RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRIK5 (Homo sapiens)

Ensembl gene IDs: ENSG00000105737

Ensembl transcript IDs: ENST00000262895.7, ENST00000301218.8, ENST00000454993.6, ENST00000593562.5, ENST00000594528.1, ENST00000602210.1

Found 420 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCCACTaGGGGGCGCAGGCGGGCTCCAGAGCCAGGCCTCGGACTTCGCGG +
Preference number: 1 (lower is better)
Translates to: GSCALLARGTLSRVH*GAQAGSRARPRTSR
Trigger: CCGCGAAGTCCGAGGCCTGGCTCTGGAGCCCGCCTGCGCCCCCCAGTGGACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262895.7
3UTR GCA 90 bp TTCTCCAGGATGGTTGTGACCACCAGGGTCTTGTTGGCCAGTGTCTaGGACAGGTTGATGTCCAGGGTGGTGGCATTCATGGCCAGGGTG +
Preference number: 1 (lower is better)
Translates to: FSRMVVTTRVLLASV*DRLMSRVVAFMARV
Trigger: CACCCTGGCCATGAATGCCACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTCACAACCATCCTGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR TCA 90 bp CAGGATGGGGAAGTCCATGGTGGTGAGGATGTACTTGTAAAACGCTaGGGTCATTCCCAGTTCCGAGGCCTTACGGAGGATGAGGTGGGA +
Preference number: 1 (lower is better)
Translates to: QDGEVHGGEDVLVKR*GHSQFRGLTEDEVG
Trigger: TCCCACCTCATCCTCCGTAAGGCCTCGGAACTGGGAATGACCTCAGCGTTTTACAAGTACATCCTCACCACCATGGACTTCCCCATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR TCA 90 bp ATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTCTAAGGACTaGGCCCTGGAGCCCCACAACAAACAGAGCCTGGGGAGAAAGAGA +
Preference number: 1 (lower is better)
Translates to: IQVVEKDREEKQSKD*ALEPHNKQSLGRKR
Trigger: TCTCTTTCTCCCCAGGCTCTGTTTGTTGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
3UTR CCA 90 bp TGCTCTCTTCCTCCTTATACACATGTGTGTCTCAAGACTGGGAGGTaGAAAGCTGTTGTTTTTGCTTGTCCAGTGCCTGTTCTCATGGCA +
Preference number: 1 (lower is better)
Translates to: CSLPPYTHVCLKTGR*KAVVFACPVPVLMA
Trigger: TGCCATGAGAACAGGCACTGGACAAGCAAAAACAACAGCTTTCCACCTCCCAGTCTTGAGACACACATGTGTATAAGGAGGAAGAGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CCA 90 bp GCTCGGGCGCCCCGTACAGCCCATCCTCCACCAACCGCAGGCGGTAGCGGAAGCTTCCCCGACAGGGCCTaGAAGTTGGGCCGGCGCATG +
Preference number: 2 (lower is better)
Translates to: ARAPRTAHPPPTAGGSGSFPDRA*KLGRRM
Trigger: CATGCGCCGGCCCAACTTCCAGGCCCTGTCGGGGAA...GCTTCCGCTACCGCCTGCGGTTGGTGGAGGATGGGCTGTACGGGGCGCCCGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR CAA 90 bp GCCTTCCGGTTGATGAGCTCGCCAACCATGCCCGTCCAGGAGCCGTaGGGCTCGGGCGCCCCGTACAGCCCATCCTCCACCAACCGCAGG +
Preference number: 2 (lower is better)
Translates to: AFRLMSSPTMPVQEP*GSGAPYSPSSTNRR
Trigger: CCTGCGGTTGGTGGAGGATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTGGCGAGCTCATCAACCGGAAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR GCA 90 bp CGCCAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATGCGCTCACCACCACGTaGACGGCGTCAAACATCAGG +
Preference number: 2 (lower is better)
Translates to: RQPCPSRSRWARAPRTAHALTTT*TASNIR
Trigger: CCTGATGTTTGACGCCGTGCACGTGGTGGTGAGCGC...ATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR TCA 90 bp CGCCAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATTACTGGGGTACAGGCTaGCAGACGCGAAGCGAAGGT +
Preference number: 2 (lower is better)
Translates to: RQPCPSRSRWARAPRTAHYWGTG*QTRSEG
Trigger: ACCTTCGCTTCGCGTCTGTCAGCCTGTACCCCAGTA...ATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CCA 90 bp CGCCAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATTTCACACCGATCTCCTaGCTGCGGTTCAGCTCTCGG +
Preference number: 2 (lower is better)
Translates to: RQPCPSRSRWARAPRTAHFTPIS*LRFSSR
Trigger: CCGAGAGCTGAACCGCAGCCAGGAGATCGGTGTGAA...ATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CCA 90 bp CGCCAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATACCCCAATCTCACGGTaGCCCTGCCGGGACTTTTCT +
Preference number: 2 (lower is better)
Translates to: RQPCPSRSRWARAPRTAHTPISR*PCRDFS
Trigger: AGAAAAGTCCCGGCAGGGCCACCGTGAGATTGGGGT...ATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CCA 90 bp GCTCGGGCGCCCCGTACAGCCCATCCTCCACCAACCGCAGGCGGTAGCGGAAGCCCACCAGGGTCTTGTTaGCCAGTGTCTGCGACAGGT +
Preference number: 2 (lower is better)
Translates to: ARAPRTAHPPPTAGGSGSPPGSC*PVSATG
Trigger: ACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGG...GCTTCCGCTACCGCCTGCGGTTGGTGGAGGATGGGCTGTACGGGGCGCCCGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR TCA 90 bp CCCGACAGGGCCTGGAAGTTGGGCCGGCGCATGACGTATGGGTTCTCCAGGATGGGGAGACCGCCAAGCTaGCGTCCTCGTTACTGGGGT +
Preference number: 2 (lower is better)
Translates to: PDRAWKLGRRMTYGFSRMGRPPS*RPRYWG
Trigger: ACCCCAGTAACGAGGACGTCAGCTTGGCGGTCTCCC...CATCCTGGAGAACCCATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CCA 90 bp CAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATCCTGGACCCACCTTGATGTaGGGGATCTCCTTCTCTCCA +
Preference number: 2 (lower is better)
Translates to: QPCPSRSRWARAPRTAHPGPTLM*GISFSP
Trigger: TGGAGAGAAGGAGATCCCCCACATCAAGGTGGGTCC...AGGATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR GCA 90 bp CGCCAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATACAATACCGTCCAGATaGAGGATGGGGAAGTCCATG +
Preference number: 2 (lower is better)
Translates to: RQPCPSRSRWARAPRTAHTIPSR*RMGKSM
Trigger: CATGGACTTCCCCATCCTGCATCTGGACGGTATTGT...ATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR GCA 90 bp CGCCAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATGGGACTTTTCTAGGATaGGCAGGGTGTAGTTGGTTC +
Preference number: 2 (lower is better)
Translates to: RQPCPSRSRWARAPRTAHGTFLG*AGCSWF
Trigger: GAACCAACTACACCCTGCGCATCCTAGAAAAGTCCC...ATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR CAA 90 bp ACGCAGAAGCCCTCGAAGCGTTCGTTCCCCGACAGGGCCTGGAAGTaGGGCCGGCGCATGACGTATGGGTTCTCCAGGATGGTTGTGACC +
Preference number: 2 (lower is better)
Translates to: TQKPSKRSFPDRAWK*GRRMTYGFSRMVVT
Trigger: GGTCACAACCATCCTGGAGAACCCATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTCGGGGAACGAACGCTTCGAGGGCTTCTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR TCA 90 bp GACCACCAGGGTCTTGTTGGCCAGTGTCTGCGACAGGTTGATGTCCAGGGTGGTCAGCCTTGGCGCAGATaGGGCTGGCCGAGGGGTAGT +
Preference number: 2 (lower is better)
Translates to: DHQGLVGQCLRQVDVQGGQPWRR*GWPRGS
Trigger: ACTACCCCTCGGCCAGCCTCATCTGCGCCAAGGCTG...ACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR TCA 90 bp TCCACGCAGAAGCCCTCGAAGCGTTCGTTCCCCGACAGGGCCTGGAAGTTGGGCCCCTCCAGGACATGTTaGGGCTGCGGACAAACTCAG +
Preference number: 2 (lower is better)
Translates to: STQKPSKRSFPDRAWKLGPSRTC*GCGQTQ
Trigger: CTGAGTTTGTCCGCAGCCTCAACATGTCCTGGAGGG...GCCCAACTTCCAGGCCCTGTCGGGGAACGAACGCTTCGAGGGCTTCTGCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR GCA 90 bp GCTGACGTCCTCGTTACTGGGGTACAGGCTGACAGACGCGAAGCGAAGGTACTGCACGGTGGAGGCAGATaGTGGGCTAGAGGAGGGCCC +
Preference number: 2 (lower is better)
Translates to: ADVLVTGVQADRREAKVLHGGGR*WARGGP
Trigger: GGGCCCTCCTCTAGCCCAGCATCTGCCTCCACCGTG...CAGTACCTTCGCTTCGCGTCTGTCAGCCTGTACCCCAGTAACGAGGACGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CCA 90 bp GGCCACAGCCAGGTCTGCCTTCCGGTTGATGAGCTCGCCAACCATGCCCGTCCACGTGGGGCCAAATGTTaGCCGATGTACAGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: GHSQVCLPVDELANHARPRGAKC*PMYRPE
Trigger: CTCTGGCCTGTACATCGGCCAACATTTGGCCCCACG...TGGACGGGCATGGTTGGCGAGCTCATCAACCGGAAGGCAGACCTGGCTGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR TCA 90 bp GATGAGGAAGCCACGCACCAGTTCCTCCAATCGCAGCAGGCACTCAGCCTTGGCCCTCGGGACCCACCTTaGTGTGGGGGATCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: DEEATHQFLQSQQALSLGPRDPP*CGGSPS
Trigger: AGAAGGAGATCCCCCACATCAAGGTGGGTCCCGAGG...GCCAAGGCTGAGTGCCTGCTGCGATTGGAGGAACTGGTGCGTGGCTTCCTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR TCA 90 bp CAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATCCTGTACTTGTAAAACGCTaGGGTCATTCCCAGTTCCGA +
Preference number: 2 (lower is better)
Translates to: QPCPSRSRWARAPRTAHPVLVKR*GHSQFR
Trigger: TCGGAACTGGGAATGACCTCAGCGTTTTACAAGTAC...AGGATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR TCA 90 bp GACCACCAGGGTCTTGTTGGCCAGTGTCTGCGACAGGTTGATGTCCAGGGTGGTAAACATCAGGGCGGCTaGCAGCGCAGGGCCCAGGTA +
Preference number: 2 (lower is better)
Translates to: DHQGLVGQCLRQVDVQGGKHQGG*QRRAQV
Trigger: TACCTGGGCCCTGCGCTGTCAGCCGCCCTGATGTTT...ACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR GCA 90 bp CCCGACAGGGCCTGGAAGTTGGGCCGGCGCATGACGTATGGGTTCTCCAGGATGTTGTTGGCCAGTGTCTaGGACAGGTTGATGTCCAGG +
Preference number: 2 (lower is better)
Translates to: PDRAWKLGRRMTYGFSRMLLASV*DRLMSR
Trigger: CCTGGACATCAACCTGTCGCAGACACTGGCCAACAA...CATCCTGGAGAACCCATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CCA 90 bp TCCACGCAGAAGCCCTCGAAGCGTTCGTTCCCCGACAGGGCCTGGAAGTTGGGCTGCGCAGGGTGTAGTTaGTTCTCTGCCCTTTGCTGT +
Preference number: 2 (lower is better)
Translates to: STQKPSKRSFPDRAWKLGCAGCS*FSALCC
Trigger: ACAGCAAAGGGCAGAGAACCAACTACACCCTGCGCA...GCCCAACTTCCAGGCCCTGTCGGGGAACGAACGCTTCGAGGGCTTCTGCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR TCA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGGGGAAGAAGGGGCTTTaGGGATTGAGAGTGACTGGC +
Preference number: 2 (lower is better)
Translates to: RAWGERETQRGSLGRSDRGKKGL*GLRVTG
Trigger: GCCAGTCACTCTCAATCCTCAAAGCCCCTTCTTCCC...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301218.8
3UTR-3UTR TCA 90 bp GATGGTTGTGACCACCAGGGTCTTGTTGGCCAGTGTCTGCGACAGGTTGATGTCGCGAAGCGAAGGTACTaGAGGCGGGGTGTCTCCTCG +
Preference number: 2 (lower is better)
Translates to: DGCDHQGLVGQCLRQVDVAKRRY*RRGVSS
Trigger: CGAGGAGACACCCCGCCTTCAGTACCTTCGCTTCGC...GACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTCACAACCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR GCA 90 bp AAATGTTGGCCGATGTACAGGCCAGAGGCTTCACACCGATCTCCTGGCTGCGGTCAGGGCCCAGGTAGGTaGTGGCTTCACAGTTCTCCC +
Preference number: 2 (lower is better)
Translates to: KCWPMYRPEASHRSPGCGQGPGR*WLHSSP
Trigger: GGGAGAACTGTGAAGCCAGCACCTACCTGGGCCCTG...ACCGCAGCCAGGAGATCGGTGTGAAGCCTCTGGCCTGTACATCGGCCAACATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CCA 90 bp CCCGACAGGGCCTGGAAGTTGGGCCGGCGCATGACGTATGGGTTCTCCAGGATGAGAAGCCCAGGATGTTaGAGGAGTCCTCCACAATAC +
Preference number: 2 (lower is better)
Translates to: PDRAWKLGRRMTYGFSRMRSPGC*RSPPQY
Trigger: GTATTGTGGAGGACTCCTCCAACATCCTGGGCTTCT...CATCCTGGAGAACCCATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CCA 90 bp TTGTTGGCCAGTGTCTGCGACAGGTTGATGTCCAGGGTGGTGGCATTCATGGCCGGCCCAGGTAGGTGCTaGCTTCACAGTTCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: LLASVCDRLMSRVVAFMAGPGRC*LHSSPS
Trigger: GGAGGGAGAACTGTGAAGCCAGCACCTACCTGGGCC...GGCCATGAATGCCACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR CAA 90 bp ATGGTTGTGACCACCAGGGTCTTGTTGGCCAGTGTCTGCGACAGGTaGATGTCCAGGGTGGTGGCATTCATGGCCAGGGTGCGGTTAGAG +
Preference number: 2 (lower is better)
Translates to: MVVTTRVLLASVCDR*MSRVVAFMARVRLE
Trigger: CTCTAACCGCACCCTGGCCATGAATGCCACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTCACAACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CCA 90 bp AGGCTTCACACCGATCTCCTGGCTGCGGTTCAGCTCTCGGACAGCGCTCACCACCAGTGCCTGTTCTCATaGCAGAACCCTAACTTCTCC +
Preference number: 2 (lower is better)
Translates to: RLHTDLLAAVQLSDSAHHQCLFS*QNPNFS
Trigger: GGAGAAGTTAGGGTTCTGCCATGAGAACAGGCACTG...GTGGTGAGCGCTGTCCGAGAGCTGAACCGCAGCCAGGAGATCGGTGTGAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR TCA 90 bp GGACATGTTGAGGCTGCGGACAAACTCAGGGTAGAAGGGGTGGGACGTGTTGAAGCGTCTCCTTGGAGATaGGGAAGCCACGCACCAGTT +
Preference number: 2 (lower is better)
Translates to: GHVEAADKLRVEGVGRVEASPWR*GSHAPV
Trigger: AACTGGTGCGTGGCTTCCTCATCTCCAAGGAGACGC...TTCAACACGTCCCACCCCTTCTACCCTGAGTTTGTCCGCAGCCTCAACATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR CAA 90 bp ATGACGTATGGGTTCTCCAGGATGGTTGTGACCACCAGGGTCTTGTaGGCCAGTGTCTGCGACAGGTTGATGTCCAGGGTGGTGGCATTC +
Preference number: 2 (lower is better)
Translates to: MTYGFSRMVVTTRVL*ASVCDRLMSRVVAF
Trigger: GAATGCCACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTCACAACCATCCTGGAGAACCCATACGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR GCA 90 bp GGCCACAGCCAGGTCTGCCTTCCGGTTGATGAGCTCGCCAACCATGCCCGTCCAGAAAGCTGTTGTTTTTaGTTGTCCAGTGCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: GHSQVCLPVDELANHARPESCCF*LSSACS
Trigger: AGAACAGGCACTGGACAAGCAAAAACAACAGCTTTC...TGGACGGGCATGGTTGGCGAGCTCATCAACCGGAAGGCAGACCTGGCTGTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CCA 90 bp ACAGGCCAGAGGCTTCACACCGATCTCCTGGCTGCGGTTCAGCTCTCGGACAGCCTCAAGACTGGGAGGTaGAAAGCTGTTGTTTTTGCT +
Preference number: 2 (lower is better)
Translates to: TGQRLHTDLLAAVQLSDSLKTGR*KAVVFA
Trigger: AGCAAAAACAACAGCTTTCCACCTCCCAGTCTTGAG...GCTGTCCGAGAGCTGAACCGCAGCCAGGAGATCGGTGTGAAGCCTCTGGCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR TCA 90 bp TTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTCGAGCCTGGGAAGGAGTaGCCGGAGAAGTGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: FGWWDHSSSGERPRREAVEPGKE*PEKWEK
Trigger: CTTCTCCCACTTCTCCGGTCACTCCTTCCCAGGCTC...GACTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
3UTR-3UTR CCA 90 bp TTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTCCCCAACGAGGGAGCCTaGGAAGGAGTGACCGGAGAA +
Preference number: 2 (lower is better)
Translates to: FGWWDHSSSGERPRREAVPNEGA*EGVTGE
Trigger: TTCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGG...GACTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
3UTR-3UTR TCA 90 bp GGACATGTTGAGGCTGCGGACAAACTCAGGGTAGAAGGGGTGGGACGTGTTGAAGGAAGTCCATGGTGGTaGGGATGTACTTGTAAAACG +
Preference number: 2 (lower is better)
Translates to: GHVEAADKLRVEGVGRVEGSPWW*GCTCKT
Trigger: CGTTTTACAAGTACATCCTCACCACCATGGACTTCC...TTCAACACGTCCCACCCCTTCTACCCTGAGTTTGTCCGCAGCCTCAACATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CCA 90 bp CCAGGACATGTTGAGGCTGCGGACAAACTCAGGGTAGAAGGGGTGGGACGTGTTCAGACACAACCCCTTTaGGTAAGATCTGACACATTC +
Preference number: 2 (lower is better)
Translates to: PGHVEAADKLRVEGVGRVQTQPL*VRSDTF
Trigger: GAATGTGTCAGATCTTACCCAAAGGGGTTGTGTCTG...AACACGTCCCACCCCTTCTACCCTGAGTTTGTCCGCAGCCTCAACATGTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CAA 90 bp CAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATCCTACCACCAGGGTCTTGTaGGCCAGTGTCTGCGACAGG +
Preference number: 3 (lower is better)
Translates to: QPCPSRSRWARAPRTAHPTTRVL*ASVCDR
Trigger: CCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGT...AGGATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR GCA 72 bp CCTGAGCAGTCCCAGAATGGGGTCCTCTCCGCTGACTaGTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCCC +
Preference number: 3 (lower is better)
Translates to: PEQSQNGVLSAD*FPLPRAAPEVP
Trigger: GGGGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATTCTGGGACTGCTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262895.7
3UTR CCA 72 bp GCCGATGTACAGGCCAGAGGCTTCACACCGATCTCCTaGCTGCGGTTCAGCTCTCGGACAGCGCTCACCACC +
Preference number: 3 (lower is better)
Translates to: ADVQARGFTPIS*LRFSSRTALTT
Trigger: GGTGGTGAGCGCTGTCCGAGAGCTGAACCGCAGCCAGGAGATCGGTGTGAAGCCTCTGGCCTGTACATCGGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR CCA 72 bp CAGAAGCCCTCGAAGCGTTCGTTCCCCGACAGGGCCTaGAAGTTGGGCCGGCGCATGACGTATGGGTTCTCC +
Preference number: 3 (lower is better)
Translates to: QKPSKRSFPDRA*KLGRRMTYGFS
Trigger: GGAGAACCCATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTCGGGGAACGAACGCTTCGAGGGCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CAA 90 bp TGGTCCCGTGGGGCCAAATGTTGGCCGATGTACAGGCCAGAGGCTTCACACCGAAGCAGGCACTCAGCCTaGGCGCAGATGAGGCTGGCC +
Preference number: 3 (lower is better)
Translates to: WSRGAKCWPMYRPEASHRSRHSA*AQMRLA
Trigger: GGCCAGCCTCATCTGCGCCAAGGCTGAGTGCCTGCT...TCGGTGTGAAGCCTCTGGCCTGTACATCGGCCAACATTTGGCCCCACGGGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CAA 90 bp GGCCACAGCCAGGTCTGCCTTCCGGTTGATGAGCTCGCCAACCATGCCCGTCCAGTGACCACCAGGGTCTaGTTGGCCAGTGTCTGCGAC +
Preference number: 3 (lower is better)
Translates to: GHSQVCLPVDELANHARPVTTRV*LASVCD
Trigger: GTCGCAGACACTGGCCAACAAGACCCTGGTGGTCAC...TGGACGGGCATGGTTGGCGAGCTCATCAACCGGAAGGCAGACCTGGCTGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CAA 90 bp CCCGACAGGGCCTGGAAGTTGGGCCGGCGCATGACGTATGGGTTCTCCAGGATGAAGGGGTGGGACGTGTaGAACATGGAGAAGCCCAGG +
Preference number: 3 (lower is better)
Translates to: PDRAWKLGRRMTYGFSRMKGWDV*NMEKPR
Trigger: CCTGGGCTTCTCCATGTTCAACACGTCCCACCCCTT...CATCCTGGAGAACCCATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CAA 90 bp GGCCACAGCCAGGTCTGCCTTCCGGTTGATGAGCTCGCCAACCATGCCCGTCCATTGGTTCTCTGCCCTTaGCTGTTGAACTCGACCCGC +
