RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRID1 (Homo sapiens)

Ensembl gene IDs: ENSG00000182771

Ensembl transcript IDs: ENST00000327946.12, ENST00000464741.2, ENST00000552278.2

Found 615 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGGTGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTaGGAGGTGTCCAGAGCCTCTGGAAGGACGCCTCCAGGCACGGGC +
Preference number: 1 (lower is better)
Translates to: EGGQEGRRRSQMEVP*EVSRASGRTPPGTG
Trigger: GCCCGTGCCTGGAGGCGTCCTTCCAGAGGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCACCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR GCA 90 bp GCATGGAGGGCATGGTCGCCGAGCTGCTCAGCGGCAGCGGCAGGTTaGTGCTGGGCCCTGATGAGAGTGTCCGGCTGGTGCCATGGCTGC +
Preference number: 1 (lower is better)
Translates to: AWRAWSPSCSAAAAG*CWALMRVSGWCHGC
Trigger: GCAGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAGCAACCTGCCGCTGCCGCTGAGCAGCTCGGCGACCATGCCCTCCATGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR GCA 90 bp TGGAGGGCATGGTCGCCGAGCTGCTCAGCGGCAGCGGCAGGTTGCTaGTGGGCCCTGATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCT +
Preference number: 1 (lower is better)
Translates to: WRAWSPSCSAAAAGC*WALMRVSGWCHGCS
Trigger: AGAGCAGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAGCAACCTGCCGCTGCCGCTGAGCAGCTCGGCGACCATGCCCTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR GCA 90 bp AGGAGCAGGCCAATGGCCAGGATGCAGAAGACCCCGGCGAAGCTGTaGAGCTTGAGGGATTTGCCGTCGGCCTGGGCGCTGGCATGGCTG +
Preference number: 1 (lower is better)
Translates to: RSRPMARMQKTPAKL*SLRDLPSAWALAWL
Trigger: CAGCCATGCCAGCGCCCAGGCCGACGGCAAATCCCTCAAGCTGCACAGCTTCGCCGGGGTCTTCTGCATCCTGGCCATTGGCCTGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR CCA 90 bp CTGCTCTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTaGTACTCCCGTGTCGGCTCCAAGGTCTGGGTGGGAGCCAGGCCC +
Preference number: 1 (lower is better)
Translates to: LLCSGRKVLTESWVF*YSRVGSKVWVGARP
Trigger: GGGCCTGGCTCCCACCCAGACCTTGGAGCCGACACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR CCA 90 bp GGCAGGTTGCTGCTGGGCCCTGATGAGAGTGTCCGGCTGGTGCCATaGCTGCTCTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTG +
Preference number: 1 (lower is better)
Translates to: GRLLLGPDESVRLVP*LLCSGRKVLTESWV
Trigger: CACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAGCAACCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR GCA 90 bp CTGCTGGGCCCTGATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCTaGTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTAC +
Preference number: 1 (lower is better)
Translates to: LLGPDESVRLVPWLL*SGRKVLTESWVFWY
Trigger: GTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR CCA 90 bp GTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTaGGTGTTCTGGTACTCCCGTGTCGGCTCCAAGGTCTGGGTGGGA +
Preference number: 1 (lower is better)
Translates to: VPWLLCSGRKVLTES*VFWYSRVGSKVWVG
Trigger: TCCCACCCAGACCTTGGAGCCGACACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR GCA 90 bp AGTTCACTTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTaGTGTTCCACCACAACTCCAGGGCAGCCACCAGGCAGGCCAGGA +
Preference number: 1 (lower is better)
Translates to: SSLLCPPWGSPGGTG*CSTTTPGQPPGRPG
Trigger: TCCTGGCCTGCCTGGTGGCTGCCCTGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGTGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR TCA 90 bp CTCTCGGGCCCATGGGGCAGAGGCACACTGCAACACACACAGCGGTaGCTAACTCGTCCCGCAAGATCCAAGACAGGACAGGATAGCCCT +
Preference number: 1 (lower is better)
Translates to: LSGPWGRGTLQHTQR*LTRPARSKTGQDSP
Trigger: AGGGCTATCCTGTCCTGTCTTGGATCTTGCGGGACGAGTTAGTCACCGCTGTGTGTGTTGCAGTGTGCCTCTGCCCCATGGGCCCGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 90 bp CAGGCTACCCAGAACAGCCGATCACCCTACAGCACAGCAACCCAGTaGGCCAGCCCAATGCGGGCTCCAAACTCACTCTTTATCAAGCTG +
Preference number: 1 (lower is better)
Translates to: QATQNSRSPYSTATQ*ASPMRAPNSLFIKL
Trigger: CAGCTTGATAAAGAGTGAGTTTGGAGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCTGTAGGGTGATCGGCTGTTCTGGGTAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR TCA 90 bp CCATGGACCTTCTTCCAGACCAACCCCACCTCCGCCCAGTCTCCCTaGGGAAACGATGGAGTCTGCCCTCCTTCCCCCAATATTCTATCA +
Preference number: 1 (lower is better)
Translates to: PWTFFQTNPTSAQSP*GNDGVCPPSPNILS
Trigger: TGATAGAATATTGGGGGAAGGAGGGCAGACTCCATCGTTTCCTCAGGGAGACTGGGCGGAGGTGGGGTTGGTCTGGAAGAAGGTCCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR TCA 90 bp ATCTCCAGGGCCGAGAGCTCAATCGACGCTGGGGAAATCTGCTTGTaGGCAATGTCTTCATCCATGAGGCTGTTCATGCGCCGGTGGACC +
Preference number: 1 (lower is better)
Translates to: ISRAESSIDAGEICL*AMSSSMRLFMRRWT
Trigger: GGTCCACCGGCGCATGAACAGCCTCATGGATGAAGACATTGCTCACAAGCAGATTTCCCCAGCGTCGATTGAGCTCTCGGCCCTGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR GCA 90 bp CTGGAAATCTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTaGTCTGGGTTGGATTGCTGCTTGAAGAGGACTCCAGGTCTGGTC +
Preference number: 1 (lower is better)
Translates to: LEISEVIRCLSGEGP*SGLDCCLKRTPGLV
Trigger: GACCAGACCTGGAGTCCTCTTCAAGCAGCAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAGATTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 90 bp AATCTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTaGGTTGGATTGCTGCTTGAAGAGGACTCCAGGTCTGGTCTGGAG +
Preference number: 1 (lower is better)
Translates to: NLRGYQMPEWGGPLL*VGLLLEEDSRSGLE
Trigger: CTCCAGACCAGACCTGGAGTCCTCTTCAAGCAGCAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 90 bp CACAGGGATAGGCCTGGAAATCTCAGAGGTTATCAGATGCCTGAGTaGGGAGGGCCCCTGCTCTGGGTTGGATTGCTGCTTGAAGAGGAC +
Preference number: 1 (lower is better)
Translates to: HRDRPGNLRGYQMPE*GGPLLWVGLLLEED
Trigger: GTCCTCTTCAAGCAGCAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAGATTTCCAGGCCTATCCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR TCA 90 bp AAGCCTGCTCTTCCTCGGGGTCATGGTAGCCCACCTAGGCTTCTCTaGGCATGCCTGGCTCCAAGGTCCACATGCTCTGATTGGAGAAAT +
Preference number: 1 (lower is better)
Translates to: KPALPRGHGSPPRLL*ACLAPRSTCSDWRN
Trigger: ATTTCTCCAATCAGAGCATGTGGACCTTGGAGCCAGGCATGCTCAGAGAAGCCTAGGTGGGCTACCATGACCCCGAGGAAGAGCAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 90 bp CCTGGGACCATGGGTCCAAACCCAAGGGAATATTCTTCCTCTACCTaGCCTTTTGTTCCACCACCTCACCTGGTCCATGCAACTAACCCC +
Preference number: 1 (lower is better)
Translates to: PGTMGPNPREYSSST*PFVPPPHLVHATNP
Trigger: GGGGTTAGTTGCATGGACCAGGTGAGGTGGTGGAACAAAAGGCCAGGTAGAGGAAGAATATTCCCTTGGGTTTGGACCCATGGTCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR GCA 90 bp TCCAAACTCACTCTTTATCAAGCTGAGGGACTAAAAGGGACGAGGTaGCAGGAGCAAAGAAATGGGGCAGCAAGCTGTGGGACAAGGCAG +
Preference number: 1 (lower is better)
Translates to: SKLTLYQAEGLKGTR*QEQRNGAASCGTRQ
Trigger: CTGCCTTGTCCCACAGCTTGCTGCCCCATTTCTTTGCTCCTGGCACCTCGTCCCTTTTAGTCCCTCAGCTTGATAAAGAGTGAGTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR GCA 90 bp GAAGGGAGAGTTTGTGCTGGAGCCAGCCCTGTTTGTTGGACTGCCTaGAGGATTTATGACCCAGAGATAGGCCTTTACTTTTGGGGCTAC +
Preference number: 1 (lower is better)
Translates to: EGRVCAGASPVCWTA*RIYDPEIGLYFWGY
Trigger: GTAGCCCCAAAAGTAAAGGCCTATCTCTGGGTCATAAATCCTGCAGGCAGTCCAACAAACAGGGCTGGCTCCAGCACAAACTCTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 90 bp ACTCCCTGCATCTATGGCCTCACTTCCTTCTCTCACCTGGGACCATaGGTCCAAACCCAAGGGAATATTCTTCCTCTACCTGGCCTTTTG +
Preference number: 1 (lower is better)
Translates to: TPCIYGLTSFSHLGP*VQTQGNILPLPGLL
Trigger: CAAAAGGCCAGGTAGAGGAAGAATATTCCCTTGGGTTTGGACCCATGGTCCCAGGTGAGAGAAGGAAGTGAGGCCATAGATGCAGGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR TCA 90 bp TTGTGCTGGAGCCAGCCCTGTTTGTTGGACTGCCTGCAGGATTTATaGCCCAGAGATAGGCCTTTACTTTTGGGGCTACAAGCAACTTCC +
Preference number: 1 (lower is better)
Translates to: LCWSQPCLLDCLQDL*PRDRPLLLGLQATS
Trigger: GGAAGTTGCTTGTAGCCCCAAAAGTAAAGGCCTATCTCTGGGTCATAAATCCTGCAGGCAGTCCAACAAACAGGGCTGGCTCCAGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR GCA 90 bp TTTGGGGCTACAAGCAACTTCCCTGGTGGATGGGAGTTACACTTATaGTTCTCACCTAAGGCGCAAGGCAAGGCTTCCTCCTACCCAAAT +
Preference number: 1 (lower is better)
Translates to: FGATSNFPGGWELHL*FSPKAQGKASSYPN
Trigger: ATTTGGGTAGGAGGAAGCCTTGCCTTGCGCCTTAGGTGAGAAGCATAAGTGTAACTCCCATCCACCAGGGAAGTTGCTTGTAGCCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 90 bp GTAAAGGTGGAAGGGAGAGTTTGTGCTGGAGCCAGCCCTGTTTGTTaGACTGCCTGCAGGATTTATGACCCAGAGATAGGCCTTTACTTT +
Preference number: 1 (lower is better)
Translates to: VKVEGRVCAGASPVC*TACRIYDPEIGLYF
Trigger: AAAGTAAAGGCCTATCTCTGGGTCATAAATCCTGCAGGCAGTCCAACAAACAGGGCTGGCTCCAGCACAAACTCTCCCTTCCACCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 90 bp TGGACTGCCTGCAGGATTTATGACCCAGAGATAGGCCTTTACTTTTaGGGCTACAAGCAACTTCCCTGGTGGATGGGAGTTACACTTATG +
Preference number: 1 (lower is better)
Translates to: WTACRIYDPEIGLYF*GYKQLPWWMGVTLM
Trigger: CATAAGTGTAACTCCCATCCACCAGGGAAGTTGCTTGTAGCCCCAAAAGTAAAGGCCTATCTCTGGGTCATAAATCCTGCAGGCAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp CAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCACTGCATGGAGGGCATaGTCGCCGAGCTGCTCAGCG +
Preference number: 2 (lower is better)
Translates to: QEGRRRSQMEVPWEVSRATAWRA*SPSCSA
Trigger: CGCTGAGCAGCTCGGCGACCATGCCCTCCATGCAGT...GGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR GCA 90 bp CAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCACCCCGGCGAAGCTGTaGAGCTTGAGGGATTTGCCG +
Preference number: 2 (lower is better)
Translates to: QEGRRRSQMEVPWEVSRATPAKL*SLRDLP
Trigger: CGGCAAATCCCTCAAGCTGCACAGCTTCGCCGGGGT...GGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR GCA 90 bp TGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGGGCTGGTGCCATGGCTaGTCTGCTCTGGCAGAAAGG +
Preference number: 2 (lower is better)
Translates to: WAGGQAAQSDGGPVGGVQGWCHG*SALAER
Trigger: CCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCC...CTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR GCA 90 bp GTGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAAGAGTGTCCGGCTGGTaGCATGGCTGCTCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: VGRRAGGAVRWRSRGRCPRVSGW*HGCSAL
Trigger: CAGAGCAGAGCAGCCATGGCACCAGCCGGACACTCT...TGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR CAA 90 bp AGGCCAATGGCCAGGATGCAGAAGACCCCGGCGAAGCTGTGCAGCTaGAGGGATTTGCCGTCGGCCTGGGCGCTGGCATGGCTGGTGAGG +
Preference number: 2 (lower is better)
Translates to: RPMARMQKTPAKLCS*RDLPSAWALAWLVR
Trigger: CCTCACCAGCCATGCCAGCGCCCAGGCCGACGGCAAATCCCTCAAGCTGCACAGCTTCGCCGGGGTCTTCTGCATCCTGGCCATTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR CCA 90 bp GGCAGGTTGCTGCTGGGCCCTGATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCGAGAGCTGGGTGTTCTaGTACTCCCGTGTCGGCTCC +
Preference number: 2 (lower is better)
Translates to: GRLLLGPDESVRLVPWLLESWVF*YSRVGS
Trigger: GGAGCCGACACGGGAGTACCAGAACACCCAGCTCTC...GAGCAGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAGCAACCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR CCA 90 bp GGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCTCTGGAATGAGAGTGTCCGGCTaGTGCCATGGCTGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: GRRRSQMEVPWEVSRASGMRVSG*CHGCSA
Trigger: AGCAGAGCAGCCATGGCACCAGCCGGACACTCTCAT...TCCAGAGGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR CCA 90 bp CTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTACTCCCGTGTGCTCTGCTGGTCGGGTaGGTGGGAGGGTGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: LLWQKGADRELGVLVLPCALLVG*VGGWAG
Trigger: TCCTGCCCACCCTCCCACCCACCCGACCAGCAGAGC...ACACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR TCA 90 bp AGTGTCCGGCTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGACCGAGCGAAGCTGTGCAGCTTaGGGGATTTGCCGTCGGCCT +
Preference number: 2 (lower is better)
Translates to: SVRLVPWLLCSGRKVLTERSCAA*GICRRP
Trigger: AGGCCGACGGCAAATCCCTCAAGCTGCACAGCTTCG...CTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR CCA 90 bp GGCAGGTTGCTGCTGGGCCCTGATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCCTGTTCATGCGCCGGTaGACCTGCTCCAAGTTCACT +
Preference number: 2 (lower is better)
Translates to: GRLLLGPDESVRLVPWLLLFMRR*TCSKFT
Trigger: AGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAG...GAGCAGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAGCAACCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR CCA 90 bp GGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCTCTGGAGAGCTCAATCGACGCTaGGGAAATCTGCTTGTGAGC +
Preference number: 2 (lower is better)
Translates to: GRRRSQMEVPWEVSRASGELNRR*GNLLVS
Trigger: GCTCACAAGCAGATTTCCCCAGCGTCGATTGAGCTC...TCCAGAGGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR CAA 90 bp AAGTTCACTTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTaGCTGTTCCACCACAACTCCAGGGCAGCCACCAGGCAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: KFTSLSSLGVSWWHR*LFHHNSRAATRQAR
Trigger: CCTGGCCTGCCTGGTGGCTGCCCTGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGTGAACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR CCA 90 bp CTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATTGTGGGGCAGCAAGCTGTaGGACAAGGCAGCGAGTGGC +
Preference number: 2 (lower is better)
Translates to: LRGYQMPEWGGPLLWVGLWGSKL*DKAASG
Trigger: GCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCCA...CAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp CTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATTGAGCACAGCAACCCAGTaGGCCAGCCCAATGCGGGCT +
Preference number: 2 (lower is better)
Translates to: LRGYQMPEWGGPLLWVGLSTATQ*ASPMRA
Trigger: AGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCT...CAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR GCA 90 bp ATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTTCCTCGAGTGGGGAGGGCCCCTaGTCTGGGTTGGATTGCTGC +
Preference number: 2 (lower is better)
Translates to: IQGRAPNVLMENKACSSSSGEGP*SGLDCC
Trigger: GCAGCAATCCAACCCAGAGCAGGGGCCCTCCCCACT...CGAGGAAGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp CCCAGTCTCCCTGAGGAAACGATGGAGTCTGCCCTCCTTCCCCCAATATTCTATGCTCTGCTGGTCGGGTaGGTGGGAGGGTGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: PSLPEETMESALLPPIFYALLVG*VGGWAG
Trigger: TCCTGCCCACCCTCCCACCCACCCGACCAGCAGAGC...ATAGAATATTGGGGGAAGGAGGGCAGACTCCATCGTTTCCTCAGGGAGACTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CAA 90 bp GGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATaGCTGCTTGAAGAGGACTCCAGGTCTGGTCTGGAGAGGGTCGTA +
Preference number: 2 (lower is better)
Translates to: GYQMPEWGGPLLWVG*LLEEDSRSGLERVV
Trigger: TACGACCCTCTCCAGACCAGACCTGGAGTCCTCTTCAAGCAGCAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CAA 90 bp TCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTaGGATTGCTGCTTGAAGAGGACTCCAGGTCTGGTCTGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: SEVIRCLSGEGPCSG*DCCLKRTPGLVWRG
Trigger: CCCTCTCCAGACCAGACCTGGAGTCCTCTTCAAGCAGCAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp ATCCATGAGGCTGTTCATGCGCCGGTGGACCTGCTCCAAGTTCACTTCTTTGTCGATTTGCCGTCGGCCTaGGCGCTGGCATGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: IHEAVHAPVDLLQVHFFVDLPSA*ALAWLV
Trigger: CACCAGCCATGCCAGCGCCCAGGCCGACGGCAAATC...GACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTCATGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR GCA 90 bp GACTCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTAGTGGGCCAGCCCAATaGGGGCTCCAAACTCACTCT +
Preference number: 2 (lower is better)
Translates to: DSRSGLERVVKVEGRVCASGPAQ*GLQTHS
Trigger: AGAGTGAGTTTGGAGCCCGCATTGGGCTGGCCCACT...AGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR GCA 90 bp GAGGCTGTTCATGCGCCGGTGGACCTGCTCCAAGTTCACTTCTTTGTCCTCCTTCCTGGTGGCACCGGTTaGTGTTCCACCACAACTCCA +
Preference number: 2 (lower is better)
Translates to: EAVHAPVDLLQVHFFVLLPGGTG*CSTTTP
Trigger: TGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGG...AAGGAGGACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR CCA 90 bp CTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATTGAGAGGACTCCAGGTCTaGTCTGGAGAGGGTCGTAAA +
Preference number: 2 (lower is better)
Translates to: LRGYQMPEWGGPLLWVGLRGLQV*SGEGRK
Trigger: TTTACGACCCTCTCCAGACCAGACCTGGAGTCCTCT...CAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp ATCCATGAGGCTGTTCATGCGCCGGTGGACCTGCTCCAAGTTCACTTCTTTGTCTTGGGGGTCTCCTGGTaGCACCGGTTGCTGTTCCAC +
Preference number: 2 (lower is better)
Translates to: IHEAVHAPVDLLQVHFFVLGVSW*HRLLFH
Trigger: GTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAA...GACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTCATGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR CAA 90 bp CCACCCACCTGGGCACCTCCCCCAACTCTTACTAACAGAGTCCGTTaGCCTGACACCACAAAGCTTCTACTCCCTGCATCTATGGCCTCA +
Preference number: 2 (lower is better)
Translates to: PPTWAPPPTLTNRVR*PDTTKLLLPASMAS
Trigger: TGAGGCCATAGATGCAGGGAGTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAGGTGCCCAGGTGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR TCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGTCCGCCCAGTCTCCCTaGGGAAACGATGGAGTCTGC +
Preference number: 2 (lower is better)
Translates to: FCSLVASERATEGGGAVRSAQSP*GNDGVC
Trigger: GCAGACTCCATCGTTTCCTCAGGGAGACTGGGCGGA...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR GCA 90 bp CTCTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTACTCCCGTTGTATTAAAAAGCTCTaGTGGTCGGGTGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: LCSGRKVLTESWVFWYSRCIKKL*WSGGWE
Trigger: CTCCCACCCACCCGACCAGCAGAGCTTTTTAATACA...ACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR GCA 90 bp CTCCCCCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACTCTGGTCGCCCCTCCTaGCCTCAGAAAGGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: LPQLLLTESVCLTPQSFYSGRPS*PQKGPG
Trigger: TCCTGGGCCTTTCTGAGGGCAGGAGGGGCGACCAGA...GTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp TTGACCATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTCCAGGAGCAAAGAAATaGGGCAGCAAGCTGTGGGAC +
Preference number: 2 (lower is better)
Translates to: LTIQGRAPNVLMENKACSPGAKK*GSKLWD
Trigger: GTCCCACAGCTTGCTGCCCCATTTCTTTGCTCCTGG...AGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAATGGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp TTGACCATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTCTTCCTTCTCTCACCTaGGACCATGGGTCCAAACCC +
Preference number: 2 (lower is better)
Translates to: LTIQGRAPNVLMENKACSLPSLT*DHGSKP
Trigger: GGGTTTGGACCCATGGTCCCAGGTGAGAGAAGGAAG...AGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAATGGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CAA 90 bp CCATGGGTCCAAACCCAAGGGAATATTCTTCCTCTACCTGGCCTTTaGTTCCACCACCTCACCTGGTCCATGCAACTAACCCCACCTCGC +
Preference number: 2 (lower is better)
Translates to: PWVQTQGNILPLPGL*FHHLTWSMQLTPPR
Trigger: GCGAGGTGGGGTTAGTTGCATGGACCAGGTGAGGTGGTGGAACAAAAGGCCAGGTAGAGGAAGAATATTCCCTTGGGTTTGGACCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR TCA 90 bp CTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATTGCACTCTTTATCAAGCTaGGGGACTAAAAGGGACGAG +
Preference number: 2 (lower is better)
Translates to: LRGYQMPEWGGPLLWVGLHSLSS*GTKRDE
Trigger: CTCGTCCCTTTTAGTCCCTCAGCTTGATAAAGAGTG...CAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR TCA 90 bp CCCAGTCTCCCTGAGGAAACGATGGAGTCTGCCCTCCTTCCCCCAATATTCTATCAACACACACAGCGGTaGCTAACTCGTCCCGCAAGA +
Preference number: 2 (lower is better)
Translates to: PSLPEETMESALLPPIFYQHTQR*LTRPAR
Trigger: TCTTGCGGGACGAGTTAGTCACCGCTGTGTGTGTTG...ATAGAATATTGGGGGAAGGAGGGCAGACTCCATCGTTTCCTCAGGGAGACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp CACCTAAGGCGCAAGGCAAGGCTTCCTCCTACCCAAATAAACATGGTCTCTTTTGAGGGGCTCCTTATCTaGTCGCCCCTCCTGCCCTCA +
Preference number: 2 (lower is better)
Translates to: HLRRKARLPPTQINMVSFEGLLI*SPLLPS
Trigger: TGAGGGCAGGAGGGGCGACCAGATAAGGAGCCCCTC...AAAAGAGACCATGTTTATTTGGGTAGGAGGAAGCCTTGCCTTGCGCCTTAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGGCAGCGAGTGGCATGTaGGGTTCCTCGTCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: FCSLVASERATEGGGAVRAASGM*GSSSSL
Trigger: AAGGGAAGACGAGGAACCCCACATGCCACTCGCTGC...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGTCCCTGAGGAAACGATaGAGTCTGCCCTCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: FCSLVASERATEGGGAVRSLRKR*SLPSFP
Trigger: GGGGAAGGAGGGCAGACTCCATCGTTTCCTCAGGGA...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp GACTCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTTTCCACCACCTCACCTaGTCCATGCAACTAACCCCA +
Preference number: 2 (lower is better)
Translates to: DSRSGLERVVKVEGRVCAFHHLT*SMQLTP
Trigger: TGGGGTTAGTTGCATGGACCAGGTGAGGTGGTGGAA...AGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR TCA 90 bp TCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTGGACAGAGTCCGTTTGCCTaGCACCACAAAGCTTCTACT +
Preference number: 2 (lower is better)
Translates to: SRSGLERVVKVEGRVCAGQSPFA*HHKAST
Trigger: AGTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTG...TCCAGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR GCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGAAAACTGGGCTTCCCTaGAGCTGTACCTGCACAGGG +
Preference number: 2 (lower is better)
Translates to: FCSLVASERATEGGGAVRKTGLP*SCTCTG
Trigger: CCCTGTGCAGGTACAGCTGCAGGGAAGCCCAGTTTT...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATGGACAAGGCAGCGAGTaGCATGTGGGGTTCCTCGTC +
Preference number: 2 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHGQGSE*HVGFLV
Trigger: GACGAGGAACCCCACATGCCACTCGCTGCCTTGTCC...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR GCA 90 bp GACTCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTCTAACAGAGTCCGTTTaGCTGACACCACAAAGCTTC +
Preference number: 2 (lower is better)
Translates to: DSRSGLERVVKVEGRVCALTESV*LTPQSF
Trigger: GAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAG...AGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR GCA 90 bp GACTCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTCTCTATTTCTCAGCATaGCCCATCACCTGGAGTACT +
Preference number: 2 (lower is better)
Translates to: DSRSGLERVVKVEGRVCALYFSA*PITWST
Trigger: AGTACTCCAGGTGATGGGGCATGCTGAGAAATAGAG...AGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp CTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATTGGTGTGCGAGTGTGTGTaGTTTGTGTTGTTGTTTTCT +
Preference number: 2 (lower is better)
Translates to: LRGYQMPEWGGPLLWVGLVCECV*FVLLFS
Trigger: AGAAAACAACAACACAAACCACACACACTCGCACAC...CAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGAGGGAGAGTTTGTGCTaGAGCCAGCCCTGTTTGTTG +
Preference number: 2 (lower is better)
Translates to: FCSLVASERATEGGGAVRRESLC*SQPCLL
Trigger: CAACAAACAGGGCTGGCTCCAGCACAAACTCTCCCT...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR GCA 90 bp AATAGGACTTTGTATTTCTCCATGATCACAGAACCAGGCTCTCAGCTCCCTGATCACCTCGCAACTCCCTaGCCCCATGGACCTTCTTCC +
Preference number: 2 (lower is better)
Translates to: NRTLYFSMITEPGSQLPDHLATP*PHGPSS
Trigger: GGAAGAAGGTCCATGGGGGCAGGGAGTTGCGAGGTG...ATCAGGGAGCTGAGAGCCTGGTTCTGTGATCATGGAGAAATACAAAGTCCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR GCA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATGGAAGGGAGAGTTTGTaGTGGAGCCAGCCCTGTTTG +
Preference number: 2 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHGRESL*WSQPCL
Trigger: CAAACAGGGCTGGCTCCAGCACAAACTCTCCCTTCC...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp TTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAAGTGTGCGAGTGTGTGTaGTTTGTGTTGTTGTTTTCT +
Preference number: 2 (lower is better)
Translates to: FFVLLGGLLVAPVAVPPQVCECV*FVLLFS
