RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRID2IP (Homo sapiens)

Ensembl gene IDs: ENSG00000215045

Ensembl transcript IDs: ENST00000435185.5, ENST00000452113.5, ENST00000457091.2

Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTaGCCTCTCGGCCTCCATCTCCCTGCTCAGGCCGCAGAGGACGCG +
Preference number: 1 (lower is better)
Translates to: QSPGHSGPGPRQCLG*PLGLHLPAQAAEDA
Trigger: CGCGTCCTCTGCGGCCTGAGCAGGGAGATGGAGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
3UTR-3UTR GCA 90 bp GCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCGGCCTCCATCTCCCTaGTCAGGCCGCAGAGGACGC +
Preference number: 2 (lower is better)
Translates to: AQEADRARSSMCRHTQHLRPPSP*SGRRGR
Trigger: GCGTCCTCTGCGGCCTGAGCAGGGAGATGGAGGCCG...CAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
3UTR-3UTR GCA 90 bp GCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCGGCAGTGTCTGGGCTaGCCTCTCGGCCTCCATCTC +
Preference number: 2 (lower is better)
Translates to: AQEADRARSSMCRHTQHLRQCLG*PLGLHL
Trigger: GAGATGGAGGCCGAGAGGGCAGCCCAGACACTGCCG...CAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
3UTR-3UTR GCA 90 bp GAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCGGCACACTCAGCACCTaGTCCTACAGCATCTGGCTC +
Preference number: 2 (lower is better)
Translates to: ERSGKWAQEADRARSSMCGTLST*SYSIWL
Trigger: GAGCCAGATGCTGTAGGAGCAGGTGCTGAGTGTGCC...GCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
3UTR GCA 72 bp GGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTaGCCTCTCGGCCTCCATCTCCCTGCTCAGGCCGCA +
Preference number: 3 (lower is better)
Translates to: GHSGPGPRQCLG*PLGLHLPAQAA
Trigger: TGCGGCCTGAGCAGGGAGATGGAGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
3UTR CCA 72 bp GAGAGGCTGGCGGTGTGCTCAGAGCCCGGGGCACAGTaGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: ERLAVCSEPGAQ*PRTSAVSGLPS
Trigger: AGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGAGCACACCGCCAGCCTCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp CCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTGGCTTGGCCAGCGCCTaGGCAGGGCCCCGGGAACCA +
Preference number: 4 (lower is better)
Translates to: PGAQWPRTSAVSGLPSRPGLASA*AGPREP
Trigger: TGGTTCCCGGGGCCCTGCTCAGGCGCTGGCCAAGCC...AGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp CCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTCCCACTGCAGGGAGGTaGGCGCCGACGACGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PGAQWPRTSAVSGLPSRPPTAGR*APTTGW
Trigger: CCAACCCGTCGTCGGCGCTCACCTCCCTGCAGTGGG...AGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGTCTCACTGCGCCGGTaGCCCAGGCCCCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: QSPGHSGPGPRQCLGCPLVSLRR*PRPRDS
Trigger: GCTGTCCCGGGGCCTGGGCCACCGGCGCAGTGAGAC...GAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp TCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCCAGCAAGGAGGCCCTaGGCGGGGGCGGCTCATCGG +
Preference number: 4 (lower is better)
Translates to: SEPGAQWPRTSAVSGLPSPARRP*AGAAHR
Trigger: CCGATGAGCCGCCCCCGCGCAGGGCCTCCTTGCTGG...AGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp CCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTCCTGGGACCGGAGGCTaGGGCGGCACATGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PGAQWPRTSAVSGLPSRPPGTGG*GGTWRK
Trigger: CTTCCTCCATGTGCCGCCGCAGCCTCCGGTCCCAGG...AGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp CTCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCCATGGCCTCGCGCTaGAGCCCGTCGAGCGCCCGA +
Preference number: 4 (lower is better)
Translates to: LRARGTVAPDLGSVWAALSMASR*SPSSAR
Trigger: TCGGGCGCTCGACGGGCTGCAGCGCGAGGCCATGGA...GAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTTGCCCAGCTCCTCCATaGCCTCGCGCTGCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: PGAQWPRTSAVSGLPSRPCPAPP*PRAAAR
Trigger: ACGGGCTGCAGCGCGAGGCCATGGAGGAGCTGGGCA...AGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp CAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCTCGCTCGCTGGGCCATaGGACGCCGGACAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QSPGHSGPGPRQCLGCPLSLAGP*DAGQGP
Trigger: AGGACCCTGTCCGGCGTCTCATGGCCCAGCGAGCGA...GAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp AGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGGTGGGACTCAGAGCTaGTGGGGGAGGCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: RARGTVAPDLGSVWAALSGGTQS*WGRPDP
Trigger: GGGGTCTGGCCTCCCCCAGCAGCTCTGAGTCCCACC...CGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTCCTCCACCACCAGCGTaGGCATGGCACCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: PGAQWPRTSAVSGLPSRPPPPPA*AWHHCP
Trigger: AGGGCAGTGGTGCCATGCCCACGCTGGTGGTGGAGG...AGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp TCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTGGCTGCGGCGGCACATaGAGGAAGCCCGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SEPGAQWPRTSAVSGLPSGCGGT*RKPAGS
Trigger: GCTCCCTGCGGGCTTCCTCCATGTGCCGCCGCAGCC...AGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp CTCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCATCTCCGCCACCCACTaGAGGGAGGTGAGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: LRARGTVAPDLGSVWAALISATH*REVSAD
Trigger: GTCGGCGCTCACCTCCCTGCAGTGGGTGGCGGAGAT...GAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp AGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGCGGCAGTGTCTGGGCTaGCCTCTCGGCCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: RARGTVAPDLGSVWAALSRQCLG*PLGLHL
Trigger: GAGATGGAGGCCGAGAGGGCAGCCCAGACACTGCCG...CGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp TGCTCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTTGCCCAGGAGGCCCTaGGACACCACCTCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: CSEPGAQWPRTSAVSGLPLPRRP*DTTSSK
Trigger: CTTCGACGAGGTGGTGTCTCAGGGCCTCCTGGGCAA...GGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp CTCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCAATCATCCACGATGGTaGCCCGGGGGCCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LRARGTVAPDLGSVWAALNHPRW*PGGPAA
Trigger: AGCAGCTGGGCCCCCGGGTCACCATCGTGGATGATT...GAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTGGCAGCATTGTCAGCTaGGCTCCCAGGCAGGACAGA +
Preference number: 4 (lower is better)
Translates to: PGAQWPRTSAVSGLPSRPGSIVS*APRQDR
Trigger: TCTGTCCTGCCTGGGAGCCCAGCTGACAATGCTGCC...AGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp TGCTCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCATCTGCAGGACGAACTaGTCCGGCTCGCTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: CSEPGAQWPRTSAVSGLPICRTN*SGSLRR
Trigger: CCGCCTCAGCGAGCCGGACCAGTTCGTCCTGCAGAT...GGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTCCATCTCCCAGGGTGGCCTGGAAGTaGAGGCTGCGCAGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: QWPRTSAVSGLPSRPPSPRVAWK*RLRRRV
Trigger: GACACGCCTGCGCAGCCTCCACTTCCAGGCCACCCT...GGGAGATGGAGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTTCTTCTCCTGGAGGGTaGCCTGGAAGTGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PGAQWPRTSAVSGLPSRPSSPGG*PGSGGC
Trigger: GCAGCCTCCACTTCCAGGCCACCCTCCAGGAGAAGA...AGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTCCATCTCCCGAGCGCCCGAAGTGCTaGCTGGGCCGTCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: QWPRTSAVSGLPSRPPSPERPKC*LGRLQE
Trigger: TTCCTGGAGACGGCCCAGCCAGCACTTCGGGCGCTC...GGGAGATGGAGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp CAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTCCATCTCCCCCCACCGCAAGCGCTTaGCGCTCATGTGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: QWPRTSAVSGLPSRPPSPPTASA*RSCGWS
Trigger: AGACCAGCCACATGAGCGTCAAGCGCTTGCGGTGGG...GGGAGATGGAGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp CAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCTGGGCATGGCACCACTaGCCTGCAGCATGGACACCA +
Preference number: 4 (lower is better)
Translates to: QSPGHSGPGPRQCLGCPLWAWHH*PAAWTP
Trigger: TGGTGTCCATGCTGCAGGGCAGTGGTGCCATGCCCA...GAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp CCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTTGCAGTCGCTGGCGCTaGTCCGCTCATTGGTTACGA +
Preference number: 4 (lower is better)
Translates to: PGAQWPRTSAVSGLPSRPCSRWR*SAHWLR
Trigger: TCGTAACCAATGAGCGGAGCAGCGCCAGCGACTGCA...AGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp CCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTGGCACACTCAGCACCTaGTCCTACAGCATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PGAQWPRTSAVSGLPSRPGTLST*SYSIWL
Trigger: GAGCCAGATGCTGTAGGAGCAGGTGCTGAGTGTGCC...AGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp AGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGAGCTCCAGGGAGGCCTaGCGCAAGCATTCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RARGTVAPDLGSVWAALSSSREA*RKHSRL
Trigger: CAGCCTTGAATGCTTGCGCCAGGCCTCCCTGGAGCT...CGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCCTGGTCAGGGCCCGTTaGTTCACTTTGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QSPGHSGPGPRQCLGCPLLVRAR*FTLAAR
Trigger: CCTGGCTGCCAAAGTGAACCAACGGGCCCTGACCAG...GAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp AGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGCCAGGCAGCTCATGGTaGCCTCTTTCGGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: RARGTVAPDLGSVWAALSPGSSW*PLSVVV
Trigger: GACCACCACCGAAAGAGGCCACCATGAGCTGCCTGG...CGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp AGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGTCCGGTCACCTGACTTaGGGGCAGCATTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RARGTVAPDLGSVWAALSSGHLT*GQHCQL
Trigger: CAGCTGACAATGCTGCCCTCAAGTCAGGTGACCGGA...CGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp CCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTTCAGCAGCTGGTAGATaGACTGCCACAGGACCTGCT +
Preference number: 4 (lower is better)
Translates to: PGAQWPRTSAVSGLPSRPSAAGR*TATGPA