Preference number: 3 (lower is better)
Translates to: GHSQVCLPVDELANHARPLVLCP*LLNSTR
Trigger: GCGGGTCGAGTTCAACAGCAAAGGGCAGAGAACCAA...TGGACGGGCATGGTTGGCGAGCTCATCAACCGGAAGGCAGACCTGGCTGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR TCA 72 bp CCACCAGGGTCTTGTTGGCCAGTGTCTGCGACAGGTTaGTGTCCAGGGTGGTGGCATTCATGGCCAGGGTGC +
Preference number: 3 (lower is better)
Translates to: PPGSCWPVSATG*CPGWWHSWPGC
Trigger: GCACCCTGGCCATGAATGCCACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CAA 90 bp ACAGGCCAGAGGCTTCACACCGATCTCCTGGCTGCGGTTCAGCTCTCGGACAGCTCCCTCCAGGACATGTaGAGGCTGCGGACAAACTCA +
Preference number: 3 (lower is better)
Translates to: TGQRLHTDLLAAVQLSDSSLQDM*RLRTNS
Trigger: TGAGTTTGTCCGCAGCCTCAACATGTCCTGGAGGGA...GCTGTCCGAGAGCTGAACCGCAGCCAGGAGATCGGTGTGAAGCCTCTGGCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR TCA 72 bp GGTACTGAAGGCGGGGTGTCTCCTCGGGACCCACCTTaGTGTGGGGGATCTCCTTCTCTCCACAGATATGGC +
Preference number: 3 (lower is better)
Translates to: GTEGGVSPRDPP*CGGSPSLHRYG
Trigger: GCCATATCTGTGGAGAGAAGGAGATCCCCCACATCAAGGTGGGTCCCGAGGAGACACCCCGCCTTCAGTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR CCA 72 bp GAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTaGGAAGGAGTGACCGGAGAAGTGGGAGAAGGGGAA +
Preference number: 3 (lower is better)
Translates to: EPGEKEKPNEGA*EGVTGEVGEGE
Trigger: TTCCCCTTCTCCCACTTCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
3UTR-3UTR CAA 90 bp GACCACCAGGGTCTTGTTGGCCAGTGTCTGCGACAGGTTGATGTCCAGGGTGGTACTGACAGCGTCTCCTaGGAGATGAGGAAGCCACGC +
Preference number: 3 (lower is better)
Translates to: DHQGLVGQCLRQVDVQGGTDSVS*EMRKPR
Trigger: GCGTGGCTTCCTCATCTCCAAGGAGACGCTGTCAGT...ACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CAA 90 bp GATGGTTGTGACCACCAGGGTCTTGTTGGCCAGTGTCTGCGACAGGTTGATGTCTCCTCGGGACCCACCTaGATGTGGGGGATCTCCTTC +
Preference number: 3 (lower is better)
Translates to: DGCDHQGLVGQCLRQVDVSSGPT*MWGISF
Trigger: GAAGGAGATCCCCCACATCAAGGTGGGTCCCGAGGA...GACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTCACAACCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR TCA 72 bp GTGGAGAAAGACCGAGAAGAGAAGCAGTCTAAGGACTaGGCCCTGGAGCCCCACAACAAACAGAGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: VEKDREEKQSKD*ALEPHNKQSLG
Trigger: CCCCAGGCTCTGTTTGTTGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTTCTCTTCTCGGTCTTTCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
3UTR TCA 72 bp TGCGCAGGGTGTAGTTGGTTCTCTGCCCTTTGCTGTTaGACTCGACCCGCCCGGTCAGCCCATCATACTCTA +
Preference number: 3 (lower is better)
Translates to: CAGCSWFSALCC*TRPARSAHHTL
Trigger: TAGAGTATGATGGGCTGACCGGGCGGGTCGAGTTCAACAGCAAAGGGCAGAGAACCAACTACACCCTGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR GCA 72 bp CAATCTCACGGTGGCCCTGCCGGGACTTTTCTAGGATaGGCAGGGTGTAGTTGGTTCTCTGCCCTTTGCTGT +
Preference number: 3 (lower is better)
Translates to: QSHGGPAGTFLG*AGCSWFSALCC
Trigger: ACAGCAAAGGGCAGAGAACCAACTACACCCTGCGCATCCTAGAAAAGTCCCGGCAGGGCCACCGTGAGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR GCA 72 bp ATGGTTGTGACCACCAGGGTCTTGTTGGCCAGTGTCTaGGACAGGTTGATGTCCAGGGTGGTGGCATTCATG +
Preference number: 3 (lower is better)
Translates to: MVVTTRVLLASV*DRLMSRVVAFM
Trigger: CATGAATGCCACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTCACAACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR GCA 72 bp GAAGAAGGGGCTTTGAGGATTGAGAGTGACTGGCTGTaGCGAAGCCCACTGCTACCTCATATACATGAGGCC +
Preference number: 3 (lower is better)
Translates to: EEGALRIESDWL*RSPLLPHIHEA
Trigger: GGCCTCATGTATATGAGGTAGCAGTGGGCTTCGGCACAGCCAGTCACTCTCAATCCTCAAAGCCCCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
3UTR CCA 72 bp AAGACCGAGAAGAGAAGCAGTCTAAGGACTGAGCCCTaGAGCCCCACAACAAACAGAGCCTGGGGAGAAAGA +
Preference number: 3 (lower is better)
Translates to: KTEKRSSLRTEP*SPTTNRAWGER
Trigger: TCTTTCTCCCCAGGCTCTGTTTGTTGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTTCTCTTCTCGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
3UTR-3UTR CAA 90 bp GACCACCAGGGTCTTGTTGGCCAGTGTCTGCGACAGGTTGATGTCCAGGGTGGTAGCTGTTGTTTTTGCTaGTCCAGTGCCTGTTCTCAT +
Preference number: 3 (lower is better)
Translates to: DHQGLVGQCLRQVDVQGGSCCFC*SSACSH
Trigger: ATGAGAACAGGCACTGGACAAGCAAAAACAACAGCT...ACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR-3UTR CAA 90 bp TTGTTGGCCAGTGTCTGCGACAGGTTGATGTCCAGGGTGGTGGCATTCATGGCCGGAAAGCTGTTGTTTTaGCTTGTCCAGTGCCTGTTC +
Preference number: 3 (lower is better)
Translates to: LLASVCDRLMSRVVAFMAGKLLF*LVQCLF
Trigger: GAACAGGCACTGGACAAGCAAAAACAACAGCTTTCC...GGCCATGAATGCCACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR CCA 72 bp GAAGGGGAAGAAGGGGCTTTGAGGATTGAGAGTGACTaGCTGTGCCGAAGCCCACTGCTACCTCATATACAT +
Preference number: 3 (lower is better)
Translates to: EGEEGALRIESD*LCRSPLLPHIH
Trigger: ATGTATATGAGGTAGCAGTGGGCTTCGGCACAGCCAGTCACTCTCAATCCTCAAAGCCCCTTCTTCCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
3UTR TCA 72 bp GAAGTCCATGGTGGTGAGGATGTACTTGTAAAACGCTaGGGTCATTCCCAGTTCCGAGGCCTTACGGAGGAT +
Preference number: 3 (lower is better)
Translates to: EVHGGEDVLVKR*GHSQFRGLTED
Trigger: ATCCTCCGTAAGGCCTCGGAACTGGGAATGACCTCAGCGTTTTACAAGTACATCCTCACCACCATGGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp GGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGCGGGAGCGGAGACTGCTCCGTCCAGGAGCCGTTaGGCTCGGGCGCCCCGTACA +
Preference number: 4 (lower is better)
Translates to: GAPAHKSCPAPAAGAETAPSRSR*ARAPRT
Trigger: TGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGG...AGCAGTCTCCGCTCCCGCAGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp GGCAAAATCGCGGCGTCCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGGAGTCCTCGGTTCCTaGGCCCTTCTCGCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: GKIAASGAPAHKSCPAPAGVLGS*ALLARG
Trigger: GCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCC...AGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCCGGACGCCGCGATTTTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp GGCAAAATCGCGGCGTCCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTCAGCCTTGGCGCAGATaGGGCTGGCCGAGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: GKIAASGAPAHKSCPAPAQPWRR*GWPRGS
Trigger: ACTACCCCTCGGCCAGCCTCATCTGCGCCAAGGCTG...AGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCCGGACGCCGCGATTTTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp CCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGCGGGAGCGGAGACTGCACCGATCTCCTGGCTaGGGTTCAGCTCTCGGACAG +
Preference number: 4 (lower is better)
Translates to: PGRRRTSPVPRPLRERRLHRSPG*GSALGQ
Trigger: CTGTCCGAGAGCTGAACCGCAGCCAGGAGATCGGTG...CAGTCTCCGCTCCCGCAGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp TCCCCAGCCCCTGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCGGCACCTCCATGCGCTaGACGGTGAGGAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SPAPGVLGSCALLARGTLGTSMR*TVRKAA
Trigger: GGCCGCCTTCCTCACCGTGCAGCGCATGGAGGTGCC...GAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCAGGGGCTGGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp CCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGCGGGAGCGGAGACTGGTCCTCTCCGCTGACTaGTTTCCGCTTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PGRRRTSPVPRPLRERRLVLSAD*FPLPRA
Trigger: GGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGAC...CAGTCTCCGCTCCCGCAGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp GCTCGGGCGCCCCGTACAGCCCATCCTCCACCAACCGCAGGCGGTAGCGGAAGCCCGTCCAGGAGCCGTTaGGCTCGGGCGCCCCGTACA +
Preference number: 4 (lower is better)
Translates to: ARAPRTAHPPPTAGGSGSPSRSR*ARAPRT
Trigger: TGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGG...GCTTCCGCTACCGCCTGCGGTTGGTGGAGGATGGGCTGTACGGGGCGCCCGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp GGGCGCAGGCGGGCTCCAGAGCCAGGCCTCGGACTTCGCGGGGAACCAAAGGCAACAGCGCCCGGGGCATaGTCTCCGAGCCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GRRRAPEPGLGLRGEPKATAPGA*SPSPAA
Trigger: TGCAGCAGGGCTCGGAGATCATGCCCCGGGCGCTGT...TGCCTTTGGTTCCCCGCGAAGTCCGAGGCCTGGCTCTGGAGCCCGCCTGCGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp CCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGCGGGAGCGGAGACTGTATTCCAACAGGGGCTaGGATGTGGCAAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PGRRRTSPVPRPLRERRLYSNRG*DVARGG
Trigger: CCCTCCCCTTGCCACATCGCAGCCCCTGTTGGAATA...CAGTCTCCGCTCCCGCAGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp GGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGCGGGAGCGGAGACTGCTTCCGTGGTCTCGTACTaGCTGTCCCGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GAPAHKSCPAPAAGAETASVVSY*LSRCSS
Trigger: TGAGCTGCAGCGGGACAGCCAGTACGAGACCACGGA...AGCAGTCTCCGCTCCCGCAGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp CCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGCGGGAGCGGAGACTGACCCCAATCTCACGGTaGCCCTGCCGGGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: PGRRRTSPVPRPLRERRLTPISR*PCRDFS
Trigger: AGAAAAGTCCCGGCAGGGCCACCGTGAGATTGGGGT...CAGTCTCCGCTCCCGCAGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp GCGCAGGCGGGCTCCAGAGCCAGGCCTCGGACTTCGCGGGGAACCAAAGGCAAATGGCAGACGCGCACGTaGGTGCAGGGGGTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: AQAGSRARPRTSRGTKGKWQTRT*VQGVGA
Trigger: CGCCCCCACCCCCTGCACCCACGTGCGCGTCTGCCA...TTTGCCTTTGGTTCCCCGCGAAGTCCGAGGCCTGGCTCTGGAGCCCGCCTGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp TCCCCAGCCCCTGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCGAAGTCCCCAGCCCCTaGAGTCCTCGGTTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: SPAPGVLGSCALLARGTLEVPSP*SPRFLR
Trigger: GCGCAGGAACCGAGGACTCCAGGGGCTGGGGACTTC...GAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCAGGGGCTGGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp GGCAAAATCGCGGCGTCCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTCCTCGGGACCCACCTTaGTGTGGGGGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GKIAASGAPAHKSCPAPAPRDPP*CGGSPS
Trigger: AGAAGGAGATCCCCCACATCAAGGTGGGTCCCGAGG...AGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCCGGACGCCGCGATTTTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp GGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGCGGGAGCGGAGACTGCTCCCTCCAGGACATGTTaGGGCTGCGGACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: GAPAHKSCPAPAAGAETAPSRTC*GCGQTQ
Trigger: CTGAGTTTGTCCGCAGCCTCAACATGTCCTGGAGGG...AGCAGTCTCCGCTCCCGCAGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp TGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCCACCCACCAGACTCCGCTaGCACAGCGCGTGGACAGCG +
Preference number: 4 (lower is better)
Translates to: WSPRFLRPSRPRHPLASPPTRLR*HSAWTA
Trigger: CGCTGTCCACGCGCTGTGTCAGCGGAGTCTGGTGGG...TGGACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp GGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGCGGGAGCGGAGACTGCTATGATCCCGTTGATCTaGTCCCGGGCCAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GAPAHKSCPAPAAGAETAMIPLI*SRAKAK
Trigger: CTTGGCCTTGGCCCGGGAGCAGATCAACGGGATCAT...AGCAGTCTCCGCTCCCGCAGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp CCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGCGGGAGCGGAGACTGAGCCGGCGTGGATGGTaGCATACTCGATGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: PGRRRTSPVPRPLRERRLSRRGW*HTRCWS
Trigger: AGACCAACATCGAGTATGGCACCATCCACGCCGGCT...CAGTCTCCGCTCCCGCAGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp ATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCGAGGCCCGCAGCGCCTaGATGCGCCGGCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: MGSSPLTAFRFPEPPPKSEARSA*MRRHSW
Trigger: CCAGGAGTGCCGGCGCATCCAGGCGCTGCGGGCCTC...GGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp CGGGCTCCAGAGCCAGGCCTCGGACTTCGCGGGGAACCAAAGGCAAAATCGCGGGAGACTGCTGGGGCCTaGGGCGGGCCCCGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RAPEPGLGLRGEPKAKSRETAGA*GGPRPF
Trigger: GAAGGGACGGGGCCCGCCCCAGGCCCCAGCAGTCTC...CCGCGATTTTGCCTTTGGTTCCCCGCGAAGTCCGAGGCCTGGCTCTGGAGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp CGCCAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATGGGAGACCGCCAAGCTaGCGTCCTCGTTACTGGGGT +
Preference number: 4 (lower is better)
Translates to: RQPCPSRSRWARAPRTAHGRPPS*RPRYWG
Trigger: ACCCCAGTAACGAGGACGTCAGCTTGGCGGTCTCCC...ATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp GGCAAAATCGCGGCGTCCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGTGTCTGCGACAGGTTaGTGTCCAGGGTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: GKIAASGAPAHKSCPAPAVSATG*CPGWWH
Trigger: ATGCCACCACCCTGGACATCAACCTGTCGCAGACAC...AGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCCGGACGCCGCGATTTTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp TCCCCAGCCCCTGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCAGTTGGGCCGGCGCATaGCGTATGGGTTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SPAPGVLGSCALLARGTLSWAGA*RMGSPG
Trigger: TCCTGGAGAACCCATACGTCATGCGCCGGCCCAACT...GAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCAGGGGCTGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp CCTGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCTGGGGTCCTCTCCGCTaGCTGCTTTCCGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PGVLGSCALLARGTLSRVWGPLR*LLSASQ
Trigger: CTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCA...GACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp CTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCCCAGCCCCCACGGTGGAGGCAGATaGTGGGCTAGAGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LSADCFPLPRAAPEVPSPHGGGR*WARGGP
Trigger: GGGCCCTCCTCTAGCCCAGCATCTGCCTCCACCGTG...GGGGCTGGGGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp GAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCCACTGGGAGCCCAGCGGCATaGCAATGCCGTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: ESSVPAPFSPAAPSRESTGSPAA*QCRSPW
Trigger: CCAAGGGCTACGGCATTGGCATGCCGCTGGGCTCCC...AGTGGACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp GGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGCGGGAGCGGAGACTGCTCCGGCGCATGACGTATaGGTTCTCCAGGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: GAPAHKSCPAPAAGAETAPAHDV*VLQDGC
Trigger: ACAACCATCCTGGAGAACCCATACGTCATGCGCCGG...AGCAGTCTCCGCTCCCGCAGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp GGGCGCAGGCGGGCTCCAGAGCCAGGCCTCGGACTTCGCGGGGAACCAAAGGCACGGCAAGAAACGGCGTaGCGCAGCTCCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: GRRRAPEPGLGLRGEPKARQETA*RSSCSI
Trigger: GATGCTGCAGGAGCTGCGCCACGCCGTTTCTTGCCG...TGCCTTTGGTTCCCCGCGAAGTCCGAGGCCTGGCTCTGGAGCCCGCCTGCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp ATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCGCACAGCCCCGCCCGTaGTCACTCGTGCTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: MGSSPLTAFRFPEPPPKSAQPRP*SLVLRQ
Trigger: CTGGCGGAGCACGAGTGACCACGGGCGGGGCTGTGC...GGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp CCTGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCTCTGCCCTTTGCTGTTaGACTCGACCCGCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: PGVLGSCALLARGTLSRVSALCC*TRPARS
Trigger: TGACCGGGCGGGTCGAGTTCAACAGCAAAGGGCAGA...GACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp GCGCAGGCGGGCTCCAGAGCCAGGCCTCGGACTTCGCGGGGAACCAAAGGCAAAAGGCGTAGCGGGAGTTaGGGACGCGGGCAATGCCCT +
Preference number: 4 (lower is better)
Translates to: AQAGSRARPRTSRGTKGKRRSGS*GRGQCP
Trigger: AGGGCATTGCCCGCGTCCTCAACTCCCGCTACGCCT...TTTGCCTTTGGTTCCCCGCGAAGTCCGAGGCCTGGCTCTGGAGCCCGCCTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp CTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCCCAGCCCCGCAGGATGGCCAGTGTaGTCTCATCCCGGAACGGGG +
Preference number: 4 (lower is better)
Translates to: LSADCFPLPRAAPEVPSPAGWPV*SHPGTG
Trigger: CCCCGTTCCGGGATGAGATCACACTGGCCATCCTGC...GGGGCTGGGGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp CGCCAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATGGATTGACTGGCACCTaGTGCAGGCCTTGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: RQPCPSRSRWARAPRTAHGLTGT*CRPWGV
Trigger: GACTCCCCAAGGCCTGCATCAGGTGCCAGTCAATCC...ATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR GCA 90 bp CCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGCGGGAGCGGAGACTGGGGACTTTTCTAGGATaGGCAGGGTGTAGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: PGRRRTSPVPRPLRERRLGTFLG*AGCSWF