Trigger: AGAAAACAACAACACAAACCACACACACTCGCACAC...TTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR CCA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATTCTCACCTGGGACCATaGGTCCAAACCCAAGGGAAT +
Preference number: 2 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHSHLGP*VQTQGN
Trigger: ATTCCCTTGGGTTTGGACCCATGGTCCCAGGTGAGA...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR TCA 90 bp GACTCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTGCCAACAGTATGATATaGGAACAGCTCAGTATCAAA +
Preference number: 2 (lower is better)
Translates to: DSRSGLERVVKVEGRVCAANSMI*EQLSIK
Trigger: TTTGATACTGAGCTGTTCTCATATCATACTGTTGGC...AGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR GCA 90 bp CCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACTCCCTCTAAAAGGGACGAGGTaGCAGGAGCAAAGAAATGGG +
Preference number: 2 (lower is better)
Translates to: PTLTNRVRLPDTTKLLLPLKGTR*QEQRNG
Trigger: CCCATTTCTTTGCTCCTGGCACCTCGTCCCTTTTAG...AGGGAGTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR GCA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATATGGAAAACAAAGCCTaGTCTTCCTCGGGGTCATGG +
Preference number: 2 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHMENKA*SSSGSW
Trigger: CCATGACCCCGAGGAAGAGCAGGCTTTGTTTTCCAT...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp CATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAGTGTTCCTTGGGGGTCTCCTaGTGGCACCGGTTGCTGTTC +
Preference number: 2 (lower is better)
Translates to: HMYKKNERVSVYVCVCECSLGVS*WHRLLF
Trigger: GAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGA...ACACTCGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR TCA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATAAGGTCCACATGCTCTaGTTGGAGAAATGTCAATGG +
Preference number: 2 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHKVHML*LEKCQW
Trigger: CCATTGACATTTCTCCAATCAGAGCATGTGGACCTT...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR GCA 90 bp CTTTCCTCCTTGACACTCATTCTAAGCAGAACCATCCAAGAAGACATCCAAGCTTGTATTAAAAAGCTCTaGTGGTCGGGTGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: LSSLTLILSRTIQEDIQACIKKL*WSGGWE
Trigger: CTCCCACCCACCCGACCAGCAGAGCTTTTTAATACA...AGCTTGGATGTCTTCTTGGATGGTTCTGCTTAGAATGAGTGTCAAGGAGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR GCA 90 bp AATAGGACTTTGTATTTCTCCATGATCACAGAACCAGGCTCTCAGCTCCCTGATGGAAACGATGGAGTCTaGCCTCCTTCCCCCAATATT +
Preference number: 2 (lower is better)
Translates to: NRTLYFSMITEPGSQLPDGNDGV*PPSPNI
Trigger: AATATTGGGGGAAGGAGGGCAGACTCCATCGTTTCC...ATCAGGGAGCTGAGAGCCTGGTTCTGTGATCATGGAGAAATACAAAGTCCTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGCTTCTCTCGGGCCCATaGGGCAGAGGCACACTGCAA +
Preference number: 2 (lower is better)
Translates to: LHICTRKMKESLCMCVCALLSGP*GRGTLQ
Trigger: TTGCAGTGTGCCTCTGCCCCATGGGCCCGAGAGAAG...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATATAGGCCTTTACTTTTaGGGCTACAAGCAACTTCCC +
Preference number: 2 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHIGLYF*GYKQLP
Trigger: GGGAAGTTGCTTGTAGCCCCAAAAGTAAAGGCCTAT...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp CTTTCCTCCTTGACACTCATTCTAAGCAGAACCATCCAAGAAGACATCCAAGCTCTAGGCTTAGAAAACTaGGCTTCCCTGCAGCTGTAC +
Preference number: 2 (lower is better)
Translates to: LSSLTLILSRTIQEDIQALGLEN*ASLQLY
Trigger: GTACAGCTGCAGGGAAGCCCAGTTTTCTAAGCCTAG...AGCTTGGATGTCTTCTTGGATGGTTCTGCTTAGAATGAGTGTCAAGGAGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR TCA 90 bp CCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACTCCCTACAAGGCCAACAGTATaGTATGAGAACAGCTCAGTA +
Preference number: 2 (lower is better)
Translates to: PTLTNRVRLPDTTKLLLPTRPTV*YENSSV
Trigger: TACTGAGCTGTTCTCATATCATACTGTTGGCCTTGT...AGGGAGTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR GCA 90 bp CTTTCCTCCTTGACACTCATTCTAAGCAGAACCATCCAAGAAGACATCCAAGCTAAAGCTTCTACTCCCTaGATCTATGGCCTCACTTCC +
Preference number: 2 (lower is better)
Translates to: LSSLTLILSRTIQEDIQAKASTP*IYGLTS
Trigger: GGAAGTGAGGCCATAGATGCAGGGAGTAGAAGCTTT...AGCTTGGATGTCTTCTTGGATGGTTCTGCTTAGAATGAGTGTCAAGGAGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CCA 90 bp AATAGGACTTTGTATTTCTCCATGATCACAGAACCAGGCTCTCAGCTCCCTGATAACTTCCCTGGTGGATaGGAGTTACACTTATGCTTC +
Preference number: 2 (lower is better)
Translates to: NRTLYFSMITEPGSQLPDNFPGG*ELHLCF
Trigger: GAAGCATAAGTGTAACTCCCATCCACCAGGGAAGTT...ATCAGGGAGCTGAGAGCCTGGTTCTGTGATCATGGAGAAATACAAAGTCCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR GCA 72 bp GCATGGTCGCCGAGCTGCTCAGCGGCAGCGGCAGGTTaGTGCTGGGCCCTGATGAGAGTGTCCGGCTGGTGC +
Preference number: 3 (lower is better)
Translates to: AWSPSCSAAAAG*CWALMRVSGWC
Trigger: GCACCAGCCGGACACTCTCATCAGGGCCCAGCAGCAACCTGCCGCTGCCGCTGAGCAGCTCGGCGACCATGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR GCA 72 bp TGGTCGCCGAGCTGCTCAGCGGCAGCGGCAGGTTGCTaGTGGGCCCTGATGAGAGTGTCCGGCTGGTGCCAT +
Preference number: 3 (lower is better)
Translates to: WSPSCSAAAAGC*WALMRVSGWCH
Trigger: ATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAGCAACCTGCCGCTGCCGCTGAGCAGCTCGGCGACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR CCA 72 bp CAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTaGGAGGTGTCCAGAGCCTCTGGAAGGACGCCTCCA +
Preference number: 3 (lower is better)
Translates to: QEGRRRSQMEVP*EVSRASGRTPP
Trigger: TGGAGGCGTCCTTCCAGAGGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR CAA 90 bp CAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCACTTCTTTGTCCTCCTaGGGGGTCTCCTGGTGGCAC +
Preference number: 3 (lower is better)
Translates to: QEGRRRSQMEVPWEVSRATSLSS*GVSWWH
Trigger: GTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGT...GGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR GCA 72 bp CCAATGGCCAGGATGCAGAAGACCCCGGCGAAGCTGTaGAGCTTGAGGGATTTGCCGTCGGCCTGGGCGCTG +
Preference number: 3 (lower is better)
Translates to: PMARMQKTPAKL*SLRDLPSAWAL
Trigger: CAGCGCCCAGGCCGACGGCAAATCCCTCAAGCTGCACAGCTTCGCCGGGGTCTTCTGCATCCTGGCCATTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR GCA 72 bp CTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTaGTGTTCCACCACAACTCCAGGGCAGCCACCAGGC +
Preference number: 3 (lower is better)
Translates to: LCPPWGSPGGTG*CSTTTPGQPPG
Trigger: GCCTGGTGGCTGCCCTGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR CCA 72 bp CTGCTGGGCCCTGATGAGAGTGTCCGGCTGGTGCCATaGCTGCTCTGCTCTGGCAGAAAGGTGCTGACCGAG +
Preference number: 3 (lower is better)
Translates to: LLGPDESVRLVP*LLCSGRKVLTE
Trigger: CTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR CCA 72 bp GCAGGTTGCTGCTGGGCCCTGATGAGAGTGTCCGGCTaGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGC +
Preference number: 3 (lower is better)
Translates to: AGCCWALMRVSG*CHGCSALAERC
Trigger: GCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAGCAACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR CAA 90 bp AGTGTCCGGCTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGACCGAGGCGAAGCTGTGCAGCTaGAGGGATTTGCCGTCGGCC +
Preference number: 3 (lower is better)
Translates to: SVRLVPWLLCSGRKVLTEAKLCS*RDLPSA
Trigger: GGCCGACGGCAAATCCCTCAAGCTGCACAGCTTCGC...CTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR CCA 72 bp GAGGTGCCAGGAGCAAAGAAATGGGGCAGCAAGCTGTaGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCG +
Preference number: 3 (lower is better)
Translates to: EVPGAKKWGSKL*DKAASGMWGSS
Trigger: CGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCCATTTCTTTGCTCCTGGCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 72 bp TCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTaGTACTCCCGTGTCGGCTCCAAGGTCTGGGTGGGA +
Preference number: 3 (lower is better)
Translates to: SGRKVLTESWVF*YSRVGSKVWVG
Trigger: TCCCACCCAGACCTTGGAGCCGACACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR CCA 72 bp CTGCTCTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTaGGTGTTCTGGTACTCCCGTGTCGGCTCCAAGGTC +
Preference number: 3 (lower is better)
Translates to: LLCSGRKVLTES*VFWYSRVGSKV
Trigger: GACCTTGGAGCCGACACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR TCA 72 bp TTCTTCCAGACCAACCCCACCTCCGCCCAGTCTCCCTaGGGAAACGATGGAGTCTGCCCTCCTTCCCCCAAT +
Preference number: 3 (lower is better)
Translates to: FFQTNPTSAQSP*GNDGVCPPSPN
Trigger: ATTGGGGGAAGGAGGGCAGACTCCATCGTTTCCTCAGGGAGACTGGGCGGAGGTGGGGTTGGTCTGGAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 72 bp GGGACTAAAAGGGACGAGGTGCCAGGAGCAAAGAAATaGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGC +
Preference number: 3 (lower is better)
Translates to: GTKRDEVPGAKK*GSKLWDKAASG
Trigger: GCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCCATTTCTTTGCTCCTGGCACCTCGTCCCTTTTAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR TCA 72 bp CCATGGGGCAGAGGCACACTGCAACACACACAGCGGTaGCTAACTCGTCCCGCAAGATCCAAGACAGGACAG +
Preference number: 3 (lower is better)
Translates to: PWGRGTLQHTQR*LTRPARSKTGQ
Trigger: CTGTCCTGTCTTGGATCTTGCGGGACGAGTTAGTCACCGCTGTGTGTGTTGCAGTGTGCCTCTGCCCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 72 bp CAGAACAGCCGATCACCCTACAGCACAGCAACCCAGTaGGCCAGCCCAATGCGGGCTCCAAACTCACTCTTT +
Preference number: 3 (lower is better)
Translates to: QNSRSPYSTATQ*ASPMRAPNSLF
Trigger: AAAGAGTGAGTTTGGAGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCTGTAGGGTGATCGGCTGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 72 bp GGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTaGGTTGGATTGCTGCTTGAAGAGGACTCCAGGTCT +
Preference number: 3 (lower is better)
Translates to: GYQMPEWGGPLL*VGLLLEEDSRS
Trigger: AGACCTGGAGTCCTCTTCAAGCAGCAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR GCA 72 bp TCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTaGTCTGGGTTGGATTGCTGCTTGAAGAGGACTCCA +
Preference number: 3 (lower is better)
Translates to: SEVIRCLSGEGP*SGLDCCLKRTP
Trigger: TGGAGTCCTCTTCAAGCAGCAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 72 bp CAACCCCACCTCCGCCCAGTCTCCCTGAGGAAACGATaGAGTCTGCCCTCCTTCCCCCAATATTCTATCACT +
Preference number: 3 (lower is better)
Translates to: QPHLRPVSLRKR*SLPSFPQYSIT
Trigger: AGTGATAGAATATTGGGGGAAGGAGGGCAGACTCCATCGTTTCCTCAGGGAGACTGGGCGGAGGTGGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 72 bp CTTCCTCTACCTGGCCTTTTGTTCCACCACCTCACCTaGTCCATGCAACTAACCCCACCTCGCAACTCCCTG +
Preference number: 3 (lower is better)
Translates to: LPLPGLLFHHLT*SMQLTPPRNSL
Trigger: CAGGGAGTTGCGAGGTGGGGTTAGTTGCATGGACCAGGTGAGGTGGTGGAACAAAAGGCCAGGTAGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 72 bp TCTCTATTTCTCAGCATGCCCCATCACCTGGAGTACTaGTCCACCCACCTGGGCACCTCCCCCAACTCTTAC +
Preference number: 3 (lower is better)
Translates to: SLFLSMPHHLEY*STHLGTSPNSY
Trigger: GTAAGAGTTGGGGGAGGTGCCCAGGTGGGTGGACCAGTACTCCAGGTGATGGGGCATGCTGAGAAATAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 72 bp TCCAAGTTCACTTCTTTGTCCTCCTTGGGGGTCTCCTaGTGGCACCGGTTGCTGTTCCACCACAACTCCAGG +
Preference number: 3 (lower is better)
Translates to: SKFTSLSSLGVS*WHRLLFHHNSR
Trigger: CCTGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGTGAACTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR GCA 72 bp TCTTCATCCATGAGGCTGTTCATGCGCCGGTGGACCTaGTCCAAGTTCACTTCTTTGTCCTCCTTGGGGGTC +
Preference number: 3 (lower is better)
Translates to: SSSMRLFMRRWT*SKFTSLSSLGV
Trigger: GACCCCCAAGGAGGACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTCATGGATGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR TCA 72 bp GCCGAGAGCTCAATCGACGCTGGGGAAATCTGCTTGTaGGCAATGTCTTCATCCATGAGGCTGTTCATGCGC +
Preference number: 3 (lower is better)
Translates to: AESSIDAGEICL*AMSSSMRLFMR
Trigger: GCGCATGAACAGCCTCATGGATGAAGACATTGCTCACAAGCAGATTTCCCCAGCGTCGATTGAGCTCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR-3UTR CAA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATGGTGGAAGGGAGAGTTaGTGCTGGAGCCAGCCCTGT +
Preference number: 3 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHGGRES*CWSQPC
Trigger: ACAGGGCTGGCTCCAGCACAAACTCTCCCTTCCACC...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CAA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGGGGTTGGATTGCTGCTaGAAGAGGACTCCAGGTCTG +
Preference number: 3 (lower is better)
Translates to: FCSLVASERATEGGGAVRGLDCC*KRTPGL
Trigger: CAGACCTGGAGTCCTCTTCAAGCAGCAATCCAACCC...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR GCA 72 bp ACTCTTTATCAAGCTGAGGGACTAAAAGGGACGAGGTaGCAGGAGCAAAGAAATGGGGCAGCAAGCTGTGGG +
Preference number: 3 (lower is better)
Translates to: TLYQAEGLKGTR*QEQRNGAASCG
Trigger: CCCACAGCTTGCTGCCCCATTTCTTTGCTCCTGGCACCTCGTCCCTTTTAGTCCCTCAGCTTGATAAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR GCA 72 bp GGGCACCTCCCCCAACTCTTACTAACAGAGTCCGTTTaGCTGACACCACAAAGCTTCTACTCCCTGCATCTA +
Preference number: 3 (lower is better)
Translates to: GHLPQLLLTESV*LTPQSFYSLHL
Trigger: TAGATGCAGGGAGTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAGGTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR GCA 72 bp ACAAGCAACTTCCCTGGTGGATGGGAGTTACACTTATaGTTCTCACCTAAGGCGCAAGGCAAGGCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: TSNFPGGWELHL*FSPKAQGKASS
Trigger: GGAGGAAGCCTTGCCTTGCGCCTTAGGTGAGAAGCATAAGTGTAACTCCCATCCACCAGGGAAGTTGCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 72 bp CTCCCTGCATCTATGGCCTCACTTCCTTCTCTCACCTaGGACCATGGGTCCAAACCCAAGGGAATATTCTTC +
Preference number: 3 (lower is better)
Translates to: LPASMASLPSLT*DHGSKPKGIFF
Trigger: GAAGAATATTCCCTTGGGTTTGGACCCATGGTCCCAGGTGAGAGAAGGAAGTGAGGCCATAGATGCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CAA 90 bp CTTTCCTCCTTGACACTCATTCTAAGCAGAACCATCCAAGAAGACATCCAAGCTGGCCCCTGCTCTGGGTaGGATTGCTGCTTGAAGAGG +
Preference number: 3 (lower is better)
Translates to: LSSLTLILSRTIQEDIQAGPCSG*DCCLKR
Trigger: CCTCTTCAAGCAGCAATCCAACCCAGAGCAGGGGCC...AGCTTGGATGTCTTCTTGGATGGTTCTGCTTAGAATGAGTGTCAAGGAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 72 bp ATGGGTCCAAACCCAAGGGAATATTCTTCCTCTACCTaGCCTTTTGTTCCACCACCTCACCTGGTCCATGCA +
Preference number: 3 (lower is better)
Translates to: MGPNPREYSSST*PFVPPPHLVHA
Trigger: TGCATGGACCAGGTGAGGTGGTGGAACAAAAGGCCAGGTAGAGGAAGAATATTCCCTTGGGTTTGGACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR GCA 72 bp GTTTGTGCTGGAGCCAGCCCTGTTTGTTGGACTGCCTaGAGGATTTATGACCCAGAGATAGGCCTTTACTTT +
Preference number: 3 (lower is better)
Translates to: VCAGASPVCWTA*RIYDPEIGLYF
Trigger: AAAGTAAAGGCCTATCTCTGGGTCATAAATCCTGCAGGCAGTCCAACAAACAGGGCTGGCTCCAGCACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 72 bp ATCTATGGCCTCACTTCCTTCTCTCACCTGGGACCATaGGTCCAAACCCAAGGGAATATTCTTCCTCTACCT +
Preference number: 3 (lower is better)
Translates to: IYGLTSFSHLGP*VQTQGNILPLP
Trigger: AGGTAGAGGAAGAATATTCCCTTGGGTTTGGACCCATGGTCCCAGGTGAGAGAAGGAAGTGAGGCCATAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 72 bp TGCAGGATTTATGACCCAGAGATAGGCCTTTACTTTTaGGGCTACAAGCAACTTCCCTGGTGGATGGGAGTT +
Preference number: 3 (lower is better)
Translates to: CRIYDPEIGLYF*GYKQLPWWMGV
Trigger: AACTCCCATCCACCAGGGAAGTTGCTTGTAGCCCCAAAAGTAAAGGCCTATCTCTGGGTCATAAATCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 72 bp TTTACTTTTGGGGCTACAAGCAACTTCCCTGGTGGATaGGAGTTACACTTATGCTTCTCACCTAAGGCGCAA +
Preference number: 3 (lower is better)
Translates to: FTFGATSNFPGG*ELHLCFSPKAQ
Trigger: TTGCGCCTTAGGTGAGAAGCATAAGTGTAACTCCCATCCACCAGGGAAGTTGCTTGTAGCCCCAAAAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR-3UTR CAA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATGCAATCAATAGGACTTaGTATTTCTCCATGATCACA +
Preference number: 3 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHAINRT*YFSMIT
Trigger: TGTGATCATGGAGAAATACAAAGTCCTATTGATTGC...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR TCA 72 bp AATTATAAACACTCTCTTCCCCACAGTGCTTTTAGCTaGCTGTGTGATTTGGCCGTTCTTTACTGCTCAATC +
Preference number: 3 (lower is better)
Translates to: NYKHSLPHSAFS*LCDLAVLYCSI
Trigger: GATTGAGCAGTAAAGAACGGCCAAATCACACAGTCAGCTAAAAGCACTGTGGGGAAGAGAGTGTTTATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CCA 72 bp AGAGTCTCTGTGTATGTGTGTGTGTGCGAGTGTGTGTaGTTTGTGTTGTTGTTTTCTTGTATTAAAAAGCTC +
Preference number: 3 (lower is better)
Translates to: RVSVYVCVCECV*FVLLFSCIKKL
Trigger: GAGCTTTTTAATACAAGAAAACAACAACACAAACCACACACACTCGCACACACACACATACACAGAGACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
3UTR GCA 72 bp AAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTaGGAGTGTGTGTGGTTTGTGTTGTTGTTTTCTTGT +
Preference number: 3 (lower is better)
Translates to: KKNERVSVYVCV*ECVWFVLLFSC
Trigger: ACAAGAAAACAACAACACAAACCACACACACTCGCACACACACACATACACAGAGACTCTTTCATTTTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR TCA 90 bp GGGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAACTCCAGGGCAGCCACGGGCTCCCTGTGGGCTaGGCAGCAGGATGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: GGLLVAPVAVPPQLQGSHGLPVG*AAGWRG
Trigger: GCCGCGCCATCCTGCTGCTCAGCCCACAGGGAGCCC...GTGGCTGCCCTGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp CAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCGCCTGGGCGCTGGCATaGCTGGTGAGGTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: QEGRRRSQMEVPWEVSRAAWALA*LVRSQR
Trigger: CCGCTGTGACCTCACCAGCCATGCCAGCGCCCAGGC...GGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp GTGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCATGGCACCGATGTGGATaGTGGAGTCGGCCCGCACCG +
Preference number: 4 (lower is better)
Translates to: VGRRAGGAVRWRSRGRCPWHRCG*WSRPAP
Trigger: CGGTGCGGGCCGACTCCATCATCCACATCGGTGCCA...TGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp GCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCGCTGGCATGGCTGGTaGGGTCACAGCGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: AGGQAAQSDGGPVGGVQSRWHGW*GHSGPC
Trigger: ACATGGGCCGCTGTGACCTCACCAGCCATGCCAGCG...GCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp AGCCGATCACCCTACAGCACAGCAACCCAGTGGGCCAGCCCAATGCGGGCTCCACGGCTGCGGCGGTGCTaGCAGCTTGAGCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SRSPYSTATQWASPMRAPRLRRC*QLEPRP
Trigger: CGGCCTGGGCTCAAGCTGCCAGCACCGCCGCAGCCG...TGGAGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCTGTAGGGTGATCGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp GCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCCTCACCATCGGGGCTaGGGTTCAGGTGGCATGCGG +
Preference number: 4 (lower is better)
Translates to: AGGQAAQSDGGPVGGVQSPHHRG*GSGGMR
Trigger: CCGCATGCCACCTGAACCCCAGCCCCGATGGTGAGG...GCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp TGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGGCGACCCTCCCGGGTTaGGCTGGACAAAGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: WAGGQAAQSDGGPVGGVQATLPG*AGQRGV
Trigger: CACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGC...CTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp TGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGGCAAACGTGCTGTCCTaGTCCAGGGGGTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: WAGGQAAQSDGGPVGGVQANVLS*SRGLVP
Trigger: GGGCACCAACCCCCTGGAGCAGGACAGCACGTTTGC...CTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp AGTGTCCGGCTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGACCGAGGAAGCGGGGAGGCGCTaGTCCCGGTGCAGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: SVRLVPWLLCSGRKVLTEEAGRR*SRCSPG
Trigger: CCCGGGACTGCACCGGGACCAGCGCCTCCCCGCTTC...CTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GGGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAACTCCAGGGCAGCCACGGGCTGGGGTTCAGGTaGCATGCGGTGCGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: GGLLVAPVAVPPQLQGSHGLGFR*HAVRGD
Trigger: GTCGCCACGCACCGCATGCCACCTGAACCCCAGCCC...GTGGCTGCCCTGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGATGGCGCTGTGCAGAGTaGCAGAAGCTGACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GQEGRRRSQMEVPWEVSRWRCAE*QKLTAW
Trigger: CCAGGCCGTCAGCTTCTGCCACTCTGCACAGCGCCA...TCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGACCTGCTCCAGGGGGTTaGTGCCCTTGGCTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: GQEGRRRSQMEVPWEVSRPAPGG*CPWLGS
Trigger: ACTTCCGAGCCAAGGGCACCAACCCCCTGGAGCAGG...TCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GTGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGCGGCAGGTTGCTGCTaGGCCCTGATGAGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: VGRRAGGAVRWRSRGRCPAAGCC*ALMRVS
Trigger: GGACACTCTCATCAGGGCCCAGCAGCAACCTGCCGC...TGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GTGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAACTGCATGGAGGGCATaGTCGCCGAGCTGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: VGRRAGGAVRWRSRGRCPTAWRA*SPSCSA
Trigger: CGCTGAGCAGCTCGGCGACCATGCCCTCCATGCAGT...TGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp AGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCTGGCGGCGCAGTCAGATaGAGGTCCCGTGGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: RRAGGAVRWRSRGRCPEPGGAVR*RSRGRC
Trigger: ACACCTCCCACGGGACCTCCATCTGACTGCGCCGCC...AGGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp TGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGTGTGCATGGCATCCGTaGGGGACTGCAGGGCATTGG +
Preference number: 4 (lower is better)
Translates to: WAGGQAAQSDGGPVGGVQCAWHP*GTAGHW
Trigger: CCAATGCCCTGCAGTCCCTCACGGATGCCATGCACA...CTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp GGCAGGTTGCTGCTGGGCCCTGATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCGCGGCAGCGGCAGGTTaGTGCTGGGCCCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: GRLLLGPDESVRLVPWLLAAAAG*CWALMR
Trigger: TCTCATCAGGGCCCAGCAGCAACCTGCCGCTGCCGC...GAGCAGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAGCAACCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCCTCCCGGGTTGCGCTaGACAAAGAGGTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: AGGQAAQSDGGPVGGVQSPPGLR*TKRCGM
Trigger: CATCCCACACCTCTTTGTCCAGCGCAACCCGGGAGG...GCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GGGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAACTCCAGGGCAGCCACGATTTGCCGTCGGCCTaGGCGCTGGCATGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GGLLVAPVAVPPQLQGSHDLPSA*ALAWLV
Trigger: CACCAGCCATGCCAGCGCCCAGGCCGACGGCAAATC...GTGGCTGCCCTGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp CAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCGAGAGCTGGGTGTTCTaGTACTCCCGTGTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: QEGRRRSQMEVPWEVSRAESWVF*YSRVGS
Trigger: GGAGCCGACACGGGAGTACCAGAACACCCAGCTCTC...GGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCTCTGGAGGTGTCCAGAGCCTCTaGAAGGACGCCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GRRRSQMEVPWEVSRASGGVQSL*KDASRH
Trigger: GTGCCTGGAGGCGTCCTTCCAGAGGCTCTGGACACC...TCCAGAGGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCAGATGGAGGTCCCGTaGGAGGTGTCCAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: AGGQAAQSDGGPVGGVQSQMEVP*EVSRAS
Trigger: AGAGGCTCTGGACACCTCCCACGGGACCTCCATCTG...GCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
3UTR CAA 72 bp GCCAGGATGCAGAAGACCCCGGCGAAGCTGTGCAGCTaGAGGGATTTGCCGTCGGCCTGGGCGCTGGCATGG +
Preference number: 4 (lower is better)
Translates to: ARMQKTPAKLCS*RDLPSAWALAW
Trigger: CCATGCCAGCGCCCAGGCCGACGGCAAATCCCTCAAGCTGCACAGCTTCGCCGGGGTCTTCTGCATCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp TGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGGCAGGATGTCATCGTTaGGGCTCAGGTCGGATACCG +
Preference number: 4 (lower is better)
Translates to: WAGGQAAQSDGGPVGGVQAGCHR*GSGRIP
