGGTGTGGAGCCTCCAGCAACCCCCATCCCCCAGCACCGGTGCTGCCCCCGTaGCCTGGGAGCACTCACCAC +
Preference number: 4 (lower is better)
Translates to: QERADERCGASSNPHPPAPVLPP*PGSTHH
Trigger: GTGGTGAGTGCTCCCAGGGCACGGGGGCAGCACCGG...TGCTGGGGGATGGGGGTTGCTGGAGGCTCCACACCTCTCATCCGCCCGCTCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp ACTCTGGCCTCAGGTCTGATGGCCAGGTGGCCTGTGCCCGCCAGTGCTGGCAGCACACCTGCCCTCGCCTaGTCCTGCATGGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: TLASGLMARWPVPASAGSTPALA*SCMGRC
Trigger: GCAGCGGCCCATGCAGGAGCAGGCGAGGGCAGGTGT...GCTGCCAGCACTGGCGGGCACAGGCCACCTGGCCATCAGACCTGAGGCCAGAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGTTGCCGTTGATGAGCTaGAGCCCGAGGATGCCGTCT +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWLPLMS*SPRMPS
Trigger: AGACGGCATCCTCGGGCTGCAGCTCATCAACGGCAA...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACTGGGGCTGCCGTCTCTaGTCCAAGCCCCTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDWGCRL*SKPLRL
Trigger: CAGGCGGAGGGGCTTGGAGCAGAGACGGCAGCCCCA...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTCTCCCGTGCCCAAGGTaGAGGGCAGGGTTGAAGACA +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSLPCPR*RAGLKT
Trigger: TGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAG...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCCTCGGGCCCTGGGAGTaGTGGTTCTGTACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LGRWAPPGASHHGADRGILGPWE*WFCTRW
Trigger: CCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAG...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGTGGGGGTTGGGCGGTaGGCGCCTGCACCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPVGVGR*APAPWG
Trigger: TCCCCAGGGTGCAGGCGCGCACCGCCCAACCCCCAC...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAGTGGGGGTTGGGCGGTaGGCGCCTGCACCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLVGVGR*APAPWG
Trigger: TCCCCAGGGTGCAGGCGCGCACCGCCCAACCCCCAC...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGAGCCGTGCCGCTTGTTaGCCTGGTTCACGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLSRAAC*PGSRPR
Trigger: GCGAGGCCGTGAACCAGGCCAACAAGCGGCACGGCT...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAAGCCGTGCCGCTTGTTaGCCTGGTTCACGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGSRAAC*PGSRPR
Trigger: GCGAGGCCGTGAACCAGGCCAACAAGCGGCACGGCT...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCAGATGGACATGCGGGTaGTCAGCCCCAGCACGGGTA +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAARWTCG*SAPARV
Trigger: TACCCGTGCTGGGGCTGACCACCCGCATGTCCATCT...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGAGATGGACATGCGGGTaGTCAGCCCCAGCACGGGTA +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRRWTCG*SAPARV
Trigger: TACCCGTGCTGGGGCTGACCACCCGCATGTCCATCT...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCTCTCAAACCACACGCTaGACTGGTGGGAGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSSQTTR*TGGSRA
Trigger: CGCCCTACTCCCACCAGTCCAGCGTGTGGTTTGAGA...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAGCCGCCCGGCCCTCGTaGTCGTCGCTGACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAAARPS*SSLTSR
Trigger: CCTGCTGGTCAGCGACGACCACGAGGGCCGGGCGGC...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGCACGTTCTTGGTCCCTaGGTCAAACTGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSHVLGP*VKLQHL
Trigger: AAGGTGCTGCAGTTTGACCCAGGGACCAAGAACGTG...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTCTGCGCGGTATACAGTaGCAGCATCGTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSLRGIQ*QHRPRW
Trigger: CCAGCGAGGACGATGCTGCCACTGTATACCGCGCAG...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCCTGCGCGGTATACAGTaGCAGCATCGTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPLRGIQ*QHRPRW
Trigger: CCAGCGAGGACGATGCTGCCACTGTATACCGCGCAG...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCTGCGCGGTATACAGTaGCAGCATCGTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRLRGIQ*QHRPRW
Trigger: CCAGCGAGGACGATGCTGCCACTGTATACCGCGCAG...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACGGCGTCGCTGATGTaGGCCGACTCGTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRTASLM*ADSFLP
Trigger: CGGCAAGAACGAGTCGGCCCACATCAGCGACGCCGT...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTCGGTCTTCCAGATGTTaGTGTTGCCCACGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSRSSRC*CCPRSP
Trigger: GGGGCTGCGTGGGCAACACCAACATCTGGAAGACCG...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGGTCTTCCAGATGTTaGTGTTGCCCACGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAARSSRC*CCPRSP
Trigger: GGGGCTGCGTGGGCAACACCAACATCTGGAAGACCG...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCCGGTCTTCCAGATGTTaGTGTTGCCCACGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LGRWAPPGASHHGADRGIRSSRC*CCPRSP
Trigger: GGGGCTGCGTGGGCAACACCAACATCTGGAAGACCG...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCCGGCGACGTGTCGTTaGGCCCGGTGCAGATCACCT +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPPATCR*ARCRSP
Trigger: AGGTGATCTGCACCGGGCCCAACGACACGTCGCCGG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCCGGCGACGTGTCGTTaGGCCCGGTGCAGATCACCT +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLPATCR*ARCRSP
Trigger: AGGTGATCTGCACCGGGCCCAACGACACGTCGCCGG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGAGCCACAGTGTGCTCTaGAACGGCTGCATGAACGAG +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREASHSVL*NGCMNE
Trigger: CTCGTTCATGCAGCCGTTCCAGAGCACACTGTGGCT...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCCAGGAGAACCACATaGCCGAGGACAGGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRPRRTT*PRTGSV
Trigger: CACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGG...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCGCGCTGAGAAGCTTCTaGGGGCGCCTTCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPALRSF*GRLPRC
Trigger: GCATCGGGGAAGGCGCCCCCAGAAGCTTCTCAGCGC...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTGCGCTGAGAAGCTTCTaGGGGCGCCTTCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSALRSF*GRLPRC
Trigger: GCATCGGGGAAGGCGCCCCCAGAAGCTTCTCAGCGC...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCGGAAGGCCGCCAGGTTaGCGGTGTAGGAGGCCACGA +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPGRPPG*RCRRPR
Trigger: TCGTGGCCTCCTACACCGCCAACCTGGCGGCCTTCC...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTGGAAGGCCGCCAGGTTaGCGGTGTAGGAGGCCACGA +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSGRPPG*RCRRPR
Trigger: TCGTGGCCTCCTACACCGCCAACCTGGCGGCCTTCC...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCCCATATGCCGGTACATaGTGCTCAGCTCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSPYAGT*CSAPPG
Trigger: GCCAGGTGGAGCTGAGCACCATGTACCGGCATATGG...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGCCATATGCCGGTACATaGTGCTCAGCTCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWPYAGT*CSAPPG
Trigger: GCCAGGTGGAGCTGAGCACCATGTACCGGCATATGG...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACTCTCACGGCCTGGATaGCCTCCGCCGCACTCTCGT +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGLSRPG*PPPHSR
Trigger: ACGAGAGTGCGGCGGAGGCCATCCAGGCCGTGAGAG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CAAGAGCGGGCGGATGAGAGGTGTGGAGCCTCCAGCAACCCCCATCCCCCAGCAGCTGCCCCCGTGCCCTaGGAGCACTCACCACTGCCC +
Preference number: 4 (lower is better)
Translates to: QERADERCGASSNPHPPAAAPVP*EHSPLP
Trigger: GGGCAGTGGTGAGTGCTCCCAGGGCACGGGGGCAGC...TGCTGGGGGATGGGGGTTGCTGGAGGCTCCACACCTCTCATCCGCCCGCTCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp CAAGAGCGGGCGGATGAGAGGTGTGGAGCCTCCAGCAACCCCCATCCCCCAGCACCTGGGAGGTCCGCCTaGCTCCCTGGCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QERADERCGASSNPHPPAPGRSA*LPGSWV
Trigger: CACCCAGGAGCCAGGGAGCCAGGCGGACCTCCCAGG...TGCTGGGGGATGGGGGTTGCTGGAGGCTCCACACCTCTCATCCGCCCGCTCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACCCCGAGGATGCCGTCTaGGGCGTAGCGCAGGGCGTT +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDPEDAV*GVAQGV
Trigger: AACGCCCTGCGCTACGCCCCAGACGGCATCCTCGGG...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTCCATGGGCCCCACTGTaGCTCAGGCTGGTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPPWAPL*LRLVLR
Trigger: CCGCAGCACCAGCCTGAGCCACAGTGGGGCCCATGG...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACCCATGGGCCCCACTGTaGCTCAGGCTGGTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDPWAPL*LRLVLR
Trigger: CCGCAGCACCAGCCTGAGCCACAGTGGGGCCCATGG...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCCAGACGGGGTGTGGGTaGGCGGTGCCGCAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPQTGCG*AVPQEE
Trigger: CTCTTCTTGCGGCACCGCCCACCCACACCCCGTCTG...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAGCCAGCCCCGGCGTGTaGGGTCAAGGGGCAGACGGG +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAASPGV*GQGADG
Trigger: CCCGTCTGCCCCTTGACCCCACACGCCGGGGCTGGC...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCCAGCCCCGGCGTGTaGGGTCAAGGGGCAGACGGG +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPASPGV*GQGADG
Trigger: CCCGTCTGCCCCTTGACCCCACACGCCGGGGCTGGC...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCGGGGAGGCCCGTTCTaGGCTGCAGGCCGGACGAGG +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGRGGPF*AAGRTR
Trigger: CCTCGTCCGGCCTGCAGCCCAGAACGGGCCTCCCCG...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCGGGCCCTGGGAGTGCTaGTTCTGTACAAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRGPWEC*FCTRWR
Trigger: CCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGCACGCGCTCGGGCCCTaGGAGTGCTGGTTCTGTACA +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGHALGP*ECWFCT
Trigger: TGTACAGAACCAGCACTCCCAGGGCCCGAGCGCGTG...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
3UTR CAA 72 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTaGGCCGGGCTAACTGGGCAGGTGGGCGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVS*AGLTGQVGASG
Trigger: CCCGGAGGCGCCCACCTGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGAGGTGGCATTGAGCTaGATCTTCCAGGAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPEVALS*IFQEPC
Trigger: GCACGGCTCCTGGAAGATTCAGCTCAATGCCACCTC...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGAGACCTGGCTGGAGATaGGGTCCTCGCACACCGACA +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGRPGWR*GPRTPT
Trigger: TGTCGGTGTGCGAGGACCTCATCTCCAGCCAGGTCT...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GTTAGCGGCGCCACGATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCGTCTCCAGGCGTTTCTaGGCCGCCCGGCCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: VSGATIMSACPLSSSPIIVSRRF*AARPSW
Trigger: CCACGAGGGCCGGGCGGCTCAGAAACGCCTGGAGAC...GATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCGCCGCTAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTCCCGCGGCGGGTCGGTaGTGTTCTCCTTCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPPAAGR*CSPSRG
Trigger: TCCTCGAGAAGGAGAACATCACCGACCCGCCGCGGG...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGACATCAGCACTCTCTTaGAGAGCGGCCCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPTSALS*RAARSS
Trigger: GGAAGACCGGGCCGCTCTTCAAGAGAGTGCTGATGT...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCACATCAGCACTCTCTTaGAGAGCGGCCCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LGRWAPPGASHHGADRGITSALS*RAARSS
Trigger: GGAAGACCGGGCCGCTCTTCAAGAGAGTGCTGATGT...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGTCCCCATCCTCATTaGACTCCACGCGACCAGTCA +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQGPHPH*TPRDQS
Trigger: TGACTGGTCGCGTGGAGTTCAATGAGGATGGGGACC...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGGTCCCCATCCTCATTaGACTCCACGCGACCAGTCA +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRGPHPH*TPRDQS
Trigger: TGACTGGTCGCGTGGAGTTCAATGAGGATGGGGACC...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTGGTCCCCATCCTCATTaGACTCCACGCGACCAGTCA +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSGPHPH*TPRDQS
Trigger: TGACTGGTCGCGTGGAGTTCAATGAGGATGGGGACC...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGTGCACCTCGTAGGTaGAGTTCATGGTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQGAPRR*SSWSVP
Trigger: TGGCACGGACCATGAACTTCACCTACGAGGTGCACC...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGCCGCCGAGTCCCAGATaGAGGCATGCAGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQPPSPR*RHAACC
Trigger: ACAACAAGCTGCATGCCTTCATCTGGGACTCGGCGG...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTCCGCCGAGTCCCAGATaGAGGCATGCAGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSPPSPR*RHAACC
Trigger: ACAACAAGCTGCATGCCTTCATCTGGGACTCGGCGG...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCCGCGAGTCACATTCCTaGTACCGAACCCACGTCTTG +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSRESHS*YRTHVL
Trigger: CAAGACGTGGGTTCGGTATCAGGAATGTGACTCGCG...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCGCGAGTCACATTCCTaGTACCGAACCCACGTCTTG +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGRESHS*YRTHVL
Trigger: CAAGACGTGGGTTCGGTATCAGGAATGTGACTCGCG...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCTGACCGAGGGATCTaGGAGGTTGAGCGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPADRGI*EVERAR
Trigger: ACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGC...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGCGGAACATCTGCTCGTaGTTCCGCGTGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGRNICS*FRVLST
Trigger: GGTGCTGAGCACGCGGAAGCACGAGCAGATGTTCCG...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGCCTCGCGGAACATCTaGTCGTGCTTCCGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPASRNI*SCFRVL
Trigger: GAGCACGCGGAAGCACGAGCAGATGTTCCGCGAGGC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGCCTCGCGGAACATCTaGTCGTGCTTCCGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLASRNI*SCFRVL
Trigger: GAGCACGCGGAAGCACGAGCAGATGTTCCGCGAGGC...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCATCTTCCAGGAGCCGTaGCGCTTGTTGGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LGRWAPPGASHHGADRGIIFQEP*RLLAWF
Trigger: GAACCAGGCCAACAAGCGGCACGGCTCCTGGAAGAT...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGATCTTCCAGGAGCCGTaGCGCTTGTTGGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQIFQEP*RLLAWF
Trigger: GAACCAGGCCAACAAGCGGCACGGCTCCTGGAAGAT...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGATGGCGTTGGGCTTGTaGGTGACGGAGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQMALGL*VTEVAL
Trigger: CAATGCCACCTCCGTCACGCACAAGCCCAACGCCAT...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGATGGCGTTGGGCTTGTaGGTGACGGAGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPMALGL*VTEVAL
Trigger: CAATGCCACCTCCGTCACGCACAAGCCCAACGCCAT...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGATGGCGTTGGGCTTGTaGGTGACGGAGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRMALGL*VTEVAL
Trigger: CAATGCCACCTCCGTCACGCACAAGCCCAACGCCAT...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCAGTAGGGCGGCACGGTaGGCAGGAAGCTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPSRAAR*AGSSGG
Trigger: TCCACCTGAGCTTCCTGCGCACCGTGCCGCCCTACT...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTAGTAGGGCGGCACGGTaGGCAGGAAGCTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSSRAAR*AGSSGG
Trigger: TCCACCTGAGCTTCCTGCGCACCGTGCCGCCCTACT...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCGTTCAGCATCGCGGCTaGGCGGTATACAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRVQHRG*AVYSGS
Trigger: GCTGCCACTGTATACCGCGCAGCCGCGATGCTGAAC...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACTTCTCGAGGAGCTCGTaGACGGCCTGGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDFSRSS*TAWATT
Trigger: CGTGGTGGCCCAGGCCGTGCACGAGCTCCTCGAGAA...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTTCCAGATGTTGGTGTTaGCCACGCAGCCCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPSRCWC*PRSPAA
Trigger: CGCCGCGGGGCTGCGTGGGCAACACCAACATCTGGA...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGGCCGAACTTGCCATCTaGCACCAGGTGCACCTCGTA +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPAELAI*HQVHLV
Trigger: TACGAGGTGCACCTGGTGGCAGATGGCAAGTTCGGC...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGCCGAACTTGCCATCTaGCACCAGGTGCACCTCGTA +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPAELAI*HQVHLV
Trigger: TACGAGGTGCACCTGGTGGCAGATGGCAAGTTCGGC...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCGCCGAACTTGCCATCTaGCACCAGGTGCACCTCGTA +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAAELAI*HQVHLV
Trigger: TACGAGGTGCACCTGGTGGCAGATGGCAAGTTCGGC...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCCTGTGTGCCGAACTTaGCATCTGCCACCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAPVCRT*HLPPGA
Trigger: TGCACCTGGTGGCAGATGGCAAGTTCGGCACACAGG...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCTCACCCGCTCCTGTGTaGCGAACTTGCCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAASPAPV*RTCHLP
Trigger: TGGCAGATGGCAAGTTCGGCACACAGGAGCGGGTGA...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGTCACCCGCTCCTGTGTaGCGAACTTGCCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRSPAPV*RTCHLP
Trigger: TGGCAGATGGCAAGTTCGGCACACAGGAGCGGGTGA...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCTCACCCGCTCCTGTGTaGCGAACTTGCCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPSPAPV*RTCHLP
Trigger: TGGCAGATGGCAAGTTCGGCACACAGGAGCGGGTGA...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCACGATCATGTCTGCCTaGCCGCTGAGCAGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPTIMSA*PLSSSP
Trigger: GGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGT...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGACGATCATGTCTGCCTaGCCGCTGAGCAGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLTIMSA*PLSSSP
Trigger: GGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGT...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTGTGCTCTGGAACGGCTaGATGAACGAGTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSVLWNG*MNESSV
Trigger: CACGCTGGACTCGTTCATGCAGCCGTTCCAGAGCAC...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCGAGGACAGGGTCAGTaGGTCCTCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSRGQGQ*VLLLLL
Trigger: GAGGAGGAGGAGGAGGACGCACTGACCCTGTCCTCG...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTAGCCGGCCCACACCATaGCCAGGATGCGCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPSRPTP*PGCALR
Trigger: TCTCAGCGCGCATCCTGGGCATGGTGTGGGCCGGCT...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGTCCCAGATGAAGGCATaGAGCTTGTTGTCTCTCACG +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSSQMKA*SLLSLT
Trigger: CGTGAGAGACAACAAGCTGCATGCCTTCATCTGGGA...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCGACAGGGAGACGTTCTaGTTCCAGGGGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGDRETF*FQGLSL
Trigger: CAAAGACAGCCCCTGGAAGCAGAACGTCTCCCTGTC...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCTCGCAGGGGCGTTGCTaGGCGAGTCACATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAASQGRC*ASHIPD
Trigger: ATCAGGAATGTGACTCGCGCAGCAACGCCCCTGCGA...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGTCGCAGGGGCGTTGCTaGGCGAGTCACATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPSQGRC*ASHIPD
Trigger: ATCAGGAATGTGACTCGCGCAGCAACGCCCCTGCGA...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAGGGTCGCAGGGGCGTTaGTGCGCGAGTCACATTCCT +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGGSQGR*CASHIP
Trigger: AGGAATGTGACTCGCGCAGCAACGCCCCTGCGACCC...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAGCGGCAAAGGCCAGCTaGATCTGCTTCCGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGAAKAS*ICFRRA
Trigger: TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGC...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGTTGCCGTTGATGAGCTaGAGCCCGAGGATGCCGTCT +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRLPLMS*SPRMPS
Trigger: AGACGGCATCCTCGGGCTGCAGCTCATCAACGGCAA...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGATGTGGCTCAGGCTGGTaGTGCGGGAAGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGCGSGW*CGKDGA
Trigger: AGCCCCATCCTTCCCGCAGCACCAGCCTGAGCCACA...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGGTGGCGCTCTCCCGTaGCCAAGGTGCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPGGALP*PRCRAG
Trigger: CCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACC...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGCCACGATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCCCATTCCAGGCGCATGGTGCTCATaGGCTCGGGCCGCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RHDHVCLPAEQLAHHPIPGAWCS*ARAAGL
Trigger: CAGGCCCGCGGCCCGAGCCCATGAGCACCATGCGCC...TGGAATGGGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGGGGGTGGGAGTGAAGTaGTCGTTGGGGGTAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGGVGVK*SLGVGG
Trigger: TCCACCTACCCCCAACGACCACTTCACTCCCACCCC...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCAGATGGACATGCGGGTaGTCAGCCCCAGCACGGGTA +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRRWTCG*SAPARV
Trigger: TACCCGTGCTGGGGCTGACCACCCGCATGTCCATCT...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGTCTTGTCCGAGTAGATaGACATGCGGGTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARSCPSR*TCGWSA
Trigger: GGCTGACCACCCGCATGTCCATCTACTCGGACAAGA...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGGCACCTTCTCTGCCTTaGGTCCGCGCTTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARAPSLP*VRACCH
Trigger: ATGACAACAAGCGCGGACCCAAGGCAGAGAAGGTGC...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371555.8
ENST00000371560.4
CDS-3UTR CCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTGGGCCGTCACGTTCTTaGTCCCTGGGTCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSGPSRS*SLGQTA
Trigger: TGCAGTTTGACCCAGGGACCAAGAACGTGACGGCCC...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGACGGCGTCGCTGATGTaGGCCGACTCGTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLTASLM*ADSFLP
Trigger: CGGCAAGAACGAGTCGGCCCACATCAGCGACGCCGT...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGAGTCTGGTGGACATCTaGTACCCTCGAGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREASLVDI*YPRGFS
Trigger: AGAGAAGCCTCGAGGGTACCAGATGTCCACCAGACT...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGCGCGCTCGTTGTTTATaGTTAGCGGCGCCACGATCA +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWRARCL*LAAPRS
Trigger: TGATCGTGGCGCCGCTAACCATAAACAACGAGCGCG...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCGCGCTCGTTGTTTATaGTTAGCGGCGCCACGATCA +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARRARCL*LAAPRS
Trigger: TGATCGTGGCGCCGCTAACCATAAACAACGAGCGCG...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCGCTGAGAAGCTTCTaGGGGCGCCTTCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPALRSF*GRLPRC
Trigger: GCATCGGGGAAGGCGCCCCCAGAAGCTTCTCAGCGC...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACGGAAGGCCGCCAGGTTaGCGGTGTAGGAGGCCACGA +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDGRPPG*RCRRPR
Trigger: TCGTGGCCTCCTACACCGCCAACCTGGCGGCCTTCC...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTCCATATGCCGGTACATaGTGCTCAGCTCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSPYAGT*CSAPPG
Trigger: GCCAGGTGGAGCTGAGCACCATGTACCGGCATATGG...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGCCATATGCCGGTACATaGTGCTCAGCTCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQPYAGT*CSAPPG
Trigger: GCCAGGTGGAGCTGAGCACCATGTACCGGCATATGG...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTTTGTCTCTCACGGCCTaGATGGCCTCCGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSLSLTA*MASAAL
Trigger: GAGTGCGGCGGAGGCCATCCAGGCCGTGAGAGACAA...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGATGAAGCCATTCTCGTaGGACTTGAGGATGGACAGG +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSMKPFS*DLRMDR
Trigger: CCTGTCCATCCTCAAGTCCCACGAGAATGGCTTCAT...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CAGGACGCCCCAGGAGAACCACATGGCCGAGGACAGGGTCAGTGCGTCCTCCTCCCAGGCCTCGGAGGGTaGCCTGCCCTACCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: QDAPGEPHGRGQGQCVLLPGLGG*PALPAG
Trigger: ACCTGCAGGTAGGGCAGGCCACCCTCCGAGGCCTGG...GAGGAGGACGCACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGGGCGTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp CAAGAGCGGGCGGATGAGAGGTGTGGAGCCTCCAGCAACCCCCATCCCCCAGCAGCCCCGGCTTTGCAGTaGGCAGCCACCTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QERADERCGASSNPHPPAAPALQ*AATCRQ
Trigger: CTGCCTGCAGGTGGCTGCCCACTGCAAAGCCGGGGC...TGCTGGGGGATGGGGGTTGCTGGAGGCTCCACACCTCTCATCCGCCCGCTCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTCTTGGCCGGGCTAACTaGGCAGGTGGGCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPLGRAN*AGGRLR
Trigger: CCGGAGGCGCCCACCTGCCCAGTTAGCCCGGCCAAG...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTCCAAGCCCCTCCGCCTaGGGCCAGTTAGCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPPSPSA*GQLAPA
Trigger: AGCGGGGGCTAACTGGCCCCAGGCGGAGGGGCTTGG...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACGTGCTGCGGGAAGGATaGGGCTGCCGTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDVLREG*GCRLCS
Trigger: GGAGCAGAGACGGCAGCCCCATCCTTCCCGCAGCAC...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCACTGTGGCTCAGGCTaGTGCTGCGGGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLHCGSG*CCGKDG
Trigger: CCCATCCTTCCCGCAGCACCAGCCTGAGCCACAGTG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAGGGGCAGACGGGGTGTaGGTGGGCGGTGCCGCAAGA +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAGADGV*VGGAAR
Trigger: TCTTGCGGCACCGCCCACCCACACCCCGTCTGCCCC...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTACAGCCCTCTCGAGTCTaGAGGAGGCGGCCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLQPSRV*RRRPEA
Trigger: CGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTG...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGTGGTTCTGTACAAGGTaGCGGGCCGGTCACGCACCC +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLWFCTR*RAGHAP
Trigger: GGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCA...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAGGGCCCTGGGAGTGCTaGTTCTGTACAAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGGPWEC*FCTRWR
Trigger: CCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCACGCGCTCGGGCCCTaGGAGTGCTGGTTCTGTACA +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPHALGP*ECWFCT
Trigger: TGTACAGAACCAGCACTCCCAGGGCCCGAGCGCGTG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCACGCGCTCGGGCCCTaGGAGTGCTGGTTCTGTACA +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSHALGP*ECWFCT
Trigger: TGTACAGAACCAGCACTCCCAGGGCCCGAGCGCGTG...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAGCATACACCGGGAGGTaGGGGTTGGGCGGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLAYTGR*GLGGAR
Trigger: GCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGC...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGAGACCTGGCTGGAGATaGGGTCCTCGCACACCGACA +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLRPGWR*GPRTPT
Trigger: TGTCGGTGTGCGAGGACCTCATCTCCAGCCAGGTCT...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCGGTCCCCATCCTCATTaGACTCCACGCGACCAGTCA +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRGPHPH*TPRDQS
Trigger: TGACTGGTCGCGTGGAGTTCAATGAGGATGGGGACC...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGGGTCCCCATCCTCATTaGACTCCACGCGACCAGTCA +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGGPHPH*TPRDQS
Trigger: TGACTGGTCGCGTGGAGTTCAATGAGGATGGGGACC...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACACTCAGCGTGGGCTTaGCGTACACGAAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGHSAWA*RTRRAP
Trigger: AGGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCCACTCAGCGTGGGCTTaGCGTACACGAAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPHSAWA*RTRRAP
Trigger: AGGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTG...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGTCTGGAACGGCTGCATaGACGAGTCCAGCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLSGTAA*TSPACS
Trigger: GGAGCACGCTGGACTCGTTCATGCAGCCGTTCCAGA...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCTCTGGAACGGCTGCATaGACGAGTCCAGCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPSGTAA*TSPACS
Trigger: GGAGCACGCTGGACTCGTTCATGCAGCCGTTCCAGA...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTACCCCGATGCCGGAGTTaGGCAGGACGCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLPRCRS*AGRPRR
Trigger: TCTCCTGGGGCGTCCTGCTCAACTCCGGCATCGGGG...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGCCACGATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCCCATTCCAGCCCAGGATGCGCGCTaGGAAGCTTCTGGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: RHDHVCLPAEQLAHHPIPAQDAR*EASGGA
Trigger: GGCGCCCCCAGAAGCTTCTCAGCGCGCATCCTGGGC...TGGAATGGGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCCCGCCGAGTCCCAGATaGAGGCATGCAGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRPPSPR*RHAACC
Trigger: ACAACAAGCTGCATGCCTTCATCTGGGACTCGGCGG...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGCCGCCGAGTCCCAGATaGAGGCATGCAGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGPPSPR*RHAACC
Trigger: ACAACAAGCTGCATGCCTTCATCTGGGACTCGGCGG...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCATTCTCGTGGGACTTaGGGATGGACAGGGAGACGT +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAHSRGT*GWTGRR
Trigger: ACGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATG...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCTGTCCAGGTCTTCCATaGAGCCATTCTCGTGGGACT +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGCPGLP*SHSRGT
Trigger: AGTCCCACGAGAATGGCTTCATGGAAGACCTGGACA...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGCGCGAGTCACATTCCTaGTACCGAACCCACGTCTTG +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQRESHS*YRTHVL
Trigger: CAAGACGTGGGTTCGGTATCAGGAATGTGACTCGCG...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACCCCAGCTACCAGCATaGAGACCCCGGCCATGTTCT +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGPQLPA*RPRPCS
Trigger: AGAACATGGCCGGGGTCTTCATGCTGGTAGCTGGGG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCAGCTACCAGCATaGAGACCCCGGCCATGTTCT +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSPQLPA*RPRPCS
Trigger: AGAACATGGCCGGGGTCTTCATGCTGGTAGCTGGGG...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGTGTAGGCAATCTCGATaGAAATCAGGAAGATCCCGG +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSCRQSR*KSGRSR
Trigger: CCGGGATCTTCCTGATTTTCATCGAGATTGCCTACA...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAAGGACCTACGCCTCTTaGAGCTGGAAGCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGRTYAS*SWKPGW
Trigger: CCACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCT...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371561.8
CDS-3UTR TCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCTCACACCACGGTGCTaGCCGAGGGATCTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLLTPRC*PRDLRG
Trigger: ACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCTCACACCACGGTGCTaGCCGAGGGATCTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPLTPRC*PRDLRG
Trigger: ACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACGGAACATCTGCTCGTaGTTCCGCGTGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGRNICS*FRVLST
Trigger: GGTGCTGAGCACGCGGAAGCACGAGCAGATGTTCCG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCATGGCGTTGGGCTTGTaGGTGACGGAGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRMALGL*VTEVAL
Trigger: CAATGCCACCTCCGTCACGCACAAGCCCAACGCCAT...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGATGGCGTTGGGCTTGTaGGTGACGGAGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGMALGL*VTEVAL
Trigger: CAATGCCACCTCCGTCACGCACAAGCCCAACGCCAT...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACCGAGTAGATGGACATaGGGGTGGTCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGPSRWT*GWSAPA
Trigger: TGCTGGGGCTGACCACCCGCATGTCCATCTACTCGG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACAGTAGGGCGGCACGGTaGGCAGGAAGCTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDSRAAR*AGSSGG
Trigger: TCCACCTGAGCTTCCTGCGCACCGTGCCGCCCTACT...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCGTTCAGCATCGCGGCTaGGCGGTATACAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPVQHRG*AVYSGS
Trigger: GCTGCCACTGTATACCGCGCAGCCGCGATGCTGAAC...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGTTCAGCATCGCGGCTaGGCGGTATACAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLVQHRG*AVYSGS
Trigger: GCTGCCACTGTATACCGCGCAGCCGCGATGCTGAAC...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGGGGTGCCATTGTAGATaGCCACTTGCACCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPGCHCR*PLAPAC
Trigger: GCAAGCTGGTGCAAGTGGGCATCTACAATGGCACCC...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGGTGCCATTGTAGATaGCCACTTGCACCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQGCHCR*PLAPAC
Trigger: GCAAGCTGGTGCAAGTGGGCATCTACAATGGCACCC...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGGAAGTTCATGGTCCGTaGCAGCTTGATGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPAREVHGP*QLDEQV
Trigger: GACCTGCTCATCAAGCTGGCACGGACCATGAACTTC...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCGAAGTTCATGGTCCGTaGCAGCTTGATGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGEVHGP*QLDEQV
Trigger: GACCTGCTCATCAAGCTGGCACGGACCATGAACTTC...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGTCCACTCCTTCTTGTTaGTGTTGTTCACCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREASTPSC*CCSPAP
Trigger: AGGAGCGGGTGAACAACAGCAACAAGAAGGAGTGGA...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTACGATCATGTCTGCCTaGCCGCTGAGCAGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPTIMSA*PLSSSP
Trigger: GGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGT...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACACGATCATGTCTGCCTaGCCGCTGAGCAGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDTIMSA*PLSSSP
Trigger: GGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGT...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTCGCCACGATCATGTCTaGCTGCCCGCTGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPRHDHV*LPAEQL
Trigger: GAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCG...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCTATGCCGGTACATGGTaGTCAGCTCCACCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPYAGTW*SAPPGA
Trigger: GGCGCCAGGTGGAGCTGAGCACCATGTACCGGCATA...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCTTTGCGCATGCCTATaGCGAAGCCCGAGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRLCACL*RSPSGK
Trigger: TTTTCCGCTCGGGCTTCGGCATAGGCATGCGCAAAG...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTGGCTGTCTTTGCGCATaGCTATGCCGAAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSGCLCA*LCRSPS
Trigger: GCTCGGGCTTCGGCATAGGCATGCGCAAAGACAGCC...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGGCTGTCTTTGCGCATaGCTATGCCGAAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPGCLCA*LCRSPS
Trigger: GCTCGGGCTTCGGCATAGGCATGCGCAAAGACAGCC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCGACAGGGAGACGTTCTaGTTCCAGGGGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAADRETF*FQGLSL
Trigger: CAAAGACAGCCCCTGGAAGCAGAACGTCTCCCTGTC...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCTCGCAGGGGCGTTGCTaGGCGAGTCACATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRSQGRC*ASHIPD
Trigger: ATCAGGAATGTGACTCGCGCAGCAACGCCCCTGCGA...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCAAGGCCAGCTGCATCTaGTTCCGGCGAGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRKASCI*FRRASL
Trigger: CAAGGATGCTCGCCGGAAGCAGATGCAGCTGGCCTT...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GCGCGCTCGTTGTTTATGGTTAGCGGCGCCACGATCATGTCTGCCTGCCCGCTGAGGCTTGGAGCAGGGTaGGTGGCCTCCCTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: ARSLFMVSGATIMSACPLRLGAG*VASLGP
Trigger: GGGGCCGAGGGAGGCCACGCACCCTGCTCCAAGCCT...CAGCGGGCAGGCAGACATGATCGTGGCGCCGCTAACCATAAACAACGAGCGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTGGCGTTGGCCAGGTGGCCTGTaGCCGCCAGTGCTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: APPGAGSRYPRSSASPWRWPGGL*PPVLAA
Trigger: CGCTGCCAGCACTGGCGGGCACAGGCCACCTGGCCA...ACGCCACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp CAGGACGCCCCAGGAGAACCACATGGCCGAGGACAGGGTCAGTGCGTCCTCCTCGCCCTCGCTCCTGCCTaGCTCCCTGTGCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: QDAPGEPHGRGQGQCVLLALAPA*LPVLDR
Trigger: TCTGTCCAGCACAGGGAGGCAGGCAGGAGCGAGGGC...GAGGAGGACGCACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGGGCGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GCTCAGCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTGCCCTCGCCTGCTCCTaGATGGGCCGCTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: AQLHLAPEVDIHGALLHRALACS*MGRCPA
Trigger: GGCTGGGCAGCGGCCCATGCAGGAGCAGGCGAGGGC...ACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGCTGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGTTGCCGTTGATGAGCTaGAGCCCGAGGATGCCGTCT +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGLPLMS*SPRMPS
Trigger: AGACGGCATCCTCGGGCTGCAGCTCATCAACGGCAA...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGGTGTCTTTTTGGTTTTaGAAAGCGCCGCGTCCACCC +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARVSFWF*KAPRPP
Trigger: GGGTGGACGCGGCGCTTTGCAAAACCAAAAAGACAC...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAGCCGACTCAGCTCTaGCCCGTCCTCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGQPTQL*PVLSRS
Trigger: GGAGCGGCTGAGGACGGGGCAGAGCTGAGTCGGCTG...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTAGGCCCGTTCTGGGCTaGAGGCCGGACGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPRPVLG*RPDEER