Trigger: GAACCAACTACACCCTGCGCATCCTAGAAAAGTCCC...CAGTCTCCGCTCCCGCAGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp ATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCCAGGATGTGGGGGCGTaGCCGCAGGCATGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: MGSSPLTAFRFPEPPPKSQDVGA*PQAWVW
Trigger: CCACACCCATGCCTGCGGGCACGCCCCCACATCCTG...GGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp GCGCAGGCGGGCTCCAGAGCCAGGCCTCGGACTTCGCGGGGAACCAAAGGCAAAGCGTGGCGCAGCTCCTaGAGCATCTCCTGGCACACC +
Preference number: 4 (lower is better)
Translates to: AQAGSRARPRTSRGTKGKAWRSS*SISWHT
Trigger: GGTGTGCCAGGAGATGCTGCAGGAGCTGCGCCACGC...TTTGCCTTTGGTTCCCCGCGAAGTCCGAGGCCTGGCTCTGGAGCCCGCCTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp TGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCCAGGGAACGCGACGTCTTaGGGCAAGAAACGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: WSPRFLRPSRPRHPLASPGNATS*GKKRRG
Trigger: GCCACGCCGTTTCTTGCCGCAAGACGTCGCGTTCCC...TGGACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp GGCAAAATCGCGGCGTCCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTCAGTTGAGGCGCCGGTaGTATTCGTTCATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: GKIAASGAPAHKSCPAPAQLRRR*YSFMVD
Trigger: GTCCACCATGAACGAATACCACCGGCGCCTCAACTG...AGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCCGGACGCCGCGATTTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
3UTR CAA 72 bp TTGATGAGCTCGCCAACCATGCCCGTCCAGGAGCCGTaGGGCTCGGGCGCCCCGTACAGCCCATCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LMSSPTMPVQEP*GSGAPYSPSST
Trigger: GGTGGAGGATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTGGCGAGCTCATCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp CCTGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCTACTGGGGTACAGGCTaGCAGACGCGAAGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: PGVLGSCALLARGTLSRVYWGTG*QTRSEG
Trigger: ACCTTCGCTTCGCGTCTGTCAGCCTGTACCCCAGTA...GACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp AACCAAAGGCAAAATCGCGGCGTCCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGGGAGACCGCCAAGCTaGCGTCCTCGTTACTGGGGT +
Preference number: 4 (lower is better)
Translates to: NQRQNRGVRGAGAQVLSRGRPPS*RPRYWG
Trigger: ACCCCAGTAACGAGGACGTCAGCTTGGCGGTCTCCC...GCGGGACAGGACTTGTGCGCCGGCGCCCCGGACGCCGCGATTTTGCCTTTGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp CCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGCGGGAGCGGAGACTGGTACTTGTAAAACGCTaGGGTCATTCCCAGTTCCGA +
Preference number: 4 (lower is better)
Translates to: PGRRRTSPVPRPLRERRLVLVKR*GHSQFR
Trigger: TCGGAACTGGGAATGACCTCAGCGTTTTACAAGTAC...CAGTCTCCGCTCCCGCAGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp GCGCAGGCGGGCTCCAGAGCCAGGCCTCGGACTTCGCGGGGAACCAAAGGCAAAAAACATCAGGGCGGCTaGCAGCGCAGGGCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: AQAGSRARPRTSRGTKGKKHQGG*QRRAQV
Trigger: TACCTGGGCCCTGCGCTGTCAGCCGCCCTGATGTTT...TTTGCCTTTGGTTCCCCGCGAAGTCCGAGGCCTGGCTCTGGAGCCCGCCTGCGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp CAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATCCTCAGGGCCCAGGTAGGTaGTGGCTTCACAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QPCPSRSRWARAPRTAHPQGPGR*WLHSSP
Trigger: GGGAGAACTGTGAAGCCAGCACCTACCTGGGCCCTG...AGGATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR GCA 90 bp TCCACGCAGAAGCCCTCGAAGCGTTCGTTCCCCGACAGGGCCTGGAAGTTGGGCCAGGATGTGGGGGCGTaGCCGCAGGCATGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: STQKPSKRSFPDRAWKLGQDVGA*PQAWVW
Trigger: CCACACCCATGCCTGCGGGCACGCCCCCACATCCTG...GCCCAACTTCCAGGCCCTGTCGGGGAACGAACGCTTCGAGGGCTTCTGCGTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR GCA 90 bp GGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGCGGGAGCGGAGACTGCTGCATGTAGTTCCACATaGGCTGGTACGTTTGGTACC +
Preference number: 4 (lower is better)
Translates to: GAPAHKSCPAPAAGAETAACSST*AGTFGT
Trigger: GGTACCAAACGTACCAGCGCATGTGGAACTACATGC...AGCAGTCTCCGCTCCCGCAGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp AGCCTGAGCAGTCCCAGAATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGCCCGTGGTCACTCGTaGTCCGCCAGCTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SLSSPRMGSSPLTAFRFPARGHS*SASSRG
Trigger: CCCCCGGGAGCTGGCGGAGCACGAGTGACCACGGGC...TGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATTCTGGGACTGCTCAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp CCTGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCTTCACACCGATCTCCTaGCTGCGGTTCAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PGVLGSCALLARGTLSRVFTPIS*LRFSSR
Trigger: CCGAGAGCTGAACCGCAGCCAGGAGATCGGTGTGAA...GACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp ATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCTTCCCCGACAGGGCCTaGAAGTTGGGCCGGCGCATG +
Preference number: 4 (lower is better)
Translates to: MGSSPLTAFRFPEPPPKSFPDRA*KLGRRM
Trigger: CATGCGCCGGCCCAACTTCCAGGCCCTGTCGGGGAA...GGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp GAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCCACTGCGTGCCCGCAGGCATaGGTGTGGGTTATACCACTC +
Preference number: 4 (lower is better)
Translates to: ESSVPAPFSPAAPSRESTACPQA*VWVIPL
Trigger: GAGTGGTATAACCCACACCCATGCCTGCGGGCACGC...AGTGGACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp CCTGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCTGGAGCCGGCGTGGATaGTGCCATACTCGATGTTGG +
Preference number: 4 (lower is better)
Translates to: PGVLGSCALLARGTLSRVWSRRG*CHTRCW
Trigger: CCAACATCGAGTATGGCACCATCCACGCCGGCTCCA...GACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp AGCCTGAGCAGTCCCAGAATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCACTCTCGCGAGTCCACTaGGGGGCGCAGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLSSPRMGSSPLTAFRFPLSRVH*GAQAGS
Trigger: GGAGCCCGCCTGCGCCCCCCAGTGGACTCGCGAGAG...TGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATTCTGGGACTGCTCAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp CTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCCCAGCCCCGCGTCTCCTTGGAGATaGGGAAGCCACGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: LSADCFPLPRAAPEVPSPASPWR*GSHAPV
Trigger: AACTGGTGCGTGGCTTCCTCATCTCCAAGGAGACGC...GGGGCTGGGGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp GGGCGCAGGCGGGCTCCAGAGCCAGGCCTCGGACTTCGCGGGGAACCAAAGGCAATCTCACGGTGGCCCTaGCGGGACTTTTCTAGGATG +
Preference number: 4 (lower is better)
Translates to: GRRRAPEPGLGLRGEPKAISRWP*RDFSRM
Trigger: CATCCTAGAAAAGTCCCGGCAGGGCCACCGTGAGAT...TGCCTTTGGTTCCCCGCGAAGTCCGAGGCCTGGCTCTGGAGCCCGCCTGCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp AACCAAAGGCAAAATCGCGGCGTCCGGGGCGCCGGCGCACAAGTCCTGTCCCGCAGAGCACCTGGCAGCTaGGGCTGGCGAAGGCAACAA +
Preference number: 4 (lower is better)
Translates to: NQRQNRGVRGAGAQVLSRRAPGS*GWRRQQ
Trigger: TTGTTGCCTTCGCCAGCCCCAGCTGCCAGGTGCTCT...GCGGGACAGGACTTGTGCGCCGGCGCCCCGGACGCCGCGATTTTGCCTTTGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp CCTGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCGGACCCACCTTGATGTaGGGGATCTCCTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PGVLGSCALLARGTLSRVGPTLM*GISFSP
Trigger: TGGAGAGAAGGAGATCCCCCACATCAAGGTGGGTCC...GACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp TGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCCACGTGGGGCCAAATGTTaGCCGATGTACAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: WSPRFLRPSRPRHPLASPRGAKC*PMYRPE
Trigger: CTCTGGCCTGTACATCGGCCAACATTTGGCCCCACG...TGGACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp TGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCCACCACCAGGGTCTTGTTaGCCAGTGTCTGCGACAGGT +
Preference number: 4 (lower is better)
Translates to: WSPRFLRPSRPRHPLASPPPGSC*PVSATG
Trigger: ACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGG...TGGACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp TGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCCAATGGTGGAGCCGGCGTaGATGGTGCCATACTCGATG +
Preference number: 4 (lower is better)
Translates to: WSPRFLRPSRPRHPLASPMVEPA*MVPYSM
Trigger: CATCGAGTATGGCACCATCCACGCCGGCTCCACCAT...TGGACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp GGGGAGCCTGAGCAGTCCCAGAATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTATGCGCCGGCACTCCTaGCAGACGCGCACGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GEPEQSQNGVLSADCFPLMRRHS*QTRTWV
Trigger: CACCCACGTGCGCGTCTGCCAGGAGTGCCGGCGCAT...AAGCGGAAAGCAGTCAGCGGAGAGGACCCCATTCTGGGACTGCTCAGGCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp AACCAAAGGCAAAATCGCGGCGTCCGGGGCGCCGGCGCACAAGTCCTGTCCCGCAGAAGTAGCCAGGCTTaGGGCCCATGTGCACTCGGT +
Preference number: 4 (lower is better)
Translates to: NQRQNRGVRGAGAQVLSRRSSQA*GPCALG
Trigger: ACCGAGTGCACATGGGCCGCAAGCCTGGCTACTTCT...GCGGGACAGGACTTGTGCGCCGGCGCCCCGGACGCCGCGATTTTGCCTTTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGACAGGATGTGGGGGCGTaGCCGCAGGCATGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: AWGERETQRGSLGRSDRRQDVGA*PQAWVW
Trigger: CCACACCCATGCCTGCGGGCACGCCCCCACATCCTG...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp GCTCGGGCGCCCCGTACAGCCCATCCTCCACCAACCGCAGGCGGTAGCGGAAGCGAAACCACAGGCTGTTaGCCAGCGTGTACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: ARAPRTAHPPPTAGGSGSETTGC*PACTGS
Trigger: AGAACCAGTACACGCTGGGCAACAGCCTGTGGTTTC...GCTTCCGCTACCGCCTGCGGTTGGTGGAGGATGGGCTGTACGGGGCGCCCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR GCA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGAGGCACCTCCATGCGCTaGACGGTGAGGAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: AWGERETQRGSLGRSDRRGTSMR*TVRKAA
Trigger: GGCCGCCTTCCTCACCGTGCAGCGCATGGAGGTGCC...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp GGCAAAATCGCGGCGTCCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGTAAGATCTGACACATaGTGTCCGTGGTCTCGTACT +
Preference number: 4 (lower is better)
Translates to: GKIAASGAPAHKSCPAPAVRSDT*CPWSRT
Trigger: AGTACGAGACCACGGACACCATGTGTCAGATCTTAC...AGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCCGGACGCCGCGATTTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp TCCCCAGCCCCTGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCAGAAGCCCAGGATGTTaGAGGAGTCCTCCACAATAC +
Preference number: 4 (lower is better)
Translates to: SPAPGVLGSCALLARGTLRSPGC*RSPPQY
Trigger: GTATTGTGGAGGACTCCTCCAACATCCTGGGCTTCT...GAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCAGGGGCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp ATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCCATAGGGGCTCAGCCTaGCAGCCAGAAACAGGACGC +
Preference number: 4 (lower is better)
Translates to: MGSSPLTAFRFPEPPPKSHRGSA*QPETGR
Trigger: GCGTCCTGTTTCTGGCTGCCAGGCTGAGCCCCTATG...GGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp AATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCTGGTTCTCCAGGATGTaGGGGCGTGCCCGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: NGVLSADCFPLPRAAPEVWFSRM*GRARRH
Trigger: ATGCCTGCGGGCACGCCCCCACATCCTGGAGAACCA...GACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp GGCACCAGGGGACACCCATCTGTCCAGAGGCCCTCCCCACCTCCAGAAGCGTGGTTGCCCAGCGTGTACTaGTTCTCCAGGATGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GTRGHPSVQRPSPPPEAWLPSVY*FSRMWG
Trigger: CCCCCACATCCTGGAGAACCAGTACACGCTGGGCAA...CCACGCTTCTGGAGGTGGGGAGGGCCTCTGGACAGATGGGTGTCCCCTGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
3UTR CAA 72 bp CCCTCGAAGCGTTCGTTCCCCGACAGGGCCTGGAAGTaGGGCCGGCGCATGACGTATGGGTTCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PSKRSFPDRAWK*GRRMTYGFSRM
Trigger: CATCCTGGAGAACCCATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTCGGGGAACGAACGCTTCGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp ATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCCGGCCACACACTGTCTaGTCATCCAGGATTGCAGCC +
Preference number: 4 (lower is better)
Translates to: MGSSPLTAFRFPEPPPKSRPHTV*SSRIAA
Trigger: GGCTGCAATCCTGGATGATCAGACAGTGTGTGGCCG...GGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp CTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCCCAGCCCCCCTTTGGGTAAGATCTaGCACATGGTGTCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: LSADCFPLPRAAPEVPSPPLGKI*HMVSVV
Trigger: GACCACGGACACCATGTGTCAGATCTTACCCAAAGG...GGGGCTGGGGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp GGCCACAGCCAGGTCTGCCTTCCGGTTGATGAGCTCGCCAACCATGCCCGTCCACCTCGGGACCCACCTTaGTGTGGGGGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GHSQVCLPVDELANHARPPRDPP*CGGSPS
Trigger: AGAAGGAGATCCCCCACATCAAGGTGGGTCCCGAGG...TGGACGGGCATGGTTGGCGAGCTCATCAACCGGAAGGCAGACCTGGCTGTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp GGGGAGCCTGAGCAGTCCCAGAATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTGCGAAGCGAAGGTACTaGAGGCGGGGTGTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GEPEQSQNGVLSADCFPLAKRRY*RRGVSS
Trigger: CGAGGAGACACCCCGCCTTCAGTACCTTCGCTTCGC...AAGCGGAAAGCAGTCAGCGGAGAGGACCCCATTCTGGGACTGCTCAGGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp CAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATCCTGTCCAACATCCTCACTaGCAGCGTCTCCTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: QPCPSRSRWARAPRTAHPVQHPH*QRLLGD
Trigger: ATCTCCAAGGAGACGCTGTCAGTGAGGATGTTGGAC...AGGATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp ATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCAGGGGTGGGACGTGTTaGACATGGAGAAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: MGSSPLTAFRFPEPPPKSRGGTC*TWRSPG
Trigger: TCCTGGGCTTCTCCATGTTCAACACGTCCCACCCCT...GGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGAAGGCGTAGCGGGAGTTaGGGACGCGGGCAATGCCCT +
Preference number: 4 (lower is better)
Translates to: AWGERETQRGSLGRSDRRRRSGS*GRGQCP
Trigger: AGGGCATTGCCCGCGTCCTCAACTCCCGCTACGCCT...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp CGGGCTCCAGAGCCAGGCCTCGGACTTCGCGGGGAACCAAAGGCAAAATCGCGGCTCCTCGGACTCAGCTaGCCTCCGTGTGGACCATAT +
Preference number: 4 (lower is better)
Translates to: RAPEPGLGLRGEPKAKSRLLGLS*PPCGPY
Trigger: ATATGGTCCACACGGAGGTCAGCTGAGTCCGAGGAG...CCGCGATTTTGCCTTTGGTTCCCCGCGAAGTCCGAGGCCTGGCTCTGGAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp AGCCTGAGCAGTCCCAGAATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAAGAGCTTGCCGTTGCTaGGGCGCATCTCGCGGACCG +
Preference number: 4 (lower is better)
Translates to: SLSSPRMGSSPLTAFRFPRACRC*GASRGP
Trigger: CGGTCCGCGAGATGCGCCTCAGCAACGGCAAGCTCT...TGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATTCTGGGACTGCTCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp GGCACCAGGGGACACCCATCTGTCCAGAGGCCCTCCCCACCTCCAGAAGCGTGGCCAGGATTGCAGCCATaGGCAGTGATGAGAGCACCT +
Preference number: 4 (lower is better)
Translates to: GTRGHPSVQRPSPPPEAWPGLQP*AVMRAP
Trigger: AGGTGCTCTCATCACTGCGCATGGCTGCAATCCTGG...CCACGCTTCTGGAGGTGGGGAGGGCCTCTGGACAGATGGGTGTCCCCTGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp GCTCGGGCGCCCCGTACAGCCCATCCTCCACCAACCGCAGGCGGTAGCGGAAGCACAATACCGTCCAGATaGAGGATGGGGAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: ARAPRTAHPPPTAGGSGSTIPSR*RMGKSM
Trigger: CATGGACTTCCCCATCCTGCATCTGGACGGTATTGT...GCTTCCGCTACCGCCTGCGGTTGGTGGAGGATGGGCTGTACGGGGCGCCCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR GCA 90 bp AATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCAGGGCCCAGGTAGGTaGTGGCTTCACAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: NGVLSADCFPLPRAAPEVQGPGR*WLHSSP
Trigger: GGGAGAACTGTGAAGCCAGCACCTACCTGGGCCCTG...GACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp CTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCCCAGCCCCGAAACCACAGGCTGTTaGCCAGCGTGTACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LSADCFPLPRAAPEVPSPETTGC*PACTGS
Trigger: AGAACCAGTACACGCTGGGCAACAGCCTGTGGTTTC...GGGGCTGGGGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp AACCAAAGGCAAAATCGCGGCGTCCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGATGTTGGTCTGATCTaGCAGGTCATCGGCCGACTC +
Preference number: 4 (lower is better)
Translates to: NQRQNRGVRGAGAQVLSRDVGLI*QVIGRL
Trigger: GAGTCGGCCGATGACCTGGCAGATCAGACCAACATC...GCGGGACAGGACTTGTGCGCCGGCGCCCCGGACGCCGCGATTTTGCCTTTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGAGGGAGCCCAGCGGCATaGCAATGCCGTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: AWGERETQRGSLGRSDRRGSPAA*QCRSPW