Trigger: CGGTATCCGACCTGAGCCTCAACGATGACATCCTGC...CTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp CTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATTGGGGCTCCCTGTGGGCTaGGCAGCAGGATGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: LRGYQMPEWGGPLLWVGLGLPVG*AAGWRG
Trigger: GCCGCGCCATCCTGCTGCTCAGCCCACAGGGAGCCC...CAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp AGTGTCCGGCTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGACCGAGCAGAGTGGCAGAAGCTaGCGGCCTGGGCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SVRLVPWLLCSGRKVLTEQSGRS*RPGLGS
Trigger: GCTGCCCAGCCCAGGCCGTCAGCTTCTGCCACTCTG...CTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp TGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGCAGGGCATTGGCAGATaGACAGCCAGTGGACGTGAC +
Preference number: 4 (lower is better)
Translates to: WAGGQAAQSDGGPVGGVQQGIGR*TASGRD
Trigger: GTCACGTCCACTGGCTGTGCATCTGCCAATGCCCTG...CTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp CAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCTGCGGCCACCACTTCTaGTTCAGCACATCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: QEGRRRSQMEVPWEVSRACGHHF*FSTSRS
Trigger: GGACCTGGATGTGCTGAAGCAGAAGTGGTGGCCGCA...GGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp GGCAGGTTGCTGCTGGGCCCTGATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCGCAGCGGCAGGTTGCTaGTGGGCCCTGATGAGAGTG +
Preference number: 4 (lower is better)
Translates to: GRLLLGPDESVRLVPWLLAAAGC*WALMRV
Trigger: CACTCTCATCAGGGCCCAGCAGCAACCTGCCGCTGC...GAGCAGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAGCAACCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGGTGGCATGCGGTGCGTaGCGACCCTCCCGGGTTGCG +
Preference number: 4 (lower is better)
Translates to: DESVRLVPWLLCSGRKVLVACGA*RPSRVA
Trigger: CGCAACCCGGGAGGGTCGCCACGCACCGCATGCCAC...CAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACTCTCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp AGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCTTCCTTGGGGGTCTCCTaGTGGCACCGGTTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: RRAGGAVRWRSRGRCPEPSLGVS*WHRLLF
Trigger: GAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGA...AGGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGACTTCTTTGTCCTCCTTaGGGGTCTCCTGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: GQEGRRRSQMEVPWEVSRLLCPP*GSPGGT
Trigger: GGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAG...TCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAATGAGAGTGTCCGGCTaGTGCCATGGCTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GQEGRRRSQMEVPWEVSRMRVSG*CHGCSA
Trigger: AGCAGAGCAGCCATGGCACCAGCCGGACACTCTCAT...TCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp GGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCTCTGGAGTGTTATGGAGCTGGTaGCCGTACCTGCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: GRRRSQMEVPWEVSRASGVLWSW*PYLPSG
Trigger: CCCTGATGGCAGGTACGGTCACCAGCTCCATAACAC...TCCAGAGGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp AGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCTGCATCCGTGAGGGACTaGAGGGCATTGGCAGATGCA +
Preference number: 4 (lower is better)
Translates to: RRAGGAVRWRSRGRCPEPASVRD*RALADA
Trigger: TGCATCTGCCAATGCCCTGCAGTCCCTCACGGATGC...AGGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp CAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCATCCAGATGGCGCTGTaGAGAGTGGCAGAAGCTGAC +
Preference number: 4 (lower is better)
Translates to: QEGRRRSQMEVPWEVSRAIQMAL*RVAEAD
Trigger: GTCAGCTTCTGCCACTCTGCACAGCGCCATCTGGAT...GGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp GGGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAACTCCAGGGCAGCCACGCTCCAGGGGGTTGGTaGCCTTGGCTCGGAAGTACT +
Preference number: 4 (lower is better)
Translates to: GGLLVAPVAVPPQLQGSHAPGGW*PWLGST
Trigger: AGTACTTCCGAGCCAAGGGCACCAACCCCCTGGAGC...GTGGCTGCCCTGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp CAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCTCGGATACCGCCAACTaGAACACCCTGTCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: QEGRRRSQMEVPWEVSRASDTAN*NTLSSL
Trigger: CAAGGACGACAGGGTGTTCCAGTTGGCGGTATCCGA...GGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp CAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCTGCCTTCTGAAGGACTaGACACGCAGTTGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QEGRRRSQMEVPWEVSRACLLKD*TRSCQP
Trigger: GGGCTGACAACTGCGTGTCCAGTCCTTCAGAAGGCA...GGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp GCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCATTTCCGTATGCAGTTaGGGCTCGCCATGCTATGCC +
Preference number: 4 (lower is better)
Translates to: AGGQAAQSDGGPVGGVQSISVCS*GSPCYA
Trigger: GGCATAGCATGGCGAGCCTCAACTGCATACGGAAAT...GCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp CTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTACTCCCGTGTTCAGGTGGCATGCGGTaGGTGGCGACCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: LLWQKGADRELGVLVLPCSGGMR*VATLPG
Trigger: ACCCGGGAGGGTCGCCACGCACCGCATGCCACCTGA...ACACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp GGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCTCTGGAGCTGGTGACCGTACCTaGCATCAGGGGCTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: GRRRSQMEVPWEVSRASGAGDRT*HQGLGK
Trigger: TTTACCAAGCCCCTGATGGCAGGTACGGTCACCAGC...TCCAGAGGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp GGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTCGCAAACGTGCTGTCCTaGTCCAGGGGGTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GQQAVGQGSEWHVGFLVFANVLS*SRGLVP
Trigger: GGGCACCAACCCCCTGGAGCAGGACAGCACGTTTGC...GAAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp GGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAACTCCAGGGCAGCCACCCCTGGTGGCACCGGTTaGTGTTCCACCACAACTCCA +
Preference number: 4 (lower is better)
Translates to: GVSWWHRLLFHHNSRAATPGGTG*CSTTTP
Trigger: TGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGG...GGTGGCTGCCCTGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp GGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTCAGTGGGGAGGGCCCCTaGTCTGGGTTGGATTGCTGC +
Preference number: 4 (lower is better)
Translates to: GQQAVGQGSEWHVGFLVFSGEGP*SGLDCC
Trigger: GCAGCAATCCAACCCAGAGCAGGGGCCCTCCCCACT...GAAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATTGCCGGCGTGGCGGCTCTaGGCTGGCTGTGTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: LRGYQMPEWGGPLLWVGLPAWRL*AGCVSE
Trigger: CTCAGACACACAGCCAGCCCAGAGCCGCCACGCCGG...CAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp GGCAGGTTGCTGCTGGGCCCTGATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCGCTTCCTGCACAGCCTaGAATGGGTTGTTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GRLLLGPDESVRLVPWLLASCTA*NGLLAS
Trigger: CGAGGCCAACAACCCATTCCAGGCTGTGCAGGAAGC...GAGCAGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAGCAACCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp CAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCTTCACAAAGACCCAGTaGCTGTCCTTGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QEGRRRSQMEVPWEVSRAFTKTQ*LSLEAR
Trigger: CCTGGCTTCCAAGGACAGCCACTGGGTCTTTGTGAA...GGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GTGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCTCAATCGACGCTaGGGAAATCTGCTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: VGRRAGGAVRWRSRGRCPELNRR*GNLLVS
Trigger: GCTCACAAGCAGATTTCCCCAGCGTCGATTGAGCTC...TGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GGGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAACTCCAGGGCAGCCACGTGCTGACCGAGAGCTaGGTGTTCTGGTACTCCCGT +
Preference number: 4 (lower is better)
Translates to: GGLLVAPVAVPPQLQGSHVLTES*VFWYSR
Trigger: ACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCAC...GTGGCTGCCCTGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTACTGCATGGAGGGCATaGTCGCCGAGCTGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: GAASCGTRQRVACGVPRLTAWRA*SPSCSA
Trigger: CGCTGAGCAGCTCGGCGACCATGCCCTCCATGCAGT...AAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTCTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTACTCCCGTGCTCTGCTGGTCGGGTaGGTGGGAGGGTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LCSGRKVLTESWVFWYSRALLVG*VGGWAG
Trigger: TCCTGCCCACCCTCCCACCCACCCGACCAGCAGAGC...ACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp GGCAGGTTGCTGCTGGGCCCTGATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCAAATCCCCTGGGTCATaGGGTCACAGGCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GRLLLGPDESVRLVPWLLKSPGS*GHRLPA
Trigger: TGCAGGAAGCCTGTGACCTCATGACCCAGGGGATTT...GAGCAGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAGCAACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp CTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGCCCCTCCGTTCTTGCTaGTGGTCCGCCAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: LVPWLLCSGRKVLTESWVPLRSC*WSARVQ
Trigger: CTGAACTCTGGCGGACCATCAGCAAGAACGGAGGGG...CACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp GGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTCAGGTTATCAGATGCCTaGGTGGGGAGGGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GQQAVGQGSEWHVGFLVFRLSDA*VGRAPA
Trigger: AGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCT...GAAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGGTGATCTTCTCGCTCTaGAGGATGTCATCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: WAGGQAAQSDGGPVGGVQVIFSL*RMSSLR
Trigger: CCTCAACGATGACATCCTGCAGAGCGAGAAGATCAC...CTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp AGCCGATCACCCTACAGCACAGCAACCCAGTGGGCCAGCCCAATGCGGGCTCCACAGGGCATTGGCAGATaGACAGCCAGTGGACGTGAC +
Preference number: 4 (lower is better)
Translates to: SRSPYSTATQWASPMRAPQGIGR*TASGRD
Trigger: GTCACGTCCACTGGCTGTGCATCTGCCAATGCCCTG...TGGAGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCTGTAGGGTGATCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp AGCCGATCACCCTACAGCACAGCAACCCAGTGGGCCAGCCCAATGCGGGCTCCACCTGGTGGCACCGGTTaGTGTTCCACCACAACTCCA +
Preference number: 4 (lower is better)
Translates to: SRSPYSTATQWASPMRAPPGGTG*CSTTTP
Trigger: TGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGG...TGGAGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCTGTAGGGTGATCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp CTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGGGCTGGTGCCATGGCTaGTCTGCTCTGGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LVPWLLCSGRKVLTESWVGWCHG*SALAER
Trigger: CCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCC...CACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp GAGCAAAGAAATGGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGCGGCAGCGGCAGGTTaGTGCTGGGCCCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: EQRNGAASCGTRQRVACGAAAAG*CWALMR
Trigger: TCTCATCAGGGCCCAGCAGCAACCTGCCGCTGCCGC...CCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCCATTTCTTTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp GGCAGGTTGCTGCTGGGCCCTGATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCATTGAGGCGGACGGGTaGTCTCGAAGCCAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: GRLLLGPDESVRLVPWLLIEADG*SRSQCV
Trigger: TACACACTGGCTTCGAGACCACCCGTCCGCCTCAAT...GAGCAGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAGCAACCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGATCCTGTGAAAGGCGTTaGCCAGCATCAGAACACTGT +
Preference number: 4 (lower is better)
Translates to: GQEGRRRSQMEVPWEVSRSCERR*PASEHC
Trigger: ACAGTGTTCTGATGCTGGCCAACGCCTTTCACAGGA...TCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp TGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGGTGAGGCCAGTGATGTaGCCCTTTTTGATGGTATCC +
Preference number: 4 (lower is better)
Translates to: WAGGQAAQSDGGPVGGVQVRPVM*PFLMVS
Trigger: GGATACCATCAAAAAGGGCCACATCACTGGCCTCAC...CTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GGCAGGTTGCTGCTGGGCCCTGATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCTTAAGAGTCAATCCTTaGAGGCGGCTGCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: GRLLLGPDESVRLVPWLLLRVNP*RRLPMG
Trigger: GCCCATGGGCAGCCGCCTCCAAGGATTGACTCTTAA...GAGCAGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAGCAACCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GGGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAACTCCAGGGCAGCCACCCATCACGATGCGCATaGCCATGGAGTTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: GGLLVAPVAVPPQLQGSHPSRCA*PWSSRK
Trigger: CTTCCGTGAACTCCATGGCCATGCGCATCGTGATGG...GTGGCTGCCCTGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCCTGGAAAGTCCTTATaGGGTTGTCCATCCTGGACA +
Preference number: 4 (lower is better)
Translates to: AGGQAAQSDGGPVGGVQSPGKSL*GCPSWT
Trigger: TGTCCAGGATGGACAACCCCATAAGGACTTTCCAGG...GCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAACTCCAGGGCAGCCACCCTGTTCATGCGCCGGTaGACCTGCTCCAAGTTCACT +
Preference number: 4 (lower is better)
Translates to: GVSWWHRLLFHHNSRAATLFMRR*TCSKFT
Trigger: AGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAG...GGTGGCTGCCCTGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp AGCCGATCACCCTACAGCACAGCAACCCAGTGGGCCAGCCCAATGCGGGCTCCAGGAGGGCCCCTGCTCTaGGTTGGATTGCTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: SRSPYSTATQWASPMRAPGGPLL*VGLLLE
Trigger: TTCAAGCAGCAATCCAACCCAGAGCAGGGGCCCTCC...TGGAGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCTGTAGGGTGATCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp GGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTCCCATGTACCGCTTGCTaGAGTCCACAACGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GQQAVGQGSEWHVGFLVFPCTAC*SPQRSP
Trigger: GGGAGAGCGTTGTGGACTTCAGCAAGCGGTACATGG...GAAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp GGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTCTGGCAGAAAGGTGCTaGCCGAGAGCTGGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: GAASCGTRQRVACGVPRLLAERC*PRAGCS
Trigger: AGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAG...AAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp GGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTGGGCCCCCAACGTGCTaGTGGAAAACAAAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GAASCGTRQRVACGVPRLGPPTC*WKTKPA
Trigger: AGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCC...AAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp GGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTCGCATCCGTGAGGGACTaGAGGGCATTGGCAGATGCA +
Preference number: 4 (lower is better)
Translates to: GQQAVGQGSEWHVGFLVFASVRD*RALADA
Trigger: TGCATCTGCCAATGCCCTGCAGTCCCTCACGGATGC...GAAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp GGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAACTCCAGGGCAGCCACCGCAGACGGAAAGATTTaGCGGACCACGGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: GVSWWHRLLFHHNSRAATADGKI*RTTVIL
Trigger: AAGGATGACCGTGGTCCGGCAAATCTTTCCGTCTGC...GGTGGCTGCCCTGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp AGTGTCCGGCTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGACCGAGCCCATGGGCCTCTCTTaGAAGCTGCCATTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: SVRLVPWLLCSGRKVLTEPMGLS*KLPFKP
Trigger: GGGCTTGAATGGCAGCTTGCAAGAGAGGCCCATGGG...CTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp CTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATTGGGTCCCTGTAGGGGCTaGCATGCTGCAGGGCAATCC +
Preference number: 4 (lower is better)
Translates to: LRGYQMPEWGGPLLWVGLGPCRG*HAAGQS
Trigger: GGATTGCCCTGCAGCATGGCAGCCCCTACAGGGACC...CAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp ATGCAGAAGACCCCGGCGAAGCTGTGCAGCTTGAGGGATTTGCCGTCGGCCTGGGACCTGTGTTTGCACTaGATGGAGGGCATGGTCGCC +
Preference number: 4 (lower is better)
Translates to: MQKTPAKLCSLRDLPSAWDLCLH*MEGMVA
Trigger: GGCGACCATGCCCTCCATGCAGTGCAAACACAGGTC...CCAGGCCGACGGCAAATCCCTCAAGCTGCACAGCTTCGCCGGGGTCTTCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTACACCCTGTCGTCCTTaGCCGCGTTCTCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GAASCGTRQRVACGVPRLTPCRP*PRSPRR
Trigger: TCTTCGAGGAGAACGCGGCCAAGGACGACAGGGTGT...AAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp GGCAGGTTGCTGCTGGGCCCTGATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCCTGGACAAAGAGGTGTaGGATGTGCATGGCATCCGT +
Preference number: 4 (lower is better)
Translates to: GRLLLGPDESVRLVPWLLLDKEV*DVHGIR
Trigger: ACGGATGCCATGCACATCCCACACCTCTTTGTCCAG...GAGCAGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAGCAACCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GGCAGGTTGCTGCTGGGCCCTGATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCAGGGAGGAGATGCGGTaGTTGTTCCTCGTGCATTTC +
Preference number: 4 (lower is better)
Translates to: GRLLLGPDESVRLVPWLLREEMR*LFLVHF
Trigger: GAAATGCACGAGGAACAACCACCGCATCTCCTCCCT...GAGCAGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAGCAACCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp TTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAAGGAGGCGGCTGCCCATaGGCCTCTCTTGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: FFVLLGGLLVAPVAVPPQGGGCP*ASLASC
Trigger: GCAGCTTGCAAGAGAGGCCCATGGGCAGCCGCCTCC...TTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCATCCAGGACATCTATaGAGAACCCTTTGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: AGGQAAQSDGGPVGGVQSHPGHL*RTLCSA
Trigger: AGCGCTACAAAGGGTTCTCCATAGATGTCCTGGATG...GCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp AGCCGATCACCCTACAGCACAGCAACCCAGTGGGCCAGCCCAATGCGGGCTCCACGATGCGCATGGCCATaGAGTTCACGGAAGATTCGC +
Preference number: 4 (lower is better)
Translates to: SRSPYSTATQWASPMRAPRCAWP*SSRKIR
Trigger: GCGAATCTTCCGTGAACTCCATGGCCATGCGCATCG...TGGAGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCTGTAGGGTGATCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp AGCCGATCACCCTACAGCACAGCAACCCAGTGGGCCAGCCCAATGCGGGCTCCACCATCACGATGCGCATaGCCATGGAGTTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: SRSPYSTATQWASPMRAPPSRCA*PWSSRK
Trigger: CTTCCGTGAACTCCATGGCCATGCGCATCGTGATGG...TGGAGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCTGTAGGGTGATCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CAA 72 bp ATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATaGCTGCTTGAAGAGGACTCCAGGTCTGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: MPEWGGPLLWVG*LLEEDSRSGLE
Trigger: CTCCAGACCAGACCTGGAGTCCTCTTCAAGCAGCAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp GGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAACTCCAGGGCAGCCACCATTCAAGCCCTTCTCTaGGTCCCATGTCGCCAACTT +
Preference number: 4 (lower is better)
Translates to: GVSWWHRLLFHHNSRAATIQALL*VPCRQL
Trigger: AAGTTGGCGACATGGGACTCAGAGAAGGGCTTGAAT...GGTGGCTGCCCTGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp GATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGCTGGCAGAAAGGTGCTaGCCGAGAGCTGGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: DESVRLVPWLLCSGRKVLLAERC*PRAGCS
Trigger: AGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAG...CAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACTCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGTGGCGGCTGCGGCGGTaGTGGCAGCTTGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FCSLVASERATEGGGAVRWRLRR*WQLEPR
Trigger: CCTGGGCTCAAGCTGCCAGCACCGCCGCAGCCGCCA...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp GCCAATGGCCAGGATGCAGAAGACCCCGGCGAAGCTGTGCAGCTTGAGGGATTTATCCTTGGAGGCGGCTaGCCATGGGCCTCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: ANGQDAEDPGEAVQLEGFILGGG*PWASLA
Trigger: TGCAAGAGAGGCCCATGGGCAGCCGCCTCCAAGGAT...AAATCCCTCAAGCTGCACAGCTTCGCCGGGGTCTTCTGCATCCTGGCCATTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp GGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTCGGATGGCTGCTGCAATaGAGGCCCACACAGCGAAAT +
Preference number: 4 (lower is better)
Translates to: GQQAVGQGSEWHVGFLVFGWLLQ*RPTQRN
Trigger: ATTTCGCTGTGTGGGCCTGCATTGCAGCAGCCATCC...GAAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp CTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATTGGTCATCCGTCAGGGCTaGGTATTCCACCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: LRGYQMPEWGGPLLWVGLVIRQG*VFHHGH
Trigger: GTGGCCGTGGTGGAATACGCAGCCCTGACGGATGAC...CAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp CTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATTGACCCCGGCGAAGCTGTaGAGCTTGAGGGATTTGCCG +
Preference number: 4 (lower is better)
Translates to: LRGYQMPEWGGPLLWVGLTPAKL*SLRDLP
Trigger: CGGCAAATCCCTCAAGCTGCACAGCTTCGCCGGGGT...CAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp GAGCAAAGAAATGGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGCACCTCGCAACTCCCTaGCCCCATGGACCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: EQRNGAASCGTRQRVACGHLATP*PHGPSS
Trigger: GGAAGAAGGTCCATGGGGGCAGGGAGTTGCGAGGTG...CCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCCATTTCTTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp GAGCAAAGAAATGGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGCCTCCCGGGTTGCGCTaGACAAAGAGGTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: EQRNGAASCGTRQRVACGPPGLR*TKRCGM
Trigger: CATCCCACACCTCTTTGTCCAGCGCAACCCGGGAGG...CCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCCATTTCTTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGGTGGCATGCGGTGCGTaGCGACCCTCCCGGGTTGCG +
Preference number: 4 (lower is better)
Translates to: FCSLVASERATEGGGAVRVACGA*RPSRVA
Trigger: CGCAACCCGGGAGGGTCGCCACGCACCGCATGCCAC...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp GGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTCATTGAGGCGGACGGGTaGTCTCGAAGCCAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: GQQAVGQGSEWHVGFLVFIEADG*SRSQCV
Trigger: TACACACTGGCTTCGAGACCACCCGTCCGCCTCAAT...GAAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp AGCCGATCACCCTACAGCACAGCAACCCAGTGGGCCAGCCCAATGCGGGCTCCAAGGGAGGAGATGCGGTaGTTGTTCCTCGTGCATTTC +
Preference number: 4 (lower is better)
Translates to: SRSPYSTATQWASPMRAPREEMR*LFLVHF
Trigger: GAAATGCACGAGGAACAACCACCGCATCTCCTCCCT...TGGAGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCTGTAGGGTGATCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp TGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGACATTTCCACTTGTTTaGACAGGTCCTGGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: WAGGQAAQSDGGPVGGVQTFPLV*TGPGKS
Trigger: GGACTTTCCAGGACCTGTCCAAACAAGTGGAAATGT...CTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGTGTGTTTGCACTGCATaGAGGGCATGGTCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: DESVRLVPWLLCSGRKVLCVCTA*RAWSPS
Trigger: GCTCGGCGACCATGCCCTCCATGCAGTGCAAACACA...CAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACTCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GAGCAAAGAAATGGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGGAAGGACATGGGGATaGGGGTCTTCACCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: EQRNGAASCGTRQRVACGGRTWG*GSSPGS
Trigger: AGAGCCCGGTGAAGACCCCCATCCCCATGTCCTTCC...CCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCCATTTCTTTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp AGCCGATCACCCTACAGCACAGCAACCCAGTGGGCCAGCCCAATGCGGGCTCCAAGGGAGAGTTTGTGCTaGAGCCAGCCCTGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: SRSPYSTATQWASPMRAPRESLC*SQPCLL
Trigger: CAACAAACAGGGCTGGCTCCAGCACAAACTCTCCCT...TGGAGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCTGTAGGGTGATCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp GGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTGATTACTGCTGGCTGTaGGAGCTCCACCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GAASCGTRQRVACGVPRLDYCWL*ELHLLQ
