RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRIK4 (Homo sapiens)

Ensembl gene IDs: ENSG00000149403

Ensembl transcript IDs: ENST00000438375.2, ENST00000526536.1, ENST00000527130.5, ENST00000527524.8, ENST00000530172.1, ENST00000533291.5, ENST00000638419.1

Found 658 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTaGTCCCTGACCGGGCGCGGTCTCTGGCTGGGGCGTCAGGCTCCT +
Preference number: 1 (lower is better)
Translates to: RAVLCPLGATFPGGP*SLTGRGLWLGRQAP
Trigger: AGGAGCCTGACGCCCCAGCCAGAGACCGCGCCCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR CCA 90 bp AGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTaGACCCTGCTCCCTGACCGGGCGCGGTCTCTGGCTGGGGCGTCA +
Preference number: 1 (lower is better)
Translates to: RREGRPLPFGCNVSG*TLLPDRARSLAGAS
Trigger: TGACGCCCCAGCCAGAGACCGCGCCCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR GCA 90 bp TGGGTCCTTGTGCCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTaGAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGGCGCGGTCT +
Preference number: 1 (lower is better)
Translates to: WVLVPRREGRPLPFG*NVSGWTLLPDRARS
Trigger: AGACCGCGCCCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGGCACAAGGACCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR TCA 90 bp TCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTaGCCGGGCGCGGTCTCTGGCTGGGGCGTCAGGCTCCTTGATCTT +
Preference number: 1 (lower is better)
Translates to: SFALWVQRFRVDPAP*PGAVSGWGVRLLDL
Trigger: AAGATCAAGGAGCCTGACGCCCCAGCCAGAGACCGCGCCCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR GCA 90 bp CTGGGAGAAGATGGGTCCTTGTGCCCAGGAGGGAGGGCCGTCCTTTaGCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACC +
Preference number: 1 (lower is better)
Translates to: LGEDGSLCPGGRAVL*PLGATFPGGPCSLT
Trigger: GGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGGCACAAGGACCCATCTTCTCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR TCA 90 bp AAGTATGCACCATACCAACGGGGTGGCCCAGTCCTTCCGCCTCTGTaGACGGCACGTTCCACCGGAAGCCAAGGCCATGGTATGGGAAAA +
Preference number: 1 (lower is better)
Translates to: KYAPYQRGGPVLPPL*TARSTGSQGHGMGK
Trigger: TTTTCCCATACCATGGCCTTGGCTTCCGGTGGAACGTGCCGTTCACAGAGGCGGAAGGACTGGGCCACCCCGTTGGTATGGTGCATACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR GCA 90 bp GAGCAGAGTGGCACCATTGGGGTTTGTTGTCAGCTGGCCTTCGGGTaGCCTTCCCACCAAATCCACGTTTCTCCACGAGGATCAAGGCAA +
Preference number: 1 (lower is better)
Translates to: EQSGTIGVCCQLAFG*PSHQIHVSPRGSRQ
Trigger: TTGCCTTGATCCTCGTGGAGAAACGTGGATTTGGTGGGAAGGGCACCCGAAGGCCAGCTGACAACAAACCCCAATGGTGCCACTCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR CCA 90 bp CCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTaGGAGAAGATGGGTCCTTGTGCCCAGGAGGGAGGGCCGTCCTTT +
Preference number: 1 (lower is better)
Translates to: PHPILLLFWREGKTH*EKMGPCAQEGGPSF
Trigger: AAAGGACGGCCCTCCCTCCTGGGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR CCA 90 bp GAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTaGGGTTTGTTGTCAGCTGGCCTTCGGGTGCCCTTCCCACCAAAT +
Preference number: 1 (lower is better)
Translates to: EKHRMELQVGAEWHH*GLLSAGLRVPFPPN
Trigger: ATTTGGTGGGAAGGGCACCCGAAGGCCAGCTGACAACAAACCCCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR CCA 90 bp GTTGTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTaGCACCATTGGGGTTTGTTGTCAGCTGGCCTTCGGGTGCCCTTC +
Preference number: 1 (lower is better)
Translates to: VVCEKHRMELQVGAE*HHWGLLSAGLRVPF
Trigger: GAAGGGCACCCGAAGGCCAGCTGACAACAAACCCCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR CCA 90 bp TTGAAAAGAGATGCAGTTGACAAAGTATGCACCATACCAACGGGGTaGCCCAGTCCTTCCGCCTCTGTGAACGGCACGTTCCACCGGAAG +
Preference number: 1 (lower is better)
Translates to: LKRDAVDKVCTIPTG*PSPSASVNGTFHRK
Trigger: CTTCCGGTGGAACGTGCCGTTCACAGAGGCGGAAGGACTGGGCCACCCCGTTGGTATGGTGCATACTTTGTCAACTGCATCTCTTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR CCA 90 bp CGCCTCTGTGAACGGCACGTTCCACCGGAAGCCAAGGCCATGGTATaGGAAAATTCTATCTGCTCTTTCCGCTCCTTAAACAAAGTCCTA +
Preference number: 1 (lower is better)
Translates to: RLCERHVPPEAKAMV*ENSICSFRSLNKVL
Trigger: TAGGACTTTGTTTAAGGAGCGGAAAGAGCAGATAGAATTTTCCCATACCATGGCCTTGGCTTCCGGTGGAACGTGCCGTTCACAGAGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR TCA 90 bp TGGCATCTCAAAGTTTACTGCAATGGACTTTTGAGACTCTCCATCTaGTTCTTCCCAAGACTCCTTCTCCTGTGCTCCTGCAGGCCCCTC +
Preference number: 1 (lower is better)
Translates to: WHLKVYCNGLLRLSI*FFPRLLLLCSCRPL
Trigger: GAGGGGCCTGCAGGAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
3UTR GCA 90 bp AAATACACACACGCACACGCGCGCACACATACACACACATACACTTaGACCCAGGTCTCACGTCTAAGTAGCAAGAAACCACCCAATCCA +
Preference number: 1 (lower is better)
Translates to: KYTHAHARTHTHTYT*TQVSRLSSKKPPNP
Trigger: TGGATTGGGTGGTTTCTTGCTACTTAGACGTGAGACCTGGGTGCAAGTGTATGTGTGTGTATGTGTGCGCGCGTGTGCGTGTGTGTATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR GCA 90 bp CACGTTCCACCGGAAGCCAAGGCCATGGTATGGGAAAATTCTATCTaGTCTTTCCGCTCCTTAAACAAAGTCCTAGGATACTTTGTGCAT +
Preference number: 1 (lower is better)
Translates to: HVPPEAKAMVWENSI*SFRSLNKVLGYFVH
Trigger: ATGCACAAAGTATCCTAGGACTTTGTTTAAGGAGCGGAAAGAGCAGATAGAATTTTCCCATACCATGGCCTTGGCTTCCGGTGGAACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR TCA 90 bp TCCATGATAGTCTTGGGGGTCTGGCTTCATAGGCAGCCACTCATTTaGGTTTGGTTGAAAAGAGATGCAGTTGACAAAGTATGCACCATA +
Preference number: 1 (lower is better)
Translates to: SMIVLGVWLHRQPLI*VWLKRDAVDKVCTI
Trigger: TATGGTGCATACTTTGTCAACTGCATCTCTTTTCAACCAAACTCAAATGAGTGGCTGCCTATGAAGCCAGACCCCCAAGACTATCATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR TCA 90 bp AAATTGCATAGAATTTGTTTTCCATCAGCCAATGAGAACTCTGCGTaGAACTCCCAATTAGTGAAGCCAAGCAAAGGTCAAGCAGCTGTA +
Preference number: 1 (lower is better)
Translates to: KLHRICFPSANENSA*NSQLVKPSKGQAAV
Trigger: TACAGCTGCTTGACCTTTGCTTGGCTTCACTAATTGGGAGTTTCACGCAGAGTTCTCATTGGCTGATGGAAAACAAATTCTATGCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR CAA 90 bp GAAGATGGGTCCTTGTGCCCAGGAGGGAGGGCCGTCCTTTGCCCTTaGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGGCGC +
Preference number: 2 (lower is better)
Translates to: EDGSLCPGGRAVLCP*GATFPGGPCSLTGR
Trigger: GCGCCCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGGCACAAGGACCCATCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR-3UTR CCA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGTGTACAAGTTCCGGCTaGCGGCTGACAGCAGCGCCC +
Preference number: 2 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRCTSSG*RLTAAP
Trigger: GGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACA...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR CAA 90 bp ACTGGGAGAAGATGGGTCCTTGTGCCCAGGAGGGAGGGCCGTCCTTaGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGAC +
Preference number: 2 (lower is better)
Translates to: TGRRWVLVPRREGRP*PFGCNVSGWTLLPD
Trigger: GTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGGCACAAGGACCCATCTTCTCCCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR-3UTR CCA 90 bp AGGTCAAGCAGCTGTAGAAAGCCTCGCCCCTCCCATCAGATGTGTGCTCTGGACGGCGCGGTCTCTGGCTaGGGCGTCAGGCTCCTTGAT +
Preference number: 2 (lower is better)
Translates to: RSSSCRKPRPSHQMCALDGAVSG*GVRLLD
Trigger: ATCAAGGAGCCTGACGCCCCAGCCAGAGACCGCGCC...GTCCAGAGCACACATCTGATGGGAGGGGCGAGGCTTTCTACAGCTGCTTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR TCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGGTGGACCCTGCTCCCTaGCCGGGCGCGGTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: SCYFGERERPTGRRWVLVVDPAP*PGAVSG
Trigger: GCCAGAGACCGCGCCCGGTCAGGGAGCAGGGTCCAC...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR-3UTR GCA 90 bp ACGCACACGCGCGCACACATACACACACATACACTTGCACCCAGGTCTCACGTCGAAGATGGGTCCTTGTaGCCAGGAGGGAGGGCCGTC +
Preference number: 2 (lower is better)
Translates to: THTRAHIHTHTLAPRSHVEDGSL*PGGRAV
Trigger: GACGGCCCTCCCTCCTGGGCACAAGGACCCATCTTC...GACGTGAGACCTGGGTGCAAGTGTATGTGTGTGTATGTGTGCGCGCGTGTGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR CAA 90 bp GTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTaGTGCCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACG +
Preference number: 2 (lower is better)
Translates to: VILARGKDPLGEDGS*CPGGRAVLCPLGAT
Trigger: CGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR-3UTR TCA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCGTGGACCCTGCTCCCTaGCCGGGCGCGGTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: WTFETLHLILPKTPSPVLVDPAP*PGAVSG
Trigger: GCCAGAGACCGCGCCCGGTCAGGGAGCAGGGTCCAC...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
3UTR-3UTR GCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCTTTCCGGGTGGACCCTaGTCCCTGACCGGGCGCGGT +
Preference number: 2 (lower is better)
Translates to: LLFWREGKTHWEKMGPCAFPGGP*SLTGRG
Trigger: ACCGCGCCCGGTCAGGGAGCAGGGTCCACCCGGAAA...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR-3UTR CCA 90 bp ACGCACACGCGCGCACACATACACACACATACACTTGCACCCAGGTCTCACGTCACCATACCAACGGGGTaGCCCAGTCCTTCCGCCTCT +
Preference number: 2 (lower is better)
Translates to: THTRAHIHTHTLAPRSHVTIPTG*PSPSAS
Trigger: AGAGGCGGAAGGACTGGGCCACCCCGTTGGTATGGT...GACGTGAGACCTGGGTGCAAGTGTATGTGTGTGTATGTGTGCGCGCGTGTGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR CAA 90 bp AGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGGGTTTGTaGTCAGCTGGCCTTCGGGTGCCCTTCCCACCAAATCCACGTTTC +
Preference number: 2 (lower is better)
Translates to: RMELQVGAEWHHWGL*SAGLRVPFPPNPRF
Trigger: GAAACGTGGATTTGGTGGGAAGGGCACCCGAAGGCCAGCTGACAACAAACCCCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR CAA 90 bp CATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGGGTTaGTTGTCAGCTGGCCTTCGGGTGCCCTTCCCACCAAATCCACGT +
Preference number: 2 (lower is better)
Translates to: HRMELQVGAEWHHWG*LSAGLRVPFPPNPR
Trigger: ACGTGGATTTGGTGGGAAGGGCACCCGAAGGCCAGCTGACAACAAACCCCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR GCA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTTTCCGGGTGGACCCTaGTCCCTGACCGGGCGCGGT +
Preference number: 2 (lower is better)
Translates to: PYTLVILARGKDPLGEDGFPGGP*SLTGRG
Trigger: ACCGCGCCCGGTCAGGGAGCAGGGTCCACCCGGAAA...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR-3UTR GCA 90 bp ACGCACACGCGCGCACACATACACACACATACACTTGCACCCAGGTCTCACGTCGGGAGGGCCGTCCTTTaGCCTTTGGGTGCAACGTTT +
Preference number: 2 (lower is better)
Translates to: THTRAHIHTHTLAPRSHVGRAVL*PLGATF
Trigger: AAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCC...GACGTGAGACCTGGGTGCAAGTGTATGTGTGTGTATGTGTGCGCGCGTGTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR GCA 90 bp ACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGTTTCCGGGTGGACCCTaGTCCCTGACCGGGCGCGGT +
Preference number: 2 (lower is better)
Translates to: TLYSCYFGERERPTGRRWFPGGP*SLTGRG
Trigger: ACCGCGCCCGGTCAGGGAGCAGGGTCCACCCGGAAA...CCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR-3UTR CCA 90 bp GTTCCACCGGAAGCCAAGGCCATGGTATGGGAAAATTCTATCTGCTCTTTCCGCTGTACAAGTTCCGGCTaGCGGCTGACAGCAGCGCCC +
Preference number: 2 (lower is better)
Translates to: VPPEAKAMVWENSICSFRCTSSG*RLTAAP
Trigger: GGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACA...GCGGAAAGAGCAGATAGAATTTTCCCATACCATGGCCTTGGCTTCCGGTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR CCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCTGCAACGTTTCCGGGTaGACCCTGCTCCCTGACCGG +
Preference number: 2 (lower is better)
Translates to: LLFWREGKTHWEKMGPCACNVSG*TLLPDR
Trigger: CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCA...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR-3UTR CCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGTGCAACGTTTCCGGGTaGACCCTGCTCCCTGACCGG +
Preference number: 2 (lower is better)
Translates to: SCYFGERERPTGRRWVLVCNVSG*TLLPDR
Trigger: CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCA...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR-3UTR CCA 90 bp TCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGGAGACGGAGGGTACATTaGCCCCTGACTAGGGGGAAA +
Preference number: 2 (lower is better)
Translates to: SVRSIGWSCRLEQSGTIGRRRVH*PLTRGK
Trigger: TTTCCCCCTAGTCAGGGGCCAATGTACCCTCCGTCT...CCCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR TCA 90 bp GTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGGGGTACATTGGCCCCTaGCTAGGGGGAAATTCAACT +
Preference number: 2 (lower is better)
Translates to: VCEKHRMELQVGAEWHHWGYIGP*LGGNST
Trigger: AGTTGAATTTCCCCCTAGTCAGGGGCCAATGTACCC...CCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR CCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCTGTACAAGTTCCGGCTaGCGGCTGACAGCAGCGCCC +
Preference number: 2 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPCTSSG*RLTAAP
Trigger: GGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACA...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR-3UTR CCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCTGCAACGTTTCCGGGTaGACCCTGCTCCCTGACCGG +
Preference number: 2 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPCNVSG*TLLPDR
Trigger: CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCA...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR-3UTR CCA 90 bp GTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGCGACTCAAGAGTTCCTaGTTCCCAGGCCCGTGTATT +
Preference number: 2 (lower is better)
Translates to: VCEKHRMELQVGAEWHHWRLKSS*FPGPCI
Trigger: AATACACGGGCCTGGGAACCAGGAACTCTTGAGTCG...CCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR CAA 90 bp AACCACCCTTCCCGCCCCAAATGTGATCTGACAGTAGGAACCACGTaGTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGT +
Preference number: 2 (lower is better)
Translates to: NHPSRPKCDLTVGTT*SVRSIGWSCRLEQS
Trigger: ACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGACAACGTGGTTCCTACTGTCAGATCACATTTGGGGCGGGAAGGGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR TCA 90 bp TTGGCCCCCAGGACGGCAGCCCTAACTGATTGTCCTGGCATAAAGAGGATGCCGAGACAGATTAACCCTTaGCATTCCAGGCGTTTCAAG +
Preference number: 2 (lower is better)
Translates to: LAPRTAALTDCPGIKRMPRQINP*HSRRFK
Trigger: CTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTCT...CGGCATCCTCTTTATGCCAGGACAATCAGTTAGGGCTGCCGTCCTGGGGGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR GCA 90 bp TCCGCCTCTGTGAACGGCACGTTCCACCGGAAGCCAAGGCCATGGTATGGGAAAGCACCTGAAATCGGATaGACTGGTAACGCAATATTC +
Preference number: 2 (lower is better)
Translates to: SASVNGTFHRKPRPWYGKAPEIG*TGNAIF
Trigger: GAATATTGCGTTACCAGTGCATCCGATTTCAGGTGC...TTTCCCATACCATGGCCTTGGCTTCCGGTGGAACGTGCCGTTCACAGAGGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR CCA 90 bp GTATGGGAAAATTCTATCTGCTCTTTCCGCTCCTTAAACAAAGTCCTAGGATACACCGGGCGCGGTCTCTaGCTGGGGCGTCAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: VWENSICSFRSLNKVLGYTGRGL*LGRQAP
Trigger: AGGAGCCTGACGCCCCAGCCAGAGACCGCGCCCGGT...GTATCCTAGGACTTTGTTTAAGGAGCGGAAAGAGCAGATAGAATTTTCCCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
3UTR-3UTR CCA 90 bp ACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGCCGTCCTTTGCCCTTTaGGTGCAACGTTTCCGGGTG +
Preference number: 2 (lower is better)
Translates to: TLYSCYFGERERPTGRRWPSFAL*VQRFRV
Trigger: CACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGG...CCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR-3UTR CCA 90 bp TCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGGCGGAAGCCAAGGCCATaGTATGGGAAAATTCTATCT +
Preference number: 2 (lower is better)
Translates to: SVRSIGWSCRLEQSGTIGRKPRP*YGKILS
Trigger: AGATAGAATTTTCCCATACCATGGCCTTGGCTTCCG...CCCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR TCA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCGGGTACATTGGCCCCTaGCTAGGGGGAAATTCAACT +
Preference number: 2 (lower is better)
Translates to: WTFETLHLILPKTPSPVLGYIGP*LGGNST
Trigger: AGTTGAATTTCCCCCTAGTCAGGGGCCAATGTACCC...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
3UTR-3UTR GCA 90 bp GTATGGGAAAATTCTATCTGCTCTTTCCGCTCCTTAAACAAAGTCCTAGGATACGAAGATGGGTCCTTGTaGCCAGGAGGGAGGGCCGTC +
Preference number: 2 (lower is better)
Translates to: VWENSICSFRSLNKVLGYEDGSL*PGGRAV
Trigger: GACGGCCCTCCCTCCTGGGCACAAGGACCCATCTTC...GTATCCTAGGACTTTGTTTAAGGAGCGGAAAGAGCAGATAGAATTTTCCCATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
3UTR-3UTR CCA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCGAGGGAAAGACCCACTaGGAGAAGATGGGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: WTFETLHLILPKTPSPVLEGKTH*EKMGPC
Trigger: ACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTC...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
3UTR-3UTR CCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCGAGGGAAAGACCCACTaGGAGAAGATGGGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPEGKTH*EKMGPC
Trigger: ACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTC...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR-3UTR TCA 90 bp ACCACCCAATCCATGATAGTCTTGGGGGTCTGGCTTCATAGGCAGCCACTCATTTTGAGACTCTCCATCTaGTTCTTCCCAAGACTCCTT +
Preference number: 2 (lower is better)
Translates to: TTQSMIVLGVWLHRQPLILRLSI*FFPRLL
Trigger: AAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAA...AATGAGTGGCTGCCTATGAAGCCAGACCCCCAAGACTATCATGGATTGGGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR TCA 90 bp GTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGGGTCTGAGTATAGGATaGGTTAATTGCTTTTTGGCA +
Preference number: 2 (lower is better)
Translates to: VCEKHRMELQVGAEWHHWGLSIG*VNCFLA
Trigger: TGCCAAAAAGCAATTAACTCATCCTATACTCAGACC...CCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR TCA 90 bp AGGTCAAGCAGCTGTAGAAAGCCTCGCCCCTCCCATCAGATGTGTGCTCTGGACTCATTTGAGTTTGGTTaGAAAGAGATGCAGTTGACA +
Preference number: 2 (lower is better)
Translates to: RSSSCRKPRPSHQMCALDSFEFG*KEMQLT
Trigger: TGTCAACTGCATCTCTTTTCAACCAAACTCAAATGA...GTCCAGAGCACACATCTGATGGGAGGGGCGAGGCTTTCTACAGCTGCTTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR GCA 90 bp TCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGGTGGGAAAATTCTATCTaGTCTTTCCGCTCCTTAAAC +
Preference number: 2 (lower is better)
Translates to: SVRSIGWSCRLEQSGTIGWENSI*SFRSLN
Trigger: GTTTAAGGAGCGGAAAGAGCAGATAGAATTTTCCCA...CCCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR CCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCACTGGATCCGAAATCTaGAGAGGTGTCGACGCTGTA +
Preference number: 2 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPTGSEI*RGVDAV
Trigger: TACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR-3UTR CCA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCACTGGATCCGAAATCTaGAGAGGTGTCGACGCTGTA +
Preference number: 2 (lower is better)
Translates to: WTFETLHLILPKTPSPVLTGSEI*RGVDAV
Trigger: TACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
3UTR-3UTR CCA 90 bp CAGAAACCGTCTAGTGCTGGCAGTCTTATCTTGATTCCACACGGAGAAAGAAACGAGGGAAAGACCCACTaGGAGAAGATGGGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: QKPSSAGSLILIPHGERNEGKTH*EKMGPC
Trigger: ACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTC...GTTTCTTTCTCCGTGTGGAATCAAGATAAGACTGCCAGCACTAGACGGTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR GCA 90 bp GTATGGGAAAATTCTATCTGCTCTTTCCGCTCCTTAAACAAAGTCCTAGGATACGGGAGGGCCGTCCTTTaGCCTTTGGGTGCAACGTTT +
Preference number: 2 (lower is better)
Translates to: VWENSICSFRSLNKVLGYGRAVL*PLGATF
Trigger: AAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCC...GTATCCTAGGACTTTGTTTAAGGAGCGGAAAGAGCAGATAGAATTTTCCCATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
3UTR TCA 72 bp CTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTaGCCGGGCGCGGTCTCTGGCTGGGGCGTCAGGCTC +
Preference number: 3 (lower is better)
Translates to: LWVQRFRVDPAP*PGAVSGWGVRL
Trigger: GAGCCTGACGCCCCAGCCAGAGACCGCGCCCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR GCA 72 bp CTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTaGTCCCTGACCGGGCGCGGTCTCTGGCTGGGGCGT +
Preference number: 3 (lower is better)
Translates to: LCPLGATFPGGP*SLTGRGLWLGR
Trigger: ACGCCCCAGCCAGAGACCGCGCCCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR CCA 72 bp GGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTaGACCCTGCTCCCTGACCGGGCGCGGTCTCTGGCT +
Preference number: 3 (lower is better)
Translates to: GRPLPFGCNVSG*TLLPDRARSLA
Trigger: AGCCAGAGACCGCGCCCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR GCA 72 bp GATGGGTCCTTGTGCCCAGGAGGGAGGGCCGTCCTTTaGCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGC +
Preference number: 3 (lower is better)
Translates to: DGSLCPGGRAVL*PLGATFPGGPC
Trigger: GCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGGCACAAGGACCCATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR TCA 72 bp CCATACCAACGGGGTGGCCCAGTCCTTCCGCCTCTGTaGACGGCACGTTCCACCGGAAGCCAAGGCCATGGT +
Preference number: 3 (lower is better)
Translates to: PYQRGGPVLPPL*TARSTGSQGHG
Trigger: ACCATGGCCTTGGCTTCCGGTGGAACGTGCCGTTCACAGAGGCGGAAGGACTGGGCCACCCCGTTGGTATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR CCA 72 bp AGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTaGGGTTTGTTGTCAGCTGGCCTTCGGGTGCCCTTC +
Preference number: 3 (lower is better)
Translates to: RMELQVGAEWHH*GLLSAGLRVPF
Trigger: GAAGGGCACCCGAAGGCCAGCTGACAACAAACCCCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR CAA 90 bp TCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGGAGGGAGGGCCGTCCTTaGCCCTTTGGGTGCAACGTT +
Preference number: 3 (lower is better)
Translates to: SVRSIGWSCRLEQSGTIGREGRP*PFGCNV
Trigger: AACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCT...CCCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR GCA 72 bp GGCACCATTGGGGTTTGTTGTCAGCTGGCCTTCGGGTaGCCTTCCCACCAAATCCACGTTTCTCCACGAGGA +
Preference number: 3 (lower is better)
Translates to: GTIGVCCQLAFG*PSHQIHVSPRG
Trigger: TCCTCGTGGAGAAACGTGGATTTGGTGGGAAGGGCACCCGAAGGCCAGCTGACAACAAACCCCAATGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR CCA 72 bp GATGCAGTTGACAAAGTATGCACCATACCAACGGGGTaGCCCAGTCCTTCCGCCTCTGTGAACGGCACGTTC +
Preference number: 3 (lower is better)
Translates to: DAVDKVCTIPTG*PSPSASVNGTF
Trigger: GAACGTGCCGTTCACAGAGGCGGAAGGACTGGGCCACCCCGTTGGTATGGTGCATACTTTGTCAACTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR CAA 90 bp GTTCCACCGGAAGCCAAGGCCATGGTATGGGAAAATTCTATCTGCTCTTTCCGCGCCGTCCTTTGCCCTTaGGGTGCAACGTTTCCGGGT +
Preference number: 3 (lower is better)
Translates to: VPPEAKAMVWENSICSFRAVLCP*GATFPG
Trigger: ACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGC...GCGGAAAGAGCAGATAGAATTTTCCCATACCATGGCCTTGGCTTCCGGTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR CCA 72 bp ACAGTAGGAACCACGTTGTCTGTGAGAAGCATAGGATaGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGG +
Preference number: 3 (lower is better)
Translates to: TVGTTLSVRSIG*SCRLEQSGTIG