Trigger: CCAAGGGCTACGGCATTGGCATGCCGCTGGGCTCCC...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp AATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCCTGGCAGCTGGGGCTaGCGAAGGCAACAATCAGCA +
Preference number: 4 (lower is better)
Translates to: NGVLSADCFPLPRAAPEVPGSWG*RRQQSA
Trigger: TGCTGATTGTTGCCTTCGCCAGCCCCAGCTGCCAGG...GACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp AATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCAGTGATGAGAGCACCTaGCAGCTGGGGCTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: NGVLSADCFPLPRAAPEVSDEST*QLGLAK
Trigger: CTTCGCCAGCCCCAGCTGCCAGGTGCTCTCATCACT...GACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp ATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCGACACATGGTGTCCGTaGTCTCGTACTGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: MGSSPLTAFRFPEPPPKSDTWCP*SRTGCP
Trigger: GGGACAGCCAGTACGAGACCACGGACACCATGTGTC...GGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp AATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCGGCCCAGGTAGGTGCTaGCTTCACAGTTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: NGVLSADCFPLPRAAPEVGPGRC*LHSSPS
Trigger: GGAGGGAGAACTGTGAAGCCAGCACCTACCTGGGCC...GACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGTTCCCCGACAGGGCCTaGAAGTTGGGCCGGCGCATG +
Preference number: 4 (lower is better)
Translates to: RAWGERETQRGSLGRSDRFPDRA*KLGRRM
Trigger: CATGCGCCGGCCCAACTTCCAGGCCCTGTCGGGGAA...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp AATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCTCCTGCAGCATCTCCTaGCACACCGACACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: NGVLSADCFPLPRAAPEVSCSIS*HTDTSS
Trigger: CGAGGAGGTGTCGGTGTGCCAGGAGATGCTGCAGGA...GACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp AACCAAAGGCAAAATCGCGGCGTCCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGTCCAACATCCTCACTaGCAGCGTCTCCTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: NQRQNRGVRGAGAQVLSRVQHPH*QRLLGD
Trigger: ATCTCCAAGGAGACGCTGTCAGTGAGGATGTTGGAC...GCGGGACAGGACTTGTGCGCCGGCGCCCCGGACGCCGCGATTTTGCCTTTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp GGCCACAGCCAGGTCTGCCTTCCGGTTGATGAGCTCGCCAACCATGCCCGTCCAGTGTCTGCGACAGGTTaGTGTCCAGGGTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: GHSQVCLPVDELANHARPVSATG*CPGWWH
Trigger: ATGCCACCACCCTGGACATCAACCTGTCGCAGACAC...TGGACGGGCATGGTTGGCGAGCTCATCAACCGGAAGGCAGACCTGGCTGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR GCA 90 bp TGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCCATACTGGCTGTCCCGCTaGAGCTCAAAGATGTCTACT +
Preference number: 4 (lower is better)
Translates to: WSPRFLRPSRPRHPLASPYWLSR*SSKMST
Trigger: AGTAGACATCTTTGAGCTGCAGCGGGACAGCCAGTA...TGGACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp CAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATCCTTACTGGCTGTCCCGCTaGAGCTCAAAGATGTCTACT +
Preference number: 4 (lower is better)
Translates to: QPCPSRSRWARAPRTAHPYWLSR*SSKMST
Trigger: AGTAGACATCTTTGAGCTGCAGCGGGACAGCCAGTA...AGGATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR GCA 90 bp CTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCCCAGCCCCACAATACCGTCCAGATaGAGGATGGGGAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: LSADCFPLPRAAPEVPSPTIPSR*RMGKSM
Trigger: CATGGACTTCCCCATCCTGCATCTGGACGGTATTGT...GGGGCTGGGGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp AACCAAAGGCAAAATCGCGGCGTCCGGGGCGCCGGCGCACAAGTCCTGTCCCGCTTGTTGGCCAGTGTCTaGGACAGGTTGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: NQRQNRGVRGAGAQVLSRLLASV*DRLMSR
Trigger: CCTGGACATCAACCTGTCGCAGACACTGGCCAACAA...GCGGGACAGGACTTGTGCGCCGGCGCCCCGGACGCCGCGATTTTGCCTTTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR GCA 90 bp CCCGACAGGGCCTGGAAGTTGGGCCGGCGCATGACGTATGGGTTCTCCAGGATGAGAAGTAGCCAGGCTTaGGGCCCATGTGCACTCGGT +
Preference number: 4 (lower is better)
Translates to: PDRAWKLGRRMTYGFSRMRSSQA*GPCALG
Trigger: ACCGAGTGCACATGGGCCGCAAGCCTGGCTACTTCT...CATCCTGGAGAACCCATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp GGCCACAGCCAGGTCTGCCTTCCGGTTGATGAGCTCGCCAACCATGCCCGTCCACCACCAGGGTCTTGTTaGCCAGTGTCTGCGACAGGT +
Preference number: 4 (lower is better)
Translates to: GHSQVCLPVDELANHARPPPGSC*PVSATG
Trigger: ACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGG...TGGACGGGCATGGTTGGCGAGCTCATCAACCGGAAGGCAGACCTGGCTGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp GCTGACGTCCTCGTTACTGGGGTACAGGCTGACAGACGCGAAGCGAAGGTACTGTTCCCCGACAGGGCCTaGAAGTTGGGCCGGCGCATG +
Preference number: 4 (lower is better)
Translates to: ADVLVTGVQADRREAKVLFPDRA*KLGRRM
Trigger: CATGCGCCGGCCCAACTTCCAGGCCCTGTCGGGGAA...CAGTACCTTCGCTTCGCGTCTGTCAGCCTGTACCCCAGTAACGAGGACGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp TGGAGAAAGACCGAGAAGAGAAGCAGTCTAAGGACTGAGCCCTGGAGCCCCACACCGTCCAGGAGCCGTTaGGCTCGGGCGCCCCGTACA +
Preference number: 4 (lower is better)
Translates to: WRKTEKRSSLRTEPWSPTPSRSR*ARAPRT
Trigger: TGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGG...TGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTTCTCTTCTCGGTCTTTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGTGGTTCTCCAGGATGTaGGGGCGTGCCCGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: RAWGERETQRGSLGRSDRWFSRM*GRARRH
Trigger: ATGCCTGCGGGCACGCCCCCACATCCTGGAGAACCA...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGACCTCGGGACCCACCTTaGTGTGGGGGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AWGERETQRGSLGRSDRRPRDPP*CGGSPS
Trigger: AGAAGGAGATCCCCCACATCAAGGTGGGTCCCGAGG...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp GGCCAAATGTTGGCCGATGTACAGGCCAGAGGCTTCACACCGATCTCCTGGCTGGCGAAGCGAAGGTACTaGAGGCGGGGTGTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GQMLADVQARGFTPISWLAKRRY*RRGVSS
Trigger: CGAGGAGACACCCCGCCTTCAGTACCTTCGCTTCGC...CAGCCAGGAGATCGGTGTGAAGCCTCTGGCCTGTACATCGGCCAACATTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp TTGTTGGCCAGTGTCTGCGACAGGTTGATGTCCAGGGTGGTGGCATTCATGGCCCAGCCTTGGCGCAGATaGGGCTGGCCGAGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: LLASVCDRLMSRVVAFMAQPWRR*GWPRGS
Trigger: ACTACCCCTCGGCCAGCCTCATCTGCGCCAAGGCTG...GGCCATGAATGCCACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp GAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCCACTGGAAGTCCATGGTGGTaGGGATGTACTTGTAAAACG +
Preference number: 4 (lower is better)
Translates to: ESSVPAPFSPAAPSRESTGSPWW*GCTCKT
Trigger: CGTTTTACAAGTACATCCTCACCACCATGGACTTCC...AGTGGACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp AATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCTCTCCAGGATGGTTGTaGCCACCAGGGTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: NGVLSADCFPLPRAAPEVSPGWL*PPGSCW
Trigger: CCAACAAGACCCTGGTGGTCACAACCATCCTGGAGA...GACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGAAGTTGGGCCGGCGCATaGCGTATGGGTTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AWGERETQRGSLGRSDRRSWAGA*RMGSPG
Trigger: TCCTGGAGAACCCATACGTCATGCGCCGGCCCAACT...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp AAATGTTGGCCGATGTACAGGCCAGAGGCTTCACACCGATCTCCTGGCTGCGGTCACGGTGGAGGCAGATaGTGGGCTAGAGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: KCWPMYRPEASHRSPGCGHGGGR*WARGGP
Trigger: GGGCCCTCCTCTAGCCCAGCATCTGCCTCCACCGTG...ACCGCAGCCAGGAGATCGGTGTGAAGCCTCTGGCCTGTACATCGGCCAACATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR GCA 90 bp AGCCTGAGCAGTCCCAGAATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGCGCTCACCACCACGTaGACGGCGTCAAACATCAGG +
Preference number: 4 (lower is better)
Translates to: SLSSPRMGSSPLTAFRFPALTTT*TASNIR
Trigger: CCTGATGTTTGACGCCGTGCACGTGGTGGTGAGCGC...TGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATTCTGGGACTGCTCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGTGATGAGAGCACCTaGCAGCTGGGGCTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: RAWGERETQRGSLGRSDRSDEST*QLGLAK
Trigger: CTTCGCCAGCCCCAGCTGCCAGGTGCTCTCATCACT...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp GAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCCACTCAGACACAACCCCTTTaGGTAAGATCTGACACATGG +
Preference number: 4 (lower is better)
Translates to: ESSVPAPFSPAAPSRESTQTQPL*VRSDTW
Trigger: CCATGTGTCAGATCTTACCCAAAGGGGTTGTGTCTG...AGTGGACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGGGCCCAGGTAGGTGCTaGCTTCACAGTTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: RAWGERETQRGSLGRSDRGPGRC*LHSSPS
Trigger: GGAGGGAGAACTGTGAAGCCAGCACCTACCTGGGCC...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp GGGGAGCCTGAGCAGTCCCAGAATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTATGAGGCTGGTCCCGTaGGGCCAAATGTTGGCCGAT +
Preference number: 4 (lower is better)
Translates to: GEPEQSQNGVLSADCFPLMRLVP*GQMLAD
Trigger: ATCGGCCAACATTTGGCCCCACGGGACCAGCCTCAT...AAGCGGAAAGCAGTCAGCGGAGAGGACCCCATTCTGGGACTGCTCAGGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp ATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCTGCGCAGGGTGTAGTTaGTTCTCTGCCCTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: MGSSPLTAFRFPEPPPKSCAGCS*FSALCC
Trigger: ACAGCAAAGGGCAGAGAACCAACTACACCCTGCGCA...GGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGACATAGGGGCTCAGCCTaGCAGCCAGAAACAGGACGC +
Preference number: 4 (lower is better)
Translates to: AWGERETQRGSLGRSDRRHRGSA*QPETGR
Trigger: GCGTCCTGTTTCTGGCTGCCAGGCTGAGCCCCTATG...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp AGGCTTCACACCGATCTCCTGGCTGCGGTTCAGCTCTCGGACAGCGCTCACCACTTGCCCAGCGTGTACTaGTTCTCCAGGATGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RLHTDLLAAVQLSDSAHHLPSVY*FSRMWG
Trigger: CCCCCACATCCTGGAGAACCAGTACACGCTGGGCAA...GTGGTGAGCGCTGTCCGAGAGCTGAACCGCAGCCAGGAGATCGGTGTGAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp AGCCTGAGCAGTCCCAGAATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCACCACCTCCAGAAGCGTaGGGGGCTGCGTCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SLSSPRMGSSPLTAFRFPPPPEA*GAASSL
Trigger: AAGACTTGACGCAGCCCCCCACGCTTCTGGAGGTGG...TGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATTCTGGGACTGCTCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGCTTGAGAAGGCAACCTaGACACGGGTGGAGGGCACC +
Preference number: 4 (lower is better)
Translates to: RAWGERETQRGSLGRSDRLEKAT*TRVEGT
Trigger: GGTGCCCTCCACCCGTGTCCAGGTTGCCTTCTCAAG...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp TGGTCCCGTGGGGCCAAATGTTGGCCGATGTACAGGCCAGAGGCTTCACACCGACGGCCACACACTGTCTaGTCATCCAGGATTGCAGCC +
Preference number: 4 (lower is better)
Translates to: WSRGAKCWPMYRPEASHRRPHTV*SSRIAA
Trigger: GGCTGCAATCCTGGATGATCAGACAGTGTGTGGCCG...TCGGTGTGAAGCCTCTGGCCTGTACATCGGCCAACATTTGGCCCCACGGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp TGGAGAAAGACCGAGAAGAGAAGCAGTCTAAGGACTGAGCCCTGGAGCCCCACACAGCCTTGGCGCAGATaGGGCTGGCCGAGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: WRKTEKRSSLRTEPWSPTQPWRR*GWPRGS
Trigger: ACTACCCCTCGGCCAGCCTCATCTGCGCCAAGGCTG...TGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTTCTCTTCTCGGTCTTTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp TGGTCCCGTGGGGCCAAATGTTGGCCGATGTACAGGCCAGAGGCTTCACACCGAGCGTCTCCTTGGAGATaGGGAAGCCACGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: WSRGAKCWPMYRPEASHRASPWR*GSHAPV
Trigger: AACTGGTGCGTGGCTTCCTCATCTCCAAGGAGACGC...TCGGTGTGAAGCCTCTGGCCTGTACATCGGCCAACATTTGGCCCCACGGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp TGGTCCCGTGGGGCCAAATGTTGGCCGATGTACAGGCCAGAGGCTTCACACCGAAGGGGTGGGACGTGTTaGACATGGAGAAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: WSRGAKCWPMYRPEASHRRGGTC*TWRSPG
Trigger: TCCTGGGCTTCTCCATGTTCAACACGTCCCACCCCT...TCGGTGTGAAGCCTCTGGCCTGTACATCGGCCAACATTTGGCCCCACGGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp GGGGAGCCTGAGCAGTCCCAGAATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTGAAACAGGACGCAGCTaGCAGCCAGGTAGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: GEPEQSQNGVLSADCFPLETGRS*QPGRQE
Trigger: TTCTTGCCTACCTGGCTGTCAGCTGCGTCCTGTTTC...AAGCGGAAAGCAGTCAGCGGAGAGGACCCCATTCTGGGACTGCTCAGGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp AGCCTGAGCAGTCCCAGAATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAAAGTCTTGGGGAGCCTaGGCAGTCCCAGAATGGGGT +
Preference number: 4 (lower is better)
Translates to: SLSSPRMGSSPLTAFRFPKSWGA*AVPEWG
Trigger: ACCCCATTCTGGGACTGCTCAGGCTCCCCAAGACTT...TGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATTCTGGGACTGCTCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGAAAGCAGTCTAAGGACTaGGCCCTGGAGCCCCACAAC +
Preference number: 4 (lower is better)
Translates to: AWGERETQRGSLGRSDRRKQSKD*ALEPHN
Trigger: GTTGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTT...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp GACCACCAGGGTCTTGTTGGCCAGTGTCTGCGACAGGTTGATGTCCAGGGTGGTCACCGATCTCCTGGCTaGGGTTCAGCTCTCGGACAG +
Preference number: 4 (lower is better)
Translates to: DHQGLVGQCLRQVDVQGGHRSPG*GSALGQ
Trigger: CTGTCCGAGAGCTGAACCGCAGCCAGGAGATCGGTG...ACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR GCA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGTCCTTGGGCCAAGTaGAGAACACTGGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RAWGERETQRGSLGRSDRSPWAK*RTLAGS
Trigger: GCTGCCTGCCAGTGTTCTGCACTTGGCCCAAGGACT...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGCGTGGGGCCAAATGTTaGCCGATGTACAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: RAWGERETQRGSLGRSDRRGAKC*PMYRPE
Trigger: CTCTGGCCTGTACATCGGCCAACATTTGGCCCCACG...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp GGCCACAGCCAGGTCTGCCTTCCGGTTGATGAGCTCGCCAACCATGCCCGTCCATGCGCAGGGTGTAGTTaGTTCTCTGCCCTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GHSQVCLPVDELANHARPCAGCS*FSALCC
Trigger: ACAGCAAAGGGCAGAGAACCAACTACACCCTGCGCA...TGGACGGGCATGGTTGGCGAGCTCATCAACCGGAAGGCAGACCTGGCTGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp TGGTCCCGTGGGGCCAAATGTTGGCCGATGTACAGGCCAGAGGCTTCACACCGAACCCCAATCTCACGGTaGCCCTGCCGGGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: WSRGAKCWPMYRPEASHRTPISR*PCRDFS
Trigger: AGAAAAGTCCCGGCAGGGCCACCGTGAGATTGGGGT...TCGGTGTGAAGCCTCTGGCCTGTACATCGGCCAACATTTGGCCCCACGGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGACCACCAGGGTCTTGTTaGCCAGTGTCTGCGACAGGT +
Preference number: 4 (lower is better)
Translates to: AWGERETQRGSLGRSDRRPPGSC*PVSATG
Trigger: ACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGG...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp AGGCTTCACACCGATCTCCTGGCTGCGGTTCAGCTCTCGGACAGCGCTCACCACCCGGCGCATGACGTATaGGTTCTCCAGGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: RLHTDLLAAVQLSDSAHHPAHDV*VLQDGC
Trigger: ACAACCATCCTGGAGAACCCATACGTCATGCGCCGG...GTGGTGAGCGCTGTCCGAGAGCTGAACCGCAGCCAGGAGATCGGTGTGAAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp TTGTTGGCCAGTGTCTGCGACAGGTTGATGTCCAGGGTGGTGGCATTCATGGCCTGGTTCTCCAGGATGTaGGGGCGTGCCCGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LLASVCDRLMSRVVAFMAWFSRM*GRARRH
Trigger: ATGCCTGCGGGCACGCCCCCACATCCTGGAGAACCA...GGCCATGAATGCCACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGTGGAGCCGGCGTGGATaGTGCCATACTCGATGTTGG +
Preference number: 4 (lower is better)
Translates to: RAWGERETQRGSLGRSDRWSRRG*CHTRCW
Trigger: CCAACATCGAGTATGGCACCATCCACGCCGGCTCCA...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGAATGGTGGAGCCGGCGTaGATGGTGCCATACTCGATG +
Preference number: 4 (lower is better)
Translates to: AWGERETQRGSLGRSDRRMVEPA*MVPYSM
Trigger: CATCGAGTATGGCACCATCCACGCCGGCTCCACCAT...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGAGAGAAGGGAAGAAAGTaGGCGGTGGCTGGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: AWGERETQRGSLGRSDRREKGRK*AVAGRE
Trigger: TTCCCTCCCAGCCACCGCCCACTTTCTTCCCTTCTC...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGGATGCCAGACTGGAGTaGGGGGCAAGAGGAAATGGG +
Preference number: 4 (lower is better)
Translates to: RAWGERETQRGSLGRSDRDARLE*GARGNG
Trigger: CCCATTTCCTCTTGCCCCCCACTCCAGTCTGGCATC...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301218.8
3UTR CAA 72 bp ACCACCAGGGTCTTGTTGGCCAGTGTCTGCGACAGGTaGATGTCCAGGGTGGTGGCATTCATGGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TTRVLLASVCDR*MSRVVAFMARV
Trigger: CACCCTGGCCATGAATGCCACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp TGGAGAAAGACCGAGAAGAGAAGCAGTCTAAGGACTGAGCCCTGGAGCCCCACAGCGAAGCGAAGGTACTaGAGGCGGGGTGTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: WRKTEKRSSLRTEPWSPTAKRRY*RRGVSS