Trigger: CTGAAGGAGGTGGAGCTCCCACAGCCAGCAGTAATC...AAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CAA 72 bp ATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTaGGATTGCTGCTTGAAGAGGACTCCAGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: IRCLSGEGPCSG*DCCLKRTPGLV
Trigger: GACCAGACCTGGAGTCCTCTTCAAGCAGCAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp GATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGAGGTCACAGGCTTCCTaGACAGCCTGGAATGGGTTG +
Preference number: 4 (lower is better)
Translates to: DESVRLVPWLLCSGRKVLRSQAS*TAWNGL
Trigger: CAACCCATTCCAGGCTGTGCAGGAAGCCTGTGACCT...CAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACTCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp TCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTGGAGCGACCCTCCCGGGTTaGGCTGGACAAAGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: SRSGLERVVKVEGRVCAGATLPG*AGQRGV
Trigger: CACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGC...TCCAGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp CAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCACTTGCGCATGTCTTTaGCAAAAGTCTCACTATAGG +
Preference number: 4 (lower is better)
Translates to: QEGRRRSQMEVPWEVSRATCACL*QKSHYR
Trigger: CCTATAGTGAGACTTTTGGCAAAGACATGCGCAAGT...GGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp ATGCAGAAGACCCCGGCGAAGCTGTGCAGCTTGAGGGATTTGCCGTCGGCCTGGCAGAGCCTTGGCCAGTaGATCCAGGACATCTATGGA +
Preference number: 4 (lower is better)
Translates to: MQKTPAKLCSLRDLPSAWQSLGQ*IQDIYG
Trigger: TCCATAGATGTCCTGGATGCACTGGCCAAGGCTCTG...CCAGGCCGACGGCAAATCCCTCAAGCTGCACAGCTTCGCCGGGGTCTTCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp ATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTTCCTCGAGGTCCCCTGTGTCCTaGAGCTCCAGGATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: IQGRAPNVLMENKACSSSRSPVS*SSRILW
Trigger: CCAGAGGATCCTGGAGCTGCAGGACACAGGGGACCT...CGAGGAAGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp AGCCGATCACCCTACAGCACAGCAACCCAGTGGGCCAGCCCAATGCGGGCTCCACTAAAAGGGACGAGGTaGCAGGAGCAAAGAAATGGG +
Preference number: 4 (lower is better)
Translates to: SRSPYSTATQWASPMRAPLKGTR*QEQRNG
Trigger: CCCATTTCTTTGCTCCTGGCACCTCGTCCCTTTTAG...TGGAGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCTGTAGGGTGATCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp GAGCAAAGAAATGGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGAGTGGGCCAGCCCAATaGGGGCTCCAAACTCACTCT +
Preference number: 4 (lower is better)
Translates to: EQRNGAASCGTRQRVACGSGPAQ*GLQTHS
Trigger: AGAGTGAGTTTGGAGCCCGCATTGGGCTGGCCCACT...CCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCCATTTCTTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTACTCCCGTGTCCCAGTGGCTGTCCTTaGAAGCCAGGTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLWQKGADRELGVLVLPCPSGCP*KPGWSP
Trigger: TGGAGACCAACCTGGCTTCCAAGGACAGCCACTGGG...ACACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp CTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGCTTCCAAGGGCACTATaGACCAGATCCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: LVPWLLCSGRKVLTESWVLPRAL*TRSRIS
Trigger: GGAGATCCTGGATCTGGTCCATAGTGCCCTTGGAAG...CACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp CAAGTTCACTTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTCAGAAGCTGACGGCCTaGGCTGGGCAGCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: QVHFFVLLGGLLVAPVAVQKLTA*AGQHSE
Trigger: CTCAGAGTGCTGCCCAGCCCAGGCCGTCAGCTTCTG...AACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGTGAACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp AGTGTCCGGCTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGACCGAGGGGGGTTGGTGCCCTTaGCTCGGAAGTACTCATATA +
Preference number: 4 (lower is better)
Translates to: SVRLVPWLLCSGRKVLTEGGWCP*LGSTHI
Trigger: TATATGAGTACTTCCGAGCCAAGGGCACCAACCCCC...CTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GAGCAAAGAAATGGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGTGTGTTTGCACTGCATaGAGGGCATGGTCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: EQRNGAASCGTRQRVACGCVCTA*RAWSPS
Trigger: GCTCGGCGACCATGCCCTCCATGCAGTGCAAACACA...CCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCCATTTCTTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp GGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTTCTCACCTGGGACCATaGGTCCAAACCCAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: GAASCGTRQRVACGVPRLSHLGP*VQTQGN
Trigger: ATTCCCTTGGGTTTGGACCCATGGTCCCAGGTGAGA...AAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp CTCCCCCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACGGCTGGCTGTGTGTCTaGGCCCCGGCGAGGAGCGAA +
Preference number: 4 (lower is better)
Translates to: LPQLLLTESVCLTPQSFYGWLCV*APARSE
Trigger: TTCGCTCCTCGCCGGGGCTCAGACACACAGCCAGCC...GTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp TTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAACACAGCCAGTGGACGTaGCCAAGGCCAAAATCCCCT +
Preference number: 4 (lower is better)
Translates to: FFVLLGGLLVAPVAVPPQHSQWT*PRPKSP
Trigger: AGGGGATTTTGGCCTTGGTCACGTCCACTGGCTGTG...TTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp GACTCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTTGTGCATGGCATCCGTaGGGGACTGCAGGGCATTGG +
Preference number: 4 (lower is better)
Translates to: DSRSGLERVVKVEGRVCACAWHP*GTAGHW
Trigger: CCAATGCCCTGCAGTCCCTCACGGATGCCATGCACA...AGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp CTCTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTACTCCCGTCGCTGTCGTAGAACATaGCGAACTTCTGCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: LCSGRKVLTESWVFWYSRRCRRT*RTSASA
Trigger: TGCGCTGGCAGAAGTTCGTCATGTTCTACGACAGCG...ACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp ATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTTCCTCGCCATCCTGGACACTGTaGGGAAGGCAGCAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: IQGRAPNVLMENKACSSSPSWTL*GRQQGW
Trigger: CCAACCTTGCTGCCTTCCTCACAGTGTCCAGGATGG...CGAGGAAGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp AGCCGATCACCCTACAGCACAGCAACCCAGTGGGCCAGCCCAATGCGGGCTCCACACTCTTTATCAAGCTaGGGGACTAAAAGGGACGAG +
Preference number: 4 (lower is better)
Translates to: SRSPYSTATQWASPMRAPHSLSS*GTKRDE
Trigger: CTCGTCCCTTTTAGTCCCTCAGCTTGATAAAGAGTG...TGGAGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCTGTAGGGTGATCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp TTGACCATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTTCCGCCCAGTCTCCCTaGGGAAACGATGGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LTIQGRAPNVLMENKACSSAQSP*GNDGVC
Trigger: GCAGACTCCATCGTTTCCTCAGGGAGACTGGGCGGA...AGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAATGGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp GCCAATGGCCAGGATGCAGAAGACCCCGGCGAAGCTGTGCAGCTTGAGGGATTTAAGAGGTGTGGGATGTaGATGGCATCCGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: ANGQDAEDPGEAVQLEGFKRCGM*MASVRD
Trigger: GTCCCTCACGGATGCCATGCACATCCCACACCTCTT...AAATCCCTCAAGCTGCACAGCTTCGCCGGGGTCTTCTGCATCCTGGCCATTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp CTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATTGAACATGACGAACTTCTaGCAGCGCAGCTCCGTCACC +
Preference number: 4 (lower is better)
Translates to: LRGYQMPEWGGPLLWVGLNMTNF*QRSSVT
Trigger: GGTGACGGAGCTGCGCTGGCAGAAGTTCGTCATGTT...CAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp AGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCTTTTCTGATTGTCCTTTaGAGACGGAAAGATTTGCCG +
Preference number: 4 (lower is better)
Translates to: RRAGGAVRWRSRGRCPEPFLIVL*RRKDLP
Trigger: CGGCAAATCTTTCCGTCTGCAAAGGACAATCAGAAA...AGGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp GGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTCCCCATGTCGCCAACTTaGGCATGTCTTTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: GQQAVGQGSEWHVGFLVFPMSPT*ACLCQK
Trigger: CTTTTGGCAAAGACATGCGCAAGTTGGCGACATGGG...GAAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp GCCAATGGCCAGGATGCAGAAGACCCCGGCGAAGCTGTGCAGCTTGAGGGATTTGGATGGCTGCTGCAATaGAGGCCCACACAGCGAAAT +
Preference number: 4 (lower is better)
Translates to: ANGQDAEDPGEAVQLEGFGWLLQ*RPTQRN
Trigger: ATTTCGCTGTGTGGGCCTGCATTGCAGCAGCCATCC...AAATCCCTCAAGCTGCACAGCTTCGCCGGGGTCTTCTGCATCCTGGCCATTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp CTCTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTACTCCCGTAGAGTTCAGCAAACGTaGTGTCCTGCTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LCSGRKVLTESWVFWYSRRVQQT*CPAPGG
Trigger: ACCCCCTGGAGCAGGACAGCACGTTTGCTGAACTCT...ACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp CAAGTTCACTTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTAGAGTGTCCGGCTGGTaGCATGGCTGCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: QVHFFVLLGGLLVAPVAVRVSGW*HGCSAL
Trigger: CAGAGCAGAGCAGCCATGGCACCAGCCGGACACTCT...AACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGTGAACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp ATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTTCCTCGGACCTGTGTTTGCACTaGATGGAGGGCATGGTCGCC +
Preference number: 4 (lower is better)
Translates to: IQGRAPNVLMENKACSSSDLCLH*MEGMVA
Trigger: GGCGACCATGCCCTCCATGCAGTGCAAACACAGGTC...CGAGGAAGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TTGACCATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTGGGGCAGAGGCACACTaGAACACACACAGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: LTIQGRAPNVLMENKACSGAEAH*NTHSGD
Trigger: GTCACCGCTGTGTGTGTTGCAGTGTGCCTCTGCCCC...AGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAATGGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp GAGCAAAGAAATGGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGAAAACTGGGCTTCCCTaGAGCTGTACCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: EQRNGAASCGTRQRVACGKTGLP*SCTCTG
Trigger: CCCTGTGCAGGTACAGCTGCAGGGAAGCCCAGTTTT...CCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCCATTTCTTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp TTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAAACACCCTGTCGTCCTTaGCCGCGTTCTCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: FFVLLGGLLVAPVAVPPQTPCRP*PRSPRR
Trigger: TCTTCGAGGAGAACGCGGCCAAGGACGACAGGGTGT...TTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGCCTCACCATCGGGGCTaGGGTTCAGGTGGCATGCGG +
Preference number: 4 (lower is better)
Translates to: FCSLVASERATEGGGAVRPHHRG*GSGGMR
Trigger: CCGCATGCCACCTGAACCCCAGCCCCGATGGTGAGG...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTACTCCCGTGTCGATGCGCATGGCCATaGAGTTCACGGAAGATTCGC +
Preference number: 4 (lower is better)
Translates to: LLWQKGADRELGVLVLPCRCAWP*SSRKIR
Trigger: GCGAATCTTCCGTGAACTCCATGGCCATGCGCATCG...ACACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GACTCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTTCCTTGGGGGTCTCCTaGTGGCACCGGTTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: DSRSGLERVVKVEGRVCASLGVS*WHRLLF
Trigger: GAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGA...AGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CAAGTTCACTTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTGGAAGGACATGGGGATaGGGGTCTTCACCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QVHFFVLLGGLLVAPVAVGRTWG*GSSPGS
Trigger: AGAGCCCGGTGAAGACCCCCATCCCCATGTCCTTCC...AACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGTGAACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGGGCGGCGCAGTCAGATaGAGGTCCCGTGGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: FCSLVASERATEGGGAVRGGAVR*RSRGRC
Trigger: ACACCTCCCACGGGACCTCCATCTGACTGCGCCGCC...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp ATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTTCCTCGGCAGCGAGTGGCATGTaGGGTTCCTCGTCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: IQGRAPNVLMENKACSSSAASGM*GSSSSL
Trigger: AAGGGAAGACGAGGAACCCCACATGCCACTCGCTGC...CGAGGAAGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp ATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTTCCTCGTCCCTGAGGAAACGATaGAGTCTGCCCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: IQGRAPNVLMENKACSSSSLRKR*SLPSFP
Trigger: GGGGAAGGAGGGCAGACTCCATCGTTTCCTCAGGGA...CGAGGAAGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp ATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTTCCTCGCTCCCTGATTACTGCTaGCTGTGGGAGCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: IQGRAPNVLMENKACSSSLPDYC*LWELHL
Trigger: GAGGTGGAGCTCCCACAGCCAGCAGTAATCAGGGAG...CGAGGAAGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp GGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTGGATCTCCGGGTCACTaGTTTCCTCATTCACAAAGA +
Preference number: 4 (lower is better)
Translates to: GAASCGTRQRVACGVPRLGSPGH*FPHSQR
Trigger: TCTTTGTGAATGAGGAAATCAGTGACCCGGAGATCC...AAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp GATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGAGAGGGAGAAGATGCTaGTTTTCTCCTCGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: DESVRLVPWLLCSGRKVLRGRRC*FSPRAS
Trigger: AGAAGCCCGAGGAGAAAATCAGCATCTTCTCCCTCT...CAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACTCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp CACCTAAGGCGCAAGGCAAGGCTTCCTCCTACCCAAATAAACATGGTCTCTTTTCAGAGTGGCAGAAGCTaGCGGCCTGGGCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: HLRRKARLPPTQINMVSFQSGRS*RPGLGS
Trigger: GCTGCCCAGCCCAGGCCGTCAGCTTCTGCCACTCTG...AAAAGAGACCATGTTTATTTGGGTAGGAGGAAGCCTTGCCTTGCGCCTTAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp GAGGCTGTTCATGCGCCGGTGGACCTGCTCCAAGTTCACTTCTTTGTCCTCCTTCCATCCTGGACACTGTaGGGAAGGCAGCAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: EAVHAPVDLLQVHFFVLLPSWTL*GRQQGW
Trigger: CCAACCTTGCTGCCTTCCTCACAGTGTCCAGGATGG...AAGGAGGACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp GCCAATGGCCAGGATGCAGAAGACCCCGGCGAAGCTGTGCAGCTTGAGGGATTTCTTCCTGATGCCTTCTaGAGGACTGGACACGCAGTT +
Preference number: 4 (lower is better)
Translates to: ANGQDAEDPGEAVQLEGFLPDAF*RTGHAV
Trigger: AACTGCGTGTCCAGTCCTTCAGAAGGCATCAGGAAG...AAATCCCTCAAGCTGCACAGCTTCGCCGGGGTCTTCTGCATCCTGGCCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp GGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTCACAGTGCTTTTAGCTaGCTGTGTGATTTGGCCGTT +
Preference number: 4 (lower is better)
Translates to: GAASCGTRQRVACGVPRLHSAFS*LCDLAV
Trigger: AACGGCCAAATCACACAGTCAGCTAAAAGCACTGTG...AAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp AGCCGATCACCCTACAGCACAGCAACCCAGTGGGCCAGCCCAATGCGGGCTCCAGCAGAATACTTCTCTTaGAGATGCTGGTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SRSPYSTATQWASPMRAPAEYFS*RCWSLS
Trigger: AGAGAGAGACCAGCATCTTCAAGAGAAGTATTCTGC...TGGAGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCTGTAGGGTGATCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TTGACCATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTCCCATGGGCCTCTCTTaGAAGCTGCCATTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LTIQGRAPNVLMENKACSPMGLS*KLPFKP
Trigger: GGGCTTGAATGGCAGCTTGCAAGAGAGGCCCATGGG...AGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAATGGTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAAAGCTGCCCATCACGATaGGCATGGCCATGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: FFVLLGGLLVAPVAVPPQSCPSR*AWPWSS
Trigger: TGAACTCCATGGCCATGCGCATCGTGATGGGCAGCT...TTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp ATCCATGAGGCTGTTCATGCGCCGGTGGACCTGCTCCAAGTTCACTTCTTTGTCACCCCGGCGAAGCTGTaGAGCTTGAGGGATTTGCCG +
Preference number: 4 (lower is better)
Translates to: IHEAVHAPVDLLQVHFFVTPAKL*SLRDLP
Trigger: CGGCAAATCCCTCAAGCTGCACAGCTTCGCCGGGGT...GACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTCATGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp AATAGGACTTTGTATTTCTCCATGATCACAGAACCAGGCTCTCAGCTCCCTGATGAAGCGGGGAGGCGCTaGTCCCGGTGCAGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: NRTLYFSMITEPGSQLPDEAGRR*SRCSPG
Trigger: CCCGGGACTGCACCGGGACCAGCGCCTCCCCGCTTC...ATCAGGGAGCTGAGAGCCTGGTTCTGTGATCATGGAGAAATACAAAGTCCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp TTGACCATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTAAGATGGCACCGATGTaGATGATGGAGTCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LTIQGRAPNVLMENKACSKMAPM*MMESAR
Trigger: GCGGGCCGACTCCATCATCCACATCGGTGCCATCTT...AGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAATGGTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp GAGCAAAGAAATGGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGAAGGCCAAAATCCCCTaGGTCATGAGGTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: EQRNGAASCGTRQRVACGKAKIP*VMRSQA
Trigger: AGCCTGTGACCTCATGACCCAGGGGATTTTGGCCTT...CCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCCATTTCTTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTCTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTACTCCCGTCATAGACAATCCAGATaGCGCTGTGCAGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LCSGRKVLTESWVFWYSRHRQSR*RCAEWQ
Trigger: CTGCCACTCTGCACAGCGCCATCTGGATTGTCTATG...ACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GACTCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTCTTCTTTGTCCTCCTTaGGGGTCTCCTGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: DSRSGLERVVKVEGRVCALLCPP*GSPGGT
Trigger: GGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAG...AGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGGGTGTCCAGAGCCTCTaGAAGGACGCCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: FCSLVASERATEGGGAVRGVQSL*KDASRH
Trigger: GTGCCTGGAGGCGTCCTTCCAGAGGCTCTGGACACC...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp ATCCATGAGGCTGTTCATGCGCCGGTGGACCTGCTCCAAGTTCACTTCTTTGTCCCATGTACCGCTTGCTaGAGTCCACAACGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: IHEAVHAPVDLLQVHFFVPCTAC*SPQRSP
Trigger: GGGAGAGCGTTGTGGACTTCAGCAAGCGGTACATGG...GACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTCATGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp TTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAACAATGTCTTCATCCATaGGGCTGTTCATGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: FFVLLGGLLVAPVAVPPQQCLHP*GCSCAG
Trigger: ACCGGCGCATGAACAGCCTCATGGATGAAGACATTG...TTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp GACTCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTGGTTGGATTGCTGCTTaGAGAGGACTCCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: DSRSGLERVVKVEGRVCAGWIAA*RGLQVW
Trigger: CCAGACCTGGAGTCCTCTTCAAGCAGCAATCCAACC...AGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp GGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTCAAGGTCCACATGCTCTaGTTGGAGAAATGTCAATGG +
Preference number: 4 (lower is better)
Translates to: GQQAVGQGSEWHVGFLVFKVHML*LEKCQW
Trigger: CCATTGACATTTCTCCAATCAGAGCATGTGGACCTT...GAAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTGGAGCTGGTGACCGTACCTaGCATCAGGGGCTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: SRSGLERVVKVEGRVCAGAGDRT*HQGLGK
Trigger: TTTACCAAGCCCCTGATGGCAGGTACGGTCACCAGC...TCCAGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTGGAAGAGTTCAGCAAACGTaGTGTCCTGCTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: SRSGLERVVKVEGRVCAGRVQQT*CPAPGG
Trigger: ACCCCCTGGAGCAGGACAGCACGTTTGCTGAACTCT...TCCAGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp GAGCAAAGAAATGGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGGAAACGATGGAGTCTaGCCTCCTTCCCCCAATATT +
Preference number: 4 (lower is better)
Translates to: EQRNGAASCGTRQRVACGGNDGV*PPSPNI
Trigger: AATATTGGGGGAAGGAGGGCAGACTCCATCGTTTCC...CCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCCATTTCTTTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp GACTCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTCTGCACAGCCTGGAATaGGTTGTTGGCCTCGATGAC +
Preference number: 4 (lower is better)
Translates to: DSRSGLERVVKVEGRVCALHSLE*VVGLDD
Trigger: GTCATCGAGGCCAACAACCCATTCCAGGCTGTGCAG...AGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATTGTCCTGTGAAAGGCGTTaGCCAGCATCAGAACACTGT +
Preference number: 4 (lower is better)
Translates to: LRGYQMPEWGGPLLWVGLSCERR*PASEHC
Trigger: ACAGTGTTCTGATGCTGGCCAACGCCTTTCACAGGA...CAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATGGAGGCGGCTGCCCATaGGCCTCTCTTGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHGGGCP*ASLASC
Trigger: GCAGCTTGCAAGAGAGGCCCATGGGCAGCCGCCTCC...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTACTCCCGTGTACCCTTTGTAGCGCTTaGGCTGTCCTAGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: LLWQKGADRELGVLVLPCTLCSA*AVLGCS
Trigger: AGAACATCCTAGGACAGCCCAAGCGCTACAAAGGGT...ACACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp CAAGTTCACTTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTAACGCTCTCCCTCTCTaGGGTGATGGTGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: QVHFFVLLGGLLVAPVAVNALPL*GDGDGR
Trigger: TCTGCCATCACCATCACCCCAGAGAGGGAGAGCGTT...AACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGTGAACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp CTCCCCCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACCAGAAGCTGACGGCCTaGGCTGGGCAGCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: LPQLLLTESVCLTPQSFYQKLTA*AGQHSE
Trigger: CTCAGAGTGCTGCCCAGCCCAGGCCGTCAGCTTCTG...GTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CACCTAAGGCGCAAGGCAAGGCTTCCTCCTACCCAAATAAACATGGTCTCTTTTGATTTGCCGTCGGCCTaGGCGCTGGCATGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: HLRRKARLPPTQINMVSFDLPSA*ALAWLV
Trigger: CACCAGCCATGCCAGCGCCCAGGCCGACGGCAAATC...AAAAGAGACCATGTTTATTTGGGTAGGAGGAAGCCTTGCCTTGCGCCTTAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CCCAGTCTCCCTGAGGAAACGATGGAGTCTGCCCTCCTTCCCCCAATATTCTATGTGCTGACCGAGAGCTaGGTGTTCTGGTACTCCCGT +
Preference number: 4 (lower is better)
Translates to: PSLPEETMESALLPPIFYVLTES*VFWYSR
Trigger: ACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCAC...ATAGAATATTGGGGGAAGGAGGGCAGACTCCATCGTTTCCTCAGGGAGACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGCAGATGGAGGTCCCGTaGGAGGTGTCCAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: FCSLVASERATEGGGAVRQMEVP*EVSRAS
Trigger: AGAGGCTCTGGACACCTCCCACGGGACCTCCATCTG...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTCCCCCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACGAGGGGCTCCTTATCTaGTCGCCCCTCCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LPQLLLTESVCLTPQSFYEGLLI*SPLLPS
Trigger: TGAGGGCAGGAGGGGCGACCAGATAAGGAGCCCCTC...GTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGGCATGCCCCATCACCTaGAGTACTGGTCCACCCACC +
Preference number: 4 (lower is better)
Translates to: FCSLVASERATEGGGAVRACPIT*STGPPT
Trigger: GGTGGGTGGACCAGTACTCCAGGTGATGGGGCATGC...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp GGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTATAGGCCTTTACTTTTaGGGCTACAAGCAACTTCCC +
Preference number: 4 (lower is better)
Translates to: GAASCGTRQRVACGVPRLIGLYF*GYKQLP
Trigger: GGGAAGTTGCTTGTAGCCCCAAAAGTAAAGGCCTAT...AAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp GAGCAAAGAAATGGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGTTCCTCGTGCATTTCTaGTTGTCCTTTGCAGACGGA +
Preference number: 4 (lower is better)
Translates to: EQRNGAASCGTRQRVACGFLVHF*LSFADG