Trigger: CCCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGACAACGTGGTTCCTACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR CAA 90 bp GTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGCCCCACCCTATACTCTaGTTATTTTGGCGAGAGGGA +
Preference number: 3 (lower is better)
Translates to: VCEKHRMELQVGAEWHHWPHPIL*LFWREG
Trigger: TCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGG...CCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR GCA 72 bp CACGCACACGCGCGCACACATACACACACATACACTTaGACCCAGGTCTCACGTCTAAGTAGCAAGAAACCA +
Preference number: 3 (lower is better)
Translates to: HAHARTHTHTYT*TQVSRLSSKKP
Trigger: TGGTTTCTTGCTACTTAGACGTGAGACCTGGGTGCAAGTGTATGTGTGTGTATGTGTGCGCGCGTGTGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR CCA 72 bp TCTGTGAACGGCACGTTCCACCGGAAGCCAAGGCCATaGTATGGGAAAATTCTATCTGCTCTTTCCGCTCCT +
Preference number: 3 (lower is better)
Translates to: SVNGTFHRKPRP*YGKILSALSAP
Trigger: AGGAGCGGAAAGAGCAGATAGAATTTTCCCATACCATGGCCTTGGCTTCCGGTGGAACGTGCCGTTCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR CAA 90 bp GACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGATGAGTAGGGAGGGCCGTCCTTaGCCCTTTGGGTGCAACGTT +
Preference number: 3 (lower is better)
Translates to: DRLTLDIPGVSRSEYRMSREGRP*PFGCNV
Trigger: AACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCT...ACTCATCCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
3UTR-3UTR CAA 90 bp GTATGGGAAAATTCTATCTGCTCTTTCCGCTCCTTAAACAAAGTCCTAGGATACGGAGAAGATGGGTCCTaGTGCCCAGGAGGGAGGGCC +
Preference number: 3 (lower is better)
Translates to: VWENSICSFRSLNKVLGYGEDGS*CPGGRA
Trigger: GGCCCTCCCTCCTGGGCACAAGGACCCATCTTCTCC...GTATCCTAGGACTTTGTTTAAGGAGCGGAAAGAGCAGATAGAATTTTCCCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
3UTR CCA 72 bp GAACGGCACGTTCCACCGGAAGCCAAGGCCATGGTATaGGAAAATTCTATCTGCTCTTTCCGCTCCTTAAAC +
Preference number: 3 (lower is better)
Translates to: ERHVPPEAKAMV*ENSICSFRSLN
Trigger: GTTTAAGGAGCGGAAAGAGCAGATAGAATTTTCCCATACCATGGCCTTGGCTTCCGGTGGAACGTGCCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR CAA 90 bp AGAAAAGACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGGCCGTCCTTTGCCCTTaGGGTGCAACGTTTCCGGGT +
Preference number: 3 (lower is better)
Translates to: RKDRLTLDIPGVSRSEYRAVLCP*GATFPG
Trigger: ACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGC...CCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
3UTR-3UTR CAA 90 bp CACGTTGTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACTATACTCTTGTTATTTaGGCGAGAGGGAAAGACCCA +
Preference number: 3 (lower is better)
Translates to: HVVCEKHRMELQVGAEWHYTLVI*ARGKDP
Trigger: TGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATA...GTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGACAACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR GCA 72 bp CCGGAAGCCAAGGCCATGGTATGGGAAAATTCTATCTaGTCTTTCCGCTCCTTAAACAAAGTCCTAGGATAC +
Preference number: 3 (lower is better)
Translates to: PEAKAMVWENSI*SFRSLNKVLGY
Trigger: GTATCCTAGGACTTTGTTTAAGGAGCGGAAAGAGCAGATAGAATTTTCCCATACCATGGCCTTGGCTTCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR-3UTR CAA 90 bp AGAAAAGACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGCCCCACCCTATACTCTaGTTATTTTGGCGAGAGGGA +
Preference number: 3 (lower is better)
Translates to: RKDRLTLDIPGVSRSEYRPHPIL*LFWREG
Trigger: TCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGG...CCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
3UTR TCA 72 bp CTTTTTGGCATCTCAAAGTTTACTGCAATGGACTTTTaGGACTCTCCATCTGATTCTTCCCAAGACTCCTTC +
Preference number: 3 (lower is better)
Translates to: LFGISKFTAMDF*DSPSDSSQDSF
Trigger: GAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGATGCCAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
3UTR TCA 72 bp AGAATTTGTTTTCCATCAGCCAATGAGAACTCTGCGTaGAACTCCCAATTAGTGAAGCCAAGCAAAGGTCAA +
Preference number: 3 (lower is better)
Translates to: RICFPSANENSA*NSQLVKPSKGQ
Trigger: TTGACCTTTGCTTGGCTTCACTAATTGGGAGTTTCACGCAGAGTTCTCATTGGCTGATGGAAAACAAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR TCA 72 bp TTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGATaGGTTAATTGCTTTTTGGCATCTCAAAGTTTACTG +
Preference number: 3 (lower is better)
Translates to: LTFQAFQGLSIG*VNCFLASQSLL
Trigger: CAGTAAACTTTGAGATGCCAAAAAGCAATTAACTCATCCTATACTCAGACCTTGAAACGCCTGGAATGTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
3UTR TCA 72 bp AGACTCCACCTCTCTCCCAGGAACCTAGCAAATTCTTaGATACTTAAGGTCTTTCTGTTGAATAAATACACA +
Preference number: 3 (lower is better)
Translates to: RLHLSPRNLANS*ILKVFLLNKYT
Trigger: TGTGTATTTATTCAACAGAAAGACCTTAAGTATTCAAGAATTTGCTAGGTTCCTGGGAGAGAGGTGGAGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR CCA 72 bp GTTAATTGCTTTTTGGCATCTCAAAGTTTACTGCAATaGACTTTTGAGACTCTCCATCTGATTCTTCCCAAG +
Preference number: 3 (lower is better)
Translates to: VNCFLASQSLLQ*TFETLHLILPK
Trigger: CTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGATGCCAAAAAGCAATTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR TCA 90 bp TGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCGTGGACCCTGCTCCCTaGCCGGGCGCGGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: CRRCTSSGWRLTAAPAPPVDPAP*PGAVSG
Trigger: GCCAGAGACCGCGCCCGGTCAGGGAGCAGGGTCCAC...GGGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCAGACGCGGATGTGCGTaGAGCCGCGGGCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPARRGCA*SRGPPG
Trigger: CCCTGGTGGCCCGCGGCTGCACGCACATCCGCGTCT...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCGGCCGGCCGCGGGGCTaGTGTTGGCCGTTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: CRRCTSSGWRLTAAPAPPGRPRG*CWPFFL
Trigger: GAGGAAAAACGGCCAACAGCAGCCCCGCGGCCGGCC...GGGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCAGGCTGGTGCCGTGCTaGCAGATCTGGGCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: CRRCTSSGWRLTAAPAPPRLVPC*QIWAEP
Trigger: CGGCTCGGCCCAGATCTGGCAGCACGGCACCAGCCT...GGGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCCTCTGCGCGTCCTGTaGCCTCCGGGACTACTCGGG +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPAPLRVL*PPGLLG
Trigger: CCCGAGTAGTCCCGGAGGCCACAGGACGCGCAGAGG...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp GAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCAGGCCCGAACGACTaGGGCTGCGGGAAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: ERCRRCTSSGWRLTAAPAPGPND*GCGKAG
Trigger: ACCCGCCTTCCCGCAGCCGCAGTCGTTCGGGCCTGG...GGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438375.2
CDS-3UTR GCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCGCCGCTCCCCTCTGCTaGACTCCATGGGGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPAAAPLC*TPWGRP
Trigger: TGGACGACCCCATGGAGTGCAGCAGAGGGGAGCGGC...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCTCCTGCGCCAGTCTCTaGGCGAGCTGGTCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: EVSTLYKFRLAADSSARPSCASL*ASWSGS
Trigger: GGAGCCCGACCAGCTCGCGCAGAGACTGGCGCAGGA...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCGGGCAGACGCGGATGTaGGTGCAGCCGCGGGCCACC +
Preference number: 4 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTGQTRM*VQPRAT
Trigger: GGTGGCCCGCGGCTGCACGCACATCCGCGTCTGCCC...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCTCTCAGGAGCGCGGTTaGTGCGGTTCTTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPASQERG*CGSWPG
Trigger: CCCTGGCCAAGAACCGCATCAACCGCGCTCCTGAGA...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCGGTGGCTGTCCATGCTaGGGCCCTCTGCCACGTGCC +
Preference number: 4 (lower is better)
Translates to: ERCRRCTSSGWRLTAAPAGGCPC*GPLPRA
Trigger: GGCACGTGGCAGAGGGCCTCAGCATGGACAGCCACC...GGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCCCACCAGACGCCACTaGCACAGCGGGTGGATAAGG +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPAPTRRH*HSGWIR
Trigger: CCTTATCCACCCGCTGTGTCAGTGGCGTCTGGTGGG...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCAGACGCGGATGTGCGTaGAGCCGCGGGCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTRRGCA*SRGPPG
Trigger: CCCTGGTGGCCCGCGGCTGCACGCACATCCGCGTCT...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGGGCAGACGCGGATGTaGGTGCAGCCGCGGGCCACC +
Preference number: 4 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPGQTRM*VQPRAT
Trigger: GGTGGCCCGCGGCTGCACGCACATCCGCGTCTGCCC...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp GAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCTTTCCGGGTGGACCCTaGTCCCTGACCGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: ERCRRCTSSGWRLTAAPAFPGGP*SLTGRG
Trigger: ACCGCGCCCGGTCAGGGAGCAGGGTCCACCCGGAAA...GGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCAGCTGGAGGCTGGGCTaGACGATGGTCCGAGGACAG +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPASWRLG*TMVRGQ
Trigger: CTGTCCTCGGACCATCGTCCAGCCCAGCCTCCAGCT...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCCCGGCCCTGGGCACATaGGTGTGGGCTGTACCACTC +
Preference number: 4 (lower is better)
Translates to: EVSTLYKFRLAADSSARPPALGT*VWAVPL
Trigger: GAGTGGTACAGCCCACACCCATGTGCCCAGGGCCGG...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCTGTACAAGTTCCGGCTaGCGGCTGACAGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: CRRCTSSGWRLTAAPAPPCTSSG*RLTAAP
Trigger: GGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACA...GGGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCCCGCGGGGCTGCTGTTaGCCGTTTTTCCTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: CRRCTSSGWRLTAAPAPPPRGCC*PFFLFR
Trigger: GCGGAAGAGGAAAAACGGCCAACAGCAGCCCCGCGG...GGGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCGGTGGCTGTCCATGCTaGGGCCCTCTGCCACGTGCC +
Preference number: 4 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPGGCPC*GPLPRA
Trigger: GGCACGTGGCAGAGGGCCTCAGCATGGACAGCCACC...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCACAGCTTCCCGTTGCTaGGCGTCGCCGTGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: SGEVSTLYKFRLAADSSATASRC*ASPCPA
Trigger: CGCGGGGCACGGCGACGCTCAGCAACGGGAAGCTGT...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCAGGCTGGTGCCGTGCTaGCAGATCTGGGCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTRLVPC*QIWAEP
Trigger: CGGCTCGGCCCAGATCTGGCAGCACGGCACCAGCCT...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGACCGGGCGCGGTCTCTaGCTGGGGCGTCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRTGRGL*LGRQAP
Trigger: AGGAGCCTGACGCCCCAGCCAGAGACCGCGCCCGGT...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCTGCAACGTTTCCGGGTaGACCCTGCTCCCTGACCGG +
Preference number: 4 (lower is better)
Translates to: EVSTLYKFRLAADSSARPCNVSG*TLLPDR
Trigger: CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCA...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCCCGCGGGGCTGCTGTTaGCCGTTTTTCCTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: EVSTLYKFRLAADSSARPPRGCC*PFFLFR
Trigger: GCGGAAGAGGAAAAACGGCCAACAGCAGCCCCGCGG...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCGCGGGGCATCTTCTATaGATCCTCATGGAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPAAGHLL*ILMEPP
Trigger: AGGGGGCTCCATGAGGATTCATAGAAGATGCCCCGC...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp TGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCCCTCTGGGGCCACTTTaGAGTGAGGGACCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: CRRCTSSGWRLTAAPAPPPLGPL*SEGPPS
Trigger: AGAAGGAGGTCCCTCACTTCAAAGTGGCCCCAGAGG...GGGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCCTGCTTTGGCACAGATaGGGCAGGCGGTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: EVSTLYKFRLAADSSARPLLWHR*GRRWCS
Trigger: ACTGCACCACCGCCTGCCTCATCTGTGCCAAAGCAG...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCGATAGGCTAGAAGCATaGAGAGCCAGACGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPADRLEA*RARRPE
Trigger: CTCCGGGCGTCTGGCTCTTCATGCTTCTAGCCTATC...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCCGTGCCCTTTAGGGTaGATTAGTATTCCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPAPCPLG*ISIPAA
Trigger: CGCGGCGGGAATACTAATGCACCCTAAAGGGCACGG...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438375.2
CDS-3UTR GCA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCAGGCCCTCTGCCACGTaGCACTGGCCGATCTGCCGA +
Preference number: 4 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPRPSAT*HWPICR
Trigger: TCGGCAGATCGGCCAGTGGCACGTGGCAGAGGGCCT...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCCCGAGCCGACTGGCATaGCAATCCCATAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: EVSTLYKFRLAADSSARPPSRLA*QSHSPW
Trigger: CCAAGGGCTATGGGATTGGCATGCCAGTCGGCTCGG...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTCTGGTCGGGCTCCCCTaGCCCGCACAGCTTCCCGTT +
Preference number: 4 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPLVGLP*PAQLPV
Trigger: AACGGGAAGCTGTGCGGGGCAGGGGAGCCCGACCAG...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCATGGAGCCCCCTGCTaGCCTGGGCATGACATAACT +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPAHGAPC*PGHDIT
Trigger: AGTTATGTCATGCCCAGGCCAGCAGGGGGCTCCATG...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCGGCTGGGCTGGACGATaGTCCGAGGACAGCGACCAC +
Preference number: 4 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTGWAGR*SEDSDH
Trigger: GTGGTCGCTGTCCTCGGACCATCGTCCAGCCCAGCC...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCGGCTGGGCTGGACGATaGTCCGAGGACAGCGACCAC +
Preference number: 4 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPGWAGR*SEDSDH
Trigger: GTGGTCGCTGTCCTCGGACCATCGTCCAGCCCAGCC...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCCGTGCTGCCAGATCTaGGCCGAGCCGCAGGACAAG +
Preference number: 4 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTPCCQI*AEPQDK
Trigger: CTTGTCCTGCGGCTCGGCCCAGATCTGGCAGCACGG...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCCCGTCCAGGTGCCGTTaGCCTCGGGAACGCCGTACA +
Preference number: 4 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPPSRCR*PRERRT
Trigger: TGTACGGCGTTCCCGAGGCCAACGGCACCTGGACGG...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCCCGGCCCTGGGCACATaGGTGTGGGCTGTACCACTC +
Preference number: 4 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPPALGT*VWAVPL
Trigger: GAGTGGTACAGCCCACACCCATGTGCCCAGGGCCGG...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCGCTCGCTGCTGTTGGTaGTTTTCTCCCACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPAARCCW*FSPTPG
Trigger: GCCTGGAGTGGGAGAAAACCACCAACAGCAGCGAGC...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCAGGCGGTGGTGCAGTTaGAGAAGTTCAGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPARRWCS*RSSGSQ
Trigger: CTGGGATCCTGAACTTCTTCAACTGCACCACCGCCT...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCTGCTTTGGCACAGATaGGGCAGGCGGTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: ERCRRCTSSGWRLTAAPALLWHR*GRRWCS
Trigger: ACTGCACCACCGCCTGCCTCATCTGTGCCAAAGCAG...GGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCGACCAGGGTGGTGTTaGAGAGAGTGTCCGAGATGT +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPARPGWC*RECPRC
Trigger: ACATCTCGGACACTCTCTTCAACACCACCCTGGTCG...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp TGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCCGACCAGGGTGGTGTTaGAGAGAGTGTCCGAGATGT +
Preference number: 4 (lower is better)
Translates to: CRRCTSSGWRLTAAPAPPRPGWC*RECPRC
Trigger: ACATCTCGGACACTCTCTTCAACACCACCCTGGTCG...GGGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCTCTCTGCCAGCTCCTTaGGCATGTCCACACAGAAGC +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPASLPAP*ACPHRS
Trigger: GCTTCTGTGTGGACATGCTCAAGGAGCTGGCAGAGA...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCCCACCAGACGCCACTaGCACAGCGGGTGGATAAGG +
Preference number: 4 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTPTRRH*HSGWIR
Trigger: CCTTATCCACCCGCTGTGTCAGTGGCGTCTGGTGGG...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCGCGATCCTCAAGGAGTaGGGGCTGCAGGCGACCATC +
Preference number: 4 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTAILKE*GLQATI
Trigger: GATGGTCGCCTGCAGCCCGCACTCCTTGAGGATCGC...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCGAAGATGGGTCCTTGTaGCCAGGAGGGAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPEDGSL*PGGRAV
Trigger: GACGGCCCTCCCTCCTGGGCACAAGGACCCATCTTC...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCTTCTATGAATCCTCATaGAGCCCCCTGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPAFYESS*SPLLAW
Trigger: CCAGGCCAGCAGGGGGCTCCATGAGGATTCATAGAA...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCTGTCCACTTCGACCTTaGCCTTGCCCAGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: EVSTLYKFRLAADSSARPCPLRP*PCPASQ
Trigger: CTGAGAGGCTGGGCAAGGCCAAGGTCGAAGTGGACA...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGGCTGGGCTGGACGATaGTCCGAGGACAGCGACCAC +
Preference number: 4 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPGWAGR*SEDSDH
Trigger: GTGGTCGCTGTCCTCGGACCATCGTCCAGCCCAGCC...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCTTCTCCTGCCAGGACTaGTTGAGGCTCTGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPAFSCQD*LRLWAN
Trigger: GTTTGCCCAGAGCCTCAACCAGTCCTGGCAGGAGAA...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCCAATCCCATAGCCCTTaGTGTCCAGCAGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: EVSTLYKFRLAADSSARPQSHSP*CPAGPQ
Trigger: TTGGGGGCCTGCTGGACACCAAGGGCTATGGGATTG...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCACCGGGCGCGGTCTCTaGCTGGGGCGTCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSTGRGL*LGRQAP
Trigger: AGGAGCCTGACGCCCCAGCCAGAGACCGCGCCCGGT...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCAGACGGAGGGTACATTaGCCCCTGACTAGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPARRRVH*PLTRGK
Trigger: TTTCCCCCTAGTCAGGGGCCAATGTACCCTCCGTCT...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCCACTCAGAAAGTATCTaGTCGGCTCCGCACTCCGGG +
Preference number: 4 (lower is better)
Translates to: EVSTLYKFRLAADSSARPHSESI*SAPHSG
Trigger: CCCGGAGTGCGGAGCCGACCAGATACTTTCTGAGTG...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638419.1
CDS-3UTR TCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCGGCGGATCTTGTAGTTaGATCGGAGGATCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPAGGSCS*IGGSLP
Trigger: TGGCAGAGATCCTCCGATTCAACTACAAGATCCGCC...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp ACGCACACGCGCGCACACATACACACACATACACTTGCACCCAGGTCTCACGTCGTGGACCCTGCTCCCTaGCCGGGCGCGGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: THTRAHIHTHTLAPRSHVVDPAP*PGAVSG
Trigger: GCCAGAGACCGCGCCCGGTCAGGGAGCAGGGTCCAC...GACGTGAGACCTGGGTGCAAGTGTATGTGTGTGTATGTGTGCGCGCGTGTGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCGTCCTTCCGCCTCTGTaGACGGCACGTTCCACCGGA +
Preference number: 4 (lower is better)
Translates to: SGEVSTLYKFRLAADSSAVLPPL*TARSTG
Trigger: TCCGGTGGAACGTGCCGTTCACAGAGGCGGAAGGAC...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCGACCCTTCCCAGCCCTaGGCTCCGACCCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSDPSQP*APTPLL
Trigger: GAGGAGTGGGGTCGGAGCGCAGGGCTGGGAAGGGTC...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438375.2
CDS-3UTR GCA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGGCGATCCTCAAGGAGTaGGGGCTGCAGGCGACCATC +
Preference number: 4 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRAILKE*GLQATI
Trigger: GATGGTCGCCTGCAGCCCGCACTCCTTGAGGATCGC...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCAGAGCCGCTCCCCTCTaGTGCACTCCATGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: SGEVSTLYKFRLAADSSARAAPL*CTPWGR
Trigger: ACGACCCCATGGAGTGCAGCAGAGGGGAGCGGCTCT...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTCTTCGACCTTGGCCTTaGCCAGCCTCTCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPLRPWP*PASQER
Trigger: GCGCTCCTGAGAGGCTGGGCAAGGCCAAGGTCGAAG...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCGGGTGTCATCCAGCATaGGGACGGACAGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPGCHPA*GRTACP
Trigger: AGGACACGCTGTCCGTCCGCATGCTGGATGACACCC...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp GAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCTCCGGTTCAGTTCCTaGACCGCAGTCACCACAGCA +
Preference number: 4 (lower is better)
Translates to: ERCRRCTSSGWRLTAAPALRFSS*TAVTTA
Trigger: TGCTGTGGTGACTGCGGTGCAGGAACTGAACCGGAG...GGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGGTTCACCAGGAGGTTaGACCGGCCCTGGGCACATG +
Preference number: 4 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPGSPGG*TGPGHM
Trigger: CATGTGCCCAGGGCCGGTGCAACCTCCTGGTGAACC...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp GAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCAATGGGCACATCCATaGGCTGCACGGTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ERCRRCTSSGWRLTAAPAQWAHP*AARSGR
Trigger: CCTTCCTGACCGTGCAGCGCATGGATGTGCCCATTG...GGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TTGGCCCCCAGGACGGCAGCCCTAACTGATTGTCCTGGCATAAAGAGGATGCCGAGACGCGGATGTGCGTaGAGCCGCGGGCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: LAPRTAALTDCPGIKRMPRRGCA*SRGPPG
Trigger: CCCTGGTGGCCCGCGGCTGCACGCACATCCGCGTCT...CGGCATCCTCTTTATGCCAGGACAATCAGTTAGGGCTGCCGTCCTGGGGGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp AGGTCAAGCAGCTGTAGAAAGCCTCGCCCCTCCCATCAGATGTGTGCTCTGGACGGGCAGACGCGGATGTaGGTGCAGCCGCGGGCCACC +
Preference number: 4 (lower is better)
Translates to: RSSSCRKPRPSHQMCALDGQTRM*VQPRAT
Trigger: GGTGGCCCGCGGCTGCACGCACATCCGCGTCTGCCC...GTCCAGAGCACACATCTGATGGGAGGGGCGAGGCTTTCTACAGCTGCTTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCTTTCCGGGTGGACCCTaGTCCCTGACCGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSFPGGP*SLTGRG
Trigger: ACCGCGCCCGGTCAGGGAGCAGGGTCCACCCGGAAA...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCGAAGATGGGTCCTTGTaGCCAGGAGGGAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: SGEVSTLYKFRLAADSSAEDGSL*PGGRAV
Trigger: GACGGCCCTCCCTCCTGGGCACAAGGACCCATCTTC...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGGGATGGGGTCCTCTCTaGGAGGCACCCGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRGWGPL*EAPVSF
Trigger: GAAGGAGACGGGTGCCTCCCAGAGAGGACCCCATCC...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438375.2
CDS-3UTR CCA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGGATGGAGCTGGAGGCTaGGCTGGACGATGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRDGAGG*AGRWSE
Trigger: CTCGGACCATCGTCCAGCCCAGCCTCCAGCTCCATC...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCTTCTCCTGCCAGGACTaGTTGAGGCTCTGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: EVSTLYKFRLAADSSARPFSCQD*LRLWAN
Trigger: GTTTGCCCAGAGCCTCAACCAGTCCTGGCAGGAGAA...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCCCAGTGAAGGGCACATaGTCACAGTTCTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: EVSTLYKFRLAADSSARPPVKGT*SQFSCQ