Trigger: CGAGGAGACACCCCGCCTTCAGTACCTTCGCTTCGC...TGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTTCTCTTCTCGGTCTTTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp GCTGACGTCCTCGTTACTGGGGTACAGGCTGACAGACGCGAAGCGAAGGTACTGCCCTCCAGGACATGTTaGGGCTGCGGACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: ADVLVTGVQADRREAKVLPSRTC*GCGQTQ
Trigger: CTGAGTTTGTCCGCAGCCTCAACATGTCCTGGAGGG...CAGTACCTTCGCTTCGCGTCTGTCAGCCTGTACCCCAGTAACGAGGACGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp GATGGTTGTGACCACCAGGGTCTTGTTGGCCAGTGTCTGCGACAGGTTGATGTCAAACATCAGGGCGGCTaGCAGCGCAGGGCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: DGCDHQGLVGQCLRQVDVKHQGG*QRRAQV
Trigger: TACCTGGGCCCTGCGCTGTCAGCCGCCCTGATGTTT...GACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTCACAACCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGAGAAACAGGACGCAGCTaGCAGCCAGGTAGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: AWGERETQRGSLGRSDRRETGRS*QPGRQE
Trigger: TTCTTGCCTACCTGGCTGTCAGCTGCGTCCTGTTTC...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp AAATGTTGGCCGATGTACAGGCCAGAGGCTTCACACCGATCTCCTGGCTGCGGTCAGGGTTCCCAGGATTaGCTGGCACCTGATGCAGGC +
Preference number: 4 (lower is better)
Translates to: KCWPMYRPEASHRSPGCGQGSQD*LAPDAG
Trigger: GCCTGCATCAGGTGCCAGTCAATCCTGGGAACCCTG...ACCGCAGCCAGGAGATCGGTGTGAAGCCTCTGGCCTGTACATCGGCCAACATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR GCA 90 bp TTGTTGGCCAGTGTCTGCGACAGGTTGATGTCCAGGGTGGTGGCATTCATGGCCGCGCTCACCACCACGTaGACGGCGTCAAACATCAGG +
Preference number: 4 (lower is better)
Translates to: LLASVCDRLMSRVVAFMAALTTT*TASNIR
Trigger: CCTGATGTTTGACGCCGTGCACGTGGTGGTGAGCGC...GGCCATGAATGCCACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR GCA 90 bp CAGGCTGACAGACGCGAAGCGAAGGTACTGAAGGCGGGGTGTCTCCTCGGGACCGGGACTTTTCTAGGATaGGCAGGGTGTAGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: QADRREAKVLKAGCLLGTGTFLG*AGCSWF
Trigger: GAACCAACTACACCCTGCGCATCCTAGAAAAGTCCC...GGTCCCGAGGAGACACCCCGCCTTCAGTACCTTCGCTTCGCGTCTGTCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR GCA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGAGATGTTGGTCTGATCTaGCAGGTCATCGGCCGACTC +
Preference number: 4 (lower is better)
Translates to: AWGERETQRGSLGRSDRRDVGLI*QVIGRL
Trigger: GAGTCGGCCGATGACCTGGCAGATCAGACCAACATC...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGCCGGCGTGGATGGTaGCATACTCGATGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: RAWGERETQRGSLGRSDRSRRGW*HTRCWS
Trigger: AGACCAACATCGAGTATGGCACCATCCACGCCGGCT...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp TGGAGAAAGACCGAGAAGAGAAGCAGTCTAAGGACTGAGCCCTGGAGCCCCACATGGCAGGCAGCTGGATaGAGAGCTGGGGTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: WRKTEKRSSLRTEPWSPTWQAAG*RAGVSS
Trigger: CGAGGAGACCCCAGCTCTGCATCCAGCTGCCTGCCA...TGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTTCTCTTCTCGGTCTTTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp CCAGGACATGTTGAGGCTGCGGACAAACTCAGGGTAGAAGGGGTGGGACGTGTTCCTGGCAGCTGGGGCTaGCGAAGGCAACAATCAGCA +
Preference number: 4 (lower is better)
Translates to: PGHVEAADKLRVEGVGRVPGSWG*RRQQSA
Trigger: TGCTGATTGTTGCCTTCGCCAGCCCCAGCTGCCAGG...AACACGTCCCACCCCTTCTACCCTGAGTTTGTCCGCAGCCTCAACATGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp CCAGGACATGTTGAGGCTGCGGACAAACTCAGGGTAGAAGGGGTGGGACGTGTTTCCGTGGTCTCGTACTaGCTGTCCCGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PGHVEAADKLRVEGVGRVSVVSY*LSRCSS
Trigger: TGAGCTGCAGCGGGACAGCCAGTACGAGACCACGGA...AACACGTCCCACCCCTTCTACCCTGAGTTTGTCCGCAGCCTCAACATGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp GACCACCAGGGTCTTGTTGGCCAGTGTCTGCGACAGGTTGATGTCCAGGGTGGTATGAGGCTGGTCCCGTaGGGCCAAATGTTGGCCGAT +
Preference number: 4 (lower is better)
Translates to: DHQGLVGQCLRQVDVQGGMRLVP*GQMLAD
Trigger: ATCGGCCAACATTTGGCCCCACGGGACCAGCCTCAT...ACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp CCAGGACATGTTGAGGCTGCGGACAAACTCAGGGTAGAAGGGGTGGGACGTGTTGCGTGCCCGCAGGCATaGGTGTGGGTTATACCACTC +
Preference number: 4 (lower is better)
Translates to: PGHVEAADKLRVEGVGRVACPQA*VWVIPL
Trigger: GAGTGGTATAACCCACACCCATGCCTGCGGGCACGC...AACACGTCCCACCCCTTCTACCCTGAGTTTGTCCGCAGCCTCAACATGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp CGGGCTCCAGAGCCAGGCCTCGGACTTCGCGGGGAACCAAAGGCAAAATCGCGGTGGTACCGTGAATTCTaGAAGAAGGTCATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RAPEPGLGLRGEPKAKSRWYREF*KKVMVE
Trigger: CTCCACCATGACCTTCTTCCAGAATTCACGGTACCA...CCGCGATTTTGCCTTTGGTTCCCCGCGAAGTCCGAGGCCTGGCTCTGGAGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp ATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCATGCGCTGGTACGTTTaGTACCGTGAATTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: MGSSPLTAFRFPEPPPKSMRWYV*YREFWK
Trigger: CTTCCAGAATTCACGGTACCAAACGTACCAGCGCAT...GGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CCA 90 bp GGCCAAATGTTGGCCGATGTACAGGCCAGAGGCTTCACACCGATCTCCTGGCTGTGGCAATGGTGTCCGTaGTCTCGTACTGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GQMLADVQARGFTPISWLWQWCP*SRTGCP
Trigger: GGGACAGCCAGTACGAGACCACGGACACCATTGCCA...CAGCCAGGAGATCGGTGTGAAGCCTCTGGCCTGTACATCGGCCAACATTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGGTCCAACATCCTCACTaGCAGCGTCTCCTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: RAWGERETQRGSLGRSDRVQHPH*QRLLGD
Trigger: ATCTCCAAGGAGACGCTGTCAGTGAGGATGTTGGAC...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp CAGGCTGACAGACGCGAAGCGAAGGTACTGAAGGCGGGGTGTCTCCTCGGGACCGTACTTGTAAAACGCTaGGGTCATTCCCAGTTCCGA +
Preference number: 4 (lower is better)
Translates to: QADRREAKVLKAGCLLGTVLVKR*GHSQFR
Trigger: TCGGAACTGGGAATGACCTCAGCGTTTTACAAGTAC...GGTCCCGAGGAGACACCCCGCCTTCAGTACCTTCGCTTCGCGTCTGTCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp CAGGCTGACAGACGCGAAGCGAAGGTACTGAAGGCGGGGTGTCTCCTCGGGACCGGAAGTCCATGGTGGTaGGGATGTACTTGTAAAACG +
Preference number: 4 (lower is better)
Translates to: QADRREAKVLKAGCLLGTGSPWW*GCTCKT
Trigger: CGTTTTACAAGTACATCCTCACCACCATGGACTTCC...GGTCCCGAGGAGACACCCCGCCTTCAGTACCTTCGCTTCGCGTCTGTCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp GGACATGTTGAGGCTGCGGACAAACTCAGGGTAGAAGGGGTGGGACGTGTTGAATCTGCCCTTTGCTGTTaGACTCGACCCGCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: GHVEAADKLRVEGVGRVESALCC*TRPARS
Trigger: TGACCGGGCGGGTCGAGTTCAACAGCAAAGGGCAGA...TTCAACACGTCCCACCCCTTCTACCCTGAGTTTGTCCGCAGCCTCAACATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp GGACATGTTGAGGCTGCGGACAAACTCAGGGTAGAAGGGGTGGGACGTGTTGAAAGTTGGGCCGGCGCATaGCGTATGGGTTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GHVEAADKLRVEGVGRVESWAGA*RMGSPG
Trigger: TCCTGGAGAACCCATACGTCATGCGCCGGCCCAACT...TTCAACACGTCCCACCCCTTCTACCCTGAGTTTGTCCGCAGCCTCAACATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp ATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCGTACGTTTGGTACCGTaGATTCTGGAAGAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: MGSSPLTAFRFPEPPPKSVRLVP*ILEEGH
Trigger: ATGACCTTCTTCCAGAATTCACGGTACCAAACGTAC...GGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR TCA 90 bp TGGAGAAAGACCGAGAAGAGAAGCAGTCTAAGGACTGAGCCCTGGAGCCCCACACCGGAGGGATGTCCTTaGGAAGGCAACCTGGACACG +
Preference number: 4 (lower is better)
Translates to: WRKTEKRSSLRTEPWSPTPEGCP*EGNLDT
Trigger: CGTGTCCAGGTTGCCTTCTCAAGGACATCCCTCCGG...TGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTTCTCTTCTCGGTCTTTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp GCTGACGTCCTCGTTACTGGGGTACAGGCTGACAGACGCGAAGCGAAGGTACTGCCAGGATTGCAGCCATaGGCAGTGATGAGAGCACCT +
Preference number: 4 (lower is better)
Translates to: ADVLVTGVQADRREAKVLPGLQP*AVMRAP
Trigger: AGGTGCTCTCATCACTGCGCATGGCTGCAATCCTGG...CAGTACCTTCGCTTCGCGTCTGTCAGCCTGTACCCCAGTAACGAGGACGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR GCA 90 bp TGGAGAAAGACCGAGAAGAGAAGCAGTCTAAGGACTGAGCCCTGGAGCCCCACAGCGCTCACCACCACGTaGACGGCGTCAAACATCAGG +
Preference number: 4 (lower is better)
Translates to: WRKTEKRSSLRTEPWSPTALTTT*TASNIR
Trigger: CCTGATGTTTGACGCCGTGCACGTGGTGGTGAGCGC...TGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTTCTCTTCTCGGTCTTTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp GATGGTTGTGACCACCAGGGTCTTGTTGGCCAGTGTCTGCGACAGGTTGATGTCAGTGATGAGAGCACCTaGCAGCTGGGGCTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: DGCDHQGLVGQCLRQVDVSDEST*QLGLAK
Trigger: CTTCGCCAGCCCCAGCTGCCAGGTGCTCTCATCACT...GACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTCACAACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp GATGGTTGTGACCACCAGGGTCTTGTTGGCCAGTGTCTGCGACAGGTTGATGTCGGCCCAGGTAGGTGCTaGCTTCACAGTTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: DGCDHQGLVGQCLRQVDVGPGRC*LHSSPS
Trigger: GGAGGGAGAACTGTGAAGCCAGCACCTACCTGGGCC...GACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTCACAACCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp CCAGGACATGTTGAGGCTGCGGACAAACTCAGGGTAGAAGGGGTGGGACGTGTTTTCACACCGATCTCCTaGCTGCGGTTCAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PGHVEAADKLRVEGVGRVFTPIS*LRFSSR
Trigger: CCGAGAGCTGAACCGCAGCCAGGAGATCGGTGTGAA...AACACGTCCCACCCCTTCTACCCTGAGTTTGTCCGCAGCCTCAACATGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp GGGGTAGTTGAAGGACTTGAGGATTCGGGAGACCGCCAAGCTGACGTCCTCGTTCGTGGGGCCAAATGTTaGCCGATGTACAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GVVEGLEDSGDRQADVLVRGAKC*PMYRPE
Trigger: CTCTGGCCTGTACATCGGCCAACATTTGGCCCCACG...AACGAGGACGTCAGCTTGGCGGTCTCCCGAATCCTCAAGTCCTTCAACTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp GGACATGTTGAGGCTGCGGACAAACTCAGGGTAGAAGGGGTGGGACGTGTTGAACATAGGGGCTCAGCCTaGCAGCCAGAAACAGGACGC +
Preference number: 4 (lower is better)
Translates to: GHVEAADKLRVEGVGRVEHRGSA*QPETGR
Trigger: GCGTCCTGTTTCTGGCTGCCAGGCTGAGCCCCTATG...TTCAACACGTCCCACCCCTTCTACCCTGAGTTTGTCCGCAGCCTCAACATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR CAA 72 bp GGGTTCTCCAGGATGGTTGTGACCACCAGGGTCTTGTaGGCCAGTGTCTGCGACAGGTTGATGTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GFSRMVVTTRVL*ASVCDRLMSRV
Trigger: CACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTCACAACCATCCTGGAGAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp GGACATGTTGAGGCTGCGGACAAACTCAGGGTAGAAGGGGTGGGACGTGTTGAATACTGGGGTACAGGCTaGCAGACGCGAAGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: GHVEAADKLRVEGVGRVEYWGTG*QTRSEG
Trigger: ACCTTCGCTTCGCGTCTGTCAGCCTGTACCCCAGTA...TTCAACACGTCCCACCCCTTCTACCCTGAGTTTGTCCGCAGCCTCAACATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp TTGTTGGCCAGTGTCTGCGACAGGTTGATGTCCAGGGTGGTGGCATTCATGGCCTCTCCAGGATGGTTGTaGCCACCAGGGTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LLASVCDRLMSRVVAFMASPGWL*PPGSCW
Trigger: CCAACAAGACCCTGGTGGTCACAACCATCCTGGAGA...GGCCATGAATGCCACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGACAGCGCCCGGGGCATaGTCTCCGAGCCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQTAPGA*SPSPAA
Trigger: TGCAGCAGGGCTCGGAGATCATGCCCCGGGCGCTGT...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCACCCACCAGACTCCGCTaGCACAGCGCGTGGACAGCG +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREAPTRLR*HSAWTA
Trigger: CGCTGTCCACGCGCTGTGTCAGCGGAGTCTGGTGGG...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGGGGACTTTTCTAGGATaGGCAGGGTGTAGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: RAWGERETQRGSLGRSDRGTFLG*AGCSWF
Trigger: GAACCAACTACACCCTGCGCATCCTAGAAAAGTCCC...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp CCAGGACATGTTGAGGCTGCGGACAAACTCAGGGTAGAAGGGGTGGGACGTGTTATCTCACGGTGGCCCTaGCGGGACTTTTCTAGGATG +
Preference number: 4 (lower is better)
Translates to: PGHVEAADKLRVEGVGRVISRWP*RDFSRM
Trigger: CATCCTAGAAAAGTCCCGGCAGGGCCACCGTGAGAT...AACACGTCCCACCCCTTCTACCCTGAGTTTGTCCGCAGCCTCAACATGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR GCA 90 bp GCTGACGTCCTCGTTACTGGGGTACAGGCTGACAGACGCGAAGCGAAGGTACTGTTGTTGGCCAGTGTCTaGGACAGGTTGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ADVLVTGVQADRREAKVLLLASV*DRLMSR
Trigger: CCTGGACATCAACCTGTCGCAGACACTGGCCAACAA...CAGTACCTTCGCTTCGCGTCTGTCAGCCTGTACCCCAGTAACGAGGACGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp TGGAGAAAGACCGAGAAGAGAAGCAGTCTAAGGACTGAGCCCTGGAGCCCCACATTGCCCAGCGTGTACTaGTTCTCCAGGATGTGGGGG +
Preference number: 4 (lower is better)
Translates to: WRKTEKRSSLRTEPWSPTLPSVY*FSRMWG
Trigger: CCCCCACATCCTGGAGAACCAGTACACGCTGGGCAA...TGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTTCTCTTCTCGGTCTTTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp GATGAGGAAGCCACGCACCAGTTCCTCCAATCGCAGCAGGCACTCAGCCTTGGCCAGTGCCTGTTCTCATaGCAGAACCCTAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: DEEATHQFLQSQQALSLGQCLFS*QNPNFS
Trigger: GGAGAAGTTAGGGTTCTGCCATGAGAACAGGCACTG...GCCAAGGCTGAGTGCCTGCTGCGATTGGAGGAACTGGTGCGTGGCTTCCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
3UTR CAA 72 bp CGGCTGTCGTCCAACATCCTCACTGACAGCGTCTCCTaGGAGATGAGGAAGCCACGCACCAGTTCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: RLSSNILTDSVS*EMRKPRTSSSN
Trigger: ATTGGAGGAACTGGTGCGTGGCTTCCTCATCTCCAAGGAGACGCTGTCAGTGAGGATGTTGGACGACAGCCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGAGTACTTGTAAAACGCTaGGGTCATTCCCAGTTCCGA +
Preference number: 4 (lower is better)
Translates to: AWGERETQRGSLGRSDRRVLVKR*GHSQFR
Trigger: TCGGAACTGGGAATGACCTCAGCGTTTTACAAGTAC...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp GGACATGTTGAGGCTGCGGACAAACTCAGGGTAGAAGGGGTGGGACGTGTTGAAGAAACAGGACGCAGCTaGCAGCCAGGTAGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: GHVEAADKLRVEGVGRVEETGRS*QPGRQE
Trigger: TTCTTGCCTACCTGGCTGTCAGCTGCGTCCTGTTTC...TTCAACACGTCCCACCCCTTCTACCCTGAGTTTGTCCGCAGCCTCAACATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR GCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCACACGGTGGAGGCAGATaGTGGGCTAGAGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREAHGGGR*WARGGP
Trigger: GGGCCCTCCTCTAGCCCAGCATCTGCCTCCACCGTG...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGCAGACACAACCCCTTTaGGTAAGATCTGACACATGG +
Preference number: 4 (lower is better)
Translates to: RAWGERETQRGSLGRSDRQTQPL*VRSDTW
Trigger: CCATGTGTCAGATCTTACCCAAAGGGGTTGTGTCTG...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp GGCCAAATGTTGGCCGATGTACAGGCCAGAGGCTTCACACCGATCTCCTGGCTGAGAAGCCCAGGATGTTaGAGGAGTCCTCCACAATAC +
Preference number: 4 (lower is better)
Translates to: GQMLADVQARGFTPISWLRSPGC*RSPPQY
Trigger: GTATTGTGGAGGACTCCTCCAACATCCTGGGCTTCT...CAGCCAGGAGATCGGTGTGAAGCCTCTGGCCTGTACATCGGCCAACATTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp TGGAGAAAGACCGAGAAGAGAAGCAGTCTAAGGACTGAGCCCTGGAGCCCCACACCGGCGCATGACGTATaGGTTCTCCAGGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: WRKTEKRSSLRTEPWSPTPAHDV*VLQDGC
Trigger: ACAACCATCCTGGAGAACCCATACGTCATGCGCCGG...TGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTTCTCTTCTCGGTCTTTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
3UTR CAA 72 bp TATGGGTTCTCCAGGATGGTTGTGACCACCAGGGTCTaGTTGGCCAGTGTCTGCGACAGGTTGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: YGFSRMVVTTRV*LASVCDRLMSR
Trigger: CCTGGACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTCACAACCATCCTGGAGAACCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGGGAGACCGCCAAGCTaGCGTCCTCGTTACTGGGGT +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREAGRPPS*RPRYWG
Trigger: ACCCCAGTAACGAGGACGTCAGCTTGGCGGTCTCCC...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAAAACATCAGGGCGGCTaGCAGCGCAGGGCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREAKHQGG*QRRAQV
Trigger: TACCTGGGCCCTGCGCTGTCAGCCGCCCTGATGTTT...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGAGTACGTTTGGTACCGTaGATTCTGGAAGAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: AWGERETQRGSLGRSDRRVRLVP*ILEEGH
Trigger: ATGACCTTCTTCCAGAATTCACGGTACCAAACGTAC...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGGCAGGATGGCCAGTGTaGTCTCATCCCGGAACGGGG +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQAGWPV*SHPGTG
Trigger: CCCCGTTCCGGGATGAGATCACACTGGCCATCCTGC...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp TGGAGAAAGACCGAGAAGAGAAGCAGTCTAAGGACTGAGCCCTGGAGCCCCACAGAAACCACAGGCTGTTaGCCAGCGTGTACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: WRKTEKRSSLRTEPWSPTETTGC*PACTGS