Trigger: CCTCTCCTCGTCCGGCCTGCAGCCCAGAACGGGCCT...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACTCGGGCCCTGGGAGTaGTGGTTCTGTACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGLGPWE*WFCTRW
Trigger: CCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCCTCGGGCCCTGGGAGTaGTGGTTCTGTACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPLGPWE*WFCTRW
Trigger: CCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAG...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCTCGGGCCCTGGGAGTaGTGGTTCTGTACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLLGPWE*WFCTRW
Trigger: CCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTTTTAGGCATCACCACTaGATACACCGGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSFRHHH*IHREVG
Trigger: CCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCTTTAGGCATCACCACTaGATACACCGGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPFRHHH*IHREVG
Trigger: CCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGTTTAGGCATCACCACTaGATACACCGGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRFRHHH*IHREVG
Trigger: CCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCTCTTGTCCGAGTAGATaGACATGCGGGTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPSCPSR*TCGWSA
Trigger: GGCTGACCACCCGCATGTCCATCTACTCGGACAAGA...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGTCTTGTCCGAGTAGATaGACATGCGGGTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQSCPSR*TCGWSA
Trigger: GGCTGACCACCCGCATGTCCATCTACTCGGACAAGA...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCTCTCAAACCACACGCTaGACTGGTGGGAGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRSQTTR*TGGSRA
Trigger: CGCCCTACTCCCACCAGTCCAGCGTGTGGTTTGAGA...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCACCTTCTCTGCCTTaGGTCCGCGCTTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQAPSLP*VRACCH
Trigger: ATGACAACAAGCGCGGACCCAAGGCAGAGAAGGTGC...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371555.8
ENST00000371560.4
CDS-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCTGCGCGGTATACAGTaGCAGCATCGTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPLRGIQ*QHRPRW
Trigger: CCAGCGAGGACGATGCTGCCACTGTATACCGCGCAG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCTGCGCGGTATACAGTaGCAGCATCGTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLLRGIQ*QHRPRW
Trigger: CCAGCGAGGACGATGCTGCCACTGTATACCGCGCAG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GCTCAGCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTAGCTCGTGCACGGCCTaGGCCACCACGCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: AQLHLAPEVDIHGALLHRSSCTA*ATTPTA
Trigger: CGCCGTGGGCGTGGTGGCCCAGGCCGTGCACGAGCT...ACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGCTGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCGGTCTTCCAGATGTTaGTGTTGCCCACGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSRSSRC*CCPRSP
Trigger: GGGGCTGCGTGGGCAACACCAACATCTGGAAGACCG...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACGGTCTTCCAGATGTTaGTGTTGCCCACGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGRSSRC*CCPRSP
Trigger: GGGGCTGCGTGGGCAACACCAACATCTGGAAGACCG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCTCTGTCTCTCCGCCTaGCCAGATGATCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAALCLSA*PDDLPV
Trigger: GACAGGAAGATCATCTGGCCAGGCGGAGAGACAGAG...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGTCACAATCTTCAGTCTaGTGGACATCTGGTACCCTC +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSSQSSV*WTSGTL
Trigger: GAGGGTACCAGATGTCCACCAGACTGAAGATTGTGA...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGACGAAGGGCTCCTGGTaGATCGTCACAATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREATKGSW*IVTIFS
Trigger: ACTGAAGATTGTGACGATCCACCAGGAGCCCTTCGT...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCGCTCGTTGTTTATaGTTAGCGGCGCCACGATCA +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAARARCL*LAAPRS
Trigger: TGATCGTGGCGCCGCTAACCATAAACAACGAGCGCG...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGCGCGCTCGTTGTTTATaGTTAGCGGCGCCACGATCA +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPRARCL*LAAPRS
Trigger: TGATCGTGGCGCCGCTAACCATAAACAACGAGCGCG...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGAGCCACAGTGTGCTCTaGAACGGCTGCATGAACGAG +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRSHSVL*NGCMNE
Trigger: CTCGTTCATGCAGCCGTTCCAGAGCACACTGTGGCT...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCCCAGGAGAACCACATaGCCGAGGACAGGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPPRRTT*PRTGSV
Trigger: CACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TTCCGCCACACGTTAACGGCGGCAAAGGCCAGCTGCATCTGCTTCCGGCGAGCAACCGGCGGGCGACTCTaGAGACAGAGGGGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: FRHTLTAAKASCICFRRATGGRL*RQRGQA
Trigger: CGCCTGGCCCCTCTGTCTCCAGAGTCGCCCGCCGGT...TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGCCGTTAACGTGTGGCGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTGAACACAGCTGCAGCTaGCCCTCCTCCCTCTCAATA +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSEHSCS*PSSLSI
Trigger: TATTGAGAGGGAGGAGGGCCAGCTGCAGCTGTGTTC...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCGAACACAGCTGCAGCTaGCCCTCCTCCCTCTCAATA +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAEHSCS*PSSLSI
Trigger: TATTGAGAGGGAGGAGGGCCAGCTGCAGCTGTGTTC...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGAACACAGCTGCAGCTaGCCCTCCTCCCTCTCAATA +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLREHSCS*PSSLSI
Trigger: TATTGAGAGGGAGGAGGGCCAGCTGCAGCTGTGTTC...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACCACTGTGGCTCAGGCTaGTGCTGCGGGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDHCGSG*CCGKDG
Trigger: CCCATCCTTCCCGCAGCACCAGCCTGAGCCACAGTG...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTCACTGTGGCTCAGGCTaGTGCTGCGGGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPHCGSG*CCGKDG
Trigger: CCCATCCTTCCCGCAGCACCAGCCTGAGCCACAGTG...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACTGGTTCTGTACAAGGTaGCGGGCCGGTCACGCACCC +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDWFCTR*RAGHAP
Trigger: GGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCA...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACGGGCCCTGGGAGTGCTaGTTCTGTACAAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDGPWEC*FCTRWR
Trigger: CCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGCCCTGGGAGTGCTaGTTCTGTACAAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPGPWEC*FCTRWR
Trigger: CCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTCACGCGCTCGGGCCCTaGGAGTGCTGGTTCTGTACA +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPHALGP*ECWFCT
Trigger: TGTACAGAACCAGCACTCCCAGGGCCCGAGCGCGTG...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGCCATGTTCTCAAAAGTAAGGGTCGCAGGGGCGTTGCTGCGCGAGTCACATTCCGAGGGAAGGGGCGCTaGAGCGTGCGCGGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: GHVLKSKGRRGVAARVTFRGKGR*SVRGGS
Trigger: CGAGCCCCCGCGCACGCTTCAGCGCCCCTTCCCTCG...GAATGTGACTCGCGCAGCAACGCCCCTGCGACCCTTACTTTTGAGAACATGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGAGGTGGCATTGAGCTaGATCTTCCAGGAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLEVALS*IFQEPC
Trigger: GCACGGCTCCTGGAAGATTCAGCTCAATGCCACCTC...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAGAGGTGGCATTGAGCTaGATCTTCCAGGAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGEVALS*IFQEPC
Trigger: GCACGGCTCCTGGAAGATTCAGCTCAATGCCACCTC...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACAGACCTGGCTGGAGATaGGGTCCTCGCACACCGACA +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDRPGWR*GPRTPT
Trigger: TGTCGGTGTGCGAGGACCTCATCTCCAGCCAGGTCT...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCCCGCGGCGGGTCGGTaGTGTTCTCCTTCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGPAAGR*CSPSRG
Trigger: TCCTCGAGAAGGAGAACATCACCGACCCGCCGCGGG...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCACATCAGCACTCTCTTaGAGAGCGGCCCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPTSALS*RAARSS
Trigger: GGAAGACCGGGCCGCTCTTCAAGAGAGTGCTGATGT...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGGGTTCTGCAGGTTCATaGTGCTGTAGTTGGCGAACT +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARGSAGS*CCSWRT
Trigger: AGTTCGCCAACTACAGCATCATGAACCTGCAGAACC...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTCACTCAGCGTGGGCTTaGCGTACACGAAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPHSAWA*RTRRAP
Trigger: AGGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTG...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTATGTCTGCCTGCCCGCTaGGCAGCTCGCCCATCATCC +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLCLPAR*AARPSS
Trigger: GGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACA...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGTCAGGCCCTGGTACTTaGAGGGCTTGGAAAACTCGA +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPSGPGT*RAWKTR
Trigger: TCGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGA...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTTCAGGCCCTGGTACTTaGAGGGCTTGGAAAACTCGA +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSSGPGT*RAWKTR
Trigger: TCGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGA...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTTGTAGGAGGCCACGATaGTCATGGCAAAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPCRRPR*SWQSRP
Trigger: GGGCCGGCTTTGCCATGATCATCGTGGCCTCCTACA...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACTGTAGGAGGCCACGATaGTCATGGCAAAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDCRRPR*SWQSRP
Trigger: GGGCCGGCTTTGCCATGATCATCGTGGCCTCCTACA...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCCGCCGAGTCCCAGATaGAGGCATGCAGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPPPSPR*RHAACC
Trigger: ACAACAAGCTGCATGCCTTCATCTGGGACTCGGCGG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTTGTCCAGGTCTTCCATaGAGCCATTCTCGTGGGACT +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSCPGLP*SHSRGT
Trigger: AGTCCCACGAGAATGGCTTCATGGAAGACCTGGACA...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTCCCCAGCTACCAGCATaGAGACCCCGGCCATGTTCT +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPPQLPA*RPRPCS
Trigger: AGAACATGGCCGGGGTCTTCATGCTGGTAGCTGGGG...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAGCTGACCGAGGGATCTaGGAGGTTGAGCGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLADRGI*EVERAR
Trigger: ACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGC...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCTGACCGAGGGATCTaGGAGGTTGAGCGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPADRGI*EVERAR
Trigger: ACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGC...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAGGTGCAGGGCAGGGTTaGAGACAGTCCCGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAGAGQG*RQSRAS
Trigger: GCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACC...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CAAGAGCGGGCGGATGAGAGGTGTGGAGCCTCCAGCAACCCCCATCCCCCAGCAGCTCGTGCTTCCGCGTaGTCAGCACCGCGCCAATGT +
Preference number: 4 (lower is better)
Translates to: QERADERCGASSNPHPPAARASA*SAPRQC
Trigger: ACATTGGCGCGGTGCTGAGCACGCGGAAGCACGAGC...TGCTGGGGGATGGGGGTTGCTGGAGGCTCCACACCTCTCATCCGCCCGCTCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTATCTTCCAGGAGCCGTaGCGCTTGTTGGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSIFQEP*RLLAWF
Trigger: GAACCAGGCCAACAAGCGGCACGGCTCCTGGAAGAT...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAATGGCGTTGGGCTTGTaGGTGACGGAGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGMALGL*VTEVAL
Trigger: CAATGCCACCTCCGTCACGCACAAGCCCAACGCCAT...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CAGGACGCCCCAGGAGAACCACATGGCCGAGGACAGGGTCAGTGCGTCCTCCTCGCCCCAGCACGGGTATaGGGTAGAAGCCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: QDAPGEPHGRGQGQCVLLAPARV*GRSRLC
Trigger: ACACAGCCGGCTTCTACCGCATACCCGTGCTGGGGC...GAGGAGGACGCACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGGGCGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCATCCAGATGTTGGTGTTaGCCACGCAGCCCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWASRCWC*PRSPAA
Trigger: CGCCGCGGGGCTGCGTGGGCAACACCAACATCTGGA...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTTCCAGATGTTGGTGTTaGCCACGCAGCCCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPSRCWC*PRSPAA
Trigger: CGCCGCGGGGCTGCGTGGGCAACACCAACATCTGGA...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGCCGAACTTGCCATCTaGCACCAGGTGCACCTCGTA +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPAELAI*HQVHLV
Trigger: TACGAGGTGCACCTGGTGGCAGATGGCAAGTTCGGC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCGCCGAACTTGCCATCTaGCACCAGGTGCACCTCGTA +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPAELAI*HQVHLV
Trigger: TACGAGGTGCACCTGGTGGCAGATGGCAAGTTCGGC...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCCTGTGTGCCGAACTTaGCATCTGCCACCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLPVCRT*HLPPGA
Trigger: TGCACCTGGTGGCAGATGGCAAGTTCGGCACACAGG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGATCACCCGCTCCTGTGTaGCGAACTTGCCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGSPAPV*RTCHLP
Trigger: TGGCAGATGGCAAGTTCGGCACACAGGAGCGGGTGA...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGTCACCCGCTCCTGTGTaGCGAACTTGCCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLSPAPV*RTCHLP
Trigger: TGGCAGATGGCAAGTTCGGCACACAGGAGCGGGTGA...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGTCCACTCCTTCTTGTTaGTGTTGTTCACCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWSTPSC*CCSPAP
Trigger: AGGAGCGGGTGAACAACAGCAACAAGAAGGAGTGGA...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCTCCACTCCTTCTTGTTaGTGTTGTTCACCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGSTPSC*CCSPAP
Trigger: AGGAGCGGGTGAACAACAGCAACAAGAAGGAGTGGA...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGTCCACTCCTTCTTGTTaGTGTTGTTCACCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARSTPSC*CCSPAP
Trigger: AGGAGCGGGTGAACAACAGCAACAAGAAGGAGTGGA...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TCCTATGGAATGGGTACCGGCGGGCGACTCTGGAGACAGAGGGGCCAGGCGGAGCGCCACGATCATGTCTaGCTGCCCGCTGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SYGMGTGGRLWRQRGQAERHDHV*LPAEQL
Trigger: GAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCG...CTCCGCCTGGCCCCTCTGTCTCCAGAGTCGCCCGCCGGTACCCATTCCATAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGTGCTCTGGAACGGCTaGATGAACGAGTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPVLWNG*MNESSV
Trigger: CACGCTGGACTCGTTCATGCAGCCGTTCCAGAGCAC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTATCACGGCCACCACGTaGACCGACAGCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPITATT*TDSPTS
Trigger: GCTGGTGGGGCTGTCGGTGCACGTGGTGGCCGTGAT...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGAGCCGGCCCACACCATaGCCAGGATGCGCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGSRPTP*PGCALR
Trigger: TCTCAGCGCGCATCCTGGGCATGGTGTGGGCCGGCT...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTTATGCCGGTACATGGTaGTCAGCTCCACCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPYAGTW*SAPPGA
Trigger: GGCGCCAGGTGGAGCTGAGCACCATGTACCGGCATA...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCTCCCAGATGAAGGCATaGAGCTTGTTGTCTCTCACG +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGSQMKA*SLLSLT
Trigger: CGTGAGAGACAACAAGCTGCATGCCTTCATCTGGGA...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGTCCCAGATGAAGGCATaGAGCTTGTTGTCTCTCACG +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWSQMKA*SLLSLT
Trigger: CGTGAGAGACAACAAGCTGCATGCCTTCATCTGGGA...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCTCGCAGGGGCGTTGCTaGGCGAGTCACATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPSQGRC*ASHIPD
Trigger: ATCAGGAATGTGACTCGCGCAGCAACGCCCCTGCGA...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTTCGCAGGGGCGTTGCTaGGCGAGTCACATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSSQGRC*ASHIPD
Trigger: ATCAGGAATGTGACTCGCGCAGCAACGCCCCTGCGA...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCAAGGCCAGCTGCATCTaGTTCCGGCGAGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPKASCI*FRRASL
Trigger: CAAGGATGCTCGCCGGAAGCAGATGCAGCTGGCCTT...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAAAGGCCAGCTGCATCTaGTTCCGGCGAGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGKASCI*FRRASL
Trigger: CAAGGATGCTCGCCGGAAGCAGATGCAGCTGGCCTT...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GCAGGTGGAGTCGGACGCGGGACTGGGGTGCTCTCCCCCTTACCGTGTCTTTGGGCGGCAAAGGCCAGCTaGATCTGCTTCCGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: AGGVGRGTGVLSPLPCLWAAKAS*ICFRRA
Trigger: TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGC...CCAAAGACACGGTAAGGGGGAGAGCACCCCAGTCCCGCGTCCGACTCCACCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp TGTCAAGGGGCTTGGGTCGGCGGAGGGCAAAATGCATCTTGGACTCACGTGCCAGCCTGTGCCCGCCAGTaGTGGCAGCGGCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: CQGAWVGGGQNASWTHVPACARQ*WQRPGP
Trigger: GGGACCTGGCCGCTGCCAGCACTGGCGGGCACAGGC...TGGCACGTGAGTCCAAGATGCATTTTGCCCTCCGCCGACCCAAGCCCCTTGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCTTGCCGTTGATGAGCTaGAGCCCGAGGATGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPLPLMS*SPRMPS
Trigger: AGACGGCATCCTCGGGCTGCAGCTCATCAACGGCAA...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTCGGGAAGGATGGGGCTaGCGTCTCTGCTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPREGWG*RLCSKP
Trigger: GGGCTTGGAGCAGAGACGGCAGCCCCATCCTTCCCG...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTCTCCCGTGCCCAAGGTaGAGGGCAGGGTTGAAGACA +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPLPCPR*RAGLKT
Trigger: TGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAG...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACCTCCCGTGCCCAAGGTaGAGGGCAGGGTTGAAGACA +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDLPCPR*RAGLKT
Trigger: TGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAG...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCTGCGTGGAGGCCACTGACCCCCAAGGGGCACACACCAAGATTCAGGAAGGGGGCGTCAGCAGGCGCATaGTGCTCATGGGCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: SAWRPLTPKGHTPRFRKGASAGA*CSWARA
Trigger: GGCCCGAGCCCATGAGCACCATGCGCCTGCTGACGC...CCCCTTCCTGAATCTTGGTGTGTGCCCCTTGGGGGTCAGTGGCCTCCACGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAAGCCGTGCCGCTTGTTaGCCTGGTTCACGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWASRAAC*PGSRPR
Trigger: GCGAGGCCGTGAACCAGGCCAACAAGCGGCACGGCT...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGAGCCGTGCCGCTTGTTaGCCTGGTTCACGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGSRAAC*PGSRPR
Trigger: GCGAGGCCGTGAACCAGGCCAACAAGCGGCACGGCT...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCACCGACAGAGCCATCTaGATGGCGTTGGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPTDRAI*MALGLC
Trigger: GCACAAGCCCAACGCCATCCAGATGGCTCTGTCGGT...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAACCGACAGAGCCATCTaGATGGCGTTGGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGTDRAI*MALGLC
Trigger: GCACAAGCCCAACGCCATCCAGATGGCTCTGTCGGT...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGGTGGGAGTGAAGTaGTCGTTGGGGGTAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPGVGVK*SLGVGG
Trigger: TCCACCTACCCCCAACGACCACTTCACTCCCACCCC...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACAGATGGACATGCGGGTaGTCAGCCCCAGCACGGGTA +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDRWTCG*SAPARV
Trigger: TACCCGTGCTGGGGCTGACCACCCGCATGTCCATCT...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCTCTCAAACCACACGCTaGACTGGTGGGAGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPSQTTR*TGGSRA
Trigger: CGCCCTACTCCCACCAGTCCAGCGTGTGGTTTGAGA...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTTCTCAAACCACACGCTaGACTGGTGGGAGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSSQTTR*TGGSRA
Trigger: CGCCCTACTCCCACCAGTCCAGCGTGTGGTTTGAGA...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCGCACCTTCTCTGCCTTaGGTCCGCGCTTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRAPSLP*VRACCH
Trigger: ATGACAACAAGCGCGGACCCAAGGCAGAGAAGGTGC...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371555.8
ENST00000371560.4
CDS-3UTR CCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTCACGTTCTTGGTCCCTaGGTCAAACTGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSHVLGP*VKLQHL
Trigger: AAGGTGCTGCAGTTTGACCCAGGGACCAAGAACGTG...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGCACGTTCTTGGTCCCTaGGTCAAACTGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPHVLGP*VKLQHL
Trigger: AAGGTGCTGCAGTTTGACCCAGGGACCAAGAACGTG...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTGGGCCGTCACGTTCTTaGTCCCTGGGTCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSGPSRS*SLGQTA
Trigger: TGCAGTTTGACCCAGGGACCAAGAACGTGACGGCCC...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACCTGCGCGGTATACAGTaGCAGCATCGTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDLRGIQ*QHRPRW
Trigger: CCAGCGAGGACGATGCTGCCACTGTATACCGCGCAG...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTACCGGCGACGTGTCGTTaGGCCCGGTGCAGATCACCT +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLPATCR*ARCRSP
Trigger: AGGTGATCTGCACCGGGCCCAACGACACGTCGCCGG...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGCGCGCTCGTTGTTTATaGTTAGCGGCGCCACGATCA +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGRARCL*LAAPRS
Trigger: TGATCGTGGCGCCGCTAACCATAAACAACGAGCGCG...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGAGAATAGTCAGGCCCTaGTACTTGAAGGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: EGLSPLESGGGGPRRREARIVRP*YLKGLE
Trigger: TTCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCT...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCAGCCACAGTGTGCTCTaGAACGGCTGCATGAACGAG +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRSHSVL*NGCMNE
Trigger: CTCGTTCATGCAGCCGTTCCAGAGCACACTGTGGCT...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCGCTGAGAAGCTTCTaGGGGCGCCTTCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPALRSF*GRLPRC
Trigger: GCATCGGGGAAGGCGCCCCCAGAAGCTTCTCAGCGC...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GTTAGCGGCGCCACGATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCGGAAGGCCGCCAGGTTaGCGGTGTAGGAGGCCACGA +
Preference number: 4 (lower is better)
Translates to: VSGATIMSACPLSSSPIIGRPPG*RCRRPR
Trigger: TCGTGGCCTCCTACACCGCCAACCTGGCGGCCTTCC...GATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCGCCGCTAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GCTCAGCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTCACGGCCTTCGGGGATaGAGGAGGGCCGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AQLHLAPEVDIHGALLHRHGLRG*RRAVAR
Trigger: CCTGGCCACGGCCCTCCTCCATCCCCGAAGGCCGTG...ACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGCTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp CGGCCTGGATGGCCTCCGCCGCACTCTCGTAGTTGTGCTTCTCCATATGCCGGTGCGGACGTTCGAGGGTaGCCTCTTCTCCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: RPGWPPPHSRSCASPYAGADVRG*PLLLPG
Trigger: CCCGGGCAGGAGAAGAGGCCACCCTCGAACGTCCGC...ACCGGCATATGGAGAAGCACAACTACGAGAGTGCGGCGGAGGCCATCCAGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GCAGGTGGAGTCGGACGCGGGACTGGGGTGCTCTCCCCCTTACCGTGTCTTTGGAGATGGCTAGGGTGGTaGCCACACCTGCCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: AGGVGRGTGVLSPLPCLWRWLGW*PHLPSP
Trigger: AGGCGAGGGCAGGTGTGGCCACCACCCTAGCCATCT...CCAAAGACACGGTAAGGGGGAGAGCACCCCAGTCCCGCGTCCGACTCCACCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAGTGCTGCGGGAAGGATaGGGCTGCCGTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLVLREG*GCRLCS
Trigger: GGAGCAGAGACGGCAGCCCCATCCTTCCCGCAGCAC...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAGACGGGGTGTGGGTaGGCGGTGCCGCAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGQTGCG*AVPQEE
Trigger: CTCTTCTTGCGGCACCGCCCACCCACACCCCGTCTG...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTGCACCTTCTCTGCCTTaGACTCACGCTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSAPSLP*THAPPA
Trigger: TGCTGGAGGAGCGTGAGTCCAAGGCAGAGAAGGTGC...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371550.8
ENST00000371559.8
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCGCACCTTCTCTGCCTTaGACTCACGCTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPAPSLP*THAPPA
Trigger: TGCTGGAGGAGCGTGAGTCCAAGGCAGAGAAGGTGC...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371550.8
ENST00000371561.8
CDS-3UTR TCA 90 bp TGTGCCGAACTTGCCATCTGCCACCAGGTGCACCTCGTAGGTGAAGTTCATGGTCGCTGTCCGCGGTGCTaGAGCGGGGCCGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: CAELAICHQVHLVGEVHGRCPRC*SGAGHS
Trigger: GCTGTGCCCGGCCCCGCTTCAGCACCGCGGACAGCG...ACCATGAACTTCACCTACGAGGTGCACCTGGTGGCAGATGGCAAGTTCGGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp TCCTATGGAATGGGTACCGGCGGGCGACTCTGGAGACAGAGGGGCCAGGCGGAGAGACCTGGCTGGAGATaGGGTCCTCGCACACCGACA +
Preference number: 4 (lower is better)
Translates to: SYGMGTGGRLWRQRGQAERPGWR*GPRTPT
Trigger: TGTCGGTGTGCGAGGACCTCATCTCCAGCCAGGTCT...CTCCGCCTGGCCCCTCTGTCTCCAGAGTCGCCCGCCGGTACCCATTCCATAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTACATCAGCACTCTCTTaGAGAGCGGCCCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPTSALS*RAARSS
Trigger: GGAAGACCGGGCCGCTCTTCAAGAGAGTGCTGATGT...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTGGTTCTGCAGGTTCATaGTGCTGTAGTTGGCGAACT +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSGSAGS*CCSWRT
Trigger: AGTTCGCCAACTACAGCATCATGAACCTGCAGAACC...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGTCAGGCCCTGGTACTTaGAGGGCTTGGAAAACTCGA +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGSGPGT*RAWKTR
Trigger: TCGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGA...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCTCAGGCCCTGGTACTTaGAGGGCTTGGAAAACTCGA +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRSGPGT*RAWKTR
Trigger: TCGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGA...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CAAGAGCGGGCGGATGAGAGGTGTGGAGCCTCCAGCAACCCCCATCCCCCAGCATCTGGAACGGCTGCATaGACGAGTCCAGCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QERADERCGASSNPHPPASGTAA*TSPACS
Trigger: GGAGCACGCTGGACTCGTTCATGCAGCCGTTCCAGA...TGCTGGGGGATGGGGGTTGCTGGAGGCTCCACACCTCTCATCCGCCCGCTCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCATTCTCGTGGGACTTaGGGATGGACAGGGAGACGT +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSHSRGT*GWTGRR
Trigger: ACGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATG...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCCGCGAGTCACATTCCTaGTACCGAACCCACGTCTTG +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPRESHS*YRTHVL
Trigger: CAAGACGTGGGTTCGGTATCAGGAATGTGACTCGCG...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp GCAGGTGGAGTCGGACGCGGGACTGGGGTGCTCTCCCCCTTACCGTGTCTTTGGCCCCAGCTACCAGCATaGAGACCCCGGCCATGTTCT +
Preference number: 4 (lower is better)
Translates to: AGGVGRGTGVLSPLPCLWPQLPA*RPRPCS
Trigger: AGAACATGGCCGGGGTCTTCATGCTGGTAGCTGGGG...CCAAAGACACGGTAAGGGGGAGAGCACCCCAGTCCCGCGTCCGACTCCACCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGTGTAGGCAATCTCGATaGAAATCAGGAAGATCCCGG +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARCRQSR*KSGRSR
Trigger: CCGGGATCTTCCTGATTTTCATCGAGATTGCCTACA...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp AGGTGGCCTGTGCCCGCCAGTGCTGGCAGCGGCCAGGTCCCCAGGGGACCTGTGCTGTCTTACCCTGCCTaGTTGCCTTCCTATGGAATG +
Preference number: 4 (lower is better)
Translates to: RWPVPASAGSGQVPRGPVLSYPA*LPSYGM
Trigger: CATTCCATAGGAAGGCAATCAGGCAGGGTAAGACAG...CACAGGTCCCCTGGGGACCTGGCCGCTGCCAGCACTGGCGGGCACAGGCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp CTGTCGGCTTCATCTCAGGACACAGGCTCCAGGACGGCACCCAGAGAAAGAGAACCGGGGTCTCGGGCCTaGCCTTGCTCGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LSASSQDTGSRTAPREREPGSRA*PCSCWG
Trigger: GCCCCAGCACGAGCAAGGTCAGGCCCGAGACCCCGG...TTCTCTTTCTCTGGGTGCCGTCCTGGAGCCTGTGTCCTGAGATGAAGCCGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGGCCTCGCGGAACATCTaGTCGTGCTTCCGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGASRNI*SCFRVL
Trigger: GAGCACGCGGAAGCACGAGCAGATGTTCCGCGAGGC...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAGCCTCGCGGAACATCTaGTCGTGCTTCCGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLASRNI*SCFRVL
Trigger: GAGCACGCGGAAGCACGAGCAGATGTTCCGCGAGGC...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAGCCTCGCGGAACATCTaGTCGTGCTTCCGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAASRNI*SCFRVL
Trigger: GAGCACGCGGAAGCACGAGCAGATGTTCCGCGAGGC...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACATCTTCCAGGAGCCGTaGCGCTTGTTGGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDIFQEP*RLLAWF
Trigger: GAACCAGGCCAACAAGCGGCACGGCTCCTGGAAGAT...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAGCCCCAGCACGGGTATaGGGTAGAAGCCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAAPARV*GRSRLC
Trigger: ACACAGCCGGCTTCTACCGCATACCCGTGCTGGGGC...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAGCCCCAGCACGGGTATaGGGTAGAAGCCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLAPARV*GRSRLC
Trigger: ACACAGCCGGCTTCTACCGCATACCCGTGCTGGGGC...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGGCCCCAGCACGGGTATaGGGTAGAAGCCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGAPARV*GRSRLC
Trigger: ACACAGCCGGCTTCTACCGCATACCCGTGCTGGGGC...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTAGTAGGGCGGCACGGTaGGCAGGAAGCTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPSRAAR*AGSSGG
Trigger: TCCACCTGAGCTTCCTGCGCACCGTGCCGCCCTACT...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTGGCGTTTCTCGAGGAGCTCGTaGACGGCCTGGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: APPGAGSRYPRSSASPWRFSRSS*TAWATT
Trigger: CGTGGTGGCCCAGGCCGTGCACGAGCTCCTCGAGAA...ACGCCACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCGGGTGCCATTGTAGATaGCCACTTGCACCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPGCHCR*PLAPAC
Trigger: GCAAGCTGGTGCAAGTGGGCATCTACAATGGCACCC...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGGGTGCCATTGTAGATaGCCACTTGCACCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPGCHCR*PLAPAC
Trigger: GCAAGCTGGTGCAAGTGGGCATCTACAATGGCACCC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTCCTGTGTGCCGAACTTaGCATCTGCCACCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPPVCRT*HLPPGA
Trigger: TGCACCTGGTGGCAGATGGCAAGTTCGGCACACAGG...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp AGGTGGCCTGTGCCCGCCAGTGCTGGCAGCGGCCAGGTCCCCAGGGGACCTGTGTCCACTCCTTCTTGTTaGTGTTGTTCACCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RWPVPASAGSGQVPRGPVSTPSC*CCSPAP
Trigger: AGGAGCGGGTGAACAACAGCAACAAGAAGGAGTGGA...CACAGGTCCCCTGGGGACCTGGCCGCTGCCAGCACTGGCGGGCACAGGCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCTCCACTCCTTCTTGTTaGTGTTGTTCACCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPSTPSC*CCSPAP
Trigger: AGGAGCGGGTGAACAACAGCAACAAGAAGGAGTGGA...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTACGATCATGTCTGCCTaGCCGCTGAGCAGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPTIMSA*PLSSSP
Trigger: GGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGT...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACGATCATGTCTGCCTaGCCGCTGAGCAGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLTIMSA*PLSSSP
Trigger: GGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGT...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCGCCACGATCATGTCTaGCTGCCCGCTGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGRHDHV*LPAEQL
Trigger: GAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCG...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGGAAAACTCGATGTACTaGGCGCGCTCGTTGTTTATG +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWENSMY*ARSLFM
Trigger: CATAAACAACGAGCGCGCGCAGTACATCGAGTTTTC...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCACGAGGACAGGGTCAGTaGGTCCTCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWARGQGQ*VLLLLL
Trigger: GAGGAGGAGGAGGAGGACGCACTGACCCTGTCCTCG...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCTTGTGCTTCTCCATATaGCGGTACATGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAALCFSI*RYMVLS
Trigger: GCTGAGCACCATGTACCGGCATATGGAGAAGCACAA...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGTTGTGCTTCTCCATATaGCGGTACATGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRLCFSI*RYMVLS
Trigger: GCTGAGCACCATGTACCGGCATATGGAGAAGCACAA...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGTTGTGCTTCTCCATATaGCGGTACATGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPLCFSI*RYMVLS
Trigger: GCTGAGCACCATGTACCGGCATATGGAGAAGCACAA...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCTCCCAGATGAAGGCATaGAGCTTGTTGTCTCTCACG +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPSQMKA*SLLSLT
Trigger: CGTGAGAGACAACAAGCTGCATGCCTTCATCTGGGA...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGTCCCAGATGAAGGCATaGAGCTTGTTGTCTCTCACG +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQSQMKA*SLLSLT
Trigger: CGTGAGAGACAACAAGCTGCATGCCTTCATCTGGGA...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCTTTGCGCATGCCTATaGCGAAGCCCGAGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSLCACL*RSPSGK
Trigger: TTTTCCGCTCGGGCTTCGGCATAGGCATGCGCAAAG...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCTTTGCGCATGCCTATaGCGAAGCCCGAGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPLCACL*RSPSGK
Trigger: TTTTCCGCTCGGGCTTCGGCATAGGCATGCGCAAAG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACTTTGCGCATGCCTATaGCGAAGCCCGAGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGLCACL*RSPSGK
Trigger: TTTTCCGCTCGGGCTTCGGCATAGGCATGCGCAAAG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGACAGGGAGACGTTCTaGTTCCAGGGGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPDRETF*FQGLSL
Trigger: CAAAGACAGCCCCTGGAAGCAGAACGTCTCCCTGTC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTGACAGGGAGACGTTCTaGTTCCAGGGGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSDRETF*FQGLSL
Trigger: CAAAGACAGCCCCTGGAAGCAGAACGTCTCCCTGTC...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCGACAGGGAGACGTTCTaGTTCCAGGGGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPDRETF*FQGLSL
Trigger: CAAAGACAGCCCCTGGAAGCAGAACGTCTCCCTGTC...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTTCGCAGGGGCGTTGCTaGGCGAGTCACATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPSQGRC*ASHIPD
Trigger: ATCAGGAATGTGACTCGCGCAGCAACGCCCCTGCGA...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAGGGTCGCAGGGGCGTTaGTGCGCGAGTCACATTCCT +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAGSQGR*CASHIP
Trigger: AGGAATGTGACTCGCGCAGCAACGCCCCTGCGACCC...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGGCCTGGATGGCCTCCGCCGCACTCTCGTAGTTGTGCTTCTCCATATGCCGGTGCCACACCAGCTGTCTaGGTGGAGGCCACTGACCCC +
Preference number: 4 (lower is better)
Translates to: RPGWPPPHSRSCASPYAGATPAV*VEATDP
Trigger: GGGGTCAGTGGCCTCCACGCAGACAGCTGGTGTGGC...ACCGGCATATGGAGAAGCACAACTACGAGAGTGCGGCGGAGGCCATCCAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTTTGCCGTTGATGAGCTaGAGCCCGAGGATGCCGTCT +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPLPLMS*SPRMPS
Trigger: AGACGGCATCCTCGGGCTGCAGCTCATCAACGGCAA...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTTTTAGGCATCACCACTaGATACACCGGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSFRHHH*IHREVG
Trigger: CCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCTGCGTGGAGGCCACTGACCCCCAAGGGGCACACACCAAGATTCAGGAAGGGGAGCCGTGCCGCTTGTTaGCCTGGTTCACGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: SAWRPLTPKGHTPRFRKGSRAAC*PGSRPR
Trigger: GCGAGGCCGTGAACCAGGCCAACAAGCGGCACGGCT...CCCCTTCCTGAATCTTGGTGTGTGCCCCTTGGGGGTCAGTGGCCTCCACGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCTCTTGTCCGAGTAGATaGACATGCGGGTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPSCPSR*TCGWSA
Trigger: GGCTGACCACCCGCATGTCCATCTACTCGGACAAGA...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTTCTCAAACCACACGCTaGACTGGTGGGAGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPSQTTR*TGGSRA
Trigger: CGCCCTACTCCCACCAGTCCAGCGTGTGGTTTGAGA...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGCACGTTCTTGGTCCCTaGGTCAAACTGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGHVLGP*VKLQHL
Trigger: AAGGTGCTGCAGTTTGACCCAGGGACCAAGAACGTG...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACGGCGTCGCTGATGTaGGCCGACTCGTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLTASLM*ADSFLP
Trigger: CGGCAAGAACGAGTCGGCCCACATCAGCGACGCCGT...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGACGGCGTCGCTGATGTaGGCCGACTCGTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGTASLM*ADSFLP
Trigger: CGGCAAGAACGAGTCGGCCCACATCAGCGACGCCGT...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTACGGCGTCGCTGATGTaGGCCGACTCGTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPTASLM*ADSFLP
Trigger: CGGCAAGAACGAGTCGGCCCACATCAGCGACGCCGT...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCCCATCCGCATACTTaGAAGACATCAGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRPHPHT*KTSALS
Trigger: AGAGAGTGCTGATGTCTTCCAAGTATGCGGATGGGG...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCTCTGTCTCTCCGCCTaGCCAGATGATCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPLCLSA*PDDLPV