Trigger: AGCAGGTCCTGTGGCAGTTCATCTACCAGCTGCTGA...AGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp CCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTTGGGCTGTCCATCGTTaGGATAGTTGCCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: PGAQWPRTSAVSGLPSRPWAVHR*DSCPWP
Trigger: TGGCCATGGGCAACTATCTCAACGATGGACAGCCCA...AGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp AGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGTCGAAGCGCGCCCGGTaGTTCTTGGGGATGAAGATC +
Preference number: 4 (lower is better)
Translates to: RARGTVAPDLGSVWAALSSKRAR*FLGMKI
Trigger: GATCTTCATCCCCAAGAAGCACCGGGCGCGCTTCGA...CGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp CCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTCCTGGAAGTGGAGGCTaGGCAGGCGTGTCTTGTATT +
Preference number: 4 (lower is better)
Translates to: PGAQWPRTSAVSGLPSRPPGSGG*AGVSCI
Trigger: AATACAAGACACGCCTGCGCAGCCTCCACTTCCAGG...AGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp GCCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCCGGCCTCCATCTCCCTaGTCAGGCCGCAGAGGACGC +
Preference number: 4 (lower is better)
Translates to: AWERSGKWAQEADRARSSRPPSP*SGRRGR
Trigger: GCGTCCTCTGCGGCCTGAGCAGGGAGATGGAGGCCG...GGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCCGCTGCTCCGCTCATTaGTTACGAAGCTGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: QSPGHSGPGPRQCLGCPLRCSAH*LRSCPG
Trigger: ACCAGGGCAGCTTCGTAACCAATGAGCGGAGCAGCG...GAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTCCATCTCCCCTGGGCTTAGCGTCATaGAAAGGCAGGGGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: QWPRTSAVSGLPSRPPSPLGLAS*KGRGGG
Trigger: ACCGCCACCCCTGCCTTTCCATGACGCTAAGCCCAG...GGGAGATGGAGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCTCCTCTGTCTTCTCCTaGAGGGTGGCCTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: QSPGHSGPGPRQCLGCPLSSVFS*RVAWKW
Trigger: CCACTTCCAGGCCACCCTCCAGGAGAAGACAGAGGA...GAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTGCTGGCTCAGCGATTTaGCAAGGATGTGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PGAQWPRTSAVSGLPSRPAGSAI*QGCAGR
Trigger: CCTTCCTGCACATCCTTGCCAAATCGCTGAGCCAGC...AGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp TCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTAGTAGGTGCTCCAGCTaGTGGCTGAAGGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SEPGAQWPRTSAVSGLPSSRCSS*WLKVLP
Trigger: AGGGAGGACCTTCAGCCAGCAGCTGGAGCACCTACT...AGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp TGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACGGACGTGCCGTCGCCTaGCTGGCGCTCGCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: WAQEADRARSSMCRHTQHGRAVA*LALAWD
Trigger: ATCCCAGGCGAGCGCCAGGCAGGCGACGGCACGTCC...GTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp GGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCGGCGCCGGGGCTCCATaGTCATCAGCACCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: GPKKPTEHGPPCAGTLSTGAGAP*SSAPGA
Trigger: TGCGCCAGGTGCTGATGAGCATGGAGCCCCGGCGCC...GGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTCCATCTCCCGGAGTCACTGGCAAATaGGACGAGCCCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: QWPRTSAVSGLPSRPPSPGVTGK*DEPFLH
Trigger: GTGGAGGAAGGGCTCGTCCCATTTGCCAGTGACTCC...GGGAGATGGAGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCAGTGCCGTCGCCTGCCTaGCGCTCGCCTGGGATCAGG +
Preference number: 4 (lower is better)
Translates to: VGPRSRQSTVLHVQAHSAVPSPA*RSPGIR
Trigger: CCTGATCCCAGGCGAGCGCCAGGCAGGCGACGGCAC...TGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GCCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCGGTGGAGGGACTGGGTaGCTGAGTTGGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: AWERSGKWAQEADRARSSGGGTG*LSWVRG
Trigger: GCCCCTCACCCAACTCAGCCACCCAGTCCCTCCACC...GGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCGGGCGGTGGGGGTGGTaGAGGGACTGGGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: ERSGKWAQEADRARSSMCGRWGW*RDWVAE
Trigger: CTCAGCCACCCAGTCCCTCCACCACCCCCACCGCCC...GCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGCAGGCCCCGGGACAGCATaGGGGGTGCACAGGGCACGG +
Preference number: 4 (lower is better)
Translates to: RQSTVLHVQAHSAPAPTAGPGTA*GVHRAR
Trigger: CCGTGCCCTGTGCACCCCCCATGCTGTCCCGGGGCC...TGCTGTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp TGCTCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTTCTGGGTGCCGAAGTaGAGCTCCAGGTCGAGGTAT +
Preference number: 4 (lower is better)
Translates to: CSEPGAQWPRTSAVSGLPFWVPK*SSRSRY
Trigger: ATACCTCGACCTGGAGCTCCACTTCGGCACCCAGAA...GGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp AGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGGTTTAGCAGGTTTCTaGGTGCCGAAGTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RARGTVAPDLGSVWAALSGLAGF*VPKWSS
Trigger: GGAGCTCCACTTCGGCACCCAGAAACCTGCTAAACC...CGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp TGCTCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCGCTGATAGTGCCATaGAGGTCAGCCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: CSEPGAQWPRTSAVSGLPSLIVP*RSARSL
Trigger: CAGTGACCTGGCTGACCTCCATGGCACTATCAGCGA...GGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCAAGCCTCAGAGGTGGTaGCCTTGGAATCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: QSPGHSGPGPRQCLGCPLKPQRW*PWNPPQ
Trigger: TTGGGGAGGATTCCAAGGCCACCACCTCTGAGGCTT...GAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GTGCTCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCAGAAAGCCTCAGAGGTaGTGGCCTTGGAATCCTCCC +
Preference number: 4 (lower is better)
Translates to: VLRARGTVAPDLGSVWAARKPQR*WPWNPP
Trigger: GGGAGGATTCCAAGGCCACCACCTCTGAGGCTTTCT...GGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCGACCTCGGCAGTGTCTaGGCTGCCCTCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GPKKPTEHGPPCAGTLSTDLGSV*AALSAS
Trigger: GGAGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTC...GGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp AAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACGAGCCCGGGGCACAGTaGCCCCGGACCTCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: KPTEHGPPCAGTLSTCSYEPGAQ*PRTSAV
Trigger: CACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTC...GTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp CCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATCACCAGGCCAGGGGTaGAACCATCCCGGAGCTGCG +
Preference number: 4 (lower is better)
Translates to: PGSEVGSGPKKPTEHGPPSPGQG*NHPGAA
Trigger: CGCAGCTCCGGGATGGTTTCACCCCTGGCCTGGTGA...TGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp TGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACTCTCAGGGAGGGACGTaGCGTCGCCTGCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: WAQEADRARSSMCRHTQHSQGGT*RRLPGA
Trigger: AGCGCCAGGCAGGCGACGGCACGTCCCTCCCTGAGA...GTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp TGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACGTGGGGAGGGTGCCCTaGTGCTGTCCAGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: WAQEADRARSSMCRHTQHVGRVP*CCPGWR
Trigger: ACGCCAGCCTGGACAGCAGCAGGGCACCCTCCCCAC...GTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp TGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACGTCGAGCGCCCGAAGTaGTGGCTGGGCCGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: WAQEADRARSSMCRHTQHVERPK*WLGRLQ
Trigger: CTGGAGACGGCCCAGCCAGCACTTCGGGCGCTCGAC...GTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp AAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGGCCCTCCCCGGCCTaGAGGTCACTCAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: KPTEHGPPCAGTLSTCSYRPSPA*RSLSAR
Trigger: GCGAGCGCTGAGTGACCTGCAGGCCGGGGAGGGCCT...GTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp AGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGGATGTGCAGGAAGGTaGACTTCCCATCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: RARGTVAPDLGSVWAALSGCAGR*TSHPLS
Trigger: AGACAGTGGATGGGAAGTCCACCTTCCTGCACATCC...CGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp CCTGACAGCCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGTCCCTTGGACCCGGATaGTGGACGGCAGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: PDSLGAKWEVGPRSRQSTSLGPG*WTAGSP
Trigger: CGGAGATCCTGCCGTCCAGCATCCGGGTCCAAGGGA...CGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGGCTGTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp AGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGTAGCCCAGGAAGCATaGGATTTTCTCCTGACAGAG +
Preference number: 4 (lower is better)
Translates to: RARGTVAPDLGSVWAALSVAQEA*DFLLTE
Trigger: CTCTGTCAGGAGAAAATCGCATGCTTCCTGGGCTAC...CGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp CGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGCAGAGAGGCTGGCGGTGTaGTCAGAGCCCGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: RQSTVLHVQAHSAPAPTAERLAV*SEPGAQ
Trigger: CTGTGCCCCGGGCTCTGAGCACACCGCCAGCCTCTC...TGCTGTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCATCCAGACAGGCCCGTaGCCGCGAAGTGTGAAGCCG +
Preference number: 4 (lower is better)
Translates to: GPKKPTEHGPPCAGTLSTIQTGP*PRSVKP
Trigger: CGGCTTCACACTTCGCGGCCACGGGCCTGTCTGGAT...GGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCAGCGCCGACGACGGGTTaGGTGAGTCCAGAGAATCGG +
Preference number: 4 (lower is better)
Translates to: PGSEVGSGPKKPTEHGPPAPTTG*VSPENR
Trigger: CCGATTCTCTGGACTCACCCAACCCGTCGTCGGCGC...TGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCACTTGGACCCGGATGCTaGACGGCAGGATCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: PGSEVGSGPKKPTEHGPPLGPGC*TAGSPP
Trigger: TGGCGGAGATCCTGCCGTCCAGCATCCGGGTCCAAG...TGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CCTGACAGCCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGGGTGGTGGAGGGACTaGGTGGCTGAGTTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PDSLGAKWEVGPRSRQSTGWWRD*VAELGE