Trigger: CTGGCAGGAGAACTGTGACCATGTGCCCTTCACTGG...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCTGGAATTCAACACCCTaGCGATTCCCTCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: CRRCTSSGWRLTAAPAPPWNSTP*RFPPLC
Trigger: GCACAGAGGAGGGAATCGCCAGGGTGTTGAATTCCA...GGGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGAAAACCGAGCCGACTaGCATGCCAATCCCATAGCC +
Preference number: 4 (lower is better)
Translates to: EVSTLYKFRLAADSSARPENRAD*HANPIA
Trigger: GGCTATGGGATTGGCATGCCAGTCGGCTCGGTTTTC...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCCCTCTGCGCGTCCTGTaGCCTCCGGGACTACTCGGG +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSPLRVL*PPGLLG
Trigger: CCCGAGTAGTCCCGGAGGCCACAGGACGCGCAGAGG...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCTGCAACGTTTCCGGGTaGACCCTGCTCCCTGACCGG +
Preference number: 4 (lower is better)
Translates to: SGEVSTLYKFRLAADSSACNVSG*TLLPDR
Trigger: CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCA...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTTGCAACGTTTCCGGGTaGACCCTGCTCCCTGACCGG +
Preference number: 4 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPCNVSG*TLLPDR
Trigger: CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCA...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
3UTR CAA 72 bp AGATGGGTCCTTGTGCCCAGGAGGGAGGGCCGTCCTTaGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: RWVLVPRREGRP*PFGCNVSGWTL
Trigger: CAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGGCACAAGGACCCATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCGGGGCCACTTTGAAGTaGGGGACCTCCTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTGATLK*GTSFSP
Trigger: TGGAGAGAAGGAGGTCCCTCACTTCAAAGTGGCCCC...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCGATAGGCTAGAAGCATaGAGAGCCAGACGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPDRLEA*RARRPE
Trigger: CTCCGGGCGTCTGGCTCTTCATGCTTCTAGCCTATC...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCTTCCCGCCCCAAATGTaGTCTGACAGTAGGAACCAC +
Preference number: 4 (lower is better)
Translates to: EVSTLYKFRLAADSSARPFPPQM*SDSRNH
Trigger: GTGGTTCCTACTGTCAGATCACATTTGGGGCGGGAA...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCCTCATGGAGCCCCCTaGTGGCCTGGGCATGACATA +
Preference number: 4 (lower is better)
Translates to: SGEVSTLYKFRLAADSSAPHGAP*WPGHDI
Trigger: TATGTCATGCCCAGGCCAGCAGGGGGCTCCATGAGG...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCGCCGCTCCCCTCTGCTaGACTCCATGGGGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSAAPLC*TPWGRP
Trigger: TGGACGACCCCATGGAGTGCAGCAGAGGGGAGCGGC...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCTGACACATGGTTTCTaGAGTCTCGTACTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPALTHGF*SLVLAV
Trigger: GACAGCGAGTACGAGACTGCAGAAACCATGTGTCAG...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGGCCCTCTGCCACGTaGCACTGGCCGATCTGCCGA +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSRPSAT*HWPICR
Trigger: TCGGCAGATCGGCCAGTGGCACGTGGCAGAGGGCCT...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCAATGGGCACATCCATaGGCTGCACGGTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTQWAHP*AARSGR
Trigger: CCTTCCTGACCGTGCAGCGCATGGATGTGCCCATTG...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCCTTCAGGAGGATaGTGTGGGACATGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTLPSGG*CGTWRR
Trigger: ACGCCTCCATGTCCCACACCATCCTCCTGAAGGCAG...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCCCGTGCTGCCAGATCTaGGCCGAGCCGCAGGACAAG +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSPCCQI*AEPQDK
Trigger: CTTGTCCTGCGGCTCGGCCCAGATCTGGCAGCACGG...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCTATTCAATGGCGGTCTaGTCAGCCAGGTCATCCACT +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPAYSMAV*SARSST
Trigger: AGTGGATGACCTGGCTGACCAGACCGCCATTGAATA...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCGGCGCGGTCTCTGGCTaGGGCGTCAGGCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSGAVSG*GVRLLD
Trigger: ATCAAGGAGCCTGACGCCCCAGCCAGAGACCGCGCC...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGGGTTTGTTGTCAGCTaGCCTTCGGGTGCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPGFVVS*PSGALP
Trigger: GGGAAGGGCACCCGAAGGCCAGCTGACAACAAACCC...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCCTCTGGGGCCACTTTaGAGTGAGGGACCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SGEVSTLYKFRLAADSSAPLGPL*SEGPPS
Trigger: AGAAGGAGGTCCCTCACTTCAAAGTGGCCCCAGAGG...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTCTGGAACTGGAACTTaGCGAACTCCTCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPSGTGT*RTPLGP
Trigger: TGGCCCCAGAGGAGTTCGTCAAGTTCCAGTTCCAGA...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCAGGCGGTGGTGCAGTTaGAGAAGTTCAGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTRRWCS*RSSGSQ
Trigger: CTGGGATCCTGAACTTCTTCAACTGCACCACCGCCT...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCAAAATCCCAGGATGTTaGCACGATCATCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPAKIPGC*HDHPQG
Trigger: GCCTTGTGGATGATCGTGTCAACATCCTGGGATTTT...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCCGACCAGGGTGGTGTTaGAGAGAGTGTCCGAGATGT +
Preference number: 4 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPRPGWC*RECPRC
Trigger: ACATCTCGGACACTCTCTTCAACACCACCCTGGTCG...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCTCTCTGCCAGCTCCTTaGGCATGTCCACACAGAAGC +
Preference number: 4 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTSLPAP*ACPHRS
Trigger: GCTTCTGTGTGGACATGCTCAAGGAGCTGGCAGAGA...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCAGCCAGGTCATCCACTaGCTCAATGGGCACATCCAT +
Preference number: 4 (lower is better)
Translates to: ERCRRCTSSGWRLTAAPASQVIH*LNGHIH
Trigger: ATGGATGTGCCCATTGAGTCAGTGGATGACCTGGCT...GGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCGGGTGGATACTGTCCTaGCACAGGATAATGCTGCGC +
Preference number: 4 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTGWILS*HRIMLR
Trigger: GCGCAGCATTATCCTGTGTCAGGACAGTATCCACCC...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCGGGTACATTGGCCCCTaGCTAGGGGGAAATTCAACT +
Preference number: 4 (lower is better)
Translates to: ERCRRCTSSGWRLTAAPAGYIGP*LGGNST
Trigger: AGTTGAATTTCCCCCTAGTCAGGGGCCAATGTACCC...GGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTCCCAGGCCCGTGTATTaGCTAGGAGACTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPPRPVY*LGDSTS
Trigger: AGAGGTGGAGTCTCCTAGTCAATACACGGGCCTGGG...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCGCCGCTCCCCTCTGCTaGACTCCATGGGGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGAAPLC*TPWGRP
Trigger: TGGACGACCCCATGGAGTGCAGCAGAGGGGAGCGGC...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGAGCCGCTCCCCTCTaGTGCACTCCATGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSRAAPL*CTPWGR
Trigger: ACGACCCCATGGAGTGCAGCAGAGGGGAGCGGCTCT...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCCTTCGACCTTGGCCTTaGCCAGCCTCTCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSLRPWP*PASQER
Trigger: GCGCTCCTGAGAGGCTGGGCAAGGCCAAGGTCGAAG...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTCTCCGGTTCAGTTCCTaGACCGCAGTCACCACAGCA +
Preference number: 4 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPLRFSS*TAVTTA
Trigger: TGCTGTGGTGACTGCGGTGCAGGAACTGAACCGGAG...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp GAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCGAATCGGAGGATCTCTaGCAGCTCCTTGAGCATGTC +
Preference number: 4 (lower is better)
Translates to: ERCRRCTSSGWRLTAAPAESEDL*QLLEHV
Trigger: GACATGCTCAAGGAGCTGGCAGAGATCCTCCGATTC...GGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCGGTTCACCAGGAGGTTaGACCGGCCCTGGGCACATG +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSGSPGG*TGPGHM
Trigger: CATGTGCCCAGGGCCGGTGCAACCTCCTGGTGAACC...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCAGCCTCCGTGAATTGTaGCATATTCAATGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: CRRCTSSGWRLTAAPAPPSLREL*HIQWRS
Trigger: AGACCGCCATTGAATATGGCACAATTCACGGAGGCT...GGGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGCCTTTGCCCTTTGGGTaGAACGTTTCCGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRPLPFG*NVSGWT
Trigger: GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGG...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCCTCCCATCAGATGTGTaGTCTGGACTCTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: CRRCTSSGWRLTAAPAPPLPSDV*SGLCKL
Trigger: AAGTTTGCAGAGTCCAGAGCACACATCTGATGGGAG...GGGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTCACCCGTCTCCTTCCTaGGTCCTAAGACCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPHPSPS*VLRPFP
Trigger: TGGGAAGGGTCTTAGGACCCAGGAAGGAGACGGGTG...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438375.2
CDS-3UTR CCA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCTGTCCACTTCGACCTTaGCCTTGCCCAGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SGEVSTLYKFRLAADSSACPLRP*PCPASQ
Trigger: CTGAGAGGCTGGGCAAGGCCAAGGTCGAAGTGGACA...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCTTGACGAACTCCTCTaGGGCCACTTTGAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: ERCRRCTSSGWRLTAAPALDELL*GHFEVR
Trigger: CCTCACTTCAAAGTGGCCCCAGAGGAGTTCGTCAAG...GGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTCTGCCTTCAGGAGGATaGTGTGGGACATGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPLPSGG*CGTWRR
Trigger: ACGCCTCCATGTCCCACACCATCCTCCTGAAGGCAG...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCCTTCCATCTCCTGGTaGTTCCCCTTCAGCATTAAA +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPAPSISW*FPFSIK
Trigger: TTTAATGCTGAAGGGGAACCACCAGGAGATGGAAGG...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCTTGTGCCATATTCAATaGCGGTCTGGTCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: EVSTLYKFRLAADSSARPLCHIQ*RSGQPG
Trigger: ACCTGGCTGACCAGACCGCCATTGAATATGGCACAA...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTCGGTCACCATCTCCTaGCAGACGGACACCTCAGTT +
Preference number: 4 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPSVTIS*QTDTSV
Trigger: AACTGAGGTGTCCGTCTGCCAGGAGATGGTGACCGA...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGAGTCTCTGCGCGAGCTaGTCGGGCTCCCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: VCEKHRMELQVGAEWHHWSLCAS*SGSPAP
Trigger: CGGGGCAGGGGAGCCCGACCAGCTCGCGCAGAGACT...CCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCACTGGATCCGAAATCTaGAGAGGTGTCGACGCTGTA +
Preference number: 4 (lower is better)
Translates to: EVSTLYKFRLAADSSARPTGSEI*RGVDAV
Trigger: TACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCGGCGCGGTCTCTGGCTaGGGCGTCAGGCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGGAVSG*GVRLLD
Trigger: ATCAAGGAGCCTGACGCCCCAGCCAGAGACCGCGCC...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCATTCCACCAATTCATTaGACTGGTCTGGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: CRRCTSSGWRLTAAPAPPIPPIH*TGLGRD
Trigger: GTCCCTACCCAGACCAGTCCAATGAATTGGTGGAAT...GGGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGGCTTCCGCAGCAGCCGTaGCGGCTCCAGCCCGATCCG +
Preference number: 4 (lower is better)
Translates to: SVRSIGWSCRLEQSGTIGLPQQP*RLQPDP
Trigger: CGGATCGGGCTGGAGCCGCCACGGCTGCTGCGGAAG...CCCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCTCTCTGCCAGCTCCTTaGGCATGTCCACACAGAAGC +
Preference number: 4 (lower is better)
Translates to: SGEVSTLYKFRLAADSSASLPAP*ACPHRS
Trigger: GCTTCTGTGTGGACATGCTCAAGGAGCTGGCAGAGA...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCAGCCAGGTCATCCACTaGCTCAATGGGCACATCCAT +
Preference number: 4 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTSQVIH*LNGHIH
Trigger: ATGGATGTGCCCATTGAGTCAGTGGATGACCTGGCT...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGGGTGGATACTGTCCTaGCACAGGATAATGCTGCGC +
Preference number: 4 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPGWILS*HRIMLR
Trigger: GCGCAGCATTATCCTGTGTCAGGACAGTATCCACCC...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCGTGGACCCTGCTCCCTaGCCGGGCGCGGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCAVDPAP*PGAVSG
Trigger: GCCAGAGACCGCGCCCGGTCAGGGAGCAGGGTCCAC...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCTTGAGACTCTCCATCTaGTTCTTCCCAAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPALRLSI*FFPRLL
Trigger: AAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAA...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR GCA 90 bp ACGCACACGCGCGCACACATACACACACATACACTTGCACCCAGGTCTCACGTCCCATTCCCGTCCAGGTaGCGTTGGCCTCGGGAACGC +
Preference number: 4 (lower is better)
Translates to: THTRAHIHTHTLAPRSHVPFPSR*RWPRER
Trigger: GCGTTCCCGAGGCCAACGGCACCTGGACGGGAATGG...GACGTGAGACCTGGGTGCAAGTGTATGTGTGTGTATGTGTGCGCGCGTGTGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCGAAACCAGAGGCTGTTaGCCAGGGAGTACTGGTTCA +
Preference number: 4 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTETRGC*PGSTGS
Trigger: TGAACCAGTACTCCCTGGGCAACAGCCTCTGGTTTC...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGGATGATCAGCGTGAATaGCCACCAGACGCCACTGAC +
Preference number: 4 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRDDQRE*PPDATD
Trigger: GTCAGTGGCGTCTGGTGGGCATTCACGCTGATCATC...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGACTACTCGGGCTCGCTaGTGTTGGTGGTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRTTRAR*CWWFSP
Trigger: GGGAGAAAACCACCAACAGCAGCGAGCCCGAGTAGT...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCACTACTCGGGCTCGCTaGTGTTGGTGGTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SGEVSTLYKFRLAADSSATTRAR*CWWFSP
Trigger: GGGAGAAAACCACCAACAGCAGCGAGCCCGAGTAGT...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCCAGCTGGCCTTCGGGTaGCCTTCCCACCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSQLAFG*PSHQIH
Trigger: GTGGATTTGGTGGGAAGGGCACCCGAAGGCCAGCTG...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCAGCTGGAGGCTGGGCTaGACGATGGTCCGAGGACAG +
Preference number: 4 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGSWRLG*TMVRGQ
Trigger: CTGTCCTCGGACCATCGTCCAGCCCAGCCTCCAGCT...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCGATGGAGCTGGAGGCTaGGCTGGACGATGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGDGAGG*AGRWSE
Trigger: CTCGGACCATCGTCCAGCCCAGCCTCCAGCTCCATC...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCGTGAATCTCTGGAACTaGAACTTGACGAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPAVNLWN*NLTNSS
Trigger: AGAGGAGTTCGTCAAGTTCCAGTTCCAGAGATTCAC...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCTTCACGCCGATCTCTTaGCTCCGGTTCAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SGEVSTLYKFRLAADSSAFTPIS*LRFSSC
Trigger: GCAGGAACTGAACCGGAGCCAAGAGATCGGCGTGAA...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTAGACGGAGGGTACATTaGCCCCTGACTAGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPRRRVH*PLTRGK
Trigger: TTTCCCCCTAGTCAGGGGCCAATGTACCCTCCGTCT...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCATAGTCTTGGGGGTCTaGCTTCATAGGCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTIVLGV*LHRQPL
Trigger: GAGTGGCTGCCTATGAAGCCAGACCCCCAAGACTAT...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCCAGCGGTGGTGGAGGTaGAGGTGGTTGGTAGCGGCT +
Preference number: 4 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGQRWWR*RWLVAA
Trigger: AGCCGCTACCAACCACCTCCACCTCCACCACCGCTG...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR CAA 72 bp GAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGGGTTaGTTGTCAGCTGGCCTTCGGGTGCCCTTCCCACCA +
Preference number: 4 (lower is better)
Translates to: ELQVGAEWHHWG*LSAGLRVPFPP
Trigger: TGGTGGGAAGGGCACCCGAAGGCCAGCTGACAACAAACCCCAATGGTGCCACTCTGCTCCAACCTGCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCAAGCATGGGATTGGTTaGAAATGGAAAATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPAKHGIG*KWKIPG
Trigger: TCCTGGGATTTTCCATTTTCAACCAATCCCATGCTT...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCACAGCTTCCCGTTGCTaGGCGTCGCCGTGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCATASRC*ASPCPA
Trigger: CGCGGGGCACGGCGACGCTCAGCAACGGGAAGCTGT...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGGGGTACATTGGCCCCTaGCTAGGGGGAAATTCAACT +
Preference number: 4 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRGYIGP*LGGNST
Trigger: AGTTGAATTTCCCCCTAGTCAGGGGCCAATGTACCC...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCGAAAAGAGATGCAGTTaGCAAAGTATGCACCATACC +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPAEKRCS*QSMHHT
Trigger: GGTATGGTGCATACTTTGTCAACTGCATCTCTTTTC...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCAATGAGAACTCTGCGTaGAACTCCCAATTAGTGAAG +
Preference number: 4 (lower is better)
Translates to: VSTLYKFRLAADSSARPANENSA*NSQLVK
Trigger: CTTCACTAATTGGGAGTTTCACGCAGAGTTCTCATT...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGGAATCGGAGGATCTCTaGCAGCTCCTTGAGCATGTC +
Preference number: 4 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRESEDL*QLLEHV
Trigger: GACATGCTCAAGGAGCTGGCAGAGATCCTCCGATTC...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCCTGTTGAATTCAATGTaGCCGGTAAGACCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: CRRCTSSGWRLTAAPAPPLLNSM*PVRPSN
Trigger: ATTGGAAGGTCTTACCGGCCACATTGAATTCAACAG...GGGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGGAGTGTCCGAGATGTTaGAGGCATAGAGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRECPRC*RHRGGC
Trigger: ACAGCCACCTCTATGCCTCCAACATCTCGGACACTC...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCGACGCCCGGAGAAAATaGGTCCAGGAAGGAGAAATA +
Preference number: 4 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPDARRK*VQEGEI
Trigger: TATTTCTCCTTCCTGGACCCATTTTCTCCGGGCGTC...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CACGTTGTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACAGGTTGCACCGGCCCTaGGCACATGGGTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: HVVCEKHRMELQVGAEWHRLHRP*AHGCGL
Trigger: CAGCCCACACCCATGTGCCCAGGGCCGGTGCAACCT...GTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGACAACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCAGTCTCTGCGCGAGCTaGTCGGGCTCCCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCASLCAS*SGSPAP
Trigger: CGGGGCAGGGGAGCCCGACCAGCTCGCGCAGAGACT...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCGCTCGCTGCTGTTGGTaGTTTTCTCCCACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSARCCW*FSPTPG
Trigger: GCCTGGAGTGGGAGAAAACCACCAACAGCAGCGAGC...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCCTTCCGCAGCAGCCGTaGCGGCTCCAGCCCGATCCG +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCALPQQP*RLQPDP
Trigger: CGGATCGGGCTGGAGCCGCCACGGCTGCTGCGGAAG...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCAGCAAGGTGAGGCCCTaGTCTCAGCAGCTAACAGAA +
Preference number: 4 (lower is better)
Translates to: SGEVSTLYKFRLAADSSASKVRP*SQQLTE
Trigger: TTCTGTTAGCTGCTGAGACCAGGGCCTCACCTTGCT...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp TTGGCCCCCAGGACGGCAGCCCTAACTGATTGTCCTGGCATAAAGAGGATGCCGGCGGGGCATCTTCTATaGATCCTCATGGAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LAPRTAALTDCPGIKRMPAGHLL*ILMEPP
Trigger: AGGGGGCTCCATGAGGATTCATAGAAGATGCCCCGC...CGGCATCCTCTTTATGCCAGGACAATCAGTTAGGGCTGCCGTCCTGGGGGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp CACGTTGTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACTCTCAGGAGCGCGGTTaGTGCGGTTCTTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: HVVCEKHRMELQVGAEWHSQERG*CGSWPG
Trigger: CCCTGGCCAAGAACCGCATCAACCGCGCTCCTGAGA...GTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGACAACGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCGGGGCCACTTTGAAGTaGGGGACCTCCTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGGATLK*GTSFSP
Trigger: TGGAGAGAAGGAGGTCCCTCACTTCAAAGTGGCCCC...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CAAGCAGCTGTAGAAAGCCTCGCCCCTCCCATCAGATGTGTGCTCTGGACTCTGCCTCATGGAGCCCCCTaGTGGCCTGGGCATGACATA +
Preference number: 4 (lower is better)
Translates to: QAAVESLAPPIRCVLWTLPHGAP*WPGHDI
Trigger: TATGTCATGCCCAGGCCAGCAGGGGGCTCCATGAGG...CAGAGTCCAGAGCACACATCTGATGGGAGGGGCGAGGCTTTCTACAGCTGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGCTGACACATGGTTTCTaGAGTCTCGTACTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRLTHGF*SLVLAV
Trigger: GACAGCGAGTACGAGACTGCAGAAACCATGTGTCAG...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGGCATGCTGAGGCCCTCTaGCACGTGCCACTGGCCGAT +
Preference number: 4 (lower is better)
Translates to: SVRSIGWSCRLEQSGTIGHAEAL*HVPLAD
Trigger: ATCGGCCAGTGGCACGTGGCAGAGGGCCTCAGCATG...CCCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp TCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGGGGTTCACCAGGAGGTTaGACCGGCCCTGGGCACATG +
Preference number: 4 (lower is better)
Translates to: SVRSIGWSCRLEQSGTIGGSPGG*TGPGHM
Trigger: CATGTGCCCAGGGCCGGTGCAACCTCCTGGTGAACC...CCCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp CAAGCAGCTGTAGAAAGCCTCGCCCCTCCCATCAGATGTGTGCTCTGGACTCTGCCGAGCCGACTGGCATaGCAATCCCATAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: QAAVESLAPPIRCVLWTLPSRLA*QSHSPW
Trigger: CCAAGGGCTATGGGATTGGCATGCCAGTCGGCTCGG...CAGAGTCCAGAGCACACATCTGATGGGAGGGGCGAGGCTTTCTACAGCTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAACTGGTCGGGCTCCCCTaGCCCGCACAGCTTCCCGTT +
Preference number: 4 (lower is better)
Translates to: PPPYTLVILARGKDPLGELVGLP*PAQLPV
Trigger: AACGGGAAGCTGTGCGGGGCAGGGGAGCCCGACCAG...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CACGTTGTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACGAAGATGGGTCCTTGTaGCCAGGAGGGAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: HVVCEKHRMELQVGAEWHEDGSL*PGGRAV
Trigger: GACGGCCCTCCCTCCTGGGCACAAGGACCCATCTTC...GTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGACAACGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp TCCGCCTCTGTGAACGGCACGTTCCACCGGAAGCCAAGGCCATGGTATGGGAAACATGGAGCCCCCTGCTaGCCTGGGCATGACATAACT +
Preference number: 4 (lower is better)
Translates to: SASVNGTFHRKPRPWYGKHGAPC*PGHDIT
Trigger: AGTTATGTCATGCCCAGGCCAGCAGGGGGCTCCATG...TTTCCCATACCATGGCCTTGGCTTCCGGTGGAACGTGCCGTTCACAGAGGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp TTGGCCCCCAGGACGGCAGCCCTAACTGATTGTCCTGGCATAAAGAGGATGCCGTGTCCACTTCGACCTTaGCCTTGCCCAGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LAPRTAALTDCPGIKRMPCPLRP*PCPASQ
Trigger: CTGAGAGGCTGGGCAAGGCCAAGGTCGAAGTGGACA...CGGCATCCTCTTTATGCCAGGACAATCAGTTAGGGCTGCCGTCCTGGGGGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCGGAGGATCTGACACATaGTTTCTGCAGTCTCGTACT +
Preference number: 4 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPGGSDT*FLQSRT
Trigger: AGTACGAGACTGCAGAAACCATGTGTCAGATCCTCC...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCTCAGTGTTGCTGGGGTaGAGGTTCAGGGTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: SGEVSTLYKFRLAADSSASVLLG*RFRVVN