Trigger: GACAGGAAGATCATCTGGCCAGGCGGAGAGACAGAG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCTCTGTCTCTCCGCCTaGCCAGATGATCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLLCLSA*PDDLPV
Trigger: GACAGGAAGATCATCTGGCCAGGCGGAGAGACAGAG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGAGTCTGGTGGACATCTaGTACCCTCGAGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGSLVDI*YPRGFS
Trigger: AGAGAAGCCTCGAGGGTACCAGATGTCCACCAGACT...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGCAATCTTCAGTCTGGTaGACATCTGGTACCCTCGAG +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQQSSVW*TSGTLE
Trigger: CTCGAGGGTACCAGATGTCCACCAGACTGAAGATTG...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGCAATCTTCAGTCTGGTaGACATCTGGTACCCTCGAG +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPQSSVW*TSGTLE
Trigger: CTCGAGGGTACCAGATGTCCACCAGACTGAAGATTG...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCACGAAGGGCTCCTGGTaGATCGTCACAATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LGRWAPPGASHHGADRGITKGSW*IVTIFS
Trigger: ACTGAAGATTGTGACGATCCACCAGGAGCCCTTCGT...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCACGAAGGGCTCCTGGTaGATCGTCACAATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPTKGSW*IVTIFS
Trigger: ACTGAAGATTGTGACGATCCACCAGGAGCCCTTCGT...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGACGAAGGGCTCCTGGTaGATCGTCACAATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPTKGSW*IVTIFS
Trigger: ACTGAAGATTGTGACGATCCACCAGGAGCCCTTCGT...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGTACACGAAGGGCTCCTaGTGGATCGTCACAATCTTC +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQYTKGS*WIVTIF
Trigger: GAAGATTGTGACGATCCACCAGGAGCCCTTCGTGTA...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGTACACGAAGGGCTCCTaGTGGATCGTCACAATCTTC +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPYTKGS*WIVTIF
Trigger: GAAGATTGTGACGATCCACCAGGAGCCCTTCGTGTA...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGTACACGAAGGGCTCCTaGTGGATCGTCACAATCTTC +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRYTKGS*WIVTIF
Trigger: GAAGATTGTGACGATCCACCAGGAGCCCTTCGTGTA...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCTACACGAAGGGCTCCTaGTGGATCGTCACAATCTTC +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAYTKGS*WIVTIF
Trigger: GAAGATTGTGACGATCCACCAGGAGCCCTTCGTGTA...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGATCACCTTCTTGACTaGGTCGCCGTTGACTGTGAA +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPDHLLD*VAVDCE
Trigger: TTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATC...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTGGCGTCCGGCGACGTGTCGTTaGGCCCGGTGCAGATCACCT +
Preference number: 4 (lower is better)
Translates to: APPGAGSRYPRSSASPWRPATCR*ARCRSP
Trigger: AGGTGATCTGCACCGGGCCCAACGACACGTCGCCGG...ACGCCACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCGCGCTCGTTGTTTATaGTTAGCGGCGCCACGATCA +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLRARCL*LAAPRS
Trigger: TGATCGTGGCGCCGCTAACCATAAACAACGAGCGCG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCAGAATAGTCAGGCCCTaGTACTTGAAGGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSRIVRP*YLKGLE
Trigger: TTCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCT...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGAGAATAGTCAGGCCCTaGTACTTGAAGGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARRIVRP*YLKGLE
Trigger: TTCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCT...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCAGAATAGTCAGGCCCTaGTACTTGAAGGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGRIVRP*YLKGLE
Trigger: TTCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCT...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTAGCCACAGTGTGCTCTaGAACGGCTGCATGAACGAG +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSSHSVL*NGCMNE
Trigger: CTCGTTCATGCAGCCGTTCCAGAGCACACTGTGGCT...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCAGCCACAGTGTGCTCTaGAACGGCTGCATGAACGAG +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPSHSVL*NGCMNE
Trigger: CTCGTTCATGCAGCCGTTCCAGAGCACACTGTGGCT...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTTTGTCTCTCACGGCCTaGATGGCCTCCGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPLSLTA*MASAAL
Trigger: GAGTGCGGCGGAGGCCATCCAGGCCGTGAGAGACAA...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGTTGTCTCTCACGGCCTaGATGGCCTCCGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGLSLTA*MASAAL
Trigger: GAGTGCGGCGGAGGCCATCCAGGCCGTGAGAGACAA...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGATGAAGCCATTCTCGTaGGACTTGAGGATGGACAGG +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQMKPFS*DLRMDR
Trigger: CCTGTCCATCCTCAAGTCCCACGAGAATGGCTTCAT...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCATGAAGCCATTCTCGTaGGACTTGAGGATGGACAGG +
Preference number: 4 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPMKPFS*DLRMDR
Trigger: CCTGTCCATCCTCAAGTCCCACGAGAATGGCTTCAT...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCATGAAGCCATTCTCGTaGGACTTGAGGATGGACAGG +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAMKPFS*DLRMDR
Trigger: CCTGTCCATCCTCAAGTCCCACGAGAATGGCTTCAT...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CCAGGTGGGCCGTGGCTGCCCTTGCTGGTGGCAAATTCTCATGGATACAACCTGTCGCCTGCTCCTGCATaGGCCGCTGCCCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PGGPWLPLLVANSHGYNLSPAPA*AAAQPG
Trigger: GCCAGGCTGGGCAGCGGCCCATGCAGGAGCAGGCGA...CAGGTTGTATCCATGAGAATTTGCCACCAGCAAGGGCAGCCACGGCCCACCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp TCTGCGTGGAGGCCACTGACCCCCAAGGGGCACACACCAAGATTCAGGAAGGGGAGTCGGACGCGGGACTaGGGTGCTCTCCCCCTTACC +
Preference number: 4 (lower is better)
Translates to: SAWRPLTPKGHTPRFRKGSRTRD*GALPLT
Trigger: GGTAAGGGGGAGAGCACCCCAGTCCCGCGTCCGACT...CCCCTTCCTGAATCTTGGTGTGTGCCCCTTGGGGGTCAGTGGCCTCCACGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GTTGGGCCCGGTGCAGATCACCTTCTTGACTGGGTCGCCGTTGACTGTGAACTCGCAGGGCAGGGCAGGTaGAGTCGGACGCGGGACTGG +
Preference number: 4 (lower is better)
Translates to: VGPGADHLLDWVAVDCELAGQGR*SRTRDW
Trigger: CCAGTCCCGCGTCCGACTCCACCTGCCCTGCCCTGC...GAGTTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCACCGGGCCCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGAGCACTGTGTCTTTTTaGTTTTGCAAAGCGCCGCGT +
Preference number: 4 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWSTVSF*FCKAPR
Trigger: ACGCGGCGCTTTGCAAAACCAAAAAGACACAGTGCT...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGAACACAGCTGCAGCTaGCCCTCCTCCCTCTCAATA +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLEHSCS*PSSLSI
Trigger: TATTGAGAGGGAGGAGGGCCAGCTGCAGCTGTGTTC...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCACTGTGGCTCAGGCTaGTGCTGCGGGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGHCGSG*CCGKDG
Trigger: CCCATCCTTCCCGCAGCACCAGCCTGAGCCACAGTG...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAGGGCCCTGGGAGTGCTaGTTCTGTACAAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAGPWEC*FCTRWR
Trigger: CCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGGGCCCTGGGAGTGCTaGTTCTGTACAAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPGPWEC*FCTRWR
Trigger: CCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCACGCGCTCGGGCCCTaGGAGTGCTGGTTCTGTACA +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGHALGP*ECWFCT
Trigger: TGTACAGAACCAGCACTCCCAGGGCCCGAGCGCGTG...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACGCACCTTCTCTGCCTTaGACTCACGCTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDAPSLP*THAPPA
Trigger: TGCTGGAGGAGCGTGAGTCCAAGGCAGAGAAGGTGC...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371550.8
ENST00000371559.8
ENST00000371561.8
CDS-3UTR TCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGAGACCTGGCTGGAGATaGGGTCCTCGCACACCGACA +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGRPGWR*GPRTPT
Trigger: TGTCGGTGTGCGAGGACCTCATCTCCAGCCAGGTCT...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GTTGGGCCCGGTGCAGATCACCTTCTTGACTGGGTCGCCGTTGACTGTGAACTCCGCCCACGGCGTCGCTaGTGTGGGCCGACTCGTTCT +
Preference number: 4 (lower is better)
Translates to: VGPGADHLLDWVAVDCELRPRRR*CGPTRS
Trigger: AGAACGAGTCGGCCCACATCAGCGACGCCGTGGGCG...GAGTTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCACCGGGCCCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTCACTCAGCGTGGGCTTaGCGTACACGAAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPHSAWA*RTRRAP
Trigger: AGGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTG...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCATCTGGAACGGCTGCATaGACGAGTCCAGCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWASGTAA*TSPACS
Trigger: GGAGCACGCTGGACTCGTTCATGCAGCCGTTCCAGA...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGTGTAGGAGGCCACGATaGTCATGGCAAAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGCRRPR*SWQSRP
Trigger: GGGCCGGCTTTGCCATGATCATCGTGGCCTCCTACA...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTCATTCTCGTGGGACTTaGGGATGGACAGGGAGACGT +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPHSRGT*GWTGRR
Trigger: ACGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATG...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTTGTCCAGGTCTTCCATaGAGCCATTCTCGTGGGACT +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSCPGLP*SHSRGT
Trigger: AGTCCCACGAGAATGGCTTCATGGAAGACCTGGACA...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTACCCCAGCTACCAGCATaGAGACCCCGGCCATGTTCT +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLPQLPA*RPRPCS
Trigger: AGAACATGGCCGGGGTCTTCATGCTGGTAGCTGGGG...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCACCCCAGCTACCAGCATaGAGACCCCGGCCATGTTCT +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAPQLPA*RPRPCS
Trigger: AGAACATGGCCGGGGTCTTCATGCTGGTAGCTGGGG...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGTGTAGGCAATCTCGATaGAAATCAGGAAGATCCCGG +
Preference number: 4 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQCRQSR*KSGRSR
Trigger: CCGGGATCTTCCTGATTTTCATCGAGATTGCCTACA...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGTGTAGGCAATCTCGATaGAAATCAGGAAGATCCCGG +
Preference number: 4 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRCRQSR*KSGRSR
Trigger: CCGGGATCTTCCTGATTTTCATCGAGATTGCCTACA...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCTGTAGGCAATCTCGATaGAAATCAGGAAGATCCCGG +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAACRQSR*KSGRSR
Trigger: CCGGGATCTTCCTGATTTTCATCGAGATTGCCTACA...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GTTAGCGGCGCCACGATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCGAGGTGGAATTGGAGTaGCAGAGGCAGCTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: VSGATIMSACPLSSSPIIEVELE*QRQLPG
Trigger: TCCCGGGAGCTGCCTCTGTCACTCCAATTCCACCTC...GATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCGCCGCTAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp TTCCGCCACACGTTAACGGCGGCAAAGGCCAGCTGCATCTGCTTCCGGCGAGCAGGAGGAGGAGTCCTCTaGGGACTGGAGGAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: FRHTLTAAKASCICFRRAGGGVL*GLEELP
Trigger: GGGCAACTCCTCCAGTCCTCAGAGGACTCCTCCTCC...TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGCCGTTAACGTGTGGCGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTACTCACACCACGGTGCTaGCCGAGGGATCTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLLTPRC*PRDLRG
Trigger: ACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAG...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTACGGAACATCTGCTCGTaGTTCCGCGTGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLRNICS*FRVLST
Trigger: GGTGCTGAGCACGCGGAAGCACGAGCAGATGTTCCG...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTCGGAACATCTGCTCGTaGTTCCGCGTGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPRNICS*FRVLST
Trigger: GGTGCTGAGCACGCGGAAGCACGAGCAGATGTTCCG...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TCCTATGGAATGGGTACCGGCGGGCGACTCTGGAGACAGAGGGGCCAGGCGGAGATCTTCCAGGAGCCGTaGCGCTTGTTGGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SYGMGTGGRLWRQRGQAEIFQEP*RLLAWF
Trigger: GAACCAGGCCAACAAGCGGCACGGCTCCTGGAAGAT...CTCCGCCTGGCCCCTCTGTCTCCAGAGTCGCCCGCCGGTACCCATTCCATAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCCGAGTAGATGGACATaGGGGTGGTCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGPSRWT*GWSAPA
Trigger: TGCTGGGGCTGACCACCCGCATGTCCATCTACTCGG...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAAGTTCATGGTCCGTaGCAGCTTGATGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPEVHGP*QLDEQV
Trigger: GACCTGCTCATCAAGCTGGCACGGACCATGAACTTC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAGAAGTTCATGGTCCGTaGCAGCTTGATGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGEVHGP*QLDEQV
Trigger: GACCTGCTCATCAAGCTGGCACGGACCATGAACTTC...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CAGGACGCCCCAGGAGAACCACATGGCCGAGGACAGGGTCAGTGCGTCCTCCTCTCACCCGCTCCTGTGTaGCGAACTTGCCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: QDAPGEPHGRGQGQCVLLSPAPV*RTCHLP
Trigger: TGGCAGATGGCAAGTTCGGCACACAGGAGCGGGTGA...GAGGAGGACGCACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGGGCGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCGAAAACTCGATGTACTaGGCGCGCTCGTTGTTTATG +
Preference number: 4 (lower is better)
Translates to: LGRWAPPGASHHGADRGIENSMY*ARSLFM
Trigger: CATAAACAACGAGCGCGCGCAGTACATCGAGTTTTC...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGTATGCCGGTACATGGTaGTCAGCTCCACCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGYAGTW*SAPPGA
Trigger: GGCGCCAGGTGGAGCTGAGCACCATGTACCGGCATA...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTTATGCCGGTACATGGTaGTCAGCTCCACCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPYAGTW*SAPPGA
Trigger: GGCGCCAGGTGGAGCTGAGCACCATGTACCGGCATA...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACCAGGTCGCACTTCTaGGAGGCCTCGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLTRSHF*EASNSS
Trigger: GCTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGT...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTCTTTGCGCATGCCTATaGCGAAGCCCGAGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPLCACL*RSPSGK
Trigger: TTTTCCGCTCGGGCTTCGGCATAGGCATGCGCAAAG...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGGCTGTCTTTGCGCATaGCTATGCCGAAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPGCLCA*LCRSPS
Trigger: GCTCGGGCTTCGGCATAGGCATGCGCAAAGACAGCC...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGCCACGATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCCCATTCCAGGGTCGCAGGGGCGTTaGTGCGCGAGTCACATTCCT +
Preference number: 4 (lower is better)
Translates to: RHDHVCLPAEQLAHHPIPGSQGR*CASHIP
Trigger: AGGAATGTGACTCGCGCAGCAACGCCCCTGCGACCC...TGGAATGGGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GGTGCTCTCCCCCTTACCGTGTCTTTGGAGGACCTACGCCTCTTGAAGCTGGAATCCTGCATGGGCCGCTaGCCAGCCTGGCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: GALPLTVSLEDLRLLKLESCMGR*PAWPAT
Trigger: AGTGGCCGGCCAGGCTGGGCAGCGGCCCATGCAGGA...TTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGGTAAGGGGGAGAGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGTGTCTTTTTGGTTTTaGAAAGCGCCGCGTCCACCC +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPVSFWF*KAPRPP
Trigger: GGGTGGACGCGGCGCTTTGCAAAACCAAAAAGACAC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGTCAGTGGGATGGTACTaGTGCAAAATAGAAATACAC +
Preference number: 4 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSSVGWY*CKIEIH
Trigger: GTGTATTTCTATTTTGCAGCAGTACCATCCCACTGA...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTCTCGGGCCCTGGGAGTaGTGGTTCTGTACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPLGPWE*WFCTRW
Trigger: CCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAG...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCTCAGTGGGATGGTACTaGGTGTCTTTGGAGGACCTA +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRSVGWY*VSLEDL
Trigger: TAGGTCCTCCAAAGACACGCAGTACCATCCCACTGA...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371553.7
CDS-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGGGGGTGGGAGTGAAGTaGTCGTTGGGGGTAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGGVGVK*SLGVGG
Trigger: TCCACCTACCCCCAACGACCACTTCACTCCCACCCC...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACTCTTGTCCGAGTAGATaGACATGCGGGTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDSCPSR*TCGWSA
Trigger: GGCTGACCACCCGCATGTCCATCTACTCGGACAAGA...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CAGGACGCCCCAGGAGAACCACATGGCCGAGGACAGGGTCAGTGCGTCCTCCTCTCTCAAACCACACGCTaGACTGGTGGGAGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: QDAPGEPHGRGQGQCVLLSQTTR*TGGSRA
Trigger: CGCCCTACTCCCACCAGTCCAGCGTGTGGTTTGAGA...GAGGAGGACGCACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGGGCGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCACGTTCTTGGTCCCTaGGTCAAACTGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPHVLGP*VKLQHL
Trigger: AAGGTGCTGCAGTTTGACCCAGGGACCAAGAACGTG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTACTGCGCGGTATACAGTaGCAGCATCGTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLLRGIQ*QHRPRW
Trigger: CCAGCGAGGACGATGCTGCCACTGTATACCGCGCAG...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCGGTCTTCCAGATGTTaGTGTTGCCCACGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGRSSRC*CCPRSP
Trigger: GGGGCTGCGTGGGCAACACCAACATCTGGAAGACCG...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGAGTCTGGTGGACATCTaGTACCCTCGAGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLSLVDI*YPRGFS
Trigger: AGAGAAGCCTCGAGGGTACCAGATGTCCACCAGACT...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGCAATCTTCAGTCTGGTaGACATCTGGTACCCTCGAG +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGQSSVW*TSGTLE
Trigger: CTCGAGGGTACCAGATGTCCACCAGACTGAAGATTG...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCTACACGAAGGGCTCCTaGTGGATCGTCACAATCTTC +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRYTKGS*WIVTIF
Trigger: GAAGATTGTGACGATCCACCAGGAGCCCTTCGTGTA...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGTACACGAAGGGCTCCTaGTGGATCGTCACAATCTTC +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGYTKGS*WIVTIF
Trigger: GAAGATTGTGACGATCCACCAGGAGCCCTTCGTGTA...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTCGCGCTCGTTGTTTATaGTTAGCGGCGCCACGATCA +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPRARCL*LAAPRS
Trigger: TGATCGTGGCGCCGCTAACCATAAACAACGAGCGCG...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTCCCAGGAGAACCACATaGCCGAGGACAGGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPPRRTT*PRTGSV
Trigger: CACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGG...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCACCCAGGAGAACCACATaGCCGAGGACAGGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAPRRTT*PRTGSV
Trigger: CACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGG...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCCTATGGAATGGGTACCGGCGGGCGACTCTGGAGACAGAGGGGCCAGGCGGAGCCATATGCCGGTACATaGTGCTCAGCTCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: SYGMGTGGRLWRQRGQAEPYAGT*CSAPPG
Trigger: GCCAGGTGGAGCTGAGCACCATGTACCGGCATATGG...CTCCGCCTGGCCCCTCTGTCTCCAGAGTCGCCCGCCGGTACCCATTCCATAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp CAGGACGCCCCAGGAGAACCACATGGCCGAGGACAGGGTCAGTGCGTCCTCCTCTGCCTTCCTATGGAATaGGTACCGGCGGGCGACTCT +
Preference number: 4 (lower is better)
Translates to: QDAPGEPHGRGQGQCVLLCLPME*VPAGDS
Trigger: AGAGTCGCCCGCCGGTACCCATTCCATAGGAAGGCA...GAGGAGGACGCACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGGGCGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GTTGGGCCCGGTGCAGATCACCTTCTTGACTGGGTCGCCGTTGACTGTGAACTCGCTCCTGGGTGGCCCTaGCTTACAGGCGTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: VGPGADHLLDWVAVDCELAPGWP*LTGVPR
Trigger: CCTCGGGACGCCTGTAAGCCAGGGCCACCCAGGAGC...GAGTTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCACCGGGCCCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp TGTCAAGGGGCTTGGGTCGGCGGAGGGCAAAATGCATCTTGGACTCACGTGCCATGCTCGTGCTGGGGCTaGGCTTGGGGGCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: CQGAWVGGGQNASWTHVPCSCWG*AWGLSA
Trigger: AGCCGAGAGCCCCCAAGCCCAGCCCCAGCACGAGCA...TGGCACGTGAGTCCAAGATGCATTTTGCCCTCCGCCGACCCAAGCCCCTTGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp TCCTCCTTGCATGTCCCATCACTCAGCGTGGGCTTGACGTACACGAAGGGCTCCCCTGCCTCCCTGTGCTaGACAGACGGGCCGACAGCG +
Preference number: 4 (lower is better)
Translates to: SSLHVPSLSVGLTYTKGSPASLC*TDGPTA
Trigger: CGCTGTCGGCCCGTCTGTCCAGCACAGGGAGGCAGG...GGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTGATGGGACATGCAAGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCAGCACTGTGTCTTTTTaGTTTTGCAAAGCGCCGCGT +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAASTVSF*FCKAPR
Trigger: ACGCGGCGCTTTGCAAAACCAAAAAGACACAGTGCT...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp TCCTCCTTGCATGTCCCATCACTCAGCGTGGGCTTGACGTACACGAAGGGCTCCCCCGCGGCGGGTCGGTaGTGTTCTCCTTCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: SSLHVPSLSVGLTYTKGSPAAGR*CSPSRG
Trigger: TCCTCGAGAAGGAGAACATCACCGACCCGCCGCGGG...GGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTGATGGGACATGCAAGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGGTCCCCATCCTCATTaGACTCCACGCGACCAGTCA +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPGPHPH*TPRDQS
Trigger: TGACTGGTCGCGTGGAGTTCAATGAGGATGGGGACC...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTGGTTCTGCAGGTTCATaGTGCTGTAGTTGGCGAACT +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSGSAGS*CCSWRT
Trigger: AGTTCGCCAACTACAGCATCATGAACCTGCAGAACC...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGTTCTGCAGGTTCATaGTGCTGTAGTTGGCGAACT +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLGSAGS*CCSWRT
Trigger: AGTTCGCCAACTACAGCATCATGAACCTGCAGAACC...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GTTAGCGGCGCCACGATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCGGTGCACCTCGTAGGTaGAGTTCATGGTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: VSGATIMSACPLSSSPIIGAPRR*SSWSVP
Trigger: TGGCACGGACCATGAACTTCACCTACGAGGTGCACC...GATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCGCCGCTAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAGGTGCACCTCGTAGGTaGAGTTCATGGTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAGAPRR*SSWSVP
Trigger: TGGCACGGACCATGAACTTCACCTACGAGGTGCACC...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTACCGCCGAGTCCCAGATaGAGGCATGCAGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLPPSPR*RHAACC
Trigger: ACAACAAGCTGCATGCCTTCATCTGGGACTCGGCGG...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACTGTCCAGGTCTTCCATaGAGCCATTCTCGTGGGACT +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDCPGLP*SHSRGT
Trigger: AGTCCCACGAGAATGGCTTCATGGAAGACCTGGACA...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GCTCAGCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTGCCTCGCGGAACATCTaGTCGTGCTTCCGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: AQLHLAPEVDIHGALLHRASRNI*SCFRVL
Trigger: GAGCACGCGGAAGCACGAGCAGATGTTCCGCGAGGC...ACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGCTGAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTATCTTCCAGGAGCCGTaGCGCTTGTTGGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPIFQEP*RLLAWF
Trigger: GAACCAGGCCAACAAGCGGCACGGCTCCTGGAAGAT...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAATCTTCCAGGAGCCGTaGCGCTTGTTGGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAIFQEP*RLLAWF
Trigger: GAACCAGGCCAACAAGCGGCACGGCTCCTGGAAGAT...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GCTCAGCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTAGTAGGGCGGCACGGTaGGCAGGAAGCTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AQLHLAPEVDIHGALLHRSRAAR*AGSSGG
Trigger: TCCACCTGAGCTTCCTGCGCACCGTGCCGCCCTACT...ACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGCTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCCTGTGTGCCGAACTTaGCATCTGCCACCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGPVCRT*HLPPGA
Trigger: TGCACCTGGTGGCAGATGGCAAGTTCGGCACACAGG...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTATCACCCGCTCCTGTGTaGCGAACTTGCCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLSPAPV*RTCHLP
Trigger: TGGCAGATGGCAAGTTCGGCACACAGGAGCGGGTGA...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGATCCACTCCTTCTTGTTaGTGTTGTTCACCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGSTPSC*CCSPAP
Trigger: AGGAGCGGGTGAACAACAGCAACAAGAAGGAGTGGA...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCGAAAACTCGATGTACTaGGCGCGCTCGTTGTTTATG +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRENSMY*ARSLFM
Trigger: CATAAACAACGAGCGCGCGCAGTACATCGAGTTTTC...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGGTGCTCTGGAACGGCTaGATGAACGAGTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGVLWNG*MNESSV
Trigger: CACGCTGGACTCGTTCATGCAGCCGTTCCAGAGCAC...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCCCATTCCACTCCTTCATCACGGCCACCACGTaGACCGACAGCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: IMSACPLSSSPIIPFHSFITATT*TDSPTS
Trigger: GCTGGTGGGGCTGTCGGTGCACGTGGTGGCCGTGAT...GAAGGAGTGGAATGGGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp CTCTGGAACGGCTGCATGAACGAGTCCAGCGTGCTCCGGGGAATCTCCTTCTTGAGCCGGCCCACACCATaGCCAGGATGCGCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LWNGCMNESSVLRGISFLSRPTP*PGCALR
Trigger: TCTCAGCGCGCATCCTGGGCATGGTGTGGGCCGGCT...CAAGAAGGAGATTCCCCGGAGCACGCTGGACTCGTTCATGCAGCCGTTCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGTCCCAGATGAAGGCATaGAGCTTGTTGTCTCTCACG +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLSQMKA*SLLSLT
Trigger: CGTGAGAGACAACAAGCTGCATGCCTTCATCTGGGA...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TTCCGCCACACGTTAACGGCGGCAAAGGCCAGCTGCATCTGCTTCCGGCGAGCAACCAGGTCGCACTTCTaGGAGGCCTCGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: FRHTLTAAKASCICFRRATRSHF*EASNSS
Trigger: GCTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGT...TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGCCGTTAACGTGTGGCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTAAGGCCAGCTGCATCTaGTTCCGGCGAGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPKASCI*FRRASL
Trigger: CAAGGATGCTCGCCGGAAGCAGATGCAGCTGGCCTT...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCTTTAGGGTCAGGCTCTaGTCTACCACTCTTTCTATC +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAFRVRL*STTLSI
Trigger: GATAGAAAGAGTGGTAGAGCAGAGCCTGACCCTAAA...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371561.8
CDS-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTTTGCCGTTGATGAGCTaGAGCCCGAGGATGCCGTCT +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPLPLMS*SPRMPS
Trigger: AGACGGCATCCTCGGGCTGCAGCTCATCAACGGCAA...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTACCGACAGAGCCATCTaGATGGCGTTGGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPTDRAI*MALGLC
Trigger: GCACAAGCCCAACGCCATCCAGATGGCTCTGTCGGT...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACCGACAGAGCCATCTaGATGGCGTTGGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLTDRAI*MALGLC
Trigger: GCACAAGCCCAACGCCATCCAGATGGCTCTGTCGGT...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGACCGACAGAGCCATCTaGATGGCGTTGGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGTDRAI*MALGLC
Trigger: GCACAAGCCCAACGCCATCCAGATGGCTCTGTCGGT...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTGGCGTAGATGGACATGCGGGTaGTCAGCCCCAGCACGGGTA +
Preference number: 4 (lower is better)
Translates to: APPGAGSRYPRSSASPWRRWTCG*SAPARV
Trigger: TACCCGTGCTGGGGCTGACCACCCGCATGTCCATCT...ACGCCACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGTCTCAAACCACACGCTaGACTGGTGGGAGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGSQTTR*TGGSRA
Trigger: CGCCCTACTCCCACCAGTCCAGCGTGTGGTTTGAGA...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTCACGTTCTTGGTCCCTaGGTCAAACTGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPHVLGP*VKLQHL
Trigger: AAGGTGCTGCAGTTTGACCCAGGGACCAAGAACGTG...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAGGGCCGTCACGTTCTTaGTCCCTGGGTCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLGPSRS*SLGQTA
Trigger: TGCAGTTTGACCCAGGGACCAAGAACGTGACGGCCC...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGGGGCCGTCACGTTCTTaGTCCCTGGGTCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGGPSRS*SLGQTA
Trigger: TGCAGTTTGACCCAGGGACCAAGAACGTGACGGCCC...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGCCACGATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCCCATTCCACGGTCTTCCAGATGTTaGTGTTGCCCACGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RHDHVCLPAEQLAHHPIPRSSRC*CCPRSP
Trigger: GGGGCTGCGTGGGCAACACCAACATCTGGAAGACCG...TGGAATGGGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCCCCATCCGCATACTTaGAAGACATCAGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPPHPHT*KTSALS
Trigger: AGAGAGTGCTGATGTCTTCCAAGTATGCGGATGGGG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCCCCATCCGCATACTTaGAAGACATCAGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLPHPHT*KTSALS
Trigger: AGAGAGTGCTGATGTCTTCCAAGTATGCGGATGGGG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCCAATCTTCAGTCTGGTaGACATCTGGTACCCTCGAG +
Preference number: 4 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPQSSVW*TSGTLE
Trigger: CTCGAGGGTACCAGATGTCCACCAGACTGAAGATTG...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCAATCTTCAGTCTGGTaGACATCTGGTACCCTCGAG +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPQSSVW*TSGTLE
Trigger: CTCGAGGGTACCAGATGTCCACCAGACTGAAGATTG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCTCACAATCTTCAGTCTaGTGGACATCTGGTACCCTC +
Preference number: 4 (lower is better)
Translates to: RARALGVLVLYKVAGRSRSQSSV*WTSGTL
Trigger: GAGGGTACCAGATGTCCACCAGACTGAAGATTGTGA...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTACGAAGGGCTCCTGGTaGATCGTCACAATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSTKGSW*IVTIFS
Trigger: ACTGAAGATTGTGACGATCCACCAGGAGCCCTTCGT...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCACGAAGGGCTCCTGGTaGATCGTCACAATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPTKGSW*IVTIFS
Trigger: ACTGAAGATTGTGACGATCCACCAGGAGCCCTTCGT...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAGATCACCTTCTTGACTaGGTCGCCGTTGACTGTGAA +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGDHLLD*VAVDCE
Trigger: TTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATC...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTGATCACCTTCTTGACTaGGTCGCCGTTGACTGTGAA +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSDHLLD*VAVDCE
Trigger: TTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATC...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCCTATGGAATGGGTACCGGCGGGCGACTCTGGAGACAGAGGGGCCAGGCGGAGCGCGCTCGTTGTTTATaGTTAGCGGCGCCACGATCA +
Preference number: 4 (lower is better)
Translates to: SYGMGTGGRLWRQRGQAERARCL*LAAPRS
Trigger: TGATCGTGGCGCCGCTAACCATAAACAACGAGCGCG...CTCCGCCTGGCCCCTCTGTCTCCAGAGTCGCCCGCCGGTACCCATTCCATAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCCATATGCCGGTACATaGTGCTCAGCTCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGPYAGT*CSAPPG
Trigger: GCCAGGTGGAGCTGAGCACCATGTACCGGCATATGG...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAATGAAGCCATTCTCGTaGGACTTGAGGATGGACAGG +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGMKPFS*DLRMDR
Trigger: CCTGTCCATCCTCAAGTCCCACGAGAATGGCTTCAT...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTATGAAGCCATTCTCGTaGGACTTGAGGATGGACAGG +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSMKPFS*DLRMDR
Trigger: CCTGTCCATCCTCAAGTCCCACGAGAATGGCTTCAT...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCTTTGCGCATGCCTATGCCGAAGCCCGAGCGGAAAAACAGCTCTCCAGTCGTCCCACCCTGTCCCAGGTaGGCCGTGGCTGCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: SLRMPMPKPERKNSSPVVPPCPR*AVAALA
Trigger: AGCAAGGGCAGCCACGGCCCACCTGGGACAGGGTGG...GACGACTGGAGAGCTGTTTTTCCGCTCGGGCTTCGGCATAGGCATGCGCAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTGGCGTGAGTCCTCTGAGGACTaGAGGAGTTGCCCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: APPGAGSRYPRSSASPWRESSED*RSCPSG
Trigger: GCCTGAGGGGCAACTCCTCCAGTCCTCAGAGGACTC...ACGCCACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp CTCTGGAACGGCTGCATGAACGAGTCCAGCGTGCTCCGGGGAATCTCCTTCTTGTCCCTGGCTCCTGGGTaGCCCTGGCTTACAGGCGTC +
Preference number: 4 (lower is better)
Translates to: LWNGCMNESSVLRGISFLSLAPG*PWLTGV
Trigger: GACGCCTGTAAGCCAGGGCCACCCAGGAGCCAGGGA...CAAGAAGGAGATTCCCCGGAGCACGCTGGACTCGTTCATGCAGCCGTTCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp AAACAGCTCTCCAGTCGTCACCAGGTCGCACTTCTGCGAGGCCTCGAACTCCAGTGGCTCCCTGGCTCCTaGGTGGCCCTGGCTTACAGG +
Preference number: 4 (lower is better)
Translates to: KQLSSRHQVALLRGLELQWLPGS*VALAYR
Trigger: CCTGTAAGCCAGGGCCACCCAGGAGCCAGGGAGCCA...CTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGTGACGACTGGAGAGCTGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGAGCACTGTGTCTTTTTaGTTTTGCAAAGCGCCGCGT +
Preference number: 4 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGSTVSF*FCKAPR
Trigger: ACGCGGCGCTTTGCAAAACCAAAAAGACACAGTGCT...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR CAA 72 bp ACGCGGGACTGGGGTGCTCTCCCCCTTACCGTGTCTTaGGAGGACCTACGCCTCTTGAAGCTGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: TRDWGALPLTVS*EDLRLLKLEAR
Trigger: CCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGGTAAGGGGGAGAGCACCCCAGTCCCGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp TCCTCCTTGCATGTCCCATCACTCAGCGTGGGCTTGACGTACACGAAGGGCTCCGCACCGCGCCAATGTTaGCGATCTTGGGGTCGCACG +
Preference number: 4 (lower is better)
Translates to: SSLHVPSLSVGLTYTKGSAPRQC*RSWGRT
Trigger: CGTGCGACCCCAAGATCGTCAACATTGGCGCGGTGC...GGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTGATGGGACATGCAAGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp CTGTCGGCTTCATCTCAGGACACAGGCTCCAGGACGGCACCCAGAGAAAGAGAATGTCTGCCTGCCCGCTaGGCAGCTCGCCCATCATCC +
Preference number: 4 (lower is better)
Translates to: LSASSQDTGSRTAPRERECLPAR*AARPSS
Trigger: GGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACA...TTCTCTTTCTCTGGGTGCCGTCCTGGAGCCTGTGTCCTGAGATGAAGCCGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCATTCTCGTGGGACTTaGGGATGGACAGGGAGACGT +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGHSRGT*GWTGRR
Trigger: ACGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATG...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCACGCGAGTCACATTCCTaGTACCGAACCCACGTCTTG +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWARESHS*YRTHVL
Trigger: CAAGACGTGGGTTCGGTATCAGGAATGTGACTCGCG...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTTGTAGGCAATCTCGATaGAAATCAGGAAGATCCCGG +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSCRQSR*KSGRSR
Trigger: CCGGGATCTTCCTGATTTTCATCGAGATTGCCTACA...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CCTACCTGCAGGTTCTTCCGCCACACGTTAACGGCGGCAAAGGCCAGCTGCATCAGAGAAGAGACGGAGTaGACCGGAACTCGACCGCGG +
Preference number: 4 (lower is better)
Translates to: PTCRFFRHTLTAAKASCIREETE*TGTRPR
Trigger: CCGCGGTCGAGTTCCGGTTCACTCCGTCTCTTCTCT...GATGCAGCTGGCCTTTGCCGCCGTTAACGTGTGGCGGAAGAACCTGCAGGTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp GGTGCTCTCCCCCTTACCGTGTCTTTGGAGGACCTACGCCTCTTGAAGCTGGAAGCAAGAGCGGGCGGATaGGAGGTGTGGAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GALPLTVSLEDLRLLKLEARAGG*EVWSLQ
Trigger: CTGGAGGCTCCACACCTCTCATCCGCCCGCTCTTGC...TTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGGTAAGGGGGAGAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp TCTGCGTGGAGGCCACTGACCCCCAAGGGGCACACACCAAGATTCAGGAAGGGGATGGCGTTGGGCTTGTaGGTGACGGAGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: SAWRPLTPKGHTPRFRKGMALGL*VTEVAL
Trigger: CAATGCCACCTCCGTCACGCACAAGCCCAACGCCAT...CCCCTTCCTGAATCTTGGTGTGTGCCCCTTGGGGGTCAGTGGCCTCCACGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGGGTGCCATTGTAGATaGCCACTTGCACCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPGCHCR*PLAPAC
Trigger: GCAAGCTGGTGCAAGTGGGCATCTACAATGGCACCC...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACTCCACTCCTTCTTGTTaGTGTTGTTCACCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDSTPSC*CCSPAP
Trigger: AGGAGCGGGTGAACAACAGCAACAAGAAGGAGTGGA...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TGTCAAGGGGCTTGGGTCGGCGGAGGGCAAAATGCATCTTGGACTCACGTGCCAACGATCATGTCTGCCTaGCCGCTGAGCAGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: CQGAWVGGGQNASWTHVPTIMSA*PLSSSP
Trigger: GGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGT...TGGCACGTGAGTCCAAGATGCATTTTGCCCTCCGCCGACCCAAGCCCCTTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGAAAACTCGATGTACTaGGCGCGCTCGTTGTTTATG +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLENSMY*ARSLFM
Trigger: CATAAACAACGAGCGCGCGCAGTACATCGAGTTTTC...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTTTGTGCTTCTCCATATaGCGGTACATGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPLCFSI*RYMVLS
Trigger: GCTGAGCACCATGTACCGGCATATGGAGAAGCACAA...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCACTTTGCGCATGCCTATaGCGAAGCCCGAGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWALCACL*RSPSGK
Trigger: TTTTCCGCTCGGGCTTCGGCATAGGCATGCGCAAAG...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTCTTTGCGCATGCCTATaGCGAAGCCCGAGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPLCACL*RSPSGK
Trigger: TTTTCCGCTCGGGCTTCGGCATAGGCATGCGCAAAG...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAGACAGGGAGACGTTCTaGTTCCAGGGGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWADRETF*FQGLSL