Trigger: CTCACCCAACTCAGCCACCCAGTCCCTCCACCACCC...CGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGGCTGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCCGCTTGACGCTCATGTaGCTGGTCTCACTGCGCCGG +
Preference number: 4 (lower is better)
Translates to: GPKKPTEHGPPCAGTLSTRLTLM*LVSLRR
Trigger: CCGGCGCAGTGAGACCAGCCACATGAGCGTCAAGCG...GGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGATGCTCATCAGCACCTaGCGCAGCTCCGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: AQEADRARSSMCRHTQHLMLIST*RSSAGL
Trigger: GAGCCCCGCGGAGCTGCGCCAGGTGCTGATGAGCAT...CAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTCAAACTCCAGGATCTTaGCGAGCTTCCGACTGTTTT +
Preference number: 4 (lower is better)
Translates to: PGAQWPRTSAVSGLPSRPQTPGS*RASDCF
Trigger: AAAACAGTCGGAAGCTCGCCAAGATCCTGGAGTTTG...AGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCTCCCATCCACTGTCTTaGTGGAGTTCAGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: QSPGHSGPGPRQCLGCPLSHPLS*WSSALS
Trigger: TGACAGAGCTGAACTCCACCAAGACAGTGGATGGGA...GAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp TGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCAGCCAGGGGCACGGTaGGCAGGTCCTGAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: WAQEADRARSSMCRHTQHQPGAR*AGPEQS
Trigger: GCTTTGCTCAGGACCTGCCCACCGTGCCCCTGGCTG...GTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GCCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCTCCCCAGGCAGCTCATaGTGGCCTCTTTCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: AWERSGKWAQEADRARSSSPGSS*WPLSVV
Trigger: CACCACCGAAAGAGGCCACCATGAGCTGCCTGGGGA...GGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp CCTGACAGCCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGCGTGGCCGCGAAGTGTaGAGCCGAAGCTCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: PDSLGAKWEVGPRSRQSTRGREV*SRSSCC
Trigger: GCAACAAGAGCTTCGGCTTCACACTTCGCGGCCACG...CGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGGCTGTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp GGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCCGACGACGGGTTGGGTaGGTCCAGAGAATCGGAGTC +
Preference number: 4 (lower is better)
Translates to: GPKKPTEHGPPCAGTLSTRRRVG*VQRIGV
Trigger: GACTCCGATTCTCTGGACTCACCCAACCCGTCGTCG...GGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp AGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTGTGCGCGGCACAGCTTaGCCAGGAGGCCCTGAGACA +
Preference number: 4 (lower is better)
Translates to: RSRQSTVLHVQAHSAPAPVRGTA*PGGPET
Trigger: TGTCTCAGGGCCTCCTGGGCAAGCTGTGCCGCGCAC...AGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp GGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCAACTGCCACAGGACCTaGTTGGCAGGGGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GPKKPTEHGPPCAGTLSTNCHRT*LAGVSS
Trigger: GCTGGACACCCCTGCCAAGCAGGTCCTGTGGCAGTT...GGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp GACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGCATGGGAGGGTGCCCTGCTaGTGTCCAGGCTGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: DRARSSMCRHTQHLLLQHGRVPC*CPGWRR
Trigger: CCTACGCCAGCCTGGACAGCAGCAGGGCACCCTCCC...ATGCTGTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp TGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACGGTGGTGGTCGCCTATaGTCCGCTGCAGAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: WAQEADRARSSMCRHTQHGGGRL*SAAEPR
Trigger: TCTCGGCTCTGCAGCGGAGCATAGGCGACCACCACC...GTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCCTGAAGGTCCTCCCTTaGACCCGGATGCTGGACGGC +
Preference number: 4 (lower is better)
Translates to: ERSGKWAQEADRARSSMCLKVLP*TRMLDG
Trigger: GCCGTCCAGCATCCGGGTCCAAGGGAGGACCTTCAG...GCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCAAGGTGCTCCAGCTGCTaGCTGAAGGTCCTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PGSEVGSGPKKPTEHGPPRCSSC*LKVLPW
Trigger: CCAAGGGAGGACCTTCAGCCAGCAGCTGGAGCACCT...TGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp TGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACTGCCTGGCGCTCGCCTaGGATCAGGGGAAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: WAQEADRARSSMCRHTQHCLALA*DQGKRH
Trigger: ATGCCTCTTCCCCTGATCCCAGGCGAGCGCCAGGCA...GTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGGCAAGAGTCGCTCGCTaGGCCATGAGACGCCGGACA +
Preference number: 4 (lower is better)
Translates to: AQEADRARSSMCRHTQHLARVAR*AMRRRT
Trigger: TGTCCGGCGTCTCATGGCCCAGCGAGCGACTCTTGC...CAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCTGCTGCTGTCCAGGCTaGCGTAGGGGTGGGACTCAG +
Preference number: 4 (lower is better)
Translates to: ERSGKWAQEADRARSSMCCCCPG*RRGGTQ
Trigger: CTGAGTCCCACCCCTACGCCAGCCTGGACAGCAGCA...GCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp AGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCCCCGTTGGTTCACTTTaGCAGCCAGGGGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: SGPKKPTEHGPPCAGTLSPVGSL*QPGARW
Trigger: CCACCGTGCCCCTGGCTGCCAAAGTGAACCAACGGG...GCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp AAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACGCAGAGGACGCGGTGTaGCCACTGTCACCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: KPTEHGPPCAGTLSTCSYAEDAV*PLSPGQ
Trigger: CTGGCCTGGTGACAGTGGCCACACCGCGTCCTCTGC...GTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGGGTAGGAACAAGGGCTaGCAGAGGAGGGCCCGACCA +
Preference number: 4 (lower is better)
Translates to: AQEADRARSSMCRHTQHLGRNKG*QRRARP
Trigger: TGGTCGGGCCCTCCTCTGCCAGCCCTTGTTCCTACC...CAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp CCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCAGAGGATCCGGTCACCTaGCTTGAGGGCAGCATTGTC +
Preference number: 4 (lower is better)
Translates to: PGSEVGSGPKKPTEHGPPEDPVT*LEGSIV
Trigger: GACAATGCTGCCCTCAAGTCAGGTGACCGGATCCTC...TGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp GTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACTTCTTCACTGCTGCTaGTGCAGTCGCTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VGPRSRQSTVLHVQAHSALLHCC*CSRWRC
Trigger: GCAGCGCCAGCGACTGCATCAGCAGCAGTGAAGAAG...TGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp GACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGCATGCGAAGAGCAGCAGCTaGGCGAGATGTGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: DRARSSMCRHTQHLLLQHAKSSS*ARCAGS
Trigger: GGAGCCCGCACATCTCGCGCAGCTGCTGCTCTTCGC...ATGCTGTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp TCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTGGACGACATGACCATTaGAAACTTGTCCTCGCTAGA +
Preference number: 4 (lower is better)
Translates to: SEPGAQWPRTSAVSGLPSGRHDH*KLVLAR
Trigger: TCTAGCGAGGACAAGTTTGCAATGGTCATGTCGTCC...AGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCACTGCCCTGCAGCATaGACACCACCTTGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: AQEADRARSSMCRHTQHLHCPAA*TPPCRG
Trigger: CCCACGACAAGGTGGTGTCCATGCTGCAGGGCAGTG...CAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGCAGCCACAGGACCTGCTTaGCAGGGGTGTCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: RQSTVLHVQAHSAPAPTAATGPA*QGCPAQ
Trigger: CTGTGCTGGACACCCCTGCCAAGCAGGTCCTGTGGC...TGCTGTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp TGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACGGTCAGCCAGGTCACTaGTCAGGGCCCGTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: WAQEADRARSSMCRHTQHGQPGH*SGPVGS
Trigger: TGAACCAACGGGCCCTGACCAGTGACCTGGCTGACC...GTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp AGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTGGCCTCTTTCGGTGGTaGTCGCCTATGCTCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RSRQSTVLHVQAHSAPAPGLFRW*SPMLRC
Trigger: GCAGCGGAGCATAGGCGACCACCACCGAAAGAGGCC...AGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp AGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTGGTGGCCTCTTTCGGTaGTGGTCGCCTATGCTCCGC +
Preference number: 4 (lower is better)
Translates to: RSRQSTVLHVQAHSAPAPGGLFR*WSPMLR
Trigger: GCGGAGCATAGGCGACCACCACCGAAAGAGGCCACC...AGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCAGAGCGAAGTGGGAAGTaGGCCCAAGAAGCCGACAGA +
Preference number: 4 (lower is better)
Translates to: PGSEVGSGPKKPTEHGPPERSGK*AQEADR
Trigger: TCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTC...TGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGAGCCTGGGAGCGAAGTaGGAAGTGGGCCCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: AQEADRARSSMCRHTQHLSLGAK*EVGPRS
Trigger: GCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGGCT...CAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp AGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCGGTGCTTCTTGGGGATaGAGATCCCCAGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SGPKKPTEHGPPCAGTLSGASWG*RSPGSS
Trigger: TGAGCTGCCTGGGGATCTTCATCCCCAAGAAGCACC...GCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp GTGCTCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCTTTGCTCATGAACTCTaGAAAGATGCCGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: VLRARGTVAPDLGSVWAAFAHEL*KDAEES
Trigger: GCTTTCTTCGGCATCTTTGCAGAGTTCATGAGCAAA...GGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp CGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGCAGCACGGTCCTCCATGTaGAGGCACACTCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: RQSTVLHVQAHSAPAPTAARSSM*RHTQHL
Trigger: CAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGC...TGCTGTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCACATCATCTTGGGGTTaGGGGTCTCAGGGAGGGACG +
Preference number: 4 (lower is better)
Translates to: ERSGKWAQEADRARSSMCTSSWG*GSQGGT
Trigger: CGTCCCTCCCTGAGACCCCCAACCCCAAGATGATGT...GCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCGGCTGACATCATCTTaGGGTTGGGGGTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: AQEADRARSSMCRHTQHLRLTSS*GWGSQG