Trigger: TCCGTCTGCAAAGGACAATCAGAAATGCACGAGGAA...CCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCCATTTCTTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp CTCTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTACTCCCGTTTCCTCGTGCATTTCTaGTTGTCCTTTGCAGACGGA +
Preference number: 4 (lower is better)
Translates to: LCSGRKVLTESWVFWYSRFLVHF*LSFADG
Trigger: TCCGTCTGCAAAGGACAATCAGAAATGCACGAGGAA...ACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp TTGACCATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTCTTCCTGATGCCTTCTaGAGGACTGGACACGCAGTT +
Preference number: 4 (lower is better)
Translates to: LTIQGRAPNVLMENKACSLPDAF*RTGHAV
Trigger: AACTGCGTGTCCAGTCCTTCAGAAGGCATCAGGAAG...AGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAATGGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp ATCCATGAGGCTGTTCATGCGCCGGTGGACCTGCTCCAAGTTCACTTCTTTGTCAACATGACGAACTTCTaGCAGCGCAGCTCCGTCACC +
Preference number: 4 (lower is better)
Translates to: IHEAVHAPVDLLQVHFFVNMTNF*QRSSVT
Trigger: GGTGACGGAGCTGCGCTGGCAGAAGTTCGTCATGTT...GACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTCATGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp TTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAACCCATGTCGCCAACTTaGGCATGTCTTTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: FFVLLGGLLVAPVAVPPQPMSPT*ACLCQK
Trigger: CTTTTGGCAAAGACATGCGCAAGTTGGCGACATGGG...TTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp CCCAGTCTCCCTGAGGAAACGATGGAGTCTGCCCTCCTTCCCCCAATATTCTATAGCTGCCCATCACGATaGGCATGGCCATGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: PSLPEETMESALLPPIFYSCPSR*AWPWSS
Trigger: TGAACTCCATGGCCATGCGCATCGTGATGGGCAGCT...ATAGAATATTGGGGGAAGGAGGGCAGACTCCATCGTTTCCTCAGGGAGACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp CTCCCCCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACGCTCCAGGGGGTTGGTaGCCTTGGCTCGGAAGTACT +
Preference number: 4 (lower is better)
Translates to: LPQLLLTESVCLTPQSFYAPGGW*PWLGST
Trigger: AGTACTTCCGAGCCAAGGGCACCAACCCCCTGGAGC...GTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TTGACCATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTATGCGCCGGTGGACCTaGTCCAAGTTCACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LTIQGRAPNVLMENKACSMRRWT*SKFTSL
Trigger: CAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCAT...AGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAATGGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp CAAGTTCACTTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTATGCGCCGGTGGACCTaGTCCAAGTTCACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: QVHFFVLLGGLLVAPVAVMRRWT*SKFTSL
Trigger: CAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCAT...AACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGTGAACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp CTCCCCCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACGGCTGGTGCCATGGCTaGTCTGCTCTGGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LPQLLLTESVCLTPQSFYGWCHG*SALAER
Trigger: CCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCC...GTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp CTCCCCCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACAGAGTGTCCGGCTGGTaGCATGGCTGCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LPQLLLTESVCLTPQSFYRVSGW*HGCSAL
Trigger: CAGAGCAGAGCAGCCATGGCACCAGCCGGACACTCT...GTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp CCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACTCCCTGCAGCGGCAGGTTGCTaGTGGGCCCTGATGAGAGTG +
Preference number: 4 (lower is better)
Translates to: PTLTNRVRLPDTTKLLLPAAAGC*WALMRV
Trigger: CACTCTCATCAGGGCCCAGCAGCAACCTGCCGCTGC...AGGGAGTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp ATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTTCCTCGTCTGGGTTGGATTGCTaGTTGAAGAGGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: IQGRAPNVLMENKACSSSSGLDC*LKRTPG
Trigger: ACCTGGAGTCCTCTTCAAGCAGCAATCCAACCCAGA...CGAGGAAGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CAAGTTCACTTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTAAGGCCAAAATCCCCTaGGTCATGAGGTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: QVHFFVLLGGLLVAPVAVKAKIP*VMRSQA
Trigger: AGCCTGTGACCTCATGACCCAGGGGATTTTGGCCTT...AACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGTGAACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GACTCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTCTGGACAAAGAGGTGTaGGATGTGCATGGCATCCGT +
Preference number: 4 (lower is better)
Translates to: DSRSGLERVVKVEGRVCALDKEV*DVHGIR
Trigger: ACGGATGCCATGCACATCCCACACCTCTTTGTCCAG...AGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp GCCAATGGCCAGGATGCAGAAGACCCCGGCGAAGCTGTGCAGCTTGAGGGATTTAGGCTGGTGAATACGTaGCTAATGTTCTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: ANGQDAEDPGEAVQLEGFRLVNT*LMFLST
Trigger: GGTGGACAAGAACATTAGCCACGTATTCACCAGCCT...AAATCCCTCAAGCTGCACAGCTTCGCCGGGGTCTTCTGCATCCTGGCCATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp GACTCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTCTTCCAAGGGCACTATaGACCAGATCCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: DSRSGLERVVKVEGRVCALPRAL*TRSRIS
Trigger: GGAGATCCTGGATCTGGTCCATAGTGCCCTTGGAAG...AGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp GATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGCATACAGATAGAGGTTaGAGATCTGCAGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: DESVRLVPWLLCSGRKVLHTDRG*RSAASG
Trigger: TCCAGATGCTGCAGATCTCCAACCTCTATCTGTATG...CAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACTCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp TCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTGGACATAGACAATCCAGATaGCGCTGTGCAGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SRSGLERVVKVEGRVCAGHRQSR*RCAEWQ
Trigger: CTGCCACTCTGCACAGCGCCATCTGGATTGTCTATG...TCCAGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp AATAGGACTTTGTATTTCTCCATGATCACAGAACCAGGCTCTCAGCTCCCTGATGCTCTGCTGGTCGGGTaGGTGGGAGGGTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: NRTLYFSMITEPGSQLPDALLVG*VGGWAG
Trigger: TCCTGCCCACCCTCCCACCCACCCGACCAGCAGAGC...ATCAGGGAGCTGAGAGCCTGGTTCTGTGATCATGGAGAAATACAAAGTCCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CACCTAAGGCGCAAGGCAAGGCTTCCTCCTACCCAAATAAACATGGTCTCTTTTAGCACAGCAACCCAGTaGGCCAGCCCAATGCGGGCT +
Preference number: 4 (lower is better)
Translates to: HLRRKARLPPTQINMVSFSTATQ*ASPMRA
Trigger: AGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCT...AAAAGAGACCATGTTTATTTGGGTAGGAGGAAGCCTTGCCTTGCGCCTTAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp TCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTGGATTCCACCACCTCACCTaGTCCATGCAACTAACCCCA +
Preference number: 4 (lower is better)
Translates to: SRSGLERVVKVEGRVCAGFHHLT*SMQLTP
Trigger: TGGGGTTAGTTGCATGGACCAGGTGAGGTGGTGGAA...TCCAGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp AATAGGACTTTGTATTTCTCCATGATCACAGAACCAGGCTCTCAGCTCCCTGATTGGCACCGATGTGGATaGTGGAGTCGGCCCGCACCG +
Preference number: 4 (lower is better)
Translates to: NRTLYFSMITEPGSQLPDWHRCG*WSRPAP
Trigger: CGGTGCGGGCCGACTCCATCATCCACATCGGTGCCA...ATCAGGGAGCTGAGAGCCTGGTTCTGTGATCATGGAGAAATACAAAGTCCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp CTCCCCCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACGCAGGATGTCATCGTTaGGGCTCAGGTCGGATACCG +
Preference number: 4 (lower is better)
Translates to: LPQLLLTESVCLTPQSFYAGCHR*GSGRIP
Trigger: CGGTATCCGACCTGAGCCTCAACGATGACATCCTGC...GTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGAAATCCCCTGGGTCATaGGGTCACAGGCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FCSLVASERATEGGGAVRKSPGS*GHRLPA
Trigger: TGCAGGAAGCCTGTGACCTCATGACCCAGGGGATTT...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp CTCCCCCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACGTGTTATGGAGCTGGTaGCCGTACCTGCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: LPQLLLTESVCLTPQSFYVLWSW*PYLPSG
Trigger: CCCTGATGGCAGGTACGGTCACCAGCTCCATAACAC...GTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp TCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTGGAAGAGGGAGAAGATGCTaGTTTTCTCCTCGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SRSGLERVVKVEGRVCAGRGRRC*FSPRAS
Trigger: AGAAGCCCGAGGAGAAAATCAGCATCTTCTCCCTCT...TCCAGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp GACTCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTGTGATCTTCTCGCTCTaGAGGATGTCATCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: DSRSGLERVVKVEGRVCAVIFSL*RMSSLR
Trigger: CCTCAACGATGACATCCTGCAGAGCGAGAAGATCAC...AGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGAGGTCACAGGCTTCCTaGACAGCCTGGAATGGGTTG +
Preference number: 4 (lower is better)
Translates to: FCSLVASERATEGGGAVRRSQAS*TAWNGL
Trigger: CAACCCATTCCAGGCTGTGCAGGAAGCCTGTGACCT...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp GAGCAAAGAAATGGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGGTGGTTGTTCCTCGTaGATTTCTGATTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: EQRNGAASCGTRQRVACGGGCSS*ISDCPL
Trigger: CAAAGGACAATCAGAAATGCACGAGGAACAACCACC...CCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCCATTTCTTTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp CTCTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTACTCCCGTGGTGGTTGTTCCTCGTaGATTTCTGATTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LCSGRKVLTESWVFWYSRGGCSS*ISDCPL
Trigger: CAAAGGACAATCAGAAATGCACGAGGAACAACCACC...ACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp CCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACTCCCTATCCTTGGAGGCGGCTaGCCATGGGCCTCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: PTLTNRVRLPDTTKLLLPILGGG*PWASLA
Trigger: TGCAAGAGAGGCCCATGGGCAGCCGCCTCCAAGGAT...AGGGAGTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp CAAGTTCACTTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTAGAGATGGCCAAGTCTaGTCTCTTGCTGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: QVHFFVLLGGLLVAPVAVRDGQV*SLADEL
Trigger: GAGCTCATCAGCAAGAGAGCAGACTTGGCCATCTCT...AACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGTGAACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR GCA 90 bp CAAGTTCACTTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTTGTATTAAAAAGCTCTaGTGGTCGGGTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: QVHFFVLLGGLLVAPVAVCIKKL*WSGGWE
Trigger: CTCCCACCCACCCGACCAGCAGAGCTTTTTAATACA...AACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGTGAACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp CCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACTCCCTCGCACCGACACGCACTaGCATATCCAGGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PTLTNRVRLPDTTKLLLPRTDTH*HIQGRS
Trigger: GCTTCTCCCCTGGATATGCCAGTGCGTGTCGGTGCG...AGGGAGTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp TTGACCATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTACCCTTTGTAGCGCTTaGGCTGTCCTAGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: LTIQGRAPNVLMENKACSTLCSA*AVLGCS
Trigger: AGAACATCCTAGGACAGCCCAAGCGCTACAAAGGGT...AGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAATGGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CCCAGTCTCCCTGAGGAAACGATGGAGTCTGCCCTCCTTCCCCCAATATTCTATGGGGGTTGGTGCCCTTaGCTCGGAAGTACTCATATA +
Preference number: 4 (lower is better)
Translates to: PSLPEETMESALLPPIFYGGWCP*LGSTHI
Trigger: TATATGAGTACTTCCGAGCCAAGGGCACCAACCCCC...ATAGAATATTGGGGGAAGGAGGGCAGACTCCATCGTTTCCTCAGGGAGACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATTTGGGGGTCTCCTGGTaGCACCGGTTGCTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHLGVSW*HRLLFH
Trigger: GTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAA...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CCCAGTCTCCCTGAGGAAACGATGGAGTCTGCCCTCCTTCCCCCAATATTCTATGAGCTCAATCGACGCTaGGGAAATCTGCTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PSLPEETMESALLPPIFYELNRR*GNLLVS
Trigger: GCTCACAAGCAGATTTCCCCAGCGTCGATTGAGCTC...ATAGAATATTGGGGGAAGGAGGGCAGACTCCATCGTTTCCTCAGGGAGACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CACCTAAGGCGCAAGGCAAGGCTTCCTCCTACCCAAATAAACATGGTCTCTTTTGAGAGCTGGGTGTTCTaGTACTCCCGTGTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: HLRRKARLPPTQINMVSFESWVF*YSRVGS
Trigger: GGAGCCGACACGGGAGTACCAGAACACCCAGCTCTC...AAAAGAGACCATGTTTATTTGGGTAGGAGGAAGCCTTGCCTTGCGCCTTAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACTCCCTGGACAAGGCAGCGAGTaGCATGTGGGGTTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: PTLTNRVRLPDTTKLLLPGQGSE*HVGFLV
Trigger: GACGAGGAACCCCACATGCCACTCGCTGCCTTGTCC...AGGGAGTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGCTTCCTTCTCTCACCTaGGACCATGGGTCCAAACCC +
Preference number: 4 (lower is better)
Translates to: FCSLVASERATEGGGAVRLPSLT*DHGSKP
Trigger: GGGTTTGGACCCATGGTCCCAGGTGAGAGAAGGAAG...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATCATCACCTGGAGTACTaGTCCACCCACCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHHHLEY*STHLGT
Trigger: GGTGCCCAGGTGGGTGGACCAGTACTCCAGGTGATG...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATTGAAGCAACTTCCCTGGTaGATGGGAGTTACACTTATG +
Preference number: 4 (lower is better)
Translates to: LRGYQMPEWGGPLLWVGLKQLPW*MGVTLM
Trigger: CATAAGTGTAACTCCCATCCACCAGGGAAGTTGCTT...CAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATCACAGCCAGTGGACGTaGCCAAGGCCAAAATCCCCT +
Preference number: 4 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHHSQWT*PRPKSP
Trigger: AGGGGATTTTGGCCTTGGTCACGTCCACTGGCTGTG...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp GAGGCTGTTCATGCGCCGGTGGACCTGCTCCAAGTTCACTTCTTTGTCCTCCTTGGATCTCCGGGTCACTaGTTTCCTCATTCACAAAGA +
Preference number: 4 (lower is better)
Translates to: EAVHAPVDLLQVHFFVLLGSPGH*FPHSQR
Trigger: TCTTTGTGAATGAGGAAATCAGTGACCCGGAGATCC...AAGGAGGACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp TTGACCATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTGGGGAAATCTGCTTGTaGGCAATGTCTTCATCCATG +
Preference number: 4 (lower is better)
Translates to: LTIQGRAPNVLMENKACSGEICL*AMSSSM
Trigger: CATGGATGAAGACATTGCTCACAAGCAGATTTCCCC...AGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAATGGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp CAAGTTCACTTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTGGGGAAATCTGCTTGTaGGCAATGTCTTCATCCATG +
Preference number: 4 (lower is better)
Translates to: QVHFFVLLGGLLVAPVAVGEICL*AMSSSM
Trigger: CATGGATGAAGACATTGCTCACAAGCAGATTTCCCC...AACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGTGAACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR TCA 90 bp CTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATTGACAAGGCCAACAGTATaGTATGAGAACAGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: LRGYQMPEWGGPLLWVGLTRPTV*YENSSV
Trigger: TACTGAGCTGTTCTCATATCATACTGTTGGCCTTGT...CAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp CTCCCCCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACAAGAGGTGTGGGATGTaGATGGCATCCGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: LPQLLLTESVCLTPQSFYKRCGM*MASVRD
Trigger: GTCCCTCACGGATGCCATGCACATCCCACACCTCTT...GTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGCAGAGCCTTGGCCAGTaGATCCAGGACATCTATGGA +
Preference number: 4 (lower is better)
Translates to: FCSLVASERATEGGGAVRQSLGQ*IQDIYG
Trigger: TCCATAGATGTCCTGGATGCACTGGCCAAGGCTCTG...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTGGAAAAGCTTCTACTCCCTaGATCTATGGCCTCACTTCC +
Preference number: 4 (lower is better)
Translates to: SRSGLERVVKVEGRVCAGKASTP*IYGLTS
Trigger: GGAAGTGAGGCCATAGATGCAGGGAGTAGAAGCTTT...TCCAGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp GACTCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTGCTCCAAGGTCCACATaGTCTGATTGGAGAAATGTC +
Preference number: 4 (lower is better)
Translates to: DSRSGLERVVKVEGRVCAAPRST*SDWRNV
Trigger: GACATTTCTCCAATCAGAGCATGTGGACCTTGGAGC...AGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CAAGTTCACTTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTCCTCCCACCATTCCATaGCTTAGTGGATTTCCGTAT +
Preference number: 4 (lower is better)
Translates to: QVHFFVLLGGLLVAPVAVPPTIP*LSGFPY
Trigger: ATACGGAAATCCACTAAGCCATGGAATGGTGGGAGG...AACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGTGAACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp CTCCCCCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACTTAAGAGTCAATCCTTaGAGGCGGCTGCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: LPQLLLTESVCLTPQSFYLRVNP*RRLPMG
Trigger: GCCCATGGGCAGCCGCCTCCAAGGATTGACTCTTAA...GTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp GACTCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTCATCCAGGACATCTATaGAGAACCCTTTGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: DSRSGLERVVKVEGRVCAHPGHL*RTLCSA
Trigger: AGCGCTACAAAGGGTTCTCCATAGATGTCCTGGATG...AGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTTTCCTCCTTGACACTCATTCTAAGCAGAACCATCCAAGAAGACATCCAAGCTTGGCGCTGTGCAGAGTaGCAGAAGCTGACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LSSLTLILSRTIQEDIQAWRCAE*QKLTAW
Trigger: CCAGGCCGTCAGCTTCTGCCACTCTGCACAGCGCCA...AGCTTGGATGTCTTCTTGGATGGTTCTGCTTAGAATGAGTGTCAAGGAGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATATGAGAGTGTCCGGCTaGTGCCATGGCTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHMRVSG*CHGCSA
Trigger: AGCAGAGCAGCCATGGCACCAGCCGGACACTCTCAT...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp ATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTTCCTCGAACTTCCCTGGTGGATaGGAGTTACACTTATGCTTC +
Preference number: 4 (lower is better)
Translates to: IQGRAPNVLMENKACSSSNFPGG*ELHLCF
Trigger: GAAGCATAAGTGTAACTCCCATCCACCAGGGAAGTT...CGAGGAAGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp CTCCCCCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACATTTCCGTATGCAGTTaGGGCTCGCCATGCTATGCC +
Preference number: 4 (lower is better)
Translates to: LPQLLLTESVCLTPQSFYISVCS*GSPCYA
Trigger: GGCATAGCATGGCGAGCCTCAACTGCATACGGAAAT...GTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp CTCCCCCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACCAATGTCTTCATCCATaGGGCTGTTCATGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: LPQLLLTESVCLTPQSFYQCLHP*GCSCAG
Trigger: ACCGGCGCATGAACAGCCTCATGGATGAAGACATTG...GTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATCAACACACACAGCGGTaGCTAACTCGTCCCGCAAGA +
Preference number: 4 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHQHTQR*LTRPAR
Trigger: TCTTGCGGGACGAGTTAGTCACCGCTGTGTGTGTTG...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp CACCTAAGGCGCAAGGCAAGGCTTCCTCCTACCCAAATAAACATGGTCTCTTTTATCCAGATGGCGCTGTaGAGAGTGGCAGAAGCTGAC +
Preference number: 4 (lower is better)
Translates to: HLRRKARLPPTQINMVSFIQMAL*RVAEAD
Trigger: GTCAGCTTCTGCCACTCTGCACAGCGCCATCTGGAT...AAAAGAGACCATGTTTATTTGGGTAGGAGGAAGCCTTGCCTTGCGCCTTAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTGGATTGGCCGTTCTTTACTaGTCAATCATGTCACTAGGG +
Preference number: 4 (lower is better)
Translates to: SRSGLERVVKVEGRVCAGLAVLY*SIMSLG
Trigger: CCCTAGTGACATGATTGAGCAGTAAAGAACGGCCAA...TCCAGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CCCAGTCTCCCTGAGGAAACGATGGAGTCTGCCCTCCTTCCCCCAATATTCTATAGGCTGGTGAATACGTaGCTAATGTTCTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: PSLPEETMESALLPPIFYRLVNT*LMFLST
Trigger: GGTGGACAAGAACATTAGCCACGTATTCACCAGCCT...ATAGAATATTGGGGGAAGGAGGGCAGACTCCATCGTTTCCTCAGGGAGACTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CACCTAAGGCGCAAGGCAAGGCTTCCTCCTACCCAAATAAACATGGTCTCTTTTAACGCTCTCCCTCTCTaGGGTGATGGTGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: HLRRKARLPPTQINMVSFNALPL*GDGDGR
Trigger: TCTGCCATCACCATCACCCCAGAGAGGGAGAGCGTT...AAAAGAGACCATGTTTATTTGGGTAGGAGGAAGCCTTGCCTTGCGCCTTAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CACCTAAGGCGCAAGGCAAGGCTTCCTCCTACCCAAATAAACATGGTCTCTTTTTGCCTTCTGAAGGACTaGACACGCAGTTGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: HLRRKARLPPTQINMVSFCLLKD*TRSCQP
Trigger: GGGCTGACAACTGCGTGTCCAGTCCTTCAGAAGGCA...AAAAGAGACCATGTTTATTTGGGTAGGAGGAAGCCTTGCCTTGCGCCTTAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAGTGTGCCTGGGCGCTGGCATaGCTGGTGAGGTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: HMYKKNERVSVYVCVCECAWALA*LVRSQR
Trigger: CCGCTGTGACCTCACCAGCCATGCCAGCGCCCAGGC...ACACTCGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CCA 90 bp CACCTAAGGCGCAAGGCAAGGCTTCCTCCTACCCAAATAAACATGGTCTCTTTTCTGTTCATGCGCCGGTaGACCTGCTCCAAGTTCACT +
Preference number: 4 (lower is better)
Translates to: HLRRKARLPPTQINMVSFLFMRR*TCSKFT
Trigger: AGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAG...AAAAGAGACCATGTTTATTTGGGTAGGAGGAAGCCTTGCCTTGCGCCTTAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGTCAGGTGGCATGCGGTaGGTGGCGACCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: LHICTRKMKESLCMCVCASGGMR*VATLPG
Trigger: ACCCGGGAGGGTCGCCACGCACCGCATGCCACCTGA...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR GCA 90 bp CTCCCCCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACAGAGATGGCCAAGTCTaGTCTCTTGCTGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: LPQLLLTESVCLTPQSFYRDGQV*SLADEL
Trigger: GAGCTCATCAGCAAGAGAGCAGACTTGGCCATCTCT...GTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp CTTTCCTCCTTGACACTCATTCTAAGCAGAACCATCCAAGAAGACATCCAAGCTTGCGGCCACCACTTCTaGTTCAGCACATCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LSSLTLILSRTIQEDIQACGHHF*FSTSRS
Trigger: GGACCTGGATGTGCTGAAGCAGAAGTGGTGGCCGCA...AGCTTGGATGTCTTCTTGGATGGTTCTGCTTAGAATGAGTGTCAAGGAGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGGCATGGTCGCCGAGCTaGTCAGCGGCAGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LHICTRKMKESLCMCVCAAWSPS*SAAAAG
Trigger: ACCTGCCGCTGCCGCTGAGCAGCTCGGCGACCATGC...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR GCA 90 bp CTCCCCCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACTGTATTAAAAAGCTCTaGTGGTCGGGTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPQLLLTESVCLTPQSFYCIKKL*WSGGWE
Trigger: CTCCCACCCACCCGACCAGCAGAGCTTTTTAATACA...GTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGCTCTATTTCTCAGCATaGCCCATCACCTGGAGTACT +
Preference number: 4 (lower is better)
Translates to: FCSLVASERATEGGGAVRLYFSA*PITWST
Trigger: AGTACTCCAGGTGATGGGGCATGCTGAGAAATAGAG...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp AATAGGACTTTGTATTTCTCCATGATCACAGAACCAGGCTCTCAGCTCCCTGATCAGCTCCCTGATTACTaGTGGCTGTGGGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: NRTLYFSMITEPGSQLPDQLPDY*WLWELH
Trigger: GTGGAGCTCCCACAGCCAGCAGTAATCAGGGAGCTG...ATCAGGGAGCTGAGAGCCTGGTTCTGTGATCATGGAGAAATACAAAGTCCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTTTCCTCCTTGACACTCATTCTAAGCAGAACCATCCAAGAAGACATCCAAGCTGCTTCCTGCACAGCCTaGAATGGGTTGTTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LSSLTLILSRTIQEDIQAASCTA*NGLLAS
Trigger: CGAGGCCAACAACCCATTCCAGGCTGTGCAGGAAGC...AGCTTGGATGTCTTCTTGGATGGTTCTGCTTAGAATGAGTGTCAAGGAGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGGGGCTGGGGTTCAGGTaGCATGCGGTGCGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: LHICTRKMKESLCMCVCAGLGFR*HAVRGD
Trigger: GTCGCCACGCACCGCATGCCACCTGAACCCCAGCCC...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CCA 90 bp CCCAGTCTCCCTGAGGAAACGATGGAGTCTGCCCTCCTTCCCCCAATATTCTATCATACAGATAGAGGTTaGAGATCTGCAGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: PSLPEETMESALLPPIFYHTDRG*RSAASG