Trigger: CAAAGACAGCCCCTGGAAGCAGAACGTCTCCCTGTC...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TCGCTGTTCACCTTGAACCGGCCGAAGGGGCTGAAGCGGTCCAGCAGGTACAGCAAGGCCAGCTGCATCTaGTTCCGGCGAGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: SLFTLNRPKGLKRSSRYSKASCI*FRRASL
Trigger: CAAGGATGCTCGCCGGAAGCAGATGCAGCTGGCCTT...GCTGTACCTGCTGGACCGCTTCAGCCCCTTCGGCCGGTTCAAGGTGAACAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp AAACAGCTCTCCAGTCGTCACCAGGTCGCACTTCTGCGAGGCCTCGAACTCCAGGTGGCCTGCCCTACCTaGAGGTTCTTCCGCCACACG +
Preference number: 4 (lower is better)
Translates to: KQLSSRHQVALLRGLELQVACPT*RFFRHT
Trigger: CGTGTGGCGGAAGAACCTGCAGGTAGGGCAGGCCAC...CTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGTGACGACTGGAGAGCTGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp AAACAGCTCTCCAGTCGTCACCAGGTCGCACTTCTGCGAGGCCTCGAACTCCAGGGGAGCACTCACCACTaGCCCTGGCCATGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: KQLSSRHQVALLRGLELQGSTHH*PWPWLL
Trigger: TAGGAGCCATGGCCAGGGGCAGTGGTGAGTGCTCCC...CTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGTGACGACTGGAGAGCTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTGGCGTCGGCGGAGGGCAAAATaGATCTTGGACTCACGTGCC +
Preference number: 4 (lower is better)
Translates to: APPGAGSRYPRSSASPWRRRRAK*ILDSRA
Trigger: GGCACGTGAGTCCAAGATGCATTTTGCCCTCCGCCG...ACGCCACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTGGCGTGGCCGTGGCTGCCCTTaGTGGTGGCAAATTCTCATG +
Preference number: 4 (lower is better)
Translates to: APPGAGSRYPRSSASPWRGRGCP*WWQILM
Trigger: CATGAGAATTTGCCACCAGCAAGGGCAGCCACGGCC...ACGCCACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp ATTCTCGTGGGACTTGAGGATGGACAGGGAGACGTTCTGCTTCCAGGGGCTGTCGGTGGTGGCCACACCTaGCCTCGCCTGCTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: ILVGLEDGQGDVLLPGAVGGGHT*PRLLLH
Trigger: ATGCAGGAGCAGGCGAGGGCAGGTGTGGCCACCACC...GACAGCCCCTGGAAGCAGAACGTCTCCCTGTCCATCCTCAAGTCCCACGAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCTCTGCCGGAGCGCCCTaGGGCCCTGCCCAGCCGACT +
Preference number: 4 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRSAGAP*GPAQPT
Trigger: AGTCGGCTGGGCAGGGCCGCAGGGCGCTCCGGCAGA...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GCGCGCTCGTTGTTTATGGTTAGCGGCGCCACGATCATGTCTGCCTGCCCGCTGACCGACAGAGCCATCTaGATGGCGTTGGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ARSLFMVSGATIMSACPLTDRAI*MALGLC
Trigger: GCACAAGCCCAACGCCATCCAGATGGCTCTGTCGGT...CAGCGGGCAGGCAGACATGATCGTGGCGCCGCTAACCATAAACAACGAGCGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGTCTTGTCCGAGTAGATaGACATGCGGGTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGSCPSR*TCGWSA
Trigger: GGCTGACCACCCGCATGTCCATCTACTCGGACAAGA...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAGCACCTTCTCTGCCTTaGGTCCGCGCTTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLAPSLP*VRACCH
Trigger: ATGACAACAAGCGCGGACCCAAGGCAGAGAAGGTGC...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371555.8
ENST00000371560.4
CDS-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACCCCCATCCGCATACTTaGAAGACATCAGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDPHPHT*KTSALS
Trigger: AGAGAGTGCTGATGTCTTCCAAGTATGCGGATGGGG...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACTCTGGCCTCAGGTCTGATGGCCAGGTGGCCTGTGCCCGCCAGTGCTGGCAGCCAATCTTCAGTCTGGTaGACATCTGGTACCCTCGAG +
Preference number: 4 (lower is better)
Translates to: TLASGLMARWPVPASAGSQSSVW*TSGTLE
Trigger: CTCGAGGGTACCAGATGTCCACCAGACTGAAGATTG...GCTGCCAGCACTGGCGGGCACAGGCCACCTGGCCATCAGACCTGAGGCCAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCTCACAATCTTCAGTCTaGTGGACATCTGGTACCCTC +
Preference number: 4 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPSQSSV*WTSGTL
Trigger: GAGGGTACCAGATGTCCACCAGACTGAAGATTGTGA...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ACTCTGGCCTCAGGTCTGATGGCCAGGTGGCCTGTGCCCGCCAGTGCTGGCAGCACGAAGGGCTCCTGGTaGATCGTCACAATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: TLASGLMARWPVPASAGSTKGSW*IVTIFS
Trigger: ACTGAAGATTGTGACGATCCACCAGGAGCCCTTCGT...GCTGCCAGCACTGGCGGGCACAGGCCACCTGGCCATCAGACCTGAGGCCAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACGATCACCTTCTTGACTaGGTCGCCGTTGACTGTGAA +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDDHLLD*VAVDCE
Trigger: TTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATC...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGATCACCTTCTTGACTaGGTCGCCGTTGACTGTGAA +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPDHLLD*VAVDCE
Trigger: TTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATC...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGAGAATAGTCAGGCCCTaGTACTTGAAGGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLRIVRP*YLKGLE
Trigger: TTCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCT...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGAGCCACAGTGTGCTCTaGAACGGCTGCATGAACGAG +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGSHSVL*NGCMNE
Trigger: CTCGTTCATGCAGCCGTTCCAGAGCACACTGTGGCT...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp AAACAGCTCTCCAGTCGTCACCAGGTCGCACTTCTGCGAGGCCTCGAACTCCAGTTGTCTCTCACGGCCTaGATGGCCTCCGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: KQLSSRHQVALLRGLELQLSLTA*MASAAL
Trigger: GAGTGCGGCGGAGGCCATCCAGGCCGTGAGAGACAA...CTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGTGACGACTGGAGAGCTGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp AAACAGCTCTCCAGTCGTCACCAGGTCGCACTTCTGCGAGGCCTCGAACTCCAGCACTGCCCCTGGCCATaGCTCCTAGCTCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: KQLSSRHQVALLRGLELQHCPWP*LLAPVL
Trigger: CAGGACTGGAGCTAGGAGCCATGGCCAGGGGCAGTG...CTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGTGACGACTGGAGAGCTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp TTGACTGTGAACTCCTCCTTGCATGTCCCATCACTCAGCGTGGGCTTGACGTACGGCCAGGCGGAGGCTTaGAGCAGGGTGCGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LTVNSSLHVPSLSVGLTYGQAEA*SRVRGL
Trigger: GAGGCCACGCACCCTGCTCCAAGCCTCCGCCTGGCC...GTACGTCAAGCCCACGCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GGATGGCCTCCGCCGCACTCTCGTAGTTGTGCTTCTCCATATGCCGGTACATGGATCCCCCAGCAGCCCTaGCCGCACTGTCGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GWPPPHSRSCASPYAGTWIPQQP*PHCRLH
Trigger: ATGAAGCCGACAGTGCGGCCAGGGCTGCTGGGGGAT...CCATGTACCGGCATATGGAGAAGCACAACTACGAGAGTGCGGCGGAGGCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GTTGGGCCCGGTGCAGATCACCTTCTTGACTGGGTCGCCGTTGACTGTGAACTCCACCAGCTGTCTGCGTaGAGGCCACTGACCCCCAAG +
Preference number: 4 (lower is better)
Translates to: VGPGADHLLDWVAVDCELHQLSA*RPLTPK
Trigger: CTTGGGGGTCAGTGGCCTCCACGCAGACAGCTGGTG...GAGTTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCACCGGGCCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GGAAAAACAGCTCTCCAGTCGTCACCAGGTCGCACTTCTGCGAGGCCTCGAACTTTGGGGGCTCTCGGCTaGCTCTTCCTGGGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: GKTALQSSPGRTSARPRTLGALG*LFLGGP
Trigger: CGGACCTCCCAGGAAGAGCCAGCCGAGAGCCCCCAA...AGTTCGAGGCCTCGCAGAAGTGCGACCTGGTGACGACTGGAGAGCTGTTTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCGCCAGCCCCGGCGTGTaGGGTCAAGGGGCAGACGGG +
Preference number: 4 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRASPGV*GQGADG
Trigger: CCCGTCTGCCCCTTGACCCCACACGCCGGGGCTGGC...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTGTGATATCAGTGGGATaGTACTGCTGCAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSVISVG*YCCRFF
Trigger: GAAGAACCTGCAGCAGTACCATCCCACTGATATCAC...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371559.8
ENST00000371560.4
CDS-3UTR CCA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGTGATATCAGTGGGATaGTACTGCGTGTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLVISVG*YCVSLE
Trigger: CTCCAAAGACACGCAGTACCATCCCACTGATATCAC...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371553.7
3UTR CAA 72 bp CCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTaGAGCGGGCCCGTGATATCAGTGGGATGGTACTGC +
Preference number: 4 (lower is better)
Translates to: PHTTVLTEGSER*SGPVISVGWYC
Trigger: GCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACGCTGTCCGCGGTGCTaGAGCGGGGCCGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: RLSGPVISVGWYCCKIEIRCPRC*SGAGHS
Trigger: GCTGTGCCCGGCCCCGCTTCAGCACCGCGGACAGCG...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371561.8
CDS-3UTR TCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCATCAGGCCCTGGTACTTaGAGGGCTTGGAAAACTCGA +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWASGPGT*RAWKTR
Trigger: TCGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGA...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTATCAGGCCCTGGTACTTaGAGGGCTTGGAAAACTCGA +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLSGPGT*RAWKTR
Trigger: TCGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGA...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTTGTAGGCAATCTCGATaGAAATCAGGAAGATCCCGG +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPCRQSR*KSGRSR
Trigger: CCGGGATCTTCCTGATTTTCATCGAGATTGCCTACA...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp ATGAAGCCATTCTCGTGGGACTTGAGGATGGACAGGGAGACGTTCTGCTTCCAGCTGCGTGGAGGCCACTaGCCCCCAAGGGGCACACAC +
Preference number: 4 (lower is better)
Translates to: MKPFSWDLRMDRETFCFQLRGGH*PPRGTH
Trigger: GTGTGTGCCCCTTGGGGGTCAGTGGCCTCCACGCAG...CTGGAAGCAGAACGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATGGCTTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp ATGAAGCCATTCTCGTGGGACTTGAGGATGGACAGGGAGACGTTCTGCTTCCAGTCAGCAGGCGCATGGTaGTCATGGGCTCGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: MKPFSWDLRMDRETFCFQSAGAW*SWARAA
Trigger: CGCGGCCCGAGCCCATGAGCACCATGCGCCTGCTGA...CTGGAAGCAGAACGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATGGCTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp AAACAGCTCTCCAGTCGTCACCAGGTCGCACTTCTGCGAGGCCTCGAACTCCAGCCGAGTAGATGGACATaGGGGTGGTCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KQLSSRHQVALLRGLELQPSRWT*GWSAPA
Trigger: TGCTGGGGCTGACCACCCGCATGTCCATCTACTCGG...CTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGTGACGACTGGAGAGCTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp CCAGGTGGGCCGTGGCTGCCCTTGCTGGTGGCAAATTCTCATGGATACAACCTGGTTCAGCATCGCGGCTaGGCGGTATACAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGGPWLPLLVANSHGYNLVQHRG*AVYSGS
Trigger: GCTGCCACTGTATACCGCGCAGCCGCGATGCTGAAC...CAGGTTGTATCCATGAGAATTTGCCACCAGCAAGGGCAGCCACGGCCCACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAGAAGTTCATGGTCCGTaGCAGCTTGATGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAEVHGP*QLDEQV
Trigger: GACCTGCTCATCAAGCTGGCACGGACCATGAACTTC...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp ATTCTCGTGGGACTTGAGGATGGACAGGGAGACGTTCTGCTTCCAGGGGCTGTCCGAGGACAGGGTCAGTaGGTCCTCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: ILVGLEDGQGDVLLPGAVRGQGQ*VLLLLL
Trigger: GAGGAGGAGGAGGAGGACGCACTGACCCTGTCCTCG...GACAGCCCCTGGAAGCAGAACGTCTCCCTGTCCATCCTCAAGTCCCACGAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGATTTAGGGTCAGGCTCTaGTCTACCACTCTTTCTATC +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGFRVRL*STTLSI
Trigger: GATAGAAAGAGTGGTAGAGCAGAGCCTGACCCTAAA...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371561.8
CDS-3UTR GCA 90 bp TGTGCCGAACTTGCCATCTGCCACCAGGTGCACCTCGTAGGTGAAGTTCATGGTGACGCGGGACTGGGGTaGTCTCCCCCTTACCGTGTC +
Preference number: 4 (lower is better)
Translates to: CAELAICHQVHLVGEVHGDAGLG*SPPYRV
Trigger: GACACGGTAAGGGGGAGAGCACCCCAGTCCCGCGTC...ACCATGAACTTCACCTACGAGGTGCACCTGGTGGCAGATGGCAAGTTCGGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAGTGTCTTTTTGGTTTTaGAAAGCGCCGCGTCCACCC +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAVSFWF*KAPRPP
Trigger: GGGTGGACGCGGCGCTTTGCAAAACCAAAAAGACAC...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCTCAGTGGGATGGTACTaGTGCAAAATAGAAATACAC +
Preference number: 4 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAASVGWY*CKIEIH
Trigger: GTGTATTTCTATTTTGCAGCAGTACCATCCCACTGA...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGTCAGTGGGATGGTACTaGTGCAAAATAGAAATACAC +
Preference number: 4 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPSVGWY*CKIEIH
Trigger: GTGTATTTCTATTTTGCAGCAGTACCATCCCACTGA...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTTCAGTGGGATGGTACTaGTGCAAAATAGAAATACAC +
Preference number: 4 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSSVGWY*CKIEIH
Trigger: GTGTATTTCTATTTTGCAGCAGTACCATCCCACTGA...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCGGCGGCGGGAGGCGCTaGCAGCTGGGAAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRGGGRR*QLGSQG
Trigger: TCCCTGACTTCCCAGCTGGCAGCGCCTCCCGCCGCC...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCGGTGGCGCTCTCCCGTaGCCAAGGTGCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRGGALP*PRCRAG
Trigger: CCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACC...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp TCGCTGTTCACCTTGAACCGGCCGAAGGGGCTGAAGCGGTCCAGCAGGTACAGCTCTTGTCCGAGTAGATaGACATGCGGGTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SLFTLNRPKGLKRSSRYSSCPSR*TCGWSA
Trigger: GGCTGACCACCCGCATGTCCATCTACTCGGACAAGA...GCTGTACCTGCTGGACCGCTTCAGCCCCTTCGGCCGGTTCAAGGTGAACAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp CGGCACCCAGAGAAAGAGAAGAGACGGAGTGAACCGGAACTCGACCGCGGGCCAGCACCTTCTCTGCCTTaGGTCCGCGCTTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: RHPEKEKRRSEPELDRGPAPSLP*VRACCH
Trigger: ATGACAACAAGCGCGGACCCAAGGCAGAGAAGGTGC...TGGCCCGCGGTCGAGTTCCGGTTCACTCCGTCTCTTCTCTTTCTCTGGGTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCACGTTCTTGGTCCCTaGGTCAAACTGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGHVLGP*VKLQHL
Trigger: AAGGTGCTGCAGTTTGACCCAGGGACCAAGAACGTG...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GCTCAGCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTGGGCCGTCACGTTCTTaGTCCCTGGGTCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: AQLHLAPEVDIHGALLHRGPSRS*SLGQTA
Trigger: TGCAGTTTGACCCAGGGACCAAGAACGTGACGGCCC...ACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GGATGGCCTCCGCCGCACTCTCGTAGTTGTGCTTCTCCATATGCCGGTACATGGCTGCGCGGTATACAGTaGCAGCATCGTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GWPPPHSRSCASPYAGTWLRGIQ*QHRPRW
Trigger: CCAGCGAGGACGATGCTGCCACTGTATACCGCGCAG...CCATGTACCGGCATATGGAGAAGCACAACTACGAGAGTGCGGCGGAGGCCATCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GGAAAAACAGCTCTCCAGTCGTCACCAGGTCGCACTTCTGCGAGGCCTCGAACTACGGCGTCGCTGATGTaGGCCGACTCGTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: GKTALQSSPGRTSARPRTTASLM*ADSFLP
Trigger: CGGCAAGAACGAGTCGGCCCACATCAGCGACGCCGT...AGTTCGAGGCCTCGCAGAAGTGCGACCTGGTGACGACTGGAGAGCTGTTTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp CGCCACGATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCCCATTCCACTCTGTCTCTCCGCCTaGCCAGATGATCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RHDHVCLPAEQLAHHPIPLCLSA*PDDLPV
Trigger: GACAGGAAGATCATCTGGCCAGGCGGAGAGACAGAG...TGGAATGGGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAAGTCTGGTGGACATCTaGTACCCTCGAGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLSLVDI*YPRGFS
Trigger: AGAGAAGCCTCGAGGGTACCAGATGTCCACCAGACT...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTAGAATAGTCAGGCCCTaGTACTTGAAGGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPRIVRP*YLKGLE
Trigger: TTCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCT...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACAGAATAGTCAGGCCCTaGTACTTGAAGGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDRIVRP*YLKGLE
Trigger: TTCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCT...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp AACCACATGGCCGAGGACAGGGTCAGTGCGTCCTCCTCCTCCTCCTCGCTGTTCAGCCACAGTGTGCTCTaGAACGGCTGCATGAACGAG +
Preference number: 4 (lower is better)
Translates to: NHMAEDRVSASSSSSSLFSHSVL*NGCMNE
Trigger: CTCGTTCATGCAGCCGTTCCAGAGCACACTGTGGCT...GAACAGCGAGGAGGAGGAGGAGGACGCACTGACCCTGTCCTCGGCCATGTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp ATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCCCATTCCACTCCTTCCCCAGGAGAACCACATaGCCGAGGACAGGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: IMSACPLSSSPIIPFHSFPRRTT*PRTGSV
Trigger: CACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGG...GAAGGAGTGGAATGGGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GTTGGGCCCGGTGCAGATCACCTTCTTGACTGGGTCGCCGTTGACTGTGAACTCGGGTGTCAAGGGGCTTaGGTCGGCGGAGGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: VGPGADHLLDWVAVDCELGCQGA*VGGGQN
Trigger: ATTTTGCCCTCCGCCGACCCAAGCCCCTTGACACCC...GAGTTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCACCGGGCCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCCTCCGGTCCGCACCTTaGTCCAGCAGGGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRLRSAP*SSRGCP
Trigger: CGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAG...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCGGGGCAGACGGGGTGTaGGTGGGCGGTGCCGCAAGA +
Preference number: 4 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRGADGV*VGGAAR
Trigger: TCTTGCGGCACCGCCCACCCACACCCCGTCTGCCCC...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp AAACAGCTCTCCAGTCGTCACCAGGTCGCACTTCTGCGAGGCCTCGAACTCCAGGAGGTGGCATTGAGCTaGATCTTCCAGGAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: KQLSSRHQVALLRGLELQEVALS*IFQEPC
Trigger: GCACGGCTCCTGGAAGATTCAGCTCAATGCCACCTC...CTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGTGACGACTGGAGAGCTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAGGTTCTGCAGGTTCATaGTGCTGTAGTTGGCGAACT +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAGSAGS*CCSWRT
Trigger: AGTTCGCCAACTACAGCATCATGAACCTGCAGAACC...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGGGTTCTGCAGGTTCATaGTGCTGTAGTTGGCGAACT +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGGSAGS*CCSWRT
Trigger: AGTTCGCCAACTACAGCATCATGAACCTGCAGAACC...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR TCA 90 bp TCTTTGCGCATGCCTATGCCGAAGCCCGAGCGGAAAAACAGCTCTCCAGTCGTCCACTCAGCGTGGGCTTaGCGTACACGAAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SLRMPMPKPERKNSSPVVHSAWA*RTRRAP
Trigger: AGGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTG...GACGACTGGAGAGCTGTTTTTCCGCTCGGGCTTCGGCATAGGCATGCGCAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp CGGCACCCAGAGAAAGAGAAGAGACGGAGTGAACCGGAACTCGACCGCGGGCCATCAGGCCCTGGTACTTaGAGGGCTTGGAAAACTCGA +
Preference number: 4 (lower is better)
Translates to: RHPEKEKRRSEPELDRGPSGPGT*RAWKTR
Trigger: TCGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGA...TGGCCCGCGGTCGAGTTCCGGTTCACTCCGTCTCTTCTCTTTCTCTGGGTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp GGCCATGTTCTCAAAAGTAAGGGTCGCAGGGGCGTTGCTGCGCGAGTCACATTCTGTAGGAGGCCACGATaGTCATGGCAAAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: GHVLKSKGRRGVAARVTFCRRPR*SWQSRP
Trigger: GGGCCGGCTTTGCCATGATCATCGTGGCCTCCTACA...GAATGTGACTCGCGCAGCAACGCCCCTGCGACCCTTACTTTTGAGAACATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp TCGCTGTTCACCTTGAACCGGCCGAAGGGGCTGAAGCGGTCCAGCAGGTACAGCTGTCCAGGTCTTCCATaGAGCCATTCTCGTGGGACT +
Preference number: 4 (lower is better)
Translates to: SLFTLNRPKGLKRSSRYSCPGLP*SHSRGT
Trigger: AGTCCCACGAGAATGGCTTCATGGAAGACCTGGACA...GCTGTACCTGCTGGACCGCTTCAGCCCCTTCGGCCGGTTCAAGGTGAACAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp GGAAAAACAGCTCTCCAGTCGTCACCAGGTCGCACTTCTGCGAGGCCTCGAACTAGGACCTACGCCTCTTaGAGCTGGAAGCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GKTALQSSPGRTSARPRTRTYAS*SWKPGW
Trigger: CCACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCT...AGTTCGAGGCCTCGCAGAAGTGCGACCTGGTGACGACTGGAGAGCTGTTTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp TTGACTGTGAACTCCTCCTTGCATGTCCCATCACTCAGCGTGGGCTTGACGTACTCCAGATGTTGGTGTTaGCCACGCAGCCCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: LTVNSSLHVPSLSVGLTYSRCWC*PRSPAA
Trigger: CGCCGCGGGGCTGCGTGGGCAACACCAACATCTGGA...GTACGTCAAGCCCACGCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GTGATAGCCCTAAATGTGGCTTTCTTTTTAGGGTCAGGCTCTGCTCTACCACTCCCGTGTGGCGGGGGCTaGCCGGCGACGTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: VIALNVAFFLGSGSALPLPCGGG*PATCRW
Trigger: CCAACGACACGTCGCCGGGCAGCCCCCGCCACACGG...GAGTGGTAGAGCAGAGCCTGACCCTAAAAAGAAAGCCACATTTAGGGCTATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp CTCTGGAACGGCTGCATGAACGAGTCCAGCGTGCTCCGGGGAATCTCCTTCTTGGCCGAACTTGCCATCTaGCACCAGGTGCACCTCGTA +
Preference number: 4 (lower is better)
Translates to: LWNGCMNESSVLRGISFLAELAI*HQVHLV
Trigger: TACGAGGTGCACCTGGTGGCAGATGGCAAGTTCGGC...CAAGAAGGAGATTCCCCGGAGCACGCTGGACTCGTTCATGCAGCCGTTCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GTTGGGCCCGGTGCAGATCACCTTCTTGACTGGGTCGCCGTTGACTGTGAACTCCCTGTGTGCCGAACTTaGCATCTGCCACCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: VGPGADHLLDWVAVDCELPVCRT*HLPPGA
Trigger: TGCACCTGGTGGCAGATGGCAAGTTCGGCACACAGG...GAGTTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCACCGGGCCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGTTGTGCTTCTCCATATaGCGGTACATGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGLCFSI*RYMVLS
Trigger: GCTGAGCACCATGTACCGGCATATGGAGAAGCACAA...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCATCCCAGATGAAGGCATaGAGCTTGTTGTCTCTCACG +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWASQMKA*SLLSLT
Trigger: CGTGAGAGACAACAAGCTGCATGCCTTCATCTGGGA...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp AAACAGCTCTCCAGTCGTCACCAGGTCGCACTTCTGCGAGGCCTCGAACTCCAGTCGCAGGGGCGTTGCTaGGCGAGTCACATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: KQLSSRHQVALLRGLELQSQGRC*ASHIPD
Trigger: ATCAGGAATGTGACTCGCGCAGCAACGCCCCTGCGA...CTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGTGACGACTGGAGAGCTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp TGTGCCGAACTTGCCATCTGCCACCAGGTGCACCTCGTAGGTGAAGTTCATGGTCCTCGGAGGGTGGCCTaGCCTACCTGCAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: CAELAICHQVHLVGEVHGPRRVA*PTCRFF
Trigger: GAAGAACCTGCAGGTAGGGCAGGCCACCCTCCGAGG...ACCATGAACTTCACCTACGAGGTGCACCTGGTGGCAGATGGCAAGTTCGGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GAAGTTCATGGTCCGTGCCAGCTTGATGAGCAGGTCGATGCAAAAGCCGTAGCATTGGGCCCTCGCTCCTaGCTGCCTCCCTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: EVHGPCQLDEQVDAKAVALGPRS*LPPCAG
Trigger: TCCAGCACAGGGAGGCAGGCAGGAGCGAGGGCCCAA...TGCTACGGCTTTTGCATCGACCTGCTCATCAAGCTGGCACGGACCATGAACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACTTTAGGGTCAGGCTCTaGTCTACCACTCTTTCTATC +
Preference number: 4 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDFRVRL*STTLSI
Trigger: GATAGAAAGAGTGGTAGAGCAGAGCCTGACCCTAAA...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371561.8
CDS-3UTR CCA 90 bp GGCCATGTTCTCAAAAGTAAGGGTCGCAGGGGCGTTGCTGCGCGAGTCACATTCGGGGTGGGAGTGAAGTaGTCGTTGGGGGTAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GHVLKSKGRRGVAARVTFGVGVK*SLGVGG
Trigger: TCCACCTACCCCCAACGACCACTTCACTCCCACCCC...GAATGTGACTCGCGCAGCAACGCCCCTGCGACCCTTACTTTTGAGAACATGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCACCCCATCCGCATACTTaGAAGACATCAGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAPHPHT*KTSALS
Trigger: AGAGAGTGCTGATGTCTTCCAAGTATGCGGATGGGG...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTCAATCTTCAGTCTGGTaGACATCTGGTACCCTCGAG +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPQSSVW*TSGTLE
Trigger: CTCGAGGGTACCAGATGTCCACCAGACTGAAGATTG...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACGAAGGGCTCCTGGTaGATCGTCACAATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLTKGSW*IVTIFS
Trigger: ACTGAAGATTGTGACGATCCACCAGGAGCCCTTCGT...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCATACACGAAGGGCTCCTaGTGGATCGTCACAATCTTC +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAYTKGS*WIVTIF
Trigger: GAAGATTGTGACGATCCACCAGGAGCCCTTCGTGTA...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGATCACCTTCTTGACTaGGTCGCCGTTGACTGTGAA +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPDHLLD*VAVDCE
Trigger: TTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATC...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp GAAGTTCATGGTCCGTGCCAGCTTGATGAGCAGGTCGATGCAAAAGCCGTAGCACTCTCACGGCCTGGATaGCCTCCGCCGCACTCTCGT +
Preference number: 4 (lower is better)
Translates to: EVHGPCQLDEQVDAKAVALSRPG*PPPHSR
Trigger: ACGAGAGTGCGGCGGAGGCCATCCAGGCCGTGAGAG...TGCTACGGCTTTTGCATCGACCTGCTCATCAAGCTGGCACGGACCATGAACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GGTGCTCTCCCCCTTACCGTGTCTTTGGAGGACCTACGCCTCTTGAAGCTGGAAACTCACCACTGCCCCTaGCCATGGCTCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GALPLTVSLEDLRLLKLETHHCP*PWLLAP
Trigger: TGGAGCTAGGAGCCATGGCCAGGGGCAGTGGTGAGT...TTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGGTAAGGGGGAGAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp CTCTGGAACGGCTGCATGAACGAGTCCAGCGTGCTCCGGGGAATCTCCTTCTTGCTGATTGCCTTCCTATaGAATGGGTACCGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LWNGCMNESSVLRGISFLLIAFL*NGYRRA
Trigger: CGCCCGCCGGTACCCATTCCATAGGAAGGCAATCAG...CAAGAAGGAGATTCCCCGGAGCACGCTGGACTCGTTCATGCAGCCGTTCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp TGTCAAGGGGCTTGGGTCGGCGGAGGGCAAAATGCATCTTGGACTCACGTGCCACTCATGGATACAACCTaGGCACCAGGCAGGACCGGA +
Preference number: 4 (lower is better)
Translates to: CQGAWVGGGQNASWTHVPLMDTT*APGRTG
Trigger: TCCGGTCCTGCCTGGTGCCCAGGTTGTATCCATGAG...TGGCACGTGAGTCCAAGATGCATTTTGCCCTCCGCCGACCCAAGCCCCTTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTGGCGTCGTGGCTGCCCTTGCTaGTGGCAAATTCTCATGGAT +
Preference number: 4 (lower is better)
Translates to: APPGAGSRYPRSSASPWRRGCPC*WQILMD
Trigger: ATCCATGAGAATTTGCCACCAGCAAGGGCAGCCACG...ACGCCACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCCCATGGGCCCCACTGTaGCTCAGGCTGGTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRPWAPL*LRLVLR
Trigger: CCGCAGCACCAGCCTGAGCCACAGTGGGGCCCATGG...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp GTTGGGCCCGGTGCAGATCACCTTCTTGACTGGGTCGCCGTTGACTGTGAACTCCATTCTCGTGGGACTTaGGGATGGACAGGGAGACGT +
Preference number: 4 (lower is better)
Translates to: VGPGADHLLDWVAVDCELHSRGT*GWTGRR
Trigger: ACGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATG...GAGTTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCACCGGGCCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCGCTGACCGAGGGATCTaGGAGGTTGAGCGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRADRGI*EVERAR
Trigger: ACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGC...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp TGTCAAGGGGCTTGGGTCGGCGGAGGGCAAAATGCATCTTGGACTCACGTGCCAGGGTGCCATTGTAGATaGCCACTTGCACCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: CQGAWVGGGQNASWTHVPGCHCR*PLAPAC
Trigger: GCAAGCTGGTGCAAGTGGGCATCTACAATGGCACCC...TGGCACGTGAGTCCAAGATGCATTTTGCCCTCCGCCGACCCAAGCCCCTTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGGAAAACTCGATGTACTaGGCGCGCTCGTTGTTTATG +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGENSMY*ARSLFM
Trigger: CATAAACAACGAGCGCGCGCAGTACATCGAGTTTTC...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAGAAAACTCGATGTACTaGGCGCGCTCGTTGTTTATG +
Preference number: 4 (lower is better)
Translates to: RPSRAAGPISVLGRANWAENSMY*ARSLFM
Trigger: CATAAACAACGAGCGCGCGCAGTACATCGAGTTTTC...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR GCA 90 bp TCTGCGTGGAGGCCACTGACCCCCAAGGGGCACACACCAAGATTCAGGAAGGGGTTGTGCTTCTCCATATaGCGGTACATGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SAWRPLTPKGHTPRFRKGLCFSI*RYMVLS
Trigger: GCTGAGCACCATGTACCGGCATATGGAGAAGCACAA...CCCCTTCCTGAATCTTGGTGTGTGCCCCTTGGGGGTCAGTGGCCTCCACGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp CGGCCTGGATGGCCTCCGCCGCACTCTCGTAGTTGTGCTTCTCCATATGCCGGTTCCCAGATGAAGGCATaGAGCTTGTTGTCTCTCACG +
Preference number: 4 (lower is better)
Translates to: RPGWPPPHSRSCASPYAGSQMKA*SLLSLT
Trigger: CGTGAGAGACAACAAGCTGCATGCCTTCATCTGGGA...ACCGGCATATGGAGAAGCACAACTACGAGAGTGCGGCGGAGGCCATCCAGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GTTGGGCCCGGTGCAGATCACCTTCTTGACTGGGTCGCCGTTGACTGTGAACTCGCCCCTGTCTTACCCTaGCTGATTGCCTTCCTATGG +
Preference number: 4 (lower is better)
Translates to: VGPGADHLLDWVAVDCELAPVLP*LIAFLW
Trigger: CCATAGGAAGGCAATCAGGCAGGGTAAGACAGGGGC...GAGTTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCACCGGGCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp TTGACTGTGAACTCCTCCTTGCATGTCCCATCACTCAGCGTGGGCTTGACGTACCCGTTGATGAGCGTCTaGGGCGTAGCGCAGGGCGTT +
Preference number: 4 (lower is better)
Translates to: LTVNSSLHVPSLSVGLTYPLMSV*GVAQGV
Trigger: AACGCCCTGCGCTACGCCCCAGACGCTCATCAACGG...GTACGTCAAGCCCACGCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTTCACAATCTTCAGTCTaGTGGACATCTGGTACCCTC +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPSQSSV*WTSGTL
Trigger: GAGGGTACCAGATGTCCACCAGACTGAAGATTGTGA...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGTCACAATCTTCAGTCTaGTGGACATCTGGTACCCTC +
Preference number: 4 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGSQSSV*WTSGTL
Trigger: GAGGGTACCAGATGTCCACCAGACTGAAGATTGTGA...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CCA 90 bp TCGCTGTTCACCTTGAACCGGCCGAAGGGGCTGAAGCGGTCCAGCAGGTACAGCGATCACCTTCTTGACTaGGTCGCCGTTGACTGTGAA +
Preference number: 4 (lower is better)
Translates to: SLFTLNRPKGLKRSSRYSDHLLD*VAVDCE
Trigger: TTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATC...GCTGTACCTGCTGGACCGCTTCAGCCCCTTCGGCCGGTTCAAGGTGAACAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAGTGATATCAGTGGGATaGTACTGCTGCAAAATAGAA +
Preference number: 4 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGVISVG*YCCKIE
Trigger: TTCTATTTTGCAGCAGTACCATCCCACTGATATCAC...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGTGATATCAGTGGGATaGTACTGCTGCAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPVISVG*YCCRFF
Trigger: GAAGAACCTGCAGCAGTACCATCCCACTGATATCAC...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371559.8
ENST00000371560.4
3UTR CAA 72 bp ATGGACAGGGAGACGTTCTGCTTCCAGGGGCTGTCTTaGCGCATGCCTATGCCGAAGCCCGAGCGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: MDRETFCFQGLS*RMPMPKPERKN
Trigger: GTTTTTCCGCTCGGGCTTCGGCATAGGCATGCGCAAAGACAGCCCCTGGAAGCAGAACGTCTCCCTGTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CAA 72 bp CTCCCCCTTACCGTGTCTTTGGAGGACCTACGCCTCTaGAAGCTGGAAGCCAGGGTGGAGGTGATAGCCCTA +
Preference number: 4 (lower is better)
Translates to: LPLTVSLEDLRL*KLEARVEVIAL
Trigger: TAGGGCTATCACCTCCACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGGTAAGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp TTGACTGTGAACTCCTCCTTGCATGTCCCATCACTCAGCGTGGGCTTGACGTACTATGCCGGTACATGGTaGTCAGCTCCACCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: LTVNSSLHVPSLSVGLTYYAGTW*SAPPGA
Trigger: GGCGCCAGGTGGAGCTGAGCACCATGTACCGGCATA...GTACGTCAAGCCCACGCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GGAAAAACAGCTCTCCAGTCGTCACCAGGTCGCACTTCTGCGAGGCCTCGAACTCTTTGCGCATGCCTATaGCGAAGCCCGAGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: GKTALQSSPGRTSARPRTLCACL*RSPSGK
Trigger: TTTTCCGCTCGGGCTTCGGCATAGGCATGCGCAAAG...AGTTCGAGGCCTCGCAGAAGTGCGACCTGGTGACGACTGGAGAGCTGTTTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp CTGTCGGCTTCATCTCAGGACACAGGCTCCAGGACGGCACCCAGAGAAAGAGAAGACAGGGAGACGTTCTaGTTCCAGGGGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LSASSQDTGSRTAPREREDRETF*FQGLSL
Trigger: CAAAGACAGCCCCTGGAAGCAGAACGTCTCCCTGTC...TTCTCTTTCTCTGGGTGCCGTCCTGGAGCCTGTGTCCTGAGATGAAGCCGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp CGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCGGCGGCGGGAGGCGCTaGCAGCTGGGAAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: RDISGMVLLQNRNTQTRRGGGRR*QLGSQG
Trigger: TCCCTGACTTCCCAGCTGGCAGCGCCTCCCGCCGCC...GCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATAGCGTCAGCAGGCGCATaGTGCTCATGGGCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: RLSGPVISVGWYCCKIEIASAGA*CSWARA
Trigger: GGCCCGAGCCCATGAGCACCATGCGCCTGCTGACGC...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371561.8
CDS-3UTR CCA 90 bp AACCACATGGCCGAGGACAGGGTCAGTGCGTCCTCCTCCTCCTCCTCGCTGTTCTCACAATCTTCAGTCTaGTGGACATCTGGTACCCTC +
Preference number: 4 (lower is better)
Translates to: NHMAEDRVSASSSSSSLFSQSSV*WTSGTL
Trigger: GAGGGTACCAGATGTCCACCAGACTGAAGATTGTGA...GAACAGCGAGGAGGAGGAGGAGGACGCACTGACCCTGTCCTCGGCCATGTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp CTGTCGGCTTCATCTCAGGACACAGGCTCCAGGACGGCACCCAGAGAAAGAGAAGTGTCGAGGTGGAATTaGAGTGACAGAGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSASSQDTGSRTAPREREVSRWN*SDRGSS
Trigger: GGAGCTGCCTCTGTCACTCCAATTCCACCTCGACAC...TTCTCTTTCTCTGGGTGCCGTCCTGGAGCCTGTGTCCTGAGATGAAGCCGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp CGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCTCCGGTCCGCACCTTaGTCCAGCAGGGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: RDISGMVLLQNRNTQTRRLRSAP*SSRGCP
Trigger: CGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAG...GCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp CGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCGCATACACCGGGAGGTaGGGGTTGGGCGGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: RDISGMVLLQNRNTQTRRAYTGR*GLGGAR
Trigger: GCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGC...GCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR CAA 72 bp AACTCCTCCTTGCATGTCCCATCACTCAGCGTGGGCTaGACGTACACGAAGGGCTCCTGGTGGATCGTCACA +
Preference number: 4 (lower is better)
Translates to: NSSLHVPSLSVG*TYTKGSWWIVT
Trigger: TGTGACGATCCACCAGGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTGATGGGACATGCAAGGAGGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp GAAGTTCATGGTCCGTGCCAGCTTGATGAGCAGGTCGATGCAAAAGCCGTAGCAACATCAGCACTCTCTTaGAGAGCGGCCCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: EVHGPCQLDEQVDAKAVATSALS*RAARSS
Trigger: GGAAGACCGGGCCGCTCTTCAAGAGAGTGCTGATGT...TGCTACGGCTTTTGCATCGACCTGCTCATCAAGCTGGCACGGACCATGAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp ATGAAGCCATTCTCGTGGGACTTGAGGATGGACAGGGAGACGTTCTGCTTCCAGGGTCCCCATCCTCATTaGACTCCACGCGACCAGTCA +
Preference number: 4 (lower is better)
Translates to: MKPFSWDLRMDRETFCFQGPHPH*TPRDQS
Trigger: TGACTGGTCGCGTGGAGTTCAATGAGGATGGGGACC...CTGGAAGCAGAACGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATGGCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp TCCTCCTTGCATGTCCCATCACTCAGCGTGGGCTTGACGTACACGAAGGGCTCCGGTTCTGCAGGTTCATaGTGCTGTAGTTGGCGAACT +
Preference number: 4 (lower is better)
Translates to: SSLHVPSLSVGLTYTKGSGSAGS*CCSWRT
Trigger: AGTTCGCCAACTACAGCATCATGAACCTGCAGAACC...GGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTGATGGGACATGCAAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCAGGACCTACGCCTCTTaGAGCTGGAAGCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRRTYAS*SWKPGW
Trigger: CCACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCT...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371546.8
ENST00000371561.8
CDS-3UTR TCA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATAGGTGCAGGGCAGGGTTaGAGACAGTCCCGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RLSGPVISVGWYCCKIEIGAGQG*RQSRAS
Trigger: GCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACC...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp GGGAATCTCCTTCTTGACCAGAATAGTCAGGCCCTGGTACTTGAAGGGCTTGGACGGAACATCTGCTCGTaGTTCCGCGTGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: GNLLLDQNSQALVLEGLGRNICS*FRVLST
Trigger: GGTGCTGAGCACGCGGAAGCACGAGCAGATGTTCCG...TCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCTGGTCAAGAAGGAGATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATATTCTCGAGGAGCTCGTaGACGGCCTGGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: RLSGPVISVGWYCCKIEIFSRSS*TAWATT
Trigger: CGTGGTGGCCCAGGCCGTGCACGAGCTCCTCGAGAA...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp TTCCGCCACACGTTAACGGCGGCAAAGGCCAGCTGCATCTGCTTCCGGCGAGCATTTAGGGTCAGGCTCTaGTCTACCACTCTTTCTATC +
Preference number: 4 (lower is better)
Translates to: FRHTLTAAKASCICFRRAFRVRL*STTLSI
Trigger: GATAGAAAGAGTGGTAGAGCAGAGCCTGACCCTAAA...TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGCCGTTAACGTGTGGCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCAGATGGACATGCGGGTaGTCAGCCCCAGCACGGGTA +
Preference number: 4 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRRWTCG*SAPARV
Trigger: TACCCGTGCTGGGGCTGACCACCCGCATGTCCATCT...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp TCTTTGCGCATGCCTATGCCGAAGCCCGAGCGGAAAAACAGCTCTCCAGTCGTCCACGTTCTTGGTCCCTaGGTCAAACTGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: SLRMPMPKPERKNSSPVVHVLGP*VKLQHL
Trigger: AAGGTGCTGCAGTTTGACCCAGGGACCAAGAACGTG...GACGACTGGAGAGCTGTTTTTCCGCTCGGGCTTCGGCATAGGCATGCGCAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GGATGGCCTCCGCCGCACTCTCGTAGTTGTGCTTCTCCATATGCCGGTACATGGCCCCATCCGCATACTTaGAAGACATCAGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: GWPPPHSRSCASPYAGTWPHPHT*KTSALS
Trigger: AGAGAGTGCTGATGTCTTCCAAGTATGCGGATGGGG...CCATGTACCGGCATATGGAGAAGCACAACTACGAGAGTGCGGCGGAGGCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp AAACAGCTCTCCAGTCGTCACCAGGTCGCACTTCTGCGAGGCCTCGAACTCCAGATGAAGCCATTCTCGTaGGACTTGAGGATGGACAGG +
Preference number: 4 (lower is better)
Translates to: KQLSSRHQVALLRGLELQMKPFS*DLRMDR
Trigger: CCTGTCCATCCTCAAGTCCCACGAGAATGGCTTCAT...CTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGTGACGACTGGAGAGCTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp TGTCAAGGGGCTTGGGTCGGCGGAGGGCAAAATGCATCTTGGACTCACGTGCCAGGTGGCAAATTCTCATaGATACAACCTGGGCACCAG +
