RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRIK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000171189

Ensembl transcript IDs: ENST00000327783.8, ENST00000389124.6, ENST00000389125.7, ENST00000399907.5, ENST00000399909.5, ENST00000399913.5, ENST00000399914.5, ENST00000472429.1

Found 356 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTAGAAGTCTTTATACCCCTAATATGCCCCTGCTTCAACATACAGTaGAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGAATACAT +
Preference number: 1 (lower is better)
Translates to: LEVFIPLICPCFNIQ*KYLSSVFISMSRIH
Trigger: ATGTATTCTAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCATATTAGGGGTATAAAGACTTCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGTCCAGAGCCCGGGCTaGGCGAGGAGTGTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWVQSPG*ARSVPC
Trigger: GCACGGCACACTCCTCGCCCAGCCCGGGCTCTGGAC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTGTCCAGAGCCCGGGCTaGGCGAGGAGTGTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTVQSPG*ARSVPC
Trigger: GCACGGCACACTCCTCGCCCAGCCCGGGCTCTGGAC...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCCCAGCTGGTGTCCCTaGTCCAGAGCCCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWPSWCP*SRARAG
Trigger: CCCAGCCCGGGCTCTGGACCAGGGACACCAGCTGGG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTCCCAGCTGGTGTCCCTaGTCCAGAGCCCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTPSWCP*SRARAG
Trigger: CCCAGCCCGGGCTCTGGACCAGGGACACCAGCTGGG...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTCGAGGGAACCCGCGTaGGACCGCGGAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWSREPA*DRGAGW
Trigger: CCAGCCAGCTCCGCGGTCCCACGCGGGTTCCCTCGA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399914.5
CDS-3UTR TCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGCTGGCTGGCAAGGCTaGGCTCTCTCGGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWAGWQG*ALSGLL
Trigger: GAGGAGCCCCGAGAGAGCTCAGCCTTGCCAGCCAGC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000399914.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCGGTTCCAAGCACGCTaGGCGCTCCCCACGGAGCGA +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWRFQAR*ALPTER
Trigger: TCGCTCCGTGGGGAGCGCGCAGCGTGCTTGGAACCG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGGCCTGGGTGGGGCCTaGAGTCTCTCCATGGACCAC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWGLGGA*SLSMDH
Trigger: GTGGTCCATGGAGAGACTGCAGGCCCCACCCAGGCC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGACGGTCAGCTGGGATaGCCGGTGCGAGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWDGQLG*PVRGNG
Trigger: GCCATTGCCTCGCACCGGGCATCCCAGCTGACCGTC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCGGACGCCCGAGAGATaGACCCAACTTGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWRTPER*TQLGPG
Trigger: ACCCGGCCCAAGTTGGGTGCATCTCTCGGGCGTCCG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCCGAGATACAGCCGCTaGCGGACGCCCGAGAGATGC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWPRYSR*RTPERC
Trigger: GCATCTCTCGGGCGTCCGGCAGCGGCTGTATCTCGG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGAGCTGACGGTCAGCTaGGATGCCCGGTGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWELTVS*DARCEA
Trigger: TGCCTCGCACCGGGCATCCCAGCTGACCGTCAGCTC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCCTCCTCCTCTTCCATaGGCCGCAGACCGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWPPPLP*AADRGG
Trigger: TCCTCCGCGGTCTGCGGCCCATGGAAGAGGAGGAGG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399914.5
CDS-3UTR CCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCGAGGGAACCCGCGTaGGACCGCGGAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMSREPA*DRGAGW
Trigger: CCAGCCAGCTCCGCGGTCCCACGCGGGTTCCCTCGA...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp ATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACGGCCTGGGTGGGGCCTaGAGTCTCTCCATGGACCAC +
Preference number: 4 (lower is better)
Translates to: ISPTEMIQTLIGLSRHTDGLGGA*SLSMDH
Trigger: GTGGTCCATGGAGAGACTGCAGGCCCCACCCAGGCC...GTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGAGCTGGGATGCCCGGTaGGAGGCAATGGCCACCATG +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWSWDAR*EAMATM
Trigger: CATGGTGGCCATTGCCTCGCACCGGGCATCCCAGCT...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACGGTCAGCTGGGATaGCCGGTGCGAGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTDGQLG*PVRGNG
Trigger: GCCATTGCCTCGCACCGGGCATCCCAGCTGACCGTC...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR GCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGCGGTTCCAAGCACGCTaGGCGCTCCCCACGGAGCGA +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMRFQAR*ALPTER
Trigger: TCGCTCCGTGGGGAGCGCGCAGCGTGCTTGGAACCG...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGAGAGGAGTGCCCAGCTaGTGTCCCTGGTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWRGVPS*CPWSRA
Trigger: GGCTCTGGACCAGGGACACCAGCTGGGCACTCCTCT...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGAGTCTCGGGCCTGGGTaGGGCCTGCAGTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWSLGPG*GLQSLH
Trigger: ATGGAGAGACTGCAGGCCCCACCCAGGCCCGAGACT...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGAGCTGACGGTCAGCTaGGATGCCCGGTGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTELTVS*DARCEA
Trigger: TGCCTCGCACCGGGCATCCCAGCTGACCGTCAGCTC...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGAGATGCACCCAACTTaGGCCGGGTCCCCGCCTCAT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWEMHPT*AGSPPH
Trigger: ATGAGGCGGGGACCCGGCCCAAGTTGGGTGCATCTC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGAGGATCAGCGCTCTCTaGCTCCCGGAGCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWRISAL*LPEPRD
Trigger: GTCTCTGGGCTCCGGGAGCCAGAGAGCGCTGATCCT...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399914.5
CDS-3UTR CCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTTCGAGGGAACCCGCGTaGGACCGCGGAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSSREPA*DRGAGW
Trigger: CCAGCCAGCTCCGCGGTCCCACGCGGGTTCCCTCGA...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGCGCGTAGTCTGTGGTaGGCACTCTCTGGATCCCCT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWARSLW*ALSGSP
Trigger: AGGGGATCCAGAGAGTGCTCACCACAGACTACGCGC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR TCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGAGCCCAGAGACCAGCTaGGGAAAGTTGCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWSPETS*GKLLPR
Trigger: TCGGGGCAGCAACTTTCCTCAGCTGGTCTCTGGGCT...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000399914.5
CDS-3UTR GCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGAGCTGGGATGCCCGGTaGGAGGCAATGGCCACCATG +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTSWDAR*EAMATM
Trigger: CATGGTGGCCATTGCCTCGCACCGGGCATCCCAGCT...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR GCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGCGGACGCCCGAGAGATaGACCCAACTTGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMRTPER*TQLGPG
Trigger: ACCCGGCCCAAGTTGGGTGCATCTCTCGGGCGTCCG...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGCCGAGATACAGCCGCTaGCGGACGCCCGAGAGATGC +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMPRYSR*RTPERC
Trigger: GCATCTCTCGGGCGTCCGGCAGCGGCTGTATCTCGG...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGTCCAGAGCCCGGGCTaGGCGAGGAGTGTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLVQSPG*ARSVPC
Trigger: GCACGGCACACTCCTCGCCCAGCCCGGGCTCTGGAC...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGAGAGGAGTGCCCAGCTaGTGTCCCTGGTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTRGVPS*CPWSRA
Trigger: GGCTCTGGACCAGGGACACCAGCTGGGCACTCCTCT...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp ATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACAGTCTCGGGCCTGGGTaGGGCCTGCAGTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: ISPTEMIQTLIGLSRHTDSLGPG*GLQSLH
Trigger: ATGGAGAGACTGCAGGCCCCACCCAGGCCCGAGACT...GTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGGAGCTGACGGTCAGCTaGGATGCCCGGTGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMELTVS*DARCEA
Trigger: TGCCTCGCACCGGGCATCCCAGCTGACCGTCAGCTC...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCTCCAGCAGGTTAACTaGGAGCGGAGCCACGTTCCG +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWLQQVN*ERSHVP
Trigger: CGGAACGTGGCTCCGCTCCCAGTTAACCTGCTGGAG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399914.5
CDS-3UTR TCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGAAATCCCTCCGATCCTaGGTACTTGCGGGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWKSLRS*VLAGRS
Trigger: AGACCGCCCCGCAAGTACTCAGGATCGGAGGGATTT...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR TCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTAAATCCCTCCGATCCTaGGTACTTGCGGGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTKSLRS*VLAGRS
Trigger: AGACCGCCCCGCAAGTACTCAGGATCGGAGGGATTT...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR TCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCTGGAGACAGGGGGTTaGGGAAGGAGAAAACGCCTG +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWLETGG*GRRKRL
Trigger: CAGGCGTTTTCTCCTTCCTCAACCCCCTGTCTCCAG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR TCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTCTGGAGACAGGGGGTTaGGGAAGGAGAAAACGCCTG +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTLETGG*GRRKRL
Trigger: CAGGCGTTTTCTCCTTCCTCAACCCCCTGTCTCCAG...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR TCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGCGCGTAGTCTGTGGTaGGCACTCTCTGGATCCCCT +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTARSLW*ALSGSP
Trigger: AGGGGATCCAGAGAGTGCTCACCACAGACTACGCGC...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR TCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGCTGGCTGGCAAGGCTaGGCTCTCTCGGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLAGWQG*ALSGLL
Trigger: GAGGAGCCCCGAGAGAGCTCAGCCTTGCCAGCCAGC...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTGGCCTGGGTGGGGCCTaGAGTCTCTCCATGGACCAC +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSGLGGA*SLSMDH
Trigger: GTGGTCCATGGAGAGACTGCAGGCCCCACCCAGGCC...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCGGACGCCCGAGAGATaGACCCAACTTGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSRTPER*TQLGPG
Trigger: ACCCGGCCCAAGTTGGGTGCATCTCTCGGGCGTCCG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTACGGTTCCAAGCACGCTaGGCGCTCCCCACGGAGCGA +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLRFQAR*ALPTER
Trigger: TCGCTCCGTGGGGAGCGCGCAGCGTGCTTGGAACCG...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTACAGGGTGAGTTGGTaGAGGGGCTCTGAGCAAGCC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWYRVSW*RGSEQA
Trigger: GGCTTGCTCAGAGCCCCTGCACCAACTCACCCTGTA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000399914.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGACACCAAGAGCCAGCTaGTCACATGCTCTCCGCGAG +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWTPRAS*SHALRE