Trigger: ATTCACAACCCTGAACCTCCACCCCAGCAACACTGA...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGTGTACAAGTTCCGGCTaGCGGCTGACAGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: VCEKHRMELQVGAEWHHWCTSSG*RLTAAP
Trigger: GGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACA...CCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCCCGTCCTTTGCCCTTTaGGTGCAACGTTTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGPSFAL*VQRFRV
Trigger: CACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGG...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCAAAATCCCAGGATGTTaGCACGATCATCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: SGEVSTLYKFRLAADSSAKIPGC*HDHPQG
Trigger: GCCTTGTGGATGATCGTGTCAACATCCTGGGATTTT...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp TCCGCCTCTGTGAACGGCACGTTCCACCGGAAGCCAAGGCCATGGTATGGGAAAGGGTGGATACTGTCCTaGCACAGGATAATGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SASVNGTFHRKPRPWYGKGWILS*HRIMLR
Trigger: GCGCAGCATTATCCTGTGTCAGGACAGTATCCACCC...TTTCCCATACCATGGCCTTGGCTTCCGGTGGAACGTGCCGTTCACAGAGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTTGAGACTCTCCATCTaGTTCTTCCCAAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPLRLSI*FFPRLL
Trigger: AAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAA...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR GCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGGGCCGGCCGCGGGGCTaGTGTTGGCCGTTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SCYFGERERPTGRRWVLVGRPRG*CWPFFL
Trigger: GAGGAAAAACGGCCAACAGCAGCCCCGCGGCCGGCC...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCCCTCGTAGCGGTCATTaGCTTCCATCTCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGPRSGH*LPSPGG
Trigger: ACCACCAGGAGATGGAAGGCAATGACCGCTACGAGG...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TCCGCCTCTGTGAACGGCACGTTCCACCGGAAGCCAAGGCCATGGTATGGGAAACCTCGTAGCGGTCATTaGCTTCCATCTCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SASVNGTFHRKPRPWYGKPRSGH*LPSPGG
Trigger: ACCACCAGGAGATGGAAGGCAATGACCGCTACGAGG...TTTCCCATACCATGGCCTTGGCTTCCGGTGGAACGTGCCGTTCACAGAGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGTCCTGCGCCAGTCTCTaGGCGAGCTGGTCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SCYFGERERPTGRRWVLVSCASL*ASWSGS
Trigger: GGAGCCCGACCAGCTCGCGCAGAGACTGGCGCAGGA...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CAAGCAGCTGTAGAAAGCCTCGCCCCTCCCATCAGATGTGTGCTCTGGACTCTGCCTTTGCCCTTTGGGTaGAACGTTTCCGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: QAAVESLAPPIRCVLWTLPLPFG*NVSGWT
Trigger: GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGG...CAGAGTCCAGAGCACACATCTGATGGGAGGGGCGAGGCTTTCTACAGCTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCCTTGACGAACTCCTCTaGGGCCACTTTGAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSLDELL*GHFEVR
Trigger: CCTCACTTCAAAGTGGCCCCAGAGGAGTTCGTCAAG...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCAGGCTGTCCATTCTCTaGAGTGAGAACTCCAGATTA +
Preference number: 4 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPRLSIL*SENSRL
Trigger: TAATCTGGAGTTCTCACTCCAGAGAATGGACAGCCT...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTTCACGCCGATCTCTTaGCTCCGGTTCAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGFTPIS*LRFSSC
Trigger: GCAGGAACTGAACCGGAGCCAAGAGATCGGCGTGAA...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCTGTTGAATTCAATGTaGCCGGTAAGACCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: ERCRRCTSSGWRLTAAPALLNSM*PVRPSN
Trigger: ATTGGAAGGTCTTACCGGCCACATTGAATTCAACAG...GGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTTTTCAAAGCGTAGTTaGACCTCTGGCCTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPFSKRS*TSGLCC
Trigger: ACAGCAAAGGCCAGAGGTCCAACTACGCTTTGAAAA...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCCCGTCCAGGTGCCGTTaGCCTCGGGAACGCCGTACA +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCAPSRCR*PRERRT
Trigger: TGTACGGCGTTCCCGAGGCCAACGGCACCTGGACGG...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCAGGTTGCACCGGCCCTaGGCACATGGGTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCARLHRP*AHGCGL
Trigger: CAGCCCACACCCATGTGCCCAGGGCCGGTGCAACCT...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ACGCACACGCGCGCACACATACACACACATACACTTGCACCCAGGTCTCACGTCCAATCCCATAGCCCTTaGTGTCCAGCAGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: THTRAHIHTHTLAPRSHVQSHSP*CPAGPQ
Trigger: TTGGGGGCCTGCTGGACACCAAGGGCTATGGGATTG...GACGTGAGACCTGGGTGCAAGTGTATGTGTGTGTATGTGTGCGCGCGTGTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCCTGCTGGCCTGGGCATaGCATAACTCTGCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCALLAWA*HNSAAA
Trigger: CGCCGCAGCAGAGTTATGTCATGCCCAGGCCAGCAG...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438375.2
CDS-3UTR TCA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGGGTTCTTGGCCAGGGTaGTGGAGAGCCGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PYTLVILARGKDPLGEDGGSWPG*WRAAPL
Trigger: GAGGGGAGCGGCTCTCCATCACCCTGGCCAAGAACC...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CAAGCAGCTGTAGAAAGCCTCGCCCCTCCCATCAGATGTGTGCTCTGGACTCTGAGGCGGTGGTGCAGTTaGAGAAGTTCAGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: QAAVESLAPPIRCVLWTLRRWCS*RSSGSQ
Trigger: CTGGGATCCTGAACTTCTTCAACTGCACCACCGCCT...CAGAGTCCAGAGCACACATCTGATGGGAGGGGCGAGGCTTTCTACAGCTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGTCCATTCTCTGGAGTaGGAACTCCAGATTAGTGAA +
Preference number: 4 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPVHSLE*ELQISE
Trigger: TTCACTAATCTGGAGTTCTCACTCCAGAGAATGGAC...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCTTGCTTCTGAGTGTCTaGGAGTCCATAAAAACTCCA +
Preference number: 4 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTLLLSV*ESIKTP
Trigger: TGGAGTTTTTATGGACTCTCAGACACTCAGAAGCAA...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGAGGCCCTCTGCCACGTaGCACTGGCCGATCTGCCGA +
Preference number: 4 (lower is better)
Translates to: PYTLVILARGKDPLGEDGRPSAT*HWPICR
Trigger: TCGGCAGATCGGCCAGTGGCACGTGGCAGAGGGCCT...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCATTCCCGTCCAGGTaGCGTTGGCCTCGGGAACGC +
Preference number: 4 (lower is better)
Translates to: SCYFGERERPTGRRWVLVPFPSR*RWPRER
Trigger: GCGTTCCCGAGGCCAACGGCACCTGGACGGGAATGG...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCGGCACATCCATGCGCTaGACGGTCAGGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCAGTSMR*TVRKAA
Trigger: GGCAGCCTTCCTGACCGTGCAGCGCATGGATGTGCC...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTACATGTAATTCCACATaGGTTGGTAGGTCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPTCNST*VGRSGS
Trigger: GCTACCAGACCTACCAACGCATGTGGAATTACATGT...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCTCCTGCGCCAGTCTCTaGGCGAGCTGGTCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: WTFETLHLILPKTPSPVLSCASL*ASWSGS
Trigger: GGAGCCCGACCAGCTCGCGCAGAGACTGGCGCAGGA...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR GCA 90 bp CACGTTGTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACGGGAGGGCCGTCCTTTaGCCTTTGGGTGCAACGTTT +
Preference number: 4 (lower is better)
Translates to: HVVCEKHRMELQVGAEWHGRAVL*PLGATF
Trigger: AAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCC...GTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGACAACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCGCACCTGAAATCGGATaGACTGGTAACGCAATATTC +
Preference number: 4 (lower is better)
Translates to: SGEVSTLYKFRLAADSSAAPEIG*TGNAIF
Trigger: GAATATTGCGTTACCAGTGCATCCGATTTCAGGTGC...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGGTGAATCTCTGGAACTaGAACTTGACGAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRVNLWN*NLTNSS
Trigger: AGAGGAGTTCGTCAAGTTCCAGTTCCAGAGATTCAC...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGAGGCTGTCCATTCTCTaGAGTGAGAACTCCAGATTA +
Preference number: 4 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRRLSIL*SENSRL
Trigger: TAATCTGGAGTTCTCACTCCAGAGAATGGACAGCCT...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCTTTTCAAAGCGTAGTTaGACCTCTGGCCTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SGEVSTLYKFRLAADSSAFSKRS*TSGLCC
Trigger: ACAGCAAAGGCCAGAGGTCCAACTACGCTTTGAAAA...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCGAGTGTCCGAGATGTTaGAGGCATAGAGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGECPRC*RHRGGC
Trigger: ACAGCCACCTCTATGCCTCCAACATCTCGGACACTC...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCTTGCCTTCCATCTCCTaGTGGTTCCCCTTCAGCATT +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSLPSIS*WFPFSI
Trigger: AATGCTGAAGGGGAACCACCAGGAGATGGAAGGCAA...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGAGGTTGCACCGGCCCTaGGCACATGGGTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SCYFGERERPTGRRWVLVRLHRP*AHGCGL
Trigger: CAGCCCACACCCATGTGCCCAGGGCCGGTGCAACCT...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCTATTCAATGGCGGTCTaGTCAGCCAGGTCATCCACT +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSYSMAV*SARSST
Trigger: AGTGGATGACCTGGCTGACCAGACCGCCATTGAATA...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp AGGTCAAGCAGCTGTAGAAAGCCTCGCCCCTCCCATCAGATGTGTGCTCTGGACGAAAACCGAGCCGACTaGCATGCCAATCCCATAGCC +
Preference number: 4 (lower is better)
Translates to: RSSSCRKPRPSHQMCALDENRAD*HANPIA
Trigger: GGCTATGGGATTGGCATGCCAGTCGGCTCGGTTTTC...GTCCAGAGCACACATCTGATGGGAGGGGCGAGGCTTTCTACAGCTGCTTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp ACGCACACGCGCGCACACATACACACACATACACTTGCACCCAGGTCTCACGTCTCGGTCACCATCTCCTaGCAGACGGACACCTCAGTT +
Preference number: 4 (lower is better)
Translates to: THTRAHIHTHTLAPRSHVSVTIS*QTDTSV
Trigger: AACTGAGGTGTCCGTCTGCCAGGAGATGGTGACCGA...GACGTGAGACCTGGGTGCAAGTGTATGTGTGTGTATGTGTGCGCGCGTGTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp GTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGCGGGCTCGCTGCTGTTaGTGGTTTTCTCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: VCEKHRMELQVGAEWHHWRARCC*WFSPTP
Trigger: TGGAGTGGGAGAAAACCACCAACAGCAGCGAGCCCG...CCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp GTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGTCAGAAAGTATCTGCTaGTCGGCTCCGCACTCCGGG +
Preference number: 4 (lower is better)
Translates to: VCEKHRMELQVGAEWHHWSESIC*SAPHSG
Trigger: CCCGGAGTGCGGAGCCGACCAGCAGATACTTTCTGA...CCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCTTCAAGTCTAGTACCTaGATATTAGACACACTGAAC +
Preference number: 4 (lower is better)
Translates to: EVSTLYKFRLAADSSARPFKSST*ILDTLN
Trigger: GTTCAGTGTGTCTAATATCCAGGTACTAGACTTGAA...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp TTGGCCCCCAGGACGGCAGCCCTAACTGATTGTCCTGGCATAAAGAGGATGCCGGTATGTGTAATAGGCTaGCACCATCCCAAGTTCGGC +
Preference number: 4 (lower is better)
Translates to: LAPRTAALTDCPGIKRMPVCVIG*HHPKFG
Trigger: GCCGAACTTGGGATGGTGTCAGCCTATTACACATAC...CGGCATCCTCTTTATGCCAGGACAATCAGTTAGGGCTGCCGTCCTGGGGGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp CAGAAACCGTCTAGTGCTGGCAGTCTTATCTTGATTCCACACGGAGAAAGAAACGGTGGCTGTCCATGCTaGGGCCCTCTGCCACGTGCC +
Preference number: 4 (lower is better)
Translates to: QKPSSAGSLILIPHGERNGGCPC*GPLPRA
Trigger: GGCACGTGGCAGAGGGCCTCAGCATGGACAGCCACC...GTTTCTTTCTCCGTGTGGAATCAAGATAAGACTGCCAGCACTAGACGGTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTTTGCTTCTGAGTGTCTaGGAGTCCATAAAAACTCCA +
Preference number: 4 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPLLLSV*ESIKTP
Trigger: TGGAGTTTTTATGGACTCTCAGACACTCAGAAGCAA...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGTCAAGGAGTGCGGGCTaGAGGCGACCATCACGAGCC +
Preference number: 4 (lower is better)
Translates to: SCYFGERERPTGRRWVLVSRSAG*RRPSRA
Trigger: GGCTCGTGATGGTCGCCTGCAGCCCGCACTCCTTGA...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGCTTCGACCTTGGCCTTaGCCAGCCTCTCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: PYTLVILARGKDPLGEDGLRPWP*PASQER
Trigger: GCGCTCCTGAGAGGCTGGGCAAGGCCAAGGTCGAAG...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCTTGGAGATAAGGAATTaGCGGAGCAGCTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSLEIRN*RSSFSR
Trigger: CCTAGAGAAGCTGCTCCGGCAATTCCTTATCTCCAA...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCCCATTCCCGTCCAGGTaGCGTTGGCCTCGGGAACGC +
Preference number: 4 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPPFPSR*RWPRER
Trigger: GCGTTCCCGAGGCCAACGGCACCTGGACGGGAATGG...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGGGCACATCCATGCGCTaGACGGTCAGGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SCYFGERERPTGRRWVLVGTSMR*TVRKAA
Trigger: GGCAGCCTTCCTGACCGTGCAGCGCATGGATGTGCC...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCCCGAGCCGACTGGCATaGCAATCCCATAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCAPSRLA*QSHSPW
Trigger: CCAAGGGCTATGGGATTGGCATGCCAGTCGGCTCGG...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TCCGCCTCTGTGAACGGCACGTTCCACCGGAAGCCAAGGCCATGGTATGGGAAAGCAGTTGACAAAGTATaGACCATACCAACGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SASVNGTFHRKPRPWYGKAVDKV*TIPTGW
Trigger: CCACCCCGTTGGTATGGTGCATACTTTGTCAACTGC...TTTCCCATACCATGGCCTTGGCTTCCGGTGGAACGTGCCGTTCACAGAGGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGGATGGAGCTGGAGGCTaGGCTGGACGATGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: PYTLVILARGKDPLGEDGDGAGG*AGRWSE
Trigger: CTCGGACCATCGTCCAGCCCAGCCTCCAGCTCCATC...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TCCGCCTCTGTGAACGGCACGTTCCACCGGAAGCCAAGGCCATGGTATGGGAAATCAGTGTTGCTGGGGTaGAGGTTCAGGGTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: SASVNGTFHRKPRPWYGKSVLLG*RFRVVN
Trigger: ATTCACAACCCTGAACCTCCACCCCAGCAACACTGA...TTTCCCATACCATGGCCTTGGCTTCCGGTGGAACGTGCCGTTCACAGAGGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCCTCTGGGCAAACTCTTaGAAGAAAGCATGGGATTGG +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSLWANS*KKAWDW
Trigger: CCAATCCCATGCTTTCTTCCAAGAGTTTGCCCAGAG...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGCTGTTGAATTCAATGTaGCCGGTAAGACCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRLLNSM*PVRPSN
Trigger: ATTGGAAGGTCTTACCGGCCACATTGAATTCAACAG...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCGACGCCCGGAGAAAATaGGTCCAGGAAGGAGAAATA +
Preference number: 4 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGDARRK*VQEGEI
Trigger: TATTTCTCCTTCCTGGACCCATTTTCTCCGGGCGTC...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGGGATGGAGCTGCAGGTTaGAGCAGAGTGGCACCATTG +
Preference number: 4 (lower is better)
Translates to: SVRSIGWSCRLEQSGTIGDGAAG*SRVAPL
Trigger: CAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATC...CCCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGCGGGGCATCTTCTATaGATCCTCATGGAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PPPYTLVILARGKDPLGEAGHLL*ILMEPP
Trigger: AGGGGGCTCCATGAGGATTCATAGAAGATGCCCCGC...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGCTGCTTTGGCACAGATaGGGCAGGCGGTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PYTLVILARGKDPLGEDGLLWHR*GRRWCS
Trigger: ACTGCACCACCGCCTGCCTCATCTGTGCCAAAGCAG...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCATGCTGGAGCCTCCGTaGATTGTGCCATATTCAATG +
Preference number: 4 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGMLEPP*IVPYSM
Trigger: CATTGAATATGGCACAATTCACGGAGGCTCCAGCAT...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp ACGCACACGCGCGCACACATACACACACATACACTTGCACCCAGGTCTCACGTCATGAGTGAGGTCAGGTaGGGACAAAACGAGTATCCC +
Preference number: 4 (lower is better)
Translates to: THTRAHIHTHTLAPRSHVMSEVR*GQNEYP
Trigger: GGGATACTCGTTTTGTCCTCACCTGACCTCACTCAT...GACGTGAGACCTGGGTGCAAGTGTATGTGTGTGTATGTGTGCGCGCGTGTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGCCTCATGGAGCCCCCTaGTGGCCTGGGCATGACATA +
Preference number: 4 (lower is better)
Translates to: PYTLVILARGKDPLGEDGPHGAP*WPGHDI
Trigger: TATGTCATGCCCAGGCCAGCAGGGGGCTCCATGAGG...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCGCGATCCTCAAGGAGTaGGGGCTGCAGGCGACCATC +
Preference number: 4 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPAILKE*GLQATI
Trigger: GATGGTCGCCTGCAGCCCGCACTCCTTGAGGATCGC...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCAGAGCCGCTCCCCTCTaGTGCACTCCATGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPRAAPL*CTPWGR
Trigger: ACGACCCCATGGAGTGCAGCAGAGGGGAGCGGCTCT...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGGGGTGTCATCCAGCATaGGGACGGACAGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SCYFGERERPTGRRWVLVGCHPA*GRTACP
Trigger: AGGACACGCTGTCCGTCCGCATGCTGGATGACACCC...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCCATGCTGAGGCCCTCTaGCACGTGCCACTGGCCGAT +
Preference number: 4 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPHAEAL*HVPLAD
Trigger: ATCGGCCAGTGGCACGTGGCAGAGGGCCTCAGCATG...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp ACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGGCACATCCATGCGCTaGACGGTCAGGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TLYSCYFGERERPTGRRWGTSMR*TVRKAA
Trigger: GGCAGCCTTCCTGACCGTGCAGCGCATGGATGTGCC...CCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCAGCCTCCGTGAATTGTaGCATATTCAATGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGSLREL*HIQWRS
Trigger: AGACCGCCATTGAATATGGCACAATTCACGGAGGCT...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TTTCTGTTGAATAAATACACACACGCACACGCGCGCACACATACACACACATACCTGGTCGGGCTCCCCTaGCCCGCACAGCTTCCCGTT +
Preference number: 4 (lower is better)
Translates to: FLLNKYTHAHARTHTHTYLVGLP*PAQLPV
Trigger: AACGGGAAGCTGTGCGGGGCAGGGGAGCCCGACCAG...GTATGTGTGTGTATGTGTGCGCGCGTGTGCGTGTGTGTATTTATTCAACAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCCCTTTGCCCTTTGGGTaGAACGTTTCCGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCAPLPFG*NVSGWT
Trigger: GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGG...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCGGAGGATCTGACACATaGTTTCTGCAGTCTCGTACT +
Preference number: 4 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGGGSDT*FLQSRT
Trigger: AGTACGAGACTGCAGAAACCATGTGTCAGATCCTCC...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGAGCTGGAGGCTGGGCTaGACGATGGTCCGAGGACAG +
Preference number: 4 (lower is better)
Translates to: TLYSCYFGERERPTGRRWSWRLG*TMVRGQ
Trigger: CTGTCCTCGGACCATCGTCCAGCCCAGCCTCCAGCT...CCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCGTGAATCTCTGGAACTaGAACTTGACGAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSVNLWN*NLTNSS
Trigger: AGAGGAGTTCGTCAAGTTCCAGTTCCAGAGATTCAC...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGGGTTGTGAATCTCTaGAACTGGAACTTGACGAAC +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSRVVNL*NWNLTN
Trigger: GTTCGTCAAGTTCCAGTTCCAGAGATTCACAACCCT...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCCTCTGGGCAAACTCTTaGAAGAAAGCATGGGATTGG +
Preference number: 4 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGLWANS*KKAWDW
Trigger: CCAATCCCATGCTTTCTTCCAAGAGTTTGCCCAGAG...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ACCACCCAATCCATGATAGTCTTGGGGGTCTGGCTTCATAGGCAGCCACTCATTTCTGCCACGTGCCACTaGCCGATCTGCCGAAAACCA +
Preference number: 4 (lower is better)
Translates to: TTQSMIVLGVWLHRQPLISATCH*PICRKP
Trigger: TGGTTTTCGGCAGATCGGCCAGTGGCACGTGGCAGA...AATGAGTGGCTGCCTATGAAGCCAGACCCCCAAGACTATCATGGATTGGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp TTGGCCCCCAGGACGGCAGCCCTAACTGATTGTCCTGGCATAAAGAGGATGCCGCCTTCCATCTCCTGGTaGTTCCCCTTCAGCATTAAA +
Preference number: 4 (lower is better)
Translates to: LAPRTAALTDCPGIKRMPPSISW*FPFSIK
Trigger: TTTAATGCTGAAGGGGAACCACCAGGAGATGGAAGG...CGGCATCCTCTTTATGCCAGGACAATCAGTTAGGGCTGCCGTCCTGGGGGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTTCCCAGAGTCATGAATaGCTTAGAGAAATCAATCAC +
Preference number: 4 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPSQSHE*LREINH
Trigger: GTGATTGATTTCTCTAAGCCATTCATGACTCTGGGA...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TTTCTGTTGAATAAATACACACACGCACACGCGCGCACACATACACACACATACCCTCTGCGCGTCCTGTaGCCTCCGGGACTACTCGGG +
Preference number: 4 (lower is better)
Translates to: FLLNKYTHAHARTHTHTYPLRVL*PPGLLG
Trigger: CCCGAGTAGTCCCGGAGGCCACAGGACGCGCAGAGG...GTATGTGTGTGTATGTGTGCGCGCGTGTGCGTGTGTGTATTTATTCAACAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCTGTACAAGTTCCGGCTaGCGGCTGACAGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: WTFETLHLILPKTPSPVLCTSSG*RLTAAP
Trigger: GGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACA...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp CAGAAACCGTCTAGTGCTGGCAGTCTTATCTTGATTCCACACGGAGAAAGAAACGGCGCGGTCTCTGGCTaGGGCGTCAGGCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: QKPSSAGSLILIPHGERNGAVSG*GVRLLD
Trigger: ATCAAGGAGCCTGACGCCCCAGCCAGAGACCGCGCC...GTTTCTTTCTCCGTGTGGAATCAAGATAAGACTGCCAGCACTAGACGGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCCCGTCCTTTGCCCTTTaGGTGCAACGTTTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCAPSFAL*VQRFRV
Trigger: CACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGG...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGGGTGAGAAGCATAGGATaGAGCTGCAGGTTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SVRSIGWSCRLEQSGTIGVRSIG*SCRLEQ
Trigger: CTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCAC...CCCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGAGGAAGAGTATTAGCTaGTTGCAAATTCACCCACTA +
Preference number: 4 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRRKSIS*LQIHPL
Trigger: TAGTGGGTGAATTTGCAACCAGCTAATACTCTTCCT...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
3UTR CAA 72 bp TACGACTCAAGAGTTCCTGGTTCCCAGGCCCGTGTATaGACTAGGAGACTCCACCTCTCTCCCAGGAACCTA +
Preference number: 4 (lower is better)
Translates to: YDSRVPGSQARV*TRRLHLSPRNL
Trigger: TAGGTTCCTGGGAGAGAGGTGGAGTCTCCTAGTCAATACACGGGCCTGGGAACCAGGAACTCTTGAGTCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGCCTCTGGGGCCACTTTaGAGTGAGGGACCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PYTLVILARGKDPLGEDGPLGPL*SEGPPS
Trigger: AGAAGGAGGTCCCTCACTTCAAAGTGGCCCCAGAGG...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAATCTGGAACTGGAACTTaGCGAACTCCTCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PPPYTLVILARGKDPLGESGTGT*RTPLGP
Trigger: TGGCCCCAGAGGAGTTCGTCAAGTTCCAGTTCCAGA...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGGATAGGCTAGAAGCATaGAGAGCCAGACGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: PYTLVILARGKDPLGEDGDRLEA*RARRPE
Trigger: CTCCGGGCGTCTGGCTCTTCATGCTTCTAGCCTATC...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGGAAGAGGACACAGCTaGCGGCCAGATAGGCTAGAA +
Preference number: 4 (lower is better)
Translates to: PPPYTLVILARGKDPLGEGRGHS*RPDRLE