Trigger: AGAACCAGTACACGCTGGGCAACAGCCTGTGGTTTC...TGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTTCTCTTCTCGGTCTTTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp TGGAGAAAGACCGAGAAGAGAAGCAGTCTAAGGACTGAGCCCTGGAGCCCCACATGCGCAGGGTGTAGTTaGTTCTCTGCCCTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: WRKTEKRSSLRTEPWSPTCAGCS*FSALCC
Trigger: ACAGCAAAGGGCAGAGAACCAACTACACCCTGCGCA...TGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTTCTCTTCTCGGTCTTTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGACGGGAATTTCAGACATaGAAGTTGCTGGTGACAAGA +
Preference number: 4 (lower is better)
Translates to: AWGERETQRGSLGRSDRRREFQT*KLLVTR
Trigger: TCTTGTCACCAGCAACTTCCATGTCTGAAATTCCCG...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGAACAACAAACAGAGCCTaGGGAGAAAGAGAAACCCAA +
Preference number: 4 (lower is better)
Translates to: AWGERETQRGSLGRSDRRTTNRA*GERETQ
Trigger: TTGGGTTTCTCTTTCTCCCCAGGCTCTGTTTGTTGT...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp TGGTCCCGTGGGGCCAAATGTTGGCCGATGTACAGGCCAGAGGCTTCACACCGACTCAAGACTGGGAGGTaGAAAGCTGTTGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: WSRGAKCWPMYRPEASHRLKTGR*KAVVFA
Trigger: AGCAAAAACAACAGCTTTCCACCTCCCAGTCTTGAG...TCGGTGTGAAGCCTCTGGCCTGTACATCGGCCAACATTTGGCCCCACGGGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp GATGAGGAAGCCACGCACCAGTTCCTCCAATCGCAGCAGGCACTCAGCCTTGGCCAGACACAACCCCTTTaGGTAAGATCTGACACATTC +
Preference number: 4 (lower is better)
Translates to: DEEATHQFLQSQQALSLGQTQPL*VRSDTF
Trigger: GAATGTGTCAGATCTTACCCAAAGGGGTTGTGTCTG...GCCAAGGCTGAGTGCCTGCTGCGATTGGAGGAACTGGTGCGTGGCTTCCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR TCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTCTGCCCTTTGCTGTTaGACTCGACCCGCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQSALCC*TRPARS
Trigger: TGACCGGGCGGGTCGAGTTCAACAGCAAAGGGCAGA...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGGAGCCTGGGAAGGAGTaGCCGGAGAAGTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQEPGKE*PEKWEK
Trigger: CTTCTCCCACTTCTCCGGTCACTCCTTCCCAGGCTC...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGCAGGGCCCAGGTAGGTaGTGGCTTCACAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQQGPGR*WLHSSP
Trigger: GGGAGAACTGTGAAGCCAGCACCTACCTGGGCCCTG...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGCACCGATCTCCTGGCTaGGGTTCAGCTCTCGGACAG +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQHRSPG*GSALGQ
Trigger: CTGTCCGAGAGCTGAACCGCAGCCAGGAGATCGGTG...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCACCTGGCAGCTGGGGCTaGCGAAGGCAACAATCAGCA +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREAPGSWG*RRQQSA
Trigger: TGCTGATTGTTGCCTTCGCCAGCCCCAGCTGCCAGG...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAAGAGCACCTGGCAGCTaGGGCTGGCGAAGGCAACAA +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREARAPGS*GWRRQQ
Trigger: TTGTTGCCTTCGCCAGCCCCAGCTGCCAGGTGCTCT...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCATCCGTGGTCTCGTACTaGCTGTCCCGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREASVVSY*LSRCSS
Trigger: TGAGCTGCAGCGGGACAGCCAGTACGAGACCACGGA...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGCGTGCCCGCAGGCATaGGTGTGGGTTATACCACTC +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREAACPQA*VWVIPL
Trigger: GAGTGGTATAACCCACACCCATGCCTGCGGGCACGC...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCACCCAACGAGGGAGCCTaGGAAGGAGTGACCGGAGAA +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREAPNEGA*EGVTGE
Trigger: TTCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGG...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGCGGCCACACACTGTCTaGTCATCCAGGATTGCAGCC +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQRPHTV*SSRIAA
Trigger: GGCTGCAATCCTGGATGATCAGACAGTGTGTGGCCG...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp TTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTCTACTGGGGTACAGGCTaGCAGACGCGAAGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: FGWWDHSSSGERPRREAVYWGTG*QTRSEG
Trigger: ACCTTCGCTTCGCGTCTGTCAGCCTGTACCCCAGTA...GACTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGCGTCTCCTTGGAGATaGGGAAGCCACGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREAASPWR*GSHAPV
Trigger: AACTGGTGCGTGGCTTCCTCATCTCCAAGGAGACGC...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp TGGAGAAAGACCGAGAAGAGAAGCAGTCTAAGGACTGAGCCCTGGAGCCCCACAGGAAGTCCATGGTGGTaGGGATGTACTTGTAAAACG +
Preference number: 4 (lower is better)
Translates to: WRKTEKRSSLRTEPWSPTGSPWW*GCTCKT
Trigger: CGTTTTACAAGTACATCCTCACCACCATGGACTTCC...TGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTTCTCTTCTCGGTCTTTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGAGGGGTGGGACGTGTTaGACATGGAGAAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQRGGTC*TWRSPG
Trigger: TCCTGGGCTTCTCCATGTTCAACACGTCCCACCCCT...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCACCCTCCAGGACATGTTaGGGCTGCGGACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREAPSRTC*GCGQTQ
Trigger: CTGAGTTTGTCCGCAGCCTCAACATGTCCTGGAGGG...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGGTGTCTGCGACAGGTTaGTGTCCAGGGTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQVSATG*CPGWWH
Trigger: ATGCCACCACCCTGGACATCAACCTGTCGCAGACAC...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGCTCCTCGGACTCAGCTaGCCTCCGTGTGGACCATAT +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQLLGLS*PPCGPY
Trigger: ATATGGTCCACACGGAGGTCAGCTGAGTCCGAGGAG...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAATGATCCCGTTGATCTaGTCCCGGGCCAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREAMIPLI*SRAKAK
Trigger: CTTGGCCTTGGCCCGGGAGCAGATCAACGGGATCAT...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAAGAAGTAGCCAGGCTTaGGGCCCATGTGCACTCGGT +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREARSSQA*GPCALG
Trigger: ACCGAGTGCACATGGGCCGCAAGCCTGGCTACTTCT...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp GCTGACGTCCTCGTTACTGGGGTACAGGCTGACAGACGCGAAGCGAAGGTACTGGAAAGCTGTTGTTTTTaGTTGTCCAGTGCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: ADVLVTGVQADRREAKVLESCCF*LSSACS
Trigger: AGAACAGGCACTGGACAAGCAAAAACAACAGCTTTC...CAGTACCTTCGCTTCGCGTCTGTCAGCCTGTACCCCAGTAACGAGGACGTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGACACATGGTGTCCGTaGTCTCGTACTGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREADTWCP*SRTGCP
Trigger: GGGACAGCCAGTACGAGACCACGGACACCATGTGTC...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTTCACACCGATCTCCTaGCTGCGGTTCAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQFTPIS*LRFSSR
Trigger: CCGAGAGCTGAACCGCAGCCAGGAGATCGGTGTGAA...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAATGAGGCTGGTCCCGTaGGGCCAAATGTTGGCCGAT +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREAMRLVP*GQMLAD
Trigger: ATCGGCCAACATTTGGCCCCACGGGACCAGCCTCAT...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGACCCCAATCTCACGGTaGCCCTGCCGGGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQTPISR*PCRDFS
Trigger: AGAAAAGTCCCGGCAGGGCCACCGTGAGATTGGGGT...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp TTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTCGAAGAAAGTGGGCGGTaGCTGGGAGGGAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: FGWWDHSSSGERPRREAVEESGR*LGGKVR
Trigger: CCTCACTTTCCCTCCCAGCCACCGCCCACTTTCTTC...GACTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp TTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTCTCTCCAGGATGGTTGTaGCCACCAGGGTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: FGWWDHSSSGERPRREAVSPGWL*PPGSCW
Trigger: CCAACAAGACCCTGGTGGTCACAACCATCCTGGAGA...GACTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGGGGAAGAAGGGGCTTTaGGGATTGAGAGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQGKKGL*GLRVTG
Trigger: GCCAGTCACTCTCAATCCTCAAAGCCCCTTCTTCCC...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCACCAGGATTGCAGCCATaGGCAGTGATGAGAGCACCT +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREAPGLQP*AVMRAP
Trigger: AGGTGCTCTCATCACTGCGCATGGCTGCAATCCTGG...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp TTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTCATCTCACGGTGGCCCTaGCGGGACTTTTCTAGGATG +
Preference number: 4 (lower is better)
Translates to: FGWWDHSSSGERPRREAVISRWP*RDFSRM
Trigger: CATCCTAGAAAAGTCCCGGCAGGGCCACCGTGAGAT...GACTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGGACCCACCTTGATGTaGGGGATCTCCTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREAGPTLM*GISFSP
Trigger: TGGAGAGAAGGAGATCCCCCACATCAAGGTGGGTCC...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp TTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTCCAGTTGAGGCGCCGGTaGTATTCGTTCATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: FGWWDHSSSGERPRREAVQLRRR*YSFMVD
Trigger: GTCCACCATGAACGAATACCACCGGCGCCTCAACTG...GACTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCACCAAGTGCAGAACACTaGCAGGCAGCTGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREAPSAEH*QAAGCR
Trigger: TCTGCATCCAGCTGCCTGCCAGTGTTCTGCACTTGG...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGCCTTTGGGTAAGATCTaGCACATGGTGTCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQPLGKI*HMVSVV
Trigger: GACCACGGACACCATGTGTCAGATCTTACCCAAAGG...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTTGTTGGCCAGTGTCTaGGACAGGTTGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQLLASV*DRLMSR
Trigger: CCTGGACATCAACCTGTCGCAGACACTGGCCAACAA...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp TTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTCTACTGGCTGTCCCGCTaGAGCTCAAAGATGTCTACT +
Preference number: 4 (lower is better)
Translates to: FGWWDHSSSGERPRREAVYWLSR*SSKMST
Trigger: AGTAGACATCTTTGAGCTGCAGCGGGACAGCCAGTA...GACTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAACAATACCGTCCAGATaGAGGATGGGGAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREATIPSR*RMGKSM
Trigger: CATGGACTTCCCCATCCTGCATCTGGACGGTATTGT...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR GCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGCATGTAGTTCCACATaGGCTGGTACGTTTGGTACC +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREAACSST*AGTFGT
Trigger: GGTACCAAACGTACCAGCGCATGTGGAACTACATGC...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAAGAAGCCCAGGATGTTaGAGGAGTCCTCCACAATAC +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREARSPGC*RSPPQY
Trigger: GTATTGTGGAGGACTCCTCCAACATCCTGGGCTTCT...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGGTAAGATCTGACACATaGTGTCCGTGGTCTCGTACT +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQVRSDT*CPWSRT
Trigger: AGTACGAGACCACGGACACCATGTGTCAGATCTTAC...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCATGGTACCGTGAATTCTaGAAGAAGGTCATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREAWYREF*KKVMVE
Trigger: CTCCACCATGACCTTCTTCCAGAATTCACGGTACCA...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGATGCGCTGGTACGTTTaGTACCGTGAATTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQMRWYV*YREFWK
Trigger: CTTCCAGAATTCACGGTACCAAACGTACCAGCGCAT...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CCA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGGTCTTAAGAGCCATTTaGCTGGTGGGATCATTCAAG +
Preference number: 4 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQVLRAI*LVGSFK
Trigger: CTTGAATGATCCCACCAGCCAAATGGCTCTTAAGAC...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR TCA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCATTAAGACTGGAGAAATaGCAGCATATTTGTACGTTG +
Preference number: 4 (lower is better)
Translates to: PFGWWDHSSSGERPRREALRLEK*QHICTL
Trigger: CAACGTACAAATATGCTGTCATTTCTCCAGTCTTAA...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS GCA 90 bp GGCTCGGGCCGCCCGGGCGTCGGCGCCGGCGGGAACGCGACGTCTTaGGGCAAGAAACGGCGTGGCGCAGCTCCTGCAGCATCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: GSGRPGVGAGGNATS*GKKRRGAAPAASPG
Trigger: GCCAGGAGATGCTGCAGGAGCTGCGCCACGCCGTTTCTTGCCGCAAGACGTCGCGTTCCCGCCGGCGCCGACGCCCGGGCGGCCCGAGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262895.7
ENST00000454993.6
ENST00000593562.5
CDS CCA 90 bp CTGCCGCGGCCCCCACTCGCCACGGATCCTGGTGGGACGGAGGGCTaGGCTCCCTCGAGGCCCGAAGACCGACAGCGGGAGGTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: LPRPPLATDPGGTEG*APSRPEDRQREVLW
Trigger: CCAGAGCACCTCCCGCTGTCGGTCTTCGGGCCTCGAGGGAGCCCAGCCCTCCGTCCCACCAGGATCCGTGGCGAGTGGGGGCCGCGGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593562.5
CDS-3UTR CAA 90 bp GGCAAAATCGCGGCGTCCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTCCGTGGGGCCAAATGTaGGCCGATGTACAGGCCAGA +
Preference number: 5 (lower is better)
Translates to: GKIAASGAPAHKSCPAPAPWGQM*ADVQAR
Trigger: TCTGGCCTGTACATCGGCCAACATTTGGCCCCACGG...AGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCCGGACGCCGCGATTTTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp CCTGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCCCGATCTGGGTGAGGTaGCAGTTGAGGCGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: PGVLGSCALLARGTLSRVPIWVR*QLRRRW
Trigger: CCACCGGCGCCTCAACTGCAACCTCACCCAGATCGG...GACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp CCGGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGCGGGAGCGGAGACTGTCTGATCATCCAGGATaGCAGCCATGCGCAGTGATG +
Preference number: 5 (lower is better)
Translates to: PGRRRTSPVPRPLRERRLSDHPG*QPCAVM
Trigger: CATCACTGCGCATGGCTGCAATCCTGGATGATCAGA...CAGTCTCCGCTCCCGCAGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp CGCCAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATGACAGGGCCTGGAAGTaGGGCCGGCGCATGACGTAT +
Preference number: 5 (lower is better)
Translates to: RQPCPSRSRWARAPRTAHDRAWK*GRRMTY
Trigger: ATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTC...ATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp GGGGAGCCTGAGCAGTCCCAGAATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCGTCCAGGAGCCGTaGGGCTCGGGCGCCCCGTAC +
Preference number: 5 (lower is better)
Translates to: GEPEQSQNGVLSADCFPLPVQEP*GSGAPY
Trigger: GTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGG...AAGCGGAAAGCAGTCAGCGGAGAGGACCCCATTCTGGGACTGCTCAGGCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp CTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCCCAGCCCCCGGGAACGCGACGTCTaGCGGCAAGAAACGGCGTGG +
Preference number: 5 (lower is better)
Translates to: LSADCFPLPRAAPEVPSPRERDV*RQETAW
Trigger: CCACGCCGTTTCTTGCCGCAAGACGTCGCGTTCCCG...GGGGCTGGGGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp CCTGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCACTTCCACTCGGGCCTaGGCTGGGACCTCGATGATC +
Preference number: 5 (lower is better)
Translates to: PGVLGSCALLARGTLSRVTSTRA*AGTSMI
Trigger: GATCATCGAGGTCCCAGCCAAGGCCCGAGTGGAAGT...GACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp TGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCCACTCTGCCCTTTGCTGTaGAACTCGACCCGCCCGGTC +
Preference number: 5 (lower is better)
Translates to: WSPRFLRPSRPRHPLASPLCPLL*NSTRPV
Trigger: GACCGGGCGGGTCGAGTTCAACAGCAAAGGGCAGAG...TGGACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp GCTCGGGCGCCCCGTACAGCCCATCCTCCACCAACCGCAGGCGGTAGCGGAAGCGTGACCACCAGGGTCTaGTTGGCCAGTGTCTGCGAC +
Preference number: 5 (lower is better)
Translates to: ARAPRTAHPPPTAGGSGSVTTRV*LASVCD
Trigger: GTCGCAGACACTGGCCAACAAGACCCTGGTGGTCAC...GCTTCCGCTACCGCCTGCGGTTGGTGGAGGATGGGCTGTACGGGGCGCCCGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp TGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCCAGACAGGGCCTGGAAGTaGGGCCGGCGCATGACGTAT +
Preference number: 5 (lower is better)
Translates to: WSPRFLRPSRPRHPLASPDRAWK*GRRMTY
Trigger: ATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTC...TGGACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp GATGAGGAAGCCACGCACCAGTTCCTCCAATCGCAGCAGGCACTCAGCCTTGGCCCCGTCCAGGAGCCGTaGGGCTCGGGCGCCCCGTAC +
Preference number: 5 (lower is better)
Translates to: DEEATHQFLQSQQALSLGPVQEP*GSGAPY
Trigger: GTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGG...GCCAAGGCTGAGTGCCTGCTGCGATTGGAGGAACTGGTGCGTGGCTTCCTCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS GCA 90 bp ACTTCCACTCGGGCCTTGGCTGGGACCTCGATGATCCCGTTGATCTaGTCCCGGGCCAAGGCCAAGGCCAGACGCTCACCGCGGCCACAC +
Preference number: 5 (lower is better)