Trigger: CTCGCGGAGAGCATGTGACCAGCTGGCTCTTGGTGT...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGAGTCTCGGGCCTGGGTaGGGCCTGCAGTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMSLGPG*GLQSLH
Trigger: ATGGAGAGACTGCAGGCCCCACCCAGGCCCGAGACT...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCCCGGTGCGAGGCAATaGCCACCATGTACACAGCAT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWPGARQ*PPCTQH
Trigger: ATGCTGTGTACATGGTGGCCATTGCCTCGCACCGGG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTGAGCTGACGGTCAGCTaGGATGCCCGGTGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSELTVS*DARCEA
Trigger: TGCCTCGCACCGGGCATCCCAGCTGACCGTCAGCTC...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGGGTCCGAGGCGCCATaGCTTATGTCTATGGCACTG +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWGSEAP*LMSMAL
Trigger: CAGTGCCATAGACATAAGCCATGGCGCCTCGGACCC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCCGCCTCATCCTCTCTaGATGCTCCGGTTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWPPHPL*MLRFQA
Trigger: TGCTTGGAACCGGAGCATCCAGAGAGGATGAGGCGG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGGAGATGCACCCAACTTaGGCCGGGTCCCCGCCTCAT +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMEMHPT*AGSPPH
Trigger: ATGAGGCGGGGACCCGGCCCAAGTTGGGTGCATCTC...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGAGGATCAGCGCTCTCTaGCTCCCGGAGCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMRISAL*LPEPRD
Trigger: GTCTCTGGGCTCCGGGAGCCAGAGAGCGCTGATCCT...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCCTCCTCCTCTTCCATaGGCCGCAGACCGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSPPPLP*AADRGG
Trigger: TCCTCCGCGGTCTGCGGCCCATGGAAGAGGAGGAGG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGGGTACAGGGTGAGTTaGTGCAGGGGCTCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWGYRVS*CRGSEQ
Trigger: TTGCTCAGAGCCCCTGCACCAACTCACCCTGTACCC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000399914.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGCGAGGAGTGTGCCGTaGTCCATCTTCCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWARSVP*SIFLAS
Trigger: AGAAGCTAGGAAGATGGAGCACGGCACACTCCTCGC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTGCGAGGAGTGTGCCGTaGTCCATCTTCCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTARSVP*SIFLAS
Trigger: AGAAGCTAGGAAGATGGAGCACGGCACACTCCTCGC...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR GCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGGCCTGGGTGGGGCCTaGAGTCTCTCCATGGACCAC +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLGLGGA*SLSMDH
Trigger: GTGGTCCATGGAGAGACTGCAGGCCCCACCCAGGCC...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGCTGGGATGCCCGGTaGGAGGCAATGGCCACCATG +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSSWDAR*EAMATM
Trigger: CATGGTGGCCATTGCCTCGCACCGGGCATCCCAGCT...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGACGGTCAGCTGGGATaGCCGGTGCGAGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLDGQLG*PVRGNG
Trigger: GCCATTGCCTCGCACCGGGCATCCCAGCTGACCGTC...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCTTACCAGGGCGGTCTaGTGCCTGCTGCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWLTRAV*CLLLMK
Trigger: TTTCATGAGCAGCAGGCAGCAGACCGCCCTGGTAAG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTCTTACCAGGGCGGTCTaGTGCCTGCTGCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTLTRAV*CLLLMK
Trigger: TTTCATGAGCAGCAGGCAGCAGACCGCCCTGGTAAG...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCTCATCCTCTCTGGATaGTCCGGTTCCAAGCACGCT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWLILSG*SGSKHA
Trigger: AGCGTGCTTGGAACCGGAGCATCCAGAGAGGATGAG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTACCGAGATACAGCCGCTaGCGGACGCCCGAGAGATGC +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLPRYSR*RTPERC
Trigger: GCATCTCTCGGGCGTCCGGCAGCGGCTGTATCTCGG...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGTTGCTGCCCCGATCTaGAGGAACGTCTCCCTCATT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWVAAPI*RNVSLI
Trigger: AATGAGGGAGACGTTCCTGCAGATCGGGGCAGCAAC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000399914.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGCTGAGGAAAGTTGCTaGCCCGATCTGCAGGAACGT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWAEESC*PDLQER
Trigger: ACGTTCCTGCAGATCGGGGCAGCAACTTTCCTCAGC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399914.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCCAGCTGAGGAAAGTTaGTGCCCCGATCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWPAEES*CPDLQE
Trigger: TTCCTGCAGATCGGGGCAGCAACTTTCCTCAGCTGG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000399914.5
CDS-3UTR CCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGAGGAGTGCCCAGCTaGTGTCCCTGGTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSRGVPS*CPWSRA
Trigger: GGCTCTGGACCAGGGACACCAGCTGGGCACTCCTCT...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGACACCAAGAGCCAGCTaGTCACATGCTCTCCGCGAG +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTTPRAS*SHALRE
Trigger: CTCGCGGAGAGCATGTGACCAGCTGGCTCTTGGTGT...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCTGACGGAGGAGCTATaGGAAGGGCCAAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWLTEEL*EGPKRA
Trigger: TGCTCTCTTTGGCCCTTCCCATAGCTCCTCCGTCAG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGCCCGGTGCGAGGCAATaGCCACCATGTACACAGCAT +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTPGARQ*PPCTQH
Trigger: ATGCTGTGTACATGGTGGCCATTGCCTCGCACCGGG...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGGGTCCGAGGCGCCATaGCTTATGTCTATGGCACTG +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTGSEAP*LMSMAL
Trigger: CAGTGCCATAGACATAAGCCATGGCGCCTCGGACCC...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTACCTCCTCCTCTTCCATaGGCCGCAGACCGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLPPPLP*AADRGG
Trigger: TCCTCCGCGGTCTGCGGCCCATGGAAGAGGAGGAGG...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGAAATCCCTCCGATCCTaGGTACTTGCGGGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMKSLRS*VLAGRS
Trigger: AGACCGCCCCGCAAGTACTCAGGATCGGAGGGATTT...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTTTGGGCATCAGCTCTaGTCCTTGCTGCATGAGAGC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWFGHQL*SLLHES
Trigger: GCTCTCATGCAGCAAGGATCAGAGCTGATGCCCAAA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR TCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTGCGCGTAGTCTGTGGTaGGCACTCTCTGGATCCCCT +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSARSLW*ALSGSP
Trigger: AGGGGATCCAGAGAGTGCTCACCACAGACTACGCGC...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGCCCAGAGACCAGCTaGGGAAAGTTGCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSSPETS*GKLLPR
Trigger: TCGGGGCAGCAACTTTCCTCAGCTGGTCTCTGGGCT...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAAGCTGGGATGCCCGGTaGGAGGCAATGGCCACCATG +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLSWDAR*EAMATM
Trigger: CATGGTGGCCATTGCCTCGCACCGGGCATCCCAGCT...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTTATGTCTATGGCACTaGAGGGAGCTGACGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWLCLWH*RELTVS
Trigger: GCTGACCGTCAGCTCCCTGCAGTGCCATAGACATAA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCGTCCTTTGGTCAGATaGAAAAGTCGGGGGATAGGC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWRPLVR*KSRGIG
Trigger: GCCTATCCCCCGACTTTTGCATCTGACCAAAGGACG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000399914.5
CDS-3UTR CCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAAGAGGAGTGCCCAGCTaGTGTCCCTGGTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLRGVPS*CPWSRA
Trigger: GGCTCTGGACCAGGGACACCAGCTGGGCACTCCTCT...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGACACCAAGAGCCAGCTaGTCACATGCTCTCCGCGAG +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMTPRAS*SHALRE
Trigger: CTCGCGGAGAGCATGTGACCAGCTGGCTCTTGGTGT...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGCTGACGGAGGAGCTATaGGAAGGGCCAAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTLTEEL*EGPKRA
Trigger: TGCTCTCTTTGGCCCTTCCCATAGCTCCTCCGTCAG...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAAGTCTCGGGCCTGGGTaGGGCCTGCAGTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLSLGPG*GLQSLH
Trigger: ATGGAGAGACTGCAGGCCCCACCCAGGCCCGAGACT...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCATGGCTTATGTCTATaGCACTGCAGGGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWHGLCL*HCRELT
Trigger: CGTCAGCTCCCTGCAGTGCCATAGACATAAGCCATG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGGGGTCCGAGGCGCCATaGCTTATGTCTATGGCACTG +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMGSEAP*LMSMAL
Trigger: CAGTGCCATAGACATAAGCCATGGCGCCTCGGACCC...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCATACTCAATGCTGGTaGACTCCATCAGCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWHTQCW*TPSAAR
Trigger: ACGCGCTGCTGATGGAGTCCACCAGCATTGAGTATG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGCCGCCTCATCCTCTCTaGATGCTCCGGTTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMPPHPL*MLRFQA
Trigger: TGCTTGGAACCGGAGCATCCAGAGAGGATGAGGCGG...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTGGACCACTTCTCAATaGTGGATGACACGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWWTTSQ*WMTREG
Trigger: ACCCTCACGTGTCATCCATCATTGAGAAGTGGTCCA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR TCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGTTTGGAGAAGTCAATaGCTTTCTCCCGCACGTAGG +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWVWRSQ*LSPARR
Trigger: CCTACGTGCGGGAGAAAGTCATTGACTTCTCCAAAC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR TCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTGTTTGGAGAAGTCAATaGCTTTCTCCCGCACGTAGG +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTVWRSQ*LSPARR
Trigger: CCTACGTGCGGGAGAAAGTCATTGACTTCTCCAAAC...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR TCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCTGGAGACAGGGGGTTaGGGAAGGAGAAAACGCCTG +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSLETGG*GRRKRL
Trigger: CAGGCGTTTTCTCCTTCCTCAACCCCCTGTCTCCAG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCAAAGAGTACACAGCTaGCTCCCAAGCAGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWQRVHS*LPSRLR
Trigger: TCTTAGCCTGCTTGGGAGTCAGCTGTGTACTCTTTG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR TCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTCAAAGAGTACACAGCTaGCTCCCAAGCAGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTQRVHS*LPSRLR
Trigger: TCTTAGCCTGCTTGGGAGTCAGCTGTGTACTCTTTG...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR TCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGTTTGGGCATCAGCTCTaGTCCTTGCTGCATGAGAGC +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTFGHQL*SLLHES