Preference number: 4 (lower is better)
Translates to: CQGAWVGGGQNASWTHVPGGKFS*IQPGHQ
Trigger: CTGGTGCCCAGGTTGTATCCATGAGAATTTGCCACC...TGGCACGTGAGTCCAAGATGCATTTTGCCCTCCGCCGACCCAAGCCCCTTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACAGACGGGGTGTGGGTaGGCGGTGCCGCAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RLSGPVISVGWYCCKIEIQTGCG*AVPQEE
Trigger: CTCTTCTTGCGGCACCGCCCACCCACACCCCGTCTG...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR CAA 72 bp TTCTTGACTGGGTCGCCGTTGACTGTGAACTCCTCCTaGCATGTCCCATCACTCAGCGTGGGCTTGACGTAC +
Preference number: 4 (lower is better)
Translates to: FLTGSPLTVNSS*HVPSLSVGLTY
Trigger: GTACGTCAAGCCCACGCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGTCAACGGCGACCCAGTCAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCGGTGCACCTCGTAGGTaGAGTTCATGGTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRGAPRR*SSWSVP
Trigger: TGGCACGGACCATGAACTTCACCTACGAGGTGCACC...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp GATCGTCACAATCTTCAGTCTGGTGGACATCTGGTACCCTCGAGGCTTCTCTGTCCGCCGAGTCCCAGATaGAGGCATGCAGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: DRHNLQSGGHLVPSRLLCPPSPR*RHAACC
Trigger: ACAACAAGCTGCATGCCTTCATCTGGGACTCGGCGG...ACAGAGAAGCCTCGAGGGTACCAGATGTCCACCAGACTGAAGATTGTGACGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp TGTCAAGGGGCTTGGGTCGGCGGAGGGCAAAATGCATCTTGGACTCACGTGCCATGTAGGCAATCTCGATaGAAATCAGGAAGATCCCGG +
Preference number: 4 (lower is better)
Translates to: CQGAWVGGGQNASWTHVPCRQSR*KSGRSR
Trigger: CCGGGATCTTCCTGATTTTCATCGAGATTGCCTACA...TGGCACGTGAGTCCAAGATGCATTTTGCCCTCCGCCGACCCAAGCCCCTTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATAGCTCGTGCTTCCGCGTaGTCAGCACCGCGCCAATGT +
Preference number: 4 (lower is better)
Translates to: RLSGPVISVGWYCCKIEIARASA*SAPRQC
Trigger: ACATTGGCGCGGTGCTGAGCACGCGGAAGCACGAGC...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp GATCGTCACAATCTTCAGTCTGGTGGACATCTGGTACCCTCGAGGCTTCTCTGTGTGCTCTGGAACGGCTaGATGAACGAGTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: DRHNLQSGGHLVPSRLLCVLWNG*MNESSV
Trigger: CACGCTGGACTCGTTCATGCAGCCGTTCCAGAGCAC...ACAGAGAAGCCTCGAGGGTACCAGATGTCCACCAGACTGAAGATTGTGACGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCGTGCTCTGGAACGGCTaGATGAACGAGTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRVLWNG*MNESSV
Trigger: CACGCTGGACTCGTTCATGCAGCCGTTCCAGAGCAC...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATAGCGGCAAAGGCCAGCTaGATCTGCTTCCGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: RLSGPVISVGWYCCKIEIAAKAS*ICFRRA
Trigger: TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGC...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp CGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCGGGAAGGATGGGGCTaGCGTCTCTGCTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: RDISGMVLLQNRNTQTRRREGWG*RLCSKP
Trigger: GGGCTTGGAGCAGAGACGGCAGCCCCATCCTTCCCG...GCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCACCGACAGAGCCATCTaGATGGCGTTGGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRTDRAI*MALGLC
Trigger: GCACAAGCCCAACGCCATCCAGATGGCTCTGTCGGT...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCGGGCCGTCACGTTCTTaGTCCCTGGGTCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRGPSRS*SLGQTA
Trigger: TGCAGTTTGACCCAGGGACCAAGAACGTGACGGCCC...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GGCCATGTTCTCAAAAGTAAGGGTCGCAGGGGCGTTGCTGCGCGAGTCACATTCTACACGAAGGGCTCCTaGTGGATCGTCACAATCTTC +
Preference number: 4 (lower is better)
Translates to: GHVLKSKGRRGVAARVTFYTKGS*WIVTIF
Trigger: GAAGATTGTGACGATCCACCAGGAGCCCTTCGTGTA...GAATGTGACTCGCGCAGCAACGCCCCTGCGACCCTTACTTTTGAGAACATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp GAAGTTCATGGTCCGTGCCAGCTTGATGAGCAGGTCGATGCAAAAGCCGTAGCAAGGCAGGTGTCGAGGTaGAATTGGAGTGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: EVHGPCQLDEQVDAKAVARQVSR*NWSDRG
Trigger: GCCTCTGTCACTCCAATTCCACCTCGACACCTGCCT...TGCTACGGCTTTTGCATCGACCTGCTCATCAAGCTGGCACGGACCATGAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp GGGAATCTCCTTCTTGACCAGAATAGTCAGGCCCTGGTACTTGAAGGGCTTGGACGCGAGTCACATTCCTaGTACCGAACCCACGTCTTG +
Preference number: 4 (lower is better)
Translates to: GNLLLDQNSQALVLEGLGRESHS*YRTHVL
Trigger: CAAGACGTGGGTTCGGTATCAGGAATGTGACTCGCG...TCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCTGGTCAAGAAGGAGATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp GGCCATGTTCTCAAAAGTAAGGGTCGCAGGGGCGTTGCTGCGCGAGTCACATTCCTTACCCTGCCTGATTaGCTTCCTATGGAATGGGTA +
Preference number: 4 (lower is better)
Translates to: GHVLKSKGRRGVAARVTFLTLPD*LPMEWV
Trigger: TACCCATTCCATAGGAAGGCAATCAGGCAGGGTAAG...GAATGTGACTCGCGCAGCAACGCCCCTGCGACCCTTACTTTTGAGAACATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATAAGATGGACATGCGGGTaGTCAGCCCCAGCACGGGTA +
Preference number: 4 (lower is better)
Translates to: RLSGPVISVGWYCCKIEIRWTCG*SAPARV
Trigger: TACCCGTGCTGGGGCTGACCACCCGCATGTCCATCT...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GGCCATGTTCTCAAAAGTAAGGGTCGCAGGGGCGTTGCTGCGCGAGTCACATTCAGAATAGTCAGGCCCTaGTACTTGAAGGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GHVLKSKGRRGVAARVTFRIVRP*YLKGLE
Trigger: TTCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCT...GAATGTGACTCGCGCAGCAACGCCCCTGCGACCCTTACTTTTGAGAACATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CAA 72 bp ATTAGGGATGACGTGGGTGCCATTGTAGATGCCCACTaGCACCAGCTTGCGGTTCTGCAGGTTCATGATGCT +
Preference number: 4 (lower is better)
Translates to: IRDDVGAIVDAH*HQLAVLQVHDA
Trigger: AGCATCATGAACCTGCAGAACCGCAAGCTGGTGCAAGTGGGCATCTACAATGGCACCCACGTCATCCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
3UTR CAA 72 bp ATCTCCTTCTTGACCAGAATAGTCAGGCCCTGGTACTaGAAGGGCTTGGAAAACTCGATGTACTGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: ISFLTRIVRPWY*KGLENSMYCAR
Trigger: GCGCGCGCAGTACATCGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCTGGTCAAGAAGGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp CGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCTGTAGGAGGCCACGATaGTCATGGCAAAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: RDISGMVLLQNRNTQTRRCRRPR*SWQSRP
Trigger: GGGCCGGCTTTGCCATGATCATCGTGGCCTCCTACA...GCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR TCA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCTGTCCAGGTCTTCCATaGAGCCATTCTCGTGGGACT +
Preference number: 4 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRCPGLP*SHSRGT
Trigger: AGTCCCACGAGAATGGCTTCATGGAAGACCTGGACA...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp GATCGTCACAATCTTCAGTCTGGTGGACATCTGGTACCCTCGAGGCTTCTCTGTGAAGTTCATGGTCCGTaGCAGCTTGATGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: DRHNLQSGGHLVPSRLLCEVHGP*QLDEQV
Trigger: GACCTGCTCATCAAGCTGGCACGGACCATGAACTTC...ACAGAGAAGCCTCGAGGGTACCAGATGTCCACCAGACTGAAGATTGTGACGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATATCACCCGCTCCTGTGTaGCGAACTTGCCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: RLSGPVISVGWYCCKIEISPAPV*RTCHLP
Trigger: TGGCAGATGGCAAGTTCGGCACACAGGAGCGGGTGA...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GTGATAGCCCTAAATGTGGCTTTCTTTTTAGGGTCAGGCTCTGCTCTACCACTCATTAGATGGCTAGGGTaGTGGCCACACCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: VIALNVAFFLGSGSALPLIRWLG*WPHLPS
Trigger: CGAGGGCAGGTGTGGCCACCACCCTAGCCATCTAAT...GAGTGGTAGAGCAGAGCCTGACCCTAAAAAGAAAGCCACATTTAGGGCTATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACATTCTCGTGGGACTTaGGGATGGACAGGGAGACGT +
Preference number: 4 (lower is better)
Translates to: RLSGPVISVGWYCCKIEIHSRGT*GWTGRR
Trigger: ACGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATG...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp CGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCATCTTCCAGGAGCCGTaGCGCTTGTTGGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: RDISGMVLLQNRNTQTRRIFQEP*RLLAWF
Trigger: GAACCAGGCCAACAAGCGGCACGGCTCCTGGAAGAT...GCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATAGGGTGCCATTGTAGATaGCCACTTGCACCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: RLSGPVISVGWYCCKIEIGCHCR*PLAPAC
Trigger: GCAAGCTGGTGCAAGTGGGCATCTACAATGGCACCC...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATATTTAGGCATCACCACTaGATACACCGGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RLSGPVISVGWYCCKIEIFRHHH*IHREVG
Trigger: CCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATATCTTGTCCGAGTAGATaGACATGCGGGTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: RLSGPVISVGWYCCKIEISCPSR*TCGWSA
Trigger: GGCTGACCACCCGCATGTCCATCTACTCGGACAAGA...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp CGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCGGGCCGTCACGTTCTTaGTCCCTGGGTCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: RDISGMVLLQNRNTQTRRGPSRS*SLGQTA
Trigger: TGCAGTTTGACCCAGGGACCAAGAACGTGACGGCCC...GCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCCCCCATCCGCATACTTaGAAGACATCAGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRPHPHT*KTSALS
Trigger: AGAGAGTGCTGATGTCTTCCAAGTATGCGGATGGGG...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACTCTGTCTCTCCGCCTaGCCAGATGATCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RLSGPVISVGWYCCKIEILCLSA*PDDLPV
Trigger: GACAGGAAGATCATCTGGCCAGGCGGAGAGACAGAG...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
3UTR CAA 72 bp TTGACCAGAATAGTCAGGCCCTGGTACTTGAAGGGCTaGGAAAACTCGATGTACTGCGCGCGCTCGTTGTTT +
Preference number: 4 (lower is better)
Translates to: LTRIVRPWYLKG*ENSMYCARSLF
Trigger: AAACAACGAGCGCGCGCAGTACATCGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCTGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CCA 90 bp CGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCTCTGTCTCTCCGCCTaGCCAGATGATCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RDISGMVLLQNRNTQTRRLCLSA*PDDLPV
Trigger: GACAGGAAGATCATCTGGCCAGGCGGAGAGACAGAG...GCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp GGGAATCTCCTTCTTGACCAGAATAGTCAGGCCCTGGTACTTGAAGGGCTTGGAGGGCAAAATGCATCTTaGACTCACGTGCCATACACA +
Preference number: 4 (lower is better)
Translates to: GNLLLDQNSQALVLEGLGGQNAS*THVPYT
Trigger: TGTGTATGGCACGTGAGTCCAAGATGCATTTTGCCC...TCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCTGGTCAAGAAGGAGATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR TCA 90 bp CGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCTGTCCAGGTCTTCCATaGAGCCATTCTCGTGGGACT +
Preference number: 4 (lower is better)
Translates to: RDISGMVLLQNRNTQTRRCPGLP*SHSRGT
Trigger: AGTCCCACGAGAATGGCTTCATGGAAGACCTGGACA...GCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATATTGTGCTTCTCCATATaGCGGTACATGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RLSGPVISVGWYCCKIEILCFSI*RYMVLS
Trigger: GCTGAGCACCATGTACCGGCATATGGAGAAGCACAA...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR GCA 90 bp GTGATAGCCCTAAATGTGGCTTTCTTTTTAGGGTCAGGCTCTGCTCTACCACTCGAAAACTCGATGTACTaGGCGCGCTCGTTGTTTATG +
Preference number: 4 (lower is better)
Translates to: VIALNVAFFLGSGSALPLENSMY*ARSLFM
Trigger: CATAAACAACGAGCGCGCGCAGTACATCGAGTTTTC...GAGTGGTAGAGCAGAGCCTGACCCTAAAAAGAAAGCCACATTTAGGGCTATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR GCA 90 bp CGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCTTGTGCTTCTCCATATaGCGGTACATGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RDISGMVLLQNRNTQTRRLCFSI*RYMVLS
Trigger: GCTGAGCACCATGTACCGGCATATGGAGAAGCACAA...GCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp CGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCGATCACCTTCTTGACTaGGTCGCCGTTGACTGTGAA +
Preference number: 4 (lower is better)
Translates to: RDISGMVLLQNRNTQTRRDHLLD*VAVDCE
Trigger: TTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATC...GCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATAAGCACTGTGTCTTTTTaGTTTTGCAAAGCGCCGCGT +
Preference number: 4 (lower is better)
Translates to: RLSGPVISVGWYCCKIEISTVSF*FCKAPR
Trigger: ACGCGGCGCTTTGCAAAACCAAAAAGACACAGTGCT...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCGTGATATCAGTGGGATaGTACTGCTGCAAAATAGAA +
Preference number: 4 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRVISVG*YCCKIE
Trigger: TTCTATTTTGCAGCAGTACCATCCCACTGATATCAC...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CCA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATAGTGATATCAGTGGGATaGTACTGCTGCAAAATAGAA +
Preference number: 4 (lower is better)
Translates to: RLSGPVISVGWYCCKIEIVISVG*YCCKIE
Trigger: TTCTATTTTGCAGCAGTACCATCCCACTGATATCAC...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS CCA 90 bp GAGCGTCAGCAGGCGCATGGTGCTCATGGGCTCGGGCCGCGGGCCTaGCTCTGCGCGGCGCGAACGCGGGGCCCTCGGCGCATCCCCCGC +
Preference number: 5 (lower is better)
Translates to: ERQQAHGAHGLGPRA*LCAARTRGPRRIPR
Trigger: GCGGGGGATGCGCCGAGGGCCCCGCGTTCGCGCCGCGCAGAGCCAGGCCCGCGGCCCGAGCCCATGAGCACCATGCGCCTGCTGACGCTC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350902.9
ENST00000371561.8
ENST00000471122.5
CDS CCA 90 bp CGTTCTGGGCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCGGGGTaGGCGGGCGGACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: RSGLGPAGAARQAAG*AGGRTGGPGWAVSG
Trigger: CCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTCCGCCCGCCCACCCCGCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGCCCAGAACG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462584.1
CDS-3UTR CAA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGCCCGGCGACGTGTCGTaGGGCCCGGTGCAGATCACC +
Preference number: 5 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSPGDVS*GPVQIT
Trigger: GGTGATCTGCACCGGGCCCAACGACACGTCGCCGGG...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCACCGGGAGGTGGGGGTaGGGCGGTGCGCGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSTGRWG*GGARLH
Trigger: GTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGT...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGACCGGGAGGTGGGGGTaGGGCGGTGCGCGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARTGRWG*GGARLH
Trigger: GTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGT...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCGCTCCGGTCCGCACCTaGGTCCAGCAGGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSAPVRT*VQQGLP
Trigger: GGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGC...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGACCGGGAGGTGGGGGTaGGGCGGTGCGCGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRTGRWG*GGARLH
Trigger: GTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGT...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGCAGGAGCCGTGCCGCTaGTTGGCCTGGTTCACGGCC +
Preference number: 5 (lower is better)
Translates to: EGLSPLESGGGGPRRREAQEPCR*LAWFTA
Trigger: GGCCGTGAACCAGGCCAACAAGCGGCACGGCTCCTG...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGTCCCCGATGCCGGAGTaGAGCAGGACGCCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: EGLSPLESGGGGPRRREASPMPE*SRTPQE
Trigger: CTCCTGGGGCGTCCTGCTCAACTCCGGCATCGGGGA...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCGCTCCGGTCCGCACCTaGGTCCAGCAGGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAAPVRT*VQQGLP
Trigger: GGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGC...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCGGGAGGTGGGGGTaGGGCGGTGCGCGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: RARALGVLVLYKVAGRSRTGRWG*GGARLH
Trigger: GTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGT...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGTTCCAGATGTTGGTGTaGCCCACGCAGCCCCGCGGC +
Preference number: 5 (lower is better)
Translates to: EGLSPLESGGGGPRRREAFQMLV*PTQPRG
Trigger: GCCGCGGGGCTGCGTGGGCAACACCAACATCTGGAA...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCCCCGGCGACGTGTCGTaGGGCCCGGTGCAGATCACC +
Preference number: 5 (lower is better)
Translates to: LGRWAPPGASHHGADRGIPGDVS*GPVQIT
Trigger: GGTGATCTGCACCGGGCCCAACGACACGTCGCCGGG...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGCCCGGCGACGTGTCGTaGGGCCCGGTGCAGATCACC +
Preference number: 5 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQPGDVS*GPVQIT
Trigger: GGTGATCTGCACCGGGCCCAACGACACGTCGCCGGG...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCACCGGGAGGTGGGGGTaGGGCGGTGCGCGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPTGRWG*GGARLH
Trigger: GTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGT...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS GCA 90 bp CAGCCCCGCGGCGGGTCGGTGATGTTCTCCTTCTCGAGGAGCTCGTaGACGGCCTGGGCCACCACGCCCACGGCGTCGCTGATGTGGGCC +
Preference number: 5 (lower is better)
Translates to: QPRGGSVMFSFSRSS*TAWATTPTASLMWA
Trigger: GGCCCACATCAGCGACGCCGTGGGCGTGGTGGCCCAGGCCGTGCACGAGCTCCTCGAGAAGGAGAACATCACCGACCCGCCGCGGGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675295.1
ENST00000676396.1
CDS-3UTR CAA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGAGCCGTGCCGCTTGTaGGCCTGGTTCACGGCCTCG +
Preference number: 5 (lower is better)
Translates to: TDGRPRVGSLWGGWASLREPCRL*AWFTAS
Trigger: CGAGGCCGTGAACCAGGCCAACAAGCGGCACGGCTC...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGAGCCGTGCCGCTTGTaGGCCTGGTTCACGGCCTCG +
Preference number: 5 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQEPCRL*AWFTAS
Trigger: CGAGGCCGTGAACCAGGCCAACAAGCGGCACGGCTC...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGGAGCCGTGCCGCTTGTaGGCCTGGTTCACGGCCTCG +
Preference number: 5 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPEPCRL*AWFTAS
Trigger: CGAGGCCGTGAACCAGGCCAACAAGCGGCACGGCTC...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCCAGGAGCCGTGCCGCTaGTTGGCCTGGTTCACGGCC +
Preference number: 5 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPQEPCR*LAWFTA
Trigger: GGCCGTGAACCAGGCCAACAAGCGGCACGGCTCCTG...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCTCCCCGATGCCGGAGTaGAGCAGGACGCCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAASPMPE*SRTPQE
Trigger: CTCCTGGGGCGTCCTGCTCAACTCCGGCATCGGGGA...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGTCCCCGATGCCGGAGTaGAGCAGGACGCCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPSPMPE*SRTPQE
Trigger: CTCCTGGGGCGTCCTGCTCAACTCCGGCATCGGGGA...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCAGGGTCGCAGGGGCGTaGCTGCGCGAGTCACATTCC +
Preference number: 5 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGRVAGA*LRESHS
Trigger: GGAATGTGACTCGCGCAGCAACGCCCCTGCGACCCT...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGAGGGTCGCAGGGGCGTaGCTGCGCGAGTCACATTCC +
Preference number: 5 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWRVAGA*LRESHS
Trigger: GGAATGTGACTCGCGCAGCAACGCCCCTGCGACCCT...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCCAATGTTGACGATCTaGGGGTCGCACGCGGCACGG +
Preference number: 5 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARPMLTI*GSHAAR
Trigger: CCGTGCCGCGTGCGACCCCAAGATCGTCAACATTGG...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGTGGATGGCGTTGGGCTaGTGCGTGACGGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWWMALG*CVTEVA
Trigger: TGCCACCTCCGTCACGCACAAGCCCAACGCCATCCA...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCTGGATGGCGTTGGGCTaGTGCGTGACGGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGWMALG*CVTEVA
Trigger: TGCCACCTCCGTCACGCACAAGCCCAACGCCATCCA...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGGCCATCTGGATGGCGTaGGGCTTGTGCGTGACGGAG +
Preference number: 5 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARAIWMA*GLCVTE
Trigger: CTCCGTCACGCACAAGCCCAACGCCATCCAGATGGC...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCGCCATCTGGATGGCGTaGGGCTTGTGCGTGACGGAG +
Preference number: 5 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSAIWMA*GLCVTE
Trigger: CTCCGTCACGCACAAGCCCAACGCCATCCAGATGGC...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGAGGGCCGTCACGTTCTaGGTCCCTGGGTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: EGLSPLESGGGGPRRREARAVTF*VPGSNC
Trigger: GCAGTTTGACCCAGGGACCAAGAACGTGACGGCCCT...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGTTCCAGATGTTGGTGTaGCCCACGCAGCCCCGCGGC +
Preference number: 5 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRFQMLV*PTQPRG
Trigger: GCCGCGGGGCTGCGTGGGCAACACCAACATCTGGAA...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCTTCCAGATGTTGGTGTaGCCCACGCAGCCCCGCGGC +
Preference number: 5 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAFQMLV*PTQPRG
Trigger: GCCGCGGGGCTGCGTGGGCAACACCAACATCTGGAA...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGTTCCAGATGTTGGTGTaGCCCACGCAGCCCCGCGGC +
Preference number: 5 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQFQMLV*PTQPRG
Trigger: GCCGCGGGGCTGCGTGGGCAACACCAACATCTGGAA...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGCCGGTCTTCCAGATGTaGGTGTTGCCCACGCAGCCC +
Preference number: 5 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWPVFQM*VLPTQP
Trigger: GGGCTGCGTGGGCAACACCAACATCTGGAAGACCGG...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGCGGTCCCCATCCTCATaGAACTCCACGCGACCAGTC +
Preference number: 5 (lower is better)
Translates to: EGLSPLESGGGGPRRREARSPSS*NSTRPV
Trigger: GACTGGTCGCGTGGAGTTCAATGAGGATGGGGACCG...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGCCCACTTGCACCAGCTaGCGGTTCTGCAGGTTCATG +
Preference number: 5 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSPTCTS*RFCRFM
Trigger: CATGAACCTGCAGAACCGCAAGCTGGTGCAAGTGGG...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCCCGGCGACGTGTCGTaGGGCCCGGTGCAGATCACC +
Preference number: 5 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPPGDVS*GPVQIT
Trigger: GGTGATCTGCACCGGGCCCAACGACACGTCGCCGGG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGTCCCCGATGCCGGAGTaGAGCAGGACGCCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGSPMPE*SRTPQE
Trigger: CTCCTGGGGCGTCCTGCTCAACTCCGGCATCGGGGA...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCCTCAGCCGAGGGTCGTaGATGCCCGTGATGCGCTCC +
Preference number: 5 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPLSRGS*MPVMRS
Trigger: GGAGCGCATCACGGGCATCAACGACCCTCGGCTGAG...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGCTCAGCCGAGGGTCGTaGATGCCCGTGATGCGCTCC +
Preference number: 5 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPLSRGS*MPVMRS
Trigger: GGAGCGCATCACGGGCATCAACGACCCTCGGCTGAG...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGTTCCAGGGGCTGTCTTaGCGCATGCCTATGCCGAAG +
Preference number: 5 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSFQGLS*RMPMPK
Trigger: CTTCGGCATAGGCATGCGCAAAGACAGCCCCTGGAA...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGAGGGTCGCAGGGGCGTaGCTGCGCGAGTCACATTCC +
Preference number: 5 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRRVAGA*LRESHS
Trigger: GGAATGTGACTCGCGCAGCAACGCCCCTGCGACCCT...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGAGGGTCGCAGGGGCGTaGCTGCGCGAGTCACATTCC +
Preference number: 5 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPRVAGA*LRESHS
Trigger: GGAATGTGACTCGCGCAGCAACGCCCCTGCGACCCT...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGGACTCGTTCTTGCCGTaGATGAGCTGCAGCCCGAGG +
Preference number: 5 (lower is better)
Translates to: EGLSPLESGGGGPRRREADSFLP*MSCSPR
Trigger: CCTCGGGCTGCAGCTCATCAACGGCAAGAACGAGTC...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS GCA 90 bp CCCCATCCCCTCCTAGAGCGAAGCCTGCAGACCTCGCAGAGGCGCTaGGGCCCAGAACCCAGGAGCCTCCCAGGCCTCCGTTGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: PHPLLERSLQTSQRR*GPEPRSLPGLRCWL
Trigger: GAGCCAGCAACGGAGGCCTGGGAGGCTCCTGGGTTCTGGGCCGCAGCGCCTCTGCGAGGTCTGCAGGCTTCGCTCTAGGAGGGGATGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS-3UTR CAA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCCAATGTTGACGATCTaGGGGTCGCACGCGGCACGG +
Preference number: 5 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAPMLTI*GSHAAR
Trigger: CCGTGCCGCGTGCGACCCCAAGATCGTCAACATTGG...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGAGCCGTGCCGCTTGTaGGCCTGGTTCACGGCCTCG +
Preference number: 5 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLEPCRL*AWFTAS
Trigger: CGAGGCCGTGAACCAGGCCAACAAGCGGCACGGCTC...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCAGGAGCCGTGCCGCTaGTTGGCCTGGTTCACGGCC +
Preference number: 5 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSQEPCR*LAWFTA
Trigger: GGCCGTGAACCAGGCCAACAAGCGGCACGGCTCCTG...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCTGGATGGCGTTGGGCTaGTGCGTGACGGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAWMALG*CVTEVA
Trigger: TGCCACCTCCGTCACGCACAAGCCCAACGCCATCCA...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCAGGGCCGTCACGTTCTaGGTCCCTGGGTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGRAVTF*VPGSNC
Trigger: GCAGTTTGACCCAGGGACCAAGAACGTGACGGCCCT...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGGACATCAGCACTCTCTaGAAGAGCGGCCCGGTCTTC +
Preference number: 5 (lower is better)
Translates to: EGLSPLESGGGGPRRREADISTL*KSGPVF
Trigger: GAAGACCGGGCCGCTCTTCAAGAGAGTGCTGATGTC...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCGGTCCCCATCCTCATaGAACTCCACGCGACCAGTC +
Preference number: 5 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARRSPSS*NSTRPV
Trigger: GACTGGTCGCGTGGAGTTCAATGAGGATGGGGACCG...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGATGGTCCGTGCCAGCTaGATGAGCAGGTCGATGCAA +
Preference number: 5 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSMVRAS*MSRSMQ
Trigger: TTGCATCGACCTGCTCATCAAGCTGGCACGGACCAT...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGTACTGCGCGCGCTCGTaGTTTATGGTTAGCGGCGCC +
Preference number: 5 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARYCARS*FMVSGA
Trigger: GGCGCCGCTAACCATAAACAACGAGCGCGCGCAGTA...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGTCCTCGCTGTTCACCTaGAACCGGCCGAAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQSSLFT*NRPKGL
Trigger: CAGCCCCTTCGGCCGGTTCAAGGTGAACAGCGAGGA...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTTCCCCGATGCCGGAGTaGAGCAGGACGCCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSSPMPE*SRTPQE
Trigger: CTCCTGGGGCGTCCTGCTCAACTCCGGCATCGGGGA...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGATCCCCGATGCCGGAGTaGAGCAGGACGCCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGSPMPE*SRTPQE
Trigger: CTCCTGGGGCGTCCTGCTCAACTCCGGCATCGGGGA...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGAGGGTCGCAGGGGCGTaGCTGCGCGAGTCACATTCC +
Preference number: 5 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGRVAGA*LRESHS
Trigger: GGAATGTGACTCGCGCAGCAACGCCCCTGCGACCCT...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGGACTCGTTCTTGCCGTaGATGAGCTGCAGCCCGAGG +
Preference number: 5 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWDSFLP*MSCSPR
Trigger: CCTCGGGCTGCAGCTCATCAACGGCAAGAACGAGTC...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGTGGGCCGACTCGTTCTaGCCGTTGATGAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWWADSF*PLMSCS
Trigger: GCTGCAGCTCATCAACGGCAAGAACGAGTCGGCCCA...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGACCCATCAGTGTCCTaGGCCGGGCTAACTGGGCAG +
Preference number: 5 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPDPSVS*AGLTGQ
Trigger: CTGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTC...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGGACCCATCAGTGTCCTaGGCCGGGCTAACTGGGCAG +
Preference number: 5 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPDPSVS*AGLTGQ
Trigger: CTGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTC...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTAGGTGCAGGGCAGGGTaGAAGACAGTCCCGAGCCAG +
Preference number: 5 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSRCRAG*KTVPSQ
Trigger: CTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCT...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCAGGTGCAGGGCAGGGTaGAAGACAGTCCCGAGCCAG +
Preference number: 5 (lower is better)
Translates to: LGRWAPPGASHHGADRGIRCRAG*KTVPSQ
Trigger: CTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCT...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAACCGGGAGGTGGGGGTaGGGCGGTGCGCGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: RPSRAAGPISVLGRANWATGRWG*GGARLH
Trigger: GTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGT...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS CCA 90 bp AGCTCGTGCACGGCCTGGGCCACCACGCCCACGGCGTCGCTGATGTaGGCCGACTCGTTCTTGCCGTTGATGAGCGTCTGGGGCGTAGCG +
Preference number: 5 (lower is better)
Translates to: SSCTAWATTPTASLM*ADSFLPLMSVWGVA
Trigger: CGCTACGCCCCAGACGCTCATCAACGGCAAGAACGAGTCGGCCCACATCAGCGACGCCGTGGGCGTGGTGGCCCAGGCCGTGCACGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS CCA 90 bp GGCGGGTCGGTGATGTTCTCCTTCTCGAGGAGCTCGTGCACGGCCTaGGCCACCACGCCCACGGCGTCGCTGATGTGGGCCGACTCGTTC +
Preference number: 5 (lower is better)
Translates to: GGSVMFSFSRSSCTA*ATTPTASLMWADSF
Trigger: GAACGAGTCGGCCCACATCAGCGACGCCGTGGGCGTGGTGGCCCAGGCCGTGCACGAGCTCCTCGAGAAGGAGAACATCACCGACCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675295.1
ENST00000676396.1
CDS-3UTR CAA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGAGCACCGCGCCAATGTaGACGATCTTGGGGTCGCAC +
Preference number: 5 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQSTAPM*TILGSH
Trigger: GTGCGACCCCAAGATCGTCAACATTGGCGCGGTGCT...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACCAGGAGCCGTGCCGCTaGTTGGCCTGGTTCACGGCC +
Preference number: 5 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDQEPCR*LAWFTA
Trigger: GGCCGTGAACCAGGCCAACAAGCGGCACGGCTCCTG...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCGCCATCTGGATGGCGTaGGGCTTGTGCGTGACGGAG +
Preference number: 5 (lower is better)
Translates to: RARALGVLVLYKVAGRSRAIWMA*GLCVTE
Trigger: CTCCGTCACGCACAAGCCCAACGCCATCCAGATGGC...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGGGAGTGAAGTGGTCGTaGGGGGTAGGTGGATGGCTA +
Preference number: 5 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWGVKWS*GVGGWL
Trigger: TAGCCATCCACCTACCCCCAACGACCACTTCACTCC...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGAGCACCTTCTCTGCCTaGGGTCCGCGCTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARSTFSA*GPRLLS
Trigger: TGACAACAAGCGCGGACCCAAGGCAGAGAAGGTGCT...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371555.8
ENST00000371560.4
CDS-3UTR CAA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCAGGGCCGTCACGTTCTaGGTCCCTGGGTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPRAVTF*VPGSNC
Trigger: GCAGTTTGACCCAGGGACCAAGAACGTGACGGCCCT...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGAGGGCCGTCACGTTCTaGGTCCCTGGGTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQRAVTF*VPGSNC
Trigger: GCAGTTTGACCCAGGGACCAAGAACGTGACGGCCCT...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCCCGGTCTTCCAGATGTaGGTGTTGCCCACGCAGCCC +
Preference number: 5 (lower is better)
Translates to: RARALGVLVLYKVAGRSRPVFQM*VLPTQP
Trigger: GGGCTGCGTGGGCAACACCAACATCTGGAAGACCGG...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGGACATCAGCACTCTCTaGAAGAGCGGCCCGGTCTTC +
Preference number: 5 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWDISTL*KSGPVF
Trigger: GAAGACCGGGCCGCTCTTCAAGAGAGTGCTGATGTC...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGATTGTAGATGCCCACTaGCACCAGCTTGCGGTTCTG +
Preference number: 5 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSIVDAH*HQLAVL
Trigger: CAGAACCGCAAGCTGGTGCAAGTGGGCATCTACAAT...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGTCACTCAGCGTGGGCTaGACGTACACGAAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQSLSVG*TYTKGS
Trigger: GGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTGA...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGTCCTGTGTGCCGAACTaGCCATCTGCCACCAGGTGC +
Preference number: 5 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRSCVPN*PSATRC
Trigger: GCACCTGGTGGCAGATGGCAAGTTCGGCACACAGGA...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGTCCTGTGTGCCGAACTaGCCATCTGCCACCAGGTGC +
Preference number: 5 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPSCVPN*PSATRC
Trigger: GCACCTGGTGGCAGATGGCAAGTTCGGCACACAGGA...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGTCCTGTGTGCCGAACTaGCCATCTGCCACCAGGTGC +
Preference number: 5 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQSCVPN*PSATRC
Trigger: GCACCTGGTGGCAGATGGCAAGTTCGGCACACAGGA...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGTTCCACTCCTTCTTGTaGCTGTTGTTCACCCGCTCC +
Preference number: 5 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSFHSFL*LLFTRS
Trigger: GGAGCGGGTGAACAACAGCAACAAGAAGGAGTGGAA...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGTACTGCGCGCGCTCGTaGTTTATGGTTAGCGGCGCC +
Preference number: 5 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRYCARS*FMVSGA
Trigger: GGCGCCGCTAACCATAAACAACGAGCGCGCGCAGTA...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCTCAGCCGAGGGTCGTaGATGCCCGTGATGCGCTCC +
Preference number: 5 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPLSRGS*MPVMRS
Trigger: GGAGCGCATCACGGGCATCAACGACCCTCGGCTGAG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCTCAGCCGAGGGTCGTaGATGCCCGTGATGCGCTCC +
Preference number: 5 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSLSRGS*MPVMRS
Trigger: GGAGCGCATCACGGGCATCAACGACCCTCGGCTGAG...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCTCAGCCGAGGGTCGTaGATGCCCGTGATGCGCTCC +
Preference number: 5 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLLSRGS*MPVMRS
Trigger: GGAGCGCATCACGGGCATCAACGACCCTCGGCTGAG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCTTCCAGGGGCTGTCTTaGCGCATGCCTATGCCGAAG +
Preference number: 5 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSFQGLS*RMPMPK
Trigger: CTTCGGCATAGGCATGCGCAAAGACAGCCCCTGGAA...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCCATTCTCGTGGGACTaGAGGATGGACAGGGAGACG +
Preference number: 5 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGPFSWD*RMDRET
Trigger: CGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATGG...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGTACCGAACCCACGTCTaGTCCAGGTCTTCCATGAAG +
Preference number: 5 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSYRTHV*SRSSMK
Trigger: CTTCATGGAAGACCTGGACAAGACGTGGGTTCGGTA...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GTTAGCGGCGCCACGATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCAGCCTGGCCGGCCACTaGGGCCCTCGCTCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: VSGATIMSACPLSSSPIISLAGH*GPRSCL
Trigger: CAGGCAGGAGCGAGGGCCCAAGTGGCCGGCCAGGCT...GATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCGCCGCTAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGGAGGACCTACGCCTCTaGAAGCTGGAAGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPEDLRL*KLEARV
Trigger: CACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCTC...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371561.8
CDS-3UTR CAA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGAGGACCTACGCCTCTaGAAGCTGGAAGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQEDLRL*KLEARV
Trigger: CACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCTC...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371561.8
CDS-3UTR CAA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTGACTCGTTCTTGCCGTaGATGAGCTGCAGCCCGAGG +
Preference number: 5 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSDSFLP*MSCSPR
Trigger: CCTCGGGCTGCAGCTCATCAACGGCAAGAACGAGTC...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGTGGGCCGACTCGTTCTaGCCGTTGATGAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQWADSF*PLMSCS
Trigger: GCTGCAGCTCATCAACGGCAAGAACGAGTCGGCCCA...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGTGGGCCGACTCGTTCTaGCCGTTGATGAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRWADSF*PLMSCS
Trigger: GCTGCAGCTCATCAACGGCAAGAACGAGTCGGCCCA...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCGAGGGATCTGAGAGGTaGAGCGGGCCCGTGATATCA +
Preference number: 5 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSEGSER*SGPVIS
Trigger: TGATATCACGGGCCCGCTCAACCTCTCAGATCCCTC...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGGACCCATCAGTGTCCTaGGCCGGGCTAACTGGGCAG +
Preference number: 5 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGDPSVS*AGLTGQ
Trigger: CTGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTC...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGTGGTACTGCGTGTCTTaGGAGGACCTACGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: EGLSPLESGGGGPRRREAWYCVS*EDLRLL
Trigger: CAAGAGGCGTAGGTCCTCCAAAGACACGCAGTACCA...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371553.7
CDS CCA 90 bp AGCTCGTGCACGGCCTGGGCCACCACGCCCACGGCGTCGCTGATGTaGGCCGACTCGTTCTTGCCGTTGATGAGCTGCAGCCCGAGGATG +
Preference number: 5 (lower is better)
Translates to: SSCTAWATTPTASLM*ADSFLPLMSCSPRM
Trigger: CATCCTCGGGCTGCAGCTCATCAACGGCAAGAACGAGTCGGCCCACATCAGCGACGCCGTGGGCGTGGTGGCCCAGGCCGTGCACGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675295.1
ENST00000676396.1
CDS-3UTR CAA 90 bp TCCTATGGAATGGGTACCGGCGGGCGACTCTGGAGACAGAGGGGCCAGGCGGAGGAGCCGTGCCGCTTGTaGGCCTGGTTCACGGCCTCG +
Preference number: 5 (lower is better)
Translates to: SYGMGTGGRLWRQRGQAEEPCRL*AWFTAS
Trigger: CGAGGCCGTGAACCAGGCCAACAAGCGGCACGGCTC...CTCCGCCTGGCCCCTCTGTCTCCAGAGTCGCCCGCCGGTACCCATTCCATAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGCCATCTGGATGGCGTaGGGCTTGTGCGTGACGGAG +
Preference number: 5 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLAIWMA*GLCVTE