Trigger: TCCCTGAGACCCCCAACCCCAAGATGATGTCAGCCG...CAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGCAGGGAAGCCCGGGATTTaGACACGGTCCCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: RQSTVLHVQAHSAPAPTAGKPGI*TRSPSS
Trigger: GGAAGATGGGGACCGTGTCCAAATCCCGGGCTTCCC...TGCTGTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACGGCTTCGCACAGGGTaGGAGAAGGTGAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: VGPRSRQSTVLHVQAHSARLRTG*EKVKSF
Trigger: GAAGCTCTTCACCTTCTCCCACCCTGTGCGAAGCCG...TGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp GACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGCATGCTTCCGACTGTTTTTaGGCTCCAGGGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: DRARSSMCRHTQHLLLQHASDCF*APGRPG
Trigger: GCCAGGCCTCCCTGGAGCTCAAAAACAGTCGGAAGC...ATGCTGTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp CCTGACAGCCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGCAAGCATTCAAGGCTaGCTCGGATCTCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: PDSLGAKWEVGPRSRQSTASIQG*LGSPLS
Trigger: AGACAGAGGAGATCCGAGGCAGCCTTGAATGCTTGC...CGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGGCTGTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp TGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCGAGCTGACCCCAGATaGTGCCTTCTGAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: WAQEADRARSSMCRHTQHRADPR*CLLSSP
Trigger: TGGAGAACTCAGAAGGCACCATCTGGGGTCAGCTCG...GTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCAGTTCAGGGAAGTGCTaGCTCAGCGATTTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: GPKKPTEHGPPCAGTLSTSSGKC*LSDLAR
Trigger: CCTTGCCAAATCGCTGAGCCAGCACTTCCCTGAACT...GGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACAGAGGTGGTGGCCTTaGAATCCTCCCCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: VGPRSRQSTVLHVQAHSAQRWWP*NPPQRR
Trigger: CCTTCTTTGGGGAGGATTCCAAGGCCACCACCTCTG...TGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp TGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACTCATGTCCAGTCCATTaGGGAAGAGGATCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: WAQEADRARSSMCRHTQHSCPVH*GRGSGH
Trigger: GTGACCGGATCCTCTTCCTCAATGGACTGGACATGA...GTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp GTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCAGGTAGACGTCAACGATaGGGGTGTCGATGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: VGPRSRQSTVLHVQAHSAGRRQR*GCRCSC
Trigger: ACAGGAACATCGACACCCTCATCGTTGACGTCTACC...TGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp GAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCCATGCGATTTTCTCCTaGCAGAGCTCCTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: ERSGKWAQEADRARSSMCHAIFS*QSSCSS
Trigger: TGAGGAGCAGGAGCTCTGTCAGGAGAAAATCGCATG...GCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp GCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGTCCCCATCTTCCCTTTaGAGCTGCTGTTCAGTCGAG +
Preference number: 4 (lower is better)
Translates to: AQEADRARSSMCRHTQHLSPSSL*SCCSVE
Trigger: CTCGACTGAACAGCAGCTTCAAAGGGAAGATGGGGA...CAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp CCTGACAGCCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGCTTGTATTCGGGAACTaGCAGCATCTGCAGGACGAA +
Preference number: 4 (lower is better)
Translates to: PDSLGAKWEVGPRSRQSTLVFGN*QHLQDE
Trigger: TTCGTCCTGCAGATGCTGTCAGTTCCCGAATACAAG...CGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGGCTGTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp GTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCAGTGTCGATGTTCCTGTaGTGGAAGAAGCTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: VGPRSRQSTVLHVQAHSAVSMFL*WKKLSR
Trigger: CCTCGAGAGCTTCTTCCAGCACAGGAACATCGACAC...TGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp CCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCACATTGGTTACGAAGCTaGCCTGGTCATCATGGAAGC +
Preference number: 4 (lower is better)
Translates to: PGSEVGSGPKKPTEHGPPHWLRS*PGHHGS
Trigger: GCTTCCATGATGACCAGGGCAGCTTCGTAACCAATG...TGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGCAGACACCACCTTGTCGTaGGAGCAGTTCCTCATGTCC +
Preference number: 4 (lower is better)
Translates to: RQSTVLHVQAHSAPAPTADTTLS*EQFLMS
Trigger: GGACATGAGGAACTGCTCCCACGACAAGGTGGTGTC...TGCTGTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp AGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTTCGATGTTCCTGTGCTaGAAGAAGCTCTCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RSRQSTVLHVQAHSAPAPSMFLC*KKLSRA
Trigger: GGCCCTCGAGAGCTTCTTCCAGCACAGGAACATCGA...AGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GCCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCCATCCACTGTCTTGGTaGAGTTCAGCTCTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: AWERSGKWAQEADRARSSHPLSW*SSALSE
Trigger: TTCTGACAGAGCTGAACTCCACCAAGACAGTGGATG...GGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp GACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGCATCCAGATGGTGCCTTCTaGGTTCTCCACCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: DRARSSMCRHTQHLLLQHPDGAF*VLHLFP
Trigger: TGGGAACAGGTGGAGAACTCAGAAGGCACCATCTGG...ATGCTGTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp GCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCCAGGAAGGACGACATaGCCATTGCAAACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: AQEADRARSSMCRHTQHLPGRTT*PLQTCP
Trigger: AGGACAAGTTTGCAATGGTCATGTCGTCCTTCCTGG...CAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGCAGAGAATCGGAGTCACTaGCAAATGGGACGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: RQSTVLHVQAHSAPAPTAENRSH*QMGRAL
Trigger: AAGGGCTCGTCCCATTTGCCAGTGACTCCGATTCTC...TGCTGTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp GACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGCATGAGGGGGAAATGCTCTaGCAGGCATCCTGTATCTCG +
Preference number: 4 (lower is better)
Translates to: DRARSSMCRHTQHLLLQHEGEML*QASCIS
Trigger: CGAGATACAGGATGCCTGCCAGAGCATTTCCCCCTC...ATGCTGTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CCA 90 bp CGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGCAGTTACGAAGCTGCCCTaGTCATCATGGAAGCTCATC +
Preference number: 4 (lower is better)
Translates to: RQSTVLHVQAHSAPAPTAVTKLP*SSWKLI
Trigger: GATGAGCTTCCATGATGACCAGGGCAGCTTCGTAAC...TGCTGTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR TCA 90 bp CGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGCAGCTCGAATTTGCTCATaGACTCTGCAAAGATGCCGA +
Preference number: 4 (lower is better)
Translates to: RQSTVLHVQAHSAPAPTAARICS*TLQRCR
Trigger: TCGGCATCTTTGCAGAGTTCATGAGCAAATTCGAGC...TGCTGTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR GCA 90 bp GACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGCATAGCCGAAGCTCTTGTTaGCTTTGTAGACTCGGACAG +
Preference number: 4 (lower is better)
Translates to: DRARSSMCRHTQHLLLQHSRSSC*LCRLGQ
Trigger: CTGTCCGAGTCTACAAAGGCAACAAGAGCTTCGGCT...ATGCTGTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS GCA 90 bp AGGAGGCGCTCCGGCCGCTCCTCGCTGCGGCTCCGGCGCAGTCGCTaGGCGCCCTGGGCCCGGCGTGCGCGGCACAGCTTGCCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: RRRSGRSSLRLRRSR*APWARRARHSLPRR
Trigger: CCTCCTGGGCAAGCTGTGCCGCGCACGCCGGGCCCAGGGCGCGCAGCGACTGCGCCGGAGCCGCAGCGAGGAGCGGCCGGAGCGCCTCCT
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS GCA 90 bp AGCCGGGAGCACGCCCAGACTGGGCGGCACACGTGGGCAGCGCCGTaGCAGGCGCACGAGGCGCTCGCGGCTCAGACCGCCCACCGCCAG +
Preference number: 5 (lower is better)
Translates to: SREHAQTGRHTWAAP*QAHEALAAQTAHRQ
Trigger: CTGGCGGTGGGCGGTCTGAGCCGCGAGCGCCTCGTGCGCCTGGCACGGCGCTGCCCACGTGTGCCGCCCAGTCTGGGCGTGCTCCCGGCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS CCA 90 bp GCCACCGTCGGGAGCCGGGAGCACGCCCAGACTGGGCGGCACACGTaGGCAGCGCCGTGCCAGGCGCACGAGGCGCTCGCGGCTCAGACC +
Preference number: 5 (lower is better)
Translates to: ATVGSREHAQTGRHT*AAPCQAHEALAAQT
Trigger: GGTCTGAGCCGCGAGCGCCTCGTGCGCCTGGCACGGCGCTGCCCACGTGTGCCGCCCAGTCTGGGCGTGCTCCCGGCTCCCGACGGTGGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS GCA 90 bp CTTGGGCCTTGCGCCTGCGCTCTCGGTGCACCGCGTCCGGGCGCTTaGGGCCGGCCAGGCGAAGCAGCTCACGGCCCAGAGCTAGGCCGC +
Preference number: 5 (lower is better)
Translates to: LGPCACALGAPRPGA*GRPGEAAHGPELGR
Trigger: GCGGCCTAGCTCTGGGCCGTGAGCTGCTTCGCCTGGCCGGCCGCAAGCGCCCGGACGCGGTGCACCGAGAGCGCAGGCGCAAGGCCCAAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS CCA 90 bp TCGCGGCTCAGACCGCCCACCGCCAGCCCCTCCACCTCCAGGATCTaGTCTCCTGGCCGCAGTCCTCCGGCATGCGCGCTGCTCCCCTTG +
Preference number: 5 (lower is better)
Translates to: SRLRPPTASPSTSRI*SPGRSPPACALLPL
Trigger: CAAGGGGAGCAGCGCGCATGCCGGAGGACTGCGGCCAGGAGACCAGATCCTGGAGGTGGAGGGGCTGGCGGTGGGCGGTCTGAGCCGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS-3UTR CAA 90 bp CCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTGACTGGGTGGCTGAGTaGGGTGAGGGGCTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: PGAQWPRTSAVSGLPSRPDWVAE*GEGLGQ
Trigger: CTGGCCAAGCCCCTCACCCAACTCAGCCACCCAGTC...AGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS GCA 90 bp GCAGCAGCTGCGCGAGATGTGCGGGCTCCAGGCGCCGGGGCTCCATaGTCATCAGCACCTGGCGCAGCTCCGCGGGGCTCAGCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: AAAARDVRAPGAGAP*SSAPGAAPRGSASG
Trigger: ACCTGAAGCTGAGCCCCGCGGAGCTGCGCCAGGTGCTGATGAGCATGGAGCCCCGGCGCCTGGAGCCCGCACATCTCGCGCAGCTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS GCA 90 bp TCCACCTTGCGGCTGAACTCTTGGGCCTTGCGCCTGCGCTCTCGGTaGACCGCGTCCGGGCGCTTGCGGCCGGCCAGGCGAAGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: STLRLNSWALRLRSR*TASGRLRPARRSSS
Trigger: TGAGCTGCTTCGCCTGGCCGGCCGCAAGCGCCCGGACGCGGTGCACCGAGAGCGCAGGCGCAAGGCCCAAGAGTTCAGCCGCAAGGTGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS-3UTR CAA 90 bp AGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCTGAAGGTCCTCCCTaGGACCCGGATGCTGGACGG +
Preference number: 5 (lower is better)