Trigger: GCTCTCATGCAGCAAGGATCAGAGCTGATGCCCAAA...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR TCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGAAGAAGGTCATTGTTaGTCCATCTCTAACCGCCCC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWEEGHC*SISNRP
Trigger: GGGGCGGTTAGAGATGGATCAACAATGACCTTCTTC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR TCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGCGCGTAGTCTGTGGTaGGCACTCTCTGGATCCCCT +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLARSLW*ALSGSP
Trigger: AGGGGATCCAGAGAGTGCTCACCACAGACTACGCGC...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAAGCCCAGAGACCAGCTaGGGAAAGTTGCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLSPETS*GKLLPR
Trigger: TCGGGGCAGCAACTTTCCTCAGCTGGTCTCTGGGCT...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGGCGAGGAGTGTGCCGTaGTCCATCTTCCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMARSVP*SIFLAS
Trigger: AGAAGCTAGGAAGATGGAGCACGGCACACTCCTCGC...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp ATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACTTATGTCTATGGCACTaGAGGGAGCTGACGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ISPTEMIQTLIGLSRHTDLCLWH*RELTVS
Trigger: GCTGACCGTCAGCTCCCTGCAGTGCCATAGACATAA...GTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR GCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGGTTGCTGCCCCGATCTaGAGGAACGTCTCCCTCATT +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMVAAPI*RNVSLI
Trigger: AATGAGGGAGACGTTCCTGCAGATCGGGGCAGCAAC...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGCCAGCTGAGGAAAGTTaGTGCCCCGATCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMPAEES*CPDLQE
Trigger: TTCCTGCAGATCGGGGCAGCAACTTTCCTCAGCTGG...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTACACCAAGAGCCAGCTaGTCACATGCTCTCCGCGAG +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSTPRAS*SHALRE
Trigger: CTCGCGGAGAGCATGTGACCAGCTGGCTCTTGGTGT...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGCTGACGGAGGAGCTATaGGAAGGGCCAAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMLTEEL*EGPKRA
Trigger: TGCTCTCTTTGGCCCTTCCCATAGCTCCTCCGTCAG...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCCCGGTGCGAGGCAATaGCCACCATGTACACAGCAT +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSPGARQ*PPCTQH
Trigger: ATGCTGTGTACATGGTGGCCATTGCCTCGCACCGGG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp ATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACCATGGCTTATGTCTATaGCACTGCAGGGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: ISPTEMIQTLIGLSRHTDHGLCL*HCRELT
Trigger: CGTCAGCTCCCTGCAGTGCCATAGACATAAGCCATG...GTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTGGGTCCGAGGCGCCATaGCTTATGTCTATGGCACTG +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSGSEAP*LMSMAL
Trigger: CAGTGCCATAGACATAAGCCATGGCGCCTCGGACCC...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTCCCCTTTGTCATTCTaGGCCCCATATTTGCCATCG +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWSPLSF*APYLPS
Trigger: CGATGGCAAATATGGGGCCCAGAATGACAAAGGGGA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTTCCCCTTTGTCATTCTaGGCCCCATATTTGCCATCG +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTSPLSF*APYLPS
Trigger: CGATGGCAAATATGGGGCCCAGAATGACAAAGGGGA...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCTGGATTGGTACCATTaGGCTTCCGGTAGAGAATGC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWLDWYH*ASGREC
Trigger: GCATTCTCTACCGGAAGCCCAATGGTACCAATCCAG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGTGGTGAGCACTCTCTaGATCCCCTCATCACTGTTT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWVVSTL*IPSSLF
Trigger: AAACAGTGATGAGGGGATCCAGAGAGTGCTCACCAC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp ATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACCATACTCAATGCTGGTaGACTCCATCAGCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: ISPTEMIQTLIGLSRHTDHTQCW*TPSAAR
Trigger: ACGCGCTGCTGATGGAGTCCACCAGCATTGAGTATG...GTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCTACAGGCGTTTCCTTaGATCACGCCACAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWLQAFP*ITPQSL
Trigger: AAGAGACTGTGGCGTGATCCAAGGAAACGCCTGTAG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCCGCCTCATCCTCTCTaGATGCTCCGGTTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSPPHPL*MLRFQA
Trigger: TGCTTGGAACCGGAGCATCCAGAGAGGATGAGGCGG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCCCTCATTCGTCCTTTaGTCAGATGCAAAAGTCGGG +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWPSFVL*SDAKVG
Trigger: CCCGACTTTTGCATCTGACCAAAGGACGAATGAGGG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000399914.5
CDS-3UTR TCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAAAATCCCTCCGATCCTaGGTACTTGCGGGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLKSLRS*VLAGRS
Trigger: AGACCGCCCCGCAAGTACTCAGGATCGGAGGGATTT...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGTGGACCACTTCTCAATaGTGGATGACACGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTWTTSQ*WMTREG
Trigger: ACCCTCACGTGTCATCCATCATTGAGAAGTGGTCCA...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR TCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTACTGGAGACAGGGGGTTaGGGAAGGAGAAAACGCCTG +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLLETGG*GRRKRL
Trigger: CAGGCGTTTTCTCCTTCCTCAACCCCCTGTCTCCAG...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTTTGGGCATCAGCTCTaGTCCTTGCTGCATGAGAGC +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMFGHQL*SLLHES
Trigger: GCTCTCATGCAGCAAGGATCAGAGCTGATGCCCAAA...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp ATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACGAAGAAGGTCATTGTTaGTCCATCTCTAACCGCCCC +
Preference number: 4 (lower is better)
Translates to: ISPTEMIQTLIGLSRHTDEEGHC*SISNRP
Trigger: GGGGCGGTTAGAGATGGATCAACAATGACCTTCTTC...GTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR GCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTGCGAGGAGTGTGCCGTaGTCCATCTTCCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSARSVP*SIFLAS
Trigger: AGAAGCTAGGAAGATGGAGCACGGCACACTCCTCGC...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCGCCCTGCTGATAGCTaGATAATCTGGGTAAAGGTT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWRPADS*IIWVKV
Trigger: AACCTTTACCCAGATTATGCAGCTATCAGCAGGGCG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGATCAGCTCTGATCCTTaGTGCATGAGAGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWISSDP*CMRAPT
Trigger: AGTTGGAGCTCTCATGCAGCAAGGATCAGAGCTGAT...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTATCAGCTCTGATCCTTaGTGCATGAGAGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTISSDP*CMRAPT
Trigger: AGTTGGAGCTCTCATGCAGCAAGGATCAGAGCTGAT...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCTTTGCCAGATCATCTaGCGAATCTATGGGGGATTC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWLCQII*RIYGGF
Trigger: GAATCCCCCATAGATTCGGCAGATGATCTGGCAAAG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCTTACCAGGGCGGTCTaGTGCCTGCTGCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSLTRAV*CLLLMK
Trigger: TTTCATGAGCAGCAGGCAGCAGACCGCCCTGGTAAG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCTCATCCTCTCTGGATaGTCCGGTTCCAAGCACGCT +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSLILSG*SGSKHA
Trigger: AGCGTGCTTGGAACCGGAGCATCCAGAGAGGATGAG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCCAGCTGAGGAAAGTTaGTGCCCCGATCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSPAEES*CPDLQE
Trigger: TTCCTGCAGATCGGGGCAGCAACTTTCCTCAGCTGG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTACCCGGTGCGAGGCAATaGCCACCATGTACACAGCAT +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLPGARQ*PPCTQH
Trigger: ATGCTGTGTACATGGTGGCCATTGCCTCGCACCGGG...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGCATGGCTTATGTCTATaGCACTGCAGGGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMHGLCL*HCRELT
Trigger: CGTCAGCTCCCTGCAGTGCCATAGACATAAGCCATG...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp ATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACCTGGATTGGTACCATTaGGCTTCCGGTAGAGAATGC +
Preference number: 4 (lower is better)
Translates to: ISPTEMIQTLIGLSRHTDLDWYH*ASGREC
Trigger: GCATTCTCTACCGGAAGCCCAATGGTACCAATCCAG...GTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTCCCTCCAACTATTCTaGTCGATAGAGCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWSLQLF*SIELWA
Trigger: TGCCCAAAGCTCTATCGACCAGAATAGTTGGAGGGA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGTGGTGAGCACTCTCTaGATCCCCTCATCACTGTTT +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTVVSTL*IPSSLF
Trigger: AAACAGTGATGAGGGGATCCAGAGAGTGCTCACCAC...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR TCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGATGATGGATGACACGTaGGGGTTGTCAATGTTAAGC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWMMDDT*GLSMLS
Trigger: GCTTAACATTGACAACCCTCACGTGTCATCCATCAT...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR TCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTATGATGGATGACACGTaGGGGTTGTCAATGTTAAGC +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTMMDDT*GLSMLS
Trigger: GCTTAACATTGACAACCCTCACGTGTCATCCATCAT...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR TCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCTTCTCAATGATGGATaGCACGTGAGGGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWLLNDG*HVRVVN
Trigger: ATTGACAACCCTCACGTGTCATCCATCATTGAGAAG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR TCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGGTTTGGAGAAGTCAATaGCTTTCTCCCGCACGTAGG +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMVWRSQ*LSPARR
Trigger: CCTACGTGCGGGAGAAAGTCATTGACTTCTCCAAAC...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTTTTGGGCATCAGCTCTaGTCCTTGCTGCATGAGAGC +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSFGHQL*SLLHES
Trigger: GCTCTCATGCAGCAAGGATCAGAGCTGATGCCCAAA...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGGAAGAAGGTCATTGTTaGTCCATCTCTAACCGCCCC +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMEEGHC*SISNRP
Trigger: GGGGCGGTTAGAGATGGATCAACAATGACCTTCTTC...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGACGAATTAGACCTGTaGTGTCTTCATACACCACTG +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWDELDL*CLHTPL
Trigger: CAGTGGTGTATGAAGACAGCACAGGTCTAATTCGTC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTGACGAATTAGACCTGTaGTGTCTTCATACACCACTG +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTDELDL*CLHTPL
Trigger: CAGTGGTGTATGAAGACAGCACAGGTCTAATTCGTC...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCTTCAGTTGTCATCATaGCATCCAAAAGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWLQLSS*HPKGQS
Trigger: AGACTGGCCTTTTGGATGGCATGATGACAACTGAAG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTCTTCAGTTGTCATCATaGCATCCAAAAGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTLQLSS*HPKGQS
Trigger: AGACTGGCCTTTTGGATGGCATGATGACAACTGAAG...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR GCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTTTATGTCTATGGCACTaGAGGGAGCTGACGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSLCLWH*RELTVS