Trigger: TTCTAGCCTATCTGGCCGTCAGCTGTGTCCTCTTCC...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CACGTTGTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACTGTAATGGTGAGGCCTaGCACAGCCAGATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: HVVCEKHRMELQVGAEWHCNGEA*HSQICF
Trigger: AAAGCAGATCTGGCTGTGGCAGGCCTCACCATTACA...GTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGACAACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCGATGATCAGCGTGAATaGCCACCAGACGCCACTGAC +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCADDQRE*PPDATD
Trigger: GTCAGTGGCGTCTGGTGGGCATTCACGCTGATCATC...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCACTACTCGGGCTCGCTaGTGTTGGTGGTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCATTRAR*CWWFSP
Trigger: GGGAGAAAACCACCAACAGCAGCGAGCCCGAGTAGT...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CAAGCAGCTGTAGAAAGCCTCGCCCCTCCCATCAGATGTGTGCTCTGGACTCTGGTGTGCTCTGGACTCTaGAAACTTCTCACATGGAGA +
Preference number: 4 (lower is better)
Translates to: QAAVESLAPPIRCVLWTLVCSGL*KLLTWR
Trigger: TCTCCATGTGAGAAGTTTGCAGAGTCCAGAGCACAC...CAGAGTCCAGAGCACACATCTGATGGGAGGGGCGAGGCTTTCTACAGCTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAATTCTATGAATCCTCATaGAGCCCCCTGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PPPYTLVILARGKDPLGEFYESS*SPLLAW
Trigger: CCAGGCCAGCAGGGGGCTCCATGAGGATTCATAGAA...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACACCGTGCTGCCAGATCTaGGCCGAGCCGCAGGACAAG +
Preference number: 4 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTPCCQI*AEPQDK
Trigger: CTTGTCCTGCGGCTCGGCCCAGATCTGGCAGCACGG...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTTTTCAAAGCGTAGTTaGACCTCTGGCCTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGFSKRS*TSGLCC
Trigger: ACAGCAAAGGCCAGAGGTCCAACTACGCTTTGAAAA...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGTTGCCTTCCATCTCCTaGTGGTTCCCCTTCAGCATT +
Preference number: 4 (lower is better)
Translates to: VCEKHRMELQVGAEWHHWLPSIS*WFPFSI
Trigger: AATGCTGAAGGGGAACCACCAGGAGATGGAAGGCAA...CCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACACCGTCCAGGTGCCGTTaGCCTCGGGAACGCCGTACA +
Preference number: 4 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTPSRCR*PRERRT
Trigger: TGTACGGCGTTCCCGAGGCCAACGGCACCTGGACGG...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACACCGGCCCTGGGCACATaGGTGTGGGCTGTACCACTC +
Preference number: 4 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTPALGT*VWAVPL
Trigger: GAGTGGTACAGCCCACACCCATGTGCCCAGGGCCGG...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ACCACCCAATCCATGATAGTCTTGGGGGTCTGGCTTCATAGGCAGCCACTCATTCCTGCAGCTGGAGAATaGCCAGATCAAACTCGTCCC +
Preference number: 4 (lower is better)
Translates to: TTQSMIVLGVWLHRQPLIPAAGE*PDQTRP
Trigger: GGGACGAGTTTGATCTGGCCATTCTCCAGCTGCAGG...AATGAGTGGCTGCCTATGAAGCCAGACCCCCAAGACTATCATGGATTGGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp GTATGGGAAAATTCTATCTGCTCTTTCCGCTCCTTAAACAAAGTCCTAGGATACAGTCTCTGCGCGAGCTaGTCGGGCTCCCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: VWENSICSFRSLNKVLGYSLCAS*SGSPAP
Trigger: CGGGGCAGGGGAGCCCGACCAGCTCGCGCAGAGACT...GTATCCTAGGACTTTGTTTAAGGAGCGGAAAGAGCAGATAGAATTTTCCCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCGGGCTCGCTGCTGTTaGTGGTTTTCTCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: SCYFGERERPTGRRWVLVRARCC*WFSPTP
Trigger: TGGAGTGGGAGAAAACCACCAACAGCAGCGAGCCCG...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TCTCAAAGTTTACTGCAATGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACCGGGCGCGGTCTCTaGCTGGGGCGTCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SQSLLQWTFETLHLILPKTGRGL*LGRQAP
Trigger: AGGAGCCTGACGCCCCAGCCAGAGACCGCGCCCGGT...CTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
3UTR CAA 72 bp TCCCGCCCCAAATGTGATCTGACAGTAGGAACCACGTaGTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SRPKCDLTVGTT*SVRSIGWSCRL
Trigger: CAACCTGCAGCTCCATCCTATGCTTCTCACAGACAACGTGGTTCCTACTGTCAGATCACATTTGGGGCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACATCTCAGGAGCGCGGTTaGTGCGGTTCTTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTSQERG*CGSWPG
Trigger: CCCTGGCCAAGAACCGCATCAACCGCGCTCCTGAGA...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCTGGAACTGGAACTTaGCGAACTCCTCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PYTLVILARGKDPLGEDGSGTGT*RTPLGP
Trigger: TGGCCCCAGAGGAGTTCGTCAAGTTCCAGTTCCAGA...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCGGCGGATCTTGTAGTTaGATCGGAGGATCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCAGGSCS*IGGSLP
Trigger: TGGCAGAGATCCTCCGATTCAACTACAAGATCCGCC...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGGCGGATCTTGTAGTTaGATCGGAGGATCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: PPPYTLVILARGKDPLGEGGSCS*IGGSLP
Trigger: TGGCAGAGATCCTCCGATTCAACTACAAGATCCGCC...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGGGAAGAGGACACAGCTaGCGGCCAGATAGGCTAGAA +
Preference number: 4 (lower is better)
Translates to: SCYFGERERPTGRRWVLVGRGHS*RPDRLE
Trigger: TTCTAGCCTATCTGGCCGTCAGCTGTGTCCTCTTCC...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACACTGCGGCGGCGGCCGTaGCCTTTAGGGTGCATTAGT +
Preference number: 4 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTLRRRP*PLGCIS
Trigger: ACTAATGCACCCTAAAGGGCACGGCCGCCGCCGCAG...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438375.2
CDS-3UTR GCA 90 bp GACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGATGAGTCATGCTGAGGCCCTCTaGCACGTGCCACTGGCCGAT +
Preference number: 4 (lower is better)
Translates to: DRLTLDIPGVSRSEYRMSHAEAL*HVPLAD
Trigger: ATCGGCCAGTGGCACGTGGCAGAGGGCCTCAGCATG...ACTCATCCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR GCA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGCCTCGTAGCGGTCATTaGCTTCCATCTCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PYTLVILARGKDPLGEDGPRSGH*LPSPGG
Trigger: ACCACCAGGAGATGGAAGGCAATGACCGCTACGAGG...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp GTATGGGAAAATTCTATCTGCTCTTTCCGCTCCTTAAACAAAGTCCTAGGATACTTTCCGGGTGGACCCTaGTCCCTGACCGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: VWENSICSFRSLNKVLGYFPGGP*SLTGRG
Trigger: ACCGCGCCCGGTCAGGGAGCAGGGTCCACCCGGAAA...GTATCCTAGGACTTTGTTTAAGGAGCGGAAAGAGCAGATAGAATTTTCCCATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCCAATCCCATAGCCCTTaGTGTCCAGCAGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPQSHSP*CPAGPQ
Trigger: TTGGGGGCCTGCTGGACACCAAGGGCTATGGGATTG...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGTCGGTCACCATCTCCTaGCAGACGGACACCTCAGTT +
Preference number: 4 (lower is better)
Translates to: SCYFGERERPTGRRWVLVSVTIS*QTDTSV
Trigger: AACTGAGGTGTCCGTCTGCCAGGAGATGGTGACCGA...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGAGACGGAGGGTACATTaGCCCCTGACTAGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: PYTLVILARGKDPLGEDGRRRVH*PLTRGK
Trigger: TTTCCCCCTAGTCAGGGGCCAATGTACCCTCCGTCT...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ACGCACACGCGCGCACACATACACACACATACACTTGCACCCAGGTCTCACGTCCGGAAGCCAAGGCCATaGTATGGGAAAATTCTATCT +
Preference number: 4 (lower is better)
Translates to: THTRAHIHTHTLAPRSHVRKPRP*YGKILS
Trigger: AGATAGAATTTTCCCATACCATGGCCTTGGCTTCCG...GACGTGAGACCTGGGTGCAAGTGTATGTGTGTGTATGTGTGCGCGCGTGTGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCCGACTCAAGAGTTCCTaGTTCCCAGGCCCGTGTATT +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCARLKSS*FPGPCI
Trigger: AATACACGGGCCTGGGAACCAGGAACTCTTGAGTCG...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGTGGTGGAGGTGGAGGTaGTTGGTAGCGGCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: SCYFGERERPTGRRWVLVWWRWR*LVAAVC
Trigger: ACAAACAGCCGCTACCAACCACCTCCACCTCCACCA...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp ACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGTTCCATTCAAGGTGGTaGCAGCGGTGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TLYSCYFGERERPTGRRWFHSRW*QRWWRW
Trigger: CCACCTCCACCACCGCTGCCACCACCTTGAATGGAA...CCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCGCCGACCAACCCAAATaGCAAAAACATGAATTAAGC +
Preference number: 4 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGADQPK*QKHELS
Trigger: GCTTAATTCATGTTTTTGCCATTTGGGTTGGTCGGC...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGGAGGTTCAGGGTTGTaGATCTCTGGAACTGGAACT +
Preference number: 4 (lower is better)
Translates to: PPPYTLVILARGKDPLGEGGSGL*ISGTGT
Trigger: AGTTCCAGTTCCAGAGATTCACAACCCTGAACCTCC...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCGGAGGTTCAGGGTTGTaGATCTCTGGAACTGGAACT +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCAGGSGL*ISGTGT
Trigger: AGTTCCAGTTCCAGAGATTCACAACCCTGAACCTCC...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CAAGCAGCTGTAGAAAGCCTCGCCCCTCCCATCAGATGTGTGCTCTGGACTCTGAAGCATGGGATTGGTTaGAAATGGAAAATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: QAAVESLAPPIRCVLWTLKHGIG*KWKIPG
Trigger: TCCTGGGATTTTCCATTTTCAACCAATCCCATGCTT...CAGAGTCCAGAGCACACATCTGATGGGAGGGGCGAGGCTTTCTACAGCTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp CAAGCAGCTGTAGAAAGCCTCGCCCCTCCCATCAGATGTGTGCTCTGGACTCTGTTGCTTCTGAGTGTCTaGGAGTCCATAAAAACTCCA +
Preference number: 4 (lower is better)
Translates to: QAAVESLAPPIRCVLWTLLLLSV*ESIKTP
Trigger: TGGAGTTTTTATGGACTCTCAGACACTCAGAAGCAA...CAGAGTCCAGAGCACACATCTGATGGGAGGGGCGAGGCTTTCTACAGCTGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp CACGTTGTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACAGACAGATTAACCCTTaGCATTCCAGGCGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: HVVCEKHRMELQVGAEWHRQINP*HSRRFK
Trigger: CTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTCT...GTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGACAACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp AGAAAAGACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGTCAAGGAGTGCGGGCTaGAGGCGACCATCACGAGCC +
Preference number: 4 (lower is better)
Translates to: RKDRLTLDIPGVSRSEYRSRSAG*RRPSRA
Trigger: GGCTCGTGATGGTCGCCTGCAGCCCGCACTCCTTGA...CCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR GCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCGATGATCAGCGTGAATaGCCACCAGACGCCACTGAC +
Preference number: 4 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPDDQRE*PPDATD
Trigger: GTCAGTGGCGTCTGGTGGGCATTCACGCTGATCATC...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TCCGCCTCTGTGAACGGCACGTTCCACCGGAAGCCAAGGCCATGGTATGGGAAATGGGAAAATTCTATCTaGTCTTTCCGCTCCTTAAAC +
Preference number: 4 (lower is better)
Translates to: SASVNGTFHRKPRPWYGKWENSI*SFRSLN
Trigger: GTTTAAGGAGCGGAAAGAGCAGATAGAATTTTCCCA...TTTCCCATACCATGGCCTTGGCTTCCGGTGGAACGTGCCGTTCACAGAGGCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp TCTCAAAGTTTACTGCAATGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGGGACCTCGGAGGGGATaGGGTCCTCTCTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SQSLLQWTFETLHLILPKGPRRG*GPLWEA
Trigger: TGCCTCCCAGAGAGGACCCCATCCCCTCCGAGGTCC...CTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438375.2
CDS-3UTR CCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCTTCTATGAATCCTCATaGAGCCCCCTGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPFYESS*SPLLAW
Trigger: CCAGGCCAGCAGGGGGCTCCATGAGGATTCATAGAA...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGAGGGTTGTGAATCTCTaGAACTGGAACTTGACGAAC +
Preference number: 4 (lower is better)
Translates to: VCEKHRMELQVGAEWHHWRVVNL*NWNLTN
Trigger: GTTCGTCAAGTTCCAGTTCCAGAGATTCACAACCCT...CCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAAGAAAGCATGGGATTaGTTGAAAATGGAAAATCCC +
Preference number: 4 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSKKAWD*LKMENP
Trigger: GGGATTTTCCATTTTCAACCAATCCCATGCTTTCTT...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAATTGTGCCATATTCAATaGCGGTCTGGTCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PPPYTLVILARGKDPLGELCHIQ*RSGQPG
Trigger: ACCTGGCTGACCAGACCGCCATTGAATATGGCACAA...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGTGGAATTCAACACCCTaGCGATTCCCTCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SCYFGERERPTGRRWVLVWNSTP*RFPPLC
Trigger: GCACAGAGGAGGGAATCGCCAGGGTGTTGAATTCCA...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGCCTGCAGCTGGAGAATaGCCAGATCAAACTCGTCCC +
Preference number: 4 (lower is better)
Translates to: TLYSCYFGERERPTGRRWPAAGE*PDQTRP
Trigger: GGGACGAGTTTGATCTGGCCATTCTCCAGCTGCAGG...CCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCCCTGCAGCTGGAGAATaGCCAGATCAAACTCGTCCC +
Preference number: 4 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPPAAGE*PDQTRP
Trigger: GGGACGAGTTTGATCTGGCCATTCTCCAGCTGCAGG...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGGAGGGAAAGACCCACTaGGAGAAGATGGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PYTLVILARGKDPLGEDGEGKTH*EKMGPC
Trigger: ACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTC...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCGCAGAGTGGCACCATTaGGGTTTGTTGTCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPAEWHH*GLLSAG
Trigger: GCCAGCTGACAACAAACCCCAATGGTGCCACTCTGC...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp GACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGATGAGTGGGGCCACTTTGAAGTaGGGGACCTCCTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: DRLTLDIPGVSRSEYRMSGATLK*GTSFSP
Trigger: TGGAGAGAAGGAGGTCCCTCACTTCAAAGTGGCCCC...ACTCATCCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR TCA 90 bp TCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGGAGGCAGCCACTCATTTaGGTTTGGTTGAAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: SVRSIGWSCRLEQSGTIGRQPLI*VWLKRD
Trigger: ATCTCTTTTCAACCAAACTCAAATGAGTGGCTGCCT...CCCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCGACGGCAGCCCTAACTaGTTGTCCTGGCATAAAGAG +
Preference number: 4 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPDGSPN*LSWHKE
Trigger: CTCTTTATGCCAGGACAATCAGTTAGGGCTGCCGTC...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp GTATGGGAAAATTCTATCTGCTCTTTCCGCTCCTTAAACAAAGTCCTAGGATACTCAAGGAGTGCGGGCTaGAGGCGACCATCACGAGCC +
Preference number: 4 (lower is better)
Translates to: VWENSICSFRSLNKVLGYSRSAG*RRPSRA
Trigger: GGCTCGTGATGGTCGCCTGCAGCCCGCACTCCTTGA...GTATCCTAGGACTTTGTTTAAGGAGCGGAAAGAGCAGATAGAATTTTCCCATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR GCA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAATTGGAGATAAGGAATTaGCGGAGCAGCTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: PPPYTLVILARGKDPLGELEIRN*RSSFSR
Trigger: CCTAGAGAAGCTGCTCCGGCAATTCCTTATCTCCAA...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TTTCTGTTGAATAAATACACACACGCACACGCGCGCACACATACACACACATACCTCCGGTTCAGTTCCTaGACCGCAGTCACCACAGCA +
Preference number: 4 (lower is better)
Translates to: FLLNKYTHAHARTHTHTYLRFSS*TAVTTA
Trigger: TGCTGTGGTGACTGCGGTGCAGGAACTGAACCGGAG...GTATGTGTGTGTATGTGTGCGCGCGTGTGCGTGTGTGTATTTATTCAACAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp ACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGAATCGGAGGATCTCTaGCAGCTCCTTGAGCATGTC +
Preference number: 4 (lower is better)
Translates to: TLYSCYFGERERPTGRRWESEDL*QLLEHV
Trigger: GACATGCTCAAGGAGCTGGCAGAGATCCTCCGATTC...CCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGTGTAATGGTGAGGCCTaGCACAGCCAGATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SCYFGERERPTGRRWVLVCNGEA*HSQICF
Trigger: AAAGCAGATCTGGCTGTGGCAGGCCTCACCATTACA...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp ACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGAAACCAGAGGCTGTTaGCCAGGGAGTACTGGTTCA +
Preference number: 4 (lower is better)
Translates to: TLYSCYFGERERPTGRRWETRGC*PGSTGS
Trigger: TGAACCAGTACTCCCTGGGCAACAGCCTCTGGTTTC...CCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp GACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGATGAGTGGGAGGGCCGTCCTTTaGCCTTTGGGTGCAACGTTT +
Preference number: 4 (lower is better)
Translates to: DRLTLDIPGVSRSEYRMSGRAVL*PLGATF
Trigger: AAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCC...ACTCATCCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR GCA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAGGGAGGGCCGTCCTTTaGCCTTTGGGTGCAACGTTT +
Preference number: 4 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTGRAVL*PLGATF
Trigger: AAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCC...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGATGAGTCTGCCTTCAGGAGGATaGTGTGGGACATGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: DRLTLDIPGVSRSEYRMSLPSGG*CGTWRR
Trigger: ACGCCTCCATGTCCCACACCATCCTCCTGAAGGCAG...ACTCATCCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCCTCTGGGCAAACTCTTaGAAGAAAGCATGGGATTGG +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCALWANS*KKAWDW
Trigger: CCAATCCCATGCTTTCTTCCAAGAGTTTGCCCAGAG...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGATGAGTTCTGCCACGTGCCACTaGCCGATCTGCCGAAAACCA +
Preference number: 4 (lower is better)
Translates to: DRLTLDIPGVSRSEYRMSSATCH*PICRKP
Trigger: TGGTTTTCGGCAGATCGGCCAGTGGCACGTGGCAGA...ACTCATCCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACATCTGCCACGTGCCACTaGCCGATCTGCCGAAAACCA +
Preference number: 4 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTSATCH*PICRKP
Trigger: TGGTTTTCGGCAGATCGGCCAGTGGCACGTGGCAGA...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCGAGTGTCCGAGATGTTaGAGGCATAGAGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: WTFETLHLILPKTPSPVLECPRC*RHRGGC
Trigger: ACAGCCACCTCTATGCCTCCAACATCTCGGACACTC...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCCCTTCCATCTCCTGGTaGTTCCCCTTCAGCATTAAA +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCAPSISW*FPFSIK
Trigger: TTTAATGCTGAAGGGGAACCACCAGGAGATGGAAGG...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGTTGCCTTCCATCTCCTaGTGGTTCCCCTTCAGCATT +
Preference number: 4 (lower is better)
Translates to: SCYFGERERPTGRRWVLVLPSIS*WFPFSI
Trigger: AATGCTGAAGGGGAACCACCAGGAGATGGAAGGCAA...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ACGCACACGCGCGCACACATACACACACATACACTTGCACCCAGGTCTCACGTCTCCCAGAGTCATGAATaGCTTAGAGAAATCAATCAC +
Preference number: 4 (lower is better)
Translates to: THTRAHIHTHTLAPRSHVSQSHE*LREINH
Trigger: GTGATTGATTTCTCTAAGCCATTCATGACTCTGGGA...GACGTGAGACCTGGGTGCAAGTGTATGTGTGTGTATGTGTGCGCGCGTGTGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp ACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGTGGAATTCAACACCCTaGCGATTCCCTCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: TLYSCYFGERERPTGRRWWNSTP*RFPPLC
Trigger: GCACAGAGGAGGGAATCGCCAGGGTGTTGAATTCCA...CCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGATGAGTCCGTCCTTTGCCCTTTaGGTGCAACGTTTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: DRLTLDIPGVSRSEYRMSPSFAL*VQRFRV
Trigger: CACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGG...ACTCATCCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAATTCCACCAATTCATTaGACTGGTCTGGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: PPPYTLVILARGKDPLGEIPPIH*TGLGRD
Trigger: GTCCCTACCCAGACCAGTCCAATGAATTGGTGGAAT...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCGTATGTGTAATAGGCTaGCACCATCCCAAGTTCGGC +
Preference number: 4 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPVCVIG*HHPKFG
Trigger: GCCGAACTTGGGATGGTGTCAGCCTATTACACATAC...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGTCCATTCTCTGGAGTaGGAACTCCAGATTAGTGAA +
Preference number: 4 (lower is better)
Translates to: PPPYTLVILARGKDPLGEVHSLE*ELQISE
Trigger: TTCACTAATCTGGAGTTCTCACTCCAGAGAATGGAC...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCCTGACACATGGTTTCTaGAGTCTCGTACTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: WTFETLHLILPKTPSPVLLTHGF*SLVLAV
Trigger: GACAGCGAGTACGAGACTGCAGAAACCATGTGTCAG...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp GACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGATGAGTCCAGTGAAGGGCACATaGTCACAGTTCTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: DRLTLDIPGVSRSEYRMSPVKGT*SQFSCQ
Trigger: CTGGCAGGAGAACTGTGACCATGTGCCCTTCACTGG...ACTCATCCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACACCAGTGAAGGGCACATaGTCACAGTTCTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTPVKGT*SQFSCQ
Trigger: CTGGCAGGAGAACTGTGACCATGTGCCCTTCACTGG...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACATTCACGCCGATCTCTTaGCTCCGGTTCAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTFTPIS*LRFSSC
Trigger: GCAGGAACTGAACCGGAGCCAAGAGATCGGCGTGAA...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TCTCAAAGTTTACTGCAATGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACCATACCAACGGGGTaGCCCAGTCCTTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: SQSLLQWTFETLHLILPKTIPTG*PSPSAS
Trigger: AGAGGCGGAAGGACTGGGCCACCCCGTTGGTATGGT...CTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACACAATTCCATTCAAGGTaGTGGCAGCGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTQFHSR*WQRWWR
Trigger: CCTCCACCACCGCTGCCACCACCTTGAATGGAATTG...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp ACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGTTGGAGATAAGGAATTaGCGGAGCAGCTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: TLYSCYFGERERPTGRRWLEIRN*RSSFSR
Trigger: CCTAGAGAAGCTGCTCCGGCAATTCCTTATCTCCAA...CCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGACATGTAATTCCACATaGGTTGGTAGGTCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: PYTLVILARGKDPLGEDGTCNST*VGRSGS
Trigger: GCTACCAGACCTACCAACGCATGTGGAATTACATGT...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp AGAAAAGACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGTTCTCCTGCCAGGACTaGTTGAGGCTCTGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: RKDRLTLDIPGVSRSEYRFSCQD*LRLWAN
Trigger: GTTTGCCCAGAGCCTCAACCAGTCCTGGCAGGAGAA...CCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp TCTCAAAGTTTACTGCAATGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGGCTCGCTGCTGTTGGTaGTTTTCTCCCACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SQSLLQWTFETLHLILPKARCCW*FSPTPG
Trigger: GCCTGGAGTGGGAGAAAACCACCAACAGCAGCGAGC...CTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp TCTCAAAGTTTACTGCAATGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGCGGGCTCGCTGCTGTTaGTGGTTTTCTCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: SQSLLQWTFETLHLILPKRARCC*WFSPTP
Trigger: TGGAGTGGGAGAAAACCACCAACAGCAGCGAGCCCG...CTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAGAGGGAAAGACCCACTaGGAGAAGATGGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTEGKTH*EKMGPC
Trigger: ACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTC...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAGTATGTGTAATAGGCTaGCACCATCCCAAGTTCGGC +