Trigger: CTCCGTCACGCACAAGCCCAACGCCATCCAGATGGC...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCGGAGTGAAGTGGTCGTaGGGGGTAGGTGGATGGCTA +
Preference number: 5 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAGVKWS*GVGGWL
Trigger: TAGCCATCCACCTACCCCCAACGACCACTTCACTCC...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGAGTGAAGTGGTCGTaGGGGGTAGGTGGATGGCTA +
Preference number: 5 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQGVKWS*GVGGWL
Trigger: TAGCCATCCACCTACCCCCAACGACCACTTCACTCC...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGGAGTGAAGTGGTCGTaGGGGGTAGGTGGATGGCTA +
Preference number: 5 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPGVKWS*GVGGWL
Trigger: TAGCCATCCACCTACCCCCAACGACCACTTCACTCC...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGAGCACCTTCTCTGCCTaGGGTCCGCGCTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRSTFSA*GPRLLS
Trigger: TGACAACAAGCGCGGACCCAAGGCAGAGAAGGTGCT...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371555.8
ENST00000371560.4
CDS-3UTR CAA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGAGGGCCGTCACGTTCTaGGTCCCTGGGTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGRAVTF*VPGSNC
Trigger: GCAGTTTGACCCAGGGACCAAGAACGTGACGGCCCT...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCGGTCTTCCAGATGTaGGTGTTGCCCACGCAGCCC +
Preference number: 5 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSPVFQM*VLPTQP
Trigger: GGGCTGCGTGGGCAACACCAACATCTGGAAGACCGG...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGACATCAGCACTCTCTaGAAGAGCGGCCCGGTCTTC +
Preference number: 5 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQDISTL*KSGPVF
Trigger: GAAGACCGGGCCGCTCTTCAAGAGAGTGCTGATGTC...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGACATCAGCACTCTCTaGAAGAGCGGCCCGGTCTTC +
Preference number: 5 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRDISTL*KSGPVF
Trigger: GAAGACCGGGCCGCTCTTCAAGAGAGTGCTGATGTC...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGCGGTCCCCATCCTCATaGAACTCCACGCGACCAGTC +
Preference number: 5 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGRSPSS*NSTRPV
Trigger: GACTGGTCGCGTGGAGTTCAATGAGGATGGGGACCG...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGATTGTAGATGCCCACTaGCACCAGCTTGCGGTTCTG +
Preference number: 5 (lower is better)
Translates to: EGLSPLESGGGGPRRREAIVDAH*HQLAVL
Trigger: CAGAACCGCAAGCTGGTGCAAGTGGGCATCTACAAT...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGGTGCAGATCACCTTCTaGACTGGGTCGCCGTTGACT +
Preference number: 5 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWVQITF*TGSPLT
Trigger: AGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCAC...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGGTGCAGATCACCTTCTaGACTGGGTCGCCGTTGACT +
Preference number: 5 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARVQITF*TGSPLT
Trigger: AGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCAC...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GTTAGCGGCGCCACGATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCCCCGGCGACGTGTCGTaGGGCCCGGTGCAGATCACC +
Preference number: 5 (lower is better)
Translates to: VSGATIMSACPLSSSPIIPGDVS*GPVQIT
Trigger: GGTGATCTGCACCGGGCCCAACGACACGTCGCCGGG...GATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCGCCGCTAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTCCCGGCGACGTGTCGTaGGGCCCGGTGCAGATCACC +
Preference number: 5 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPPGDVS*GPVQIT
Trigger: GGTGATCTGCACCGGGCCCAACGACACGTCGCCGGG...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTACCCGGCGACGTGTCGTaGGGCCCGGTGCAGATCACC +
Preference number: 5 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLPGDVS*GPVQIT
Trigger: GGTGATCTGCACCGGGCCCAACGACACGTCGCCGGG...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCTACTGCGCGCGCTCGTaGTTTATGGTTAGCGGCGCC +
Preference number: 5 (lower is better)
Translates to: RARALGVLVLYKVAGRSRYCARS*FMVSGA
Trigger: GGCGCCGCTAACCATAAACAACGAGCGCGCGCAGTA...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTTCCTCGCTGTTCACCTaGAACCGGCCGAAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSSSLFT*NRPKGL
Trigger: CAGCCCCTTCGGCCGGTTCAAGGTGAACAGCGAGGA...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGATCCTCGCTGTTCACCTaGAACCGGCCGAAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGSSLFT*NRPKGL
Trigger: CAGCCCCTTCGGCCGGTTCAAGGTGAACAGCGAGGA...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGAAGGCATGCAGCTTGTaGTCTCTCACGGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWKACSL*SLTAWM
Trigger: CATCCAGGCCGTGAGAGACAACAAGCTGCATGCCTT...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCAAGGCATGCAGCTTGTaGTCTCTCACGGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGKACSL*SLTAWM
Trigger: CATCCAGGCCGTGAGAGACAACAAGCTGCATGCCTT...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCCATTCTCGTGGGACTaGAGGATGGACAGGGAGACG +
Preference number: 5 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAPFSWD*RMDRET
Trigger: CGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATGG...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGCCATTCTCGTGGGACTaGAGGATGGACAGGGAGACG +
Preference number: 5 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPPFSWD*RMDRET
Trigger: CGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATGG...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTAGGGTCGCAGGGGCGTaGCTGCGCGAGTCACATTCC +
Preference number: 5 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPRVAGA*LRESHS
Trigger: GGAATGTGACTCGCGCAGCAACGCCCCTGCGACCCT...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp AGGTGGCCTGTGCCCGCCAGTGCTGGCAGCGGCCAGGTCCCCAGGGGACCTGTGCCCCTTACCGTGTCTTaGGAGGACCTACGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: RWPVPASAGSGQVPRGPVPLTVS*EDLRLL
Trigger: CAAGAGGCGTAGGTCCTCCAAAGACACGGTAAGGGG...CACAGGTCCCCTGGGGACCTGGCCGCTGCCAGCACTGGCGGGCACAGGCCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGTGGGCCGACTCGTTCTaGCCGTTGATGAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGWADSF*PLMSCS
Trigger: GCTGCAGCTCATCAACGGCAAGAACGAGTCGGCCCA...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGAGGGATCTGAGAGGTaGAGCGGGCCCGTGATATCA +
Preference number: 5 (lower is better)
Translates to: TDGRPRVGSLWGGWASLREGSER*SGPVIS
Trigger: TGATATCACGGGCCCGCTCAACCTCTCAGATCCCTC...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGAGGGATCTGAGAGGTaGAGCGGGCCCGTGATATCA +
Preference number: 5 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPEGSER*SGPVIS
Trigger: TGATATCACGGGCCCGCTCAACCTCTCAGATCCCTC...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCAGCACCTTCTCTGCCTaGGACTCACGCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RARALGVLVLYKVAGRSRSTFSA*DSRSSS
Trigger: GCTGGAGGAGCGTGAGTCCAAGGCAGAGAAGGTGCT...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371550.8
ENST00000371559.8
ENST00000371561.8
CDS CCA 90 bp ACCCGGAGCCCGTCATGTTCAGCATCGCGGCTGCGCGGTATACAGTaGCAGCATCGTCCTCGCTGTGGGGCAGACGGGGATGACGGGCCA +
Preference number: 5 (lower is better)
Translates to: TRSPSCSASRLRGIQ*QHRPRCGADGDDGP
Trigger: TGGCCCGTCATCCCCGTCTGCCCCACAGCGAGGACGATGCTGCCACTGTATACCGCGCAGCCGCGATGCTGAACATGACGGGCTCCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS-3UTR CAA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTCCAATGTTGACGATCTaGGGGTCGCACGCGGCACGG +
Preference number: 5 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPPMLTI*GSHAAR
Trigger: CCGTGCCGCGTGCGACCCCAAGATCGTCAACATTGG...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACCCAATGTTGACGATCTaGGGGTCGCACGCGGCACGG +
Preference number: 5 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDPMLTI*GSHAAR
Trigger: CCGTGCCGCGTGCGACCCCAAGATCGTCAACATTGG...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGAGCACCGCGCCAATGTaGACGATCTTGGGGTCGCAC +
Preference number: 5 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLSTAPM*TILGSH
Trigger: GTGCGACCCCAAGATCGTCAACATTGGCGCGGTGCT...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTAGCACCGCGCCAATGTaGACGATCTTGGGGTCGCAC +
Preference number: 5 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSSTAPM*TILGSH
Trigger: GTGCGACCCCAAGATCGTCAACATTGGCGCGGTGCT...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTCAGGAGCCGTGCCGCTaGTTGGCCTGGTTCACGGCC +
Preference number: 5 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPQEPCR*LAWFTA
Trigger: GGCCGTGAACCAGGCCAACAAGCGGCACGGCTCCTG...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTACAGGAGCCGTGCCGCTaGTTGGCCTGGTTCACGGCC +
Preference number: 5 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLQEPCR*LAWFTA
Trigger: GGCCGTGAACCAGGCCAACAAGCGGCACGGCTCCTG...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCCATCTGGATGGCGTaGGGCTTGTGCGTGACGGAG +
Preference number: 5 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPAIWMA*GLCVTE
Trigger: CTCCGTCACGCACAAGCCCAACGCCATCCAGATGGC...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCGACATCAGCACTCTCTaGAAGAGCGGCCCGGTCTTC +
Preference number: 5 (lower is better)
Translates to: RARALGVLVLYKVAGRSRDISTL*KSGPVF
Trigger: GAAGACCGGGCCGCTCTTCAAGAGAGTGCTGATGTC...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTTCACTCAGCGTGGGCTaGACGTACACGAAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSSLSVG*TYTKGS
Trigger: GGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTGA...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGATCACTCAGCGTGGGCTaGACGTACACGAAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGSLSVG*TYTKGS
Trigger: GGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTGA...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCTCACTCAGCGTGGGCTaGACGTACACGAAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPSLSVG*TYTKGS
Trigger: GGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTGA...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGTCACTCAGCGTGGGCTaGACGTACACGAAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLSLSVG*TYTKGS
Trigger: GGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTGA...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGACTGTGAACTCCTCCTaGCATGTCCCATCACTCAGC +
Preference number: 5 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARTVNSS*HVPSLS
Trigger: GCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGT...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGACTGTGAACTCCTCCTaGCATGTCCCATCACTCAGC +
Preference number: 5 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWTVNSS*HVPSLS
Trigger: GCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGT...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGTGCAGATCACCTTCTaGACTGGGTCGCCGTTGACT +
Preference number: 5 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRVQITF*TGSPLT
Trigger: AGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCAC...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGATGGTCCGTGCCAGCTaGATGAGCAGGTCGATGCAA +
Preference number: 5 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRMVRAS*MSRSMQ
Trigger: TTGCATCGACCTGCTCATCAAGCTGGCACGGACCAT...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGATCCTGTGTGCCGAACTaGCCATCTGCCACCAGGTGC +
Preference number: 5 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGSCVPN*PSATRC
Trigger: GCACCTGGTGGCAGATGGCAAGTTCGGCACACAGGA...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCTTCCACTCCTTCTTGTaGCTGTTGTTCACCCGCTCC +
Preference number: 5 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSFHSFL*LLFTRS
Trigger: GGAGCGGGTGAACAACAGCAACAAGAAGGAGTGGAA...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCTTCCACTCCTTCTTGTaGCTGTTGTTCACCCGCTCC +
Preference number: 5 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGFHSFL*LLFTRS
Trigger: GGAGCGGGTGAACAACAGCAACAAGAAGGAGTGGAA...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCCATTCCACTCCTTCTaGTTGCTGTTGTTCACCCGC +
Preference number: 5 (lower is better)
Translates to: PSSAAPVRTLVQQGLPARPFHSF*LLLFTR
Trigger: GCGGGTGAACAACAGCAACAAGAAGGAGTGGAATGG...CCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGATACTGCGCGCGCTCGTaGTTTATGGTTAGCGGCGCC +
Preference number: 5 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGYCARS*FMVSGA
Trigger: GGCGCCGCTAACCATAAACAACGAGCGCGCGCAGTA...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCGTCAGGCCCTGGTACTaGAAGGGCTTGGAAAACTCG +
Preference number: 5 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAAVRPWY*KGLENS
Trigger: CGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGAC...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGTCAGGCCCTGGTACTaGAAGGGCTTGGAAAACTCG +
Preference number: 5 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRVRPWY*KGLENS
Trigger: CGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGAC...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGCGGGGAATCTCCTTCTaGACCAGAATAGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPRGISF*TRIVRP
Trigger: GGGCCTGACTATTCTGGTCAAGAAGGAGATTCCCCG...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCCGGGGAATCTCCTTCTaGACCAGAATAGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPRGISF*TRIVRP
Trigger: GGGCCTGACTATTCTGGTCAAGAAGGAGATTCCCCG...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTCGGGGAATCTCCTTCTaGACCAGAATAGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSRGISF*TRIVRP
Trigger: GGGCCTGACTATTCTGGTCAAGAAGGAGATTCCCCG...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp GACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGAAGGCATGCAGCTTGTaGTCTCTCACGGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: DGREAQGGQSLGRVGFPQKACSL*SLTAWM
Trigger: CATCCAGGCCGTGAGAGACAACAAGCTGCATGCCTT...CTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGTTCCAGGGGCTGTCTTaGCGCATGCCTATGCCGAAG +
Preference number: 5 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGFQGLS*RMPMPK
Trigger: CTTCGGCATAGGCATGCGCAAAGACAGCCCCTGGAA...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCTTCCAGGGGCTGTCTTaGCGCATGCCTATGCCGAAG +
Preference number: 5 (lower is better)
Translates to: RARALGVLVLYKVAGRSRFQGLS*RMPMPK
Trigger: CTTCGGCATAGGCATGCGCAAAGACAGCCCCTGGAA...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCTACCGAACCCACGTCTaGTCCAGGTCTTCCATGAAG +
Preference number: 5 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGYRTHV*SRSSMK
Trigger: CTTCATGGAAGACCTGGACAAGACGTGGGTTCGGTA...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGTACCGAACCCACGTCTaGTCCAGGTCTTCCATGAAG +
Preference number: 5 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWYRTHV*SRSSMK
Trigger: CTTCATGGAAGACCTGGACAAGACGTGGGTTCGGTA...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CAGGACGCCCCAGGAGAACCACATGGCCGAGGACAGGGTCAGTGCGTCCTCCTCAGGGTCGCAGGGGCGTaGCTGCGCGAGTCACATTCC +
Preference number: 5 (lower is better)
Translates to: QDAPGEPHGRGQGQCVLLRVAGA*LRESHS
Trigger: GGAATGTGACTCGCGCAGCAACGCCCCTGCGACCCT...GAGGAGGACGCACTGACCCTGTCCTCGGCCATGTGGTTCTCCTGGGGCGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGACTCGTTCTTGCCGTaGATGAGCTGCAGCCCGAGG +
Preference number: 5 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPDSFLP*MSCSPR
Trigger: CCTCGGGCTGCAGCTCATCAACGGCAAGAACGAGTC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACCGGTGCTCGTGTCTTaGGAGGACCTACGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGPVLVS*EDLRLL
Trigger: CAAGAGGCGTAGGTCCTCCAAAGACACGAGCACCGG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371546.8
ENST00000371561.8
CDS-3UTR CAA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGTGTGTCTTTTTGGTTTaGCAAAGCGCCGCGTCCACC +
Preference number: 5 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWCVFLV*QSAAST
Trigger: GGTGGACGCGGCGCTTTGCAAAACCAAAAAGACACA...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCGAGGGATCTGAGAGGTaGAGCGGGCCCGTGATATCA +
Preference number: 5 (lower is better)
Translates to: RARALGVLVLYKVAGRSREGSER*SGPVIS
Trigger: TGATATCACGGGCCCGCTCAACCTCTCAGATCCCTC...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGGAGGGATCTGAGAGGTaGAGCGGGCCCGTGATATCA +
Preference number: 5 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGEGSER*SGPVIS
Trigger: TGATATCACGGGCCCGCTCAACCTCTCAGATCCCTC...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACGACCCATCAGTGTCCTaGGCCGGGCTAACTGGGCAG +
Preference number: 5 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDDPSVS*AGLTGQ
Trigger: CTGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTC...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTAGGTGCAGGGCAGGGTaGAAGACAGTCCCGAGCCAG +
Preference number: 5 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPRCRAG*KTVPSQ
Trigger: CTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCT...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCAGCACCTTCTCTGCCTaGGACTCACGCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPSTFSA*DSRSSS
Trigger: GCTGGAGGAGCGTGAGTCCAAGGCAGAGAAGGTGCT...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371550.8
ENST00000371561.8
CDS TCA 90 bp GGAACATCTGCTCGTGCTTCCGCGTGCTCAGCACCGCGCCAATGTTaGCGATCTTGGGGTCGCACGCGGCACGGGCGACGGAGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: GTSARASACSAPRQC*RSWGRTRHGRRSRR
Trigger: TCTCCTGCTCCGTCGCCCGTGCCGCGTGCGACCCCAAGATCGTCAACATTGGCGCGGTGCTGAGCACGCGGAAGCACGAGCAGATGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS TCA 90 bp TCTTCCAGATGTTGGTGTTGCCCACGCAGCCCCGCGGCGGGTCGGTaGTGTTCTCCTTCTCGAGGAGCTCGTGCACGGCCTGGGCCACCA +
Preference number: 5 (lower is better)
Translates to: SSRCWCCPRSPAAGR*CSPSRGARARPGPP
Trigger: TGGTGGCCCAGGCCGTGCACGAGCTCCTCGAGAAGGAGAACATCACCGACCCGCCGCGGGGCTGCGTGGGCAACACCAACATCTGGAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675295.1
ENST00000676396.1
CDS TCA 90 bp TCTGCCTTGGACTCACGCTCCTCCAGCAGCGTCTCCAGGCGTTTCTaGGCCGCCCGGCCCTCGTGGTCGTCGCTGACCAGCAGGATGATG +
Preference number: 5 (lower is better)
Translates to: SALDSRSSSSVSRRF*AARPSWSSLTSRMM
Trigger: CATCATCCTGCTGGTCAGCGACGACCACGAGGGCCGGGCGGCTCAGAAACGCCTGGAGACGCTGCTGGAGGAGCGTGAGTCCAAGGCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371550.8
ENST00000371559.8
ENST00000371561.8
ENST00000471122.5
CDS TCA 90 bp TGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTaGGAGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCGT +
Preference number: 5 (lower is better)
Translates to: WAPPGASHHGADRGI*EVERARDISGMVLR
Trigger: ACGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371553.7
CDS GCA 90 bp CTGCCTTCTAGTCCGAGGAGCCCTGGCTGGCCCCACCCTGCGTTCTaGCCTGGTGAGGGGGCTGCATCTGTCTCCGTGCTAGAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: LPSSPRSPGWPHPAF*PGEGAASVSVLEGH
Trigger: ATGACCCTCTAGCACGGAGACAGATGCAGCCCCCTCACCAGGGCAGAACGCAGGGTGGGGCCAGCCAGGGCTCCTCGGACTAGAAGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS-3UTR CAA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGGAGTGAAGTGGTCGTaGGGGGTAGGTGGATGGCTA +
Preference number: 5 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPGVKWS*GVGGWL
Trigger: TAGCCATCCACCTACCCCCAACGACCACTTCACTCC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGAGTGAAGTGGTCGTaGGGGGTAGGTGGATGGCTA +
Preference number: 5 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLGVKWS*GVGGWL
Trigger: TAGCCATCCACCTACCCCCAACGACCACTTCACTCC...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTGACATCAGCACTCTCTaGAAGAGCGGCCCGGTCTTC +
Preference number: 5 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSDISTL*KSGPVF
Trigger: GAAGACCGGGCCGCTCTTCAAGAGAGTGCTGATGTC...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGACCCCATCCGCATACTaGGAAGACATCAGCACTCTC +
Preference number: 5 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRTPSAY*EDISTL
Trigger: GAGAGTGCTGATGTCTTCCAAGTATGCGGATGGGGT...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACCCACTTGCACCAGCTaGCGGTTCTGCAGGTTCATG +
Preference number: 5 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGPTCTS*RFCRFM
Trigger: CATGAACCTGCAGAACCGCAAGCTGGTGCAAGTGGG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCCCACTTGCACCAGCTaGCGGTTCTGCAGGTTCATG +
Preference number: 5 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLPTCTS*RFCRFM
Trigger: CATGAACCTGCAGAACCGCAAGCTGGTGCAAGTGGG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCCCACTTGCACCAGCTaGCGGTTCTGCAGGTTCATG +
Preference number: 5 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPPTCTS*RFCRFM
Trigger: CATGAACCTGCAGAACCGCAAGCTGGTGCAAGTGGG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCATTGTAGATGCCCACTaGCACCAGCTTGCGGTTCTG +
Preference number: 5 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPIVDAH*HQLAVL
Trigger: CAGAACCGCAAGCTGGTGCAAGTGGGCATCTACAAT...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGATTGTAGATGCCCACTaGCACCAGCTTGCGGTTCTG +
Preference number: 5 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPIVDAH*HQLAVL
Trigger: CAGAACCGCAAGCTGGTGCAAGTGGGCATCTACAAT...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGATTGTAGATGCCCACTaGCACCAGCTTGCGGTTCTG +
Preference number: 5 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRIVDAH*HQLAVL
Trigger: CAGAACCGCAAGCTGGTGCAAGTGGGCATCTACAAT...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACTCACTCAGCGTGGGCTaGACGTACACGAAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDSLSVG*TYTKGS
Trigger: GGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTGA...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTCTGCCCCGTCCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCACTGTGAACTCCTCCTaGCATGTCCCATCACTCAGC +
Preference number: 5 (lower is better)
Translates to: LCPVLSRSGPHLGPAGAATVNSS*HVPSLS
Trigger: GCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGT...GGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGGACGGGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCACTGTGAACTCCTCCTaGCATGTCCCATCACTCAGC +
Preference number: 5 (lower is better)
Translates to: LGRWAPPGASHHGADRGITVNSS*HVPSLS
Trigger: GCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGT...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACTCCTGTGTGCCGAACTaGCCATCTGCCACCAGGTGC +
Preference number: 5 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDSCVPN*PSATRC
Trigger: GCACCTGGTGGCAGATGGCAAGTTCGGCACACAGGA...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTGGGCAGGTGGGCGCCTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCCCATTCCACTCCTTCTaGTTGCTGTTGTTCACCCGC +
Preference number: 5 (lower is better)
Translates to: LGRWAPPGASHHGADRGIPFHSF*LLLFTR
Trigger: GCGGGTGAACAACAGCAACAAGAAGGAGTGGAATGG...GATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAGGCGCCCACCTGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp GGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCCCATTCCACTCCTTCTaGTTGCTGTTGTTCACCCGC +
Preference number: 5 (lower is better)
Translates to: GGPGWAVSGAGGLPSGLPPFHSF*LLLFTR
Trigger: GCGGGTGAACAACAGCAACAAGAAGGAGTGGAATGG...GGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGCCATTCCACTCCTTCTaGTTGCTGTTGTTCACCCGC +
Preference number: 5 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPPFHSF*LLLFTR
Trigger: GCGGGTGAACAACAGCAACAAGAAGGAGTGGAATGG...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTTACTGCGCGCGCTCGTaGTTTATGGTTAGCGGCGCC +
Preference number: 5 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPYCARS*FMVSGA
Trigger: GGCGCCGCTAACCATAAACAACGAGCGCGCGCAGTA...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGTGGTACTTGAAGGGCTaGGAAAACTCGATGTACTGC +
Preference number: 5 (lower is better)
Translates to: EGLSPLESGGGGPRRREAWYLKG*ENSMYC
Trigger: GCAGTACATCGAGTTTTCCAAGCCCTTCAAGTACCA...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGCGGGGAATCTCCTTCTaGACCAGAATAGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGRGISF*TRIVRP
Trigger: GGGCCTGACTATTCTGGTCAAGAAGGAGATTCCCCG...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCAAGGCATGCAGCTTGTaGTCTCTCACGGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: RARALGVLVLYKVAGRSRKACSL*SLTAWM
Trigger: CATCCAGGCCGTGAGAGACAACAAGCTGCATGCCTT...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCCCATTCTCGTGGGACTaGAGGATGGACAGGGAGACG +
Preference number: 5 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPPFSWD*RMDRET
Trigger: CGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATGG...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCCATTCTCGTGGGACTaGAGGATGGACAGGGAGACG +
Preference number: 5 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLPFSWD*RMDRET
Trigger: CGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATGG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGACCATTCTCGTGGGACTaGAGGATGGACAGGGAGACG +
Preference number: 5 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGPFSWD*RMDRET
Trigger: CGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATGG...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCCTTCCCGTACCGAACCCACGTCTaGTCCAGGTCTTCCATGAAG +
Preference number: 5 (lower is better)
Translates to: EAQGGQSLGRVGFPQAFPYRTHV*SRSSMK
Trigger: CTTCATGGAAGACCTGGACAAGACGTGGGTTCGGTA...CGGGAAGGCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAAGGGTCGCAGGGGCGTaGCTGCGCGAGTCACATTCC +
Preference number: 5 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLRVAGA*LRESHS
Trigger: GGAATGTGACTCGCGCAGCAACGCCCCTGCGACCCT...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CAAGAGCGGGCGGATGAGAGGTGTGGAGCCTCCAGCAACCCCCATCCCCCAGCAAGGGTGTCAAGGGGCTaGGGTCGGCGGAGGGCAAAA +
Preference number: 5 (lower is better)
Translates to: QERADERCGASSNPHPPARVSRG*GRRRAK
Trigger: TTTTGCCCTCCGCCGACCCAAGCCCCTTGACACCCT...TGCTGGGGGATGGGGGTTGCTGGAGGCTCCACACCTCTCATCCGCCCGCTCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACTGGGCCGACTCGTTCTaGCCGTTGATGAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDWADSF*PLMSCS
Trigger: GCTGCAGCTCATCAACGGCAAGAACGAGTCGGCCCA...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGTGCTCCGGGGCTCTGCGTGGGCCGGGCCGCTGTCCCGTCCGTCTGTCTGTCTTGTGTCTTTTTGGTTTaGCAAAGCGCCGCGTCCACC +
Preference number: 5 (lower is better)
Translates to: GAPGLCVGRAAVPSVCLSCVFLV*QSAAST
Trigger: GGTGGACGCGGCGCTTTGCAAAACCAAAAAGACACA...AGACAGACAGACGGACGGGACAGCGGCCCGGCCCACGCAGAGCCCCGGAGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTAGCACCTTCTCTGCCTaGGACTCACGCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPSTFSA*DSRSSS
Trigger: GCTGGAGGAGCGTGAGTCCAAGGCAGAGAAGGTGCT...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371550.8
ENST00000371559.8
ENST00000371561.8
CDS GCA 90 bp GAGCCGTGCCGCTTGTTGGCCTGGTTCACGGCCTCGCGGAACATCTaGTCGTGCTTCCGCGTGCTCAGCACCGCGCCAATGTTGACGATC +
Preference number: 5 (lower is better)
Translates to: EPCRLLAWFTASRNI*SCFRVLSTAPMLTI
Trigger: GATCGTCAACATTGGCGCGGTGCTGAGCACGCGGAAGCACGAGCAGATGTTCCGCGAGGCCGTGAACCAGGCCAACAAGCGGCACGGCTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS-3UTR CAA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGTGGATGGCGTTGGGCTaGTGCGTGACGGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGWMALG*CVTEVA
Trigger: TGCCACCTCCGTCACGCACAAGCCCAACGCCATCCA...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTTGGATGGCGTTGGGCTaGTGCGTGACGGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPWMALG*CVTEVA
Trigger: TGCCACCTCCGTCACGCACAAGCCCAACGCCATCCA...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAGCCATCTGGATGGCGTaGGGCTTGTGCGTGACGGAG +
Preference number: 5 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLAIWMA*GLCVTE
Trigger: CTCCGTCACGCACAAGCCCAACGCCATCCAGATGGC...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGGCCATCTGGATGGCGTaGGGCTTGTGCGTGACGGAG +
Preference number: 5 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGAIWMA*GLCVTE
Trigger: CTCCGTCACGCACAAGCCCAACGCCATCCAGATGGC...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACGGAGGGGCAGAGCGCGGCTGCGCACGGGCCGCACGGGGAAGGCACGCGCTCGGTTGTCATAGGACAGTaGGTCGAGGTTTTCATAGTT +
Preference number: 5 (lower is better)
Translates to: TEGQSAAAHGPHGEGTRSVVIGQ*VEVFIV
Trigger: AACTATGAAAACCTCGACCAACTGTCCTATGACAAC...CGAGCGCGTGCCTTCCCCGTGCGGCCCGTGCGCAGCCGCGCTCTGCCCCTCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371555.8
ENST00000371560.4
CDS-3UTR CAA 90 bp CAAGAGCGGGCGGATGAGAGGTGTGGAGCCTCCAGCAACCCCCATCCCCCAGCAAGGGCCGTCACGTTCTaGGTCCCTGGGTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: QERADERCGASSNPHPPARAVTF*VPGSNC
Trigger: GCAGTTTGACCCAGGGACCAAGAACGTGACGGCCCT...TGCTGGGGGATGGGGGTTGCTGGAGGCTCCACACCTCTCATCCGCCCGCTCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTACCGGTCTTCCAGATGTaGGTGTTGCCCACGCAGCCC +
Preference number: 5 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLPVFQM*VLPTQP
Trigger: GGGCTGCGTGGGCAACACCAACATCTGGAAGACCGG...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACGACATCAGCACTCTCTaGAAGAGCGGCCCGGTCTTC +
Preference number: 5 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDDISTL*KSGPVF
Trigger: GAAGACCGGGCCGCTCTTCAAGAGAGTGCTGATGTC...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGACCCCATCCGCATACTaGGAAGACATCAGCACTCTC +
Preference number: 5 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGTPSAY*EDISTL
Trigger: GAGAGTGCTGATGTCTTCCAAGTATGCGGATGGGGT...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACTGTGAACTCCTCCTaGCATGTCCCATCACTCAGC +
Preference number: 5 (lower is better)
Translates to: RARALGVLVLYKVAGRSRTVNSS*HVPSLS
Trigger: GCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGT...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGTGCAGATCACCTTCTaGACTGGGTCGCCGTTGACT +
Preference number: 5 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPVQITF*TGSPLT
Trigger: AGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCAC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGATGGTCCGTGCCAGCTaGATGAGCAGGTCGATGCAA +
Preference number: 5 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLMVRAS*MSRSMQ
Trigger: TTGCATCGACCTGCTCATCAAGCTGGCACGGACCAT...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTATGGTCCGTGCCAGCTaGATGAGCAGGTCGATGCAA +
Preference number: 5 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSMVRAS*MSRSMQ
Trigger: TTGCATCGACCTGCTCATCAAGCTGGCACGGACCAT...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCTTCCACTCCTTCTTGTaGCTGTTGTTCACCCGCTCC +
Preference number: 5 (lower is better)
Translates to: RARALGVLVLYKVAGRSRFHSFL*LLFTRS
Trigger: GGAGCGGGTGAACAACAGCAACAAGAAGGAGTGGAA...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TGCAGAGGAGCGCAGGCGCCCGAGGAGGGGCGACCCAGCCAGCTGGGGCCATGGTGGTACTTGAAGGGCTaGGAAAACTCGATGTACTGC +
Preference number: 5 (lower is better)
Translates to: CRGAQAPEEGRPSQLGPWWYLKG*ENSMYC
Trigger: GCAGTACATCGAGTTTTCCAAGCCCTTCAAGTACCA...CCATGGCCCCAGCTGGCTGGGTCGCCCCTCCTCGGGCGCCTGCGCTCCTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGCTGGTACTTGAAGGGCTaGGAAAACTCGATGTACTGC +
Preference number: 5 (lower is better)
Translates to: RTGGPGWAVSGAGGLPSGWYLKG*ENSMYC
Trigger: GCAGTACATCGAGTTTTCCAAGCCCTTCAAGTACCA...GCCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGTCAGGCCCTGGTACTaGAAGGGCTTGGAAAACTCG +
Preference number: 5 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPVRPWY*KGLENS
Trigger: CGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGAC...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGCGGGGAATCTCCTTCTaGACCAGAATAGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLRGISF*TRIVRP
Trigger: GGGCCTGACTATTCTGGTCAAGAAGGAGATTCCCCG...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTATCCTCGCTGTTCACCTaGAACCGGCCGAAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLSSLFT*NRPKGL
Trigger: CAGCCCCTTCGGCCGGTTCAAGGTGAACAGCGAGGA...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGTCCTCGCTGTTCACCTaGAACCGGCCGAAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGSSLFT*NRPKGL
Trigger: CAGCCCCTTCGGCCGGTTCAAGGTGAACAGCGAGGA...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTTCCTCGCTGTTCACCTaGAACCGGCCGAAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPSSLFT*NRPKGL
Trigger: CAGCCCCTTCGGCCGGTTCAAGGTGAACAGCGAGGA...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCACCCGGAAAGGCATGCAGCTTGTaGTCTCTCACGGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: GPWECWFCTRWRAGHAPGKACSL*SLTAWM
Trigger: CATCCAGGCCGTGAGAGACAACAAGCTGCATGCCTT...TCCGGGTGCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGGGTACCGAACCCACGTCTaGTCCAGGTCTTCCATGAAG +
Preference number: 5 (lower is better)
Translates to: TTAYTGRWGLGGARLHPGYRTHV*SRSSMK
Trigger: CTTCATGGAAGACCTGGACAAGACGTGGGTTCGGTA...CCCAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGCGCTCGGGCCCTGGGAGTGCTGGTTCTGTACAAGGTGGCGGGCCGGTCACGCTGTGTCTTTTTGGTTTaGCAAAGCGCCGCGTCCACC +
Preference number: 5 (lower is better)
Translates to: RARALGVLVLYKVAGRSRCVFLV*QSAAST
Trigger: GGTGGACGCGGCGCTTTGCAAAACCAAAAAGACACA...GCGTGACCGGCCCGCCACCTTGTACAGAACCAGCACTCCCAGGGCCCGAGCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACGAGGGATCTGAGAGGTaGAGCGGGCCCGTGATATCA +
Preference number: 5 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDEGSER*SGPVIS
Trigger: TGATATCACGGGCCCGCTCAACCTCTCAGATCCCTC...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAAGGTGCAGGGCAGGGTaGAAGACAGTCCCGAGCCAG +
Preference number: 5 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLRCRAG*KTVPSQ
Trigger: CTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCT...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGAGGTGCAGGGCAGGGTaGAAGACAGTCCCGAGCCAG +
Preference number: 5 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGRCRAG*KTVPSQ
Trigger: CTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCT...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS TCA 90 bp TTACTCTTGGACTCACGCTCCTCCAGCAGCGTCTCCAGGCGTTTCTaGGCCGCCCGGCCCTCGTGGTCGTCGCTGACCAGCAGGATGATG +
Preference number: 5 (lower is better)
Translates to: LLLDSRSSSSVSRRF*AARPSWSSLTSRMM
Trigger: CATCATCCTGCTGGTCAGCGACGACCACGAGGGCCGGGCGGCTCAGAAACGCCTGGAGACGCTGCTGGAGGAGCGTGAGTCCAAGAGTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371553.7
ENST00000371555.8
ENST00000371560.4
ENST00000675064.1
CDS GCA 90 bp TGCCGCTTGTTGGCCTGGTTCACGGCCTCGCGGAACATCTGCTCGTaGTTCCGCGTGCTCAGCACCGCGCCAATGTTGACGATCTTGGGG +
Preference number: 5 (lower is better)
Translates to: CRLLAWFTASRNICS*FRVLSTAPMLTILG
Trigger: CCCCAAGATCGTCAACATTGGCGCGGTGCTGAGCACGCGGAAGCACGAGCAGATGTTCCGCGAGGCCGTGAACCAGGCCAACAAGCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS CCA 90 bp GGGCCTCCAGCTCTTTCGCCTCCATCAGCAGGGCCGTCACGTTCTTaGTCCCTGGGTCAAACTGCAGCACCTTCTCTGCCTTGGGTCCGC +
Preference number: 5 (lower is better)
Translates to: GPPALSPPSAGPSRS*SLGQTAAPSLPWVR
Trigger: GCGGACCCAAGGCAGAGAAGGTGCTGCAGTTTGACCCAGGGACCAAGAACGTGACGGCCCTGCTGATGGAGGCGAAAGAGCTGGAGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371553.7
ENST00000371555.8
ENST00000371560.4
ENST00000675064.1
CDS CCA 90 bp TGTAAGGCCCCGTGGGCAGCTCTAAGCAACAACCCTACCTTGGGCTaGGGAGATTCCTGCCTTCTAGTCCGAGGAGCCCTGGCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: CKAPWAALSNNPTLG*GDSCLLVRGALAGP
Trigger: GGGGCCAGCCAGGGCTCCTCGGACTAGAAGGCAGGAATCTCCCCAGCCCAAGGTAGGGTTGTTGCTTAGAGCTGCCCACGGGGCCTTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS-3UTR CAA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGAGCACCGCGCCAATGTaGACGATCTTGGGGTCGCAC +
Preference number: 5 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGSTAPM*TILGSH
Trigger: GTGCGACCCCAAGATCGTCAACATTGGCGCGGTGCT...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CCAGGTGGGCCGTGGCTGCCCTTGCTGGTGGCAAATTCTCATGGATACAACCTGCAGGAGCCGTGCCGCTaGTTGGCCTGGTTCACGGCC +
Preference number: 5 (lower is better)
Translates to: PGGPWLPLLVANSHGYNLQEPCR*LAWFTA
Trigger: GGCCGTGAACCAGGCCAACAAGCGGCACGGCTCCTG...CAGGTTGTATCCATGAGAATTTGCCACCAGCAAGGGCAGCCACGGCCCACCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp TTCCGCCACACGTTAACGGCGGCAAAGGCCAGCTGCATCTGCTTCCGGCGAGCATGGATGGCGTTGGGCTaGTGCGTGACGGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: FRHTLTAAKASCICFRRAWMALG*CVTEVA
Trigger: TGCCACCTCCGTCACGCACAAGCCCAACGCCATCCA...TGCTCGCCGGAAGCAGATGCAGCTGGCCTTTGCCGCCGTTAACGTGTGGCGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp GAGGGGCTCAGCCCTCTCGAGTCTGGAGGAGGCGGCCCGAGGCGGCGGGAGGCGGTTGTCATAGGACAGTaGGTCGAGGTTTTCATAGTT +
Preference number: 5 (lower is better)
Translates to: EGLSPLESGGGGPRRREAVVIGQ*VEVFIV
Trigger: AACTATGAAAACCTCGACCAACTGTCCTATGACAAC...CGCCTCCCGCCGCCTCGGGCCGCCTCCTCCAGACTCGAGAGGGCTGAGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371555.8
ENST00000371560.4
CDS-3UTR CAA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCACCCCATCCGCATACTaGGAAGACATCAGCACTCTC +
Preference number: 5 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPTPSAY*EDISTL
Trigger: GAGAGTGCTGATGTCTTCCAAGTATGCGGATGGGGT...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCACGGTCCCCATCCTCATaGAACTCCACGCGACCAGTC +
Preference number: 5 (lower is better)
Translates to: RPSRAAGPISVLGRANWARSPSS*NSTRPV
Trigger: GACTGGTCGCGTGGAGTTCAATGAGGATGGGGACCG...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTCGGTCCCCATCCTCATaGAACTCCACGCGACCAGTC +
Preference number: 5 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPRSPSS*NSTRPV
Trigger: GACTGGTCGCGTGGAGTTCAATGAGGATGGGGACCG...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCGGTCCCCATCCTCATaGAACTCCACGCGACCAGTC +
Preference number: 5 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGRSPSS*NSTRPV
Trigger: GACTGGTCGCGTGGAGTTCAATGAGGATGGGGACCG...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGATTGTAGATGCCCACTaGCACCAGCTTGCGGTTCTG +