Trigger: TCCAGATGCTGCAGATCTCCAACCTCTATCTGTATG...ATAGAATATTGGGGGAAGGAGGGCAGACTCCATCGTTTCCTCAGGGAGACTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGCCTCCCACCATTCCATaGCTTAGTGGATTTCCGTAT +
Preference number: 4 (lower is better)
Translates to: FCSLVASERATEGGGAVRPPTIP*LSGFPY
Trigger: ATACGGAAATCCACTAAGCCATGGAATGGTGGGAGG...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CCCAGTCTCCCTGAGGAAACGATGGAGTCTGCCCTCCTTCCCCCAATATTCTATACATTTCCACTTGTTTaGACAGGTCCTGGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: PSLPEETMESALLPPIFYTFPLV*TGPGKS
Trigger: GGACTTTCCAGGACCTGTCCAAACAAGTGGAAATGT...ATAGAATATTGGGGGAAGGAGGGCAGACTCCATCGTTTCCTCAGGGAGACTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
3UTR CAA 72 bp CAAACCCAAGGGAATATTCTTCCTCTACCTGGCCTTTaGTTCCACCACCTCACCTGGTCCATGCAACTAACC +
Preference number: 4 (lower is better)
Translates to: QTQGNILPLPGL*FHHLTWSMQLT
Trigger: GGTTAGTTGCATGGACCAGGTGAGGTGGTGGAACAAAAGGCCAGGTAGAGGAAGAATATTCCCTTGGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp CTTTCCTCCTTGACACTCATTCTAAGCAGAACCATCCAAGAAGACATCCAAGCTCGCTGTCGTAGAACATaGCGAACTTCTGCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: LSSLTLILSRTIQEDIQARCRRT*RTSASA
Trigger: TGCGCTGGCAGAAGTTCGTCATGTTCTACGACAGCG...AGCTTGGATGTCTTCTTGGATGGTTCTGCTTAGAATGAGTGTCAAGGAGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp CCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACTCCCTATTCAAGCCCTTCTCTaGGTCCCATGTCGCCAACTT +
Preference number: 4 (lower is better)
Translates to: PTLTNRVRLPDTTKLLLPIQALL*VPCRQL
Trigger: AAGTTGGCGACATGGGACTCAGAGAAGGGCTTGAAT...AGGGAGTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGCGCTGGCATGGCTGGTaGGGTCACAGCGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: LHICTRKMKESLCMCVCARWHGW*GHSGPC
Trigger: ACATGGGCCGCTGTGACCTCACCAGCCATGCCAGCG...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR TCA 90 bp TCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTGGAGCCAACAGTATGATATaGGAACAGCTCAGTATCAAA +
Preference number: 4 (lower is better)
Translates to: SRSGLERVVKVEGRVCAGANSMI*EQLSIK
Trigger: TTTGATACTGAGCTGTTCTCATATCATACTGTTGGC...TCCAGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATCAGAGTCCGTTTGCCTaGCACCACAAAGCTTCTACT +
Preference number: 4 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHQSPFA*HHKAST
Trigger: AGTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTG...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTTTCCTCCTTGACACTCATTCTAAGCAGAACCATCCAAGAAGACATCCAAGCTTCGGATACCGCCAACTaGAACACCCTGTCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LSSLTLILSRTIQEDIQASDTAN*NTLSSL
Trigger: CAAGGACGACAGGGTGTTCCAGTTGGCGGTATCCGA...AGCTTGGATGTCTTCTTGGATGGTTCTGCTTAGAATGAGTGTCAAGGAGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATGTGAGGCCAGTGATGTaGCCCTTTTTGATGGTATCC +
Preference number: 4 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHVRPVM*PFLMVS
Trigger: GGATACCATCAAAAAGGGCCACATCACTGGCCTCAC...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACTCCCTCCTGGAAAGTCCTTATaGGGTTGTCCATCCTGGACA +
Preference number: 4 (lower is better)
Translates to: PTLTNRVRLPDTTKLLLPPGKSL*GCPSWT
Trigger: TGTCCAGGATGGACAACCCCATAAGGACTTTCCAGG...AGGGAGTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAGTGTGCGGCAGGTTGCTGCTaGGCCCTGATGAGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: HMYKKNERVSVYVCVCECAAGCC*ALMRVS
Trigger: GGACACTCTCATCAGGGCCCAGCAGCAACCTGCCGC...ACACTCGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CCA 90 bp ATCCATGAGGCTGTTCATGCGCCGGTGGACCTGCTCCAAGTTCACTTCTTTGTCGTGTGCGAGTGTGTGTaGTTTGTGTTGTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: IHEAVHAPVDLLQVHFFVVCECV*FVLLFS
Trigger: AGAAAACAACAACACAAACCACACACACTCGCACAC...GACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTCATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGTACAAGCAACTTCCCTaGTGGATGGGAGTTACACTT +
Preference number: 4 (lower is better)
Translates to: FCSLVASERATEGGGAVRYKQLP*WMGVTL
Trigger: AAGTGTAACTCCCATCCACCAGGGAAGTTGCTTGTA...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATCTAGGCTTAGAAAACTaGGCTTCCCTGCAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHLGLEN*ASLQLY
Trigger: GTACAGCTGCAGGGAAGCCCAGTTTTCTAAGCCTAG...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp CATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAGTGTCCCCTCCGTTCTTGCTaGTGGTCCGCCAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: HMYKKNERVSVYVCVCECPLRSC*WSARVQ
Trigger: CTGAACTCTGGCGGACCATCAGCAAGAACGGAGGGG...ACACTCGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR TCA 90 bp CATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAGTGTCGAAGCTGTGCAGCTTaGGGGATTTGCCGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: HMYKKNERVSVYVCVCECRSCAA*GICRRP
Trigger: AGGCCGACGGCAAATCCCTCAAGCTGCACAGCTTCG...ACACTCGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR TCA 90 bp CTTTCCTCCTTGACACTCATTCTAAGCAGAACCATCCAAGAAGACATCCAAGCTCATCTCAGGGGGCAATaGGGAAACAGAGTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LSSLTLILSRTIQEDIQAHLRGQ*GNRVGV
Trigger: CACACCAACTCTGTTTCCTCATTGCCCCCTGAGATG...AGCTTGGATGTCTTCTTGGATGGTTCTGCTTAGAATGAGTGTCAAGGAGGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp AATAGGACTTTGTATTTCTCCATGATCACAGAACCAGGCTCTCAGCTCCCTGATGCAGACGGAAAGATTTaGCGGACCACGGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: NRTLYFSMITEPGSQLPDADGKI*RTTVIL
Trigger: AAGGATGACCGTGGTCCGGCAAATCTTTCCGTCTGC...ATCAGGGAGCTGAGAGCCTGGTTCTGTGATCATGGAGAAATACAAAGTCCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGTTTCTGATTGTCCTTTaGAGACGGAAAGATTTGCCG +
Preference number: 4 (lower is better)
Translates to: FCSLVASERATEGGGAVRFLIVL*RRKDLP
Trigger: CGGCAAATCTTTCCGTCTGCAAAGGACAATCAGAAA...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGTCTGGTCGCCCCTCCTaGCCTCAGAAAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LHICTRKMKESLCMCVCASGRPS*PQKGPG
Trigger: TCCTGGGCCTTTCTGAGGGCAGGAGGGGCGACCAGA...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp CACCTAAGGCGCAAGGCAAGGCTTCCTCCTACCCAAATAAACATGGTCTCTTTTCTAACAGAGTCCGTTTaGCTGACACCACAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: HLRRKARLPPTQINMVSFLTESV*LTPQSF
Trigger: GAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAG...AAAAGAGACCATGTTTATTTGGGTAGGAGGAAGCCTTGCCTTGCGCCTTAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp CCCAGTCTCCCTGAGGAAACGATGGAGTCTGCCCTCCTTCCCCCAATATTCTATGAAATGTCAATGGATTaGCTAGGTAGCACGAATATC +
Preference number: 4 (lower is better)
Translates to: PSLPEETMESALLPPIFYEMSMD*LGSTNI
Trigger: GATATTCGTGCTACCTAGGCAATCCATTGACATTTC...ATAGAATATTGGGGGAAGGAGGGCAGACTCCATCGTTTCCTCAGGGAGACTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CTTTCCTCCTTGACACTCATTCTAAGCAGAACCATCCAAGAAGACATCCAAGCTTTCACAAAGACCCAGTaGCTGTCCTTGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSSLTLILSRTIQEDIQAFTKTQ*LSLEAR
Trigger: CCTGGCTTCCAAGGACAGCCACTGGGTCTTTGTGAA...AGCTTGGATGTCTTCTTGGATGGTTCTGCTTAGAATGAGTGTCAAGGAGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGCCTGCTCCAGGGGGTTaGTGCCCTTGGCTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: LHICTRKMKESLCMCVCAPAPGG*CPWLGS
Trigger: ACTTCCGAGCCAAGGGCACCAACCCCCTGGAGCAGG...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CCA 90 bp CATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAGTGTTTGGGGGTCTCCTGGTaGCACCGGTTGCTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: HMYKKNERVSVYVCVCECLGVSW*HRLLFH
Trigger: GTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAA...ACACTCGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CCA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGGTGTGCGAGTGTGTGTaGTTTGTGTTGTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FCSLVASERATEGGGAVRVCECV*FVLLFS
Trigger: AGAAAACAACAACACAAACCACACACACTCGCACAC...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGCGAAGCTGTGCAGCTTaGGGGATTTGCCGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: LHICTRKMKESLCMCVCARSCAA*GICRRP
Trigger: AGGCCGACGGCAAATCCCTCAAGCTGCACAGCTTCG...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR GCA 90 bp AATAGGACTTTGTATTTCTCCATGATCACAGAACCAGGCTCTCAGCTCCCTGATATGGAAAACAAAGCCTaGTCTTCCTCGGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: NRTLYFSMITEPGSQLPDMENKA*SSSGSW
Trigger: CCATGACCCCGAGGAAGAGCAGGCTTTGTTTTCCAT...ATCAGGGAGCTGAGAGCCTGGTTCTGTGATCATGGAGAAATACAAAGTCCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp AATAGGACTTTGTATTTCTCCATGATCACAGAACCAGGCTCTCAGCTCCCTGATTGGTCCAGAAAGCTTTaGAGCCCACGGATATCATAC +
Preference number: 4 (lower is better)
Translates to: NRTLYFSMITEPGSQLPDWSRKL*SPRISY
Trigger: GTATGATATCCGTGGGCTTCAAAGCTTTCTGGACCA...ATCAGGGAGCTGAGAGCCTGGTTCTGTGATCATGGAGAAATACAAAGTCCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAGGTCCCCTGTGTCCTaGAGCTCCAGGATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LHICTRKMKESLCMCVCARSPVS*SSRILP
Trigger: AGGAAGGATCCTGGAGCTGCAGGACACAGGGGACCT...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CCA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAAGATGGCACCGATGTaGATGATGGAGTCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LHICTRKMKESLCMCVCAKMAPM*MMESAR
Trigger: GCGGGCCGACTCCATCATCCACATCGGTGCCATCTT...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CCA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGCCCAGTGGCTGTCCTTaGAAGCCAGGTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LHICTRKMKESLCMCVCAPSGCP*KPGWSP
Trigger: TGGAGACCAACCTGGCTTCCAAGGACAGCCACTGGG...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CCA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGCTGCACAGCCTGGAATaGGTTGTTGGCCTCGATGAC +
Preference number: 4 (lower is better)
Translates to: LHICTRKMKESLCMCVCALHSLE*VVGLDD
Trigger: GTCATCGAGGCCAACAACCCATTCCAGGCTGTGCAG...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CCA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGCCAGGAGCAAAGAAATaGGGCAGCAAGCTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LHICTRKMKESLCMCVCAPGAKK*GSKLWD
Trigger: GTCCCACAGCTTGCTGCCCCATTTCTTTGCTCCTGG...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAGTGTAGAGGACTCCAGGTCTaGTCTGGAGAGGGTCGTAAA +
Preference number: 4 (lower is better)
Translates to: HMYKKNERVSVYVCVCECRGLQV*SGEGRK
Trigger: TTTACGACCCTCTCCAGACCAGACCTGGAGTCCTCT...ACACTCGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp CTTTCCTCCTTGACACTCATTCTAAGCAGAACCATCCAAGAAGACATCCAAGCTACTTGCGCATGTCTTTaGCAAAAGTCTCACTATAGG +
Preference number: 4 (lower is better)
Translates to: LSSLTLILSRTIQEDIQATCACL*QKSHYR
Trigger: CCTATAGTGAGACTTTTGGCAAAGACATGCGCAAGT...AGCTTGGATGTCTTCTTGGATGGTTCTGCTTAGAATGAGTGTCAAGGAGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp CATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAGTGTTGGTCCAGAAAGCTTTaGAGCCCACGGATATCATAC +
Preference number: 4 (lower is better)
Translates to: HMYKKNERVSVYVCVCECWSRKL*SPRISY
Trigger: GTATGATATCCGTGGGCTTCAAAGCTTTCTGGACCA...ACACTCGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR TCA 90 bp CATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAGTGTTGCCTGCAGGATTTATaGCCCAGAGATAGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: HMYKKNERVSVYVCVCECCLQDL*PRDRPL
Trigger: TAAAGGCCTATCTCTGGGTCATAAATCCTGCAGGCA...ACACTCGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGCTGTGTATTCCATTCTaGCGGGTCTGGAGATCAGAC +
Preference number: 4 (lower is better)
Translates to: LHICTRKMKESLCMCVCALCIPF*RVWRSD
Trigger: GTCTGATCTCCAGACCCGTCAGAATGGAATACACAG...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp AATAGGACTTTGTATTTCTCCATGATCACAGAACCAGGCTCTCAGCTCCCTGATTGTGAGATAAGGCAGTaGGACCAGAGTTTGATTAAA +
Preference number: 4 (lower is better)
Translates to: NRTLYFSMITEPGSQLPDCEIRQ*DQSLIK
Trigger: TTTAATCAAACTCTGGTCTCACTGCCTTATCTCACA...ATCAGGGAGCTGAGAGCCTGGTTCTGTGATCATGGAGAAATACAAAGTCCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR TCA 90 bp AATAGGACTTTGTATTTCTCCATGATCACAGAACCAGGCTCTCAGCTCCCTGATCCTAGAGAACTTGCTTaGATATCAATCATTTCCCCT +
Preference number: 4 (lower is better)
Translates to: NRTLYFSMITEPGSQLPDPRELA*ISIISP
Trigger: AGGGGAAATGATTGATATTCAAGCAAGTTCTCTAGG...ATCAGGGAGCTGAGAGCCTGGTTCTGTGATCATGGAGAAATACAAAGTCCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp CATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAGTGTTGTTTGGACAGGTCCTaGAAAGTCCTTATGGGGTTG +
Preference number: 4 (lower is better)
Translates to: HMYKKNERVSVYVCVCECCLDRS*KVLMGL
Trigger: CAACCCCATAAGGACTTTCCAGGACCTGTCCAAACA...ACACTCGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
3UTR CAA 72 bp CTCTACAAGGCTATAGAAGAAGCAATCAATAGGACTTaGTATTTCTCCATGATCACAGAACCAGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LYKAIEEAINRT*YFSMITEPGSQ
Trigger: CTGAGAGCCTGGTTCTGTGATCATGGAGAAATACAAAGTCCTATTGATTGCTTCTTCTATAGCCTTGTAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp CATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAGTGTTGGGAGTTACACTTATaGTTCTCACCTAAGGCGCAA +
Preference number: 4 (lower is better)
Translates to: HMYKKNERVSVYVCVCECWELHL*FSPKAQ
Trigger: TTGCGCCTTAGGTGAGAAGCATAAGTGTAACTCCCA...ACACTCGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR GCA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGGTTTGTTGGACTGCCTaGAGGATTTATGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: LHICTRKMKESLCMCVCAVCWTA*RIYDPE
Trigger: CTCTGGGTCATAAATCCTGCAGGCAGTCCAACAAAC...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CCA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGTGTTTGGACAGGTCCTaGAAAGTCCTTATGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LHICTRKMKESLCMCVCACLDRS*KVLMGL
Trigger: CAACCCCATAAGGACTTTCCAGGACCTGTCCAAACA...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
3UTR CAA 72 bp TCTCTGTGTATGTGTGTGTGTGCGAGTGTGTGTGGTTaGTGTTGTTGTTTTCTTGTATTAAAAAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SLCMCVCASVCG*CCCFLVLKSSA
Trigger: AGCAGAGCTTTTTAATACAAGAAAACAACAACACAAACCACACACACTCGCACACACACACATACACAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR TCA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAGATACATTCTGAGCTaGCACAGAAATCTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LHICTRKMKESLCMCVCARYILS*HRNLSW
Trigger: CCAACTCAGATTTCTGTGTCAGCTCAGAATGTATCT...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS CCA 90 bp GCTTCGGGGGAGGCTGAGGCGGTGGCGGCGGCGGCCGGGCCGGCGTaGCGGCTCTGGGCTGGCTGTGTGTCTGAGCCCCGGCGAGGAGCG +
Preference number: 5 (lower is better)
Translates to: ASGEAEAVAAAAGPA*RLWAGCVSEPRRGA
Trigger: CGCTCCTCGCCGGGGCTCAGACACACAGCCAGCCCAGAGCCGCCACGCCGGCCCGGCCGCCGCCGCCACCGCCTCAGCCTCCCCCGAAGC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS CCA 90 bp GGACGGGTGGTCTCGAAGCCAGTGTGTAGGCCTCACCATCGGGGCTaGGGTTCAGGTGGCATGCGGTGCGTGGCGACCCTCCCGGGTTGC +
Preference number: 5 (lower is better)
Translates to: GRVVSKPVCRPHHRG*GSGGMRCVATLPGC
Trigger: GCAACCCGGGAGGGTCGCCACGCACCGCATGCCACCTGAACCCCAGCCCCGATGGTGAGGCCTACACACTGGCTTCGAGACCACCCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp GCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCTCCTGCTCCAGGGGGTaGGTGCCCTTGGCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: AGGQAAQSDGGPVGGVQSSCSRG*VPLARK
Trigger: CTTCCGAGCCAAGGGCACCAACCCCCTGGAGCAGGA...GCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS CCA 90 bp AAGACCCCGGCGAAGCTGTGCAGCTTGAGGGATTTGCCGTCGGCCTaGGCGCTGGCATGGCTGGTGAGGTCACAGCGGCCCATGTGCGGC +
Preference number: 5 (lower is better)
Translates to: KTPAKLCSLRDLPSA*ALAWLVRSQRPMCG
Trigger: GCCGCACATGGGCCGCTGTGACCTCACCAGCCATGCCAGCGCCCAGGCCGACGGCAAATCCCTCAAGCTGCACAGCTTCGCCGGGGTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp GGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCGAAGCTGTGCAGCTaGAGGGATTTGCCGTCGGCC +
Preference number: 5 (lower is better)
Translates to: GQEGRRRSQMEVPWEVSRAKLCS*RDLPSA
Trigger: GGCCGACGGCAAATCCCTCAAGCTGCACAGCTTCGC...TCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS GCA 90 bp GTGTGTAGGCCTCACCATCGGGGCTGGGGTTCAGGTGGCATGCGGTaGGTGGCGACCCTCCCGGGTTGCGCTGGACAAAGAGGTGTGGGA +
Preference number: 5 (lower is better)
Translates to: VCRPHHRGWGSGGMR*VATLPGCAGQRGVG
Trigger: TCCCACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGCCACGCACCGCATGCCACCTGAACCCCAGCCCCGATGGTGAGGCCTACACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS GCA 90 bp TCGGCCTGGGCGCTGGCATGGCTGGTGAGGTCACAGCGGCCCATGTaGGGCCACCACTTCTGCTTCAGCACATCCAGGTCCCCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: SAWALAWLVRSQRPM*GHHFCFSTSRSPVS
Trigger: GGACACAGGGGACCTGGATGTGCTGAAGCAGAAGTGGTGGCCGCACATGGGCCGCTGTGACCTCACCAGCCATGCCAGCGCCCAGGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 90 bp GTAGGCCTCACCATCGGGGCTGGGGTTCAGGTGGCATGCGGTGCGTaGCGACCCTCCCGGGTTGCGCTGGACAAAGAGGTGTGGGATGTG +
Preference number: 5 (lower is better)
Translates to: VGLTIGAGVQVACGA*RPSRVALDKEVWDV
Trigger: CACATCCCACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGCCACGCACCGCATGCCACCTGAACCCCAGCCCCGATGGTGAGGCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 90 bp CAGGTTGGTCTCCACGGCCTCGTTGATGAAGGAGTGGGCTCCCTGTaGGCTGAGCAGCAGGATGGCGCGGCGAAGCGTGTCCCGGTAGCG +
Preference number: 5 (lower is better)
Translates to: QVGLHGLVDEGVGSL*AEQQDGAAKRVPVA
Trigger: CGCTACCGGGACACGCTTCGCCGCGCCATCCTGCTGCTCAGCCCACAGGGAGCCCACTCCTTCATCAACGAGGCCGTGGAGACCAACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp GCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCACCCAGTGGCTGTCCTaGGAAGCCAGGTTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: AGGQAAQSDGGPVGGVQSTQWLS*EARLVS
Trigger: GGAGACCAACCTGGCTTCCAAGGACAGCCACTGGGT...GCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp CAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCGCCCATGGGCCTCTCTaGCAAGCTGCCATTCAAGCC +
Preference number: 5 (lower is better)
Translates to: QEGRRRSQMEVPWEVSRAAHGPL*QAAIQA
Trigger: GGCTTGAATGGCAGCTTGCAAGAGAGGCCCATGGGC...GGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS CCA 90 bp GGGTTCAGGTGGCATGCGGTGCGTGGCGACCCTCCCGGGTTGCGCTaGACAAAGAGGTGTGGGATGTGCATGGCATCCGTGAGGGACTGC +
Preference number: 5 (lower is better)
Translates to: GFRWHAVRGDPPGLR*TKRCGMCMASVRDC
Trigger: GCAGTCCCTCACGGATGCCATGCACATCCCACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGCCACGCACCGCATGCCACCTGAACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp GTGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGCCAAGTCTGCTCTCTaGCTGATGAGCTCCCCGATC +
Preference number: 5 (lower is better)
Translates to: VGRRAGGAVRWRSRGRCPAKSAL*LMSSPI
Trigger: GATCGGGGAGCTCATCAGCAAGAGAGCAGACTTGGC...TGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS CCA 90 bp TGCGGTGCGTGGCGACCCTCCCGGGTTGCGCTGGACAAAGAGGTGTaGGATGTGCATGGCATCCGTGAGGGACTGCAGGGCATTGGCAGA +
Preference number: 5 (lower is better)
Translates to: CGAWRPSRVALDKEV*DVHGIREGLQGIGR
Trigger: TCTGCCAATGCCCTGCAGTCCCTCACGGATGCCATGCACATCCCACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGCCACGCACCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp GTGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAACAGCCTGGAATGGGTaGTTGGCCTCGATGACCTTG +
Preference number: 5 (lower is better)
Translates to: VGRRAGGAVRWRSRGRCPTAWNG*LASMTL
Trigger: CAAGGTCATCGAGGCCAACAACCCATTCCAGGCTGT...TGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp AGCCGATCACCCTACAGCACAGCAACCCAGTGGGCCAGCCCAATGCGGGCTCCAGTCTCCACGGCCTCGTaGATGAAGGAGTGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: SRSPYSTATQWASPMRAPVSTAS*MKEWAP
Trigger: GGGAGCCCACTCCTTCATCAACGAGGCCGTGGAGAC...TGGAGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCTGTAGGGTGATCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp CAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCTGCAGACGGAAAGATTaGCCGGACCACGGTCATCCT +
Preference number: 5 (lower is better)
Translates to: QEGRRRSQMEVPWEVSRACRRKD*PDHGHP
Trigger: AGGATGACCGTGGTCCGGCAAATCTTTCCGTCTGCA...GGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp GGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAAGGGGGTTGGTGCCCTaGGCTCGGAAGTACTCATAT +
Preference number: 5 (lower is better)
Translates to: GQEGRRRSQMEVPWEVSRRGLVP*ARKYSY
Trigger: ATATGAGTACTTCCGAGCCAAGGGCACCAACCCCCT...TCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp GGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTTCCTGCTCCAGGGGGTaGGTGCCCTTGGCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: GAASCGTRQRVACGVPRLSCSRG*VPLARK
Trigger: CTTCCGAGCCAAGGGCACCAACCCCCTGGAGCAGGA...AAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS GCA 90 bp CGTGGCGACCCTCCCGGGTTGCGCTGGACAAAGAGGTGTGGGATGTaGATGGCATCCGTGAGGGACTGCAGGGCATTGGCAGATGCACAG +
Preference number: 5 (lower is better)
Translates to: RGDPPGLRWTKRCGM*MASVRDCRALADAQ
Trigger: CTGTGCATCTGCCAATGCCCTGCAGTCCCTCACGGATGCCATGCACATCCCACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp GGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGAGCCTCTGGATTTAAGAGTCAATCCTaGGAGGCGGCTGCCCATGGG +
Preference number: 5 (lower is better)
Translates to: GRRRSQMEVPWEVSRASGFKSQS*EAAAHG
Trigger: CCCATGGGCAGCCGCCTCCAAGGATTGACTCTTAAA...TCCAGAGGCTCTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp AGCCGATCACCCTACAGCACAGCAACCCAGTGGGCCAGCCCAATGCGGGCTCCATCCTGGTGGCACCGGTaGCTGTTCCACCACAACTCC +
Preference number: 5 (lower is better)
Translates to: SRSPYSTATQWASPMRAPSWWHR*LFHHNS
Trigger: GGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGA...TGGAGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCTGTAGGGTGATCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS CCA 90 bp ATGGCACCGATGTGGATGATGGAGTCGGCCCGCACCGACACGCACTaGCATATCCAGGGGAGAAGCCACAGCGTCAGCGCTTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: MAPMWMMESARTDTH*HIQGRSHSVSASMS
Trigger: GGACATGGAAGCGCTGACGCTGTGGCTTCTCCCCTGGATATGCCAGTGCGTGTCGGTGCGGGCCGACTCCATCATCCACATCGGTGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 90 bp CAGCTCCGTCACCAGCCTGAGCATGACATCATTGAGGCGGACGGGTaGTCTCGAAGCCAGTGTGTAGGCCTCACCATCGGGGCTGGGGTT +
Preference number: 5 (lower is better)
Translates to: QLRHQPEHDIIEADG*SRSQCVGLTIGAGV
Trigger: AACCCCAGCCCCGATGGTGAGGCCTACACACTGGCTTCGAGACCACCCGTCCGCCTCAATGATGTCATGCTCAGGCTGGTGACGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 90 bp TGCGCCGGTGGACCTGCTCCAAGTTCACTTCTTTGTCCCTACAGGTaGTCTCTCCAGGTCAGGGTGGAGGCACATGGGCGGGGCAGGGTA +
Preference number: 5 (lower is better)
Translates to: CAGGPAPSSLLCPYR*SLQVRVEAHGRGRV
Trigger: TACCCTGCCCCGCCCATGTGCCTCCACCCTGACCTGGAGAGACCACCTGTAGGGACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552278.2
CDS-3UTR CAA 90 bp GGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTACCCAGTGGCTGTCCTaGGAAGCCAGGTTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GAASCGTRQRVACGVPRLTQWLS*EARLVS
Trigger: GGAGACCAACCTGGCTTCCAAGGACAGCCACTGGGT...AAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp TGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGTCCCATGTCGCCAACTaGCGCATGTCTTTGCCAAAA +
Preference number: 5 (lower is better)
Translates to: WAGGQAAQSDGGPVGGVQSHVAN*RMSLPK
Trigger: TTTTGGCAAAGACATGCGCAAGTTGGCGACATGGGA...CTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp TTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAAAGCGGCAGCGGCAGGTaGCTGCTGGGCCCTGATGAG +
Preference number: 5 (lower is better)
Translates to: FFVLLGGLLVAPVAVPPQSGSGR*LLGPDE
Trigger: CTCATCAGGGCCCAGCAGCAACCTGCCGCTGCCGCT...TTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS GCA 90 bp CGCTGGACAAAGAGGTGTGGGATGTGCATGGCATCCGTGAGGGACTaGAGGGCATTGGCAGATGCACAGCCAGTGGACGTGACCAAGGCC +