Trigger: GCTGACCGTCAGCTCCCTGCAGTGCCATAGACATAA...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp ATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACCTTTGCCAGATCATCTaGCGAATCTATGGGGGATTC +
Preference number: 4 (lower is better)
Translates to: ISPTEMIQTLIGLSRHTDLCQII*RIYGGF
Trigger: GAATCCCCCATAGATTCGGCAGATGATCTGGCAAAG...GTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR GCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTACTTACCAGGGCGGTCTaGTGCCTGCTGCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLLTRAV*CLLLMK
Trigger: TTTCATGAGCAGCAGGCAGCAGACCGCCCTGGTAAG...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGAGGTTGCAGTTTCTCTaGGTCACATACTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWRLQFL*VTYSML
Trigger: CAGCATTGAGTATGTGACGCAGAGAAACTGCAACCT...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTAGGTTGCAGTTTCTCTaGGTCACATACTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTRLQFL*VTYSML
Trigger: CAGCATTGAGTATGTGACGCAGAGAAACTGCAACCT...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR GCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTACTCATCCTCTCTGGATaGTCCGGTTCCAAGCACGCT +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLLILSG*SGSKHA
Trigger: AGCGTGCTTGGAACCGGAGCATCCAGAGAGGATGAG...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCGTCCTTTGGTCAGATaGAAAAGTCGGGGGATAGGC +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSRPLVR*KSRGIG
Trigger: GCCTATCCCCCGACTTTTGCATCTGACCAAAGGACG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGCTGAGGAAAGTTGCTaGCCCGATCTGCAGGAACGT +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLAEESC*PDLQER
Trigger: ACGTTCCTGCAGATCGGGGCAGCAACTTTCCTCAGC...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCATGGCTTATGTCTATaGCACTGCAGGGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSHGLCL*HCRELT
Trigger: CGTCAGCTCCCTGCAGTGCCATAGACATAAGCCATG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGCTGGATTGGTACCATTaGGCTTCCGGTAGAGAATGC +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMLDWYH*ASGREC
Trigger: GCATTCTCTACCGGAAGCCCAATGGTACCAATCCAG...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp ATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACTCCCTCCAACTATTCTaGTCGATAGAGCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: ISPTEMIQTLIGLSRHTDSLQLF*SIELWA
Trigger: TGCCCAAAGCTCTATCGACCAGAATAGTTGGAGGGA...GTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCATCTGCCGAATCTATaGGGGATTCCATTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWHLPNL*GIPFSL
Trigger: TAGAGAGAATGGAATCCCCCATAGATTCGGCAGATG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGGTGGTGAGCACTCTCTaGATCCCCTCATCACTGTTT +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMVVSTL*IPSSLF
Trigger: AAACAGTGATGAGGGGATCCAGAGAGTGCTCACCAC...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCATACTCAATGCTGGTaGACTCCATCAGCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSHTQCW*TPSAAR
Trigger: ACGCGCTGCTGATGGAGTCCACCAGCATTGAGTATG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGCCCTCATTCGTCCTTTaGTCAGATGCAAAAGTCGGG +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMPSFVL*SDAKVG
Trigger: CCCGACTTTTGCATCTGACCAAAGGACGAATGAGGG...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGCTTCTCAATGATGGATaGCACGTGAGGGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTLLNDG*HVRVVN
Trigger: ATTGACAACCCTCACGTGTCATCCATCATTGAGAAG...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR TCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTTGGACCACTTCTCAATaGTGGATGACACGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSWTTSQ*WMTREG
Trigger: ACCCTCACGTGTCATCCATCATTGAGAAGTGGTCCA...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTGGCCAATGAATCAGTaGTATTGCTGGACTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWWPMNQ*YCWTCL
Trigger: AAGACAAGTCCAGCAATATCACTGATTCATTGGCCA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR TCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTGTTCTGTTGGCCAATaGATCAGTGATATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWCSVGQ*ISDIAG
Trigger: TCCAGCAATATCACTGATTCATTGGCCAACAGAACA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR TCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGAAACCCAGGATGTTTaGCAATTCTTTCAACAGGTC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWETQDV*QFFQQV
Trigger: GACCTGTTGAAAGAATTGTCAAACATCCTGGGTTTC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR TCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCAAAGAGTACACAGCTaGCTCCCAAGCAGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSQRVHS*LPSRLR
Trigger: TCTTAGCCTGCTTGGGAGTCAGCTGTGTACTCTTTG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTGAAGAAGGTCATTGTTaGTCCATCTCTAACCGCCCC +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSEEGHC*SISNRP
Trigger: GGGGCGGTTAGAGATGGATCAACAATGACCTTCTTC...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTTATTAAAGGTGATATaGCCAGTCAAGCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWLLKVI*PVKPSH
Trigger: GTGGGATGGCTTGACTGGGCATATCACCTTTAATAA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGATCAGCTCTGATCCTTaGTGCATGAGAGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMISSDP*CMRAPT
Trigger: AGTTGGAGCTCTCATGCAGCAAGGATCAGAGCTGAT...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTATCTTGGTTTGCTTTaGCAGATCATCTGCCGAATC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWYLGLL*QIICRI
Trigger: GATTCGGCAGATGATCTGGCAAAGCAAACCAAGATA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTACGTCCTTTGGTCAGATaGAAAAGTCGGGGGATAGGC +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLRPLVR*KSRGIG
Trigger: GCCTATCCCCCGACTTTTGCATCTGACCAAAGGACG...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTTCCCAGAGGGCAGCTaGCGGATTTTGATTTTAATA +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWFPEGS*RILILI
Trigger: TATTAAAATCAAAATCCGCCAGCTGCCCTCTGGGAA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTTTCCCAGAGGGCAGCTaGCGGATTTTGATTTTAATA +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTFPEGS*RILILI
Trigger: TATTAAAATCAAAATCCGCCAGCTGCCCTCTGGGAA...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTTCCCCTTTGTCATTCTaGGCCCCATATTTGCCATCG +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSSPLSF*APYLPS
Trigger: CGATGGCAAATATGGGGCCCAGAATGACAAAGGGGA...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGATACATCCAAATATCTaGAGACAGGGGGTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWIHPNI*RQGVEE
Trigger: TTCCTCAACCCCCTGTCTCCAGATATTTGGATGTAT...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCCCTCCAACTATTCTaGTCGATAGAGCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMSLQLF*SIELWA
Trigger: TGCCCAAAGCTCTATCGACCAGAATAGTTGGAGGGA...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGCATCTGCCGAATCTATaGGGGATTCCATTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTHLPNL*GIPFSL
Trigger: TAGAGAGAATGGAATCCCCCATAGATTCGGCAGATG...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTACATACTCAATGCTGGTaGACTCCATCAGCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLHTQCW*TPSAAR
Trigger: ACGCGCTGCTGATGGAGTCCACCAGCATTGAGTATG...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCCCTCATTCGTCCTTTaGTCAGATGCAAAAGTCGGG +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSPSFVL*SDAKVG
Trigger: CCCGACTTTTGCATCTGACCAAAGGACGAATGAGGG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGATGATGGATGACACGTaGGGGTTGTCAATGTTAAGC +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMMMDDT*GLSMLS
Trigger: GCTTAACATTGACAACCCTCACGTGTCATCCATCAT...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATGGACCACTTCTCAATaGTGGATGACACGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLWTTSQ*WMTREG
Trigger: ACCCTCACGTGTCATCCATCATTGAGAAGTGGTCCA...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp ATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACTGGCCAATGAATCAGTaGTATTGCTGGACTTGTCTT +
Preference number: 4 (lower is better)
Translates to: ISPTEMIQTLIGLSRHTDWPMNQ*YCWTCL
Trigger: AAGACAAGTCCAGCAATATCACTGATTCATTGGCCA...GTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR TCA 90 bp ATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACTGTTCTGTTGGCCAATaGATCAGTGATATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ISPTEMIQTLIGLSRHTDCSVGQ*ISDIAG
Trigger: TCCAGCAATATCACTGATTCATTGGCCAACAGAACA...GTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR TCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGAAACCCAGGATGTTTaGCAATTCTTTCAACAGGTC +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTETQDV*QFFQQV
Trigger: GACCTGTTGAAAGAATTGTCAAACATCCTGGGTTTC...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR TCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGTTTGGAGAAGTCAATaGCTTTCTCCCGCACGTAGG +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLVWRSQ*LSPARR
Trigger: CCTACGTGCGGGAGAAAGTCATTGACTTCTCCAAAC...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTTTCTGATTCTTCAGTaGGATTCCCAGTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWFLILQ*DSQFFH
Trigger: ATGGAAGAACTGGGAATCTCACTGAAGAATCAGAAA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR TCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGAGTCATTTCCCCCACTaGGATGATCCAAACATTGAT +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTSHFPH*DDPNID
Trigger: ATCAATGTTTGGATCATCTCAGTGGGGGAAATGACT...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR GCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGGACGAATTAGACCTGTaGTGTCTTCATACACCACTG +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMDELDL*CLHTPL
Trigger: CAGTGGTGTATGAAGACAGCACAGGTCTAATTCGTC...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGTTATTAAAGGTGATATaGCCAGTCAAGCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTLLKVI*PVKPSH
Trigger: GTGGGATGGCTTGACTGGGCATATCACCTTTAATAA...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGTAGGGTGTAAACCTTaGAATCACAAAGAGTACACA +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWVGCKP*NHKEYT
Trigger: TGTGTACTCTTTGTGATTGCAAGGTTTACACCCTAC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTGTAGGGTGTAAACCTTaGAATCACAAAGAGTACACA +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTVGCKP*NHKEYT
Trigger: TGTGTACTCTTTGTGATTGCAAGGTTTACACCCTAC...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR GCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATCAGCTCTGATCCTTaGTGCATGAGAGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSISSDP*CMRAPT
Trigger: AGTTGGAGCTCTCATGCAGCAAGGATCAGAGCTGAT...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCTTTGCCAGATCATCTaGCGAATCTATGGGGGATTC +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSLCQII*RIYGGF
Trigger: GAATCCCCCATAGATTCGGCAGATGATCTGGCAAAG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp ATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACTATCTTGGTTTGCTTTaGCAGATCATCTGCCGAATC +