Preference number: 4 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTVCVIG*HHPKFG
Trigger: GCCGAACTTGGGATGGTGTCAGCCTATTACACATAC...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp ACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCATTCTCTGGAGTaGGAACTCCAGATTAGTGAA +
Preference number: 4 (lower is better)
Translates to: TLYSCYFGERERPTGRRWVHSLE*ELQISE
Trigger: TTCACTAATCTGGAGTTCTCACTCCAGAGAATGGAC...CCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp TCTCAAAGTTTACTGCAATGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGGGAAGAGGACACAGCTaGCGGCCAGATAGGCTAGAA +
Preference number: 4 (lower is better)
Translates to: SQSLLQWTFETLHLILPKGRGHS*RPDRLE
Trigger: TTCTAGCCTATCTGGCCGTCAGCTGTGTCCTCTTCC...CTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR TCA 90 bp AGAAAAGACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGAGCCAGGTCATCCACTaGCTCAATGGGCACATCCAT +
Preference number: 4 (lower is better)
Translates to: RKDRLTLDIPGVSRSEYRSQVIH*LNGHIH
Trigger: ATGGATGTGCCCATTGAGTCAGTGGATGACCTGGCT...CCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR TCA 90 bp CAGAAACCGTCTAGTGCTGGCAGTCTTATCTTGATTCCACACGGAGAAAGAAACATGCTGGAGCCTCCGTaGATTGTGCCATATTCAATG +
Preference number: 4 (lower is better)
Translates to: QKPSSAGSLILIPHGERNMLEPP*IVPYSM
Trigger: CATTGAATATGGCACAATTCACGGAGGCTCCAGCAT...GTTTCTTTCTCCGTGTGGAATCAAGATAAGACTGCCAGCACTAGACGGTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp AGAAAAGACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGGGGTACATTGGCCCCTaGCTAGGGGGAAATTCAACT +
Preference number: 4 (lower is better)
Translates to: RKDRLTLDIPGVSRSEYRGYIGP*LGGNST
Trigger: AGTTGAATTTCCCCCTAGTCAGGGGCCAATGTACCC...CCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTCTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR TCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCAGACAGATTAACCCTTaGCATTCCAGGCGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPRQINP*HSRRFK
Trigger: CTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTCT...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR TCA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCTTTTCCATCAGCCAATaGGAACTCTGCGTGAAACTC +
Preference number: 4 (lower is better)
Translates to: WTFETLHLILPKTPSPVLFSISQ*ELCVKL
Trigger: GAGTTTCACGCAGAGTTCTCATTGGCTGATGGAAAA...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR TCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCCTGGCAGTCTTATCTTaGTTCCACACGGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPLAVLS*FHTEKE
Trigger: TTCTTTCTCCGTGTGGAATCAAGATAAGACTGCCAG...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACATGTAATGGTGAGGCCTaGCACAGCCAGATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTCNGEA*HSQICF
Trigger: AAAGCAGATCTGGCTGTGGCAGGCCTCACCATTACA...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR GCA 90 bp AGAAAAGACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGGAAACCAGAGGCTGTTaGCCAGGGAGTACTGGTTCA +
Preference number: 4 (lower is better)
Translates to: RKDRLTLDIPGVSRSEYRETRGC*PGSTGS
Trigger: TGAACCAGTACTCCCTGGGCAACAGCCTCTGGTTTC...CCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR GCA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAATGGGAAAATTCTATCTaGTCTTTCCGCTCCTTAAAC +
Preference number: 4 (lower is better)
Translates to: PPPYTLVILARGKDPLGEWENSI*SFRSLN
Trigger: GTTTAAGGAGCGGAAAGAGCAGATAGAATTTTCCCA...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCAGGGTTGTGAATCTCTaGAACTGGAACTTGACGAAC +
Preference number: 4 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPRVVNL*NWNLTN
Trigger: GTTCGTCAAGTTCCAGTTCCAGAGATTCACAACCCT...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp GACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGATGAGTTCAGTGTTGCTGGGGTaGAGGTTCAGGGTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: DRLTLDIPGVSRSEYRMSSVLLG*RFRVVN
Trigger: ATTCACAACCCTGAACCTCCACCCCAGCAACACTGA...ACTCATCCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp GACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGATGAGTGACGCCCGGAGAAAATaGGTCCAGGAAGGAGAAATA +
Preference number: 4 (lower is better)
Translates to: DRLTLDIPGVSRSEYRMSDARRK*VQEGEI
Trigger: TATTTCTCCTTCCTGGACCCATTTTCTCCGGGCGTC...ACTCATCCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp GACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGATGAGTTATTCAATGGCGGTCTaGTCAGCCAGGTCATCCACT +
Preference number: 4 (lower is better)
Translates to: DRLTLDIPGVSRSEYRMSYSMAV*SARSST
Trigger: AGTGGATGACCTGGCTGACCAGACCGCCATTGAATA...ACTCATCCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp GACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGATGAGTACTGGATCCGAAATCTaGAGAGGTGTCGACGCTGTA +
Preference number: 4 (lower is better)
Translates to: DRLTLDIPGVSRSEYRMSTGSEI*RGVDAV
Trigger: TACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT...ACTCATCCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGATACTCTTGTTATTTTaGCGAGAGGGAAAGACCCAC +
Preference number: 4 (lower is better)
Translates to: SCYFGERERPTGRRWVLVILLLF*REGKTH
Trigger: GTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTAT...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCAAGCATGGGATTGGTTaGAAATGGAAAATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPKHGIG*KWKIPG
Trigger: TCCTGGGATTTTCCATTTTCAACCAATCCCATGCTT...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAATGCTGGAGCCTCCGTaGATTGTGCCATATTCAATG +
Preference number: 4 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTMLEPP*IVPYSM
Trigger: CATTGAATATGGCACAATTCACGGAGGCTCCAGCAT...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR TCA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCACTGCAATGGACTTTTaGGACTCTCCATCTGATTCT +
Preference number: 4 (lower is better)
Translates to: WTFETLHLILPKTPSPVLTAMDF*DSPSDS
Trigger: AGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGT...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR TCA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCACTGCAATGGACTTTTaGGACTCTCCATCTGATTCT +
Preference number: 4 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPTAMDF*DSPSDS
Trigger: AGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGT...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR TCA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGGGTCTGAGTATAGGATaGGTTAATTGCTTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: PYTLVILARGKDPLGEDGGLSIG*VNCFLA
Trigger: TGCCAAAAAGCAATTAACTCATCCTATACTCAGACC...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR TCA 90 bp GTTCCACCGGAAGCCAAGGCCATGGTATGGGAAAATTCTATCTGCTCTTTCCGCTTAAGGTCTTTCTGTTaGATAAATACACACACGCAC +
Preference number: 4 (lower is better)
Translates to: VPPEAKAMVWENSICSFRLRSFC*INTHTH
Trigger: GTGCGTGTGTGTATTTATTCAACAGAAAGACCTTAA...GCGGAAAGAGCAGATAGAATTTTCCCATACCATGGCCTTGGCTTCCGGTGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp CAGAAACCGTCTAGTGCTGGCAGTCTTATCTTGATTCCACACGGAGAAAGAAACACATGTAATTCCACATaGGTTGGTAGGTCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: QKPSSAGSLILIPHGERNTCNST*VGRSGS
Trigger: GCTACCAGACCTACCAACGCATGTGGAATTACATGT...GTTTCTTTCTCCGTGTGGAATCAAGATAAGACTGCCAGCACTAGACGGTTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR GCA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAACACACACATACACTTaGACCCAGGTCTCACGTCTA +
Preference number: 4 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTTHTYT*TQVSRL
Trigger: TAGACGTGAGACCTGGGTGCAAGTGTATGTGTGTGT...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp TTTCTGTTGAATAAATACACACACGCACACGCGCGCACACATACACACACATACGGAGGATCTGACACATaGTTTCTGCAGTCTCGTACT +
Preference number: 4 (lower is better)
Translates to: FLLNKYTHAHARTHTHTYGGSDT*FLQSRT
Trigger: AGTACGAGACTGCAGAAACCATGTGTCAGATCCTCC...GTATGTGTGTGTATGTGTGCGCGCGTGTGCGTGTGTGTATTTATTCAACAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp TCTCAAAGTTTACTGCAATGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGCTTGACGAACTCCTCTaGGGCCACTTTGAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SQSLLQWTFETLHLILPKLDELL*GHFEVR
Trigger: CCTCACTTCAAAGTGGCCCCAGAGGAGTTCGTCAAG...CTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGTCCCAGAGTCATGAATaGCTTAGAGAAATCAATCAC +
Preference number: 4 (lower is better)
Translates to: SCYFGERERPTGRRWVLVSQSHE*LREINH
Trigger: GTGATTGATTTCTCTAAGCCATTCATGACTCTGGGA...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp AGAAAAGACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGACTGGATCCGAAATCTaGAGAGGTGTCGACGCTGTA +
Preference number: 4 (lower is better)
Translates to: RKDRLTLDIPGVSRSEYRTGSEI*RGVDAV
Trigger: TACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT...CCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp TCTCAAAGTTTACTGCAATGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGGAGGGAAAGACCCACTaGGAGAAGATGGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SQSLLQWTFETLHLILPKEGKTH*EKMGPC
Trigger: ACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTC...CTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp ACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGATACTCTTGTTATTTTaGCGAGAGGGAAAGACCCAC +
Preference number: 4 (lower is better)
Translates to: TLYSCYFGERERPTGRRWILLLF*REGKTH
Trigger: GTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTAT...CCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCCAAAGTTTACTGCAATaGACTTTTGAGACTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LLFWREGKTHWEKMGPCAQSLLQ*TFETLH
Trigger: ATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTG...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR TCA 90 bp TCTCAAAGTTTACTGCAATGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGGGAGGTTCAGGGTTGTaGATCTCTGGAACTGGAACT +
Preference number: 4 (lower is better)
Translates to: SQSLLQWTFETLHLILPKGGSGL*ISGTGT
Trigger: AGTTCCAGTTCCAGAGATTCACAACCCTGAACCTCC...CTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR TCA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCGGTCTGAGTATAGGATaGGTTAATTGCTTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: WTFETLHLILPKTPSPVLGLSIG*VNCFLA
Trigger: TGCCAAAAAGCAATTAACTCATCCTATACTCAGACC...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR GCA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAGCACCTGAAATCGGATaGACTGGTAACGCAATATTC +
Preference number: 4 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTAPEIG*TGNAIF
Trigger: GAATATTGCGTTACCAGTGCATCCGATTTCAGGTGC...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR GCA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGCATCTCAAAGTTTACTaGAATGGACTTTTGAGACTC +
Preference number: 4 (lower is better)
Translates to: PYTLVILARGKDPLGEDGHLKVY*NGLLRL
Trigger: GAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGATG...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGGCTGTCCATTCTCTaGAGTGAGAACTCCAGATTA +
Preference number: 4 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTRLSIL*SENSRL
Trigger: TAATCTGGAGTTCTCACTCCAGAGAATGGACAGCCT...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CCA 90 bp TCTCAAAGTTTACTGCAATGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGTTGTGCCATATTCAATaGCGGTCTGGTCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SQSLLQWTFETLHLILPKLCHIQ*RSGQPG
Trigger: ACCTGGCTGACCAGACCGCCATTGAATATGGCACAA...CTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR TCA 90 bp GTATGGGAAAATTCTATCTGCTCTTTCCGCTCCTTAAACAAAGTCCTAGGATACAAAATCCCAGGATGTTaGCACGATCATCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: VWENSICSFRSLNKVLGYKIPGC*HDHPQG
Trigger: GCCTTGTGGATGATCGTGTCAACATCCTGGGATTTT...GTATCCTAGGACTTTGTTTAAGGAGCGGAAAGAGCAGATAGAATTTTCCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR GCA 90 bp TCTCAAAGTTTACTGCAATGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGAGCCTCCGTGAATTGTaGCATATTCAATGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: SQSLLQWTFETLHLILPKSLREL*HIQWRS
Trigger: AGACCGCCATTGAATATGGCACAATTCACGGAGGCT...CTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR GCA 90 bp ACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGCATCTCAAAGTTTACTaGAATGGACTTTTGAGACTC +
Preference number: 4 (lower is better)
Translates to: TLYSCYFGERERPTGRRWHLKVY*NGLLRL
Trigger: GAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGATG...CCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR GCA 90 bp CAGAAACCGTCTAGTGCTGGCAGTCTTATCTTGATTCCACACGGAGAAAGAAACAAGACACAAGTGTCTTaGACAGCTTGTTGTCATTTG +
Preference number: 4 (lower is better)
Translates to: QKPSSAGSLILIPHGERNKTQVS*TACCHL
Trigger: CAAATGACAACAAGCTGTGCAAGACACTTGTGTCTT...GTTTCTTTCTCCGTGTGGAATCAAGATAAGACTGCCAGCACTAGACGGTTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp TCTCAAAGTTTACTGCAATGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGATTCCACCAATTCATTaGACTGGTCTGGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: SQSLLQWTFETLHLILPKIPPIH*TGLGRD
Trigger: GTCCCTACCCAGACCAGTCCAATGAATTGGTGGAAT...CTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR TCA 90 bp CAGAAACCGTCTAGTGCTGGCAGTCTTATCTTGATTCCACACGGAGAAAGAAACCAAATGGCAAAAACATaGATTAAGCTCGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: QKPSSAGSLILIPHGERNQMAKT*IKLVIF
Trigger: GAAGATGACGAGCTTAATTCATGTTTTTGCCATTTG...GTTTCTTTCTCCGTGTGGAATCAAGATAAGACTGCCAGCACTAGACGGTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp CAGAAACCGTCTAGTGCTGGCAGTCTTATCTTGATTCCACACGGAGAAAGAAACAAGAAAGCATGGGATTaGTTGAAAATGGAAAATCCC +
Preference number: 4 (lower is better)
Translates to: QKPSSAGSLILIPHGERNKKAWD*LKMENP
Trigger: GGGATTTTCCATTTTCAACCAATCCCATGCTTTCTT...GTTTCTTTCTCCGTGTGGAATCAAGATAAGACTGCCAGCACTAGACGGTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp AGAAAAGACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGATACTCTTGTTATTTTaGCGAGAGGGAAAGACCCAC +
Preference number: 4 (lower is better)
Translates to: RKDRLTLDIPGVSRSEYRILLLF*REGKTH
Trigger: GTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTAT...CCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR TCA 90 bp GACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGATGAGTTCATTTGAGTTTGGTTaGAAAGAGATGCAGTTGACA +
Preference number: 4 (lower is better)
Translates to: DRLTLDIPGVSRSEYRMSSFEFG*KEMQLT
Trigger: TGTCAACTGCATCTCTTTTCAACCAAACTCAAATGA...ACTCATCCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CCA 90 bp AGAAAAGACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGCAAAGTTTACTGCAATaGACTTTTGAGACTCTCCAT +
Preference number: 4 (lower is better)
Translates to: RKDRLTLDIPGVSRSEYRQSLLQ*TFETLH
Trigger: ATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTG...CCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTCTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CCA 90 bp GTATGGGAAAATTCTATCTGCTCTTTCCGCTCCTTAAACAAAGTCCTAGGATACAAGAAAGCATGGGATTaGTTGAAAATGGAAAATCCC +
Preference number: 4 (lower is better)
Translates to: VWENSICSFRSLNKVLGYKKAWD*LKMENP
Trigger: GGGATTTTCCATTTTCAACCAATCCCATGCTTTCTT...GTATCCTAGGACTTTGTTTAAGGAGCGGAAAGAGCAGATAGAATTTTCCCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS CCA 90 bp AGGCTCTCCTCGCTGCGGGCGGGCGACGGCCGTGCCCGCAGGCCCTaGAAGCGGCGGCACTCGGGGCAGACGCGGATGTGCGTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: RLSSLRAGDGRARRP*KRRHSGQTRMCVQP
Trigger: CGGCTGCACGCACATCCGCGTCTGCCCCGAGTGCCGCCGCTTCCAGGGCCTGCGGGCACGGCCGTCGCCCGCCCGCAGCGAGGAGAGCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS GCA 90 bp GGCGGCCTCCTGCGCCAGTCTCTGCGCGAGCTGGTCGGGCTCCCCTaGCCCGCACAGCTTCCCGTTGCTGAGCGTCGCCGTGCCCCGCGG +
Preference number: 5 (lower is better)
Translates to: GGLLRQSLRELVGLP*PAQLPVAERRRAPR
Trigger: CCGCGGGGCACGGCGACGCTCAGCAACGGGAAGCTGTGCGGGGCAGGGGAGCCCGACCAGCTCGCGCAGAGACTGGCGCAGGAGGCCGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS GCA 90 bp TTAGTATTCCCGCCGCGGGCGCTGCCCTCGCGGCGTCGGCACCGATaGCCGGCCACCTCCAGGCCCGAACGACTGCGGCTGCGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: LVFPPRALPSRRRHR*PATSRPERLRLREG
Trigger: GCCTTCCCGCAGCCGCAGTCGTTCGGGCCTGGAGGTGGCCGGGCATCGGTGCCGACGCCGCGAGGGCAGCGCCCGCGGCGGGAATACTAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000533291.5
CDS GCA 90 bp TTTCTCCCACTCCAGGCTCTCCTCGCTGCGGGCGGGCGACGGCCGTaGCCGCAGGCCCTGGAAGCGGCGGCACTCGGGGCAGACGCGGAT +
Preference number: 5 (lower is better)
Translates to: FLPLQALLAAGGRRP*PQALEAAALGADAD
Trigger: ATCCGCGTCTGCCCCGAGTGCCGCCGCTTCCAGGGCCTGCGGGCACGGCCGTCGCCCGCCCGCAGCGAGGAGAGCCTGGAGTGGGAGAAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCCCGTCCAGGTGCCGTaGGCCTCGGGAACGCCGTAC +
Preference number: 5 (lower is better)
Translates to: VSTLYKFRLAADSSARPAPVQVP*ASGTPY
Trigger: GTACGGCGTTCCCGAGGCCAACGGCACCTGGACGGG...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCCCCGTCCAGGTGCCGTaGGCCTCGGGAACGCCGTAC +
Preference number: 5 (lower is better)
Translates to: EVSTLYKFRLAADSSARPPVQVP*ASGTPY
Trigger: GTACGGCGTTCCCGAGGCCAACGGCACCTGGACGGG...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
71% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS CCA 90 bp AGAGGCCGGGAGCCGCCCGGACCTCGGAGGGGATGGGGTCCTCTCTaGGAGGCACCCGTCTCCTTCCTGGGTCCTAAGACCCTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: RGREPPGPRRGWGPL*EAPVSFLGPKTLPS
Trigger: GCTGGGAAGGGTCTTAGGACCCAGGAAGGAGACGGGTGCCTCCCAGAGAGGACCCCATCCCCTCCGAGGTCCGGGCGGCTCCCGGCCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438375.2
CDS CCA 90 bp GCGCGTCCTGTGGCCTCCGGGACTACTCGGGCTCGCTGCTGTTGGTaGTTTTCTCCCACTCCAGGCTCTCCTCGCTGCGGGCGGGCGACG +
Preference number: 5 (lower is better)
Translates to: ARPVASGTTRARCCW*FSPTPGSPRCGRAT
Trigger: CGTCGCCCGCCCGCAGCGAGGAGAGCCTGGAGTGGGAGAAAACCACCAACAGCAGCGAGCCCGAGTAGTCCCGGAGGCCACAGGACGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCGGAGAAGATGGGTCCTaGTGCCCAGGAGGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: CRRCTSSGWRLTAAPAPPGEDGS*CPGGRA
Trigger: GGCCCTCCCTCCTGGGCACAAGGACCCATCTTCTCC...GGGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS GCA 90 bp GGGCATGACATAACTCTGCTGCGGCGGCGGCCGTGCCCTTTAGGGTaGATTAGTATTCCCGCCGCGGGCGCTGCCCTCGCGGCGTCGGCA +
Preference number: 5 (lower is better)
Translates to: GHDITLLRRRPCPLG*ISIPAAGAALAASA
Trigger: TGCCGACGCCGCGAGGGCAGCGCCCGCGGCGGGAATACTAATGCACCCTAAAGGGCACGGCCGCCGCCGCAGCAGAGTTATGTCATGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438375.2
CDS CCA 90 bp TCTGCGCGTCCTGTGGCCTCCGGGACTACTCGGGCTCGCTGCTGTTaGTGGTTTTCTCCCACTCCAGGCTCTCCTCGCTGCGGGCGGGCG +
Preference number: 5 (lower is better)
Translates to: SARPVASGTTRARCC*WFSPTPGSPRCGRA
Trigger: CGCCCGCCCGCAGCGAGGAGAGCCTGGAGTGGGAGAAAACCACCAACAGCAGCGAGCCCGAGTAGTCCCGGAGGCCACAGGACGCGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CCCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCCGCACAGCTTCCCGTaGCTGAGCGTCGCCGTGCCC +
Preference number: 5 (lower is better)
Translates to: PRREGRPLPFGCNVSGWTPHSFP*LSVAVP
Trigger: GGGCACGGCGACGCTCAGCAACGGGAAGCTGTGCGG...GGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGGAGAAGATGGGTCCTaGTGCCCAGGAGGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: EVSTLYKFRLAADSSARPGEDGS*CPGGRA
Trigger: GGCCCTCCCTCCTGGGCACAAGGACCCATCTTCTCC...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCGCGGGGCTGCTGTaGGCCGTTTTTCCTCTTCCG +
Preference number: 5 (lower is better)
Translates to: EVSTLYKFRLAADSSARPAAGLL*AVFPLP
Trigger: CGGAAGAGGAAAAACGGCCAACAGCAGCCCCGCGGC...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527524.8
ENST00000638419.1
CDS GCA 90 bp CTCAGAAAGTATCTGCTGCTGCGGCGGCGGCCGTGCCCTTTAGGGTaGATTAGTATTCCCGCCGCGGGCGCTGCCCTCGCGGCGTCGGCA +
Preference number: 5 (lower is better)
Translates to: LRKYLLLRRRPCPLG*ISIPAAGAALAASA
Trigger: TGCCGACGCCGCGAGGGCAGCGCCCGCGGCGGGAATACTAATGCACCCTAAAGGGCACGGCCGCCGCCGCAGCAGCAGATACTTTCTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533291.5
CDS-3UTR CAA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCACTTCGACCTTGGCCTaGCCCAGCCTCTCAGGAGCG +
Preference number: 5 (lower is better)
Translates to: EVSTLYKFRLAADSSARPTSTLA*PSLSGA
Trigger: CGCTCCTGAGAGGCTGGGCAAGGCCAAGGTCGAAGT...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTCGTCCCGGATCTCCTaGAGGAGCGGGGTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPSSRIS*RSGVGS
Trigger: GGACCCCACCCCGCTCCTCAAGGAGATCCGGGACGA...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCAGGGAGGGCCGTCCTTaGCCCTTTGGGTGCAACGTT +
Preference number: 5 (lower is better)
Translates to: CRRCTSSGWRLTAAPAPPREGRP*PFGCNV
Trigger: AACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCT...GGGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCACGCTGATGTCAGTGTaGCTGGGGTGGAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: VSTLYKFRLAADSSARPATLMSV*LGWRFR
Trigger: CCTGAACCTCCACCCCAGCAACACTGACATCAGCGT...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCTCCTGCCAGGACTGGTaGAGGCTCTGGGCAAACTCT +
Preference number: 5 (lower is better)
Translates to: VSTLYKFRLAADSSARPASCQDW*RLWANS
Trigger: AGAGTTTGCCCAGAGCCTCAACCAGTCCTGGCAGGA...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp GAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCTGGTTCACCAGGAGGTaGCACCGGCCCTGGGCACAT +
Preference number: 5 (lower is better)
Translates to: ERCRRCTSSGWRLTAAPAWFTRR*HRPWAH
Trigger: ATGTGCCCAGGGCCGGTGCAACCTCCTGGTGAACCA...GGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCGTCCTTTGCCCTTaGGGTGCAACGTTTCCGGGT +
Preference number: 5 (lower is better)
Translates to: EVSTLYKFRLAADSSARPAVLCP*GATFPG
Trigger: ACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGC...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS CCA 90 bp CCGAGACGCGGGGCATCTTCTATGAATCCTCATGGAGCCCCCTGCTaGCCTGGGCATGACATAACTCTGCTGCGGCGGCGGCCGTGCCCT +
Preference number: 5 (lower is better)
Translates to: PRRGASSMNPHGAPC*PGHDITLLRRRPCP
Trigger: AGGGCACGGCCGCCGCCGCAGCAGAGTTATGTCATGCCCAGGCCAGCAGGGGGCTCCATGAGGATTCATAGAAGATGCCCCGCGTCTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438375.2
CDS-3UTR CAA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCTCCTGCCAGGACTGGTaGAGGCTCTGGGCAAACTCT +
Preference number: 5 (lower is better)
Translates to: EVSTLYKFRLAADSSARPSCQDW*RLWANS
Trigger: AGAGTTTGCCCAGAGCCTCAACCAGTCCTGGCAGGA...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCACGACCAGGGTGGTGTaGAAGAGAGTGTCCGAGATG +
Preference number: 5 (lower is better)
Translates to: CRRCTSSGWRLTAAPAPPTTRVV*KRVSEM
Trigger: CATCTCGGACACTCTCTTCAACACCACCCTGGTCGT...GGGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGGGAGAAGATGGGTCCTaGTGCCCAGGAGGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRGEDGS*CPGGRA
Trigger: GGCCCTCCCTCCTGGGCACAAGGACCCATCTTCTCC...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp GAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCTCTGGAACTGGAACTaGACGAACTCCTCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: ERCRRCTSSGWRLTAAPALWNWN*TNSSGA