Translates to: RARGTVAPDLGSVWAALSAEGPP*DPDAGR
Trigger: CCGTCCAGCATCCGGGTCCAAGGGAGGACCTTCAGC...CGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS GCA 90 bp CCCTCCACCTCCAGGATCTGGTCTCCTGGCCGCAGTCCTCCGGCATaGGCGCTGCTCCCCTTGGCCACCTCCAGGACGAAGCAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: PSTSRIWSPGRSPPA*ALLPLATSRTKQGP
Trigger: TGGCCCCTGCTTCGTCCTGGAGGTGGCCAAGGGGAGCAGCGCGCATGCCGGAGGACTGCGGCCAGGAGACCAGATCCTGGAGGTGGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS-3UTR CAA 90 bp CTCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCGGGGAAGCCCGGGATTaGGACACGGTCCCCATCTTC +
Preference number: 5 (lower is better)
Translates to: LRARGTVAPDLGSVWAALGEARD*DTVPIF
Trigger: GAAGATGGGGACCGTGTCCAAATCCCGGGCTTCCCC...GAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CAA 90 bp TGCTCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCCCACCGCAAGCGCTaGACGCTCATGTGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: CSEPGAQWPRTSAVSGLPSHRKR*TLMWLV
Trigger: GACCAGCCACATGAGCGTCAAGCGCTTGCGGTGGGA...GGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS GCA 90 bp CAGAGGTGGTGGCCTTGGAATCCTCCCCAAAGAAGGCCAGCGCCTTaGCCAGCTCCTCCATGGCCTCGCGCTGCAGCCCGTCGAGCGCCC +
Preference number: 5 (lower is better)
Translates to: QRWWPWNPPQRRPAP*PAPPWPRAAARRAP
Trigger: GGGCGCTCGACGGGCTGCAGCGCGAGGCCATGGAGGAGCTGGGCAAGGCGCTGGCCTTCTTTGGGGAGGATTCCAAGGCCACCACCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS-3UTR CAA 90 bp TCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTGACTTGAGGGCAGCATaGTCAGCTGGGCTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: SEPGAQWPRTSAVSGLPSDLRAA*SAGLPG
Trigger: GCCTGGGAGCCCAGCTGACAATGCTGCCCTCAAGTC...AGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CAA 90 bp AGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGACATCATCTTGGGGTaGGGGGTCTCAGGGAGGGAC +
Preference number: 5 (lower is better)
Translates to: RARGTVAPDLGSVWAALSDIILG*GVSGRD
Trigger: GTCCCTCCCTGAGACCCCCAACCCCAAGATGATGTC...CGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CAA 90 bp CAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCACGGCTGACATCATCTaGGGGTTGGGGGTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: QSPGHSGPGPRQCLGCPLTADII*GLGVSG
Trigger: CCCTGAGACCCCCAACCCCAAGATGATGTCAGCCGT...GAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CAA 90 bp CCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCTCGGCCTAGCTTCCGACTGTTTTaGAGCTCCAGGGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PGAQWPRTSAVSGLPSRPSFRLF*SSREAW
Trigger: CCAGGCCTCCCTGGAGCTCAAAAACAGTCGGAAGCT...AGGCCGAGAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CAA 90 bp TGCTCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCACTGGTCAGGGCCCGTaGGTTCACTTTGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: CSEPGAQWPRTSAVSGLPTGQGP*VHFGSQ
Trigger: CTGGCTGCCAAAGTGAACCAACGGGCCCTGACCAGT...GGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS TCA 90 bp CCCGGATGCTGGACGGCAGGATCTCCGCCACCCACTGCAGGGAGGTaGGCGCCGACGACGGGTTGGGTGAGTCCAGAGAATCGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: PGCWTAGSPPPTAGR*APTTGWVSPENRSH
Trigger: GTGACTCCGATTCTCTGGACTCACCCAACCCGTCGTCGGCGCTCACCTCCCTGCAGTGGGTGGCGGAGATCCTGCCGTCCAGCATCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS GCA 90 bp CTCCCTTGGACCCGGATGCTGGACGGCAGGATCTCCGCCACCCACTaGAGGGAGGTGAGCGCCGACGACGGGTTGGGTGAGTCCAGAGAA +
Preference number: 5 (lower is better)
Translates to: LPWTRMLDGRISATH*REVSADDGLGESRE
Trigger: TTCTCTGGACTCACCCAACCCGTCGTCGGCGCTCACCTCCCTGCAGTGGGTGGCGGAGATCCTGCCGTCCAGCATCCGGGTCCAAGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS TCA 90 bp GGTTGTCCAGGAGTGGCCCGCAGGCCTCTCGGGGCAGCGCCAGGGTaGGAGTCCACACCAGATCATCCACCCGCTGCTCAGCTGCAAACT +
Preference number: 5 (lower is better)
Translates to: GCPGVARRPLGAAPG*ESTPDHPPAAQLQT
Trigger: AGTTTGCAGCTGAGCAGCGGGTGGATGATCTGGTGTGGACTCTCACCCTGGCGCTGCCCCGAGAGGCCTGCGGGCCACTCCTGGACAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS GCA 90 bp TCCGGGGTCAGGAAATCATCCACGATGGTGACCCGGGGGCCCAGCTaGTCGCTCAGCACGTCCAGGAAGCGGTCAGTATCGCGGCTTCGC +
Preference number: 5 (lower is better)
Translates to: SGVRKSSTMVTRGPS*SLSTSRKRSVSRLR
Trigger: GCGAAGCCGCGATACTGACCGCTTCCTGGACGTGCTGAGCGAGCAGCTGGGCCCCCGGGTCACCATCGTGGATGATTTCCTGACCCCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS GCA 90 bp CAGCTCCTCCATGGCCTCGCGCTGCAGCCCGTCGAGCGCCCGAAGTaGTGGCTGGGCCGTCTCCAGGAAGGACGACATGACCATTGCAAA +
Preference number: 5 (lower is better)
Translates to: QLLHGLALQPVERPK*WLGRLQEGRHDHCK
Trigger: TTTGCAATGGTCATGTCGTCCTTCCTGGAGACGGCCCAGCCAGCACTTCGGGCGCTCGACGGGCTGCAGCGCGAGGCCATGGAGGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CCA 90 bp TCTGAGTTCTCCACCTGTTCCCACCGCAAGCGCTTGACGCTCATGTaGCTGGTCTCACTGCGCCGGTGGCCCAGGCCCCGGGACAGCATG +
Preference number: 5 (lower is better)
Translates to: SEFSTCSHRKRLTLM*LVSLRRWPRPRDSM
Trigger: CATGCTGTCCCGGGGCCTGGGCCACCGGCGCAGTGAGACCAGCCACATGAGCGTCAAGCGCTTGCGGTGGGAACAGGTGGAGAACTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS-3UTR CAA 90 bp GGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCCGCGCCCGGTGCTTCTaGGGGATGAAGATCCCCAGG +
Preference number: 5 (lower is better)
Translates to: GPKKPTEHGPPCAGTLSTRARCF*GMKIPR
Trigger: CCTGGGGATCTTCATCCCCAAGAAGCACCGGGCGCG...GGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS TCA 90 bp AGATGGTGCCTTCTGAGTTCTCCACCTGTTCCCACCGCAAGCGCTTaGCGCTCATGTGGCTGGTCTCACTGCGCCGGTGGCCCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: RWCLLSSPPVPTASA*RSCGWSHCAGGPGP
Trigger: GGGGCCTGGGCCACCGGCGCAGTGAGACCAGCCACATGAGCGTCAAGCGCTTGCGGTGGGAACAGGTGGAGAACTCAGAAGGCACCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS TCA 90 bp CCTTGGCAGTTGGCTGGTCCCCCAAGATTTCATCCACCTTGCGGCTaGACTCTTGGGCCTTGCGCCTGCGCTCTCGGTGCACCGCGTCCG +
Preference number: 5 (lower is better)
Translates to: PWQLAGPPRFHPPCG*TLGPCACALGAPRP
Trigger: CGGACGCGGTGCACCGAGAGCGCAGGCGCAAGGCCCAAGAGTTCAGCCGCAAGGTGGATGAAATCTTGGGGGACCAGCCAACTGCCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS CCA 90 bp CACTGGCAAATGGGACGAGCCCTTCCTCCACCACCAGCGTGGGCATaGCACCACTGCCCTGCAGCATGGACACCACCTTGTCGTGGGAGC +
Preference number: 5 (lower is better)
Translates to: HWQMGRALPPPPAWA*HHCPAAWTPPCRGS
Trigger: GCTCCCACGACAAGGTGGTGTCCATGCTGCAGGGCAGTGGTGCCATGCCCACGCTGGTGGTGGAGGAAGGGCTCGTCCCATTTGCCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CCA 90 bp CTCCTCCATGGCCTCGCGCTGCAGCCCGTCGAGCGCCCGAAGTGCTaGCTGGGCCGTCTCCAGGAAGGACGACATGACCATTGCAAACTT +
Preference number: 5 (lower is better)
Translates to: LLHGLALQPVERPKC*LGRLQEGRHDHCKL
Trigger: AAGTTTGCAATGGTCATGTCGTCCTTCCTGGAGACGGCCCAGCCAGCACTTCGGGCGCTCGACGGGCTGCAGCGCGAGGCCATGGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS-3UTR CAA 90 bp GTGCTCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCACAAACTCCAGGATCTaGGCGAGCTTCCGACTGTTT +
Preference number: 5 (lower is better)
Translates to: VLRARGTVAPDLGSVWAATNSRI*ASFRLF
Trigger: AAACAGTCGGAAGCTCGCCAAGATCCTGGAGTTTGT...GGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CAA 90 bp GAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCGCCCGTTGGTTCACTTaGGCAGCCAGGGGCACGGTG +
Preference number: 5 (lower is better)
Translates to: ERSGKWAQEADRARSSMCARWFT*AARGTV
Trigger: CACCGTGCCCCTGGCTGCCAAAGTGAACCAACGGGC...GCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CAA 90 bp CTCAGAGCCCGGGGCACAGTGGCCCCGGACCTCGGCAGTGTCTGGGCTGCCCTCAGCGCTCGCTCGAATTaGCTCATGAACTCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: LRARGTVAPDLGSVWAALSARSN*LMNSAK
Trigger: CTTTGCAGAGTTCATGAGCAAATTCGAGCGAGCGCT...GAGGGCAGCCCAGACACTGCCGAGGTCCGGGGCCACTGTGCCCCGGGCTCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS TCA 90 bp TCTCCTCGTAGTCGTTCTCCGGGGTCAGGAAATCATCCACGATGGTaGCCCGGGGGCCCAGCTGCTCGCTCAGCACGTCCAGGAAGCGGT +
Preference number: 5 (lower is better)
Translates to: SPRSRSPGSGNHPRW*PGGPAARSARPGSG
Trigger: ACCGCTTCCTGGACGTGCTGAGCGAGCAGCTGGGCCCCCGGGTCACCATCGTGGATGATTTCCTGACCCCGGAGAACGACTACGAGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS GCA 90 bp ATGGGACGAGCCCTTCCTCCACCACCAGCGTGGGCATGGCACCACTaGCCTGCAGCATGGACACCACCTTGTCGTGGGAGCAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: MGRALPPPPAWAWHH*PAAWTPPCRGSSSS
Trigger: TGAGGAACTGCTCCCACGACAAGGTGGTGTCCATGCTGCAGGGCAGTGGTGCCATGCCCACGCTGGTGGTGGAGGAAGGGCTCGTCCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS-3UTR CAA 90 bp GAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCTGCCACAGGACCTGCTaGGCAGGGGTGTCCAGCACA +
Preference number: 5 (lower is better)
Translates to: ERSGKWAQEADRARSSMCCHRTC*AGVSST
Trigger: TGTGCTGGACACCCCTGCCAAGCAGGTCCTGTGGCA...GCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CAA 90 bp GCCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCCTGCGCAGGCGTGTCTaGTATTCGGGAACTGACAGC +
Preference number: 5 (lower is better)
Translates to: AWERSGKWAQEADRARSSLRRRV*YSGTDS
Trigger: GCTGTCAGTTCCCGAATACAAGACACGCCTGCGCAG...GGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS GCA 90 bp CGGGGCAGCGCCAGGGTGAGAGTCCACACCAGATCATCCACCCGCTaGTCAGCTGCAAACTGCTTCAGTGCAGCGAACACCTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RGSARVRVHTRSSTR*SAANCFSAANTCSL
Trigger: CAAGGAGCAGGTGTTCGCTGCACTGAAGCAGTTTGCAGCTGAGCAGCGGGTGGATGATCTGGTGTGGACTCTCACCCTGGCGCTGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS-3UTR CAA 90 bp AGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTAGCGCCGACGACGGGTaGGGTGAGTCCAGAGAATCG +
Preference number: 5 (lower is better)
Translates to: RSRQSTVLHVQAHSAPAPSADDG*GESRES
Trigger: CGATTCTCTGGACTCACCCAACCCGTCGTCGGCGCT...AGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CAA 90 bp CGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGCAGCGCTGCTCCGCTCATaGGTTACGAAGCTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: RQSTVLHVQAHSAPAPTAALLRS*VTKLPW