Preference number: 4 (lower is better)
Translates to: ISPTEMIQTLIGLSRHTDYLGLL*QIICRI
Trigger: GATTCGGCAGATGATCTGGCAAAGCAAACCAAGATA...GTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR GCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTATTCTATCTTGGTTTaGTTTGCCAGATCATCTGCC +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWYSILV*FARSSA
Trigger: GGCAGATGATCTGGCAAAGCAAACCAAGATAGAATA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR GCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTTATTCTATCTTGGTTTaGTTTGCCAGATCATCTGCC +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTYSILV*FARSSA
Trigger: GGCAGATGATCTGGCAAAGCAAACCAAGATAGAATA...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR GCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGAGGTTGCAGTTTCTCTaGGTCACATACTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMRLQFL*VTYSML
Trigger: CAGCATTGAGTATGTGACGCAGAGAAACTGCAACCT...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGATACATCCAAATATCTaGAGACAGGGGGTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTIHPNI*RQGVEE
Trigger: TTCCTCAACCCCCTGTCTCCAGATATTTGGATGTAT...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGCATCTGCCGAATCTATaGGGGATTCCATTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMHLPNL*GIPFSL
Trigger: TAGAGAGAATGGAATCCCCCATAGATTCGGCAGATG...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGTGGTGAGCACTCTCTaGATCCCCTCATCACTGTTT +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLVVSTL*IPSSLF
Trigger: AAACAGTGATGAGGGGATCCAGAGAGTGCTCACCAC...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGATAAGTCCAGGGTTGTaGAAAAGTAGTGATAGTACT +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWISPGL*KSSDST
Trigger: AGTACTATCACTACTTTTTCACAACCCTGGACTTAT...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR TCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATGATGGATGACACGTaGGGGTTGTCAATGTTAAGC +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSMMDDT*GLSMLS
Trigger: GCTTAACATTGACAACCCTCACGTGTCATCCATCAT...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCTTCTCAATGATGGATaGCACGTGAGGGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSLLNDG*HVRVVN
Trigger: ATTGACAACCCTCACGTGTCATCCATCATTGAGAAG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGGAAACCCAGGATGTTTaGCAATTCTTTCAACAGGTC +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMETQDV*QFFQQV
Trigger: GACCTGTTGAAAGAATTGTCAAACATCCTGGGTTTC...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTGACGAATTAGACCTGTaGTGTCTTCATACACCACTG +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSDELDL*CLHTPL
Trigger: CAGTGGTGTATGAAGACAGCACAGGTCTAATTCGTC...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTACTTTGCCAGATCATCTaGCGAATCTATGGGGGATTC +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLLCQII*RIYGGF
Trigger: GAATCCCCCATAGATTCGGCAGATGATCTGGCAAAG...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTATCTTGGTTTGCTTTaGCAGATCATCTGCCGAATC +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMYLGLL*QIICRI
Trigger: GATTCGGCAGATGATCTGGCAAAGCAAACCAAGATA...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGGTTGCAGTTTCTCTaGGTCACATACTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSRLQFL*VTYSML
Trigger: CAGCATTGAGTATGTGACGCAGAGAAACTGCAACCT...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATCCCTCCAACTATTCTaGTCGATAGAGCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLSLQLF*SIELWA
Trigger: TGCCCAAAGCTCTATCGACCAGAATAGTTGGAGGGA...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCATCTGCCGAATCTATaGGGGATTCCATTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSHLPNL*GIPFSL
Trigger: TAGAGAGAATGGAATCCCCCATAGATTCGGCAGATG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTTTCCAGAAGTGGAGTTaGTTGGATGGGTTTGCTTAC +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSFQKWS*LDGFAY
Trigger: GTAAGCAAACCCATCCAACCAACTCCACTTCTGGAA...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTACTTCTCAATGATGGATaGCACGTGAGGGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLLLNDG*HVRVVN
Trigger: ATTGACAACCCTCACGTGTCATCCATCATTGAGAAG...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTTGGCCAATGAATCAGTaGTATTGCTGGACTTGTCTT +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSWPMNQ*YCWTCL
Trigger: AAGACAAGTCCAGCAATATCACTGATTCATTGGCCA...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTTGTTCTGTTGGCCAATaGATCAGTGATATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSCSVGQ*ISDIAG
Trigger: TCCAGCAATATCACTGATTCATTGGCCAACAGAACA...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGACTGATTACACAGTATaGACTGAGGACTGTTTTCGA +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMTDYTV*TEDCFR
Trigger: TCGAAAACAGTCCTCAGTTCATACTGTGTAATCAGT...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTACTTCAGTTGTCATCATaGCATCCAAAAGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLLQLSS*HPKGQS
Trigger: AGACTGGCCTTTTGGATGGCATGATGACAACTGAAG...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTTTATTAAAGGTGATATaGCCAGTCAAGCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSLLKVI*PVKPSH
Trigger: GTGGGATGGCTTGACTGGGCATATCACCTTTAATAA...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGGTAGGGTGTAAACCTTaGAATCACAAAGAGTACACA +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMVGCKP*NHKEYT
Trigger: TGTGTACTCTTTGTGATTGCAAGGTTTACACCCTAC...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTATTCTATCTTGGTTTaGTTTGCCAGATCATCTGCC +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMYSILV*FARSSA
Trigger: GGCAGATGATCTGGCAAAGCAAACCAAGATAGAATA...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTTTATACCCCTAATATaGCCCTGCTTCAACATACAG +
Preference number: 4 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMFIPLI*PCFNIQ
Trigger: CTGTATGTTGAAGCAGGGGCATATTAGGGGTATAAA...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGATAGCTGCATAATCTaGGTAAAGGTTGATGTAAAA +
Preference number: 4 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWDSCII*VKVDVK
Trigger: TTTTACATCAACCTTTACCCAGATTATGCAGCTATC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CCA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTGATAGCTGCATAATCTaGGTAAAGGTTGATGTAAAA +
Preference number: 4 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTDSCII*VKVDVK
Trigger: TTTTACATCAACCTTTACCCAGATTATGCAGCTATC...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTTTCCCAGAGGGCAGCTaGCGGATTTTGATTTTAATA +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSFPEGS*RILILI
Trigger: TATTAAAATCAAAATCCGCCAGCTGCCCTCTGGGAA...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATACATCCAAATATCTaGAGACAGGGGGTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSIHPNI*RQGVEE
Trigger: TTCCTCAACCCCCTGTCTCCAGATATTTGGATGTAT...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGTGGAGTTGGTTGGATaGGTTTGCTTACATTGCAGT +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLVELVG*VCLHCS
Trigger: ACTGCAATGTAAGCAAACCCATCCAACCAACTCCAC...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATGGCCAATGAATCAGTaGTATTGCTGGACTTGTCTT +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLWPMNQ*YCWTCL
Trigger: AAGACAAGTCCAGCAATATCACTGATTCATTGGCCA...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATGTTCTGTTGGCCAATaGATCAGTGATATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLCSVGQ*ISDIAG
Trigger: TCCAGCAATATCACTGATTCATTGGCCAACAGAACA...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGAAACCCAGGATGTTTaGCAATTCTTTCAACAGGTC +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLETQDV*QFFQQV
Trigger: GACCTGTTGAAAGAATTGTCAAACATCCTGGGTTTC...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR TCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATTACACAGTATGAACTaGGGACTGTTTTCGAATCCC +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLLHSMN*GLFSNP
Trigger: GGGATTCGAAAACAGTCCTCAGTTCATACTGTGTAA...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATTATTAAAGGTGATATaGCCAGTCAAGCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLLLKVI*PVKPSH
Trigger: GTGGGATGGCTTGACTGGGCATATCACCTTTAATAA...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTGTAGGGTGTAAACCTTaGAATCACAAAGAGTACACA +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSVGCKP*NHKEYT
Trigger: TGTGTACTCTTTGTGATTGCAAGGTTTACACCCTAC...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATATCTTGGTTTGCTTTaGCAGATCATCTGCCGAATC +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLYLGLL*QIICRI
Trigger: GATTCGGCAGATGATCTGGCAAAGCAAACCAAGATA...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATTCCCAGAGGGCAGCTaGCGGATTTTGATTTTAATA +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLFPEGS*RILILI
Trigger: TATTAAAATCAAAATCCGCCAGCTGCCCTCTGGGAA...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAATACATCCAAATATCTaGAGACAGGGGGTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLIHPNI*RQGVEE
Trigger: TTCCTCAACCCCCTGTCTCCAGATATTTGGATGTAT...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAAGAAGTGGAGTTGGTTaGATGGGTTTGCTTACATTG +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLRSGVG*MGLLTL
Trigger: CAATGTAAGCAAACCCATCCAACCAACTCCACTTCT...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR GCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATTTATACCCCTAATATaGCCCTGCTTCAACATACAG +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLFIPLI*PCFNIQ
Trigger: CTGTATGTTGAAGCAGGGGCATATTAGGGGTATAAA...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTGATAGCTGCATAATCTaGGTAAAGGTTGATGTAAAA +
Preference number: 4 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSDSCII*VKVDVK
Trigger: TTTTACATCAACCTTTACCCAGATTATGCAGCTATC...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CCA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGATAGCTGCATAATCTaGGTAAAGGTTGATGTAAAA +
Preference number: 4 (lower is better)
Translates to: PASTYSASIFPVYSFQCLDSCII*VKVDVK
Trigger: TTTTACATCAACCTTTACCCAGATTATGCAGCTATC...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS GCA 90 bp GGGTCCCCGCCTCATCCTCTCTGGATGCTCCGGTTCCAAGCACGCTaGGCGCTCCCCACGGAGCGAGCTCGAGGGAACCCGCGTGGGACC +
Preference number: 5 (lower is better)
Translates to: GSPPHPLWMLRFQAR*ALPTERARGNPRGT
Trigger: GGTCCCACGCGGGTTCCCTCGAGCTCGCTCCGTGGGGAGCGCGCAGCGTGCTTGGAACCGGAGCATCCAGAGAGGATGAGGCGGGGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS TCA 90 bp AGCTCGAGGGAACCCGCGTGGGACCGCGGAGCTGGCTGGCAAGGCTaGGCTCTCTCGGGGCTCCTCAGTGCTGTCGCTAGCCCATCACGG +
Preference number: 5 (lower is better)
Translates to: SSREPAWDRGAGWQG*ALSGLLSAVASPSR
Trigger: CCGTGATGGGCTAGCGACAGCACTGAGGAGCCCCGAGAGAGCTCAGCCTTGCCAGCCAGCTCCGCGGTCCCACGCGGGTTCCCTCGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399907.5
ENST00000399909.5
ENST00000399914.5
ENST00000472429.1
CDS GCA 90 bp AGATGCACCCAACTTGGGCCGGGTCCCCGCCTCATCCTCTCTGGATaGTCCGGTTCCAAGCACGCTGCGCGCTCCCCACGGAGCGAGCTC +
Preference number: 5 (lower is better)
Translates to: RCTQLGPGPRLILSG*SGSKHAARSPRSEL