Translates to: TSTRALAGTSMIPLI*SRAKAKARRSPRPH
Trigger: GTGTGGCCGCGGTGAGCGTCTGGCCTTGGCCTTGGCCCGGGAGCAGATCAACGGGATCATCGAGGTCCCAGCCAAGGCCCGAGTGGAAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262895.7
ENST00000301218.8
ENST00000593562.5
ENST00000594528.1
CDS-3UTR CAA 90 bp CTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCCCAGCCCCACCTCGATGATCCCGTaGATCTGCTCCCGGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LSADCFPLPRAAPEVPSPTSMIP*ICSRAK
Trigger: CTTGGCCCGGGAGCAGATCAACGGGATCATCGAGGT...GGGGCTGGGGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp CGCCAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATACTGACAGCGTCTCCTaGGAGATGAGGAAGCCACGC +
Preference number: 5 (lower is better)
Translates to: RQPCPSRSRWARAPRTAHTDSVS*EMRKPR
Trigger: GCGTGGCTTCCTCATCTCCAAGGAGACGCTGTCAGT...ATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp GGGGCGCCGGCGCACAAGTCCTGTCCCGCGCCCGCTGCGGGAGCGGAGACTGCTATGATGGTGGACACCTaGTCATCACGGATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GAPAHKSCPAPAAGAETAMMVDT*SSRISL
Trigger: CAAGGAGATCCGTGATGACAAGGTGTCCACCATCAT...AGCAGTCTCCGCTCCCGCAGCGGGCGCGGGACAGGACTTGTGCGCCGGCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp TCCCCAGCCCCTGGAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCCCTCCAGGACATGTaGAGGCTGCGGACAAACTCA +
Preference number: 5 (lower is better)
Translates to: SPAPGVLGSCALLARGTLSLQDM*RLRTNS
Trigger: TGAGTTTGTCCGCAGCCTCAACATGTCCTGGAGGGA...GAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTCCAGGGGCTGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp CTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCCCAGCCCCACCACCAGGGTCTTGTaGGCCAGTGTCTGCGACAGG +
Preference number: 5 (lower is better)
Translates to: LSADCFPLPRAAPEVPSPTTRVL*ASVCDR
Trigger: CCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGT...GGGGCTGGGGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp GAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCCACTTGGGTGAGGTTGCAGTaGAGGCGCCGGTGGTATTCG +
Preference number: 5 (lower is better)
Translates to: ESSVPAPFSPAAPSRESTWVRLQ*RRRWYS
Trigger: CGAATACCACCGGCGCCTCAACTGCAACCTCACCCA...AGTGGACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS GCA 90 bp CGGGAACGCGACGTCTTGCGGCAAGAAACGGCGTGGCGCAGCTCCTaGAGCATCTCCTGGCACACCGACACCTCCTCGGACTCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: RERDVLRQETAWRSS*SISWHTDTSSDSAD
Trigger: GTCAGCTGAGTCCGAGGAGGTGTCGGTGTGCCAGGAGATGCTGCAGGAGCTGCGCCACGCCGTTTCTTGCCGCAAGACGTCGCGTTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262895.7
ENST00000454993.6
ENST00000593562.5
CDS-3UTR CAA 90 bp GAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCCACTACTGACAGCGTCTCCTaGGAGATGAGGAAGCCACGC +
Preference number: 5 (lower is better)
Translates to: ESSVPAPFSPAAPSRESTTDSVS*EMRKPR
Trigger: GCGTGGCTTCCTCATCTCCAAGGAGACGCTGTCAGT...AGTGGACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp CTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCCCAGCCCCAAGGGGTGGGACGTGTaGAACATGGAGAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LSADCFPLPRAAPEVPSPKGWDV*NMEKPR
Trigger: CCTGGGCTTCTCCATGTTCAACACGTCCCACCCCTT...GGGGCTGGGGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp GAGTCCTCGGTTCCTGCGCCCTTCTCGCCCGCGGCACCCTCTCGCGAGTCCACTAGGTCTGCCTTCCGGTaGATGAGCTCGCCAACCATG +
Preference number: 5 (lower is better)
Translates to: ESSVPAPFSPAAPSRESTRSAFR*MSSPTM
Trigger: CATGGTTGGCGAGCTCATCAACCGGAAGGCAGACCT...AGTGGACTCGCGAGAGGGTGCCGCGGGCGAGAAGGGCGCAGGAACCGAGGACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp CAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATCCTGGAAACCACAGGCTGTaGCCCAGCGTGTACTGGTTC +
Preference number: 5 (lower is better)
Translates to: QPCPSRSRWARAPRTAHPGNHRL*PSVYWF
Trigger: GAACCAGTACACGCTGGGCAACAGCCTGTGGTTTCC...AGGATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp AATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCGGGCTGCGTCAAGTCTaGGGGAGCCTGAGCAGTCCC +
Preference number: 5 (lower is better)
Translates to: NGVLSADCFPLPRAAPEVGLRQV*GSLSSP
Trigger: GGGACTGCTCAGGCTCCCCAAGACTTGACGCAGCCC...GACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp CAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATCCTCACCTGATGCAGGCCTaGGGGAGTCACAGAACTCCA +
Preference number: 5 (lower is better)
Translates to: QPCPSRSRWARAPRTAHPHLMQA*GSHRTP
Trigger: TGGAGTTCTGTGACTCCCCAAGGCCTGCATCAGGTG...AGGATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp CGGGCTCCAGAGCCAGGCCTCGGACTTCGCGGGGAACCAAAGGCAAAATCGCGGTCCTCGGGACCCACCTaGATGTGGGGGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RAPEPGLGLRGEPKAKSRSSGPT*MWGISF
Trigger: GAAGGAGATCCCCCACATCAAGGTGGGTCCCGAGGA...CCGCGATTTTGCCTTTGGTTCCCCGCGAAGTCCGAGGCCTGGCTCTGGAGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp GGCCACAGCCAGGTCTGCCTTCCGGTTGATGAGCTCGCCAACCATGCCCGTCCACTCTGCCCTTTGCTGTaGAACTCGACCCGCCCGGTC +
Preference number: 5 (lower is better)
Translates to: GHSQVCLPVDELANHARPLCPLL*NSTRPV
Trigger: GACCGGGCGGGTCGAGTTCAACAGCAAAGGGCAGAG...TGGACGGGCATGGTTGGCGAGCTCATCAACCGGAAGGCAGACCTGGCTGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS TCA 90 bp CGAAGCGTTCGTTCCCCGACAGGGCCTGGAAGTTGGGCCGGCGCATaGCGTATGGGTTCTCCTGGGTGGGCAGAAGAAAGCAGGGGTCAG +
Preference number: 5 (lower is better)
Translates to: RSVRSPTGPGSWAGA*RMGSPGWAEESRGQ
Trigger: CTGACCCCTGCTTTCTTCTGCCCACCCAGGAGAACCCATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTCGGGGAACGAACGCTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454993.6
CDS-3UTR CAA 90 bp CAACCATGCCCGTCCAGGAGCCGTTGGGCTCGGGCGCCCCGTACAGCCCATCCTTCTGATCATCCAGGATaGCAGCCATGCGCAGTGATG +
Preference number: 5 (lower is better)
Translates to: QPCPSRSRWARAPRTAHPSDHPG*QPCAVM
Trigger: CATCACTGCGCATGGCTGCAATCCTGGATGATCAGA...AGGATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp AGCCTGAGCAGTCCCAGAATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAAGCAGGCACTCAGCCTaGGCGCAGATGAGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: SLSSPRMGSSPLTAFRFPSRHSA*AQMRLA
Trigger: GGCCAGCCTCATCTGCGCCAAGGCTGAGTGCCTGCT...TGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATTCTGGGACTGCTCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp GGCACCAGGGGACACCCATCTGTCCAGAGGCCCTCCCCACCTCCAGAAGCGTGGTTGGTTCTCTGCCCTTaGCTGTTGAACTCGACCCGC +
Preference number: 5 (lower is better)
Translates to: GTRGHPSVQRPSPPPEAWLVLCP*LLNSTR
Trigger: GCGGGTCGAGTTCAACAGCAAAGGGCAGAGAACCAA...CCACGCTTCTGGAGGTGGGGAGGGCCTCTGGACAGATGGGTGTCCCCTGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp ATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCCAGTGTCTGCGACAGGTaGATGTCCAGGGTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: MGSSPLTAFRFPEPPPKSSVCDR*MSRVVA
Trigger: TGCCACCACCCTGGACATCAACCTGTCGCAGACACT...GGACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp AATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGAGCCGCCCCCGAAGTCGTGACCACCAGGGTCTaGTTGGCCAGTGTCTGCGAC +
Preference number: 5 (lower is better)
Translates to: NGVLSADCFPLPRAAPEVVTTRV*LASVCD
Trigger: GTCGCAGACACTGGCCAACAAGACCCTGGTGGTCAC...GACTTCGGGGGCGGCTCTGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGCCGATCTGGGTGAGGTaGCAGTTGAGGCGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: RAWGERETQRGSLGRSDRPIWVR*QLRRRW
Trigger: CCACCGGCGCCTCAACTGCAACCTCACCCAGATCGG...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp ACAGGCCAGAGGCTTCACACCGATCTCCTGGCTGCGGTTCAGCTCTCGGACAGCTCCTCGGGACCCACCTaGATGTGGGGGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TGQRLHTDLLAAVQLSDSSSGPT*MWGISF
Trigger: GAAGGAGATCCCCCACATCAAGGTGGGTCCCGAGGA...GCTGTCCGAGAGCTGAACCGCAGCCAGGAGATCGGTGTGAAGCCTCTGGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp GGCCAAATGTTGGCCGATGTACAGGCCAGAGGCTTCACACCGATCTCCTGGCTGAGCAGGCACTCAGCCTaGGCGCAGATGAGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GQMLADVQARGFTPISWLSRHSA*AQMRLA
Trigger: GGCCAGCCTCATCTGCGCCAAGGCTGAGTGCCTGCT...CAGCCAGGAGATCGGTGTGAAGCCTCTGGCCTGTACATCGGCCAACATTTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp ACAGGCCAGAGGCTTCACACCGATCTCCTGGCTGCGGTTCAGCTCTCGGACAGCCCGTGGGGCCAAATGTaGGCCGATGTACAGGCCAGA +
Preference number: 5 (lower is better)
Translates to: TGQRLHTDLLAAVQLSDSPWGQM*ADVQAR
Trigger: TCTGGCCTGTACATCGGCCAACATTTGGCCCCACGG...GCTGTCCGAGAGCTGAACCGCAGCCAGGAGATCGGTGTGAAGCCTCTGGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGCTCTGCCCTTTGCTGTaGAACTCGACCCGCCCGGTC +
Preference number: 5 (lower is better)
Translates to: RAWGERETQRGSLGRSDRLCPLL*NSTRPV
Trigger: GACCGGGCGGGTCGAGTTCAACAGCAAAGGGCAGAG...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp CAGGCTGACAGACGCGAAGCGAAGGTACTGAAGGCGGGGTGTCTCCTCGGGACCAGGTCTGCCTTCCGGTaGATGAGCTCGCCAACCATG +
Preference number: 5 (lower is better)
Translates to: QADRREAKVLKAGCLLGTRSAFR*MSSPTM
Trigger: CATGGTTGGCGAGCTCATCAACCGGAAGGCAGACCT...GGTCCCGAGGAGACACCCCGCCTTCAGTACCTTCGCTTCGCGTCTGTCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS CCA 90 bp GTCCCGCTGCAGCTCAAAGATGTCTACTTCCACTCGGGCCTTGGCTaGGACCTCGATGATCCCGTTGATCTGCTCCCGGGCCAAGGCCAA +
Preference number: 5 (lower is better)
Translates to: VPLQLKDVYFHSGLG*DLDDPVDLLPGQGQ
Trigger: TTGGCCTTGGCCCGGGAGCAGATCAACGGGATCATCGAGGTCCCAGCCAAGGCCCGAGTGGAAGTAGACATCTTTGAGCTGCAGCGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262895.7
ENST00000301218.8
ENST00000593562.5
ENST00000594528.1
CDS-3UTR CAA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGAACTTCCACTCGGGCCTaGGCTGGGACCTCGATGATC +
Preference number: 5 (lower is better)
Translates to: AWGERETQRGSLGRSDRRTSTRA*AGTSMI
Trigger: GATCATCGAGGTCCCAGCCAAGGCCCGAGTGGAAGT...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp GAGCCTGAGCAGTCCCAGAATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCTCATCACGGATCTCCTaGAGCAGTGGTGTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: EPEQSQNGVLSADCFPLPSSRIS*SSGVGS
Trigger: GGACCCCACACCACTGCTCAAGGAGATCCGTGATGA...GGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATTCTGGGACTGCTCAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp CCCGACAGGGCCTGGAAGTTGGGCCGGCGCATGACGTATGGGTTCTCCAGGATGTCCCTCCAGGACATGTaGAGGCTGCGGACAAACTCA +
Preference number: 5 (lower is better)
Translates to: PDRAWKLGRRMTYGFSRMSLQDM*RLRTNS
Trigger: TGAGTTTGTCCGCAGCCTCAACATGTCCTGGAGGGA...CATCCTGGAGAACCCATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGGCCGGAGGGATGTCCTaGAGAAGGCAACCTGGACAC +
Preference number: 5 (lower is better)
Translates to: RAWGERETQRGSLGRSDRAGGMS*RRQPGH
Trigger: GTGTCCAGGTTGCCTTCTCAAGGACATCCCTCCGGC...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS TCA 90 bp CTGGCAGGCAGCTGGATGCAGAGCTGGGGTCTCCTCGGACTCAGCTaGCCTCCGTGTGGACCATATGAATTCCATGACCGCCACGAAGAC +
Preference number: 5 (lower is better)
Translates to: LAGSWMQSWGLLGLS*PPCGPYEFHDRHED
Trigger: GTCTTCGTGGCGGTCATGGAATTCATATGGTCCACACGGAGGTCAGCTGAGTCCGAGGAGACCCCAGCTCTGCATCCAGCTGCCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGAACTGACAGCGTCTCCTaGGAGATGAGGAAGCCACGC +
Preference number: 5 (lower is better)
Translates to: AWGERETQRGSLGRSDRRTDSVS*EMRKPR
Trigger: GCGTGGCTTCCTCATCTCCAAGGAGACGCTGTCAGT...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGATCATCACGGATCTCCTaGAGCAGTGGTGTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: AWGERETQRGSLGRSDRRSSRIS*SSGVGS
Trigger: GGACCCCACACCACTGCTCAAGGAGATCCGTGATGA...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp TGGTCCCGTGGGGCCAAATGTTGGCCGATGTACAGGCCAGAGGCTTCACACCGAAGTGTCTGCGACAGGTaGATGTCCAGGGTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: WSRGAKCWPMYRPEASHRSVCDR*MSRVVA
Trigger: TGCCACCACCCTGGACATCAACCTGTCGCAGACACT...TCGGTGTGAAGCCTCTGGCCTGTACATCGGCCAACATTTGGCCCCACGGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGCCCGTCCAGGAGCCGTaGGGCTCGGGCGCCCCGTAC +
Preference number: 5 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQPVQEP*GSGAPY
Trigger: GTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGG...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp AGCCTGAGCAGTCCCAGAATGGGGTCCTCTCCGCTGACTGCTTTCCGCTTCCCAGGAAACCACAGGCTGTaGCCCAGCGTGTACTGGTTC +
Preference number: 5 (lower is better)
Translates to: SLSSPRMGSSPLTAFRFPGNHRL*PSVYWF
Trigger: GAACCAGTACACGCTGGGCAACAGCCTGTGGTTTCC...TGGGAAGCGGAAAGCAGTCAGCGGAGAGGACCCCATTCTGGGACTGCTCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262895.7
CDS-3UTR CAA 90 bp GGGGTAGTTGAAGGACTTGAGGATTCGGGAGACCGCCAAGCTGACGTCCTCGTTACTTCCACTCGGGCCTaGGCTGGGACCTCGATGATC +
Preference number: 5 (lower is better)
Translates to: GVVEGLEDSGDRQADVLVTSTRA*AGTSMI
Trigger: GATCATCGAGGTCCCAGCCAAGGCCCGAGTGGAAGT...AACGAGGACGTCAGCTTGGCGGTCTCCCGAATCCTCAAGTCCTTCAACTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp GCTGACGTCCTCGTTACTGGGGTACAGGCTGACAGACGCGAAGCGAAGGTACTGTCATCACGGATCTCCTaGAGCAGTGGTGTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: ADVLVTGVQADRREAKVLSSRIS*SSGVGS
Trigger: GGACCCCACACCACTGCTCAAGGAGATCCGTGATGA...CAGTACCTTCGCTTCGCGTCTGTCAGCCTGTACCCCAGTAACGAGGACGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp GGCCACAGCCAGGTCTGCCTTCCGGTTGATGAGCTCGCCAACCATGCCCGTCCAATGATGGTGGACACCTaGTCATCACGGATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GHSQVCLPVDELANHARPMMVDT*SSRISL
Trigger: CAAGGAGATCCGTGATGACAAGGTGTCCACCATCAT...TGGACGGGCATGGTTGGCGAGCTCATCAACCGGAAGGCAGACCTGGCTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGACCTTCAGAGGAGTCCTaGGGCCAAGTGCAGAACACT +
Preference number: 5 (lower is better)
Translates to: AWGERETQRGSLGRSDRRPSEES*GQVQNT
Trigger: AGTGTTCTGCACTTGGCCCAAGGACTCCTCTGAAGG...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGTCTGATCATCCAGGATaGCAGCCATGCGCAGTGATG +
Preference number: 5 (lower is better)
Translates to: RAWGERETQRGSLGRSDRSDHPG*QPCAVM
Trigger: CATCACTGCGCATGGCTGCAATCCTGGATGATCAGA...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp CCAGGACATGTTGAGGCTGCGGACAAACTCAGGGTAGAAGGGGTGGGACGTGTTAAGGGGTGGGACGTGTaGAACATGGAGAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PGHVEAADKLRVEGVGRVKGWDV*NMEKPR
Trigger: CCTGGGCTTCTCCATGTTCAACACGTCCCACCCCTT...AACACGTCCCACCCCTTCTACCCTGAGTTTGTCCGCAGCCTCAACATGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp TGGAGAAAGACCGAGAAGAGAAGCAGTCTAAGGACTGAGCCCTGGAGCCCCACAACCACCAGGGTCTTGTaGGCCAGTGTCTGCGACAGG +
Preference number: 5 (lower is better)
Translates to: WRKTEKRSSLRTEPWSPTTTRVL*ASVCDR
Trigger: CCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGT...TGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTTCTCTTCTCGGTCTTTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS TCA 90 bp TCCTGGGGGAACTATCCTCACCCTTCAGTCCAGGGTTCCCAGGATTaGCTGGCACCTGATGCAGGCCTTGGGGAGTCACAGAACTCCATT +
Preference number: 5 (lower is better)
Translates to: SWGNYPHPSVQGSQD*LAPDAGLGESQNSI
Trigger: AATGGAGTTCTGTGACTCCCCAAGGCCTGCATCAGGTGCCAGTCAATCCTGGGAACCCTGGACTGAAGGGTGAGGATAGTTCCCCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS CCA 90 bp GGGGGAACTATCCTCACCCTTCAGTCCAGGGTTCCCAGGATTGACTaGCACCTGATGCAGGCCTTGGGGAGTCACAGAACTCCATTCTTC +
Preference number: 5 (lower is better)
Translates to: GGTILTLQSRVPRID*HLMQALGSHRTPFF
Trigger: GAAGAATGGAGTTCTGTGACTCCCCAAGGCCTGCATCAGGTGCCAGTCAATCCTGGGAACCCTGGACTGAAGGGTGAGGATAGTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp AGAGCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGATGATGGTGGACACCTaGTCATCACGGATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RAWGERETQRGSLGRSDRMMVDT*SSRISL
Trigger: CAAGGAGATCCGTGATGACAAGGTGTCCACCATCAT...CCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp GGGGTAGTTGAAGGACTTGAGGATTCGGGAGACCGCCAAGCTGACGTCCTCGTTTTGGTTCTCTGCCCTTaGCTGTTGAACTCGACCCGC +
Preference number: 5 (lower is better)
Translates to: GVVEGLEDSGDRQADVLVLVLCP*LLNSTR
Trigger: GCGGGTCGAGTTCAACAGCAAAGGGCAGAGAACCAA...AACGAGGACGTCAGCTTGGCGGTCTCCCGAATCCTCAAGTCCTTCAACTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp TGGAGAAAGACCGAGAAGAGAAGCAGTCTAAGGACTGAGCCCTGGAGCCCCACAAGTGTCTGCGACAGGTaGATGTCCAGGGTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: WRKTEKRSSLRTEPWSPTSVCDR*MSRVVA
Trigger: TGCCACCACCCTGGACATCAACCTGTCGCAGACACT...TGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTTCTCTTCTCGGTCTTTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp TGGAGAAAGACCGAGAAGAGAAGCAGTCTAAGGACTGAGCCCTGGAGCCCCACAAGGTCTGCCTTCCGGTaGATGAGCTCGCCAACCATG +