Preference number: 5 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLIVDAH*HQLAVL
Trigger: CAGAACCGCAAGCTGGTGCAAGTGGGCATCTACAAT...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTACTGTGAACTCCTCCTaGCATGTCCCATCACTCAGC +
Preference number: 5 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSTVNSS*HVPSLS
Trigger: GCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGT...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCATCCTGTGTGCCGAACTaGCCATCTGCCACCAGGTGC +
Preference number: 5 (lower is better)
Translates to: RPSRAAGPISVLGRANWASCVPN*PSATRC
Trigger: GCACCTGGTGGCAGATGGCAAGTTCGGCACACAGGA...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGTCCTGTGTGCCGAACTaGCCATCTGCCACCAGGTGC +
Preference number: 5 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGSCVPN*PSATRC
Trigger: GCACCTGGTGGCAGATGGCAAGTTCGGCACACAGGA...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGTTCCACTCCTTCTTGTaGCTGTTGTTCACCCGCTCC +
Preference number: 5 (lower is better)
Translates to: SPLHTPGGGGWAVRACTLFHSFL*LLFTRS
Trigger: GGAGCGGGTGAACAACAGCAACAAGAAGGAGTGGAA...CAGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGTACTGCGCGCGCTCGTaGTTTATGGTTAGCGGCGCC +
Preference number: 5 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGYCARS*FMVSGA
Trigger: GGCGCCGCTAACCATAAACAACGAGCGCGCGCAGTA...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTGTCAGGCCCTGGTACTaGAAGGGCTTGGAAAACTCG +
Preference number: 5 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPVRPWY*KGLENS
Trigger: CGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGAC...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACCGGGGAATCTCCTTCTaGACCAGAATAGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDRGISF*TRIVRP
Trigger: GGGCCTGACTATTCTGGTCAAGAAGGAGATTCCCCG...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GTTGGGCCCGGTGCAGATCACCTTCTTGACTGGGTCGCCGTTGACTGTGAACTCTCCCCGATGCCGGAGTaGAGCAGGACGCCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: VGPGADHLLDWVAVDCELSPMPE*SRTPQE
Trigger: CTCCTGGGGCGTCCTGCTCAACTCCGGCATCGGGGA...GAGTTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCACCGGGCCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp CGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTTGAGCGGGCCCTACCGAACCCACGTCTaGTCCAGGTCTTCCATGAAG +
Preference number: 5 (lower is better)
Translates to: RGPHTTVLTEGSERLSGPYRTHV*SRSSMK
Trigger: CTTCATGGAAGACCTGGACAAGACGTGGGTTCGGTA...GGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGAGGACCTACGCCTCTaGAAGCTGGAAGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPEDLRL*KLEARV
Trigger: CACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCTC...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371561.8
CDS-3UTR CAA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAGACTCGTTCTTGCCGTaGATGAGCTGCAGCCCGAGG +
Preference number: 5 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLDSFLP*MSCSPR
Trigger: CCTCGGGCTGCAGCTCATCAACGGCAAGAACGAGTC...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCAGACTCGTTCTTGCCGTaGATGAGCTGCAGCCCGAGG +
Preference number: 5 (lower is better)
Translates to: RPSRAAGPISVLGRANWADSFLP*MSCSPR
Trigger: CCTCGGGCTGCAGCTCATCAACGGCAAGAACGAGTC...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTACCGGTGCTCGTGTCTTaGGAGGACCTACGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLPVLVS*EDLRLL
Trigger: CAAGAGGCGTAGGTCCTCCAAAGACACGAGCACCGG...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371546.8
ENST00000371561.8
CDS TCA 90 bp AGGACAGAGCCCAGACAGGCCTCACCTTGCAGGCATGTGTGGTCTTaGGCTCTGCCAGTGTGCTTGCAGGTGGGCCCCTGTGGACAGTGG +
Preference number: 5 (lower is better)
Translates to: RTEPRQASPCRHVWS*ALPVCLQVGPCGQW
Trigger: CCACTGTCCACAGGGGCCCACCTGCAAGCACACTGGCAGAGCTCAAGACCACACATGCCTGCAAGGTGAGGCCTGTCTGGGCTCTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS GCA 90 bp GACCAGCCACACGTACCCGGAGCCCGTCATGTTCAGCATCGCGGCTaGGCGGTATACAGTGGCAGCATCGTCCTCGCTGGCAGAAAGGAT +
Preference number: 5 (lower is better)
Translates to: DQPHVPGARHVQHRG*AVYSGSIVLAGRKD
Trigger: ATCCTTTCTGCCAGCGAGGACGATGCTGCCACTGTATACCGCGCAGCCGCGATGCTGAACATGACGGGCTCCGGGTACGTGTGGCTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675295.1
CDS GCA 90 bp TGGGCAGCTCTAAGCAACAACCCTACCTTGGGCTGGGGAGATTCCTaGCTTCTAGTCCGAGGAGCCCTGGCTGGCCCCACCCTGCGTTCT +
Preference number: 5 (lower is better)
Translates to: WAALSNNPTLGWGDS*LLVRGALAGPTLRS
Trigger: AGAACGCAGGGTGGGGCCAGCCAGGGCTCCTCGGACTAGAAGGCAGGAATCTCCCCAGCCCAAGGTAGGGTTGTTGCTTAGAGCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 90 bp CTGAGGGAGGTCTGTGGGGCCCCCACCTTCAGTCTGGTGGACATCTaGTACCCTCGAGGCTTCTCTGTCTCTCCGCCTGGCCAGATGATC +
Preference number: 5 (lower is better)
Translates to: LREVCGAPTFSLVDI*YPRGFSVSPPGQMI
Trigger: GATCATCTGGCCAGGCGGAGAGACAGAGAAGCCTCGAGGGTACCAGATGTCCACCAGACTGAAGGTGGGGGCCCCACAGACCTCCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS-3UTR CAA 90 bp CCTCAGCCGCTCCGGTCCGCACCTTGGTCCAGCAGGGGCTGCCCGCCAGGCAGCGTTGTCATAGGACAGTaGGTCGAGGTTTTCATAGTT +
Preference number: 5 (lower is better)
Translates to: PQPLRSAPWSSRGCPPGSVVIGQ*VEVFIV
Trigger: AACTATGAAAACCTCGACCAACTGTCCTATGACAAC...GCTGCCTGGCGGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGCGGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371555.8
ENST00000371560.4
CDS-3UTR CAA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTAGCACCTTCTCTGCCTaGGGTCCGCGCTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPSTFSA*GPRLLS
Trigger: TGACAACAAGCGCGGACCCAAGGCAGAGAAGGTGCT...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371555.8
ENST00000371560.4
CDS-3UTR CAA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGAGCACCTTCTCTGCCTaGGGTCCGCGCTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGSTFSA*GPRLLS
Trigger: TGACAACAAGCGCGGACCCAAGGCAGAGAAGGTGCT...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371555.8
ENST00000371560.4
CDS-3UTR CAA 90 bp TCGCTGTTCACCTTGAACCGGCCGAAGGGGCTGAAGCGGTCCAGCAGGTACAGCTGGGCCGACTCGTTCTaGCCGTTGATGAGCGTCTGG +
Preference number: 5 (lower is better)
Translates to: SLFTLNRPKGLKRSSRYSWADSF*PLMSVW
Trigger: CCAGACGCTCATCAACGGCAAGAACGAGTCGGCCCA...GCTGTACCTGCTGGACCGCTTCAGCCCCTTCGGCCGGTTCAAGGTGAACAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACACCCCATCCGCATACTaGGAAGACATCAGCACTCTC +
Preference number: 5 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDTPSAY*EDISTL
Trigger: GAGAGTGCTGATGTCTTCCAAGTATGCGGATGGGGT...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCACCCACTTGCACCAGCTaGCGGTTCTGCAGGTTCATG +
Preference number: 5 (lower is better)
Translates to: RPSRAAGPISVLGRANWAPTCTS*RFCRFM
Trigger: CATGAACCTGCAGAACCGCAAGCTGGTGCAAGTGGG...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTCCCACTTGCACCAGCTaGCGGTTCTGCAGGTTCATG +
Preference number: 5 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPPTCTS*RFCRFM
Trigger: CATGAACCTGCAGAACCGCAAGCTGGTGCAAGTGGG...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GCGCGCTCGTTGTTTATGGTTAGCGGCGCCACGATCATGTCTGCCTGCCCGCTGTCACTCAGCGTGGGCTaGACGTACACGAAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: ARSLFMVSGATIMSACPLSLSVG*TYTKGS
Trigger: GGAGCCCTTCGTGTACGTCAAGCCCACGCTGAGTGA...CAGCGGGCAGGCAGACATGATCGTGGCGCCGCTAACCATAAACAACGAGCGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp TCCTATGGAATGGGTACCGGCGGGCGACTCTGGAGACAGAGGGGCCAGGCGGAGATGGTCCGTGCCAGCTaGATGAGCAGGTCGATGCAA +
Preference number: 5 (lower is better)
Translates to: SYGMGTGGRLWRQRGQAEMVRAS*MSRSMQ
Trigger: TTGCATCGACCTGCTCATCAAGCTGGCACGGACCAT...CTCCGCCTGGCCCCTCTGTCTCCAGAGTCGCCCGCCGGTACCCATTCCATAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACTTCCACTCCTTCTTGTaGCTGTTGTTCACCCGCTCC +
Preference number: 5 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDFHSFL*LLFTRS
Trigger: GGAGCGGGTGAACAACAGCAACAAGAAGGAGTGGAA...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTATTCCAGGGGCTGTCTTaGCGCATGCCTATGCCGAAG +
Preference number: 5 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLFQGLS*RMPMPK
Trigger: CTTCGGCATAGGCATGCGCAAAGACAGCCCCTGGAA...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTTTCCAGGGGCTGTCTTaGCGCATGCCTATGCCGAAG +
Preference number: 5 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPFQGLS*RMPMPK
Trigger: CTTCGGCATAGGCATGCGCAAAGACAGCCCCTGGAA...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp AGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGCACCATTCTCGTGGGACTaGAGGATGGACAGGGAGACG +
Preference number: 5 (lower is better)
Translates to: RPSRAAGPISVLGRANWAPFSWD*RMDRET
Trigger: CGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATGG...TGCCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp ATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGCACCCTTACCGAACCCACGTCTaGTCCAGGTCTTCCATGAAG +
Preference number: 5 (lower is better)
Translates to: ITTAYTGRWGLGGARLHPYRTHV*SRSSMK
Trigger: CTTCATGGAAGACCTGGACAAGACGTGGGTTCGGTA...AGGGTGCAGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGGCACCCAGAGAAAGAGAAGAGACGGAGTGAACCGGAACTCGACCGCGGGCCAGGGCCGTGGCTGCCCTaGCTGGTGGCAAATTCTCAT +
Preference number: 5 (lower is better)
Translates to: RHPEKEKRRSEPELDRGPGPWLP*LVANSH
Trigger: ATGAGAATTTGCCACCAGCAAGGGCAGCCACGGCCC...TGGCCCGCGGTCGAGTTCCGGTTCACTCCGTCTCTTCTCTTTCTCTGGGTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp GTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCGAGCCAGCGTCCGGGGACTGTGTCTTTTTGGTTTaGCAAAGCGCCGCGTCCACC +
Preference number: 5 (lower is better)
Translates to: VPKVQGRVEDSPEPASGDCVFLV*QSAAST
Trigger: GGTGGACGCGGCGCTTTGCAAAACCAAAAAGACACA...GTCCCCGGACGCTGGCTCGGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS TCA 90 bp ATCTGGATGGCGTTGGGCTTGTGCGTGACGGAGGTGGCATTGAGCTaGATCTTCCAGGAGCCGTGCCGCTTGTTGGCCTGGTTCACGGCC +
Preference number: 5 (lower is better)
Translates to: IWMALGLCVTEVALS*IFQEPCRLLAWFTA
Trigger: GGCCGTGAACCAGGCCAACAAGCGGCACGGCTCCTGGAAGATTCAGCTCAATGCCACCTCCGTCACGCACAAGCCCAACGCCATCCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS GCA 90 bp GGGCCTGACCTGTCTCCAGGTGGGCCTGGACTACCCCTGACACTTTaGTTCTCCAGACATGGGCAGCAGGGTTGGGTGGATTGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: GPDLSPGGPGLPLTL*FSRHGQQGWVDCLS
Trigger: ACTCAGGCAATCCACCCAACCCTGCTGCCCATGTCTGGAGAAGCAAAGTGTCAGGGGTAGTCCAGGCCCACCTGGAGACAGGTCAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CCA 90 bp GGAAGCTCAGGTGGATGCTCTTGTCCGAGTAGATGGACATGCGGGTaGTCAGCCCCAGCACGGGTATGCGGTAGAAGCCGGCTGTGTAGG +
Preference number: 5 (lower is better)
Translates to: GSSGGCSCPSRWTCG*SAPARVCGRSRLCR
Trigger: CCTACACAGCCGGCTTCTACCGCATACCCGTGCTGGGGCTGACCACCCGCATGTCCATCTACTCGGACAAGAGCATCCACCTGAGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS CCA 90 bp GGGCCTCCAGCTCTTTCGCCTCCATCAGCAGGGCCGTCACGTTCTTaGTCCCTGGGTCAAACTGCAGCACCTTCTCTGCCTTGGACTCAC +
Preference number: 5 (lower is better)
Translates to: GPPALSPPSAGPSRS*SLGQTAAPSLPWTH
Trigger: GTGAGTCCAAGGCAGAGAAGGTGCTGCAGTTTGACCCAGGGACCAAGAACGTGACGGCCCTGCTGATGGAGGCGAAAGAGCTGGAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371550.8
ENST00000371559.8
ENST00000371561.8
ENST00000471122.5
CDS CCA 90 bp GCCCTGGGACTGAGAGTGTCGCCGGCTCTTTCCCATATGCAGGGCTaGAGGGCTGGGCTGTGTTCCTCCGGGTGTTTCACTGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: ALGLRVSPALSHMQG*RAGLCSSGCFTAVL
Trigger: CAAAACAGCAGTGAAACACCCGGAGGAACACAGCCCAGCCCTCCAGCCCTGCATATGGGAAAGAGCCGGCGACACTCTCAGTCCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 90 bp AGATGGGCATGCTGGGTGGGCCAGTCGGCCTCTGCTGTGGGACTTTaGCCTCCACTCCAAGGAGCTCAGCATGTGAGAGGAGGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: RWACWVGQSASAVGL*PPLQGAQHVRGGSF
Trigger: AAAGGACCCTCCTCTCACATGCTGAGCTCCTTGGAGTGGAGGCCAAAGTCCCACAGCAGAGGCCGACTGGCCCACCCAGCATGCCCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CCA 90 bp CCTTGCCTTTGGTGGTCTGTGATGCTACCAGGACTGGAGTGTGTGTaGAGTGGGGGTAGTGTGGCTCTGCCCGGGGAGGAATGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: PCLWWSVMLPGLECV*SGGSVALPGEEWPG
Trigger: TCCTGGCCATTCCTCCCCGGGCAGAGCCACACTACCCCCACTCCACACACACTCCAGTCCTGGTAGCATCACAGACCACCAAAGGCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS-3UTR CAA 90 bp CGGCACCCAGAGAAAGAGAAGAGACGGAGTGAACCGGAACTCGACCGCGGGCCAGGAGTGAAGTGGTCGTaGGGGGTAGGTGGATGGCTA +
Preference number: 5 (lower is better)
Translates to: RHPEKEKRRSEPELDRGPGVKWS*GVGGWL
Trigger: TAGCCATCCACCTACCCCCAACGACCACTTCACTCC...TGGCCCGCGGTCGAGTTCCGGTTCACTCCGTCTCTTCTCTTTCTCTGGGTGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp ACGGACGGGAGGCCCAGGGTGGGCAGTCTCTGGGGCGGGTGGGCTTCCCTCAGGGTTGTCATAGGACAGTaGGTCGAGGTTTTCATAGTT +
Preference number: 5 (lower is better)
Translates to: TDGRPRVGSLWGGWASLRVVIGQ*VEVFIV
Trigger: AACTATGAAAACCTCGACCAACTGTCCTATGACAAC...CCTGAGGGAAGCCCACCCGCCCCAGAGACTGCCCACCCTGGGCCTCCCGTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371555.8
ENST00000371560.4
CDS-3UTR CAA 90 bp GCGCGCTCGTTGTTTATGGTTAGCGGCGCCACGATCATGTCTGCCTGCCCGCTGCCCACTTGCACCAGCTaGCGGTTCTGCAGGTTCATG +
Preference number: 5 (lower is better)
Translates to: ARSLFMVSGATIMSACPLPTCTS*RFCRFM
Trigger: CATGAACCTGCAGAACCGCAAGCTGGTGCAAGTGGG...CAGCGGGCAGGCAGACATGATCGTGGCGCCGCTAACCATAAACAACGAGCGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTGTGCAGATCACCTTCTaGACTGGGTCGCCGTTGACT +
Preference number: 5 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPVQITF*TGSPLT
Trigger: AGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCAC...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAGTGCAGATCACCTTCTaGACTGGGTCGCCGTTGACT +
Preference number: 5 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLVQITF*TGSPLT
Trigger: AGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCAC...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGATGGTCCGTGCCAGCTaGATGAGCAGGTCGATGCAA +
Preference number: 5 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGMVRAS*MSRSMQ
Trigger: TTGCATCGACCTGCTCATCAAGCTGGCACGGACCAT...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTCCCTGGTACTTGAAGGGCTaGGAAAACTCGATGTACTGC +
Preference number: 5 (lower is better)
Translates to: GGWRSPVPKVQGRVEDSPWYLKG*ENSMYC
Trigger: GCAGTACATCGAGTTTTCCAAGCCCTTCAAGTACCA...GGGACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GCGGGCGGGTGGCGCTCTCCCGTGCCCAAGGTGCAGGGCAGGGTTGAAGACAGTTGGTACTTGAAGGGCTaGGAAAACTCGATGTACTGC +
Preference number: 5 (lower is better)
Translates to: AGGWRSPVPKVQGRVEDSWYLKG*ENSMYC
Trigger: GCAGTACATCGAGTTTTCCAAGCCCTTCAAGTACCA...ACTGTCTTCAACCCTGCCCTGCACCTTGGGCACGGGAGAGCGCCACCCGCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTAAGGCATGCAGCTTGTaGTCTCTCACGGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPKACSL*SLTAWM
Trigger: CATCCAGGCCGTGAGAGACAACAAGCTGCATGCCTT...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAAAGGCATGCAGCTTGTaGTCTCTCACGGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLKACSL*SLTAWM
Trigger: CATCCAGGCCGTGAGAGACAACAAGCTGCATGCCTT...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp AACCACATGGCCGAGGACAGGGTCAGTGCGTCCTCCTCCTCCTCCTCGCTGTTCCCATTCTCGTGGGACTaGAGGATGGACAGGGAGACG +
Preference number: 5 (lower is better)
Translates to: NHMAEDRVSASSSSSSLFPFSWD*RMDRET
Trigger: CGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATGG...GAACAGCGAGGAGGAGGAGGAGGACGCACTGACCCTGTCCTCGGCCATGTGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp GGGAATCTCCTTCTTGACCAGAATAGTCAGGCCCTGGTACTTGAAGGGCTTGGACCCTCGGCCCCGGCTTaGCAGTGGGCAGCCACCTGC +
Preference number: 5 (lower is better)
Translates to: GNLLLDQNSQALVLEGLGPSAPA*QWAATC
Trigger: GCAGGTGGCTGCCCACTGCAAAGCCGGGGCCGAGGG...TCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCTGGTCAAGAAGGAGATTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS TCA 90 bp GAGGGTCATTTGATGGACCGTGGAAATGGTGGTCTGCCCTGGGACTaGGAGTGTCGCCGGCTCTTTCCCATATGCAGGGCTGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: EGHLMDRGNGGLPWD*ECRRLFPICRAGGL
Trigger: CAGCCCTCCAGCCCTGCATATGGGAAAGAGCCGGCGACACTCTCAGTCCCAGGGCAGACCACCATTTCCACGGTCCATCAAATGACCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 90 bp CAGCTCTTTCGCCTCCATCAGCAGGGCCGTCACGTTCTTGGTCCCTaGGTCAAACTGCAGCACCTTCTCTGCCTTGGGTCCGCGCTTGTT +
Preference number: 5 (lower is better)
Translates to: QLFRLHQQGRHVLGP*VKLQHLLCLGSALV
Trigger: AACAAGCGCGGACCCAAGGCAGAGAAGGTGCTGCAGTTTGACCCAGGGACCAAGAACGTGACGGCCCTGCTGATGGAGGCGAAAGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371553.7
ENST00000371555.8
ENST00000371560.4
ENST00000675064.1
CDS CCA 90 bp CAGCTCTTTCGCCTCCATCAGCAGGGCCGTCACGTTCTTGGTCCCTaGGTCAAACTGCAGCACCTTCTCTGCCTTGGACTCACGCTCCTC +
Preference number: 5 (lower is better)
Translates to: QLFRLHQQGRHVLGP*VKLQHLLCLGLTLL
Trigger: GAGGAGCGTGAGTCCAAGGCAGAGAAGGTGCTGCAGTTTGACCCAGGGACCAAGAACGTGACGGCCCTGCTGATGGAGGCGAAAGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371550.8
ENST00000371559.8
ENST00000371561.8
ENST00000471122.5
CDS CCA 90 bp ACTGAGAGTGTCGCCGGCTCTTTCCCATATGCAGGGCTGGAGGGCTaGGCTGTGTTCCTCCGGGTGTTTCACTGCTGTTTTGCTCCGCTC +
Preference number: 5 (lower is better)
Translates to: TESVAGSFPYAGLEG*AVFLRVFHCCFAPL
Trigger: GAGCGGAGCAAAACAGCAGTGAAACACCCGGAGGAACACAGCCCAGCCCTCCAGCCCTGCATATGGGAAAGAGCCGGCGACACTCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 90 bp GGGGGCTGCATCTGTCTCCGTGCTAGAGGGTCATTTGATGGACCGTaGAAATGGTGGTCTGCCCTGGGACTGAGAGTGTCGCCGGCTCTT +
Preference number: 5 (lower is better)
Translates to: GGCICLRARGSFDGP*KWWSALGLRVSPAL
Trigger: AAGAGCCGGCGACACTCTCAGTCCCAGGGCAGACCACCATTTCCACGGTCCATCAAATGACCCTCTAGCACGGAGACAGATGCAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 90 bp GGTTATGACAAGGACCTGGAGACCTGGTGGGACTCTGGAGGCCTTTaGGGGGTCTTCCCTCACCCCCGTCTGTCAGACCTTTCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: GYDKDLETWWDSGGL*GVFPHPRLSDLSLQ
Trigger: CTGCAGAGAAAGGTCTGACAGACGGGGGTGAGGGAAGACCCCCCAAAGGCCTCCAGAGTCCCACCAGGTCTCCAGGTCCTTGTCATAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS-3UTR CAA 90 bp CTGTCGGCTTCATCTCAGGACACAGGCTCCAGGACGGCACCCAGAGAAAGAGAACCAATGTTGACGATCTaGGGGTCGCACGCGGCACGG +
Preference number: 5 (lower is better)
Translates to: LSASSQDTGSRTAPREREPMLTI*GSHAAR
Trigger: CCGTGCCGCGTGCGACCCCAAGATCGTCAACATTGG...TTCTCTTTCTCTGGGTGCCGTCCTGGAGCCTGTGTCCTGAGATGAAGCCGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp ATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCCCATTCCACTCCTTCAGCACCGCGCCAATGTaGACGATCTTGGGGTCGCAC +
Preference number: 5 (lower is better)
Translates to: IMSACPLSSSPIIPFHSFSTAPM*TILGSH
Trigger: GTGCGACCCCAAGATCGTCAACATTGGCGCGGTGCT...GAAGGAGTGGAATGGGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp CTGTCGGCTTCATCTCAGGACACAGGCTCCAGGACGGCACCCAGAGAAAGAGAAGCCATCTGGATGGCGTaGGGCTTGTGCGTGACGGAG +
Preference number: 5 (lower is better)
Translates to: LSASSQDTGSRTAPREREAIWMA*GLCVTE
Trigger: CTCCGTCACGCACAAGCCCAACGCCATCCAGATGGC...TTCTCTTTCTCTGGGTGCCGTCCTGGAGCCTGTGTCCTGAGATGAAGCCGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp GCTCAGCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTGACTCGTTCTTGCCGTaGATGAGCGTCTGGGGCGTA +
Preference number: 5 (lower is better)
Translates to: AQLHLAPEVDIHGALLHRDSFLP*MSVWGV
Trigger: TACGCCCCAGACGCTCATCAACGGCAAGAACGAGTC...ACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp CTTCCCTCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACCCCATCCGCATACTaGGAAGACATCAGCACTCTC +
Preference number: 5 (lower is better)
Translates to: LPSGLPEQQDPSVSLAGLTPSAY*EDISTL
Trigger: GAGAGTGCTGATGTCTTCCAAGTATGCGGATGGGGT...TAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGAGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTACCCCATCCGCATACTaGGAAGACATCAGCACTCTC +
Preference number: 5 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPTPSAY*EDISTL
Trigger: GAGAGTGCTGATGTCTTCCAAGTATGCGGATGGGGT...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGATTGTAGATGCCCACTaGCACCAGCTTGCGGTTCTG +
Preference number: 5 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGIVDAH*HQLAVL
Trigger: CAGAACCGCAAGCTGGTGCAAGTGGGCATCTACAAT...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTACTGTGAACTCCTCCTaGCATGTCCCATCACTCAGC +
Preference number: 5 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPTVNSS*HVPSLS
Trigger: GCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGT...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp GCGCGCTCGTTGTTTATGGTTAGCGGCGCCACGATCATGTCTGCCTGCCCGCTGGTGCAGATCACCTTCTaGACTGGGTCGCCGTTGACT +
Preference number: 5 (lower is better)
Translates to: ARSLFMVSGATIMSACPLVQITF*TGSPLT
Trigger: AGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCAC...CAGCGGGCAGGCAGACATGATCGTGGCGCCGCTAACCATAAACAACGAGCGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp TTTAGGCATCACCACTGCATACACCGGGAGGTGGGGGTTGGGCGGTGCGCGCCTCCATTCCACTCCTTCTaGTTGCTGTTGTTCACCCGC +
Preference number: 5 (lower is better)
Translates to: FRHHHCIHREVGVGRCAPPFHSF*LLLFTR
Trigger: GCGGGTGAACAACAGCAACAAGAAGGAGTGGAATGG...AGGCGCGCACCGCCCAACCCCCACCTCCCGGTGTATGCAGTGGTGATGCCTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGCCACGATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCCCATTCCACGGGGAATCTCCTTCTaGACCAGAATAGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: RHDHVCLPAEQLAHHPIPRGISF*TRIVRP
Trigger: GGGCCTGACTATTCTGGTCAAGAAGGAGATTCCCCG...TGGAATGGGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGATCGTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp TGTGCCGAACTTGCCATCTGCCACCAGGTGCACCTCGTAGGTGAAGTTCATGGTCTCAGCCGAGGGTCGTaGATGCCCGTGATGCGCTCC +
Preference number: 5 (lower is better)
Translates to: CAELAICHQVHLVGEVHGLSRGS*MPVMRS
Trigger: GGAGCGCATCACGGGCATCAACGACCCTCGGCTGAG...ACCATGAACTTCACCTACGAGGTGCACCTGGTGGCAGATGGCAAGTTCGGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp GCTCAGCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTTTCCAGGGGCTGTCTTaGCGCATGCCTATGCCGAAG +
Preference number: 5 (lower is better)
Translates to: AQLHLAPEVDIHGALLHRFQGLS*RMPMPK
Trigger: CTTCGGCATAGGCATGCGCAAAGACAGCCCCTGGAA...ACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS GCA 90 bp TCATCTCAAACCACACGCTGGACTGGTGGGAGTAGGGCGGCACGGTaGGCAGGAAGCTCAGGTGGATGCTCTTGTCCGAGTAGATGGACA +
Preference number: 5 (lower is better)
Translates to: SSQTTRWTGGSRAAR*AGSSGGCSCPSRWT
Trigger: TGTCCATCTACTCGGACAAGAGCATCCACCTGAGCTTCCTGCGCACCGTGCCGCCCTACTCCCACCAGTCCAGCGTGTGGTTTGAGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS CCA 90 bp GCTGTTGCAATCCTTCAGTTGGGAAATCTGGCCCTCTCCCTGCTGTaGGCCTTTTCGCCTGGCACACCTGCACATCACTTCCCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: AVAILQLGNLALSLL*AFSPGTPAHHFPGP
Trigger: AGGCCCAGGGAAGTGATGTGCAGGTGTGCCAGGCGAAAAGGCCCACAGCAGGGAGAGGGCCAGATTTCCCAACTGAAGGATTGCAACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS-3UTR CAA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCGAGCCGTGCCGCTTGTaGGCCTGGTTCACGGCCTCG +
Preference number: 5 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPREPCRL*AWFTAS
Trigger: CGAGGCCGTGAACCAGGCCAACAAGCGGCACGGCTC...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCCAGGAGCCGTGCCGCTaGTTGGCCTGGTTCACGGCC +
Preference number: 5 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRQEPCR*LAWFTA
Trigger: GGCCGTGAACCAGGCCAACAAGCGGCACGGCTCCTG...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp ATCATGTCTGCCTGCCCGCTGAGCAGCTCGCCCATCATCCCATTCCACTCCTTCAGCACCTTCTCTGCCTaGGGTCCGCGCTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: IMSACPLSSSPIIPFHSFSTFSA*GPRLLS
Trigger: TGACAACAAGCGCGGACCCAAGGCAGAGAAGGTGCT...GAAGGAGTGGAATGGGATGATGGGCGAGCTGCTCAGCGGGCAGGCAGACATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp GAAGTTCATGGTCCGTGCCAGCTTGATGAGCAGGTCGATGCAAAAGCCGTAGCATTCCAGATGTTGGTGTaGCCCACGCAGCCCCGCGGC +
Preference number: 5 (lower is better)
Translates to: EVHGPCQLDEQVDAKAVAFQMLV*PTQPRG
Trigger: GCCGCGGGGCTGCGTGGGCAACACCAACATCTGGAA...TGCTACGGCTTTTGCATCGACCTGCTCATCAAGCTGGCACGGACCATGAACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp TCGCTGTTCACCTTGAACCGGCCGAAGGGGCTGAAGCGGTCCAGCAGGTACAGCACCCCATCCGCATACTaGGAAGACATCAGCACTCTC +
Preference number: 5 (lower is better)
Translates to: SLFTLNRPKGLKRSSRYSTPSAY*EDISTL
Trigger: GAGAGTGCTGATGTCTTCCAAGTATGCGGATGGGGT...GCTGTACCTGCTGGACCGCTTCAGCCCCTTCGGCCGGTTCAAGGTGAACAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp TCGCTGTTCACCTTGAACCGGCCGAAGGGGCTGAAGCGGTCCAGCAGGTACAGCACTGTGAACTCCTCCTaGCATGTCCCATCACTCAGC +
Preference number: 5 (lower is better)
Translates to: SLFTLNRPKGLKRSSRYSTVNSS*HVPSLS
Trigger: GCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGT...GCTGTACCTGCTGGACCGCTTCAGCCCCTTCGGCCGGTTCAAGGTGAACAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp CGGCACCCAGAGAAAGAGAAGAGACGGAGTGAACCGGAACTCGACCGCGGGCCATTCCACTCCTTCTTGTaGCTGTTGTTCACCCGCTCC +
Preference number: 5 (lower is better)
Translates to: RHPEKEKRRSEPELDRGPFHSFL*LLFTRS
Trigger: GGAGCGGGTGAACAACAGCAACAAGAAGGAGTGGAA...TGGCCCGCGGTCGAGTTCCGGTTCACTCCGTCTCTTCTCTTTCTCTGGGTGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp TCTGCGTGGAGGCCACTGACCCCCAAGGGGCACACACCAAGATTCAGGAAGGGGCCATTCCACTCCTTCTaGTTGCTGTTGTTCACCCGC +
Preference number: 5 (lower is better)
Translates to: SAWRPLTPKGHTPRFRKGPFHSF*LLLFTR
Trigger: GCGGGTGAACAACAGCAACAAGAAGGAGTGGAATGG...CCCCTTCCTGAATCTTGGTGTGTGCCCCTTGGGGGTCAGTGGCCTCCACGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp GCTCAGCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTGTCAGGCCCTGGTACTaGAAGGGCTTGGAAAACTCG +
Preference number: 5 (lower is better)
Translates to: AQLHLAPEVDIHGALLHRVRPWY*KGLENS
Trigger: CGAGTTTTCCAAGCCCTTCAAGTACCAGGGCCTGAC...ACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS TCA 90 bp CCACCCCAAGGTTGCTCTGTGGCACCGGACCTGTCCAGAGCAGCTTaGTTTCCCGGGTACCTAACTGATTTCCCCCTAAGCTACTGCTGC +
Preference number: 5 (lower is better)
Translates to: PPQGCSVAPDLSRAA*FPGYLTDFPLSYCC
Trigger: GCAGCAGTAGCTTAGGGGGAAATCAGTTAGGTACCCGGGAAATCAAGCTGCTCTGGACAGGTCCGGTGCCACAGAGCAACCTTGGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS TCA 90 bp GGCCCAGTGCCCCAAATGAGAGCATCTAGCAGAGGCTCCGCACACTaGACACAGCACAGCTTGTCCAGCAAGACCCAACACCACACGTGT +
Preference number: 5 (lower is better)
Translates to: GPVPQMRASSRGSAH*TQHSLSSKTQHHTC
Trigger: ACACGTGTGGTGTTGGGTCTTGCTGGACAAGCTGTGCTGTGTTCAGTGTGCGGAGCCTCTGCTAGATGCTCTCATTTGGGGCACTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS GCA 90 bp CTGCAGCTGTTGCAATCCTTCAGTTGGGAAATCTGGCCCTCTCCCTaGTGTGGGCCTTTTCGCCTGGCACACCTGCACATCACTTCCCTG +
Preference number: 5 (lower is better)
Translates to: LQLLQSFSWEIWPSP*CGPFRLAHLHITSL
Trigger: CAGGGAAGTGATGTGCAGGTGTGCCAGGCGAAAAGGCCCACAGCAGGGAGAGGGCCAGATTTCCCAACTGAAGGATTGCAACAGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS GCA 90 bp GCTGGAGGGCTGGGCTGTGTTCCTCCGGGTGTTTCACTGCTGTTTTaGTCCGCTCTGTTGGAGCCTAGCAGAGCTTTTAGGTCAGGGACA +
Preference number: 5 (lower is better)
Translates to: AGGLGCVPPGVSLLF*SALLEPSRAFRSGT
Trigger: TGTCCCTGACCTAAAAGCTCTGCTAGGCTCCAACAGAGCGGAGCAAAACAGCAGTGAAACACCCGGAGGAACACAGCCCAGCCCTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 90 bp TCTGGTGGACATCTGGTACCCTCGAGGCTTCTCTGTCTCTCCGCCTaGCCAGATGATCTTCCTGTCATTAGGGATGACCTGGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: SGGHLVPSRLLCLSA*PDDLPVIRDDLGVG
Trigger: TCCCACCCCCAGGTCATCCCTAATGACAGGAAGATCATCTGGCCAGGCGGAGAGACAGAGAAGCCTCGAGGGTACCAGATGTCCACCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485413.1
CDS CCA 90 bp CCTAAGCTACTGCTGCAGCTGTTGCAATCCTTCAGTTGGGAAATCTaGCCCTCTCCCTGCTGTGGGCCTTTTCGCCTGGCACACCTGCAC +
Preference number: 5 (lower is better)
Translates to: PKLLLQLLQSFSWEI*PSPCCGPFRLAHLH
Trigger: GTGCAGGTGTGCCAGGCGAAAAGGCCCACAGCAGGGAGAGGGCCAGATTTCCCAACTGAAGGATTGCAACAGCTGCAGCAGTAGCTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS-3UTR CAA 90 bp TTGACTGTGAACTCCTCCTTGCATGTCCCATCACTCAGCGTGGGCTTGACGTACCCGGTCTTCCAGATGTaGGTGTTGCCCACGCAGCCC +
Preference number: 5 (lower is better)
Translates to: LTVNSSLHVPSLSVGLTYPVFQM*VLPTQP
Trigger: GGGCTGCGTGGGCAACACCAACATCTGGAAGACCGG...GTACGTCAAGCCCACGCTGAGTGATGGGACATGCAAGGAGGAGTTCACAGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp TCAGGCCTTCCCGAGCAGCAGGACCCATCAGTGTCCTTGGCCGGGCTAACTGGGTGGTACTTGAAGGGCTaGGAAAACTCGATGTACTGC +
Preference number: 5 (lower is better)
Translates to: SGLPEQQDPSVSLAGLTGWYLKG*ENSMYC
Trigger: GCAGTACATCGAGTTTTCCAAGCCCTTCAAGTACCA...CCCAGTTAGCCCGGCCAAGGACACTGATGGGTCCTGCTGCTCGGGAAGGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
CDS-3UTR CAA 90 bp CGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCGCTCCGGTCCGCACCTaGGTCCAGCAGGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: RDISGMVLLQNRNTQTRRAPVRT*VQQGLP
Trigger: GGGCAGCCCCTGCTGGACCAAGGTGCGGACCGGAGC...GCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS GCA 90 bp CCCGGGTACCTAACTGATTTCCCCCTAAGCTACTGCTGCAGCTGTTaGAATCCTTCAGTTGGGAAATCTGGCCCTCTCCCTGCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: PGYLTDFPLSYCCSC*NPSVGKSGPLPAVG
Trigger: GCCCACAGCAGGGAGAGGGCCAGATTTCCCAACTGAAGGATTGCAACAGCTGCAGCAGTAGCTTAGGGGGAAATCAGTTAGGTACCCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS GCA 90 bp ACCCAACACCACACGTGTCATGGCACAGCATGCCCGCTATCAAAGTaGCCACCAGGGCCTGACAGACAAGCCCGTCTTCTTGACGCAATT +
Preference number: 5 (lower is better)
Translates to: TQHHTCHGTACPLSK*PPGPDRQARLLDAI
Trigger: AATTGCGTCAAGAAGACGGGCTTGTCTGTCAGGCCCTGGTGGGCACTTTGATAGCGGGCATGCTGTGCCATGACACGTGTGGTGTTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CCA 90 bp TGCATCTGTCTCCGTGCTAGAGGGTCATTTGATGGACCGTGGAAATaGTGGTCTGCCCTGGGACTGAGAGTGTCGCCGGCTCTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: CICLRARGSFDGPWK*WSALGLRVSPALSH
Trigger: ATGGGAAAGAGCCGGCGACACTCTCAGTCCCAGGGCAGACCACCATTTCCACGGTCCATCAAATGACCCTCTAGCACGGAGACAGATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 90 bp ACAACCTTCACTAAGGAGGAGCCAAAATATGACAGGCTGAAGGTCTaGGGTCAAGAAGGCCTGTGCCTGCCACTGCCCAGGGCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: TTFTKEEPKYDRLKV*GQEGLCLPLPRACL
Trigger: GAGGCAAGCCCTGGGCAGTGGCAGGCACAGGCCTTCTTGACCCCAGACCTTCAGCCTGTCATATTTTGGCTCCTCCTTAGTGAAGGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS-3UTR CAA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCTGGATGGCGTTGGGCTaGTGCGTGACGGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRWMALG*CVTEVA
Trigger: TGCCACCTCCGTCACGCACAAGCCCAACGCCATCCA...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp ATGAAGCCATTCTCGTGGGACTTGAGGATGGACAGGGAGACGTTCTGCTTCCAGCGGTCCCCATCCTCATaGAACTCCACGCGACCAGTC +
Preference number: 5 (lower is better)
Translates to: MKPFSWDLRMDRETFCFQRSPSS*NSTRPV
Trigger: GACTGGTCGCGTGGAGTTCAATGAGGATGGGGACCG...CTGGAAGCAGAACGTCTCCCTGTCCATCCTCAAGTCCCACGAGAATGGCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp CCAGGTGGGCCGTGGCTGCCCTTGCTGGTGGCAAATTCTCATGGATACAACCTGATTGTAGATGCCCACTaGCACCAGCTTGCGGTTCTG +
Preference number: 5 (lower is better)
Translates to: PGGPWLPLLVANSHGYNLIVDAH*HQLAVL
Trigger: CAGAACCGCAAGCTGGTGCAAGTGGGCATCTACAAT...CAGGTTGTATCCATGAGAATTTGCCACCAGCAAGGGCAGCCACGGCCCACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp CTGTCGGCTTCATCTCAGGACACAGGCTCCAGGACGGCACCCAGAGAAAGAGAAAAGGCATGCAGCTTGTaGTCTCTCACGGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: LSASSQDTGSRTAPREREKACSL*SLTAWM
Trigger: CATCCAGGCCGTGAGAGACAACAAGCTGCATGCCTT...TTCTCTTTCTCTGGGTGCCGTCCTGGAGCCTGTGTCCTGAGATGAAGCCGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp GCTCAGCTCCACCTGGCGCCGGAAGTAGATATCCACGGAGCTCTGCTTCACCGTAGGGCAAAATGCATCTaGGACTCACGTGCCATACAC +
Preference number: 5 (lower is better)
Translates to: AQLHLAPEVDIHGALLHRRAKCI*DSRAIH
Trigger: GTGTATGGCACGTGAGTCCAAGATGCATTTTGCCCT...ACGGTGAAGCAGAGCTCCGTGGATATCTACTTCCGGCGCCAGGTGGAGCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS TCA 90 bp CACAAAACAGAAGTGCTCCCAGTAGCACTGGCCCAGTGCCCCAAATaGGAGCATCTAGCAGAGGCTCCGCACACTGAACACAGCACAGCT +
Preference number: 5 (lower is better)
Translates to: HKTEVLPVALAQCPK*EHLAEAPHTEHSTA
Trigger: AGCTGTGCTGTGTTCAGTGTGCGGAGCCTCTGCTAGATGCTCTCATTTGGGGCACTGGGCCAGTGCTACTGGGAGCACTTCTGTTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CCA 90 bp ATCTGTCTCCGTGCTAGAGGGTCATTTGATGGACCGTGGAAATGGTaGTCTGCCCTGGGACTGAGAGTGTCGCCGGCTCTTTCCCATATG +
Preference number: 5 (lower is better)
Translates to: ICLRARGSFDGPWKW*SALGLRVSPALSHM
Trigger: CATATGGGAAAGAGCCGGCGACACTCTCAGTCCCAGGGCAGACCACCATTTCCACGGTCCATCAAATGACCCTCTAGCACGGAGACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS-3UTR CAA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCAGCACCGCGCCAATGTaGACGATCTTGGGGTCGCAC +
Preference number: 5 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRSTAPM*TILGSH
Trigger: GTGCGACCCCAAGATCGTCAACATTGGCGCGGTGCT...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp GGGAATCTCCTTCTTGACCAGAATAGTCAGGCCCTGGTACTTGAAGGGCTTGGATACTGCGCGCGCTCGTaGTTTATGGTTAGCGGCGCC +
Preference number: 5 (lower is better)
Translates to: GNLLLDQNSQALVLEGLGYCARS*FMVSGA
Trigger: GGCGCCGCTAACCATAAACAACGAGCGCGCGCAGTA...TCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCTGGTCAAGAAGGAGATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACTCAGCCGAGGGTCGTaGATGCCCGTGATGCGCTCC +
Preference number: 5 (lower is better)
Translates to: RLSGPVISVGWYCCKIEILSRGS*MPVMRS
Trigger: GGAGCGCATCACGGGCATCAACGACCCTCGGCTGAG...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp GGTGCTCTCCCCCTTACCGTGTCTTTGGAGGACCTACGCCTCTTGAAGCTGGAATACCGAACCCACGTCTaGTCCAGGTCTTCCATGAAG +
Preference number: 5 (lower is better)
Translates to: GALPLTVSLEDLRLLKLEYRTHV*SRSSMK
Trigger: CTTCATGGAAGACCTGGACAAGACGTGGGTTCGGTA...TTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGGTAAGGGGGAGAGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCTGGGCCGACTCGTTCTaGCCGTTGATGAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRWADSF*PLMSCS
Trigger: GCTGCAGCTCATCAACGGCAAGAACGAGTCGGCCCA...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp ATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGTTAGCCCCACGCGGAGTGAAGTGGTCGTaGGGGGTAGGTGGATGGCTA +
Preference number: 5 (lower is better)
Translates to: MVLLQNRNTQTRRPLAPRGVKWS*GVGGWL
Trigger: TAGCCATCCACCTACCCCCAACGACCACTTCACTCC...GCGTGGGGCTAACGGGCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp GGGAATCTCCTTCTTGACCAGAATAGTCAGGCCCTGGTACTTGAAGGGCTTGGAGACATCAGCACTCTCTaGAAGAGCGGCCCGGTCTTC +
Preference number: 5 (lower is better)
Translates to: GNLLLDQNSQALVLEGLGDISTL*KSGPVF
Trigger: GAAGACCGGGCCGCTCTTCAAGAGAGTGCTGATGTC...TCCAAGCCCTTCAAGTACCAGGGCCTGACTATTCTGGTCAAGAAGGAGATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp CGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCCGGTCTTCCAGATGTaGGTGTTGCCCACGCAGCCC +
Preference number: 5 (lower is better)
Translates to: RDISGMVLLQNRNTQTRRPVFQM*VLPTQP
Trigger: GGGCTGCGTGGGCAACACCAACATCTGGAAGACCGG...GCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp GTGATAGCCCTAAATGTGGCTTTCTTTTTAGGGTCAGGCTCTGCTCTACCACTCTCCTGTGTGCCGAACTaGCCATCTGCCACCAGGTGC +
Preference number: 5 (lower is better)
Translates to: VIALNVAFFLGSGSALPLSCVPN*PSATRC
Trigger: GCACCTGGTGGCAGATGGCAAGTTCGGCACACAGGA...GAGTGGTAGAGCAGAGCCTGACCCTAAAAAGAAAGCCACATTTAGGGCTATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp GTGATAGCCCTAAATGTGGCTTTCTTTTTAGGGTCAGGCTCTGCTCTACCACTCGAGGACCTACGCCTCTaGAAGCTGGAAGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: VIALNVAFFLGSGSALPLEDLRL*KLEARV
Trigger: CACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCTC...GAGTGGTAGAGCAGAGCCTGACCCTAAAAAGAAAGCCACATTTAGGGCTATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATAGACTCGTTCTTGCCGTaGATGAGCTGCAGCCCGAGG +
Preference number: 5 (lower is better)
Translates to: RLSGPVISVGWYCCKIEIDSFLP*MSCSPR
Trigger: CCTCGGGCTGCAGCTCATCAACGGCAAGAACGAGTC...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS TCA 90 bp AGCCCTTCGGTGTTTGCTCTACATAACGATGCTATTGGATGTCAGTaGCACAAAACAGAAGTGCTCCCAGTAGCACTGGCCCAGTGCCCC +
Preference number: 5 (lower is better)
Translates to: SPSVFALHNDAIGCQ*HKTEVLPVALAQCP
Trigger: GGGGCACTGGGCCAGTGCTACTGGGAGCACTTCTGTTTTGTGTCACTGACATCCAATAGCATCGTTATGTAGAGCAAACACCGAAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS-3UTR CAA 90 bp CGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCAGCACCGCGCCAATGTaGACGATCTTGGGGTCGCAC +
Preference number: 5 (lower is better)
Translates to: RDISGMVLLQNRNTQTRRSTAPM*TILGSH
Trigger: GTGCGACCCCAAGATCGTCAACATTGGCGCGGTGCT...GCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp GTTGGGCCCGGTGCAGATCACCTTCTTGACTGGGTCGCCGTTGACTGTGAACTCGTTGTCATAGGACAGTaGGTCGAGGTTTTCATAGTT +
Preference number: 5 (lower is better)
Translates to: VGPGADHLLDWVAVDCELVVIGQ*VEVFIV
Trigger: AACTATGAAAACCTCGACCAACTGTCCTATGACAAC...GAGTTCACAGTCAACGGCGACCCAGTCAAGAAGGTGATCTGCACCGGGCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp CGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCCGGTCCCCATCCTCATaGAACTCCACGCGACCAGTC +
Preference number: 5 (lower is better)
Translates to: RDISGMVLLQNRNTQTRRRSPSS*NSTRPV
Trigger: GACTGGTCGCGTGGAGTTCAATGAGGATGGGGACCG...GCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp TGTGCCGAACTTGCCATCTGCCACCAGGTGCACCTCGTAGGTGAAGTTCATGGTTGGTACTTGAAGGGCTaGGAAAACTCGATGTACTGC +
Preference number: 5 (lower is better)
Translates to: CAELAICHQVHLVGEVHGWYLKG*ENSMYC
Trigger: GCAGTACATCGAGTTTTCCAAGCCCTTCAAGTACCA...ACCATGAACTTCACCTACGAGGTGCACCTGGTGGCAGATGGCAAGTTCGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS-3UTR CAA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATAGAGGGATCTGAGAGGTaGAGCGGGCCCGTGATATCA +
Preference number: 5 (lower is better)
Translates to: RLSGPVISVGWYCCKIEIEGSER*SGPVIS