Trigger: GAGCTCGCTCCGTGGGGAGCGCGCAGCGTGCTTGGAACCGGAGCATCCAGAGAGGATGAGGCGGGGACCCGGCCCAAGTTGGGTGCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS CCA 90 bp CGAGAGATGCACCCAACTTGGGCCGGGTCCCCGCCTCATCCTCTCTaGATGCTCCGGTTCCAAGCACGCTGCGCGCTCCCCACGGAGCGA +
Preference number: 5 (lower is better)
Translates to: REMHPTWAGSPPHPL*MLRFQARCALPTER
Trigger: TCGCTCCGTGGGGAGCGCGCAGCGTGCTTGGAACCGGAGCATCCAGAGAGGATGAGGCGGGGACCCGGCCCAAGTTGGGTGCATCTCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS CCA 90 bp GCCGAGATACAGCCGCTGCCGGACGCCCGAGAGATGCACCCAACTTaGGCCGGGTCCCCGCCTCATCCTCTCTGGATGCTCCGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: AEIQPLPDAREMHPT*AGSPPHPLWMLRFQ
Trigger: TTGGAACCGGAGCATCCAGAGAGGATGAGGCGGGGACCCGGCCCAAGTTGGGTGCATCTCTCGGGCGTCCGGCAGCGGCTGTATCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS GCA 90 bp TTGCGGGGCGGTCTGAGGGAGGATATAGCAGAGGAAATAGAGGAGTaGCCAGCTGGTGTCCCTGGTCCAGAGCCCGGGCTGGGCGAGGAG +
Preference number: 5 (lower is better)
Translates to: LRGGLREDIAEEIEE*PAGVPGPEPGLGEE
Trigger: CTCCTCGCCCAGCCCGGGCTCTGGACCAGGGACACCAGCTGGGCACTCCTCTATTTCCTCTGCTATATCCTCCCTCAGACCGCCCCGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327783.8
ENST00000389124.6
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS TCA 90 bp CGCGGAGGATCAGCGCTCTCTGGCTCCCGGAGCCCAGAGACCAGCTaGGGAAAGTTGCTGCCCCGATCTGCAGGAACGTCTCCCTCATTC +
Preference number: 5 (lower is better)
Translates to: RGGSALSGSRSPETS*GKLLPRSAGTSPSF
Trigger: GAATGAGGGAGACGTTCCTGCAGATCGGGGCAGCAACTTTCCTCAGCTGGTCTCTGGGCTCCGGGAGCCAGAGAGCGCTGATCCTCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399907.5
ENST00000399909.5
ENST00000399914.5
ENST00000472429.1
CDS CCA 90 bp CGGTCTGAGGGAGGATATAGCAGAGGAAATAGAGGAGTGCCCAGCTaGTGTCCCTGGTCCAGAGCCCGGGCTGGGCGAGGAGTGTGCCGT +
Preference number: 5 (lower is better)
Translates to: RSEGGYSRGNRGVPS*CPWSRARAGRGVCR
Trigger: ACGGCACACTCCTCGCCCAGCCCGGGCTCTGGACCAGGGACACCAGCTGGGCACTCCTCTATTTCCTCTGCTATATCCTCCCTCAGACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327783.8
ENST00000389124.6
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS CCA 90 bp GGAGGATATAGCAGAGGAAATAGAGGAGTGCCCAGCTGGTGTCCCTaGTCCAGAGCCCGGGCTGGGCGAGGAGTGTGCCGTGCTCCATCT +
Preference number: 5 (lower is better)
Translates to: GGYSRGNRGVPSWCP*SRARAGRGVCRAPS
Trigger: AGATGGAGCACGGCACACTCCTCGCCCAGCCCGGGCTCTGGACCAGGGACACCAGCTGGGCACTCCTCTATTTCCTCTGCTATATCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327783.8
ENST00000389124.6
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS GCA 90 bp CGCTCTCTGGCTCCCGGAGCCCAGAGACCAGCTGAGGAAAGTTGCTaGCCCGATCTGCAGGAACGTCTCCCTCATTCGTCCTTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: RSLAPGAQRPAEESC*PDLQERLPHSSFGQ
Trigger: CTGACCAAAGGACGAATGAGGGAGACGTTCCTGCAGATCGGGGCAGCAACTTTCCTCAGCTGGTCTCTGGGCTCCGGGAGCCAGAGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399907.5
ENST00000399909.5
ENST00000399914.5
ENST00000472429.1
CDS GCA 90 bp CAGCGCTCTCTGGCTCCCGGAGCCCAGAGACCAGCTGAGGAAAGTTaGTGCCCCGATCTGCAGGAACGTCTCCCTCATTCGTCCTTTGGT +
Preference number: 5 (lower is better)
Translates to: QRSLAPGAQRPAEES*CPDLQERLPHSSFG
Trigger: ACCAAAGGACGAATGAGGGAGACGTTCCTGCAGATCGGGGCAGCAACTTTCCTCAGCTGGTCTCTGGGCTCCGGGAGCCAGAGAGCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399907.5
ENST00000399909.5
ENST00000399914.5
ENST00000472429.1
CDS GCA 90 bp TTCATAAATCTGGGTCCGAGGCGCCATGGCTTATGTCTATGGCACTaGAGGGAGCTGACGGTCAGCTGGGATGCCCGGTGCGAGGCAATG +
Preference number: 5 (lower is better)
Translates to: FINLGPRRHGLCLWH*RELTVSWDARCEAM
Trigger: CATTGCCTCGCACCGGGCATCCCAGCTGACCGTCAGCTCCCTGCAGTGCCATAGACATAAGCCATGGCGCCTCGGACCCAGATTTATGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327783.8
ENST00000389124.6
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS GCA 90 bp CTCCCGGAGCCCAGAGACCAGCTGAGGAAAGTTGCTGCCCCGATCTaGAGGAACGTCTCCCTCATTCGTCCTTTGGTCAGATGCAAAAGT +
Preference number: 5 (lower is better)
Translates to: LPEPRDQLRKVAAPI*RNVSLIRPLVRCKS
Trigger: ACTTTTGCATCTGACCAAAGGACGAATGAGGGAGACGTTCCTGCAGATCGGGGCAGCAACTTTCCTCAGCTGGTCTCTGGGCTCCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399907.5
ENST00000399909.5
ENST00000399914.5
ENST00000472429.1
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGAGAGATGCACCCAACTaGGGCCGGGTCCCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWRDAPN*GRVPAS
Trigger: TGAGGCGGGGACCCGGCCCAAGTTGGGTGCATCTCT...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTCCGATCCTGAGTACTaGCGGGGCGGTCTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWSDPEY*RGGLRE
Trigger: CTCCCTCAGACCGCCCCGCAAGTACTCAGGATCGGA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTTCCGATCCTGAGTACTaGCGGGGCGGTCTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTSDPEY*RGGLRE
Trigger: CTCCCTCAGACCGCCCCGCAAGTACTCAGGATCGGA...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGCACTGGCTTCTTTGTaGTCTTCCTCGGGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWALASL*SSSGQP
Trigger: TGGCTGCCCCGAGGAAGACAACAAAGAAGCCAGTGC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCCGTTCCACTCCCCTTaGTCATTCTGGGCCCCATAT +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWPFHSP*SFWAPY
Trigger: ATATGGGGCCCAGAATGACAAAGGGGAGTGGAACGG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTCCGTTCCACTCCCCTTaGTCATTCTGGGCCCCATAT +
Preference number: 5 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTPFHSP*SFWAPY
Trigger: ATATGGGGCCCAGAATGACAAAGGGGAGTGGAACGG...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp ATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACGCACTGGCTTCTTTGTaGTCTTCCTCGGGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: ISPTEMIQTLIGLSRHTDALASL*SSSGQP
Trigger: TGGCTGCCCCGAGGAAGACAACAAAGAAGCCAGTGC...GTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCCTACAGGCGTTTCCTaGGATCACGCCACAGTCTCT +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWPTGVS*DHATVS
Trigger: AGAGACTGTGGCGTGATCCAAGGAAACGCCTGTAGG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAAGAGATGCACCCAACTaGGGCCGGGTCCCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: PASTYSASIFPVYSFQCLRDAPN*GRVPAS
Trigger: TGAGGCGGGGACCCGGCCCAAGTTGGGTGCATCTCT...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATCCGATCCTGAGTACTaGCGGGGCGGTCTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: PASTYSASIFPVYSFQCLSDPEY*RGGLRE
Trigger: CTCCCTCAGACCGCCCCGCAAGTACTCAGGATCGGA...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGGCACTGGCTTCTTTGTaGTCTTCCTCGGGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMALASL*SSSGQP
Trigger: TGGCTGCCCCGAGGAAGACAACAAAGAAGCCAGTGC...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTCCCACCGGGCCTCTTaGATCAGGTTCATAAATCTG +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWSHRAS*IRFINL
Trigger: CAGATTTATGAACCTGATCAAAGAGGCCCGGTGGGA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTGCACTGGCTTCTTTGTaGTCTTCCTCGGGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSALASL*SSSGQP
Trigger: TGGCTGCCCCGAGGAAGACAACAAAGAAGCCAGTGC...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS CCA 90 bp AAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTaGATCACGCCACAGTCTCTTTTCTCTGAGTTCGTCTCTGATGAC +
Preference number: 5 (lower is better)
Translates to: KSVGNASFFFLQAFP*ITPQSLFSEFVSDD
Trigger: GTCATCAGAGACGAACTCAGAGAAAAGAGACTGTGGCGTGATCCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGGAACTTCGAGAGCATaGCAAATAGACTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWGTSRA*QIDCTA
Trigger: TGCTGTGCAGTCTATTTGCAATGCTCTCGAAGTTCC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTGGAACTTCGAGAGCATaGCAAATAGACTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTGTSRA*QIDCTA
Trigger: TGCTGTGCAGTCTATTTGCAATGCTCTCGAAGTTCC...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTCAGAGCCGCTTCAGTaGTCATCATGCCATCCAAAA +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWSEPLQ*SSCHPK
Trigger: TTTTGGATGGCATGATGACAACTGAAGCGGCTCTGA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTTCAGAGCCGCTTCAGTaGTCATCATGCCATCCAAAA +
Preference number: 5 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTSEPLQ*SSCHPK
Trigger: TTTTGGATGGCATGATGACAACTGAAGCGGCTCTGA...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGTCCCACCGGGCCTCTTaGATCAGGTTCATAAATCTG +
Preference number: 5 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTSHRAS*IRFINL
Trigger: CAGATTTATGAACCTGATCAAAGAGGCCCGGTGGGA...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCTGGACTTGTCTTTGTaGCTGTCCGTCATGTTAAGC +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWLDLSL*LSVMLS
Trigger: GCTTAACATGACGGACAGCAACAAAGACAAGTCCAG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTCTGGACTTGTCTTTGTaGCTGTCCGTCATGTTAAGC +
Preference number: 5 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTLDLSL*LSVMLS
Trigger: GCTTAACATGACGGACAGCAACAAAGACAAGTCCAG...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGGTGATATTGCTGGACTaGTCTTTGTTGCTGTCCGTC +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWVILLD*SLLLSV
Trigger: GACGGACAGCAACAAAGACAAGTCCAGCAATATCAC...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTTCTGGGCCCCATATTaGCCATCGGGAACTAGTTTA +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWFWAPY*PSGTSL
Trigger: TAAACTAGTTCCCGATGGCAAATATGGGGCCCAGAA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTTTCTGGGCCCCATATTaGCCATCGGGAACTAGTTTA +
Preference number: 5 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTFWAPY*PSGTSL
Trigger: TAAACTAGTTCCCGATGGCAAATATGGGGCCCAGAA...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCCGTTCCACTCCCCTTaGTCATTCTGGGCCCCATAT +
Preference number: 5 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSPFHSP*SFWAPY
Trigger: ATATGGGGCCCAGAATGACAAAGGGGAGTGGAACGG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTCCTTGAGTAAAGGCTaGGCATCTTTATTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWSLSKG*ASLFPE
Trigger: CTCTGGGAATAAAGATGCCAAGCCTTTACTCAAGGA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCCTTTCTTCATCTCCTaGAGTAAAGGCTTGGCATCT +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWPFFIS*SKGLAS
Trigger: AGATGCCAAGCCTTTACTCAAGGAGATGAAGAAAGG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTTGCTGGACTTGTCTTaGTTGCTGTCCGTCATGTTA +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWLLDLS*LLSVML
Trigger: TAACATGACGGACAGCAACAAAGACAAGTCCAGCAA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTTTGCTGGACTTGTCTTaGTTGCTGTCCGTCATGTTA +
Preference number: 5 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTLLDLS*LLSVML
Trigger: TAACATGACGGACAGCAACAAAGACAAGTCCAGCAA...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGTGATATTGCTGGACTaGTCTTTGTTGCTGTCCGTC +
Preference number: 5 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTVILLD*SLLLSV
Trigger: GACGGACAGCAACAAAGACAAGTCCAGCAATATCAC...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGGGAACTTCGAGAGCATaGCAAATAGACTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMGTSRA*QIDCTA