Trigger: CCAGGGCAGCTTCGTAACCAATGAGCGGAGCAGCGC...TGCTGTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS CCA 90 bp CTTCCTCCACCACCAGCGTGGGCATGGCACCACTGCCCTGCAGCATaGACACCACCTTGTCGTGGGAGCAGTTCCTCATGTCCAGTCCAT +
Preference number: 5 (lower is better)
Translates to: LPPPPAWAWHHCPAA*TPPCRGSSSSCPVH
Trigger: ATGGACTGGACATGAGGAACTGCTCCCACGACAAGGTGGTGTCCATGCTGCAGGGCAGTGGTGCCATGCCCACGCTGGTGGTGGAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS TCA 90 bp CAGGCAGGACAGACTCGATCCAGACAGGCCCGTGGCCGCGAAGTGTaGAGCCGAAGCTCTTGTTGCCTTTGTAGACTCGGACAGTCCTGC +
Preference number: 5 (lower is better)
Translates to: QAGQTRSRQARGREV*SRSSCCLCRLGQSC
Trigger: GCAGGACTGTCCGAGTCTACAAAGGCAACAAGAGCTTCGGCTTCACACTTCGCGGCCACGGGCCTGTCTGGATCGAGTCTGTCCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS GCA 90 bp CGCCAGGGTGAGAGTCCACACCAGATCATCCACCCGCTGCTCAGCTaGAAACTGCTTCAGTGCAGCGAACACCTGCTCCTTGGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: RQGESPHQIIHPLLS*KLLQCSEHLLLGSW
Trigger: CCAACTGCCAAGGAGCAGGTGTTCGCTGCACTGAAGCAGTTTGCAGCTGAGCAGCGGGTGGATGATCTGGTGTGGACTCTCACCCTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS CCA 90 bp GGCTCCGGCCCCGGCACCGGTTTAGCAGGTTTCTGGGTGCCGAAGTaGAGCTCCAGGTCGAGGTATTTCACCATGTCACTCAGCTTATCG +
Preference number: 5 (lower is better)
Translates to: GSGPGTGLAGFWVPK*SSRSRYFTMSLSLS
Trigger: CGATAAGCTGAGTGACATGGTGAAATACCTCGACCTGGAGCTCCACTTCGGCACCCAGAAACCTGCTAAACCGGTGCCGGGGCCGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CCA 90 bp TCAAGGCTGCCTCGGATCTCCTCTGTCTTCTCCTGGAGGGTGGCCTaGAAGTGGAGGCTGCGCAGGCGTGTCTTGTATTCGGGAACTGAC +
Preference number: 5 (lower is better)
Translates to: SRLPRISSVFSWRVA*KWRLRRRVLYSGTD
Trigger: GTCAGTTCCCGAATACAAGACACGCCTGCGCAGCCTCCACTTCCAGGCCACCCTCCAGGAGAAGACAGAGGAGATCCGAGGCAGCCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CCA 90 bp TGGCGCAAGCATTCAAGGCTGCCTCGGATCTCCTCTGTCTTCTCCTaGAGGGTGGCCTGGAAGTGGAGGCTGCGCAGGCGTGTCTTGTAT +
Preference number: 5 (lower is better)
Translates to: WRKHSRLPRISSVFS*RVAWKWRLRRRVLY
Trigger: ATACAAGACACGCCTGCGCAGCCTCCACTTCCAGGCCACCCTCCAGGAGAAGACAGAGGAGATCCGAGGCAGCCTTGAATGCTTGCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS-3UTR CAA 90 bp GAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCATCCGGTCACCTGACTaGAGGGCAGCATTGTCAGCT +
Preference number: 5 (lower is better)
Translates to: ERSGKWAQEADRARSSMCIRSPD*RAALSA
Trigger: AGCTGACAATGCTGCCCTCAAGTCAGGTGACCGGAT...GCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CAA 90 bp CGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACAGCAAGCATGGACACCACCTaGTCGTGGGAGCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: RQSTVLHVQAHSAPAPTASMDTT*SWEQFL
Trigger: GAGGAACTGCTCCCACGACAAGGTGGTGTCCATGCT...TGCTGTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CAA 90 bp CCTGACAGCCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGAAGCCCGTAGTCTTGTaGGTTTTGGGCTGTCCATCG +
Preference number: 5 (lower is better)
Translates to: PDSLGAKWEVGPRSRQSTKPVVL*VLGCPS
Trigger: CGATGGACAGCCCAAAACCAACAAGACTACGGGCTT...CGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGGCTGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CAA 90 bp GCCTGGGAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCTTGAAGCCCGTAGTCTaGTTGGTTTTGGGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: AWERSGKWAQEADRARSSLKPVV*LVLGCP
Trigger: TGGACAGCCCAAAACCAACAAGACTACGGGCTTCAA...GGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS TCA 90 bp TCTCCTGACAGAGCTCCTGCTCCTCATAGGTCAGCAGCTGGTAGATaGACTGCCACAGGACCTGCTTGGCAGGGGTGTCCAGCACAGGGT +
Preference number: 5 (lower is better)
Translates to: SPDRAPAPHRSAAGR*TATGPAWQGCPAQG
Trigger: ACCCTGTGCTGGACACCCCTGCCAAGCAGGTCCTGTGGCAGTTCATCTACCAGCTGCTGACCTATGAGGAGCAGGAGCTCTGTCAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS TCA 90 bp CAGAGATGGAGGAGTAGGTCAGGGAGCTGCCTTCTTCACTGCTGCTaGTGCAGTCGCTGGCGCTGCTCCGCTCATTGGTTACGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: QRWRSRSGSCLLHCC*CSRWRCSAHWLRSC
Trigger: GCAGCTTCGTAACCAATGAGCGGAGCAGCGCCAGCGACTGCATCAGCAGCAGTGAAGAAGGCAGCTCCCTGACCTACTCCTCCATCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS GCA 90 bp CAGCTCAGGCTCCGGCTCTGTCATGGCCGTGTAGCCCAGGAAGCATaGGATTTTCTCCTGACAGAGCTCCTGCTCCTCATAGGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: QLRLRLCHGRVAQEA*DFLLTELLLLIGQQ
Trigger: CTGCTGACCTATGAGGAGCAGGAGCTCTGTCAGGAGAAAATCGCATGCTTCCTGGGCTACACGGCCATGACAGAGCCGGAGCCTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435185.5
ENST00000452113.5
CDS GCA 90 bp GTGAGAGTCCACACCAGATCATCCACCCGCTGCTCAGCTGCAAACTaGTTCAGTGCAGCGAACACCTGCTCCTTGGCAGTTGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: VRVHTRSSTRCSAAN*FSAANTCSLAVGWS
Trigger: GGACCAGCCAACTGCCAAGGAGCAGGTGTTCGCTGCACTGAAGCAGTTTGCAGCTGAGCAGCGGGTGGATGATCTGGTGTGGACTCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS GCA 90 bp CTCAGGCTCCGGCTCTGCTGTCATGGCCGTGTAGCCCAGGAAGCATaGGATTTTCTCCTGACAGAGCTCCTGCTCCTCATAGGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: LRLRLCCHGRVAQEA*DFLLTELLLLIGQQ
Trigger: CTGCTGACCTATGAGGAGCAGGAGCTCTGTCAGGAGAAAATCGCATGCTTCCTGGGCTACACGGCCATGACAGCAGAGCCGGAGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS-3UTR CAA 90 bp GTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACTCATGTCCAGTCCATaGAGGAAGAGGATCCGGTCA +
Preference number: 5 (lower is better)
Translates to: VGPRSRQSTVLHVQAHSALMSSP*RKRIRS
Trigger: TGACCGGATCCTCTTCCTCAATGGACTGGACATGAG...TGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CAA 90 bp AAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACTGCTGGCTCAGCGATTaGGCAAGGATGTGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: KPTEHGPPCAGTLSTCSYCWLSD*ARMCRK
Trigger: CTTCCTGCACATCCTTGCCAAATCGCTGAGCCAGCA...GTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CAA 90 bp AGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTTCAGAGGTGGTGGCCTaGGAATCCTCCCCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: RSRQSTVLHVQAHSAPAPSEVVA*ESSPKK
Trigger: CTTCTTTGGGGAGGATTCCAAGGCCACCACCTCTGA...AGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS TCA 90 bp CTGGAGGGGAAGCCCGGGATTTGGACACGGTCCCCATCTTCCCTTTaGAGCTGCTGTTCAGTCGAGACTCAAGCTCTGCATAGACGGCTG +
Preference number: 5 (lower is better)
Translates to: LEGKPGIWTRSPSSL*SCCSVETQALHRRL
Trigger: CAGCCGTCTATGCAGAGCTTGAGTCTCGACTGAACAGCAGCTTCAAAGGGAAGATGGGGACCGTGTCCAAATCCCGGGCTTCCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS TCA 90 bp TGGCCAACACAAACTCCAGGATCTTGGCGAGCTTCCGACTGTTTTTaGGCTCCAGGGAGGCCTGGCGCAAGCATTCAAGGCTGCCTCGGA +
Preference number: 5 (lower is better)
Translates to: WPTQTPGSWRASDCF*APGRPGASIQGCLG
Trigger: TCCGAGGCAGCCTTGAATGCTTGCGCCAGGCCTCCCTGGAGCTCAAAAACAGTCGGAAGCTCGCCAAGATCCTGGAGTTTGTGTTGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS GCA 90 bp TCCACCCGCTGCTCAGCTGCAAACTGCTTCAGTGCAGCGAACACCTaGTCCTTGGCAGTTGGCTGGTCCCCCAAGATTTCATCCACCTTG +
Preference number: 5 (lower is better)
Translates to: STRCSAANCFSAANT*SLAVGWSPKISSTL
Trigger: CAAGGTGGATGAAATCTTGGGGGACCAGCCAACTGCCAAGGAGCAGGTGTTCGCTGCACTGAAGCAGTTTGCAGCTGAGCAGCGGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS CCA 90 bp AGGATCTTGGCGAGCTTCCGACTGTTTTTGAGCTCCAGGGAGGCCTaGCGCAAGCATTCAAGGCTGCCTCGGATCTCCTCTGTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RILASFRLFLSSREA*RKHSRLPRISSVFS
Trigger: GGAGAAGACAGAGGAGATCCGAGGCAGCCTTGAATGCTTGCGCCAGGCCTCCCTGGAGCTCAAAAACAGTCGGAAGCTCGCCAAGATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CCA 90 bp GCAAACTGCTTCAGTGCAGCGAACACCTGCTCCTTGGCAGTTGGCTaGTCCCCCAAGATTTCATCCACCTTGCGGCTGAACTCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: ANCFSAANTCSLAVG*SPKISSTLRLNSWA
Trigger: GGCCCAAGAGTTCAGCCGCAAGGTGGATGAAATCTTGGGGGACCAGCCAACTGCCAAGGAGCAGGTGTTCGCTGCACTGAAGCAGTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS-3UTR CAA 90 bp GAGCGAAGTGGGAAGTGGGCCCAAGAAGCCGACAGAGCACGGTCCTCCATGTGCATGACCATTGCAAACTaGTCCTCGCTAGAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: ERSGKWAQEADRARSSMCMTIAN*SSLEGE
Trigger: TTCCCCCTCTAGCGAGGACAAGTTTGCAATGGTCAT...GCACATGGAGGACCGTGCTCTGTCGGCTTCTTGGGCCCACTTCCCACTTCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS GCA 90 bp CCCAGGAGTTCAGGGAAGTGCTGGCTCAGCGATTTGGCAAGGATGTaGAGGAAGGTGGACTTCCCATCCACTGTCTTGGTGGAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: PRSSGKCWLSDLARM*RKVDFPSTVLVEFS
Trigger: GCTGAACTCCACCAAGACAGTGGATGGGAAGTCCACCTTCCTGCACATCCTTGCCAAATCGCTGAGCCAGCACTTCCCTGAACTCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CCA 90 bp AGCTGCAAACTGCTTCAGTGCAGCGAACACCTGCTCCTTGGCAGTTaGCTGGTCCCCCAAGATTTCATCCACCTTGCGGCTGAACTCTTG +
Preference number: 5 (lower is better)
Translates to: SCKLLQCSEHLLLGS*LVPQDFIHLAAELL
Trigger: CAAGAGTTCAGCCGCAAGGTGGATGAAATCTTGGGGGACCAGCCAACTGCCAAGGAGCAGGTGTTCGCTGCACTGAAGCAGTTTGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS-3UTR CAA 90 bp AAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACGTAGTCTTGTTGGTTTaGGGCTGTCCATCGTTGAGA +
Preference number: 5 (lower is better)
Translates to: KPTEHGPPCAGTLSTCSYVVLLV*GCPSLR
Trigger: TCTCAACGATGGACAGCCCAAAACCAACAAGACTAC...GTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS-3UTR CAA 90 bp AGAAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTAGCTCTGTCAGAAAGTaGATCTTGAAGCCCGTAGTC +
Preference number: 5 (lower is better)
Translates to: RSRQSTVLHVQAHSAPAPSSVRK*ILKPVV
Trigger: GACTACGGGCTTCAAGATCAACTTTCTGACAGAGCT...AGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS CCA 90 bp GACATGACCATTGCAAACTTGTCCTCGCTAGAGGGGGAAATGCTCTaGCAGGCATCCTGTATCTCGCTGATAGTGCCATGGAGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: DMTIANLSSLEGEML*QASCISLIVPWRSA