Preference number: 5 (lower is better)
Translates to: RWTKRCGMCMASVRD*RALADAQPVDVTKA
Trigger: GGCCTTGGTCACGTCCACTGGCTGTGCATCTGCCAATGCCCTGCAGTCCCTCACGGATGCCATGCACATCCCACACCTCTTTGTCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS GCA 90 bp GCTGTTGCCGATGACAGTCACCGAGCAGTCGTCATCCGTCAGGGCTaGGTATTCCACCACGGCCACATCCCACAGGAAGGCGTAGTTCCC +
Preference number: 5 (lower is better)
Translates to: AVADDSHRAVVIRQG*VFHHGHIPQEGVVP
Trigger: GGGAACTACGCCTTCCTGTGGGATGTGGCCGTGGTGGAATACGCAGCCCTGACGGATGACGACTGCTCGGTGACTGTCATCGGCAACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp ATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTTCCTCGGGCGACCCTCCCGGGTaGCGCTGGACAAAGAGGTGT +
Preference number: 5 (lower is better)
Translates to: IQGRAPNVLMENKACSSSGDPPG*RWTKRC
Trigger: ACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGCC...CGAGGAAGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp GATGAGAGTGTCCGGCTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGTCCTTGGAAGCCAGGTaGGTCTCCACGGCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: DESVRLVPWLLCSGRKVLSLEAR*VSTASL
Trigger: CAACGAGGCCGTGGAGACCAACCTGGCTTCCAAGGA...CAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACTCTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS CCA 90 bp AGACAATCCAGATGGCGCTGTGCAGAGTGGCAGAAGCTGACGGCCTaGGCTGGGCAGCACTCTGAGCCCTCACAGCCTGTATCCTGTTCA +
Preference number: 5 (lower is better)
Translates to: RQSRWRCAEWQKLTA*AGQHSEPSQPVSCS
Trigger: TGAACAGGATACAGGCTGTGAGGGCTCAGAGTGCTGCCCAGCCCAGGCCGTCAGCTTCTGCCACTCTGCACAGCGCCATCTGGATTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp AGTGTCCGGCTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGACCGAGTGCAGGATGTCATCGTaGAGGCTCAGGTCGGATACC +
Preference number: 5 (lower is better)
Translates to: SVRLVPWLLCSGRKVLTECRMSS*RLRSDT
Trigger: GGTATCCGACCTGAGCCTCAACGATGACATCCTGCA...CTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp TTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAAGTCTCCACGGCCTCGTaGATGAAGGAGTGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: FFVLLGGLLVAPVAVPPQVSTAS*MKEWAP
Trigger: GGGAGCCCACTCCTTCATCAACGAGGCCGTGGAGAC...TTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp ATGCAGAAGACCCCGGCGAAGCTGTGCAGCTTGAGGGATTTGCCGTCGGCCTGGTTAAAGCCCAGAGCCTaGGCCAGTGCATCCAGGACA +
Preference number: 5 (lower is better)
Translates to: MQKTPAKLCSLRDLPSAWLKPRA*ASASRT
Trigger: TGTCCTGGATGCACTGGCCAAGGCTCTGGGCTTTAA...CCAGGCCGACGGCAAATCCCTCAAGCTGCACAGCTTCGCCGGGGTCTTCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp CTCTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTACTCCCGTGGACTGGACACGCAGTaGTCAGCCCCTCCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: LCSGRKVLTESWVFWYSRGLDTQ*SAPPFL
Trigger: CAAGAACGGAGGGGCTGACAACTGCGTGTCCAGTCC...ACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp GGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTCTGCTCTGGGTTGGATaGCTGCTTGAAGAGGACTCC +
Preference number: 5 (lower is better)
Translates to: GAASCGTRQRVACGVPRLLLWVG*LLEEDS
Trigger: GGAGTCCTCTTCAAGCAGCAATCCAACCCAGAGCAG...AAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS TCA 90 bp CTTCTGAAGGACTGGACACGCAGTTGTCAGCCCCTCCGTTCTTGCTaGTGGTCCGCCAGAGTTCAGCAAACGTGCTGTCCTGCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: LLKDWTRSCQPLRSC*WSARVQQTCCPAPG
Trigger: CCCTGGAGCAGGACAGCACGTTTGCTGAACTCTGGCGGACCATCAGCAAGAACGGAGGGGCTGACAACTGCGTGTCCAGTCCTTCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS GCA 90 bp TGGGATGTGCATGGCATCCGTGAGGGACTGCAGGGCATTGGCAGATaGACAGCCAGTGGACGTGACCAAGGCCAAAATCCCCTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: WDVHGIREGLQGIGR*TASGRDQGQNPLGH
Trigger: ATGACCCAGGGGATTTTGGCCTTGGTCACGTCCACTGGCTGTGCATCTGCCAATGCCCTGCAGTCCCTCACGGATGCCATGCACATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 90 bp CTCTGCAGGATGTCATCGTTGAGGCTCAGGTCGGATACCGCCAACTaGAACACCCTGTCGTCCTTGGCCGCGTTCTCCTCGAAGATGGCA +
Preference number: 5 (lower is better)
Translates to: LCRMSSLRLRSDTAN*NTLSSLAAFSSKMA
Trigger: TGCCATCTTCGAGGAGAACGCGGCCAAGGACGACAGGGTGTTCCAGTTGGCGGTATCCGACCTGAGCCTCAACGATGACATCCTGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp ATCCATGAGGCTGTTCATGCGCCGGTGGACCTGCTCCAAGTTCACTTCTTTGTCGGCGACCCTCCCGGGTaGCGCTGGACAAAGAGGTGT +
Preference number: 5 (lower is better)
Translates to: IHEAVHAPVDLLQVHFFVGDPPG*RWTKRC
Trigger: ACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGCC...GACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTCATGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp GAGCAAAGAAATGGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGCTGAGCATGACATCATaGAGGCGGACGGGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: EQRNGAASCGTRQRVACGLSMTS*RRTGGL
Trigger: GAGACCACCCGTCCGCCTCAATGATGTCATGCTCAG...CCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCCATTTCTTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp AGTGTCCGGCTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGACCGAGGATTTCCGTATGCAGTaGAGGCTCGCCATGCTATGC +
Preference number: 5 (lower is better)
Translates to: SVRLVPWLLCSGRKVLTEDFRMQ*RLAMLC
Trigger: GCATAGCATGGCGAGCCTCAACTGCATACGGAAATC...CTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp ATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTTCCTCGGCCCATGGGCCTCTCTaGCAAGCTGCCATTCAAGCC +
Preference number: 5 (lower is better)
Translates to: IQGRAPNVLMENKACSSSAHGPL*QAAIQA
Trigger: GGCTTGAATGGCAGCTTGCAAGAGAGGCCCATGGGC...CGAGGAAGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp TGGGCAGGAGGGCAGGCGGCGCAGTCAGATGGAGGTCCCGTGGGAGGTGTCCAGATAAGACATTTCCACTaGTTTGGACAGGTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: WAGGQAAQSDGGPVGGVQIRHFH*FGQVLE
Trigger: TTCCAGGACCTGTCCAAACAAGTGGAAATGTCTTAT...CTGGACACCTCCCACGGGACCTCCATCTGACTGCGCCGCCTGCCCTCCTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp TTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAATCCTGGTGGCACCGGTaGCTGTTCCACCACAACTCC +
Preference number: 5 (lower is better)
Translates to: FFVLLGGLLVAPVAVPPQSWWHR*LFHHNS
Trigger: GGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGA...TTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp CTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTACTCCCGTGTACTTCTTTGTCCTCCTaGGGGGTCTCCTGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: LLWQKGADRELGVLVLPCTSLSS*GVSWWH
Trigger: GTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGT...ACACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp GGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTTCCAAGTTCACTTCTTaGTCCTCCTTGGGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GAASCGTRQRVACGVPRLSKFTS*SSLGVS
Trigger: GGAGACCCCCAAGGAGGACAAAGAAGTGAACTTGGA...AAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGAGCGGCAGCGGCAGGTaGCTGCTGGGCCCTGATGAG +
Preference number: 5 (lower is better)
Translates to: FCSLVASERATEGGGAVRSGSGR*LLGPDE
Trigger: CTCATCAGGGCCCAGCAGCAACCTGCCGCTGCCGCT...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp ATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTTCCTCGGGCCCCTGCTCTGGGTaGGATTGCTGCTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: IQGRAPNVLMENKACSSSGPCSG*DCCLKR
Trigger: CCTCTTCAAGCAGCAATCCAACCCAGAGCAGGGGCC...CGAGGAAGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS GCA 90 bp TCCGCCAGAGTTCAGCAAACGTGCTGTCCTGCTCCAGGGGGTTGGTaGCCTTGGCTCGGAAGTACTCATATACAGCAGAATCCCGGACAG +
Preference number: 5 (lower is better)
Translates to: SARVQQTCCPAPGGW*PWLGSTHIQQNPGQ
Trigger: CTGTCCGGGATTCTGCTGTATATGAGTACTTCCGAGCCAAGGGCACCAACCCCCTGGAGCAGGACAGCACGTTTGCTGAACTCTGGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 90 bp TGGTCCGCCAGAGTTCAGCAAACGTGCTGTCCTGCTCCAGGGGGTTaGTGCCCTTGGCTCGGAAGTACTCATATACAGCAGAATCCCGGA +
Preference number: 5 (lower is better)
Translates to: WSARVQQTCCPAPGG*CPWLGSTHIQQNPG
Trigger: TCCGGGATTCTGCTGTATATGAGTACTTCCGAGCCAAGGGCACCAACCCCCTGGAGCAGGACAGCACGTTTGCTGAACTCTGGCGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp GAGGCTGTTCATGCGCCGGTGGACCTGCTCCAAGTTCACTTCTTTGTCCTCCTTAACACCCTGTCGTCCTaGGCCGCGTTCTCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: EAVHAPVDLLQVHFFVLLNTLSS*AAFSSK
Trigger: CTTCGAGGAGAACGCGGCCAAGGACGACAGGGTGTT...AAGGAGGACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp AGTGTCCGGCTGGTGCCATGGCTGCTCTGCTCTGGCAGAAAGGTGCTGACCGAGAAAGTCCTTATGGGGTaGTCCATCCTGGACACTGTG +
Preference number: 5 (lower is better)
Translates to: SVRLVPWLLCSGRKVLTEKVLMG*SILDTV
Trigger: CACAGTGTCCAGGATGGACAACCCCATAAGGACTTT...CTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp TCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTGGATCAGCCCCTCCGTTCTaGCTGATGGTCCGCCAGAGT +
Preference number: 5 (lower is better)
Translates to: SRSGLERVVKVEGRVCAGSAPPF*LMVRQS
Trigger: ACTCTGGCGGACCATCAGCAAGAACGGAGGGGCTGA...TCCAGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp GAGGCTGTTCATGCGCCGGTGGACCTGCTCCAAGTTCACTTCTTTGTCCTCCTTTCAGCCCCTCCGTTCTaGCTGATGGTCCGCCAGAGT +
Preference number: 5 (lower is better)
Translates to: EAVHAPVDLLQVHFFVLLSAPPF*LMVRQS
Trigger: ACTCTGGCGGACCATCAGCAAGAACGGAGGGGCTGA...AAGGAGGACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp ATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTTCCTCGTGGAGCCAGCCCTGTTaGTTGGACTGCCTGCAGGAT +
Preference number: 5 (lower is better)
Translates to: IQGRAPNVLMENKACSSSWSQPC*LDCLQD
Trigger: ATCCTGCAGGCAGTCCAACAAACAGGGCTGGCTCCA...CGAGGAAGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS GCA 90 bp CCGTTCTTGCTGATGGTCCGCCAGAGTTCAGCAAACGTGCTGTCCTaGTCCAGGGGGTTGGTGCCCTTGGCTCGGAAGTACTCATATACA +
Preference number: 5 (lower is better)
Translates to: PFLLMVRQSSANVLS*SRGLVPLARKYSYT
Trigger: TGTATATGAGTACTTCCGAGCCAAGGGCACCAACCCCCTGGAGCAGGACAGCACGTTTGCTGAACTCTGGCGGACCATCAGCAAGAACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp CAAGTTCACTTCTTTGTCCTCCTTGGGGGTCTCCTGGTGGCACCGGTTGCTGTTCTGAGCATGACATCATaGAGGCGGACGGGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: QVHFFVLLGGLLVAPVAVLSMTS*RRTGGL
Trigger: GAGACCACCCGTCCGCCTCAATGATGTCATGCTCAG...AACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGTGAACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp GGGGTCTCCTGGTGGCACCGGTTGCTGTTCCACCACAACTCCAGGGCAGCCACCACGTGGCTAATGTTCTaGTCCACCTTTTGTAAAGAG +
Preference number: 5 (lower is better)
Translates to: GVSWWHRLLFHHNSRAATTWLMF*STFCKE
Trigger: CTCTTTACAAAAGGTGGACAAGAACATTAGCCACGT...GGTGGCTGCCCTGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp ATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTTCCTCGTTTAAGAGTCAATCCTaGGAGGCGGCTGCCCATGGG +
Preference number: 5 (lower is better)
Translates to: IQGRAPNVLMENKACSSSFKSQS*EAAAHG
Trigger: CCCATGGGCAGCCGCCTCCAAGGATTGACTCTTAAA...CGAGGAAGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp ATGCAGAAGACCCCGGCGAAGCTGTGCAGCTTGAGGGATTTGCCGTCGGCCTGGGACATTTCCACTTGTTaGGACAGGTCCTGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: MQKTPAKLCSLRDLPSAWDISTC*DRSWKV
Trigger: GACTTTCCAGGACCTGTCCAAACAAGTGGAAATGTC...CCAGGCCGACGGCAAATCCCTCAAGCTGCACAGCTTCGCCGGGGTCTTCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp ATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTTCCTCGTTGCTGCTGATGCTGTaGCCGATGACAGTCACCGAG +
Preference number: 5 (lower is better)
Translates to: IQGRAPNVLMENKACSSSLLLML*PMTVTE
Trigger: CTCGGTGACTGTCATCGGCAACAGCATCAGCAGCAA...CGAGGAAGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp CTCTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTACTCCCGTTCCAAGTTCACTTCTTaGTCCTCCTTGGGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: LCSGRKVLTESWVFWYSRSKFTS*SSLGVS
Trigger: GGAGACCCCCAAGGAGGACAAAGAAGTGAACTTGGA...ACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS CCA 90 bp AGAGTTCAGCAAACGTGCTGTCCTGCTCCAGGGGGTTGGTGCCCTTaGCTCGGAAGTACTCATATACAGCAGAATCCCGGACAGTGCCAT +
Preference number: 5 (lower is better)
Translates to: RVQQTCCPAPGGWCP*LGSTHIQQNPGQCH
Trigger: ATGGCACTGTCCGGGATTCTGCTGTATATGAGTACTTCCGAGCCAAGGGCACCAACCCCCTGGAGCAGGACAGCACGTTTGCTGAACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGGGACTGGACACGCAGTaGTCAGCCCCTCCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: FCSLVASERATEGGGAVRGLDTQ*SAPPFL
Trigger: CAAGAACGGAGGGGCTGACAACTGCGTGTCCAGTCC...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp TCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTGGAGGGTTGGATTGCTGCTaGAAGAGGACTCCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: SRSGLERVVKVEGRVCAGGLDCC*KRTPGL
Trigger: CAGACCTGGAGTCCTCTTCAAGCAGCAATCCAACCC...TCCAGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS GCA 90 bp GGAGGAGATGCGGTGGTTGTTCCTCGTGCATTTCTGATTGTCCTTTaGAGACGGAAAGATTTGCCGGACCACGGTCATCCTTCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: GGDAVVVPRAFLIVL*RRKDLPDHGHPSKG
Trigger: GCCCTTGGAAGGATGACCGTGGTCCGGCAAATCTTTCCGTCTGCAAAGGACAATCAGAAATGCACGAGGAACAACCACCGCATCTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp GGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGGTTCCTCGTCTTATTTCTGATTGTCCTTaGCAGACGGAAAGATTTGCC +
Preference number: 5 (lower is better)
Translates to: GAASCGTRQRVACGVPRLISDCP*QTERFA
Trigger: GGCAAATCTTTCCGTCTGCAAAGGACAATCAGAAAT...AAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp ATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTTCCTCGGTGATGTGGCCCTTTTaGATGGTATCCAGCATGGAC +
Preference number: 5 (lower is better)
Translates to: IQGRAPNVLMENKACSSSVMWPF*MVSSMD
Trigger: GTCCATGCTGGATACCATCAAAAAGGGCCACATCAC...CGAGGAAGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp TTGACCATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTGGAAGATTCGCCACCTaGCTGTACGAAGGCTCCATA +
Preference number: 5 (lower is better)
Translates to: LTIQGRAPNVLMENKACSGRFAT*LYEGSI
Trigger: TATGGAGCCTTCGTACAGCAAGGTGGCGAATCTTCC...AGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAATGGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp CCCAGTCTCCCTGAGGAAACGATGGAGTCTGCCCTCCTTCCCCCAATATTCTATAGGGGGTTGGTGCCCTaGGCTCGGAAGTACTCATAT +
Preference number: 5 (lower is better)
Translates to: PSLPEETMESALLPPIFYRGLVP*ARKYSY
Trigger: ATATGAGTACTTCCGAGCCAAGGGCACCAACCCCCT...ATAGAATATTGGGGGAAGGAGGGCAGACTCCATCGTTTCCTCAGGGAGACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp ATCCATGAGGCTGTTCATGCGCCGGTGGACCTGCTCCAAGTTCACTTCTTTGTCTTGGGTGACCTGTGTTaGCACTGCATGGAGGGCATG +
Preference number: 5 (lower is better)
Translates to: IHEAVHAPVDLLQVHFFVLGDLC*HCMEGM
Trigger: CATGCCCTCCATGCAGTGCAAACACAGGTCACCCAA...GACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTCATGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp GAGCAAAGAAATGGGGCAGCAAGCTGTGGGACAAGGCAGCGAGTGGCATGTGGGACTAACAGAGTCCGTTaGCCTGACACCACAAAGCTT +
Preference number: 5 (lower is better)
Translates to: EQRNGAASCGTRQRVACGTNRVR*PDTTKL
Trigger: AAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGT...CCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCCATTTCTTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS CCA 90 bp GACGGAAAGATTTGCCGGACCACGGTCATCCTTCCAAGGGCACTATaGACCAGATCCAGGATCTCCGGGTCACTGATTTCCTCATTCACA +
Preference number: 5 (lower is better)
Translates to: DGKICRTTVILPRAL*TRSRISGSLISSFT
Trigger: TGTGAATGAGGAAATCAGTGACCCGGAGATCCTGGATCTGGTCCATAGTGCCCTTGGAAGGATGACCGTGGTCCGGCAAATCTTTCCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 90 bp ACGAAAGGCTCTTCCAAGACAGTCACCACTTTAAGAGTCAATCCTTaGAGGCGGCTGCCCATGGGCCTCTCTTGCAAGCTGCCATTCAAG +
Preference number: 5 (lower is better)
Translates to: TKGSSKTVTTLRVNP*RRLPMGLSCKLPFK
Trigger: CTTGAATGGCAGCTTGCAAGAGAGGCCCATGGGCAGCCGCCTCCAAGGATTGACTCTTAAAGTGGTGACTGTCTTGGAAGAGCCTTTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 90 bp TGGCCAGTGCATCCAGGACATCTATGGAGAACCCTTTGTAGCGCTTaGGCTGTCCTAGGATGTTCTCAGCCACCATCACGAAAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: WPVHPGHLWRTLCSA*AVLGCSQPPSRKAL
Trigger: AAGAGCCTTTCGTGATGGTGGCTGAGAACATCCTAGGACAGCCCAAGCGCTACAAAGGGTTCTCCATAGATGTCCTGGATGCACTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATAACACCCTGTCGTCCTaGGCCGCGTTCTCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHNTLSS*AAFSSK
Trigger: CTTCGAGGAGAACGCGGCCAAGGACGACAGGGTGTT...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp TTCTGTAGTTTAGTTGCCTCAGAAAGGGCAACTGAAGGAGGGGGCGCTGTTAGGGCCTGGAATGGGTTGTaGGCCTCGATGACCTTGATG +
Preference number: 5 (lower is better)
Translates to: FCSLVASERATEGGGAVRAWNGL*ASMTLM
Trigger: CATCAAGGTCATCGAGGCCAACAACCCATTCCAGGC...CCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAACTAAACTACAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp CACCTAAGGCGCAAGGCAAGGCTTCCTCCTACCCAAATAAACATGGTCTCTTTTTCCTTGGAAGCCAGGTaGGTCTCCACGGCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: HLRRKARLPPTQINMVSFSLEAR*VSTASL
Trigger: CAACGAGGCCGTGGAGACCAACCTGGCTTCCAAGGA...AAAAGAGACCATGTTTATTTGGGTAGGAGGAAGCCTTGCCTTGCGCCTTAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp GAGGCTGTTCATGCGCCGGTGGACCTGCTCCAAGTTCACTTCTTTGTCCTCCTTGTGATGTGGCCCTTTTaGATGGTATCCAGCATGGAC +
Preference number: 5 (lower is better)
Translates to: EAVHAPVDLLQVHFFVLLVMWPF*MVSSMD
Trigger: GTCCATGCTGGATACCATCAAAAAGGGCCACATCAC...AAGGAGGACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp ATCCATGAGGCTGTTCATGCGCCGGTGGACCTGCTCCAAGTTCACTTCTTTGTCGGAAGATTCGCCACCTaGCTGTACGAAGGCTCCATA +
Preference number: 5 (lower is better)
Translates to: IHEAVHAPVDLLQVHFFVGRFAT*LYEGSI
Trigger: TATGGAGCCTTCGTACAGCAAGGTGGCGAATCTTCC...GACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTCATGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp CCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACTCCCTGGTGGAAGGGAGAGTTaGTGCTGGAGCCAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: PTLTNRVRLPDTTKLLLPGGRES*CWSQPC
Trigger: ACAGGGCTGGCTCCAGCACAAACTCTCCCTTCCACC...AGGGAGTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS CCA 90 bp GTGGCCCTTTTTGATGGTATCCAGCATGGACCTCCCACCATTCCATaGCTTAGTGGATTTCCGTATGCAGTTGAGGCTCGCCATGCTATG +
Preference number: 5 (lower is better)
Translates to: VALFDGIQHGPPTIP*LSGFPYAVEARHAM
Trigger: CATAGCATGGCGAGCCTCAACTGCATACGGAAATCCACTAAGCCATGGAATGGTGGGAGGTCCATGCTGGATACCATCAAAAAGGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp CTCCCCCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACTGCAGGATGTCATCGTaGAGGCTCAGGTCGGATACC +
Preference number: 5 (lower is better)
Translates to: LPQLLLTESVCLTPQSFYCRMSS*RLRSDT
Trigger: GGTATCCGACCTGAGCCTCAACGATGACATCCTGCA...GTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp CTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTACTCCCGTGTATTTCTGATTGTCCTTaGCAGACGGAAAGATTTGCC +
Preference number: 5 (lower is better)
Translates to: LLWQKGADRELGVLVLPCISDCP*QTERFA
Trigger: GGCAAATCTTTCCGTCTGCAAAGGACAATCAGAAAT...ACACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp CTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATTGCCTGCCATCAGGGGCTaGGTAAATCTCATATTTAAA +
Preference number: 5 (lower is better)
Translates to: LRGYQMPEWGGPLLWVGLPAIRG*VNLIFK
Trigger: TTTAAATATGAGATTTACCAAGCCCCTGATGGCAGG...CAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp CTGCTCTGGCAGAAAGGTGCTGACCGAGAGCTGGGTGTTCTGGTACTCCCGTGTCCTGCCATCAGGGGCTaGGTAAATCTCATATTTAAA +
Preference number: 5 (lower is better)
Translates to: LLWQKGADRELGVLVLPCPAIRG*VNLIFK
Trigger: TTTAAATATGAGATTTACCAAGCCCCTGATGGCAGG...ACACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS-3UTR CAA 90 bp AATAGGACTTTGTATTTCTCCATGATCACAGAACCAGGCTCTCAGCTCCCTGATGCGAAGCTGTGCAGCTaGAGGGATTTGCCGTCGGCC +
Preference number: 5 (lower is better)
Translates to: NRTLYFSMITEPGSQLPDAKLCS*RDLPSA
Trigger: GGCCGACGGCAAATCCCTCAAGCTGCACAGCTTCGC...ATCAGGGAGCTGAGAGCCTGGTTCTGTGATCATGGAGAAATACAAAGTCCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp CACCTAAGGCGCAAGGCAAGGCTTCCTCCTACCCAAATAAACATGGTCTCTTTTCCTCTACCTGGCCTTTaGTTCCACCACCTCACCTGG +
Preference number: 5 (lower is better)
Translates to: HLRRKARLPPTQINMVSFPLPGL*FHHLTW
Trigger: CCAGGTGAGGTGGTGGAACAAAAGGCCAGGTAGAGG...AAAAGAGACCATGTTTATTTGGGTAGGAGGAAGCCTTGCCTTGCGCCTTAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp TTGACCATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTGATAGGCCTTTACTTTaGGGGCTACAAGCAACTTCC +
Preference number: 5 (lower is better)
Translates to: LTIQGRAPNVLMENKACSDRPLL*GLQATS
Trigger: GGAAGTTGCTTGTAGCCCCAAAAGTAAAGGCCTATC...AGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAATGGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS GCA 90 bp AGGGGCTTGGTAAATCTCATATTTAAAGCCCAGAGCCTTGGCCAGTaGATCCAGGACATCTATGGAGAACCCTTTGTAGCGCTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: RGLVNLIFKAQSLGQ*IQDIYGEPFVALGL
Trigger: CAGCCCAAGCGCTACAAAGGGTTCTCCATAGATGTCCTGGATGCACTGGCCAAGGCTCTGGGCTTTAAATATGAGATTTACCAAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS GCA 90 bp CCTGTTCAACACAAATATCAGCACACCAACCACAGGGATGGCTGCTaGAATGCAGGCCCACACAGCGAAATCAAATGGAGCAAAGAGGGA +
Preference number: 5 (lower is better)
Translates to: PVQHKYQHTNHRDGC*NAGPHSEIKWSKEG
Trigger: TCCCTCTTTGCTCCATTTGATTTCGCTGTGTGGGCCTGCATTGCAGCAGCCATCCCTGTGGTTGGTGTGCTGATATTTGTGTTGAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp CCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACTCCCTTGCAGACGGAAAGATTaGCCGGACCACGGTCATCCT +
Preference number: 5 (lower is better)
Translates to: PTLTNRVRLPDTTKLLLPCRRKD*PDHGHP
Trigger: AGGATGACCGTGGTCCGGCAAATCTTTCCGTCTGCA...AGGGAGTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp GACTCCAGGTCTGGTCTGGAGAGGGTCGTAAAGGTGGAAGGGAGAGTTTGTGCTAGCAGAATACTTCTCTaGAAGATGCTGGTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: DSRSGLERVVKVEGRVCASRILL*KMLVSL
Trigger: GAGAGAGACCAGCATCTTCAAGAGAAGTATTCTGCT...AGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACCTGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS GCA 90 bp TCAACACAAATATCAGCACACCAACCACAGGGATGGCTGCTGCAATaGAGGCCCACACAGCGAAATCAAATGGAGCAAAGAGGGAGAAGA +
Preference number: 5 (lower is better)
Translates to: STQISAHQPQGWLLQ*RPTQRNQMEQRGRR
Trigger: TCTTCTCCCTCTTTGCTCCATTTGATTTCGCTGTGTGGGCCTGCATTGCAGCAGCCATCCCTGTGGTTGGTGTGCTGATATTTGTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS GCA 90 bp TGCCCTTGGCTCGGAAGTACTCATATACAGCAGAATCCCGGACAGTaGCATAAGACATTTCCACTTGTTTGGACAGGTCCTGGAAAGTCC +
Preference number: 5 (lower is better)
Translates to: CPWLGSTHIQQNPGQ*HKTFPLVWTGPGKS
Trigger: GGACTTTCCAGGACCTGTCCAAACAAGTGGAAATGTCTTATGGCACTGTCCGGGATTCTGCTGTATATGAGTACTTCCGAGCCAAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 90 bp CCTGTATCCTGTTCAACACAAATATCAGCACACCAACCACAGGGATaGCTGCTGCAATGCAGGCCCACACAGCGAAATCAAATGGAGCAA +
Preference number: 5 (lower is better)
Translates to: PVSCSTQISAHQPQG*LLQCRPTQRNQMEQ
Trigger: TTGCTCCATTTGATTTCGCTGTGTGGGCCTGCATTGCAGCAGCCATCCCTGTGGTTGGTGTGCTGATATTTGTGTTGAACAGGATACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp AATAGGACTTTGTATTTCTCCATGATCACAGAACCAGGCTCTCAGCTCCCTGATGCCAAGTCTGCTCTCTaGCTGATGAGCTCCCCGATC +
Preference number: 5 (lower is better)
Translates to: NRTLYFSMITEPGSQLPDAKSAL*LMSSPI
Trigger: GATCGGGGAGCTCATCAGCAAGAGAGCAGACTTGGC...ATCAGGGAGCTGAGAGCCTGGTTCTGTGATCATGGAGAAATACAAAGTCCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp CTCAGAGGTTATCAGATGCCTGAGTGGGGAGGGCCCCTGCTCTGGGTTGGATTGGCAATCAATAGGACTTaGTATTTCTCCATGATCACA +
Preference number: 5 (lower is better)