Trigger: GGCCCCAGAGGAGTTCGTCAAGTTCCAGTTCCAGAG...GGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCTGGTTCACCAGGAGGTaGCACCGGCCCTGGGCACAT +
Preference number: 5 (lower is better)
Translates to: SGEVSTLYKFRLAADSSAWFTRR*HRPWAH
Trigger: ATGTGCCCAGGGCCGGTGCAACCTCCTGGTGAACCA...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCGTAATTCCACATGCGTaGGTAGGTCTGGTAGCGGGA +
Preference number: 5 (lower is better)
Translates to: VSTLYKFRLAADSSARPAVIPHA*VGLVAG
Trigger: TCCCGCTACCAGACCTACCAACGCATGTGGAATTAC...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTCGGTTGATGCGGTTCTaGGCCAGGGTGATGGAGAGC +
Preference number: 5 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPRLMRF*ARVMES
Trigger: GCTCTCCATCACCCTGGCCAAGAACCGCATCAACCG...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTCCTGCCAGGACTGGTaGAGGCTCTGGGCAAACTCT +
Preference number: 5 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPSCQDW*RLWANS
Trigger: AGAGTTTGCCCAGAGCCTCAACCAGTCCTGGCAGGA...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCCTTCACGCCGATCTCTaGGCTCCGGTTCAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPLHADL*APVQFL
Trigger: CAGGAACTGAACCGGAGCCAAGAGATCGGCGTGAAG...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCTGGTAGCGGGAATTTaGGAAGAAGGTCATGCTGGA +
Preference number: 5 (lower is better)
Translates to: VSTLYKFRLAADSSARPALVAGI*EEGHAG
Trigger: TCCAGCATGACCTTCTTCCAAAATTCCCGCTACCAG...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp GTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCGCCCCCCACCCTATACTCTaGTTATTTTGGCGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: VSTLYKFRLAADSSARPAPHPIL*LFWREG
Trigger: TCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGG...GGCGGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACAC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCCTCTCAGGAGCGCGGTaGATGCGGTTCTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSLSGAR*MRFLAR
Trigger: CCTGGCCAAGAACCGCATCAACCGCGCTCCTGAGAG...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGATGTCCACTTCGACCTaGGCCTTGCCCAGCCTCTCA +
Preference number: 5 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRMSTST*ALPSLS
Trigger: TGAGAGGCTGGGCAAGGCCAAGGTCGAAGTGGACAT...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCACGGACAGCGTGTCCTaGGAGATAAGGAATTGCCGG +
Preference number: 5 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPTDSVS*EIRNCR
Trigger: CCGGCAATTCCTTATCTCCAAGGACACGCTGTCCGT...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCACGACCAGGGTGGTGTaGAAGAGAGTGTCCGAGATG +
Preference number: 5 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPTTRVV*KRVSEM
Trigger: CATCTCGGACACTCTCTTCAACACCACCCTGGTCGT...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCTGGTTCACCAGGAGGTaGCACCGGCCCTGGGCACAT +
Preference number: 5 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSWFTRR*HRPWAH
Trigger: ATGTGCCCAGGGCCGGTGCAACCTCCTGGTGAACCA...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGGGAAACCAGAGGCTGTaGCCCAGGGAGTACTGGTTC +
Preference number: 5 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRGNQRL*PREYWF
Trigger: GAACCAGTACTCCCTGGGCAACAGCCTCTGGTTTCC...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCGGAAACCAGAGGCTGTaGCCCAGGGAGTACTGGTTC +
Preference number: 5 (lower is better)
Translates to: SGEVSTLYKFRLAADSSAGNQRL*PREYWF
Trigger: GAACCAGTACTCCCTGGGCAACAGCCTCTGGTTTCC...GGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCCCCCACCCTATACTCTaGTTATTTTGGCGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: EVSTLYKFRLAADSSARPPHPIL*LFWREG
Trigger: TCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGG...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
62% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCGCCGCGGGGCTGCTGTaGGCCGTTTTTCCTCTTCCG +
Preference number: 5 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGAAGLL*AVFPLP
Trigger: CGGAAGAGGAAAAACGGCCAACAGCAGCCCCGCGGC...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGGATGGAGCTGCAGGTaGGAGCAGAGTGGCACCATT +
Preference number: 5 (lower is better)
Translates to: QEGGPSFALWVQRFRVDPGWSCR*EQSGTI
Trigger: AATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCC...AGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCGTAATTCCACATGCGTaGGTAGGTCTGGTAGCGGGA +
Preference number: 5 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPVIPHA*VGLVAG
Trigger: TCCCGCTACCAGACCTACCAACGCATGTGGAATTAC...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp GAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCAATCCATGATAGTCTaGGGGGTCTGGCTTCATAGG +
Preference number: 5 (lower is better)
Translates to: ERCRRCTSSGWRLTAAPAQSMIV*GVWLHR
Trigger: CCTATGAAGCCAGACCCCCAAGACTATCATGGATTG...GGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp GAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCCCACAGTAGGAACCACGTaGTCTGTGAGAAGCATAGGA +
Preference number: 5 (lower is better)
Translates to: EVSTLYKFRLAADSSARPTVGTT*SVRSIG
Trigger: TCCTATGCTTCTCACAGACAACGTGGTTCCTACTGT...GGGGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp GAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCAGCGCCCGCCGAAAATCCCAGGATGTaGACACGATCATCCACAAGG +
Preference number: 5 (lower is better)
Translates to: ERCRRCTSSGWRLTAAPAENPRM*TRSSTR
Trigger: CCTTGTGGATGATCGTGTCAACATCCTGGGATTTTC...GGCGGGCGCTGCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCCCCGTCCAGGTGCCGTaGGCCTCGGGAACGCCGTAC +
Preference number: 5 (lower is better)
Translates to: LLFWREGKTHWEKMGPCAPVQVP*ASGTPY
Trigger: GTACGGCGTTCCCGAGGCCAACGGCACCTGGACGGG...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAACCGCACAGCTTCCCGTaGCTGAGCGTCGCCGTGCCC +
Preference number: 5 (lower is better)
Translates to: PPPYTLVILARGKDPLGEPHSFP*LSVAVP
Trigger: GGGCACGGCGACGCTCAGCAACGGGAAGCTGTGCGG...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCAGGGAGGGCCGTCCTTaGCCCTTTGGGTGCAACGTT +
Preference number: 5 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGREGRP*PFGCNV
Trigger: AACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCT...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS TCA 90 bp AGAGAGTGTCCGAGATGTTGGAGGCATAGAGGTGGCTGTCCATGCTaGGGCCCTCTGCCACGTGCCACTGGCCGATCTGCCGAAAACCAT +
Preference number: 5 (lower is better)
Translates to: RECPRCWRHRGGCPC*GPLPRATGRSAENH
Trigger: ATGGTTTTCGGCAGATCGGCCAGTGGCACGTGGCAGAGGGCCTCAGCATGGACAGCCACCTCTATGCCTCCAACATCTCGGACACTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS-3UTR CAA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCCTCTGGAACTGGAACTaGACGAACTCCTCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGLWNWN*TNSSGA
Trigger: GGCCCCAGAGGAGTTCGTCAAGTTCCAGTTCCAGAG...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCCAGGCGGTGGTGCAGTaGAAGAAGTTCAGGATCCCA +
Preference number: 5 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSQAVVQ*KKFRIP
Trigger: TGGGATCCTGAACTTCTTCAACTGCACCACCGCCTG...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCACGGACAGCGTGTCCTaGGAGATAAGGAATTGCCGG +
Preference number: 5 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSTDSVS*EIRNCR
Trigger: CCGGCAATTCCTTATCTCCAAGGACACGCTGTCCGT...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTGCTCCCTGACCGGCTCTGGCCTTTGCTGTaGAATTCAATGTGGCCGGTA +
Preference number: 5 (lower is better)
Translates to: RPLPFGCNVSGWTLLPDRLWPLL*NSMWPV
Trigger: TACCGGCCACATTGAATTCAACAGCAAAGGCCAGAG...CCGGTCAGGGAGCAGGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS GCA 90 bp CGAGATGTTGGAGGCATAGAGGTGGCTGTCCATGCTGAGGCCCTCTaGCACGTGCCACTGGCCGATCTGCCGAAAACCATTCCTTGTGAA +
Preference number: 5 (lower is better)
Translates to: RDVGGIEVAVHAEAL*HVPLADLPKTIPCE
Trigger: TTCACAAGGAATGGTTTTCGGCAGATCGGCCAGTGGCACGTGGCAGAGGGCCTCAGCATGGACAGCCACCTCTATGCCTCCAACATCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS-3UTR CAA 90 bp CACGTTGTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCGGTTGATGCGGTTCTaGGCCAGGGTGATGGAGAGC +
Preference number: 5 (lower is better)
Translates to: HVVCEKHRMELQVGAEWHRLMRF*ARVMES
Trigger: GCTCTCCATCACCCTGGCCAAGAACCGCATCAACCG...GTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGACAACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp ACGCACACGCGCGCACACATACACACACATACACTTGCACCCAGGTCTCACGTCATGATGGTGGCGGTCTaGTCGTCCCGGATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: THTRAHIHTHTLAPRSHVMMVAV*SSRISL
Trigger: CAAGGAGATCCGGGACGACAAGACCGCCACCATCAT...GACGTGAGACCTGGGTGCAAGTGTATGTGTGTGTATGTGTGCGCGCGTGTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp CCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGACAGCGTAATTCCACATGCGTaGGTAGGTCTGGTAGCGGGA +
Preference number: 5 (lower is better)
Translates to: PKSGEVSTLYKFRLAADSVIPHA*VGLVAG
Trigger: TCCCGCTACCAGACCTACCAACGCATGTGGAATTAC...GCTGTCAGCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCCCGCACAGCTTCCCGTaGCTGAGCGTCGCCGTGCCC +
Preference number: 5 (lower is better)
Translates to: WTFETLHLILPKTPSPVLPHSFP*LSVAVP
Trigger: GGGCACGGCGACGCTCAGCAACGGGAAGCTGTGCGG...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CAA 90 bp GTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGGCCGTCCTTTGCCCTTaGGGTGCAACGTTTCCGGGT +
Preference number: 5 (lower is better)
Translates to: VCEKHRMELQVGAEWHHWAVLCP*GATFPG
Trigger: ACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGC...CCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS CCA 90 bp TTGGCCTCCATCCGCCCAGGTCATAGAAAGCTAAGCGCAGGTGTGTaGATCCCTCTCTTGCTTCTCCCATCACCCCTAGCCAGCAAAAGG +
Preference number: 5 (lower is better)
Translates to: LASIRPGHRKLSAGV*IPLLLLPSPLASKR
Trigger: CCTTTTGCTGGCTAGGGGTGATGGGAGAAGCAAGAGAGGGATCCACACACCTGCGCTTAGCTTTCTATGACCTGGGCGGATGGAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526536.1
CDS-3UTR CAA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCTCGTCCCGGATCTCCTaGAGGAGCGGGGTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: WTFETLHLILPKTPSPVLSSRIS*RSGVGS
Trigger: GGACCCCACCCCGCTCCTCAAGGAGATCCGGGACGA...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CAA 90 bp CACGTTGTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCTTCACGCCGATCTCTaGGCTCCGGTTCAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: HVVCEKHRMELQVGAEWHLHADL*APVQFL
Trigger: CAGGAACTGAACCGGAGCCAAGAGATCGGCGTGAAG...GTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGACAACGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCTGGAGCCTCCGTGAATaGTGCCATATTCAATGGCGG +
Preference number: 5 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGWSLRE*CHIQWR
Trigger: CCGCCATTGAATATGGCACAATTCACGGAGGCTCCA...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CCAGGAGGGAGGGCCGTCCTTTGCCCTTTGGGTGCAACGTTTCCGGGTGGACCCTATACTCTTGTTATTTaGGCGAGAGGGAAAGACCCA +
Preference number: 5 (lower is better)
Translates to: PGGRAVLCPLGATFPGGPYTLVI*ARGKDP
Trigger: TGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATA...GGGTCCACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGACTTCGACCTTGGCCTaGCCCAGCCTCTCAGGAGCG +
Preference number: 5 (lower is better)
Translates to: SCYFGERERPTGRRWVLVTSTLA*PSLSGA
Trigger: CGCTCCTGAGAGGCTGGGCAAGGCCAAGGTCGAAGT...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp AGGTCAAGCAGCTGTAGAAAGCCTCGCCCCTCCCATCAGATGTGTGCTCTGGACTGGAGCCTCCGTGAATaGTGCCATATTCAATGGCGG +
Preference number: 5 (lower is better)
Translates to: RSSSCRKPRPSHQMCALDWSLRE*CHIQWR
Trigger: CCGCCATTGAATATGGCACAATTCACGGAGGCTCCA...GTCCAGAGCACACATCTGATGGGAGGGGCGAGGCTTTCTACAGCTGCTTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp GTCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGAATTCACCCACTAGCTaGAGCAAGGTGAGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: VCEKHRMELQVGAEWHHWNSPTS*SKVRPW
Trigger: CCAGGGCCTCACCTTGCTCAAGCTAGTGGGTGAATT...CCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAATGTCCACTTCGACCTaGGCCTTGCCCAGCCTCTCA +
Preference number: 5 (lower is better)
Translates to: PPPYTLVILARGKDPLGEMSTST*ALPSLS
Trigger: TGAGAGGCTGGGCAAGGCCAAGGTCGAAGTGGACAT...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TTTCTGTTGAATAAATACACACACGCACACGCGCGCACACATACACACACATACTCGTCCCGGATCTCCTaGAGGAGCGGGGTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: FLLNKYTHAHARTHTHTYSSRIS*RSGVGS
Trigger: GGACCCCACCCCGCTCCTCAAGGAGATCCGGGACGA...GTATGTGTGTGTATGTGTGCGCGCGTGTGCGTGTGTGTATTTATTCAACAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGGCCGTCCTTTGCCCTTaGGGTGCAACGTTTCCGGGT +
Preference number: 5 (lower is better)
Translates to: SCYFGERERPTGRRWVLVAVLCP*GATFPG
Trigger: ACCCGGAAACGTTGCACCCAAAGGGCAAAGGACGGC...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGAGGGAGGGCCGTCCTTaGCCCTTTGGGTGCAACGTT +
Preference number: 5 (lower is better)
Translates to: SCYFGERERPTGRRWVLVREGRP*PFGCNV
Trigger: AACGTTGCACCCAAAGGGCAAAGGACGGCCCTCCCT...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp ACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAAGTTCCGGCTGGCGGCGCTGGCAGTCTTATCTaGATTCCACACGGAGAAAGA +
Preference number: 5 (lower is better)
Translates to: TGSEIWRGVDAVQVPAGGAGSLI*IPHGER
Trigger: TCTTTCTCCGTGTGGAATCAAGATAAGACTGCCAGC...GCCGCCAGCCGGAACTTGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS CCA 90 bp TTCAGGATCCCAGCTACAGCCACGCTGATGTCAGTGTTGCTGGGGTaGAGGTTCAGGGTTGTGAATCTCTGGAACTGGAACTTGACGAAC +
Preference number: 5 (lower is better)
Translates to: FRIPATATLMSVLLG*RFRVVNLWNWNLTN
Trigger: GTTCGTCAAGTTCCAGTTCCAGAGATTCACAACCCTGAACCTCCACCCCAGCAACACTGACATCAGCGTGGCTGTAGCTGGGATCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS-3UTR CAA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCCAGGCGGTGGTGCAGTaGAAGAAGTTCAGGATCCCA +
Preference number: 5 (lower is better)
Translates to: LLFWREGKTHWEKMGPCAQAVVQ*KKFRIP
Trigger: TGGGATCCTGAACTTCTTCAACTGCACCACCGCCTG...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp GTTCCACCGGAAGCCAAGGCCATGGTATGGGAAAATTCTATCTGCTCTTTCCGCCAGGCGGTGGTGCAGTaGAAGAAGTTCAGGATCCCA +
Preference number: 5 (lower is better)
Translates to: VPPEAKAMVWENSICSFRQAVVQ*KKFRIP
Trigger: TGGGATCCTGAACTTCTTCAACTGCACCACCGCCTG...GCGGAAAGAGCAGATAGAATTTTCCCATACCATGGCCTTGGCTTCCGGTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGATGATGGTGGCGGTCTaGTCGTCCCGGATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SCYFGERERPTGRRWVLVMMVAV*SSRISL
Trigger: CAAGGAGATCCGGGACGACAAGACCGCCACCATCAT...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TCTGTGAGAAGCATAGGATGGAGCTGCAGGTTGGAGCAGAGTGGCACCATTGGGCTCTGGCCTTTGCTGTaGAATTCAATGTGGCCGGTA +
Preference number: 5 (lower is better)
Translates to: SVRSIGWSCRLEQSGTIGLWPLL*NSMWPV
Trigger: TACCGGCCACATTGAATTCAACAGCAAAGGCCAGAG...CCCAATGGTGCCACTCTGCTCCAACCTGCAGCTCCATCCTATGCTTCTCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp ACGCACACGCGCGCACACATACACACACATACACTTGCACCCAGGTCTCACGTCTTGGACCTCTGGCCTTaGCTGTTGAATTCAATGTGG +
Preference number: 5 (lower is better)
Translates to: THTRAHIHTHTLAPRSHVLDLWP*LLNSMW
Trigger: CCACATTGAATTCAACAGCAAAGGCCAGAGGTCCAA...GACGTGAGACCTGGGTGCAAGTGTATGTGTGTGTATGTGTGCGCGCGTGTGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGGGAAACCAGAGGCTGTaGCCCAGGGAGTACTGGTTC +
Preference number: 5 (lower is better)
Translates to: SCYFGERERPTGRRWVLVGNQRL*PREYWF
Trigger: GAACCAGTACTCCCTGGGCAACAGCCTCTGGTTTCC...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp ACCACCCAATCCATGATAGTCTTGGGGGTCTGGCTTCATAGGCAGCCACTCATTAGCAGAGTGGCACCATaGGGGTTTGTTGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: TTQSMIVLGVWLHRQPLISRVAP*GFVVSW
Trigger: CCAGCTGACAACAAACCCCAATGGTGCCACTCTGCT...AATGAGTGGCTGCCTATGAAGCCAGACCCCCAAGACTATCATGGATTGGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS TCA 90 bp AGGGGGTACTGGATTCAATGCTGTATTCAGTGGTTTGAGCTACCCTaGCCCTGTCTGGACAAAGCTACCCAAAGAGGCTGTTCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: RGYWIQCCIQWFELP*PCLDKATQRGCSSP
Trigger: GGGAGAGGAACAGCCTCTTTGGGTAGCTTTGTCCAGACAGGGTCAGGGTAGCTCAAACCACTGAATACAGCATTGAATCCAGTACCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533291.5
CDS CCA 90 bp GGATTCAATGCTGTATTCAGTGGTTTGAGCTACCCTGACCCTGTCTaGACAAAGCTACCCAAAGAGGCTGTTCCTCTCCCGCATACCGAC +
Preference number: 5 (lower is better)
Translates to: GFNAVFSGLSYPDPV*TKLPKEAVPLPHTD
Trigger: GTCGGTATGCGGGAGAGGAACAGCCTCTTTGGGTAGCTTTGTCCAGACAGGGTCAGGGTAGCTCAAACCACTGAATACAGCATTGAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533291.5
CDS-3UTR CAA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCATGTCCACTTCGACCTaGGCCTTGCCCAGCCTCTCA +
Preference number: 5 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPMSTST*ALPSLS
Trigger: TGAGAGGCTGGGCAAGGCCAAGGTCGAAGTGGACAT...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp ACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGCTCTGGAACTGGAACTaGACGAACTCCTCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: TLYSCYFGERERPTGRRWLWNWN*TNSSGA
Trigger: GGCCCCAGAGGAGTTCGTCAAGTTCCAGTTCCAGAG...CCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCACGCTGATGTCAGTGTaGCTGGGGTGGAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: WTFETLHLILPKTPSPVLTLMSV*LGWRFR
Trigger: CCTGAACCTCCACCCCAGCAACACTGACATCAGCGT...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CAA 90 bp ACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGACGCTGATGTCAGTGTaGCTGGGGTGGAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: TLYSCYFGERERPTGRRWTLMSV*LGWRFR
Trigger: CCTGAACCTCCACCCCAGCAACACTGACATCAGCGT...CCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGACGACCAGGGTGGTGTaGAAGAGAGTGTCCGAGATG +
Preference number: 5 (lower is better)
Translates to: SCYFGERERPTGRRWVLVTTRVV*KRVSEM
Trigger: CATCTCGGACACTCTCTTCAACACCACCCTGGTCGT...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TTGGCCCCCAGGACGGCAGCCCTAACTGATTGTCCTGGCATAAAGAGGATGCCGGTTGGTAGCGGCTGTTaGTTTCTCTCTGAATTTTCT +
Preference number: 5 (lower is better)
Translates to: LAPRTAALTDCPGIKRMPVGSGC*FLSEFS
Trigger: AGAAAATTCAGAGAGAAACAAACAGCCGCTACCAAC...CGGCATCCTCTTTATGCCAGGACAATCAGTTAGGGCTGCCGTCCTGGGGGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS CCA 90 bp GTTCAGGGTTGTGAATCTCTGGAACTGGAACTTGACGAACTCCTCTaGGGCCACTTTGAAGTGAGGGACCTCCTTCTCTCCACAGATGTT +
Preference number: 5 (lower is better)
Translates to: VQGCESLELELDELL*GHFEVRDLLLSTDV
Trigger: AACATCTGTGGAGAGAAGGAGGTCCCTCACTTCAAAGTGGCCCCAGAGGAGTTCGTCAAGTTCCAGTTCCAGAGATTCACAACCCTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS-3UTR CAA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCTTCTCTCCACAGATGTaGCTGATGATGGAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LLFWREGKTHWEKMGPCAFSPQM*LMMELE
Trigger: CTCCAGCTCCATCATCAGCAACATCTGTGGAGAGAA...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCACGGACAGCGTGTCCTaGGAGATAAGGAATTGCCGG +
Preference number: 5 (lower is better)
Translates to: WTFETLHLILPKTPSPVLTDSVS*EIRNCR
Trigger: CCGGCAATTCCTTATCTCCAAGGACACGCTGTCCGT...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CAA 90 bp TTGGCCCCCAGGACGGCAGCCCTAACTGATTGTCCTGGCATAAAGAGGATGCCGGAAGAAAGCATGGGATaGGTTGAAAATGGAAAATCC +
Preference number: 5 (lower is better)
Translates to: LAPRTAALTDCPGIKRMPEESMG*VENGKS
Trigger: GGATTTTCCATTTTCAACCAATCCCATGCTTTCTTC...CGGCATCCTCTTTATGCCAGGACAATCAGTTAGGGCTGCCGTCCTGGGGGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGCTCTGGGCAAACTCTaGGAAGAAAGCATGGGATTG +
Preference number: 5 (lower is better)
Translates to: PPPYTLVILARGKDPLGEALGKL*EESMGL
Trigger: CAATCCCATGCTTTCTTCCAAGAGTTTGCCCAGAGC...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCGCTCTGGGCAAACTCTaGGAAGAAAGCATGGGATTG +
Preference number: 5 (lower is better)
Translates to: LLFWREGKTHWEKMGPCAALGKL*EESMGL
Trigger: CAATCCCATGCTTTCTTCCAAGAGTTTGCCCAGAGC...GGCACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAACTGGTAGCGGGAATTTaGGAAGAAGGTCATGCTGGA +
Preference number: 5 (lower is better)
Translates to: PPPYTLVILARGKDPLGELVAGI*EEGHAG
Trigger: TCCAGCATGACCTTCTTCCAAAATTCCCGCTACCAG...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp GACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGATGAGTTCGGGCTCGCTGCTGTaGGTGGTTTTCTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: DRLTLDIPGVSRSEYRMSSGSLL*VVFSHS
Trigger: GGAGTGGGAGAAAACCACCAACAGCAGCGAGCCCGA...ACTCATCCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CAA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACATCGGGCTCGCTGCTGTaGGTGGTTTTCTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTSGSLL*VVFSHS
Trigger: GGAGTGGGAGAAAACCACCAACAGCAGCGAGCCCGA...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CAGAAACCGTCTAGTGCTGGCAGTCTTATCTTGATTCCACACGGAGAAAGAAACCACCATTGGGGTTTGTaGTCAGCTGGCCTTCGGGTG +
Preference number: 5 (lower is better)
Translates to: QKPSSAGSLILIPHGERNHHWGL*SAGLRV
Trigger: CACCCGAAGGCCAGCTGACAACAAACCCCAATGGTG...GTTTCTTTCTCCGTGTGGAATCAAGATAAGACTGCCAGCACTAGACGGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp CAGAAACCGTCTAGTGCTGGCAGTCTTATCTTGATTCCACACGGAGAAAGAAACTGGCACCATTGGGGTTaGTTGTCAGCTGGCCTTCGG +
Preference number: 5 (lower is better)
Translates to: QKPSSAGSLILIPHGERNWHHWG*LSAGLR
Trigger: CCGAAGGCCAGCTGACAACAAACCCCAATGGTGCCA...GTTTCTTTCTCCGTGTGGAATCAAGATAAGACTGCCAGCACTAGACGGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp AGAAAAGACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGCGGTTGATGCGGTTCTaGGCCAGGGTGATGGAGAGC +
Preference number: 5 (lower is better)
Translates to: RKDRLTLDIPGVSRSEYRRLMRF*ARVMES
Trigger: GCTCTCCATCACCCTGGCCAAGAACCGCATCAACCG...CCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CAA 90 bp TCTCAAAGTTTACTGCAATGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGCTCTCAGGAGCGCGGTaGATGCGGTTCTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SQSLLQWTFETLHLILPKLSGAR*MRFLAR
Trigger: CCTGGCCAAGAACCGCATCAACCGCGCTCCTGAGAG...CTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CAA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTTCTCTCCACAGATGTaGCTGATGATGGAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PYTLVILARGKDPLGEDGFSPQM*LMMELE
Trigger: CTCCAGCTCCATCATCAGCAACATCTGTGGAGAGAA...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACAATGATGGTGGCGGTCTaGTCGTCCCGGATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTMMVAV*SSRISL
Trigger: CAAGGAGATCCGGGACGACAAGACCGCCACCATCAT...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp AGAAAAGACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGTCGGGCTCGCTGCTGTaGGTGGTTTTCTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: RKDRLTLDIPGVSRSEYRSGSLL*VVFSHS