Trigger: TGCTGTGCAGTCTATTTGCAATGCTCTCGAAGTTCC...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGTCCTTGAGTAAAGGCTaGGCATCTTTATTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTSLSKG*ASLFPE
Trigger: CTCTGGGAATAAAGATGCCAAGCCTTTACTCAAGGA...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGCCTTTCTTCATCTCCTaGAGTAAAGGCTTGGCATCT +
Preference number: 5 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTPFFIS*SKGLAS
Trigger: AGATGCCAAGCCTTTACTCAAGGAGATGAAGAAAGG...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCAGAGCCGCTTCAGTaGTCATCATGCCATCCAAAA +
Preference number: 5 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMSEPLQ*SSCHPK
Trigger: TTTTGGATGGCATGATGACAACTGAAGCGGCTCTGA...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTTCCCACCGGGCCTCTTaGATCAGGTTCATAAATCTG +
Preference number: 5 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSSHRAS*IRFINL
Trigger: CAGATTTATGAACCTGATCAAAGAGGCCCGGTGGGA...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGATGTTAAGCCCACTGTaGGAATTCCAAATCCCAATC +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWMLSPL*EFQIPI
Trigger: GATTGGGATTTGGAATTCCAACAGTGGGCTTAACAT...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTATGTTAAGCCCACTGTaGGAATTCCAAATCCCAATC +
Preference number: 5 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTMLSPL*EFQIPI
Trigger: GATTGGGATTTGGAATTCCAACAGTGGGCTTAACAT...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTTCTGGGCCCCATATTaGCCATCGGGAACTAGTTTA +
Preference number: 5 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMFWAPY*PSGTSL
Trigger: TAAACTAGTTCCCGATGGCAAATATGGGGCCCAGAA...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCAGCTTCCCTTCTTCTaGGAGTTGAAGAATAGCAAT +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWQLPFF*ELKNSN
Trigger: ATTGCTATTCTTCAACTCCAAGAAGAAGGGAAGCTG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTCAGCTTCCCTTCTTCTaGGAGTTGAAGAATAGCAAT +
Preference number: 5 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTQLPFF*ELKNSN
Trigger: ATTGCTATTCTTCAACTCCAAGAAGAAGGGAAGCTG...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTCTTCCATGATAGCGTaGAAAGAGAGACACTTCTCT +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWSSMIA*KERHFS
Trigger: AGAGAAGTGTCTCTCTTTCAACGCTATCATGGAAGA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327783.8
ENST00000399914.5
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTCTTCCATGATAGCGTaGAAAGAGAGACACTGTTCA +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWSSMIA*KERHCS
Trigger: TGAACAGTGTCTCTCTTTCAACGCTATCATGGAAGA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389125.7
ENST00000399913.5
CDS-3UTR CAA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGGTTCCAGAAGTGGAGTaGGTTGGATGGGTTTGCTTA +
Preference number: 5 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMVPEVE*VGWVCL
Trigger: TAAGCAAACCCATCCAACCAACTCCACTTCTGGAAC...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCTGGTGACTGCAAACTaGAAAGCTAATTCTTCAACA +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWLVTAN*KANSST
Trigger: TGTTGAAGAATTAGCTTTCAAGTTTGCAGTCACCAG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTCTGGTGACTGCAAACTaGAAAGCTAATTCTTCAACA +
Preference number: 5 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTLVTAN*KANSST
Trigger: TGTTGAAGAATTAGCTTTCAAGTTTGCAGTCACCAG...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCCTTGAGTAAAGGCTaGGCATCTTTATTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMSLSKG*ASLFPE
Trigger: CTCTGGGAATAAAGATGCCAAGCCTTTACTCAAGGA...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCTGGACTTGTCTTTGTaGCTGTCCGTCATGTTAAGC +
Preference number: 5 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSLDLSL*LSVMLS
Trigger: GCTTAACATGACGGACAGCAACAAAGACAAGTCCAG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTGTGATATTGCTGGACTaGTCTTTGTTGCTGTCCGTC +
Preference number: 5 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSVILLD*SLLLSV
Trigger: GACGGACAGCAACAAAGACAAGTCCAGCAATATCAC...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGACAATGAGTGTTCTGTaGGCCAATGAATCAGTGATA +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWTMSVL*ANESVI
Trigger: TATCACTGATTCATTGGCCAACAGAACACTCATTGT...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTACAATGAGTGTTCTGTaGGCCAATGAATCAGTGATA +
Preference number: 5 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTTMSVL*ANESVI
Trigger: TATCACTGATTCATTGGCCAACAGAACACTCATTGT...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGGTTGGTTGGATGGGTTaGCTTACATTGCAGTCCATA +
Preference number: 5 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMVGWMG*LTLQSI
Trigger: TATGGACTGCAATGTAAGCAAACCCATCCAACCAAC...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGGAACTTCGAGAGCATaGCAAATAGACTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: PASTYSASIFPVYSFQCLGTSRA*QIDCTA
Trigger: TGCTGTGCAGTCTATTTGCAATGCTCTCGAAGTTCC...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCCTTTCTTCATCTCCTaGAGTAAAGGCTTGGCATCT +
Preference number: 5 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSPFFIS*SKGLAS
Trigger: AGATGCCAAGCCTTTACTCAAGGAGATGAAGAAAGG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATCAGAGCCGCTTCAGTaGTCATCATGCCATCCAAAA +
Preference number: 5 (lower is better)
Translates to: PASTYSASIFPVYSFQCLSEPLQ*SSCHPK
Trigger: TTTTGGATGGCATGATGACAACTGAAGCGGCTCTGA...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGTCCTTCCTCAAGCCATaGGTTTTATTAAAGGTGATA +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWSFLKP*VLLKVI
Trigger: TATCACCTTTAATAAAACCAATGGCTTGAGGAAGGA...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGATGTTAAGCCCACTGTaGGAATTCCAAATCCCAATC +
Preference number: 5 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMMLSPL*EFQIPI
Trigger: GATTGGGATTTGGAATTCCAACAGTGGGCTTAACAT...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTACTGGACTTGTCTTTGTaGCTGTCCGTCATGTTAAGC +
Preference number: 5 (lower is better)
Translates to: PASTYSASIFPVYSFQCLLDLSL*LSVMLS
Trigger: GCTTAACATGACGGACAGCAACAAAGACAAGTCCAG...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTTTGCTGGACTTGTCTTaGTTGCTGTCCGTCATGTTA +
Preference number: 5 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSLLDLS*LLSVML
Trigger: TAACATGACGGACAGCAACAAAGACAAGTCCAGCAA...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGAATGAATCAGTGATATaGCTGGACTTGTCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWNESVI*LDLSLL
Trigger: CAACAAAGACAAGTCCAGCAATATCACTGATTCATT...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp CTCCAAAAATCTGTAGGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTGGCCCTTCTTCTTGGAGTaGAAGAATAGCAATAGTAAT +
Preference number: 5 (lower is better)
Translates to: LQKSVGNASFFFLQAFPWPFFLE*KNSNSN
Trigger: ATTACTATTGCTATTCTTCAACTCCAAGAAGAAGGG...CCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCCTACAGATTTTTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS-3UTR CAA 90 bp TCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACACTCCCTTCTTCTTGGAGTaGAAGAATAGCAATAGTAAT +
Preference number: 5 (lower is better)
Translates to: SPTEMIQTLIGLSRHTDTPFFLE*KNSNSN
Trigger: ATTACTATTGCTATTCTTCAACTCCAAGAAGAAGGG...AGTGTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGCAGCTTCCCTTCTTCTaGGAGTTGAAGAATAGCAAT +
Preference number: 5 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMQLPFF*ELKNSN
Trigger: ATTGCTATTCTTCAACTCCAAGAAGAAGGGAAGCTG...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCAGAAGTGGAGTTGGTaGGATGGGTTTGCTTACATT +
Preference number: 5 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSQKWSW*DGFAYI
Trigger: AATGTAAGCAAACCCATCCAACCAACTCCACTTCTG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGTTCCAGAAGTGGAGTaGGTTGGATGGGTTTGCTTA +
Preference number: 5 (lower is better)
Translates to: PASTYSASIFPVYSFQCLVPEVE*VGWVCL
Trigger: TAAGCAAACCCATCCAACCAACTCCACTTCTGGAAC...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATCCTTGAGTAAAGGCTaGGCATCTTTATTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: PASTYSASIFPVYSFQCLSLSKG*ASLFPE
Trigger: CTCTGGGAATAAAGATGCCAAGCCTTTACTCAAGGA...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTACCTTTCTTCATCTCCTaGAGTAAAGGCTTGGCATCT +
Preference number: 5 (lower is better)
Translates to: PASTYSASIFPVYSFQCLPFFIS*SKGLAS
Trigger: AGATGCCAAGCCTTTACTCAAGGAGATGAAGAAAGG...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp GTCATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGTCCTTCCTCAAGCCATaGGTTTTATTAAAGGTGATA +
Preference number: 5 (lower is better)
Translates to: VISPTEMIQTLIGLSRHTSFLKP*VLLKVI
Trigger: TATCACCTTTAATAAAACCAATGGCTTGAGGAAGGA...CGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATTGCTGGACTTGTCTTaGTTGCTGTCCGTCATGTTA +
Preference number: 5 (lower is better)
Translates to: PASTYSASIFPVYSFQCLLLDLS*LLSVML
Trigger: TAACATGACGGACAGCAACAAAGACAAGTCCAGCAA...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp ATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACAATGAATCAGTGATATaGCTGGACTTGTCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: ISPTEMIQTLIGLSRHTDNESVI*LDLSLL
Trigger: CAACAAAGACAAGTCCAGCAATATCACTGATTCATT...GTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGACAATGAGTGTTCTGTaGGCCAATGAATCAGTGATA +
Preference number: 5 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMTMSVL*ANESVI
Trigger: TATCACTGATTCATTGGCCAACAGAACACTCATTGT...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTCAGCTTCCCTTCTTCTaGGAGTTGAAGAATAGCAAT +
Preference number: 5 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSQLPFF*ELKNSN
Trigger: ATTGCTATTCTTCAACTCCAAGAAGAAGGGAAGCTG...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp ATTTCCCCCACTGAGATGATCCAAACATTGATAGGATTATCAAGGCATACGGACGAGATGATCCAAACATaGATAGGATTATCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: ISPTEMIQTLIGLSRHTDEMIQT*IGLSRH
Trigger: ATGCCTTGATAATCCTATCAATGTTTGGATCATCTC...GTCCGTATGCCTTGATAATCCTATCAATGTTTGGATCATCTCAGTGGGGGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389124.6
CDS-3UTR CAA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAGTTGGTTGGATGGGTTaGCTTACATTGCAGTCCATA +
Preference number: 5 (lower is better)
Translates to: PASTYSASIFPVYSFQCLVGWMG*LTLQSI
Trigger: TATGGACTGCAATGTAAGCAAACCCATCCAACCAAC...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTACAGAAGTGGAGTTGGTaGGATGGGTTTGCTTACATT +
Preference number: 5 (lower is better)
Translates to: PASTYSASIFPVYSFQCLQKWSW*DGFAYI
Trigger: AATGTAAGCAAACCCATCCAACCAACTCCACTTCTG...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGAATGAATCAGTGATATaGCTGGACTTGTCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMNESVI*LDLSLL
Trigger: CAACAAAGACAAGTCCAGCAATATCACTGATTCATT...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp TGCCCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGCCCTTCTTCTTGGAGTaGAAGAATAGCAATAGTAAT +
Preference number: 5 (lower is better)
Translates to: CPCFNIQCKYLSSVFISMPFFLE*KNSNSN