Trigger: GGCTGACCTCCATGGCACTATCAGCGAGATACAGGATGCCTGCCAGAGCATTTCCCCCTCTAGCGAGGACAAGTTTGCAATGGTCATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS-3UTR CAA 90 bp AAGCCGACAGAGCACGGTCCTCCATGTGCAGGCACACTCAGCACCTGCTCCTACGTCAGAAAGTTGATCTaGAAGCCCGTAGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: KPTEHGPPCAGTLSTCSYVRKLI*KPVVLL
Trigger: CAACAAGACTACGGGCTTCAAGATCAACTTTCTGAC...GTAGGAGCAGGTGCTGAGTGTGCCTGCACATGGAGGACCGTGCTCTGTCGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS CCA 72 bp GGGAGCCGGGAGCACGCCCAGACTGGGCGGCACACGTaGGCAGCGCCGTGCCAGGCGCACGAGGCGCTCGCG +
Preference number: 6 (lower is better)
Translates to: GSREHAQTGRHT*AAPCQAHEALA
Trigger: CGCGAGCGCCTCGTGCGCCTGGCACGGCGCTGCCCACGTGTGCCGCCCAGTCTGGGCGTGCTCCCGGCTCCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS CCA 72 bp CGGGGCCACCGTCGGGAGCCGGGAGCACGCCCAGACTaGGCGGCACACGTGGGCAGCGCCGTGCCAGGCGCA +
Preference number: 6 (lower is better)
Translates to: RGHRREPGARPD*AAHVGSAVPGA
Trigger: TGCGCCTGGCACGGCGCTGCCCACGTGTGCCGCCCAGTCTGGGCGTGCTCCCGGCTCCCGACGGTGGCCCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS GCA 72 bp CACGCCCAGACTGGGCGGCACACGTGGGCAGCGCCGTaGCAGGCGCACGAGGCGCTCGCGGCTCAGACCGCC +
Preference number: 6 (lower is better)
Translates to: HAQTGRHTWAAP*QAHEALAAQTA
Trigger: GGCGGTCTGAGCCGCGAGCGCCTCGTGCGCCTGGCACGGCGCTGCCCACGTGTGCCGCCCAGTCTGGGCGTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS GCA 72 bp TGCGCCTGCGCTCTCGGTGCACCGCGTCCGGGCGCTTaGGGCCGGCCAGGCGAAGCAGCTCACGGCCCAGAG +
Preference number: 6 (lower is better)
Translates to: CACALGAPRPGA*GRPGEAAHGPE
Trigger: CTCTGGGCCGTGAGCTGCTTCGCCTGGCCGGCCGCAAGCGCCCGGACGCGGTGCACCGAGAGCGCAGGCGCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS GCA 72 bp TGCTCCTCGTCGGCGTCGGGCGCGAAGAGCAGCAGCTaGGCGAGATGTGCGGGCTCCAGGCGCCGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: CSSSASGAKSSS*ARCAGSRRRGS
Trigger: GGAGCCCCGGCGCCTGGAGCCCGCACATCTCGCGCAGCTGCTGCTCTTCGCGCCCGACGCCGACGAGGAGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CAA 90 bp TCTTGGGCCTTGCGCCTGCGCTCTCGGTGCACCGCGTCCGGGCGCTaGCGGCCGGCCAGGCGAAGCAGCTCACGGCCCAGAGCTAGGCCG +
Preference number: 6 (lower is better)
Translates to: SWALRLRSRCTASGR*RPARRSSSRPRARP
Trigger: CGGCCTAGCTCTGGGCCGTGAGCTGCTTCGCCTGGCCGGCCGCAAGCGCCCGGACGCGGTGCACCGAGAGCGCAGGCGCAAGGCCCAAGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS GCA 72 bp GCGCGAGATGTGCGGGCTCCAGGCGCCGGGGCTCCATaGTCATCAGCACCTGGCGCAGCTCCGCGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: ARDVRAPGAGAP*SSAPGAAPRGS
Trigger: TGAGCCCCGCGGAGCTGCGCCAGGTGCTGATGAGCATGGAGCCCCGGCGCCTGGAGCCCGCACATCTCGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS GCA 72 bp TCTGGTCTCCTGGCCGCAGTCCTCCGGCATGCGCGCTaGTCCCCTTGGCCACCTCCAGGACGAAGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: SGLLAAVLRHAR*SPWPPPGRSRG
Trigger: GCCCCTGCTTCGTCCTGGAGGTGGCCAAGGGGAGCAGCGCGCATGCCGGAGGACTGCGGCCAGGAGACCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS TCA 72 bp GTAGCAGGGGGAGGGCAAGAGTCGCTCGCTGGGCCATaGGACGCCGGACAGGGTCCTGGGCCCTGTGGTGAC +
Preference number: 6 (lower is better)
Translates to: VAGGGQESLAGP*DAGQGPGPCGD
Trigger: GTCACCACAGGGCCCAGGACCCTGTCCGGCGTCTCATGGCCCAGCGAGCGACTCTTGCCCTCCCCCTGCTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS GCA 72 bp ACCCGGATGCTGGACGGCAGGATCTCCGCCACCCACTaGAGGGAGGTGAGCGCCGACGACGGGTTGGGTGAG +
Preference number: 6 (lower is better)
Translates to: TRMLDGRISATH*REVSADDGLGE
Trigger: CTCACCCAACCCGTCGTCGGCGCTCACCTCCCTGCAGTGGGTGGCGGAGATCCTGCCGTCCAGCATCCGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CCA 72 bp TCCACCTGTTCCCACCGCAAGCGCTTGACGCTCATGTaGCTGGTCTCACTGCGCCGGTGGCCCAGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: STCSHRKRLTLM*LVSLRRWPRPR
Trigger: CCGGGGCCTGGGCCACCGGCGCAGTGAGACCAGCCACATGAGCGTCAAGCGCTTGCGGTGGGAACAGGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CAA 90 bp TCAGAGGTGGTGGCCTTGGAATCCTCCCCAAAGAAGGCCAGCGCCTaGCCCAGCTCCTCCATGGCCTCGCGCTGCAGCCCGTCGAGCGCC +
Preference number: 6 (lower is better)
Translates to: SEVVALESSPKKASA*PSSSMASRCSPSSA
Trigger: GGCGCTCGACGGGCTGCAGCGCGAGGCCATGGAGGAGCTGGGCAAGGCGCTGGCCTTCTTTGGGGAGGATTCCAAGGCCACCACCTCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CCA 72 bp TTGGGGGTCTCAGGGAGGGACGTGCCGTCGCCTGCCTaGCGCTCGCCTGGGATCAGGGGAAGAGGCATCTCA +
Preference number: 6 (lower is better)
Translates to: LGVSGRDVPSPA*RSPGIRGRGIS
Trigger: TGAGATGCCTCTTCCCCTGATCCCAGGCGAGCGCCAGGCAGGCGACGGCACGTCCCTCCCTGAGACCCCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS GCA 72 bp GCCCTTCCTCCACCACCAGCGTGGGCATGGCACCACTaGCCTGCAGCATGGACACCACCTTGTCGTGGGAGC +
Preference number: 6 (lower is better)
Translates to: ALPPPPAWAWHH*PAAWTPPCRGS
Trigger: GCTCCCACGACAAGGTGGTGTCCATGCTGCAGGGCAGTGGTGCCATGCCCACGCTGGTGGTGGAGGAAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CCA 72 bp TCGCGCTGCAGCCCGTCGAGCGCCCGAAGTGCTGGCTaGGCCGTCTCCAGGAAGGACGACATGACCATTGCA +
Preference number: 6 (lower is better)
Translates to: SRCSPSSARSAG*AVSRKDDMTIA
Trigger: TGCAATGGTCATGTCGTCCTTCCTGGAGACGGCCCAGCCAGCACTTCGGGCGCTCGACGGGCTGCAGCGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS TCA 72 bp TGGACGGCAGGATCTCCGCCACCCACTGCAGGGAGGTaGGCGCCGACGACGGGTTGGGTGAGTCCAGAGAAT +
Preference number: 6 (lower is better)
Translates to: WTAGSPPPTAGR*APTTGWVSPEN
Trigger: ATTCTCTGGACTCACCCAACCCGTCGTCGGCGCTCACCTCCCTGCAGTGGGTGGCGGAGATCCTGCCGTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CAA 72 bp AAGATTTCATCCACCTTGCGGCTGAACTCTTGGGCCTaGCGCCTGCGCTCTCGGTGCACCGCGTCCGGGCGC +
Preference number: 6 (lower is better)
Translates to: KISSTLRLNSWA*RLRSRCTASGR
Trigger: GCGCCCGGACGCGGTGCACCGAGAGCGCAGGCGCAAGGCCCAAGAGTTCAGCCGCAAGGTGGATGAAATCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS CAA 90 bp CAGATGGTGCCTTCTGAGTTCTCCACCTGTTCCCACCGCAAGCGCTaGACGCTCATGTGGCTGGTCTCACTGCGCCGGTGGCCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: QMVPSEFSTCSHRKR*TLMWLVSLRRWPRP
Trigger: GGGCCTGGGCCACCGGCGCAGTGAGACCAGCCACATGAGCGTCAAGCGCTTGCGGTGGGAACAGGTGGAGAACTCAGAAGGCACCATCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS TCA 72 bp AGTCGTTCTCCGGGGTCAGGAAATCATCCACGATGGTaGCCCGGGGGCCCAGCTGCTCGCTCAGCACGTCCA +
Preference number: 6 (lower is better)
Translates to: SRSPGSGNHPRW*PGGPAARSARP
Trigger: TGGACGTGCTGAGCGAGCAGCTGGGCCCCCGGGTCACCATCGTGGATGATTTCCTGACCCCGGAGAACGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CCA 72 bp GAAGATCCCCAGGCAGCTCATGGTGGCCTCTTTCGGTaGTGGTCGCCTATGCTCCGCTGCAGAGCCGAGAGC +
Preference number: 6 (lower is better)
Translates to: EDPQAAHGGLFR*WSPMLRCRAES
Trigger: GCTCTCGGCTCTGCAGCGGAGCATAGGCGACCACCACCGAAAGAGGCCACCATGAGCTGCCTGGGGATCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452113.5
CDS CAA 72 bp GTCCCCCAAGATTTCATCCACCTTGCGGCTGAACTCTaGGGCCTTGCGCCTGCGCTCTCGGTGCACCGCGTC +
Preference number: 6 (lower is better)
Translates to: VPQDFIHLAAEL*GLAPALSVHRV
Trigger: GACGCGGTGCACCGAGAGCGCAGGCGCAAGGCCCAAGAGTTCAGCCGCAAGGTGGATGAAATCTTGGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS CAA 90 bp AGGATCTCCGCCACCCACTGCAGGGAGGTGAGCGCCGACGACGGGTaGGGTGAGTCCAGAGAATCGGAGTCACTGGCAAATGGGACGAGC +
Preference number: 6 (lower is better)
Translates to: RISATHCREVSADDG*GESRESESLANGTS
Trigger: GCTCGTCCCATTTGCCAGTGACTCCGATTCTCTGGACTCACCCAACCCGTCGTCGGCGCTCACCTCCCTGCAGTGGGTGGCGGAGATCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CAA 90 bp ACCTGCTCCTTGGCAGTTGGCTGGTCCCCCAAGATTTCATCCACCTaGCGGCTGAACTCTTGGGCCTTGCGCCTGCGCTCTCGGTGCACC +
Preference number: 6 (lower is better)
Translates to: TCSLAVGWSPKISST*RLNSWALRLRSRCT
Trigger: GGTGCACCGAGAGCGCAGGCGCAAGGCCCAAGAGTTCAGCCGCAAGGTGGATGAAATCTTGGGGGACCAGCCAACTGCCAAGGAGCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS TCA 72 bp CCACTGCAGGGAGGTGAGCGCCGACGACGGGTTGGGTaGGTCCAGAGAATCGGAGTCACTGGCAAATGGGAC +
Preference number: 6 (lower is better)
Translates to: PLQGGERRRRVG*VQRIGVTGKWD
Trigger: GTCCCATTTGCCAGTGACTCCGATTCTCTGGACTCACCCAACCCGTCGTCGGCGCTCACCTCCCTGCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS TCA 72 bp CTTCTGAGTTCTCCACCTGTTCCCACCGCAAGCGCTTaGCGCTCATGTGGCTGGTCTCACTGCGCCGGTGGC +
Preference number: 6 (lower is better)
Translates to: LLSSPPVPTASA*RSCGWSHCAGG
Trigger: GCCACCGGCGCAGTGAGACCAGCCACATGAGCGTCAAGCGCTTGCGGTGGGAACAGGTGGAGAACTCAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CCA 72 bp CTCCCAGGCAGGACAGACTCGATCCAGACAGGCCCGTaGCCGCGAAGTGTGAAGCCGAAGCTCTTGTTGCCT +
Preference number: 6 (lower is better)
Translates to: LPGRTDSIQTGP*PRSVKPKLLLP
Trigger: AGGCAACAAGAGCTTCGGCTTCACACTTCGCGGCCACGGGCCTGTCTGGATCGAGTCTGTCCTGCCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CCA 72 bp CCACCAGCGTGGGCATGGCACCACTGCCCTGCAGCATaGACACCACCTTGTCGTGGGAGCAGTTCCTCATGT +
Preference number: 6 (lower is better)
Translates to: PPAWAWHHCPAA*TPPCRGSSSSC
Trigger: ACATGAGGAACTGCTCCCACGACAAGGTGGTGTCCATGCTGCAGGGCAGTGGTGCCATGCCCACGCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CAA 72 bp GCCACCCACTGCAGGGAGGTGAGCGCCGACGACGGGTaGGGTGAGTCCAGAGAATCGGAGTCACTGGCAAAT +
Preference number: 6 (lower is better)
Translates to: ATHCREVSADDG*GESRESESLAN
Trigger: ATTTGCCAGTGACTCCGATTCTCTGGACTCACCCAACCCGTCGTCGGCGCTCACCTCCCTGCAGTGGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CAA 72 bp CCTTCTGAGTTCTCCACCTGTTCCCACCGCAAGCGCTaGACGCTCATGTGGCTGGTCTCACTGCGCCGGTGG +
Preference number: 6 (lower is better)
Translates to: PSEFSTCSHRKR*TLMWLVSLRRW
Trigger: CCACCGGCGCAGTGAGACCAGCCACATGAGCGTCAAGCGCTTGCGGTGGGAACAGGTGGAGAACTCAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS TCA 72 bp TTGGCTGGTCCCCCAAGATTTCATCCACCTTGCGGCTaGACTCTTGGGCCTTGCGCCTGCGCTCTCGGTGCA +
Preference number: 6 (lower is better)
Translates to: LAGPPRFHPPCG*TLGPCACALGA