Trigger: TGATATCACGGGCCCGCTCAACCTCTCAGATCCCTC...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp AGGTTGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACCATTCCACTCCTTCTaGTTGCTGTTGTTCACCCGC +
Preference number: 5 (lower is better)
Translates to: RLSGPVISVGWYCCKIEIPFHSF*LLLFTR
Trigger: GCGGGTGAACAACAGCAACAAGAAGGAGTGGAATGG...TATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS-3UTR CAA 90 bp CGTGATATCAGTGGGATGGTACTGCTGCAAAATAGAAATACACAGACAAGGCGCTTCCACTCCTTCTTGTaGCTGTTGTTCACCCGCTCC +
Preference number: 5 (lower is better)
Translates to: RDISGMVLLQNRNTQTRRFHSFL*LLFTRS
Trigger: GGAGCGGGTGAACAACAGCAACAAGAAGGAGTGGAA...GCGCCTTGTCTGTGTATTTCTATTTTGCAGCAGTACCATCCCACTGATATCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371555.8
ENST00000371561.8
CDS GCA 72 bp GGCGGGTCGGTGATGTTCTCCTTCTCGAGGAGCTCGTaGACGGCCTGGGCCACCACGCCCACGGCGTCGCTG +
Preference number: 6 (lower is better)
Translates to: GGSVMFSFSRSS*TAWATTPTASL
Trigger: CAGCGACGCCGTGGGCGTGGTGGCCCAGGCCGTGCACGAGCTCCTCGAGAAGGAGAACATCACCGACCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675295.1
ENST00000676396.1
CDS TCA 72 bp GCTCGTGCTTCCGCGTGCTCAGCACCGCGCCAATGTTaGCGATCTTGGGGTCGCACGCGGCACGGGCGACGG +
Preference number: 6 (lower is better)
Translates to: ARASACSAPRQC*RSWGRTRHGRR
Trigger: CCGTCGCCCGTGCCGCGTGCGACCCCAAGATCGTCAACATTGGCGCGGTGCTGAGCACGCGGAAGCACGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS TCA 72 bp GACTCACGCTCCTCCAGCAGCGTCTCCAGGCGTTTCTaGGCCGCCCGGCCCTCGTGGTCGTCGCTGACCAGC +
Preference number: 6 (lower is better)
Translates to: DSRSSSSVSRRF*AARPSWSSLTS
Trigger: GCTGGTCAGCGACGACCACGAGGGCCGGGCGGCTCAGAAACGCCTGGAGACGCTGCTGGAGGAGCGTGAGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675064.1
CDS GCA 72 bp CTCCTAGAGCGAAGCCTGCAGACCTCGCAGAGGCGCTaGGGCCCAGAACCCAGGAGCCTCCCAGGCCTCCGT +
Preference number: 6 (lower is better)
Translates to: LLERSLQTSQRR*GPEPRSLPGLR
Trigger: ACGGAGGCCTGGGAGGCTCCTGGGTTCTGGGCCGCAGCGCCTCTGCGAGGTCTGCAGGCTTCGCTCTAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS GCA 72 bp AGTCCGAGGAGCCCTGGCTGGCCCCACCCTGCGTTCTaGCCTGGTGAGGGGGCTGCATCTGTCTCCGTGCTA +
Preference number: 6 (lower is better)
Translates to: SPRSPGWPHPAF*PGEGAASVSVL
Trigger: TAGCACGGAGACAGATGCAGCCCCCTCACCAGGGCAGAACGCAGGGTGGGGCCAGCCAGGGCTCCTCGGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 72 bp ACGGCCTGGGCCACCACGCCCACGGCGTCGCTGATGTaGGCCGACTCGTTCTTGCCGTTGATGAGCGTCTGG +
Preference number: 6 (lower is better)
Translates to: TAWATTPTASLM*ADSFLPLMSVW
Trigger: CCAGACGCTCATCAACGGCAAGAACGAGTCGGCCCACATCAGCGACGCCGTGGGCGTGGTGGCCCAGGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS CCA 72 bp GTGATGTTCTCCTTCTCGAGGAGCTCGTGCACGGCCTaGGCCACCACGCCCACGGCGTCGCTGATGTGGGCC +
Preference number: 6 (lower is better)
Translates to: VMFSFSRSSCTA*ATTPTASLMWA
Trigger: GGCCCACATCAGCGACGCCGTGGGCGTGGTGGCCCAGGCCGTGCACGAGCTCCTCGAGAAGGAGAACATCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675295.1
ENST00000676396.1
CDS CCA 72 bp ACGGCCTGGGCCACCACGCCCACGGCGTCGCTGATGTaGGCCGACTCGTTCTTGCCGTTGATGAGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: TAWATTPTASLM*ADSFLPLMSCS
Trigger: GCTGCAGCTCATCAACGGCAAGAACGAGTCGGCCCACATCAGCGACGCCGTGGGCGTGGTGGCCCAGGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675295.1
ENST00000676396.1
CDS CAA 72 bp TTCCGCGTGCTCAGCACCGCGCCAATGTTGACGATCTaGGGGTCGCACGCGGCACGGGCGACGGAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: FRVLSTAPMLTI*GSHAARATEQE
Trigger: CTCCTGCTCCGTCGCCCGTGCCGCGTGCGACCCCAAGATCGTCAACATTGGCGCGGTGCTGAGCACGCGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS CAA 72 bp TGCTCGTGCTTCCGCGTGCTCAGCACCGCGCCAATGTaGACGATCTTGGGGTCGCACGCGGCACGGGCGACG +
Preference number: 6 (lower is better)
Translates to: CSCFRVLSTAPM*TILGSHAARAT
Trigger: CGTCGCCCGTGCCGCGTGCGACCCCAAGATCGTCAACATTGGCGCGGTGCTGAGCACGCGGAAGCACGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS CAA 72 bp ACGCCCACGGCGTCGCTGATGTGGGCCGACTCGTTCTaGCCGTTGATGAGCGTCTGGGGCGTAGCGCAGGGC +
Preference number: 6 (lower is better)
Translates to: TPTASLMWADSF*PLMSVWGVAQG
Trigger: GCCCTGCGCTACGCCCCAGACGCTCATCAACGGCAAGAACGAGTCGGCCCACATCAGCGACGCCGTGGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350902.9
CDS CAA 90 bp TGCTCGTGCTTCCGCGTGCTCAGCACCGCGCCAATGTTGACGATCTaGGGGTCGCACGCGGCACGGGCGACGGAGCAGGAGAACAGCAGG +
Preference number: 6 (lower is better)
Translates to: CSCFRVLSTAPMLTI*GSHAARATEQENSR
Trigger: CCTGCTGTTCTCCTGCTCCGTCGCCCGTGCCGCGTGCGACCCCAAGATCGTCAACATTGGCGCGGTGCTGAGCACGCGGAAGCACGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS CAA 90 bp CGGAACATCTGCTCGTGCTTCCGCGTGCTCAGCACCGCGCCAATGTaGACGATCTTGGGGTCGCACGCGGCACGGGCGACGGAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: RNICSCFRVLSTAPM*TILGSHAARATEQE
Trigger: CTCCTGCTCCGTCGCCCGTGCCGCGTGCGACCCCAAGATCGTCAACATTGGCGCGGTGCTGAGCACGCGGAAGCACGAGCAGATGTTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS TCA 72 bp TGTTGGTGTTGCCCACGCAGCCCCGCGGCGGGTCGGTaGTGTTCTCCTTCTCGAGGAGCTCGTGCACGGCCT +
Preference number: 6 (lower is better)
Translates to: CWCCPRSPAAGR*CSPSRGARARP
Trigger: AGGCCGTGCACGAGCTCCTCGAGAAGGAGAACATCACCGACCCGCCGCGGGGCTGCGTGGGCAACACCAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675295.1
ENST00000676396.1
CDS GCA 72 bp CGGCCAGAGATGAGAGGCGGCTTTCCCCCTGGAGTCTaGATAAGCAGCTGCCTTCGCCCAGCCACCCAGGCC +
Preference number: 6 (lower is better)
Translates to: RPEMRGGFPPGV*ISSCLRPATQA
Trigger: GGCCTGGGTGGCTGGGCGAAGGCAGCTGCTTATGCAGACTCCAGGGGGAAAGCCGCCTCTCATCTCTGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CAA 72 bp AGCACTCTCTTGAAGAGCGGCCCGGTCTTCCAGATGTaGGTGTTGCCCACGCAGCCCCGCGGCGGGTCGGTG +
Preference number: 6 (lower is better)
Translates to: STLLKSGPVFQM*VLPTQPRGGSV
Trigger: CACCGACCCGCCGCGGGGCTGCGTGGGCAACACCAACATCTGGAAGACCGGGCCGCTCTTCAAGAGAGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675295.1
ENST00000676396.1
CDS CAA 72 bp ACGGCGTCGCTGATGTGGGCCGACTCGTTCTTGCCGTaGATGAGCTGCAGCCCGAGGATGCCGTCTGGGGCG +
Preference number: 6 (lower is better)
Translates to: TASLMWADSFLP*MSCSPRMPSGA
Trigger: CGCCCCAGACGGCATCCTCGGGCTGCAGCTCATCAACGGCAAGAACGAGTCGGCCCACATCAGCGACGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675295.1
ENST00000676396.1
CDS GCA 72 bp CGCTTGTTGGCCTGGTTCACGGCCTCGCGGAACATCTaGTCGTGCTTCCGCGTGCTCAGCACCGCGCCAATG +
Preference number: 6 (lower is better)
Translates to: RLLAWFTASRNI*SCFRVLSTAPM
Trigger: CATTGGCGCGGTGCTGAGCACGCGGAAGCACGAGCAGATGTTCCGCGAGGCCGTGAACCAGGCCAACAAGCG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS GCA 72 bp CACGTACCCGGAGCCCGTCATGTTCAGCATCGCGGCTaGGCGGTATACAGTGGCAGCATCGTCCTCGCTGGC +
Preference number: 6 (lower is better)
Translates to: HVPGARHVQHRG*AVYSGSIVLAG
Trigger: GCCAGCGAGGACGATGCTGCCACTGTATACCGCGCAGCCGCGATGCTGAACATGACGGGCTCCGGGTACGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675295.1
CDS CCA 72 bp TGCCTCTCTGCACTCCTGGGAGATGGGCATGCTGGGTaGGCCAGTCGGCCTCTGCTGTGGGACTTTGGCCTC +
Preference number: 6 (lower is better)
Translates to: CLSALLGDGHAG*ASRPLLWDFGL
Trigger: GAGGCCAAAGTCCCACAGCAGAGGCCGACTGGCCCACCCAGCATGCCCATCTCCCAGGAGTGCAGAGAGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CAA 72 bp CTCTTGAAGAGCGGCCCGGTCTTCCAGATGTTGGTGTaGCCCACGCAGCCCCGCGGCGGGTCGGTGATGTTC +
Preference number: 6 (lower is better)
Translates to: LLKSGPVFQMLV*PTQPRGGSVMF
Trigger: GAACATCACCGACCCGCCGCGGGGCTGCGTGGGCAACACCAACATCTGGAAGACCGGGCCGCTCTTCAAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675295.1
ENST00000676396.1
CDS CAA 72 bp ACGCCCACGGCGTCGCTGATGTGGGCCGACTCGTTCTaGCCGTTGATGAGCTGCAGCCCGAGGATGCCGTCT +
Preference number: 6 (lower is better)
Translates to: TPTASLMWADSF*PLMSCSPRMPS
Trigger: AGACGGCATCCTCGGGCTGCAGCTCATCAACGGCAAGAACGAGTCGGCCCACATCAGCGACGCCGTGGGCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675295.1
ENST00000676396.1
CDS TCA 72 bp CCAGGCCTGGGCCTTGTTTGCACAGGTTTGCCCCCTTaGGTTGCGGGGCTTCCCAAGGGCAGGGTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: PGLGLVCTGLPP*VAGLPKGRVSS
Trigger: GGAAGAGACCCTGCCCTTGGGAAGCCCCGCAACTCAAGGGGGCAAACCTGTGCAAACAAGGCCCAGGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS GCA 72 bp TTGGCCTGGTTCACGGCCTCGCGGAACATCTGCTCGTaGTTCCGCGTGCTCAGCACCGCGCCAATGTTGACG +
Preference number: 6 (lower is better)
Translates to: LAWFTASRNICS*FRVLSTAPMLT
Trigger: CGTCAACATTGGCGCGGTGCTGAGCACGCGGAAGCACGAGCAGATGTTCCGCGAGGCCGTGAACCAGGCCAA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS GCA 72 bp TGGGAGATGGGCATGCTGGGTGGGCCAGTCGGCCTCTaGTGTGGGACTTTGGCCTCCACTCCAAGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: WEMGMLGGPVGL*CGTLASTPRSS
Trigger: TGAGCTCCTTGGAGTGGAGGCCAAAGTCCCACAGCAGAGGCCGACTGGCCCACCCAGCATGCCCATCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS GCA 72 bp CACGTACCCGGAGCCCGTCATGTTCAGCATCGCGGCTaGGCGGTATACAGTGGCAGCATCGTCCTCGCTGTG +
Preference number: 6 (lower is better)
Translates to: HVPGARHVQHRG*AVYSGSIVLAV
Trigger: CACAGCGAGGACGATGCTGCCACTGTATACCGCGCAGCCGCGATGCTGAACATGACGGGCTCCGGGTACGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CCA 72 bp GTGGACAGTGGAGCAGGGGACCTGGTCCTCTGGGGCTaGGGCCTCTCTGGTTATGACAAGGACCTGGAGACC +
Preference number: 6 (lower is better)
Translates to: VDSGAGDLVLWG*GLSGYDKDLET
Trigger: GGTCTCCAGGTCCTTGTCATAACCAGAGAGGCCCCAGCCCCAGAGGACCAGGTCCCCTGCTCCACTGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CCA 72 bp CCGTCATGTTCAGCATCGCGGCTGCGCGGTATACAGTaGCAGCATCGTCCTCGCTGTGGGGCAGACGGGGAT +
Preference number: 6 (lower is better)
Translates to: PSCSASRLRGIQ*QHRPRCGADGD
Trigger: ATCCCCGTCTGCCCCACAGCGAGGACGATGCTGCCACTGTATACCGCGCAGCCGCGATGCTGAACATGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CAA 72 bp CCCAGGCCTGGGCCTTGTTTGCACAGGTTTGCCCCCTaGAGTTGCGGGGCTTCCCAAGGGCAGGGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: PRPGPCLHRFAP*SCGASQGQGLF
Trigger: GAAGAGACCCTGCCCTTGGGAAGCCCCGCAACTCAAGGGGGCAAACCTGTGCAAACAAGGCCCAGGCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CAA 90 bp CTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTaGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCTGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: LRGPHTTVLTEGSER*SGPVISVGWYCCRF
Trigger: GAACCTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371559.8
ENST00000371560.4
CDS CAA 90 bp ATCAGCACTCTCTTGAAGAGCGGCCCGGTCTTCCAGATGTTGGTGTaGCCCACGCAGCCCCGCGGCGGGTCGGTGATGTTCTCCTTCTCG +
Preference number: 6 (lower is better)
Translates to: ISTLLKSGPVFQMLV*PTQPRGGSVMFSFS
Trigger: CGAGAAGGAGAACATCACCGACCCGCCGCGGGGCTGCGTGGGCAACACCAACATCTGGAAGACCGGGCCGCTCTTCAAGAGAGTGCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675295.1
ENST00000676396.1
CDS CAA 90 bp GAAGACATCAGCACTCTCTTGAAGAGCGGCCCGGTCTTCCAGATGTaGGTGTTGCCCACGCAGCCCCGCGGCGGGTCGGTGATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: EDISTLLKSGPVFQM*VLPTQPRGGSVMFS
Trigger: GGAGAACATCACCGACCCGCCGCGGGGCTGCGTGGGCAACACCAACATCTGGAAGACCGGGCCGCTCTTCAAGAGAGTGCTGATGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675295.1
ENST00000676396.1
CDS CAA 90 bp CTCCGGGGGCCTCACACCACGGTGCTGACCGAGGGATCTGAGAGGTaGAGCGGGCCCGTGATATCAGTGGGATGGTACTGCGTGTCTTTG +
Preference number: 6 (lower is better)
Translates to: LRGPHTTVLTEGSER*SGPVISVGWYCVSL
Trigger: CAAAGACACGCAGTACCATCCCACTGATATCACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGTGAGGCCCCCGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371553.7
CDS CAA 90 bp GAGATGGGCATGCTGGGTGGGCCAGTCGGCCTCTGCTGTGGGACTTaGGCCTCCACTCCAAGGAGCTCAGCATGTGAGAGGAGGGTCCTT +
Preference number: 6 (lower is better)
Translates to: EMGMLGGPVGLCCGT*ASTPRSSACERRVL
Trigger: AAGGACCCTCCTCTCACATGCTGAGCTCCTTGGAGTGGAGGCCAAAGTCCCACAGCAGAGGCCGACTGGCCCACCCAGCATGCCCATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS TCA 72 bp GCGTTGGGCTTGTGCGTGACGGAGGTGGCATTGAGCTaGATCTTCCAGGAGCCGTGCCGCTTGTTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: ALGLCVTEVALS*IFQEPCRLLAW
Trigger: CCAGGCCAACAAGCGGCACGGCTCCTGGAAGATTCAGCTCAATGCCACCTCCGTCACGCACAAGCCCAACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS TCA 72 bp CCCAGACAGGCCTCACCTTGCAGGCATGTGTGGTCTTaGGCTCTGCCAGTGTGCTTGCAGGTGGGCCCCTGT +
Preference number: 6 (lower is better)
Translates to: PRQASPCRHVWS*ALPVCLQVGPC
Trigger: ACAGGGGCCCACCTGCAAGCACACTGGCAGAGCTCAAGACCACACATGCCTGCAAGGTGAGGCCTGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS GCA 72 bp CTAAGCAACAACCCTACCTTGGGCTGGGGAGATTCCTaGCTTCTAGTCCGAGGAGCCCTGGCTGGCCCCACC +
Preference number: 6 (lower is better)
Translates to: LSNNPTLGWGDS*LLVRGALAGPT
Trigger: GGTGGGGCCAGCCAGGGCTCCTCGGACTAGAAGGCAGGAATCTCCCCAGCCCAAGGTAGGGTTGTTGCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 72 bp CTGGAGATGAGGTCCTCGCACACCGACAGAGCCATCTaGATGGCGTTGGGCTTGTGCGTGACGGAGGTGGCA +
Preference number: 6 (lower is better)
Translates to: LEMRSSHTDRAI*MALGLCVTEVA
Trigger: TGCCACCTCCGTCACGCACAAGCCCAACGCCATCCAGATGGCTCTGTCGGTGTGCGAGGACCTCATCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS CCA 72 bp GGTGGATGCTCTTGTCCGAGTAGATGGACATGCGGGTaGTCAGCCCCAGCACGGGTATGCGGTAGAAGCCGG +
Preference number: 6 (lower is better)
Translates to: GGCSCPSRWTCG*SAPARVCGRSR
Trigger: CCGGCTTCTACCGCATACCCGTGCTGGGGCTGACCACCCGCATGTCCATCTACTCGGACAAGAGCATCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS CCA 72 bp CGCCTCCATCAGCAGGGCCGTCACGTTCTTGGTCCCTaGGTCAAACTGCAGCACCTTCTCTGCCTTGGGTCC +
Preference number: 6 (lower is better)
Translates to: RLHQQGRHVLGP*VKLQHLLCLGS
Trigger: GGACCCAAGGCAGAGAAGGTGCTGCAGTTTGACCCAGGGACCAAGAACGTGACGGCCCTGCTGATGGAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371553.7
ENST00000371555.8
ENST00000371560.4
ENST00000675064.1
CDS CCA 72 bp TGCTGGGTGGGCCAGTCGGCCTCTGCTGTGGGACTTTaGCCTCCACTCCAAGGAGCTCAGCATGTGAGAGGA +
Preference number: 6 (lower is better)
Translates to: CWVGQSASAVGL*PPLQGAQHVRG
Trigger: TCCTCTCACATGCTGAGCTCCTTGGAGTGGAGGCCAAAGTCCCACAGCAGAGGCCGACTGGCCCACCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CAA 72 bp ATGCTGGGTGGGCCAGTCGGCCTCTGCTGTGGGACTTaGGCCTCCACTCCAAGGAGCTCAGCATGTGAGAGG +
Preference number: 6 (lower is better)
Translates to: MLGGPVGLCCGT*ASTPRSSACER
Trigger: CCTCTCACATGCTGAGCTCCTTGGAGTGGAGGCCAAAGTCCCACAGCAGAGGCCGACTGGCCCACCCAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CAA 90 bp CCGCGTCCACCCCCGGTGCTCGTGTCTTTGGAGGACCTACGCCTCTaGAAGCTGGAAGCCAGGGTGGAGGTGATAGCCCTAAATGTGGCT +
Preference number: 6 (lower is better)
Translates to: PRPPPVLVSLEDLRL*KLEARVEVIALNVA
Trigger: AGCCACATTTAGGGCTATCACCTCCACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGAGCACCGGGGGTGGACGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371546.8
ENST00000371561.8
ENST00000473811.1
CDS CAA 90 bp CTCCCTCTCAATAGCGCGTCGCGGCAGCACTGTGTCTTTTTGGTTTaGCAAAGCGCCGCGTCCACCCCCGGTGCTCTGCAGGTTCTTCCG +
Preference number: 6 (lower is better)
Translates to: LPLNSASRQHCVFLV*QSAASTPGALQVLP
Trigger: CGGAAGAACCTGCAGAGCACCGGGGGTGGACGCGGCGCTTTGCAAAACCAAAAAGACACAGTGCTGCCGCGACGCGCTATTGAGAGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371550.8
ENST00000371555.8
CDS CAA 90 bp GGAGCATGTAAGGCCCCGTGGGCAGCTCTAAGCAACAACCCTACCTaGGGCTGGGGAGATTCCTGCCTTCTAGTCCGAGGAGCCCTGGCT +
Preference number: 6 (lower is better)
Translates to: GACKAPWAALSNNPT*GWGDSCLLVRGALA
Trigger: AGCCAGGGCTCCTCGGACTAGAAGGCAGGAATCTCCCCAGCCCAAGGTAGGGTTGTTGCTTAGAGCTGCCCACGGGGCCTTACATGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 72 bp GCAGGAAGCTCAGGTGGATGCTCTTGTCCGAGTAGATaGACATGCGGGTGGTCAGCCCCAGCACGGGTATGC +
Preference number: 6 (lower is better)
Translates to: AGSSGGCSCPSR*TCGWSAPARVC
Trigger: GCATACCCGTGCTGGGGCTGACCACCCGCATGTCCATCTACTCGGACAAGAGCATCCACCTGAGCTTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS CCA 72 bp TCCAGCTGTAGACACGCATCATCTCAAACCACACGCTaGACTGGTGGGAGTAGGGCGGCACGGTGCGCAGGA +
Preference number: 6 (lower is better)
Translates to: SSCRHASSQTTR*TGGSRAARCAG
Trigger: TCCTGCGCACCGTGCCGCCCTACTCCCACCAGTCCAGCGTGTGGTTTGAGATGATGCGTGTCTACAGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS CCA 72 bp CGCCTCCATCAGCAGGGCCGTCACGTTCTTGGTCCCTaGGTCAAACTGCAGCACCTTCTCTGCCTTGGACTC +
Preference number: 6 (lower is better)
Translates to: RLHQQGRHVLGP*VKLQHLLCLGL
Trigger: GAGTCCAAGGCAGAGAAGGTGCTGCAGTTTGACCCAGGGACCAAGAACGTGACGGCCCTGCTGATGGAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371550.8
ENST00000371559.8
ENST00000371561.8
ENST00000471122.5
CDS CCA 72 bp CCGTGGGCAGCTCTAAGCAACAACCCTACCTTGGGCTaGGGAGATTCCTGCCTTCTAGTCCGAGGAGCCCTG +
Preference number: 6 (lower is better)
Translates to: PWAALSNNPTLG*GDSCLLVRGAL
Trigger: CAGGGCTCCTCGGACTAGAAGGCAGGAATCTCCCCAGCCCAAGGTAGGGTTGTTGCTTAGAGCTGCCCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 72 bp CTCCAGGTTGGTGAGATATTGGTGGATCCAGCGTCCTaGGGACGGCCAGAGATGAGAGGCGGCTTTCCCCCT +
Preference number: 6 (lower is better)
Translates to: LQVGEILVDPAS*GRPEMRGGFPP
Trigger: AGGGGGAAAGCCGCCTCTCATCTCTGGCCGTCCCCAGGACGCTGGATCCACCAATATCTCACCAACCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CCA 72 bp TGGTGGTCTGTGATGCTACCAGGACTGGAGTGTGTGTaGAGTGGGGGTAGTGTGGCTCTGCCCGGGGAGGAA +
Preference number: 6 (lower is better)
Translates to: WWSVMLPGLECV*SGGSVALPGEE
Trigger: TTCCTCCCCGGGCAGAGCCACACTACCCCCACTCCACACACACTCCAGTCCTGGTAGCATCACAGACCACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CAA 72 bp CCCCCGGTGCTCGTGTCTTTGGAGGACCTACGCCTCTaGAAGCTGGAAGCCAGGGTGGAGGTGATAGCCCTA +
Preference number: 6 (lower is better)
Translates to: PPVLVSLEDLRL*KLEARVEVIAL
Trigger: TAGGGCTATCACCTCCACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGAGCACCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371546.8
ENST00000371561.8
ENST00000473811.1
CDS CAA 72 bp AATAGCGCGTCGCGGCAGCACTGTGTCTTTTTGGTTTaGCAAAGCGCCGCGTCCACCCCCGGTGCTCGTGTC +
Preference number: 6 (lower is better)
Translates to: NSASRQHCVFLV*QSAASTPGARV
Trigger: GACACGAGCACCGGGGGTGGACGCGGCGCTTTGCAAAACCAAAAAGACACAGTGCTGCCGCGACGCGCTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371546.8
ENST00000371561.8
ENST00000473811.1
CDS CAA 72 bp AATAGCGCGTCGCGGCAGCACTGTGTCTTTTTGGTTTaGCAAAGCGCCGCGTCCACCCCCGGTGCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: NSASRQHCVFLV*QSAASTPGALQ
Trigger: CTGCAGAGCACCGGGGGTGGACGCGGCGCTTTGCAAAACCAAAAAGACACAGTGCTGCCGCGACGCGCTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371550.8
ENST00000371555.8
CDS CAA 72 bp CCTGTCTCCAGGTGGGCCTGGACTACCCCTGACACTTaGCTTCTCCAGACATGGGCAGCAGGGTTGGGTGGA +
Preference number: 6 (lower is better)
Translates to: PVSRWAWTTPDT*LLQTWAAGLGG
Trigger: TCCACCCAACCCTGCTGCCCATGTCTGGAGAAGCAAAGTGTCAGGGGTAGTCCAGGCCCACCTGGAGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CAA 90 bp CTCCCTCTCAATAGCGCGTCGCGGCAGCACTGTGTCTTTTTGGTTTaGCAAAGCGCCGCGTCCACCCCCGGTGCTCGTGTCTTTGGAGGA +
Preference number: 6 (lower is better)
Translates to: LPLNSASRQHCVFLV*QSAASTPGARVFGG
Trigger: TCCTCCAAAGACACGAGCACCGGGGGTGGACGCGGCGCTTTGCAAAACCAAAAAGACACAGTGCTGCCGCGACGCGCTATTGAGAGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371546.8
ENST00000371561.8
ENST00000473811.1
CDS GCA 72 bp AGCTCAGGTGGATGCTCTTGTCCGAGTAGATGGACATaGGGGTGGTCAGCCCCAGCACGGGTATGCGGTAGA +
Preference number: 6 (lower is better)
Translates to: SSGGCSCPSRWT*GWSAPARVCGR
Trigger: TCTACCGCATACCCGTGCTGGGGCTGACCACCCGCATGTCCATCTACTCGGACAAGAGCATCCACCTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
CDS GCA 72 bp CCTGGGCCTTGTTTGCACAGGTTTGCCCCCTTGAGTTaGGGGGCTTCCCAAGGGCAGGGTCTCTTCCATATC +
Preference number: 6 (lower is better)
Translates to: PGPCLHRFAPLS*GASQGQGLFHI
Trigger: GATATGGAAGAGACCCTGCCCTTGGGAAGCCCCGCAACTCAAGGGGGCAAACCTGTGCAAACAAGGCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS GCA 72 bp CTGGAGGGCTGGGCTGTGTTCCTCCGGGTGTTTCACTaGTGTTTTGCTCCGCTCTGTTGGAGCCTAGCAGAG +
Preference number: 6 (lower is better)
Translates to: LEGWAVFLRVFH*CFAPLCWSLAE
Trigger: CTCTGCTAGGCTCCAACAGAGCGGAGCAAAACAGCAGTGAAACACCCGGAGGAACACAGCCCAGCCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS GCA 72 bp CTGTCTCCAGGTGGGCCTGGACTACCCCTGACACTTTaGTTCTCCAGACATGGGCAGCAGGGTTGGGTGGAT +
Preference number: 6 (lower is better)
Translates to: LSPGGPGLPLTL*FSRHGQQGWVD
Trigger: ATCCACCCAACCCTGCTGCCCATGTCTGGAGAAGCAAAGTGTCAGGGGTAGTCCAGGCCCACCTGGAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CCA 72 bp GCTCTTTCGCCTCCATCAGCAGGGCCGTCACGTTCTTaGTCCCTGGGTCAAACTGCAGCACCTTCTCTGCCT +
Preference number: 6 (lower is better)
Translates to: ALSPPSAGPSRS*SLGQTAAPSLP
Trigger: AGGCAGAGAAGGTGCTGCAGTTTGACCCAGGGACCAAGAACGTGACGGCCCTGCTGATGGAGGCGAAAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675064.1
CDS CCA 72 bp CTCCGTGCTAGAGGGTCATTTGATGGACCGTGGAAATaGTGGTCTGCCCTGGGACTGAGAGTGTCGCCGGCT +
Preference number: 6 (lower is better)
Translates to: LRARGSFDGPWK*WSALGLRVSPA
Trigger: AGCCGGCGACACTCTCAGTCCCAGGGCAGACCACCATTTCCACGGTCCATCAAATGACCCTCTAGCACGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CAA 72 bp AGCTCTTTCGCCTCCATCAGCAGGGCCGTCACGTTCTaGGTCCCTGGGTCAAACTGCAGCACCTTCTCTGCC +
Preference number: 6 (lower is better)
Translates to: SSFASISRAVTF*VPGSNCSTFSA
Trigger: GGCAGAGAAGGTGCTGCAGTTTGACCCAGGGACCAAGAACGTGACGGCCCTGCTGATGGAGGCGAAAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000675064.1
CDS CAA 72 bp GCCTGGGCCTTGTTTGCACAGGTTTGCCCCCTTGAGTaGCGGGGCTTCCCAAGGGCAGGGTCTCTTCCATAT +
Preference number: 6 (lower is better)
Translates to: AWALFAQVCPLE*RGFPRAGSLPY
Trigger: ATATGGAAGAGACCCTGCCCTTGGGAAGCCCCGCAACTCAAGGGGGCAAACCTGTGCAAACAAGGCCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CAA 72 bp GAGGGGGCTGCATCTGTCTCCGTGCTAGAGGGTCATTaGATGGACCGTGGAAATGGTGGTCTGCCCTGGGAC +
Preference number: 6 (lower is better)
Translates to: EGAASVSVLEGH*MDRGNGGLPWD
Trigger: GTCCCAGGGCAGACCACCATTTCCACGGTCCATCAAATGACCCTCTAGCACGGAGACAGATGCAGCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CAA 72 bp AAGGCCCCGTGGGCAGCTCTAAGCAACAACCCTACCTaGGGCTGGGGAGATTCCTGCCTTCTAGTCCGAGGA +
Preference number: 6 (lower is better)
Translates to: KAPWAALSNNPT*GWGDSCLLVRG
Trigger: TCCTCGGACTAGAAGGCAGGAATCTCCCCAGCCCAAGGTAGGGTTGTTGCTTAGAGCTGCCCACGGGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CAA 72 bp CCGAGGGGAAGCGGAGGCACATGGGACACACAAGAGTaGGTAAGTGGCAGAGTCAGGACCCGAGCTCCTAAG +
Preference number: 6 (lower is better)
Translates to: PRGSGGTWDTQE*VSGRVRTRAPK
Trigger: CTTAGGAGCTCGGGTCCTGACTCTGCCACTTACCAACTCTTGTGTGTCCCATGTGCCTCCGCTTCCCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CAA 90 bp ACCGAGAGAAGGTTGGTGGGCGTGTCGCCTGTGAGGTCCTTGCCTTaGGTGGTCTGTGATGCTACCAGGACTGGAGTGTGTGTGGAGTGG +
Preference number: 6 (lower is better)
Translates to: TERRLVGVSPVRSLP*VVCDATRTGVCVEW
Trigger: CCACTCCACACACACTCCAGTCCTGGTAGCATCACAGACCACCAAAGGCAAGGACCTCACAGGCGACACGCCCACCAACCTTCTCTCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CAA 90 bp CCCCTCATGACCCCCACCTACGTGGGTGCCATTGTAGATGCCCACTaGCACCAGCTTGCGGTTCTGCAGGTTCATGATGCTGTAGTTGGC +
Preference number: 6 (lower is better)
Translates to: PLMTPTYVGAIVDAH*HQLAVLQVHDAVVG
Trigger: GCCAACTACAGCATCATGAACCTGCAGAACCGCAAGCTGGTGCAAGTGGGCATCTACAATGGCACCCACGTAGGTGGGGGTCATGAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485413.1
CDS CAA 90 bp GGAATGACCGAGAGAAGGTTGGTGGGCGTGTCGCCTGTGAGGTCCTaGCCTTTGGTGGTCTGTGATGCTACCAGGACTGGAGTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: GMTERRLVGVSPVRS*PLVVCDATRTGVCV
Trigger: CACACACACTCCAGTCCTGGTAGCATCACAGACCACCAAAGGCAAGGACCTCACAGGCGACACGCCCACCAACCTTCTCTCGGTCATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS TCA 72 bp TTGATGGACCGTGGAAATGGTGGTCTGCCCTGGGACTaGGAGTGTCGCCGGCTCTTTCCCATATGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: LMDRGNGGLPWD*ECRRLFPICRA
Trigger: AGCCCTGCATATGGGAAAGAGCCGGCGACACTCTCAGTCCCAGGGCAGACCACCATTTCCACGGTCCATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS TCA 72 bp CCTGGGGCTTGCAGTTGGATGAGTGGAGTGGACAAGTaGCCTGTGAGCTTAAAGCCGAGTGCAGGGGGCGTA +
Preference number: 6 (lower is better)
Translates to: PGACSWMSGVDK*PVSLKPSAGGV
Trigger: TACGCCCCCTGCACTCGGCTTTAAGCTCACAGGTCACTTGTCCACTCCACTCATCCAACTGCAAGCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS TCA 72 bp GAAGTGCTCCCAGTAGCACTGGCCCAGTGCCCCAAATaGGAGCATCTAGCAGAGGCTCCGCACACTGAACAC +
Preference number: 6 (lower is better)
Translates to: EVLPVALAQCPK*EHLAEAPHTEH
Trigger: GTGTTCAGTGTGCGGAGCCTCTGCTAGATGCTCTCATTTGGGGCACTGGGCCAGTGCTACTGGGAGCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS GCA 72 bp CACACGTGTCATGGCACAGCATGCCCGCTATCAAAGTaGCCACCAGGGCCTGACAGACAAGCCCGTCTTCTT +
Preference number: 6 (lower is better)
Translates to: HTCHGTACPLSK*PPGPDRQARLL
Trigger: AAGAAGACGGGCTTGTCTGTCAGGCCCTGGTGGGCACTTTGATAGCGGGCATGCTGTGCCATGACACGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CCA 72 bp CAGATGATCTTCCTGTCATTAGGGATGACCTGGGGGTaGGAGTATGAGATGGAGGGTGGCCACGCAGGGGTC +
Preference number: 6 (lower is better)
Translates to: QMIFLSLGMTWG*EYEMEGGHAGV
Trigger: GACCCCTGCGTGGCCACCCTCCATCTCATACTCCCACCCCCAGGTCATCCCTAATGACAGGAAGATCATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485413.1
CDS CCA 72 bp CTCTTTCTATCCCTGCCTGATTGCCTTCCTATGGAATaGGTACCGGCGGGCGACTCTGCAGGTTCTTCCGCC +
Preference number: 6 (lower is better)
Translates to: LFLSLPDCLPME*VPAGDSAGSSA
Trigger: GGCGGAAGAACCTGCAGAGTCGCCCGCCGGTACCCATTCCATAGGAAGGCAATCAGGCAGGGATAGAAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675295.1
CDS CCA 72 bp CTGCTGCAGCTGTTGCAATCCTTCAGTTGGGAAATCTaGCCCTCTCCCTGCTGTGGGCCTTTTCGCCTGGCA +
Preference number: 6 (lower is better)
Translates to: LLQLLQSFSWEI*PSPCCGPFRLA
Trigger: TGCCAGGCGAAAAGGCCCACAGCAGGGAGAGGGCCAGATTTCCCAACTGAAGGATTGCAACAGCTGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 72 bp CGTGCTAGAGGGTCATTTGATGGACCGTGGAAATGGTaGTCTGCCCTGGGACTGAGAGTGTCGCCGGCTCTT +
Preference number: 6 (lower is better)
Translates to: RARGSFDGPWKW*SALGLRVSPAL
Trigger: AAGAGCCGGCGACACTCTCAGTCCCAGGGCAGACCACCATTTCCACGGTCCATCAAATGACCCTCTAGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 72 bp CAGGCCAACCCTCCCTGGGGCTTGCAGTTGGATGAGTaGAGTGGACAAGTGACCTGTGAGCTTAAAGCCGAG +
Preference number: 6 (lower is better)
Translates to: QANPPWGLQLDE*SGQVTCELKAE
Trigger: CTCGGCTTTAAGCTCACAGGTCACTTGTCCACTCCACTCATCCAACTGCAAGCCCCAGGGAGGGTTGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 72 bp CAGCTTGTCCAGCAAGACCCAACACCACACGTGTCATaGCACAGCATGCCCGCTATCAAAGTGCCCACCAGG +
Preference number: 6 (lower is better)
Translates to: QLVQQDPTPHVS*HSMPAIKVPTR
Trigger: CCTGGTGGGCACTTTGATAGCGGGCATGCTGTGCCATGACACGTGTGGTGTTGGGTCTTGCTGGACAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CAA 72 bp AGGTTGGTGGGCGTGTCGCCTGTGAGGTCCTTGCCTTaGGTGGTCTGTGATGCTACCAGGACTGGAGTGTGT +
Preference number: 6 (lower is better)
Translates to: RLVGVSPVRSLP*VVCDATRTGVC
Trigger: ACACACTCCAGTCCTGGTAGCATCACAGACCACCAAAGGCAAGGACCTCACAGGCGACACGCCCACCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS TCA 72 bp TGCTGTAGTTGGCGAACTTCCGGTCCCCATCCTCATTaGACTCCACGCGACCAGTCACCCCATCCGCATACT +
Preference number: 6 (lower is better)
Translates to: CCSWRTSGPHPH*TPRDQSPHPHT
Trigger: AGTATGCGGATGGGGTGACTGGTCGCGTGGAGTTCAATGAGGATGGGGACCGGAAGTTCGCCAACTACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000485413.1
ENST00000675295.1
ENST00000676396.1
CDS TCA 72 bp TGCCCACTTGCACCAGCTTGCGGTTCTGCAGGTTCATaGTGCTGTAGTTGGCGAACTTCCGGTCCCCATCCT +
Preference number: 6 (lower is better)
Translates to: CPLAPACGSAGS*CCSWRTSGPHP
Trigger: AGGATGGGGACCGGAAGTTCGCCAACTACAGCATCATGAACCTGCAGAACCGCAAGCTGGTGCAAGTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000485413.1
ENST00000675295.1
ENST00000676396.1
CDS TCA 72 bp GGTTGCTCTGTGGCACCGGACCTGTCCAGAGCAGCTTaGTTTCCCGGGTACCTAACTGATTTCCCCCTAAGC +
Preference number: 6 (lower is better)
Translates to: GCSVAPDLSRAA*FPGYLTDFPLS
Trigger: GCTTAGGGGGAAATCAGTTAGGTACCCGGGAAATCAAGCTGCTCTGGACAGGTCCGGTGCCACAGAGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS GCA 72 bp TTGCAATCCTTCAGTTGGGAAATCTGGCCCTCTCCCTaGTGTGGGCCTTTTCGCCTGGCACACCTGCACATC +
Preference number: 6 (lower is better)
Translates to: LQSFSWEIWPSP*CGPFRLAHLHI
Trigger: GATGTGCAGGTGTGCCAGGCGAAAAGGCCCACAGCAGGGAGAGGGCCAGATTTCCCAACTGAAGGATTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 72 bp ATCCTTCAGTTGGGAAATCTGGCCCTCTCCCTGCTGTaGGCCTTTTCGCCTGGCACACCTGCACATCACTTC +
Preference number: 6 (lower is better)
Translates to: ILQLGNLALSLL*AFSPGTPAHHF
Trigger: GAAGTGATGTGCAGGTGTGCCAGGCGAAAAGGCCCACAGCAGGGAGAGGGCCAGATTTCCCAACTGAAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 72 bp TTTATAGCAGCTGCAGGAGGAGCATGTAAGGCCCCGTaGGCAGCTCTAAGCAACAACCCTACCTTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: FIAAAGGACKAP*AALSNNPTLGW
Trigger: CCAGCCCAAGGTAGGGTTGTTGCTTAGAGCTGCCCACGGGGCCTTACATGCTCCTCCTGCAGCTGCTATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 72 bp ACTAAGGAGGAGCCAAAATATGACAGGCTGAAGGTCTaGGGTCAAGAAGGCCTGTGCCTGCCACTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: TKEEPKYDRLKV*GQEGLCLPLPR
Trigger: CCTGGGCAGTGGCAGGCACAGGCCTTCTTGACCCCAGACCTTCAGCCTGTCATATTTTGGCTCCTCCTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CAA 72 bp TTGAACTCCACGCGACCAGTCACCCCATCCGCATACTaGGAAGACATCAGCACTCTCTTGAAGAGCGGCCCG +
Preference number: 6 (lower is better)
Translates to: LNSTRPVTPSAY*EDISTLLKSGP
Trigger: CGGGCCGCTCTTCAAGAGAGTGCTGATGTCTTCCAAGTATGCGGATGGGGTGACTGGTCGCGTGGAGTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000350902.9
ENST00000371546.8
ENST00000371550.8
ENST00000371553.7
ENST00000371555.8
ENST00000371559.8
ENST00000371560.4
ENST00000371561.8
ENST00000471122.5
ENST00000485413.1
ENST00000675295.1
ENST00000676396.1
CDS CAA 72 bp GGATGGTACTGCGTGTCTTTGGAGGACCTACGCCTCTaGAAGCTGGAAGCCAGGGTGGAGGTGATAGCCCTA +
Preference number: 6 (lower is better)
Translates to: GWYCVSLEDLRL*KLEARVEVIAL
Trigger: TAGGGCTATCACCTCCACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGCAGTACCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371553.7
CDS CAA 72 bp ACCCCCACCTACGTGGGTGCCATTGTAGATGCCCACTaGCACCAGCTTGCGGTTCTGCAGGTTCATGATGCT +
Preference number: 6 (lower is better)
Translates to: TPTYVGAIVDAH*HQLAVLQVHDA
Trigger: AGCATCATGAACCTGCAGAACCGCAAGCTGGTGCAAGTGGGCATCTACAATGGCACCCACGTAGGTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485413.1
CDS CAA 72 bp CAACAATGTCCCAGCTCTGGCTCAGATGGCGGGTACTaGGCTCAGGTACCATCCTGTGTGGAGTGTGTAGGG +
Preference number: 6 (lower is better)
Translates to: QQCPSSGSDGGY*AQVPSCVECVG
Trigger: CCCTACACACTCCACACAGGATGGTACCTGAGCCAAGTACCCGCCATCTGAGCCAGAGCTGGGACATTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CAA 72 bp AATAGGGAGCTTTTTACAGTGGGCTCCACCCCAAGGTaGCTCTGTGGCACCGGACCTGTCCAGAGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: NRELFTVGSTPR*LCGTGPVQSSL
Trigger: CAAGCTGCTCTGGACAGGTCCGGTGCCACAGAGCAACCTTGGGGTGGAGCCCACTGTAAAAAGCTCCCTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CAA 90 bp CCATTTGCAAATAGGGAGCTTTTTACAGTGGGCTCCACCCCAAGGTaGCTCTGTGGCACCGGACCTGTCCAGAGCAGCTTGATTTCCCGG +
Preference number: 6 (lower is better)
Translates to: PFANRELFTVGSTPR*LCGTGPVQSSLISR
Trigger: CCGGGAAATCAAGCTGCTCTGGACAGGTCCGGTGCCACAGAGCAACCTTGGGGTGGAGCCCACTGTAAAAAGCTCCCTATTTGCAAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS GCA 72 bp CTGGGCTGTGTTCCTCCGGGTGTTTCACTGCTGTTTTaGTCCGCTCTGTTGGAGCCTAGCAGAGCTTTTAGG +
Preference number: 6 (lower is better)
Translates to: LGCVPPGVSLLF*SALLEPSRAFR
Trigger: CCTAAAAGCTCTGCTAGGCTCCAACAGAGCGGAGCAAAACAGCAGTGAAACACCCGGAGGAACACAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 72 bp CATCTGGTACCCTCGAGGCTTCTCTGTCTCTCCGCCTaGCCAGATGATCTTCCTGTCATTAGGGATGACCTG +
Preference number: 6 (lower is better)
Translates to: HLVPSRLLCLSA*PDDLPVIRDDL
Trigger: CAGGTCATCCCTAATGACAGGAAGATCATCTGGCCAGGCGGAGAGACAGAGAAGCCTCGAGGGTACCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485413.1
CDS CCA 72 bp CTCCGGGTGTTTCACTGCTGTTTTGCTCCGCTCTGTTaGAGCCTAGCAGAGCTTTTAGGTCAGGGACAGTGG +
Preference number: 6 (lower is better)
Translates to: LRVFHCCFAPLC*SLAELLGQGQW
Trigger: CCACTGTCCCTGACCTAAAAGCTCTGCTAGGCTCCAACAGAGCGGAGCAAAACAGCAGTGAAACACCCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 72 bp ATCTGTCTCCGTGCTAGAGGGTCATTTGATGGACCGTaGAAATGGTGGTCTGCCCTGGGACTGAGAGTGTCG +
Preference number: 6 (lower is better)
Translates to: ICLRARGSFDGP*KWWSALGLRVS
Trigger: CGACACTCTCAGTCCCAGGGCAGACCACCATTTCCACGGTCCATCAAATGACCCTCTAGCACGGAGACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 72 bp CAATATCTCTGTGTCCCGAGGGGAAGCGGAGGCACATaGGACACACAAGAGTTGGTAAGTGGCAGAGTCAGG +
Preference number: 6 (lower is better)
Translates to: QYLCVPRGSGGT*DTQELVSGRVR
Trigger: CCTGACTCTGCCACTTACCAACTCTTGTGTGTCCCATGTGCCTCCGCTTCCCCTCGGGACACAGAGATATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CAA 72 bp CCTCCGGGTGTTTCACTGCTGTTTTGCTCCGCTCTGTaGGAGCCTAGCAGAGCTTTTAGGTCAGGGACAGTG +
Preference number: 6 (lower is better)
Translates to: PPGVSLLFCSAL*EPSRAFRSGTV
Trigger: CACTGTCCCTGACCTAAAAGCTCTGCTAGGCTCCAACAGAGCGGAGCAAAACAGCAGTGAAACACCCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CAA 72 bp AGTGCCCACCAGGGCCTGACAGACAAGCCCGTCTTCTaGACGCAATTCAGGTCCATGACATGTGATGTGGTG +
Preference number: 6 (lower is better)
Translates to: SAHQGLTDKPVF*TQFRSMTCDVV
Trigger: CACCACATCACATGTCATGGACCTGAATTGCGTCAAGAAGACGGGCTTGTCTGTCAGGCCCTGGTGGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CAA 72 bp GCTCTGATGGGGTCCCAGGATGGTAATGGATCACCATaGATCACTTGCTGGCCAGATACCAGGCACTGCTCG +
Preference number: 6 (lower is better)
Translates to: ALMGSQDGNGSP*ITCWPDTRHCS
Trigger: CGAGCAGTGCCTGGTATCTGGCCAGCAAGTGATCAATGGTGATCCATTACCATCCTGGGACCCCATCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS TCA 72 bp CAACCTTCACTAAGGAGGAGCCAAAATATGACAGGCTaGAGGTCTGGGGTCAAGAAGGCCTGTGCCTGCCAC +
Preference number: 6 (lower is better)
Translates to: QPSLRRSQNMTG*RSGVKKACACH
Trigger: GTGGCAGGCACAGGCCTTCTTGACCCCAGACCTTCAGCCTGTCATATTTTGGCTCCTCCTTAGTGAAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS GCA 72 bp TGGAGTGGACAAGTGACCTGTGAGCTTAAAGCCGAGTaGAGGGGGCGTAATGGGGGACGATTAGTGCCTTTT +
Preference number: 6 (lower is better)
Translates to: WSGQVTCELKAE*RGRNGGRLVPF
Trigger: AAAAGGCACTAATCGTCCCCCATTACGCCCCCTGCACTCGGCTTTAAGCTCACAGGTCACTTGTCCACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CCA 72 bp TACCACTCTTTCTATCCCTGCCTGATTGCCTTCCTATaGAATGGGTACCGGCGGGCGACTCTGCAGGTTCTT +
Preference number: 6 (lower is better)
Translates to: YHSFYPCLIAFL*NGYRRATLQVL
Trigger: AAGAACCTGCAGAGTCGCCCGCCGGTACCCATTCCATAGGAAGGCAATCAGGCAGGGATAGAAAGAGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675295.1
CDS CAA 90 bp ATATCAGTGGGATGGTACTGCGTGTCTTTGGAGGACCTACGCCTCTaGAAGCTGGAAGCCAGGGTGGAGGTGATAGCCCTAAATGTGGCT +
Preference number: 6 (lower is better)
Translates to: ISVGWYCVSLEDLRL*KLEARVEVIALNVA
Trigger: AGCCACATTTAGGGCTATCACCTCCACCCTGGCTTCCAGCTTCAAGAGGCGTAGGTCCTCCAAAGACACGCAGTACCATCCCACTGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371553.7
CDS GCA 72 bp CCCGGGTACCTAACTGATTTCCCCCTAAGCTACTGCTaGAGCTGTTGCAATCCTTCAGTTGGGAAATCTGGC +
Preference number: 6 (lower is better)
Translates to: PGYLTDFPLSYC*SCCNPSVGKSG
Trigger: GCCAGATTTCCCAACTGAAGGATTGCAACAGCTGCAGCAGTAGCTTAGGGGGAAATCAGTTAGGTACCCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CAA 90 bp CCTCAGAAGGCTCTGATGGGGTCCCAGGATGGTAATGGATCACCATaGATCACTTGCTGGCCAGATACCAGGCACTGCTCGAAGTGTTTT +
Preference number: 6 (lower is better)
Translates to: PQKALMGSQDGNGSP*ITCWPDTRHCSKCF
Trigger: AAAACACTTCGAGCAGTGCCTGGTATCTGGCCAGCAAGTGATCAATGGTGATCCATTACCATCCTGGGACCCCATCAGAGCCTTCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS GCA 72 bp CTAACTGATTTCCCCCTAAGCTACTGCTGCAGCTGTTaGAATCCTTCAGTTGGGAAATCTGGCCCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: LTDFPLSYCCSC*NPSVGKSGPLP
Trigger: AGGGAGAGGGCCAGATTTCCCAACTGAAGGATTGCAACAGCTGCAGCAGTAGCTTAGGGGGAAATCAGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS GCA 72 bp AGCCCTAAATGTGGCTTTCTTTTTAGGGTCAGGCTCTaGTCTACCACTCTTTCTATCCTTGCTCGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: SPKCGFLFRVRL*STTLSILARAG
Trigger: CCCAGCACGAGCAAGGATAGAAAGAGTGGTAGAGCAGAGCCTGACCCTAAAAAGAAAGCCACATTTAGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675885.1
CDS GCA 72 bp AGCCCTAAATGTGGCTTTCTTTTTAGGGTCAGGCTCTaGTCTACCACTCTTTCTATCCTGCAGGTTCTTCCG +
Preference number: 6 (lower is better)
Translates to: SPKCGFLFRVRL*STTLSILQVLP
Trigger: CGGAAGAACCTGCAGGATAGAAAGAGTGGTAGAGCAGAGCCTGACCCTAAAAAGAAAGCCACATTTAGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371546.8
ENST00000371553.7
ENST00000371561.8
CDS GCA 72 bp TTTCCCGGGTACCTAACTGATTTCCCCCTAAGCTACTaGTGCAGCTGTTGCAATCCTTCAGTTGGGAAATCT +
Preference number: 6 (lower is better)
Translates to: FPGYLTDFPLSY*CSCCNPSVGKS
Trigger: AGATTTCCCAACTGAAGGATTGCAACAGCTGCAGCAGTAGCTTAGGGGGAAATCAGTTAGGTACCCGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675064.1
CDS CAA 72 bp GCAGCCCTTCGGTGTTTGCTCTACATAACGATGCTATaGGATGTCAGTGACACAAAACAGAAGTGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: AALRCLLYITML*DVSDTKQKCSQ
Trigger: CTGGGAGCACTTCTGTTTTGTGTCACTGACATCCAATAGCATCGTTATGTAGAGCAAACACCGAAGGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS TCA 72 bp GTGTTTGCTCTACATAACGATGCTATTGGATGTCAGTaGCACAAAACAGAAGTGCTCCCAGTAGCACTGGCC +
Preference number: 6 (lower is better)
Translates to: VFALHNDAIGCQ*HKTEVLPVALA
Trigger: GGCCAGTGCTACTGGGAGCACTTCTGTTTTGTGTCACTGACATCCAATAGCATCGTTATGTAGAGCAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676396.1
CDS CAA 72 bp ACCAGGCACTGCTCGAAGTGTTTTACGGGGATTATGTaGTTTAACTTTCACAATATCTCTGTGTCCCGAGGG +
Preference number: 6 (lower is better)
Translates to: TRHCSKCFTGIM*FNFHNISVSRG
Trigger: CCCTCGGGACACAGAGATATTGTGAAAGTTAAACAACATAATCCCCGTAAAACACTTCGAGCAGTGCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676396.1