Trigger: ATTACTATTGCTATTCTTCAACTCCAAGAAGAAGGG...CATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTTCCTTCCTCAAGCCATaGGTTTTATTAAAGGTGATA +
Preference number: 5 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSSFLKP*VLLKVI
Trigger: TATCACCTTTAATAAAACCAATGGCTTGAGGAAGGA...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAATGAATCAGTGATATaGCTGGACTTGTCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSNESVI*LDLSLL
Trigger: CAACAAAGACAAGTCCAGCAATATCACTGATTCATT...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTAACAATGAGTGTTCTGTaGGCCAATGAATCAGTGATA +
Preference number: 5 (lower is better)
Translates to: PASTYSASIFPVYSFQCLTMSVL*ANESVI
Trigger: TATCACTGATTCATTGGCCAACAGAACACTCATTGT...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATGGGTTTGCTTACATaGCAGTCCATAAAAGAAACA +
Preference number: 5 (lower is better)
Translates to: PCFNIQCKYLSSVFISMSMGLLT*QSIKET
Trigger: TGTTTCTTTTATGGACTGCAATGTAAGCAAACCCAT...AGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS-3UTR CAA 90 bp CCTGCTTCAACATACAGTGCAAGTATCTTTCCAGTGTATTCATTTCAATGTCTATCCTTCCTCAAGCCATaGGTTTTATTAAAGGTGATA +
Preference number: 5 (lower is better)
Translates to: PASTYSASIFPVYSFQCLSFLKP*VLLKVI
Trigger: TATCACCTTTAATAAAACCAATGGCTTGAGGAAGGA...TAGACATTGAAATGAATACACTGGAAAGATACTTGCACTGTATGTTGAAGCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399907.5
ENST00000399909.5
CDS GCA 72 bp CAACTTGGGCCGGGTCCCCGCCTCATCCTCTCTGGATaGTCCGGTTCCAAGCACGCTGCGCGCTCCCCACGG +
Preference number: 6 (lower is better)
Translates to: QLGPGPRLILSG*SGSKHAARSPR
Trigger: CCGTGGGGAGCGCGCAGCGTGCTTGGAACCGGAGCATCCAGAGAGGATGAGGCGGGGACCCGGCCCAAGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS CCA 72 bp CAGCCGCTGCCGGACGCCCGAGAGATGCACCCAACTTaGGCCGGGTCCCCGCCTCATCCTCTCTGGATGCTC +
Preference number: 6 (lower is better)
Translates to: QPLPDAREMHPT*AGSPPHPLWML
Trigger: GAGCATCCAGAGAGGATGAGGCGGGGACCCGGCCCAAGTTGGGTGCATCTCTCGGGCGTCCGGCAGCGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS CCA 72 bp CACCCAACTTGGGCCGGGTCCCCGCCTCATCCTCTCTaGATGCTCCGGTTCCAAGCACGCTGCGCGCTCCCC +
Preference number: 6 (lower is better)
Translates to: HPTWAGSPPHPL*MLRFQARCALP
Trigger: GGGGAGCGCGCAGCGTGCTTGGAACCGGAGCATCCAGAGAGGATGAGGCGGGGACCCGGCCCAAGTTGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS GCA 72 bp ATGCCGAGATACAGCCGCTGCCGGACGCCCGAGAGATaGACCCAACTTGGGCCGGGTCCCCGCCTCATCCTC +
Preference number: 6 (lower is better)
Translates to: MPRYSRCRTPER*TQLGPGPRLIL
Trigger: GAGGATGAGGCGGGGACCCGGCCCAAGTTGGGTGCATCTCTCGGGCGTCCGGCAGCGGCTGTATCTCGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS GCA 72 bp CCTCATCCTCTCTGGATGCTCCGGTTCCAAGCACGCTaGGCGCTCCCCACGGAGCGAGCTCGAGGGAACCCG +
Preference number: 6 (lower is better)
Translates to: PHPLWMLRFQAR*ALPTERARGNP
Trigger: CGGGTTCCCTCGAGCTCGCTCCGTGGGGAGCGCGCAGCGTGCTTGGAACCGGAGCATCCAGAGAGGATGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS CAA 72 bp ACAGCCGCTGCCGGACGCCCGAGAGATGCACCCAACTaGGGCCGGGTCCCCGCCTCATCCTCTCTGGATGCT +
Preference number: 6 (lower is better)
Translates to: TAAAGRPRDAPN*GRVPASSSLDA
Trigger: AGCATCCAGAGAGGATGAGGCGGGGACCCGGCCCAAGTTGGGTGCATCTCTCGGGCGTCCGGCAGCGGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS CAA 90 bp TGCCGAGATACAGCCGCTGCCGGACGCCCGAGAGATGCACCCAACTaGGGCCGGGTCCCCGCCTCATCCTCTCTGGATGCTCCGGTTCCA +
Preference number: 6 (lower is better)
Translates to: CRDTAAAGRPRDAPN*GRVPASSSLDAPVP
Trigger: TGGAACCGGAGCATCCAGAGAGGATGAGGCGGGGACCCGGCCCAAGTTGGGTGCATCTCTCGGGCGTCCGGCAGCGGCTGTATCTCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS GCA 72 bp CTGGGTCCGAGGCGCCATGGCTTATGTCTATGGCACTaGAGGGAGCTGACGGTCAGCTGGGATGCCCGGTGC +
Preference number: 6 (lower is better)
Translates to: LGPRRHGLCLWH*RELTVSWDARC
Trigger: GCACCGGGCATCCCAGCTGACCGTCAGCTCCCTGCAGTGCCATAGACATAAGCCATGGCGCCTCGGACCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327783.8
ENST00000389124.6
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS CCA 72 bp AGCAGAGGAAATAGAGGAGTGCCCAGCTGGTGTCCCTaGTCCAGAGCCCGGGCTGGGCGAGGAGTGTGCCGT +
Preference number: 6 (lower is better)
Translates to: SRGNRGVPSWCP*SRARAGRGVCR
Trigger: ACGGCACACTCCTCGCCCAGCCCGGGCTCTGGACCAGGGACACCAGCTGGGCACTCCTCTATTTCCTCTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327783.8
ENST00000389124.6
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS TCA 72 bp TCAGCGCTCTCTGGCTCCCGGAGCCCAGAGACCAGCTaGGGAAAGTTGCTGCCCCGATCTGCAGGAACGTCT +
Preference number: 6 (lower is better)
Translates to: SALSGSRSPETS*GKLLPRSAGTS
Trigger: AGACGTTCCTGCAGATCGGGGCAGCAACTTTCCTCAGCTGGTCTCTGGGCTCCGGGAGCCAGAGAGCGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399907.5
ENST00000399909.5
ENST00000399914.5
ENST00000472429.1
CDS GCA 72 bp GCTCCCGGAGCCCAGAGACCAGCTGAGGAAAGTTGCTaGCCCGATCTGCAGGAACGTCTCCCTCATTCGTCC +
Preference number: 6 (lower is better)
Translates to: APGAQRPAEESC*PDLQERLPHSS
Trigger: GGACGAATGAGGGAGACGTTCCTGCAGATCGGGGCAGCAACTTTCCTCAGCTGGTCTCTGGGCTCCGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399907.5
ENST00000399909.5
ENST00000399914.5
ENST00000472429.1
CDS GCA 72 bp CTGGCTCCCGGAGCCCAGAGACCAGCTGAGGAAAGTTaGTGCCCCGATCTGCAGGAACGTCTCCCTCATTCG +
Preference number: 6 (lower is better)
Translates to: LAPGAQRPAEES*CPDLQERLPHS
Trigger: CGAATGAGGGAGACGTTCCTGCAGATCGGGGCAGCAACTTTCCTCAGCTGGTCTCTGGGCTCCGGGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399907.5
ENST00000399909.5
ENST00000399914.5
ENST00000472429.1
CDS GCA 72 bp GGTCTGAGGGAGGATATAGCAGAGGAAATAGAGGAGTaGCCAGCTGGTGTCCCTGGTCCAGAGCCCGGGCTG +
Preference number: 6 (lower is better)
Translates to: GLREDIAEEIEE*PAGVPGPEPGL
Trigger: CAGCCCGGGCTCTGGACCAGGGACACCAGCTGGGCACTCCTCTATTTCCTCTGCTATATCCTCCCTCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327783.8
ENST00000389124.6
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS GCA 72 bp CCCAGAGACCAGCTGAGGAAAGTTGCTGCCCCGATCTaGAGGAACGTCTCCCTCATTCGTCCTTTGGTCAGA +
Preference number: 6 (lower is better)
Translates to: PRDQLRKVAAPI*RNVSLIRPLVR
Trigger: TCTGACCAAAGGACGAATGAGGGAGACGTTCCTGCAGATCGGGGCAGCAACTTTCCTCAGCTGGTCTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399907.5
ENST00000399909.5
ENST00000399914.5
ENST00000472429.1
CDS GCA 72 bp TGCAGGAACGTCTCCCTCATTCGTCCTTTGGTCAGATaGAAAAGTCGGGGGATAGGCACAGACAGAGGAGGG +
Preference number: 6 (lower is better)
Translates to: CRNVSLIRPLVR*KSRGIGTDRGG
Trigger: CCCTCCTCTGTCTGTGCCTATCCCCCGACTTTTGCATCTGACCAAAGGACGAATGAGGGAGACGTTCCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399907.5
ENST00000399909.5
ENST00000399914.5
ENST00000472429.1
CDS GCA 72 bp TTTCTCCCGCACGTAGGTGATGGTAAGAGGAGCCACTaGCAGGTCAGCCCTGTGATCTATGAGTTCTTTAAC +
Preference number: 6 (lower is better)
Translates to: FLPHVGDGKRSH*QVSPVIYEFFN
Trigger: GTTAAAGAACTCATAGATCACAGGGCTGACCTGGCAGTGGCTCCTCTTACCATCACCTACGTGCGGGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327783.8
ENST00000389124.6
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
CDS CAA 72 bp TTCCACTGTTTCAAAAATCCCTCCGATCCTGAGTACTaGCGGGGCGGTCTGAGGGAGGATATAGCAGAGGAA +
Preference number: 6 (lower is better)
Translates to: FHCFKNPSDPEY*RGGLREDIAEE
Trigger: TTCCTCTGCTATATCCTCCCTCAGACCGCCCCGCAAGTACTCAGGATCGGAGGGATTTTTGAAACAGTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000327783.8
ENST00000389124.6
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS CCA 72 bp GGGAATGCATCCTTTTTCTTCCTACAGGCGTTTCCTTaGATCACGCCACAGTCTCTTTTCTCTGAGTTCGTC +
Preference number: 6 (lower is better)
Translates to: GNASFFFLQAFP*ITPQSLFSEFV
Trigger: GACGAACTCAGAGAAAAGAGACTGTGGCGTGATCCAAGGAAACGCCTGTAGGAAGAAAAAGGATGCATTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389125.7
ENST00000399913.5
ENST00000399914.5
CDS CAA 72 bp TCTATGAGTTCTTTAACCATCCCGTTCCACTCCCCTTaGTCATTCTGGGCCCCATATTTGCCATCGGGAACT +
Preference number: 6 (lower is better)
Translates to: SMSSLTIPFHSP*SFWAPYLPSGT
Trigger: AGTTCCCGATGGCAAATATGGGGCCCAGAATGACAAAGGGGAGTGGAACGGGATGGTTAAAGAACTCATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327783.8
ENST00000389124.6
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
CDS GCA 72 bp ATAGAGGACCAGATCCAGGATCGCCCTGCTGATAGCTaGATAATCTGGGTAAAGGTTGATGTAAAACAAATC +
Preference number: 6 (lower is better)
Translates to: IEDQIQDRPADS*IIWVKVDVKQI
Trigger: GATTTGTTTTACATCAACCTTTACCCAGATTATGCAGCTATCAGCAGGGCGATCCTGGATCTGGTCCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327783.8
ENST00000389124.6
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS CAA 90 bp AGTGTTCTGTTGGCCAATGAATCAGTGATATTGCTGGACTTGTCTTaGTTGCTGTCCGTCATGTTAAGCCCACTGTTGGAATTCCAAATC +
Preference number: 6 (lower is better)
Translates to: SVLLANESVILLDLS*LLSVMLSPLLEFQI
Trigger: GATTTGGAATTCCAACAGTGGGCTTAACATGACGGACAGCAACAAAGACAAGTCCAGCAATATCACTGATTCATTGGCCAACAGAACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327783.8
ENST00000389124.6
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
CDS CAA 90 bp ACAATGAGTGTTCTGTTGGCCAATGAATCAGTGATATTGCTGGACTaGTCTTTGTTGCTGTCCGTCATGTTAAGCCCACTGTTGGAATTC +
Preference number: 6 (lower is better)
Translates to: TMSVLLANESVILLD*SLLLSVMLSPLLEF
Trigger: GAATTCCAACAGTGGGCTTAACATGACGGACAGCAACAAAGACAAGTCCAGCAATATCACTGATTCATTGGCCAACAGAACACTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327783.8
ENST00000389124.6
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
CDS CAA 72 bp TTGTCTTTGTTGCTGTCCGTCATGTTAAGCCCACTGTaGGAATTCCAAATCCCAATCTTTTCAGTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: LSLLLSVMLSPL*EFQIPIFSVPS
Trigger: GGAAGGAACTGAAAAGATTGGGATTTGGAATTCCAACAGTGGGCTTAACATGACGGACAGCAACAAAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389125.7
ENST00000399909.5
ENST00000399914.5
CDS CAA 72 bp TTGTCTTTGTTGCTGTCCGTCATGTTAAGCCCACTGTaGGAATTCCAAATCCCAATCTTCTTCCACACTTTA +
Preference number: 6 (lower is better)
Translates to: LSLLLSVMLSPL*EFQIPIFFHTL
Trigger: TAAAGTGTGGAAGAAGATTGGGATTTGGAATTCCAACAGTGGGCTTAACATGACGGACAGCAACAAAGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327783.8
ENST00000389124.6
ENST00000399907.5
ENST00000399913.5
CDS CAA 90 bp TTAGGCATCAGGGTTCGGTTTCTGTTAATGCTGGTGACTGCAAACTaGAAAGCTAATTCTTCAACATTAACAGGCTCATTTTCCACTGTT +
Preference number: 6 (lower is better)
Translates to: LGIRVRFLLMLVTAN*KANSSTLTGSFSTV
Trigger: AACAGTGGAAAATGAGCCTGTTAATGTTGAAGAATTAGCTTTCAAGTTTGCAGTCACCAGCATTAACAGAAACCGAACCCTGATGCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327783.8
ENST00000389124.6
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1
CDS CAA 72 bp AGGGTTCGGTTTCTGTTAATGCTGGTGACTGCAAACTaGAAAGCTAATTCTTCAACATTAACAGGCTCATTT +
Preference number: 6 (lower is better)
Translates to: RVRFLLMLVTAN*KANSSTLTGSF
Trigger: AAATGAGCCTGTTAATGTTGAAGAATTAGCTTTCAAGTTTGCAGTCACCAGCATTAACAGAAACCGAACCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327783.8
ENST00000389124.6
ENST00000389125.7
ENST00000399907.5
ENST00000399909.5
ENST00000399913.5
ENST00000399914.5
ENST00000472429.1