Trigger: GGAGTGGGAGAAAACCACCAACAGCAGCGAGCCCGA...CCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CAA 90 bp TCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTCCTTGTGCCCCACCCTATACTCTaGTTATTTTGGCGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: SCYFGERERPTGRRWVLVPHPIL*LFWREG
Trigger: TCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGG...CACAAGGACCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGGAAAATCCCAGGATGTaGACACGATCATCCACAAGG +
Preference number: 5 (lower is better)
Translates to: PYTLVILARGKDPLGEDGENPRM*TRSSTR
Trigger: CCTTGTGGATGATCGTGTCAACATCCTGGGATTTTC...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCGCTCTGGGCAAACTCTaGGAAGAAAGCATGGGATTG +
Preference number: 5 (lower is better)
Translates to: WTFETLHLILPKTPSPVLALGKL*EESMGL
Trigger: CAATCCCATGCTTTCTTCCAAGAGTTTGCCCAGAGC...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CAA 90 bp CCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGTTGGACCTCTGGCCTTaGCTGTTGAATTCAATGTGG +
Preference number: 5 (lower is better)
Translates to: PYTLVILARGKDPLGEDGLDLWP*LLNSMW
Trigger: CCACATTGAATTCAACAGCAAAGGCCAGAGGTCCAA...CCCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCTACACACACATACACTaGCACCCAGGTCTCACGTCT +
Preference number: 5 (lower is better)
Translates to: WTFETLHLILPKTPSPVLYTHIH*HPGLTS
Trigger: AGACGTGAGACCTGGGTGCAAGTGTATGTGTGTGTA...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp ACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGGAAAATCCCAGGATGTaGACACGATCATCCACAAGG +
Preference number: 5 (lower is better)
Translates to: TLYSCYFGERERPTGRRWENPRM*TRSSTR
Trigger: CCTTGTGGATGATCGTGTCAACATCCTGGGATTTTC...CCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp TCTCAAAGTTTACTGCAATGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGCTTCACGCCGATCTCTaGGCTCCGGTTCAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: SQSLLQWTFETLHLILPKLHADL*APVQFL
Trigger: CAGGAACTGAACCGGAGCCAAGAGATCGGCGTGAAG...CTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CAA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCTTGGACCTCTGGCCTTaGCTGTTGAATTCAATGTGG +
Preference number: 5 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPLDLWP*LLNSMW
Trigger: CCACATTGAATTCAACAGCAAAGGCCAGAGGTCCAA...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAATATACTCTTGTTATTTaGGCGAGAGGGAAAGACCCA +
Preference number: 5 (lower is better)
Translates to: PPPYTLVILARGKDPLGEYTLVI*ARGKDP
Trigger: TGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATA...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CCCCCACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGCCACTCATTTGAGTTaGGTTGAAAAGAGATGCAGT +
Preference number: 5 (lower is better)
Translates to: PPPYTLVILARGKDPLGEATHLS*VEKRCS
Trigger: ACTGCATCTCTTTTCAACCAAACTCAAATGAGTGGC...TTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp ATCTTTTTGAAAAGTGACTGGATCCGAAATCTGGAGAGGTGTCGACGCTGTACACTCTGGCCTTTGCTGTaGAATTCAATGTGGCCGGTA +
Preference number: 5 (lower is better)
Translates to: IFLKSDWIRNLERCRRCTLWPLL*NSMWPV
Trigger: TACCGGCCACATTGAATTCAACAGCAAAGGCCAGAG...TGTACAGCGTCGACACCTCTCCAGATTTCGGATCCAGTCACTTTTCAAAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp GACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGATGAGTCTGGTAGCGGGAATTTaGGAAGAAGGTCATGCTGGA +
Preference number: 5 (lower is better)
Translates to: DRLTLDIPGVSRSEYRMSLVAGI*EEGHAG
Trigger: TCCAGCATGACCTTCTTCCAAAATTCCCGCTACCAG...ACTCATCCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CAA 90 bp GTTCCACCGGAAGCCAAGGCCATGGTATGGGAAAATTCTATCTGCTCTTTCCGCAAAGACACAAGTGTCTaGCACAGCTTGTTGTCATTT +
Preference number: 5 (lower is better)
Translates to: VPPEAKAMVWENSICSFRKDTSV*HSLLSF
Trigger: AAATGACAACAAGCTGTGCAAGACACTTGTGTCTTT...GCGGAAAGAGCAGATAGAATTTTCCCATACCATGGCCTTGGCTTCCGGTGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp TCTCAAAGTTTACTGCAATGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGTGGAGCCTCCGTGAATaGTGCCATATTCAATGGCGG +
Preference number: 5 (lower is better)
Translates to: SQSLLQWTFETLHLILPKWSLRE*CHIQWR
Trigger: CCGCCATTGAATATGGCACAATTCACGGAGGCTCCA...CTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCATTGCAGTAAACTTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CAA 90 bp TGGACTTTTGAGACTCTCCATCTGATTCTTCCCAAGACTCCTTCTCCTGTGCTCTATACTCTTGTTATTTaGGCGAGAGGGAAAGACCCA +
Preference number: 5 (lower is better)
Translates to: WTFETLHLILPKTPSPVLYTLVI*ARGKDP
Trigger: TGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATA...GAGCACAGGAGAAGGAGTCTTGGGAAGAATCAGATGGAGAGTCTCAAAAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CAA 90 bp GTATGGGAAAATTCTATCTGCTCTTTCCGCTCCTTAAACAAAGTCCTAGGATACTTCTCTCCACAGATGTaGCTGATGATGGAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: VWENSICSFRSLNKVLGYFSPQM*LMMELE
Trigger: CTCCAGCTCCATCATCAGCAACATCTGTGGAGAGAA...GTATCCTAGGACTTTGTTTAAGGAGCGGAAAGAGCAGATAGAATTTTCCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS-3UTR CAA 90 bp GAAATTCAACTGATGATTCCACCAATTCATTGGACTGGTCTGGGTAGGGACCCCGAAGAAAGCATGGGATaGGTTGAAAATGGAAAATCC +
Preference number: 5 (lower is better)
Translates to: EIQLMIPPIHWTGLGRDPEESMG*VENGKS
Trigger: GGATTTTCCATTTTCAACCAATCCCATGCTTTCTTC...GGGGTCCCTACCCAGACCAGTCCAATGAATTGGTGGAATCATCAGTTGAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS-3UTR CAA 90 bp CAGAAACCGTCTAGTGCTGGCAGTCTTATCTTGATTCCACACGGAGAAAGAAACAAGAGTATTAGCTGGTaGCAAATTCACCCACTAGCT +
Preference number: 5 (lower is better)
Translates to: QKPSSAGSLILIPHGERNKSISW*QIHPLA
Trigger: AGCTAGTGGGTGAATTTGCAACCAGCTAATACTCTT...GTTTCTTTCTCCGTGTGGAATCAAGATAAGACTGCCAGCACTAGACGGTTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp ACCCTATACTCTTGTTATTTTGGCGAGAGGGAAAGACCCACTGGGAGAAGATGGATCAGTAACTCCTATTaGGTAGATGGAAGAGAAGTT +
Preference number: 5 (lower is better)
Translates to: TLYSCYFGERERPTGRRWISNSY*VDGREV
Trigger: AACTTCTCTTCCATCTACCAAATAGGAGTTACTGAT...CCATCTTCTCCCAGTGGGTCTTTCCCTCTCGCCAAAATAACAAGAGTATAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS TCA 90 bp AAGGTATTCCCTTCAAATGCATGTTCTGGGCGGAGTAAGAATGAATaGGTTAATTACAGACACTTAGAGACAGTCTACCCAGAAGTCAGC +
Preference number: 5 (lower is better)
Translates to: KVFPSNACSGRSKNE*VNYRHLETVYPEVS
Trigger: GCTGACTTCTGGGTAGACTGTCTCTAAGTGTCTGTAATTAACTCATTCATTCTTACTCCGCCCAGAACATGCATTTGAAGGGAATACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530172.1
CDS-3UTR CAA 90 bp CAGAAACCGTCTAGTGCTGGCAGTCTTATCTTGATTCCACACGGAGAAAGAAACCTTAAGGTCTTTCTGTaGAATAAATACACACACGCA +
Preference number: 5 (lower is better)
Translates to: QKPSSAGSLILIPHGERNLKVFL*NKYTHA
Trigger: TGCGTGTGTGTATTTATTCAACAGAAAGACCTTAAG...GTTTCTTTCTCCGTGTGGAATCAAGATAAGACTGCCAGCACTAGACGGTTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527524.8
CDS-3UTR CAA 90 bp AGAAAAGACAGATTAACCCTTGACATTCCAGGCGTTTCAAGGTCTGAGTATAGGGAAGAAAGCATGGGATaGGTTGAAAATGGAAAATCC +
Preference number: 5 (lower is better)
Translates to: RKDRLTLDIPGVSRSEYREESMG*VENGKS
Trigger: GGATTTTCCATTTTCAACCAATCCCATGCTTTCTTC...CCTATACTCAGACCTTGAAACGCCTGGAATGTCAAGGGTTAATCTGTCTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000527524.8
CDS CCA 72 bp TCGCTGCGGGCGGGCGACGGCCGTGCCCGCAGGCCCTaGAAGCGGCGGCACTCGGGGCAGACGCGGATGTGC +
Preference number: 6 (lower is better)
Translates to: SLRAGDGRARRP*KRRHSGQTRMC
Trigger: GCACATCCGCGTCTGCCCCGAGTGCCGCCGCTTCCAGGGCCTGCGGGCACGGCCGTCGCCCGCCCGCAGCGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS CCA 72 bp ACCAGGGCGGCCTCCTGCGCCAGTCTCTGCGCGAGCTaGTCGGGCTCCCCTGCCCCGCACAGCTTCCCGTTG +
Preference number: 6 (lower is better)
Translates to: TRAASCASLCAS*SGSPAPHSFPL
Trigger: CAACGGGAAGCTGTGCGGGGCAGGGGAGCCCGACCAGCTCGCGCAGAGACTGGCGCAGGAGGCCGCCCTGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS GCA 72 bp CTGCGCCAGTCTCTGCGCGAGCTGGTCGGGCTCCCCTaGCCCGCACAGCTTCCCGTTGCTGAGCGTCGCCGT +
Preference number: 6 (lower is better)
Translates to: LRQSLRELVGLP*PAQLPVAERRR
Trigger: ACGGCGACGCTCAGCAACGGGAAGCTGTGCGGGGCAGGGGAGCCCGACCAGCTCGCGCAGAGACTGGCGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS GCA 72 bp TATCTGCTGCTGCGGCGGCGGCCGTGCCCTTTAGGGTaGATTAGTATTCCCGCCGCGGGCGCTGCCCTCGCG +
Preference number: 6 (lower is better)
Translates to: YLLLRRRPCPLG*ISIPAAGAALA
Trigger: CGCGAGGGCAGCGCCCGCGGCGGGAATACTAATGCACCCTAAAGGGCACGGCCGCCGCCGCAGCAGCAGATA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533291.5
CDS CCA 72 bp GAGCCGCCCGGACCTCGGAGGGGATGGGGTCCTCTCTaGGAGGCACCCGTCTCCTTCCTGGGTCCTAAGACC +
Preference number: 6 (lower is better)
Translates to: EPPGPRRGWGPL*EAPVSFLGPKT
Trigger: GGTCTTAGGACCCAGGAAGGAGACGGGTGCCTCCCAGAGAGGACCCCATCCCCTCCGAGGTCCGGGCGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438375.2
ENST00000533291.5
CDS GCA 72 bp ATAACTCTGCTGCGGCGGCGGCCGTGCCCTTTAGGGTaGATTAGTATTCCCGCCGCGGGCGCTGCCCTCGCG +
Preference number: 6 (lower is better)
Translates to: ITLLRRRPCPLG*ISIPAAGAALA
Trigger: CGCGAGGGCAGCGCCCGCGGCGGGAATACTAATGCACCCTAAAGGGCACGGCCGCCGCCGCAGCAGAGTTAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438375.2
CDS CCA 72 bp CTGCTGTTGGCCGTTTTTCCTCTTCCGCAGCAGCCGTaGCGGCTCCAGCCCGATCCGCCCGCAGCTGAAGGC +
Preference number: 6 (lower is better)
Translates to: LLLAVFPLPQQP*RLQPDPPAAEG
Trigger: GCCTTCAGCTGCGGGCGGATCGGGCTGGAGCCGCCACGGCTGCTGCGGAAGAGGAAAAACGGCCAACAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527524.8
ENST00000638419.1
CDS CAA 72 bp GCGATCAGCTCCCCGACCATTCCCGTCCAGGTGCCGTaGGCCTCGGGAACGCCGTACACGCCATCCCCAACC +
Preference number: 6 (lower is better)
Translates to: AISSPTIPVQVP*ASGTPYTPSPT
Trigger: GGTTGGGGATGGCGTGTACGGCGTTCCCGAGGCCAACGGCACCTGGACGGGAATGGTCGGGGAGCTGATCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS TCA 72 bp ACTGCGGCGCGCCGCCGGCGGGGGTGGATACTGTCCTaGCACAGGATAATGCTGCGCAGCTCGGTCACCATC +
Preference number: 6 (lower is better)
Translates to: TAARRRRGWILS*HRIMLRSSVTI
Trigger: GATGGTGACCGAGCTGCGCAGCATTATCCTGTGTCAGGACAGTATCCACCCCCGCCGGCGGCGCGCCGCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000638419.1
CDS CCA 72 bp GATGGGGTCCTCTCTGGGAGGCACCCGTCTCCTTCCTaGGTCCTAAGACCCTTCCCAGCCCTGCGCTCCGAC +
Preference number: 6 (lower is better)
Translates to: DGVLSGRHPSPS*VLRPFPALRSD
Trigger: GTCGGAGCGCAGGGCTGGGAAGGGTCTTAGGACCCAGGAAGGAGACGGGTGCCTCCCAGAGAGGACCCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438375.2
CDS CCA 72 bp CGATCAGCTCCCCGACCATTCCCGTCCAGGTGCCGTTaGCCTCGGGAACGCCGTACACGCCATCCCCAACCA +
Preference number: 6 (lower is better)
Translates to: RSAPRPFPSRCR*PRERRTRHPQP
Trigger: TGGTTGGGGATGGCGTGTACGGCGTTCCCGAGGCCAACGGCACCTGGACGGGAATGGTCGGGGAGCTGATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS CAA 90 bp GCTTTCCTAGCGATCAGCTCCCCGACCATTCCCGTCCAGGTGCCGTaGGCCTCGGGAACGCCGTACACGCCATCCCCAACCAGGCGGATC +
Preference number: 6 (lower is better)
Translates to: AFLAISSPTIPVQVP*ASGTPYTPSPTRRI
Trigger: GATCCGCCTGGTTGGGGATGGCGTGTACGGCGTTCCCGAGGCCAACGGCACCTGGACGGGAATGGTCGGGGAGCTGATCGCTAGGAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS GCA 72 bp CCTGGGCATGACATAACTCTGCTGCGGCGGCGGCCGTaGCCTTTAGGGTGCATTAGTATTCCCGCCGCGGGC +
Preference number: 6 (lower is better)
Translates to: PGHDITLLRRRP*PLGCISIPAAG
Trigger: GCCCGCGGCGGGAATACTAATGCACCCTAAAGGGCACGGCCGCCGCCGCAGCAGAGTTATGTCATGCCCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438375.2
CDS CAA 72 bp TTGCCCAGCCTCTCAGGAGCGCGGTTGATGCGGTTCTaGGCCAGGGTGATGGAGAGCCGCTCCCCTCTGCTG +
Preference number: 6 (lower is better)
Translates to: LPSLSGARLMRF*ARVMESRSPLL
Trigger: CAGCAGAGGGGAGCGGCTCTCCATCACCCTGGCCAAGAACCGCATCAACCGCGCTCCTGAGAGGCTGGGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000438375.2
ENST00000526536.1
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS CAA 72 bp GGCCGAGCCGCAGGACAAGGGCTTCACGCCGATCTCTaGGCTCCGGTTCAGTTCCTGCACCGCAGTCACCAC +
Preference number: 6 (lower is better)
Translates to: GRAAGQGLHADL*APVQFLHRSHH
Trigger: GTGGTGACTGCGGTGCAGGAACTGAACCGGAGCCAAGAGATCGGCGTGAAGCCCTTGTCCTGCGGCTCGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS CAA 90 bp ACCTTGGCCTTGCCCAGCCTCTCAGGAGCGCGGTTGATGCGGTTCTaGGCCAGGGTGATGGAGAGCCGCTCCCCTCTGCTGCACTCCATG +
Preference number: 6 (lower is better)
Translates to: TLALPSLSGARLMRF*ARVMESRSPLLHSM
Trigger: CATGGAGTGCAGCAGAGGGGAGCGGCTCTCCATCACCCTGGCCAAGAACCGCATCAACCGCGCTCCTGAGAGGCTGGGCAAGGCCAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000438375.2
ENST00000526536.1
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS TCA 72 bp CCGAGATGTTGGAGGCATAGAGGTGGCTGTCCATGCTaGGGCCCTCTGCCACGTGCCACTGGCCGATCTGCC +
Preference number: 6 (lower is better)
Translates to: PRCWRHRGGCPC*GPLPRATGRSA
Trigger: GGCAGATCGGCCAGTGGCACGTGGCAGAGGGCCTCAGCATGGACAGCCACCTCTATGCCTCCAACATCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS GCA 72 bp GCACTCAGAAAGTATCTGCTGCTGCGGCGGCGGCCGTaGCCTTTAGGGTGCATTAGTATTCCCGCCGCGGGC +
Preference number: 6 (lower is better)
Translates to: ALRKYLLLRRRP*PLGCISIPAAG
Trigger: GCCCGCGGCGGGAATACTAATGCACCCTAAAGGGCACGGCCGCCGCCGCAGCAGCAGATACTTTCTGAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533291.5
CDS CCA 72 bp GTTGCTGATGATGGAGCTGGAGGCTGGGCTGGACGATaGTCCGAGGACAGCGACCACCCCCTTGGGGAGGAT +
Preference number: 6 (lower is better)
Translates to: VADDGAGGWAGR*SEDSDHPLGED
Trigger: ATCCTCCCCAAGGGGGTGGTCGCTGTCCTCGGACCATCGTCCAGCCCAGCCTCCAGCTCCATCATCAGCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS CCA 72 bp GCCGAGCCGCAGGACAAGGGCTTCACGCCGATCTCTTaGCTCCGGTTCAGTTCCTGCACCGCAGTCACCACA +
Preference number: 6 (lower is better)
Translates to: AEPQDKGFTPIS*LRFSSCTAVTT
Trigger: TGTGGTGACTGCGGTGCAGGAACTGAACCGGAGCCAAGAGATCGGCGTGAAGCCCTTGTCCTGCGGCTCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS CAA 90 bp ATGTCCACTTCGACCTTGGCCTTGCCCAGCCTCTCAGGAGCGCGGTaGATGCGGTTCTTGGCCAGGGTGATGGAGAGCCGCTCCCCTCTG +
Preference number: 6 (lower is better)
Translates to: MSTSTLALPSLSGAR*MRFLARVMESRSPL
Trigger: CAGAGGGGAGCGGCTCTCCATCACCCTGGCCAAGAACCGCATCAACCGCGCTCCTGAGAGGCTGGGCAAGGCCAAGGTCGAAGTGGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000438375.2
ENST00000526536.1
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS CAA 90 bp CCAGATCTGGGCCGAGCCGCAGGACAAGGGCTTCACGCCGATCTCTaGGCTCCGGTTCAGTTCCTGCACCGCAGTCACCACAGCATAGAC +
Preference number: 6 (lower is better)
Translates to: PDLGRAAGQGLHADL*APVQFLHRSHHSID
Trigger: GTCTATGCTGTGGTGACTGCGGTGCAGGAACTGAACCGGAGCCAAGAGATCGGCGTGAAGCCCTTGTCCTGCGGCTCGGCCCAGATCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS CCA 72 bp GGGGCATCTTCTATGAATCCTCATGGAGCCCCCTGCTaGCCTGGGCATGACATAACTCTGCTGCGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: GASSMNPHGAPC*PGHDITLLRRR
Trigger: CCGCCGCCGCAGCAGAGTTATGTCATGCCCAGGCCAGCAGGGGGCTCCATGAGGATTCATAGAAGATGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438375.2
CDS GCA 72 bp GGAGGCATAGAGGTGGCTGTCCATGCTGAGGCCCTCTaGCACGTGCCACTGGCCGATCTGCCGAAAACCATT +
Preference number: 6 (lower is better)
Translates to: GGIEVAVHAEAL*HVPLADLPKTI
Trigger: AATGGTTTTCGGCAGATCGGCCAGTGGCACGTGGCAGAGGGCCTCAGCATGGACAGCCACCTCTATGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS CAA 90 bp TCGCTGTCTCTGAGAAGCTCAAAGATGTCCACTTCGACCTTGGCCTaGCCCAGCCTCTCAGGAGCGCGGTTGATGCGGTTCTTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SLSLRSSKMSTSTLA*PSLSGARLMRFLAR
Trigger: CCTGGCCAAGAACCGCATCAACCGCGCTCCTGAGAGGCTGGGCAAGGCCAAGGTCGAAGTGGACATCTTTGAGCTTCTCAGAGACAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000438375.2
ENST00000526536.1
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS CAA 72 bp CTGAGAAGCTCAAAGATGTCCACTTCGACCTTGGCCTaGCCCAGCCTCTCAGGAGCGCGGTTGATGCGGTTC +
Preference number: 6 (lower is better)
Translates to: LRSSKMSTSTLA*PSLSGARLMRF
Trigger: GAACCGCATCAACCGCGCTCCTGAGAGGCTGGGCAAGGCCAAGGTCGAAGTGGACATCTTTGAGCTTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000438375.2
ENST00000526536.1
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS CAA 72 bp CGGGTGTCATCCAGCATGCGGACGGACAGCGTGTCCTaGGAGATAAGGAATTGCCGGAGCAGCTTCTCTAGG +
Preference number: 6 (lower is better)
Translates to: RVSSSMRTDSVS*EIRNCRSSFSR
Trigger: CCTAGAGAAGCTGCTCCGGCAATTCCTTATCTCCAAGGACACGCTGTCCGTCCGCATGCTGGATGACACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS CAA 90 bp CGCCCAGGTCATAGAAAGCTAAGCGCAGGTGTGTGGATCCCTCTCTaGCTTCTCCCATCACCCCTAGCCAGCAAAAGGTCCCACCAGTCA +
Preference number: 6 (lower is better)
Translates to: RPGHRKLSAGVWIPL*LLPSPLASKRSHQS
Trigger: TGACTGGTGGGACCTTTTGCTGGCTAGGGGTGATGGGAGAAGCAAGAGAGGGATCCACACACCTGCGCTTAGCTTTCTATGACCTGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526536.1
CDS CCA 72 bp ATCCGCCCAGGTCATAGAAAGCTAAGCGCAGGTGTGTaGATCCCTCTCTTGCTTCTCCCATCACCCCTAGCC +
Preference number: 6 (lower is better)
Translates to: IRPGHRKLSAGV*IPLLLLPSPLA
Trigger: GGCTAGGGGTGATGGGAGAAGCAAGAGAGGGATCCACACACCTGCGCTTAGCTTTCTATGACCTGGGCGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526536.1
CDS CAA 72 bp TCTGCTTTGGCACAGATGAGGCAGGCGGTGGTGCAGTaGAAGAAGTTCAGGATCCCAGCTACAGCCACGCTG +
Preference number: 6 (lower is better)
Translates to: SALAQMRQAVVQ*KKFRIPATATL
Trigger: CAGCGTGGCTGTAGCTGGGATCCTGAACTTCTTCAACTGCACCACCGCCTGCCTCATCTGTGCCAAAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS CCA 72 bp CCAGCTACAGCCACGCTGATGTCAGTGTTGCTGGGGTaGAGGTTCAGGGTTGTGAATCTCTGGAACTGGAAC +
Preference number: 6 (lower is better)
Translates to: PATATLMSVLLG*RFRVVNLWNWN
Trigger: GTTCCAGTTCCAGAGATTCACAACCCTGAACCTCCACCCCAGCAACACTGACATCAGCGTGGCTGTAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS CCA 72 bp GCTGTATTCAGTGGTTTGAGCTACCCTGACCCTGTCTaGACAAAGCTACCCAAAGAGGCTGTTCCTCTCCCG +
Preference number: 6 (lower is better)
Translates to: AVFSGLSYPDPV*TKLPKEAVPLP
Trigger: CGGGAGAGGAACAGCCTCTTTGGGTAGCTTTGTCCAGACAGGGTCAGGGTAGCTCAAACCACTGAATACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533291.5
CDS CAA 72 bp CATAGAAAGCTAAGCGCAGGTGTGTGGATCCCTCTCTaGCTTCTCCCATCACCCCTAGCCAGCAAAAGGTCC +
Preference number: 6 (lower is better)
Translates to: HRKLSAGVWIPL*LLPSPLASKRS
Trigger: GGACCTTTTGCTGGCTAGGGGTGATGGGAGAAGCAAGAGAGGGATCCACACACCTGCGCTTAGCTTTCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526536.1
CDS CAA 90 bp AAAAGGCATTCTGCTTTGGCACAGATGAGGCAGGCGGTGGTGCAGTaGAAGAAGTTCAGGATCCCAGCTACAGCCACGCTGATGTCAGTG +
Preference number: 6 (lower is better)
Translates to: KRHSALAQMRQAVVQ*KKFRIPATATLMSV
Trigger: CACTGACATCAGCGTGGCTGTAGCTGGGATCCTGAACTTCTTCAACTGCACCACCGCCTGCCTCATCTGTGCCAAAGCAGAATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS CCA 72 bp TGTGAATCTCTGGAACTGGAACTTGACGAACTCCTCTaGGGCCACTTTGAAGTGAGGGACCTCCTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: CESLELELDELL*GHFEVRDLLLS
Trigger: GGAGAGAAGGAGGTCCCTCACTTCAAAGTGGCCCCAGAGGAGTTCGTCAAGTTCCAGTTCCAGAGATTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS TCA 72 bp CAGGGGGTACTGGATTCAATGCTGTATTCAGTGGTTTaGGCTACCCTGACCCTGTCTGGACAAAGCTACCCA +
Preference number: 6 (lower is better)
Translates to: QGVLDSMLYSVV*ATLTLSGQSYP
Trigger: TGGGTAGCTTTGTCCAGACAGGGTCAGGGTAGCTCAAACCACTGAATACAGCATTGAATCCAGTACCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533291.5
CDS CAA 72 bp ACAGGGGGTACTGGATTCAATGCTGTATTCAGTGGTTaGAGCTACCCTGACCCTGTCTGGACAAAGCTACCC +
Preference number: 6 (lower is better)
Translates to: TGGTGFNAVFSG*SYPDPVWTKLP
Trigger: GGGTAGCTTTGTCCAGACAGGGTCAGGGTAGCTCAAACCACTGAATACAGCATTGAATCCAGTACCCCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533291.5
CDS GCA 72 bp TTCTCCTCCAAAATCCATGAGTGCCTGGCAGTGGCGTaGTTCAGAACGCAATCTGGGAAATGCTACTCTACA +
Preference number: 6 (lower is better)
Translates to: FSSKIHECLAVA*FRTQSGKCYST
Trigger: TGTAGAGTAGCATTTCCCAGATTGCGTTCTGAAGCACGCCACTGCCAGGCACTCATGGATTTTGGAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527130.5
CDS CAA 90 bp GTTCTAACAACAGGGGGTACTGGATTCAATGCTGTATTCAGTGGTTaGAGCTACCCTGACCCTGTCTGGACAAAGCTACCCAAAGAGGCT +
Preference number: 6 (lower is better)
Translates to: VLTTGGTGFNAVFSG*SYPDPVWTKLPKEA
Trigger: AGCCTCTTTGGGTAGCTTTGTCCAGACAGGGTCAGGGTAGCTCAAACCACTGAATACAGCATTGAATCCAGTACCCCCTGTTGTTAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533291.5
CDS TCA 72 bp CGTGCCACTGGCCGATCTGCCGAAAACCATTCCTTGTaGACTGTAAGATTTTCAAAGCGTAGTTGGACCTCT +
Preference number: 6 (lower is better)
Translates to: RATGRSAENHSL*TVRFSKRSWTS
Trigger: AGAGGTCCAACTACGCTTTGAAAATCTTACAGTTCACAAGGAATGGTTTTCGGCAGATCGGCCAGTGGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS TCA 72 bp TCCATTCTCTGGAGTGAGAACTCCATACTGGCTGTTTaGCTTTCGGCAAGGTCTGTAACCTTCTGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: SILWSENSILAV*LSARSVTFWAS
Trigger: TGAAGCCCAGAAGGTTACAGACCTTGCCGAAAGTCAAACAGCCAGTATGGAGTTCTCACTCCAGAGAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527130.5
ENST00000530172.1
CDS TCA 72 bp TGGATTCAATGCTGTATTCAGTGGTTTGAGCTACCCTaGCCCTGTCTGGACAAAGCTACCCAAAGAGGCTGT +
Preference number: 6 (lower is better)
Translates to: WIQCCIQWFELP*PCLDKATQRGC
Trigger: ACAGCCTCTTTGGGTAGCTTTGTCCAGACAGGGTCAGGGTAGCTCAAACCACTGAATACAGCATTGAATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533291.5
CDS CAA 72 bp CTCCTGCCAGGACTGGTTGAGGCTCTGGGCAAACTCTaGGAAGAAAGCATGGGATTGGTTGAAAATGGAAAA +
Preference number: 6 (lower is better)
Translates to: LLPGLVEALGKL*EESMGLVENGK
Trigger: TTTTCCATTTTCAACCAATCCCATGCTTTCTTCCAAGAGTTTGCCCAGAGCCTCAACCAGTCCTGGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000530172.1
ENST00000533291.5
ENST00000638419.1
CDS TCA 72 bp GAACTCCAGATTAGTGAAGATGTATGTGTAATAGGCTaGCACCATCCCAAGTTCGGCTGCCTTCAGGAGGAT +
Preference number: 6 (lower is better)
Translates to: ELQISEDVCVIG*HHPKFGCLQED
Trigger: ATCCTCCTGAAGGCAGCCGAACTTGGGATGGTGTCAGCCTATTACACATACATCTTCACTAATCTGGAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000533291.5
ENST00000638419.1
CDS CAA 90 bp TGGAAGAAAGCATGGGATTGGTTGAAAATGGAAAATCCCAGGATGTaGACACGATCATCCACAAGGCTGTCCATTCTCTGGAGTGAGAAC +
Preference number: 6 (lower is better)
Translates to: WKKAWDWLKMENPRM*TRSSTRLSILWSEN
Trigger: GTTCTCACTCCAGAGAATGGACAGCCTTGTGGATGATCGTGTCAACATCCTGGGATTTTCCATTTTCAACCAATCCCATGCTTTCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000438375.2
ENST00000527524.8
ENST00000530172.1
ENST00000533291.5
ENST00000638419.1
CDS CCA 72 bp GCTTCCTTGATAATTCATTCTATTTATAATGACTCATaGGATAGCCATGGAACAAAGCAGGACTATGGGTTT +
Preference number: 6 (lower is better)
Translates to: ASLIIHSIYNDS*DSHGTKQDYGF
Trigger: AAACCCATAGTCCTGCTTTGTTCCATGGCTATCCCATGAGTCATTATAAATAGAATGAATTATCAAGGAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527130.5
CDS CAA 72 bp TTTCTTAGAAATCCAAAGTCAAGTGGTGGAGACATTTaGCGGAGAGAGATATTTCATAAAACGAACACATTT +
Preference number: 6 (lower is better)
Translates to: FLRNPKSSGGDI*RREIFHKTNTF
Trigger: AAATGTGTTCGTTTTATGAAATATCTCTCTCCGCAAAATGTCTCCACCACTTGACTTTGGATTTCTAAGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527130.5