Preference number: 5 (lower is better)
Translates to: WRKTEKRSSLRTEPWSPTRSAFR*MSSPTM
Trigger: CATGGTTGGCGAGCTCATCAACCGGAAGGCAGACCT...TGTGGGGCTCCAGGGCTCAGTCCTTAGACTGCTTCTCTTCTCGGTCTTTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp CAGGCTGACAGACGCGAAGCGAAGGTACTGAAGGCGGGGTGTCTCCTCGGGACCAGCTGTTGTTTTTGCTaGTCCAGTGCCTGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: QADRREAKVLKAGCLLGTSCCFC*SSACSH
Trigger: ATGAGAACAGGCACTGGACAAGCAAAAACAACAGCT...GGTCCCGAGGAGACACCCCGCCTTCAGTACCTTCGCTTCGCGTCTGTCAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAAGCAGGCACTCAGCCTaGGCGCAGATGAGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: PFGWWDHSSSGERPRREASRHSA*AQMRLA
Trigger: GGCCAGCCTCATCTGCGCCAAGGCTGAGTGCCTGCT...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp GCCTGGGGAGAAAGAGAAACCCAACGAGGGAGCCTGGGAAGGAGTGACCGGAGATTTCAGACATGGAAGTaGCTGGTGACAAGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: AWGERETQRGSLGRSDRRFQTWK*LVTRVA
Trigger: AGCCACTCTTGTCACCAGCAACTTCCATGTCTGAAA...TCTCCGGTCACTCCTTCCCAGGCTCCCTCGTTGGGTTTCTCTTTCTCCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGACAGGGCCTGGAAGTaGGGCCGGCGCATGACGTAT +
Preference number: 5 (lower is better)
Translates to: PFGWWDHSSSGERPRREADRAWK*GRRMTY
Trigger: ATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTC...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAACCTCGATGATCCCGTaGATCTGCTCCCGGGCCAAG +
Preference number: 5 (lower is better)
Translates to: PFGWWDHSSSGERPRREATSMIP*ICSRAK
Trigger: CTTGGCCCGGGAGCAGATCAACGGGATCATCGAGGT...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTCCTCGGGACCCACCTaGATGTGGGGGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQSSGPT*MWGISF
Trigger: GAAGGAGATCCCCCACATCAAGGTGGGTCCCGAGGA...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp TTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTCCCGTGGGGCCAAATGTaGGCCGATGTACAGGCCAGA +
Preference number: 5 (lower is better)
Translates to: FGWWDHSSSGERPRREAVPWGQM*ADVQAR
Trigger: TCTGGCCTGTACATCGGCCAACATTTGGCCCCACGG...GACTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTGACCACCAGGGTCTaGTTGGCCAGTGTCTGCGAC +
Preference number: 5 (lower is better)
Translates to: PFGWWDHSSSGERPRREAVTTRV*LASVCD
Trigger: GTCGCAGACACTGGCCAACAAGACCCTGGTGGTCAC...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp TTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTCTGGGTGAGGTTGCAGTaGAGGCGCCGGTGGTATTCG +
Preference number: 5 (lower is better)
Translates to: FGWWDHSSSGERPRREAVWVRLQ*RRRWYS
Trigger: CGAATACCACCGGCGCCTCAACTGCAACCTCACCCA...GACTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp GGGGTAGTTGAAGGACTTGAGGATTCGGGAGACCGCCAAGCTGACGTCCTCGTTGGAAAGCTGTTGTTTTaGCTTGTCCAGTGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: GVVEGLEDSGDRQADVLVGKLLF*LVQCLF
Trigger: GAACAGGCACTGGACAAGCAAAAACAACAGCTTTCC...AACGAGGACGTCAGCTTGGCGGTCTCCCGAATCCTCAAGTCCTTCAACTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS GCA 90 bp GGTTGCGGATCCTGGAGCCCGGACCAGGCAGGTAGAGCAGGAATCTaGTTGCTGAGCACGGTTGATTTATTCATAGTACACATTTCTCAC +
Preference number: 5 (lower is better)
Translates to: GCGSWSPDQAGRAGI*LLSTVDLFIVHISH
Trigger: GTGAGAAATGTGTACTATGAATAAATCAACCGTGCTCAGCAAGCAGATTCCTGCTCTACCTGCCTGGTCCGGGCTCCAGGATCCGCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454993.6
CDS-3UTR CAA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAAAGGGGTGGGACGTGTaGAACATGGAGAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PFGWWDHSSSGERPRREAKGWDV*NMEKPR
Trigger: CCTGGGCTTCTCCATGTTCAACACGTCCCACCCCTT...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp CCATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGGAAACCACAGGCTGTaGCCCAGCGTGTACTGGTTC +
Preference number: 5 (lower is better)
Translates to: PFGWWDHSSSGERPRREAGNHRL*PSVYWF
Trigger: GAACCAGTACACGCTGGGCAACAGCCTGTGGTTTCC...TGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS CCA 90 bp GGAGGTGGAAAGCTGTTGTTTTTGCTTGTCCAGTGCCTGTTCTCATaGCAGAACCCTAACTTCTCCTGGGGGAACTATCCTCACCCTTCA +
Preference number: 5 (lower is better)
Translates to: GGGKLLFLLVQCLFS*QNPNFSWGNYPHPS
Trigger: TGAAGGGTGAGGATAGTTCCCCCAGGAGAAGTTAGGGTTCTGCCATGAGAACAGGCACTGGACAAGCAAAAACAACAGCTTTCCACCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS-3UTR CAA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTCCCTCCAGGACATGTaGAGGCTGCGGACAAACTCA +
Preference number: 5 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQSLQDM*RLRTNS
Trigger: TGAGTTTGTCCGCAGCCTCAACATGTCCTGGAGGGA...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS-3UTR CAA 90 bp CATTTGGCTGGTGGGATCATTCAAGTAGTGGAGAAAGACCGAGAAGAGAAGCAGTTGGTTCTCTGCCCTTaGCTGTTGAACTCGACCCGC +
Preference number: 5 (lower is better)
Translates to: HLAGGIIQVVEKDREEKQLVLCP*LLNSTR
Trigger: GCGGGTCGAGTTCAACAGCAAAGGGCAGAGAACCAA...CTGCTTCTCTTCTCGGTCTTTCTCCACTACTTGAATGATCCCACCAGCCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS CCA 72 bp CCCGAGGCCCGCAGCGCCTGGATGCGCCGGCACTCCTaGCAGACGCGCACGTGGGTGCAGGGGGTGGGGGCG +
Preference number: 6 (lower is better)
Translates to: PEARSAWMRRHS*QTRTWVQGVGA
Trigger: CGCCCCCACCCCCTGCACCCACGTGCGCGTCTGCCAGGAGTGCCGGCGCATCCAGGCGCTGCGGGCCTCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262895.7
ENST00000454993.6
ENST00000593562.5
CDS CCA 72 bp CTTCGGTCAGTCCGGGCGCCCGCACAGCCCCGCCCGTaGTCACTCGTGCTCCGCCAGCTCCCGGGGGCCGGC +
Preference number: 6 (lower is better)
Translates to: LRSVRAPAQPRP*SLVLRQLPGAG
Trigger: GCCGGCCCCCGGGAGCTGGCGGAGCACGAGTGACCACGGGCGGGGCTGTGCGGGCGCCCGGACTGACCGAAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262895.7
ENST00000454993.6
ENST00000593562.5
CDS CAA 90 bp CGGCTCGGGCCGCCCGGGCGTCGGCGCCGGCGGGAACGCGACGTCTaGCGGCAAGAAACGGCGTGGCGCAGCTCCTGCAGCATCTCCTGG +
Preference number: 6 (lower is better)
Translates to: RLGPPGRRRRRERDV*RQETAWRSSCSISW
Trigger: CCAGGAGATGCTGCAGGAGCTGCGCCACGCCGTTTCTTGCCGCAAGACGTCGCGTTCCCGCCGGCGCCGACGCCCGGGCGGCCCGAGCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262895.7
ENST00000454993.6
ENST00000593562.5
CDS GCA 72 bp GGGCTCCCTCGAGGCCCGAAGACCGACAGCGGGAGGTaGTCTGGCGCTGGGTGGTGGTGGGGCTGGGCGGGG +
Preference number: 6 (lower is better)
Translates to: GLPRGPKTDSGR*SGAGWWWGWAG
Trigger: CCCCGCCCAGCCCCACCACCACCCAGCGCCAGAGCACCTCCCGCTGTCGGTCTTCGGGCCTCGAGGGAGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593562.5
CDS CAA 72 bp CCGCCCGGGCGTCGGCGCCGGCGGGAACGCGACGTCTaGCGGCAAGAAACGGCGTGGCGCAGCTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: PPGRRRRRERDV*RQETAWRSSCS
Trigger: GCTGCAGGAGCTGCGCCACGCCGTTTCTTGCCGCAAGACGTCGCGTTCCCGCCGGCGCCGACGCCCGGGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262895.7
ENST00000454993.6
ENST00000593562.5
CDS GCA 72 bp CGCCCGGGCGTCGGCGCCGGCGGGAACGCGACGTCTTaGGGCAAGAAACGGCGTGGCGCAGCTCCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: RPGVGAGGNATS*GKKRRGAAPAA
Trigger: TGCTGCAGGAGCTGCGCCACGCCGTTTCTTGCCGCAAGACGTCGCGTTCCCGCCGGCGCCGACGCCCGGGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262895.7
ENST00000454993.6
ENST00000593562.5
CDS TCA 72 bp CCCCGCCCGCGCCGGCCGAGTAGAGCTTGCCGTTGCTaGGGCGCATCTCGCGGACCGCGCGCAGTGACAGCA +
Preference number: 6 (lower is better)
Translates to: PRPRRPSRACRC*GASRGPRAVTA
Trigger: TGCTGTCACTGCGCGCGGTCCGCGAGATGCGCCTCAGCAACGGCAAGCTCTACTCGGCCGGCGCGGGCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262895.7
ENST00000454993.6
ENST00000593562.5
CDS CCA 72 bp CCCCCACTCGCCACGGATCCTGGTGGGACGGAGGGCTaGGCTCCCTCGAGGCCCGAAGACCGACAGCGGGAG +
Preference number: 6 (lower is better)
Translates to: PPLATDPGGTEG*APSRPEDRQRE
Trigger: CTCCCGCTGTCGGTCTTCGGGCCTCGAGGGAGCCCAGCCCTCCGTCCCACCAGGATCCGTGGCGAGTGGGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593562.5
CDS GCA 72 bp CGGGCCTTGGCTGGGACCTCGATGATCCCGTTGATCTaGTCCCGGGCCAAGGCCAAGGCCAGACGCTCACCG +
Preference number: 6 (lower is better)
Translates to: RALAGTSMIPLI*SRAKAKARRSP
Trigger: CGGTGAGCGTCTGGCCTTGGCCTTGGCCCGGGAGCAGATCAACGGGATCATCGAGGTCCCAGCCAAGGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262895.7
ENST00000301218.8
ENST00000593562.5
ENST00000594528.1
CDS CCA 72 bp CGGCGGGAACGCGACGTCTTGCGGCAAGAAACGGCGTaGCGCAGCTCCTGCAGCATCTCCTGGCACACCGAC +
Preference number: 6 (lower is better)
Translates to: RRERDVLRQETA*RSSCSISWHTD
Trigger: GTCGGTGTGCCAGGAGATGCTGCAGGAGCTGCGCCACGCCGTTTCTTGCCGCAAGACGTCGCGTTCCCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262895.7
ENST00000454993.6
ENST00000593562.5
CDS CCA 72 bp AACGGTGGCTCCACAGGAGCAGGGAGGAAGGACAGGTaGAAGAGGAGAGGGCGGGCCGGGGAGGGGAGGAAG +
Preference number: 6 (lower is better)
Translates to: NGGSTGAGRKDR*KRRGRAGEGRK
Trigger: CTTCCTCCCCTCCCCGGCCCGCCCTCTCCTCTTCCACCTGTCCTTCCTCCCTGCTCCTGTGGAGCCACCGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593562.5
CDS CCA 72 bp GATGGCCAGTGTGATCTCATCCCGGAACGGGGAGCCTaGGCAGGCACACGAGGGGCTGGACCAGCCATCGGG +
Preference number: 6 (lower is better)
Translates to: DGQCDLIPERGA*AGTRGAGPAIG
Trigger: CCCGATGGCTGGTCCAGCCCCTCGTGTGCCTGCCCAGGCTCCCCGTTCCGGGATGAGATCACACTGGCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602210.1
CDS CAA 72 bp TCCACTCGGGCCTTGGCTGGGACCTCGATGATCCCGTaGATCTGCTCCCGGGCCAAGGCCAAGGCCAGACGC +
Preference number: 6 (lower is better)
Translates to: STRALAGTSMIP*ICSRAKAKARR
Trigger: GCGTCTGGCCTTGGCCTTGGCCCGGGAGCAGATCAACGGGATCATCGAGGTCCCAGCCAAGGCCCGAGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262895.7
ENST00000301218.8
ENST00000593562.5
ENST00000594528.1
CDS CAA 72 bp CCCTCGAAGCGTTCGTTCCCCGACAGGGCCTGGAAGTaGGGCCGGCGCATGACGTATGGGTTCTCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: PSKRSFPDRAWK*GRRMTYGFSWV
Trigger: CACCCAGGAGAACCCATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTCGGGGAACGAACGCTTCGAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454993.6
CDS CAA 90 bp ATGTCTACTTCCACTCGGGCCTTGGCTGGGACCTCGATGATCCCGTaGATCTGCTCCCGGGCCAAGGCCAAGGCCAGACGCTCACCGCGG +
Preference number: 6 (lower is better)
Translates to: MSTSTRALAGTSMIP*ICSRAKAKARRSPR
Trigger: CCGCGGTGAGCGTCTGGCCTTGGCCTTGGCCCGGGAGCAGATCAACGGGATCATCGAGGTCCCAGCCAAGGCCCGAGTGGAAGTAGACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262895.7
ENST00000301218.8
ENST00000593562.5
ENST00000594528.1
CDS TCA 72 bp CGTTCCCCGACAGGGCCTGGAAGTTGGGCCGGCGCATaGCGTATGGGTTCTCCTGGGTGGGCAGAAGAAAGC +
Preference number: 6 (lower is better)
Translates to: RSPTGPGSWAGA*RMGSPGWAEES
Trigger: GCTTTCTTCTGCCCACCCAGGAGAACCCATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTCGGGGAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454993.6
CDS CCA 72 bp CGACAGGGCCTGGAAGTTGGGCCGGCGCATGACGTATaGGTTCTCCTGGGTGGGCAGAAGAAAGCAGGGGTC +
Preference number: 6 (lower is better)
Translates to: RQGLEVGPAHDV*VLLGGQKKAGV
Trigger: GACCCCTGCTTTCTTCTGCCCACCCAGGAGAACCCATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454993.6
CDS CAA 90 bp ACGCAGAAGCCCTCGAAGCGTTCGTTCCCCGACAGGGCCTGGAAGTaGGGCCGGCGCATGACGTATGGGTTCTCCTGGGTGGGCAGAAGA +
Preference number: 6 (lower is better)
Translates to: TQKPSKRSFPDRAWK*GRRMTYGFSWVGRR
Trigger: TCTTCTGCCCACCCAGGAGAACCCATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTCGGGGAACGAACGCTTCGAGGGCTTCTGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454993.6
CDS GCA 72 bp CTTGGGCCAAGTGCAGAACACTGGCAGGCAGCTGGATaGAGAGCTGGGGTCTCCTCGGACTCAGCTGACCTC +
Preference number: 6 (lower is better)
Translates to: LGPSAEHWQAAG*RAGVSSDSADL
Trigger: GAGGTCAGCTGAGTCCGAGGAGACCCCAGCTCTGCATCCAGCTGCCTGCCAGTGTTCTGCACTTGGCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS CAA 90 bp TGGCTGTCCCGCTGCAGCTCAAAGATGTCTACTTCCACTCGGGCCTaGGCTGGGACCTCGATGATCCCGTTGATCTGCTCCCGGGCCAAG +
Preference number: 6 (lower is better)
Translates to: WLSRCSSKMSTSTRA*AGTSMIPLICSRAK
Trigger: CTTGGCCCGGGAGCAGATCAACGGGATCATCGAGGTCCCAGCCAAGGCCCGAGTGGAAGTAGACATCTTTGAGCTGCAGCGGGACAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262895.7
ENST00000301218.8
ENST00000593562.5
ENST00000594528.1
CDS TCA 72 bp GCCAAGGCCAGACGCTCACCGCGGCCACACACTGTCTaGTCATCCAGGATTGCAGCCATGCGCAGTGATGAG +
Preference number: 6 (lower is better)
Translates to: AKARRSPRPHTV*SSRIAAMRSDE
Trigger: CTCATCACTGCGCATGGCTGCAATCCTGGATGATCAGACAGTGTGTGGCCGCGGTGAGCGTCTGGCCTTGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262895.7
ENST00000301218.8
ENST00000593562.5
ENST00000594528.1
CDS GCA 72 bp CATGGACGGCTCCTTCAGAGGAGTCCTTGGGCCAAGTaGAGAACACTGGCAGGCAGCTGGATGCAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: HGRLLQRSPWAK*RTLAGSWMQSW
Trigger: CCAGCTCTGCATCCAGCTGCCTGCCAGTGTTCTGCACTTGGCCCAAGGACTCCTCTGAAGGAGCCGTCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS CCA 72 bp TTGCAGCCATGCGCAGTGATGAGAGCACCTGGCAGCTaGGGCTGGCGAAGGCAACAATCAGCAGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: LQPCAVMRAPGS*GWRRQQSAAAA
Trigger: TGCTGCTGCTGCTGATTGTTGCCTTCGCCAGCCCCAGCTGCCAGGTGCTCTCATCACTGCGCATGGCTGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262895.7
ENST00000301218.8
ENST00000593562.5
ENST00000594528.1
CDS CCA 72 bp CCTGGACACGGGTGGAGGGCACCTTTACTAGCAGCATaGACGGCTCCTTCAGAGGAGTCCTTGGGCCAAGTG +
Preference number: 6 (lower is better)
Translates to: PGHGWRAPLLAA*TAPSEESLGQV
Trigger: CACTTGGCCCAAGGACTCCTCTGAAGGAGCCGTCCATGCTGCTAGTAAAGGTGCCCTCCACCCGTGTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS TCA 72 bp CAGGAGGAAAGGACAGACTTGCCGGAGGGATGTCCTTaGGAAGGCAACCTGGACACGGGTGGAGGGCACCTT +
Preference number: 6 (lower is better)
Translates to: QEERTDLPEGCP*EGNLDTGGGHL
Trigger: AAGGTGCCCTCCACCCGTGTCCAGGTTGCCTTCTCAAGGACATCCCTCCGGCAAGTCTGTCCTTTCCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS TCA 72 bp CATCTCCTGGCACACCGACACCTCCTCGGACTCAGCTaGCCTCCGTGTGGACCATATGAATTCCATGACCGC +
Preference number: 6 (lower is better)
Translates to: HLLAHRHLLGLS*PPCGPYEFHDR
Trigger: GCGGTCATGGAATTCATATGGTCCACACGGAGGTCAGCTGAGTCCGAGGAGGTGTCGGTGTGCCAGGAGATG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262895.7
ENST00000454993.6
ENST00000593562.5
ENST00000602210.1
CDS CAA 72 bp CGCTGCAGCTCAAAGATGTCTACTTCCACTCGGGCCTaGGCTGGGACCTCGATGATCCCGTTGATCTGCTCC +
Preference number: 6 (lower is better)
Translates to: RCSSKMSTSTRA*AGTSMIPLICS
Trigger: GGAGCAGATCAACGGGATCATCGAGGTCCCAGCCAAGGCCCGAGTGGAAGTAGACATCTTTGAGCTGCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262895.7
ENST00000301218.8
ENST00000593562.5
ENST00000594528.1
CDS TCA 72 bp CCCTTCAGTCCAGGGTTCCCAGGATTGACTGGCACCTaGTGCAGGCCTTGGGGAGTCACAGAACTCCATTCT +
Preference number: 6 (lower is better)
Translates to: PFSPGFPGLTGT*CRPWGVTELHS
Trigger: AGAATGGAGTTCTGTGACTCCCCAAGGCCTGCATCAGGTGCCAGTCAATCCTGGGAACCCTGGACTGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS TCA 72 bp AACTATCCTCACCCTTCAGTCCAGGGTTCCCAGGATTaGCTGGCACCTGATGCAGGCCTTGGGGAGTCACAG +
Preference number: 6 (lower is better)
Translates to: NYPHPSVQGSQD*LAPDAGLGESQ
Trigger: CTGTGACTCCCCAAGGCCTGCATCAGGTGCCAGTCAATCCTGGGAACCCTGGACTGAAGGGTGAGGATAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS CCA 72 bp ATCCTCACCCTTCAGTCCAGGGTTCCCAGGATTGACTaGCACCTGATGCAGGCCTTGGGGAGTCACAGAACT +
Preference number: 6 (lower is better)
Translates to: ILTLQSRVPRID*HLMQALGSHRT
Trigger: AGTTCTGTGACTCCCCAAGGCCTGCATCAGGTGCCAGTCAATCCTGGGAACCCTGGACTGAAGGGTGAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594528.1
CDS CAA 72 bp TTACTAGCAGCATGGACGGCTCCTTCAGAGGAGTCCTaGGGCCAAGTGCAGAACACTGGCAGGCAGCTGGAT +
Preference number: 6 (lower is better)
Translates to: LLAAWTAPSEES*GQVQNTGRQLD
Trigger: ATCCAGCTGCCTGCCAGTGTTCTGCACTTGGCCCAAGGACTCCTCTGAAGGAGCCGTCCATGCTGCTAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS CAA 90 bp AGTGAGGTCAGGAGAGGGTTTAAGACTGGAGAAATGACAGCATATTaGTACGTTGGTGGCCTGAATCCAATAAAGAGAGGACAACTGATG +
Preference number: 6 (lower is better)
Translates to: SEVRRGFKTGEMTAY*YVGGLNPIKRGQLM
Trigger: CATCAGTTGTCCTCTCTTTATTGGATTCAGGCCACCAACGTACAAATATGCTGTCATTTCTCCAGTCTTAAACCCTCTCCTGACCTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8
CDS CAA 72 bp AGGAGAGGGTTTAAGACTGGAGAAATGACAGCATATTaGTACGTTGGTGGCCTGAATCCAATAAAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: RRGFKTGEMTAY*YVGGLNPIKRG
Trigger: TCCTCTCTTTATTGGATTCAGGCCACCAACGTACAAATATGCTGTCATTTCTCCAGTCTTAAACCCTCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301218.8