Trigger: TGCACCGAGAGCGCAGGCGCAAGGCCCAAGAGTTCAGCCGCAAGGTGGATGAAATCTTGGGGGACCAGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS CCA 72 bp GCGAGCTTCCGACTGTTTTTGAGCTCCAGGGAGGCCTaGCGCAAGCATTCAAGGCTGCCTCGGATCTCCTCT +
Preference number: 6 (lower is better)
Translates to: ASFRLFLSSREA*RKHSRLPRISS
Trigger: AGAGGAGATCCGAGGCAGCCTTGAATGCTTGCGCCAGGCCTCCCTGGAGCTCAAAAACAGTCGGAAGCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CAA 72 bp TCCAGTCCATTGAGGAAGAGGATCCGGTCACCTGACTaGAGGGCAGCATTGTCAGCTGGGCTCCCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: SSPLRKRIRSPD*RAALSAGLPGR
Trigger: CCTGCCTGGGAGCCCAGCTGACAATGCTGCCCTCAAGTCAGGTGACCGGATCCTCTTCCTCAATGGACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CAA 72 bp CTGCTGCTGATGCAGTCGCTGGCGCTGCTCCGCTCATaGGTTACGAAGCTGCCCTGGTCATCATGGAAGCTC +
Preference number: 6 (lower is better)
Translates to: LLLMQSLALLRS*VTKLPWSSWKL
Trigger: GAGCTTCCATGATGACCAGGGCAGCTTCGTAACCAATGAGCGGAGCAGCGCCAGCGACTGCATCAGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CAA 72 bp TTGGCAGTTGGCTGGTCCCCCAAGATTTCATCCACCTaGCGGCTGAACTCTTGGGCCTTGCGCCTGCGCTCT +
Preference number: 6 (lower is better)
Translates to: LAVGWSPKISST*RLNSWALRLRS
Trigger: AGAGCGCAGGCGCAAGGCCCAAGAGTTCAGCCGCAAGGTGGATGAAATCTTGGGGGACCAGCCAACTGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS CAA 90 bp CGCTGCTCAGCTGCAAACTGCTTCAGTGCAGCGAACACCTGCTCCTaGGCAGTTGGCTGGTCCCCCAAGATTTCATCCACCTTGCGGCTG +
Preference number: 6 (lower is better)
Translates to: RCSAANCFSAANTCS*AVGWSPKISSTLRL
Trigger: CAGCCGCAAGGTGGATGAAATCTTGGGGGACCAGCCAACTGCCAAGGAGCAGGTGTTCGCTGCACTGAAGCAGTTTGCAGCTGAGCAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS CAA 90 bp TTCCTCATGTCCAGTCCATTGAGGAAGAGGATCCGGTCACCTGACTaGAGGGCAGCATTGTCAGCTGGGCTCCCAGGCAGGACAGACTCG +
Preference number: 6 (lower is better)
Translates to: FLMSSPLRKRIRSPD*RAALSAGLPGRTDS
Trigger: CGAGTCTGTCCTGCCTGGGAGCCCAGCTGACAATGCTGCCCTCAAGTCAGGTGACCGGATCCTCTTCCTCAATGGACTGGACATGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CAA 90 bp CCTTCTTCACTGCTGCTGATGCAGTCGCTGGCGCTGCTCCGCTCATaGGTTACGAAGCTGCCCTGGTCATCATGGAAGCTCATCTCCTCG +
Preference number: 6 (lower is better)
Translates to: PSSLLLMQSLALLRS*VTKLPWSSWKLISS
Trigger: CGAGGAGATGAGCTTCCATGATGACCAGGGCAGCTTCGTAACCAATGAGCGGAGCAGCGCCAGCGACTGCATCAGCAGCAGTGAAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CAA 90 bp ATGGCCAACACAAACTCCAGGATCTTGGCGAGCTTCCGACTGTTTTaGAGCTCCAGGGAGGCCTGGCGCAAGCATTCAAGGCTGCCTCGG +
Preference number: 6 (lower is better)
Translates to: MANTNSRILASFRLF*SSREAWRKHSRLPR
Trigger: CCGAGGCAGCCTTGAATGCTTGCGCCAGGCCTCCCTGGAGCTCAAAAACAGTCGGAAGCTCGCCAAGATCCTGGAGTTTGTGTTGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS TCA 72 bp CAGACTCGATCCAGACAGGCCCGTGGCCGCGAAGTGTaGAGCCGAAGCTCTTGTTGCCTTTGTAGACTCGGA +
Preference number: 6 (lower is better)
Translates to: QTRSRQARGREV*SRSSCCLCRLG
Trigger: TCCGAGTCTACAAAGGCAACAAGAGCTTCGGCTTCACACTTCGCGGCCACGGGCCTGTCTGGATCGAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS TCA 72 bp CATGTCCAGTCCATTGAGGAAGAGGATCCGGTCACCTaGCTTGAGGGCAGCATTGTCAGCTGGGCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: HVQSIEEEDPVT*LEGSIVSWAPR
Trigger: CCTGGGAGCCCAGCTGACAATGCTGCCCTCAAGTCAGGTGACCGGATCCTCTTCCTCAATGGACTGGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS TCA 72 bp AGAGCTCCTGCTCCTCATAGGTCAGCAGCTGGTAGATaGACTGCCACAGGACCTGCTTGGCAGGGGTGTCCA +
Preference number: 6 (lower is better)
Translates to: RAPAPHRSAAGR*TATGPAWQGCP
Trigger: TGGACACCCCTGCCAAGCAGGTCCTGTGGCAGTTCATCTACCAGCTGCTGACCTATGAGGAGCAGGAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS TCA 72 bp AGGAGTAGGTCAGGGAGCTGCCTTCTTCACTGCTGCTaGTGCAGTCGCTGGCGCTGCTCCGCTCATTGGTTA +
Preference number: 6 (lower is better)
Translates to: RSRSGSCLLHCC*CSRWRCSAHWL
Trigger: TAACCAATGAGCGGAGCAGCGCCAGCGACTGCATCAGCAGCAGTGAAGAAGGCAGCTCCCTGACCTACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CCA 72 bp CCCGGCACCGGTTTAGCAGGTTTCTGGGTGCCGAAGTaGAGCTCCAGGTCGAGGTATTTCACCATGTCACTC +
Preference number: 6 (lower is better)
Translates to: PGTGLAGFWVPK*SSRSRYFTMSL
Trigger: GAGTGACATGGTGAAATACCTCGACCTGGAGCTCCACTTCGGCACCCAGAAACCTGCTAAACCGGTGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CCA 72 bp CTGCTTCAGTGCAGCGAACACCTGCTCCTTGGCAGTTaGCTGGTCCCCCAAGATTTCATCCACCTTGCGGCT +
Preference number: 6 (lower is better)
Translates to: LLQCSEHLLLGS*LVPQDFIHLAA
Trigger: AGCCGCAAGGTGGATGAAATCTTGGGGGACCAGCCAACTGCCAAGGAGCAGGTGTTCGCTGCACTGAAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS CAA 72 bp ACTGCTTCAGTGCAGCGAACACCTGCTCCTTGGCAGTaGGCTGGTCCCCCAAGATTTCATCCACCTTGCGGC +
Preference number: 6 (lower is better)
Translates to: TASVQRTPAPWQ*AGPPRFHPPCG
Trigger: GCCGCAAGGTGGATGAAATCTTGGGGGACCAGCCAACTGCCAAGGAGCAGGTGTTCGCTGCACTGAAGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS TCA 72 bp TGGCAGGGGTGTCCAGCACAGGGTAGACGTCAACGATaGGGGTGTCGATGTTCCTGTGCTGGAAGAAGCTCT +
Preference number: 6 (lower is better)
Translates to: WQGCPAQGRRQR*GCRCSCAGRSS
Trigger: AGAGCTTCTTCCAGCACAGGAACATCGACACCCTCATCGTTGACGTCTACCCTGTGCTGGACACCCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS TCA 72 bp CAAACTCCAGGATCTTGGCGAGCTTCCGACTGTTTTTaGGCTCCAGGGAGGCCTGGCGCAAGCATTCAAGGC +
Preference number: 6 (lower is better)
Translates to: QTPGSWRASDCF*APGRPGASIQG
Trigger: GCCTTGAATGCTTGCGCCAGGCCTCCCTGGAGCTCAAAAACAGTCGGAAGCTCGCCAAGATCCTGGAGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS GCA 72 bp CTCCGGCTCTGTCATGGCCGTGTAGCCCAGGAAGCATaGGATTTTCTCCTGACAGAGCTCCTGCTCCTCATA +
Preference number: 6 (lower is better)
Translates to: LRLCHGRVAQEA*DFLLTELLLLI
Trigger: TATGAGGAGCAGGAGCTCTGTCAGGAGAAAATCGCATGCTTCCTGGGCTACACGGCCATGACAGAGCCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435185.5
ENST00000452113.5
CDS GCA 72 bp AGTCGCTGGCGCTGCTCCGCTCATTGGTTACGAAGCTaGCCTGGTCATCATGGAAGCTCATCTCCTCGTAGT +
Preference number: 6 (lower is better)
Translates to: SRWRCSAHWLRS*PGHHGSSSPRS
Trigger: ACTACGAGGAGATGAGCTTCCATGATGACCAGGGCAGCTTCGTAACCAATGAGCGGAGCAGCGCCAGCGACT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS GCA 72 bp CACACCAGATCATCCACCCGCTGCTCAGCTGCAAACTaGTTCAGTGCAGCGAACACCTGCTCCTTGGCAGTT +
Preference number: 6 (lower is better)
Translates to: HTRSSTRCSAAN*FSAANTCSLAV
Trigger: AACTGCCAAGGAGCAGGTGTTCGCTGCACTGAAGCAGTTTGCAGCTGAGCAGCGGGTGGATGATCTGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS GCA 72 bp GAGAGTCCACACCAGATCATCCACCCGCTGCTCAGCTaGAAACTGCTTCAGTGCAGCGAACACCTGCTCCTT +
Preference number: 6 (lower is better)
Translates to: ESPHQIIHPLLS*KLLQCSEHLLL
Trigger: AAGGAGCAGGTGTTCGCTGCACTGAAGCAGTTTGCAGCTGAGCAGCGGGTGGATGATCTGGTGTGGACTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS GCA 72 bp CGGCTCTGCTGTCATGGCCGTGTAGCCCAGGAAGCATaGGATTTTCTCCTGACAGAGCTCCTGCTCCTCATA +
Preference number: 6 (lower is better)
Translates to: RLCCHGRVAQEA*DFLLTELLLLI
Trigger: TATGAGGAGCAGGAGCTCTGTCAGGAGAAAATCGCATGCTTCCTGGGCTACACGGCCATGACAGCAGAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS CCA 72 bp TTCAGTGCAGCGAACACCTGCTCCTTGGCAGTTGGCTaGTCCCCCAAGATTTCATCCACCTTGCGGCTGAAC +
Preference number: 6 (lower is better)
Translates to: FSAANTCSLAVG*SPKISSTLRLN
Trigger: GTTCAGCCGCAAGGTGGATGAAATCTTGGGGGACCAGCCAACTGCCAAGGAGCAGGTGTTCGCTGCACTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS CAA 72 bp GCCGTCTCCAGGAAGGACGACATGACCATTGCAAACTaGTCCTCGCTAGAGGGGGAAATGCTCTGGCAGGCA +
Preference number: 6 (lower is better)
Translates to: AVSRKDDMTIAN*SSLEGEMLWQA
Trigger: TGCCTGCCAGAGCATTTCCCCCTCTAGCGAGGACAAGTTTGCAATGGTCATGTCGTCCTTCCTGGAGACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS GCA 72 bp TGCTCAGCTGCAAACTGCTTCAGTGCAGCGAACACCTaGTCCTTGGCAGTTGGCTGGTCCCCCAAGATTTCA +
Preference number: 6 (lower is better)
Translates to: CSAANCFSAANT*SLAVGWSPKIS
Trigger: TGAAATCTTGGGGGACCAGCCAACTGCCAAGGAGCAGGTGTTCGCTGCACTGAAGCAGTTTGCAGCTGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS CCA 72 bp CTGCAAACTGCTTCAGTGCAGCGAACACCTGCTCCTTaGCAGTTGGCTGGTCCCCCAAGATTTCATCCACCT +
Preference number: 6 (lower is better)
Translates to: LQTASVQRTPAP*QLAGPPRFHPP
Trigger: AGGTGGATGAAATCTTGGGGGACCAGCCAACTGCCAAGGAGCAGGTGTTCGCTGCACTGAAGCAGTTTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457091.2
CDS CAA 72 bp ACAAACTCCAGGATCTTGGCGAGCTTCCGACTGTTTTaGAGCTCCAGGGAGGCCTGGCGCAAGCATTCAAGG +
Preference number: 6 (lower is better)
Translates to: TNSRILASFRLF*SSREAWRKHSR
Trigger: CCTTGAATGCTTGCGCCAGGCCTCCCTGGAGCTCAAAAACAGTCGGAAGCTCGCCAAGATCCTGGAGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS TCA 72 bp AAGCCCGGGATTTGGACACGGTCCCCATCTTCCCTTTaGAGCTGCTGTTCAGTCGAGACTCAAGCTCTGCAT +
Preference number: 6 (lower is better)
Translates to: KPGIWTRSPSSL*SCCSVETQALH
Trigger: ATGCAGAGCTTGAGTCTCGACTGAACAGCAGCTTCAAAGGGAAGATGGGGACCGTGTCCAAATCCCGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS TCA 72 bp CCTGCAGGTCACTCAGCGCTCGCTCGAATTTGCTCATaGACTCTGCAAAGATGCCGAAGAAAGCCTCAGAGG +
Preference number: 6 (lower is better)
Translates to: PAGHSALARICS*TLQRCRRKPQR
Trigger: CCTCTGAGGCTTTCTTCGGCATCTTTGCAGAGTTCATGAGCAAATTCGAGCGAGCGCTGAGTGACCTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CCA 72 bp ATTGCAAACTTGTCCTCGCTAGAGGGGGAAATGCTCTaGCAGGCATCCTGTATCTCGCTGATAGTGCCATGG +
Preference number: 6 (lower is better)
Translates to: IANLSSLEGEML*QASCISLIVPW
Trigger: CCATGGCACTATCAGCGAGATACAGGATGCCTGCCAGAGCATTTCCCCCTCTAGCGAGGACAAGTTTGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2
CDS CAA 72 bp GTCTTGGTGGAGTTCAGCTCTGTCAGAAAGTTGATCTaGAAGCCCGTAGTCTTGTTGGTTTTGGGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: VLVEFSSVRKLI*KPVVLLVLGCP
Trigger: TGGACAGCCCAAAACCAACAAGACTACGGGCTTCAAGATCAACTTTCTGACAGAGCTGAACTCCACCAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435185.5
ENST00000452113.5
ENST00000457091.2