Translates to: LRGYQMPEWGGPLLWVGLAINRT*YFSMIT
Trigger: TGTGATCATGGAGAAATACAAAGTCCTATTGATTGC...CAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS CCA 90 bp TTCAGCTCCTCTGTCTTCATCGTGGTGAAGAGGCTGGTGAATACGTaGCTAATGTTCTTGTCCACCTTTTGTAAAGAGACGTCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: FSSSVFIVVKRLVNT*LMFLSTFCKETSRP
Trigger: GGGCCTTGACGTCTCTTTACAAAAGGTGGACAAGAACATTAGCCACGTATTCACCAGCCTCTTCACCACGATGAAGACAGAGGAGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp CTCCCCCAACTCTTACTAACAGAGTCCGTTTGCCTGACACCACAAAGCTTCTACCTGGTCCAGAAAGCTTaGAAGCCCACGGATATCATA +
Preference number: 5 (lower is better)
Translates to: LPQLLLTESVCLTPQSFYLVQKA*KPTDII
Trigger: TATGATATCCGTGGGCTTCAAAGCTTTCTGGACCAG...GTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATTCCCATGTCGCCAACTaGCGCATGTCTTTGCCAAAA +
Preference number: 5 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHSHVAN*RMSLPK
Trigger: TTTTGGCAAAGACATGCGCAAGTTGGCGACATGGGA...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATAAAGTCCTTATGGGGTaGTCCATCCTGGACACTGTG +
Preference number: 5 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHKVLMG*SILDTV
Trigger: CACAGTGTCCAGGATGGACAACCCCATAAGGACTTT...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp AATAGGACTTTGTATTTCTCCATGATCACAGAACCAGGCTCTCAGCTCCCTGATGATTTCCGTATGCAGTaGAGGCTCGCCATGCTATGC +
Preference number: 5 (lower is better)
Translates to: NRTLYFSMITEPGSQLPDDFRMQ*RLAMLC
Trigger: GCATAGCATGGCGAGCCTCAACTGCATACGGAAATC...ATCAGGGAGCTGAGAGCCTGGTTCTGTGATCATGGAGAAATACAAAGTCCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp CTAAGCAGAACCATCCAAGAAGACATCCAAGCTATACCCCAGAAGACAGGCCATGACATTTCCACTTGTTaGGACAGGTCCTGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: LSRTIQEDIQAIPQKTGHDISTC*DRSWKV
Trigger: GACTTTCCAGGACCTGTCCAAACAAGTGGAAATGTC...ATGGCCTGTCTTCTGGGGTATAGCTTGGATGTCTTCTTGGATGGTTCTGCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp TTGACCATTCAGGGCAGGGCCCCCAACGTGCTGATGGAAAACAAAGCCTGCTCTAATGCTGATTATTATTaGCAGTGTCTGAAGGCACAA +
Preference number: 5 (lower is better)
Translates to: LTIQGRAPNVLMENKACSNADYY*QCLKAQ
Trigger: TTGTGCCTTCAGACACTGCAAATAATAATCAGCATT...AGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAATGGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp CATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAGTGTACTTCTTTGTCCTCCTaGGGGGTCTCCTGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: HMYKKNERVSVYVCVCECTSLSS*GVSWWH
Trigger: GTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGT...ACACTCGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp CATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAGTGTACAGCCTGGAATGGGTaGTTGGCCTCGATGACCTTG +
Preference number: 5 (lower is better)
Translates to: HMYKKNERVSVYVCVCECTAWNG*LASMTL
Trigger: CAAGGTCATCGAGGCCAACAACCCATTCCAGGCTGT...ACACTCGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp CACCTAAGGCGCAAGGCAAGGCTTCCTCCTACCCAAATAAACATGGTCTCTTTTATAAGACATTTCCACTaGTTTGGACAGGTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: HLRRKARLPPTQINMVSFIRHFH*FGQVLE
Trigger: TTCCAGGACCTGTCCAAACAAGTGGAAATGTCTTAT...AAAAGAGACCATGTTTATTTGGGTAGGAGGAAGCCTTGCCTTGCGCCTTAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS-3UTR CAA 90 bp CATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAGTGTTTGGGTGACCTGTGTTaGCACTGCATGGAGGGCATG +
Preference number: 5 (lower is better)
Translates to: HMYKKNERVSVYVCVCECLGDLC*HCMEGM
Trigger: CATGCCCTCCATGCAGTGCAAACACAGGTCACCCAA...ACACTCGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGTTAAAGCCCAGAGCCTaGGCCAGTGCATCCAGGACA +
Preference number: 5 (lower is better)
Translates to: LHICTRKMKESLCMCVCALKPRA*ASASRT
Trigger: TGTCCTGGATGCACTGGCCAAGGCTCTGGGCTTTAA...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp CATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGAGTGTCTGGTCCAGAAAGCTTaGAAGCCCACGGATATCATA +
Preference number: 5 (lower is better)
Translates to: HMYKKNERVSVYVCVCECLVQKA*KPTDII
Trigger: TATGATATCCGTGGGCTTCAAAGCTTTCTGGACCAG...ACACTCGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS-3UTR CAA 90 bp TTACACATATGTACAAGAAAAATGAAAGAGTCTCTGTGTATGTGTGTGTGTGCGACGTGGCTAATGTTCTaGTCCACCTTTTGTAAAGAG +
Preference number: 5 (lower is better)
Translates to: LHICTRKMKESLCMCVCATWLMF*STFCKE
Trigger: CTCTTTACAAAAGGTGGACAAGAACATTAGCCACGT...CGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp CAGCCCAGCGCGGTCGGGCTCCCGCTCCGGCTCCGGTaGCGGCTGCGGCGGTGCTGGCAGCTTGAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: QPSAVGLPLRLR*RLRRCWQLEPR
Trigger: CCTGGGCTCAAGCTGCCAGCACCGCCGCAGCCGCCACCGGAGCCGGAGCGGGAGCCCGACCGCGCTGGGCTG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS TCA 72 bp GGGATTTGCCGTCGGCCTGGGCGCTGGCATGGCTGGTaGGGTCACAGCGGCCCATGTGCGGCCACCACTTCT +
Preference number: 6 (lower is better)
Translates to: GICRRPGRWHGW*GHSGPCAATTS
Trigger: AGAAGTGGTGGCCGCACATGGGCCGCTGTGACCTCACCAGCCATGCCAGCGCCCAGGCCGACGGCAAATCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS GCA 72 bp CCTCACCATCGGGGCTGGGGTTCAGGTGGCATGCGGTaGGTGGCGACCCTCCCGGGTTGCGCTGGACAAAGA +
Preference number: 6 (lower is better)
Translates to: PHHRGWGSGGMR*VATLPGCAGQR
Trigger: TCTTTGTCCAGCGCAACCCGGGAGGGTCGCCACGCACCGCATGCCACCTGAACCCCAGCCCCGATGGTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp ACCATCGGGGCTGGGGTTCAGGTGGCATGCGGTGCGTaGCGACCCTCCCGGGTTGCGCTGGACAAAGAGGTG +
Preference number: 6 (lower is better)
Translates to: TIGAGVQVACGA*RPSRVALDKEV
Trigger: CACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGCCACGCACCGCATGCCACCTGAACCCCAGCCCCGATGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp AGCTTGAGGGATTTGCCGTCGGCCTGGGCGCTGGCATaGCTGGTGAGGTCACAGCGGCCCATGTGCGGCCAC +
Preference number: 6 (lower is better)
Translates to: SLRDLPSAWALA*LVRSQRPMCGH
Trigger: GTGGCCGCACATGGGCCGCTGTGACCTCACCAGCCATGCCAGCGCCCAGGCCGACGGCAAATCCCTCAAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp GCGAAGCTGTGCAGCTTGAGGGATTTGCCGTCGGCCTaGGCGCTGGCATGGCTGGTGAGGTCACAGCGGCCC +
Preference number: 6 (lower is better)
Translates to: AKLCSLRDLPSA*ALAWLVRSQRP
Trigger: GGGCCGCTGTGACCTCACCAGCCATGCCAGCGCCCAGGCCGACGGCAAATCCCTCAAGCTGCACAGCTTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 90 bp GGGCTGGGGTTCAGGTGGCATGCGGTGCGTGGCGACCCTCCCGGGTaGCGCTGGACAAAGAGGTGTGGGATGTGCATGGCATCCGTGAGG +
Preference number: 6 (lower is better)
Translates to: GLGFRWHAVRGDPPG*RWTKRCGMCMASVR
Trigger: CCTCACGGATGCCATGCACATCCCACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGCCACGCACCGCATGCCACCTGAACCCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp GTCTCGAAGCCAGTGTGTAGGCCTCACCATCGGGGCTaGGGTTCAGGTGGCATGCGGTGCGTGGCGACCCTC +
Preference number: 6 (lower is better)
Translates to: VSKPVCRPHHRG*GSGGMRCVATL
Trigger: GAGGGTCGCCACGCACCGCATGCCACCTGAACCCCAGCCCCGATGGTGAGGCCTACACACTGGCTTCGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp GCCAGGTTGGTCTCCACGGCCTCGTTGATGAAGGAGTaGGCTCCCTGTGGGCTGAGCAGCAGGATGGCGCGG +
Preference number: 6 (lower is better)
Translates to: ARLVSTASLMKE*APCGLSSRMAR
Trigger: CCGCGCCATCCTGCTGCTCAGCCCACAGGGAGCCCACTCCTTCATCAACGAGGCCGTGGAGACCAACCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp TGGCGACCCTCCCGGGTTGCGCTGGACAAAGAGGTGTaGGATGTGCATGGCATCCGTGAGGGACTGCAGGGC +
Preference number: 6 (lower is better)
Translates to: WRPSRVALDKEV*DVHGIREGLQG
Trigger: GCCCTGCAGTCCCTCACGGATGCCATGCACATCCCACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp TGGCATGCGGTGCGTGGCGACCCTCCCGGGTTGCGCTaGACAAAGAGGTGTGGGATGTGCATGGCATCCGTG +
Preference number: 6 (lower is better)
Translates to: WHAVRGDPPGLR*TKRCGMCMASV
Trigger: CACGGATGCCATGCACATCCCACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGCCACGCACCGCATGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS GCA 72 bp TCAGGTGGCATGCGGTGCGTGGCGACCCTCCCGGGTTaGGCTGGACAAAGAGGTGTGGGATGTGCATGGCAT +
Preference number: 6 (lower is better)
Translates to: SGGMRCVATLPG*AGQRGVGCAWH
Trigger: ATGCCATGCACATCCCACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGCCACGCACCGCATGCCACCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp AGATGGCGCTGTGCAGAGTGGCAGAAGCTGACGGCCTaGGCTGGGCAGCACTCTGAGCCCTCACAGCCTGTA +
Preference number: 6 (lower is better)
Translates to: RWRCAEWQKLTA*AGQHSEPSQPV
Trigger: TACAGGCTGTGAGGGCTCAGAGTGCTGCCCAGCCCAGGCCGTCAGCTTCTGCCACTCTGCACAGCGCCATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 72 bp TTCAGGTGGCATGCGGTGCGTGGCGACCCTCCCGGGTaGCGCTGGACAAAGAGGTGTGGGATGTGCATGGCA +
Preference number: 6 (lower is better)
Translates to: FRWHAVRGDPPG*RWTKRCGMCMA
Trigger: TGCCATGCACATCCCACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGCCACGCACCGCATGCCACCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS GCA 72 bp CCTCCCGGGTTGCGCTGGACAAAGAGGTGTGGGATGTaGATGGCATCCGTGAGGGACTGCAGGGCATTGGCA +
Preference number: 6 (lower is better)
Translates to: PPGLRWTKRCGM*MASVRDCRALA
Trigger: TGCCAATGCCCTGCAGTCCCTCACGGATGCCATGCACATCCCACACCTCTTTGTCCAGCGCAACCCGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp ATGTGGATGATGGAGTCGGCCCGCACCGACACGCACTaGCATATCCAGGGGAGAAGCCACAGCGTCAGCGCT +
Preference number: 6 (lower is better)
Translates to: MWMMESARTDTH*HIQGRSHSVSA
Trigger: AGCGCTGACGCTGTGGCTTCTCCCCTGGATATGCCAGTGCGTGTCGGTGCGGGCCGACTCCATCATCCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS GCA 72 bp CTGATGGTCCGCCAGAGTTCAGCAAACGTGCTGTCCTaGTCCAGGGGGTTGGTGCCCTTGGCTCGGAAGTAC +
Preference number: 6 (lower is better)
Translates to: LMVRQSSANVLS*SRGLVPLARKY
Trigger: GTACTTCCGAGCCAAGGGCACCAACCCCCTGGAGCAGGACAGCACGTTTGCTGAACTCTGGCGGACCATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS GCA 72 bp GATGACAGTCACCGAGCAGTCGTCATCCGTCAGGGCTaGGTATTCCACCACGGCCACATCCCACAGGAAGGC +
Preference number: 6 (lower is better)
Translates to: DDSHRAVVIRQG*VFHHGHIPQEG
Trigger: GCCTTCCTGTGGGATGTGGCCGTGGTGGAATACGCAGCCCTGACGGATGACGACTGCTCGGTGACTGTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS CCA 72 bp CACCAGCCTGAGCATGACATCATTGAGGCGGACGGGTaGTCTCGAAGCCAGTGTGTAGGCCTCACCATCGGG +
Preference number: 6 (lower is better)
Translates to: HQPEHDIIEADG*SRSQCVGLTIG
Trigger: CCCGATGGTGAGGCCTACACACTGGCTTCGAGACCACCCGTCCGCCTCAATGATGTCATGCTCAGGCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp AGGCTCCATAGACAATCCAGATGGCGCTGTGCAGAGTaGCAGAAGCTGACGGCCTGGGCTGGGCAGCACTCT +
Preference number: 6 (lower is better)
Translates to: RLHRQSRWRCAE*QKLTAWAGQHS
Trigger: AGAGTGCTGCCCAGCCCAGGCCGTCAGCTTCTGCCACTCTGCACAGCGCCATCTGGATTGTCTATGGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 72 bp AGGTCGGATACCGCCAACTGGAACACCCTGTCGTCCTaGGCCGCGTTCTCCTCGAAGATGGCACCGATGTGG +
Preference number: 6 (lower is better)
Translates to: RSDTANWNTLSS*AAFSSKMAPMW
Trigger: CCACATCGGTGCCATCTTCGAGGAGAACGCGGCCAAGGACGACAGGGTGTTCCAGTTGGCGGTATCCGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS GCA 72 bp CATGGCATCCGTGAGGGACTGCAGGGCATTGGCAGATaGACAGCCAGTGGACGTGACCAAGGCCAAAATCCC +
Preference number: 6 (lower is better)
Translates to: HGIREGLQGIGR*TASGRDQGQNP
Trigger: GGGATTTTGGCCTTGGTCACGTCCACTGGCTGTGCATCTGCCAATGCCCTGCAGTCCCTCACGGATGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp ATGTCATCGTTGAGGCTCAGGTCGGATACCGCCAACTaGAACACCCTGTCGTCCTTGGCCGCGTTCTCCTCG +
Preference number: 6 (lower is better)
Translates to: MSSLRLRSDTAN*NTLSSLAAFSS
Trigger: CGAGGAGAACGCGGCCAAGGACGACAGGGTGTTCCAGTTGGCGGTATCCGACCTGAGCCTCAACGATGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp GGACCTGCTCCAAGTTCACTTCTTTGTCCCTACAGGTaGTCTCTCCAGGTCAGGGTGGAGGCACATGGGCGG +
Preference number: 6 (lower is better)
Translates to: GPAPSSLLCPYR*SLQVRVEAHGR
Trigger: CCGCCCATGTGCCTCCACCCTGACCTGGAGAGACCACCTGTAGGGACAAAGAAGTGAACTTGGAGCAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552278.2
CDS CAA 72 bp GCCTTCCTGATGCCTTCTGAAGGACTGGACACGCAGTaGTCAGCCCCTCCGTTCTTGCTGATGGTCCGCCAG +
Preference number: 6 (lower is better)
Translates to: AFLMPSEGLDTQ*SAPPFLLMVRQ
Trigger: CTGGCGGACCATCAGCAAGAACGGAGGGGCTGACAACTGCGTGTCCAGTCCTTCAGAAGGCATCAGGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327946.12
CDS CAA 90 bp TTGAGGCTCAGGTCGGATACCGCCAACTGGAACACCCTGTCGTCCTaGGCCGCGTTCTCCTCGAAGATGGCACCGATGTGGATGATGGAG +
Preference number: 6 (lower is better)
Translates to: LRLRSDTANWNTLSS*AAFSSKMAPMWMME
Trigger: CTCCATCATCCACATCGGTGCCATCTTCGAGGAGAACGCGGCCAAGGACGACAGGGTGTTCCAGTTGGCGGTATCCGACCTGAGCCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 90 bp AAGAGGTGTGGGATGTGCATGGCATCCGTGAGGGACTGCAGGGCATaGGCAGATGCACAGCCAGTGGACGTGACCAAGGCCAAAATCCCC +
Preference number: 6 (lower is better)
Translates to: KRCGMCMASVRDCRA*ADAQPVDVTKAKIP
Trigger: GGGGATTTTGGCCTTGGTCACGTCCACTGGCTGTGCATCTGCCAATGCCCTGCAGTCCCTCACGGATGCCATGCACATCCCACACCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 90 bp ATGGTCCGCCAGAGTTCAGCAAACGTGCTGTCCTGCTCCAGGGGGTaGGTGCCCTTGGCTCGGAAGTACTCATATACAGCAGAATCCCGG +
Preference number: 6 (lower is better)
Translates to: MVRQSSANVLSCSRG*VPLARKYSYTAESR
Trigger: CCGGGATTCTGCTGTATATGAGTACTTCCGAGCCAAGGGCACCAACCCCCTGGAGCAGGACAGCACGTTTGCTGAACTCTGGCGGACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 90 bp ATGCCTTCTGAAGGACTGGACACGCAGTTGTCAGCCCCTCCGTTCTaGCTGATGGTCCGCCAGAGTTCAGCAAACGTGCTGTCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: MPSEGLDTQLSAPPF*LMVRQSSANVLSCS
Trigger: GGAGCAGGACAGCACGTTTGCTGAACTCTGGCGGACCATCAGCAAGAACGGAGGGGCTGACAACTGCGTGTCCAGTCCTTCAGAAGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 90 bp GCTCCAGGATCCTTCCTGATGCCTTCTGAAGGACTGGACACGCAGTaGTCAGCCCCTCCGTTCTTGCTGATGGTCCGCCAGAGTTCAGCA +
Preference number: 6 (lower is better)
Translates to: APGSFLMPSEGLDTQ*SAPPFLLMVRQSSA
Trigger: TGCTGAACTCTGGCGGACCATCAGCAAGAACGGAGGGGCTGACAACTGCGTGTCCAGTCCTTCAGAAGGCATCAGGAAGGATCCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS CAA 90 bp ATGAGGCTGTTCATGCGCCGGTGGACCTGCTCCAAGTTCACTTCTTaGTCCCTACAGGTGGTCTCTCCAGGTCAGGGTGGAGGCACATGG +
Preference number: 6 (lower is better)
Translates to: MRLFMRRWTCSKFTS*SLQVVSPGQGGGTW
Trigger: CCATGTGCCTCCACCCTGACCTGGAGAGACCACCTGTAGGGACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552278.2
CDS TCA 72 bp GACTGGACACGCAGTTGTCAGCCCCTCCGTTCTTGCTaGTGGTCCGCCAGAGTTCAGCAAACGTGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: DWTRSCQPLRSC*WSARVQQTCCP
Trigger: AGGACAGCACGTTTGCTGAACTCTGGCGGACCATCAGCAAGAACGGAGGGGCTGACAACTGCGTGTCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp GTACCGCTTGCTGAAGTCCACAACGCTCTCCCTCTCTaGGGTGATGGTGATGGCAGAGATGGCCAAGTCTGC +
Preference number: 6 (lower is better)
Translates to: VPLAEVHNALPL*GDGDGRDGQVC
Trigger: GCAGACTTGGCCATCTCTGCCATCACCATCACCCCAGAGAGGGAGAGCGTTGTGGACTTCAGCAAGCGGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp AGAGCCACCAGCTGCCCATCACGATGCGCATGGCCATaGAGTTCACGGAAGATTCGCCACCTTGCTGTACGA +
Preference number: 6 (lower is better)
Translates to: RATSCPSRCAWP*SSRKIRHLAVR
Trigger: TCGTACAGCAAGGTGGCGAATCTTCCGTGAACTCCATGGCCATGCGCATCGTGATGGGCAGCTGGTGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 72 bp GCAAACGTGCTGTCCTGCTCCAGGGGGTTGGTGCCCTaGGCTCGGAAGTACTCATATACAGCAGAATCCCGG +
Preference number: 6 (lower is better)
Translates to: ANVLSCSRGLVP*ARKYSYTAESR
Trigger: CCGGGATTCTGCTGTATATGAGTACTTCCGAGCCAAGGGCACCAACCCCCTGGAGCAGGACAGCACGTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 72 bp GAAGGACTGGACACGCAGTTGTCAGCCCCTCCGTTCTaGCTGATGGTCCGCCAGAGTTCAGCAAACGTGCTG +
Preference number: 6 (lower is better)
Translates to: EGLDTQLSAPPF*LMVRQSSANVL
Trigger: CAGCACGTTTGCTGAACTCTGGCGGACCATCAGCAAGAACGGAGGGGCTGACAACTGCGTGTCCAGTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 72 bp TCCTTCCTGATGCCTTCTGAAGGACTGGACACGCAGTaGTCAGCCCCTCCGTTCTTGCTGATGGTCCGCCAG +
Preference number: 6 (lower is better)
Translates to: SFLMPSEGLDTQ*SAPPFLLMVRQ
Trigger: CTGGCGGACCATCAGCAAGAACGGAGGGGCTGACAACTGCGTGTCCAGTCCTTCAGAAGGCATCAGGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464741.2
CDS CAA 90 bp CAGAGTTCAGCAAACGTGCTGTCCTGCTCCAGGGGGTTGGTGCCCTaGGCTCGGAAGTACTCATATACAGCAGAATCCCGGACAGTGCCA +
Preference number: 6 (lower is better)
Translates to: QSSANVLSCSRGLVP*ARKYSYTAESRTVP
Trigger: TGGCACTGTCCGGGATTCTGCTGTATATGAGTACTTCCGAGCCAAGGGCACCAACCCCCTGGAGCAGGACAGCACGTTTGCTGAACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS TCA 72 bp GAAGCCCACGGATATCATACTCGCTGTCGTAGAACATaGCGAACTTCTGCCAGCGCAGCTCCGTCACCAGCC +
Preference number: 6 (lower is better)
Translates to: EAHGYHTRCRRT*RTSASAAPSPA
Trigger: GGCTGGTGACGGAGCTGCGCTGGCAGAAGTTCGTCATGTTCTACGACAGCGAGTATGATATCCGTGGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS TCA 72 bp GGGCCTCTCTTGCAAGCTGCCATTCAAGCCCTTCTCTaGGTCCCATGTCGCCAACTTGCGCATGTCTTTGCC +
Preference number: 6 (lower is better)
Translates to: GPLLQAAIQALL*VPCRQLAHVFA
Trigger: GGCAAAGACATGCGCAAGTTGGCGACATGGGACTCAGAGAAGGGCTTGAATGGCAGCTTGCAAGAGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp TCCGGGTCACTGATTTCCTCATTCACAAAGACCCAGTaGCTGTCCTTGGAAGCCAGGTTGGTCTCCACGGCC +
Preference number: 6 (lower is better)
Translates to: SGSLISSFTKTQ*LSLEARLVSTA
Trigger: GGCCGTGGAGACCAACCTGGCTTCCAAGGACAGCCACTGGGTCTTTGTGAATGAGGAAATCAGTGACCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp AGCCCAGAGCCTTGGCCAGTGCATCCAGGACATCTATaGAGAACCCTTTGTAGCGCTTGGGCTGTCCTAGGA +
Preference number: 6 (lower is better)
Translates to: SPEPWPVHPGHL*RTLCSAWAVLG
Trigger: TCCTAGGACAGCCCAAGCGCTACAAAGGGTTCTCCATAGATGTCCTGGATGCACTGGCCAAGGCTCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp CAAACGTGCTGTCCTGCTCCAGGGGGTTGGTGCCCTTaGCTCGGAAGTACTCATATACAGCAGAATCCCGGA +
Preference number: 6 (lower is better)
Translates to: QTCCPAPGGWCP*LGSTHIQQNPG
Trigger: TCCGGGATTCTGCTGTATATGAGTACTTCCGAGCCAAGGGCACCAACCCCCTGGAGCAGGACAGCACGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 72 bp GTCAAGGCCCAGCCGCGAGGCCTGGTCCAGAAAGCTTaGAAGCCCACGGATATCATACTCGCTGTCGTAGAA +
Preference number: 6 (lower is better)
Translates to: VKAQPRGLVQKA*KPTDIILAVVE
Trigger: TTCTACGACAGCGAGTATGATATCCGTGGGCTTCAAAGCTTTCTGGACCAGGCCTCGCGGCTGGGCCTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp ATTTGCCGGACCACGGTCATCCTTCCAAGGGCACTATaGACCAGATCCAGGATCTCCGGGTCACTGATTTCC +
Preference number: 6 (lower is better)
Translates to: ICRTTVILPRAL*TRSRISGSLIS
Trigger: GGAAATCAGTGACCCGGAGATCCTGGATCTGGTCCATAGTGCCCTTGGAAGGATGACCGTGGTCCGGCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 72 bp CCACCATTCCATGGCTTAGTGGATTTCCGTATGCAGTaGAGGCTCGCCATGCTATGCCACTTCCGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: PPFHGLVDFRMQ*RLAMLCHFRSS
Trigger: GGAGGACCGGAAGTGGCATAGCATGGCGAGCCTCAACTGCATACGGAAATCCACTAAGCCATGGAATGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 90 bp GGGAGGAGATGCGGTGGTTGTTCCTCGTGCATTTCTGATTGTCCTTaGCAGACGGAAAGATTTGCCGGACCACGGTCATCCTTCCAAGGG +
Preference number: 6 (lower is better)
Translates to: GRRCGGCSSCISDCP*QTERFAGPRSSFQG
Trigger: CCCTTGGAAGGATGACCGTGGTCCGGCAAATCTTTCCGTCTGCAAAGGACAATCAGAAATGCACGAGGAACAACCACCGCATCTCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS GCA 72 bp GTTCAGCAAACGTGCTGTCCTGCTCCAGGGGGTTGGTaGCCTTGGCTCGGAAGTACTCATATACAGCAGAAT +
Preference number: 6 (lower is better)
Translates to: VQQTCCPAPGGW*PWLGSTHIQQN
Trigger: ATTCTGCTGTATATGAGTACTTCCGAGCCAAGGGCACCAACCCCCTGGAGCAGGACAGCACGTTTGCTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS GCA 72 bp TCTTCATCCATGAGGCTGTTCATGCGCCGGTGGACCTaGTCCAAGTTCACTTCTTTGTCCCTACAGGTGGTC +
Preference number: 6 (lower is better)
Translates to: SSSMRLFMRRWT*SKFTSLSLQVV
Trigger: GACCACCTGTAGGGACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTCATGGATGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552278.2
CDS CCA 72 bp TCTTCCAAGACAGTCACCACTTTAAGAGTCAATCCTTaGAGGCGGCTGCCCATGGGCCTCTCTTGCAAGCTG +
Preference number: 6 (lower is better)
Translates to: SSKTVTTLRVNP*RRLPMGLSCKL
Trigger: CAGCTTGCAAGAGAGGCCCATGGGCAGCCGCCTCCAAGGATTGACTCTTAAAGTGGTGACTGTCTTGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 72 bp CTCTTCCAAGACAGTCACCACTTTAAGAGTCAATCCTaGGAGGCGGCTGCCCATGGGCCTCTCTTGCAAGCT +
Preference number: 6 (lower is better)
Translates to: LFQDSHHFKSQS*EAAAHGPLLQA
Trigger: AGCTTGCAAGAGAGGCCCATGGGCAGCCGCCTCCAAGGATTGACTCTTAAAGTGGTGACTGTCTTGGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 90 bp GTCTTCATCGTGGTGAAGAGGCTGGTGAATACGTGGCTAATGTTCTaGTCCACCTTTTGTAAAGAGACGTCAAGGCCCAGCCGCGAGGCC +
Preference number: 6 (lower is better)
Translates to: VFIVVKRLVNTWLMF*STFCKETSRPSREA
Trigger: GGCCTCGCGGCTGGGCCTTGACGTCTCTTTACAAAAGGTGGACAAGAACATTAGCCACGTATTCACCAGCCTCTTCACCACGATGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 90 bp CACGAAAGGCTCTTCCAAGACAGTCACCACTTTAAGAGTCAATCCTaGGAGGCGGCTGCCCATGGGCCTCTCTTGCAAGCTGCCATTCAA +
Preference number: 6 (lower is better)
Translates to: HERLFQDSHHFKSQS*EAAAHGPLLQAAIQ
Trigger: TTGAATGGCAGCTTGCAAGAGAGGCCCATGGGCAGCCGCCTCCAAGGATTGACTCTTAAAGTGGTGACTGTCTTGGAAGAGCCTTTCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 90 bp CCAGGAGGTGTTATGGAGCTGGTGACCGTACCTGCCATCAGGGGCTaGGTAAATCTCATATTTAAAGCCCAGAGCCTTGGCCAGTGCATC +
Preference number: 6 (lower is better)
Translates to: PGGVMELVTVPAIRG*VNLIFKAQSLGQCI
Trigger: GATGCACTGGCCAAGGCTCTGGGCTTTAAATATGAGATTTACCAAGCCCCTGATGGCAGGTACGGTCACCAGCTCCATAACACCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS TCA 72 bp AGGGAGGAGATGCGGTGGTTGTTCCTCGTGCATTTCTaGTTGTCCTTTGCAGACGGAAAGATTTGCCGGACC +
Preference number: 6 (lower is better)
Translates to: REEMRWLFLVHF*LSFADGKICRT
Trigger: GGTCCGGCAAATCTTTCCGTCTGCAAAGGACAATCAGAAATGCACGAGGAACAACCACCGCATCTCCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS GCA 72 bp GCGGTGGTTGTTCCTCGTGCATTTCTGATTGTCCTTTaGAGACGGAAAGATTTGCCGGACCACGGTCATCCT +
Preference number: 6 (lower is better)
Translates to: AVVVPRAFLIVL*RRKDLPDHGHP
Trigger: AGGATGACCGTGGTCCGGCAAATCTTTCCGTCTGCAAAGGACAATCAGAAATGCACGAGGAACAACCACCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp CATCCAGGACATCTATGGAGAACCCTTTGTAGCGCTTaGGCTGTCCTAGGATGTTCTCAGCCACCATCACGA +
Preference number: 6 (lower is better)
Translates to: HPGHLWRTLCSA*AVLGCSQPPSR
Trigger: TCGTGATGGTGGCTGAGAACATCCTAGGACAGCCCAAGCGCTACAAAGGGTTCTCCATAGATGTCCTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp GCAATGTCTTCATCCATGAGGCTGTTCATGCGCCGGTaGACCTGCTCCAAGTTCACTTCTTTGTCCCTACAG +
Preference number: 6 (lower is better)
Translates to: AMSSSMRLFMRR*TCSKFTSLSLQ
Trigger: CTGTAGGGACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTCATGGATGAAGACATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552278.2
CDS CAA 72 bp TGCGGTGGTTGTTCCTCGTGCATTTCTGATTGTCCTTaGCAGACGGAAAGATTTGCCGGACCACGGTCATCC +
Preference number: 6 (lower is better)
Translates to: CGGCSSCISDCP*QTERFAGPRSS
Trigger: GGATGACCGTGGTCCGGCAAATCTTTCCGTCTGCAAAGGACAATCAGAAATGCACGAGGAACAACCACCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 90 bp GTTGTTCCTCGTGCATTTCTGATTGTCCTTTGCAGACGGAAAGATTaGCCGGACCACGGTCATCCTTCCAAGGGCACTATGGACCAGATC +
Preference number: 6 (lower is better)
Translates to: VVPRAFLIVLCRRKD*PDHGHPSKGTMDQI
Trigger: GATCTGGTCCATAGTGCCCTTGGAAGGATGACCGTGGTCCGGCAAATCTTTCCGTCTGCAAAGGACAATCAGAAATGCACGAGGAACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS GCA 72 bp ATATCAGCACACCAACCACAGGGATGGCTGCTGCAATaGAGGCCCACACAGCGAAATCAAATGGAGCAAAGA +
Preference number: 6 (lower is better)
Translates to: ISAHQPQGWLLQ*RPTQRNQMEQR
Trigger: TCTTTGCTCCATTTGATTTCGCTGTGTGGGCCTGCATTGCAGCAGCCATCCCTGTGGTTGGTGTGCTGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp TTTGATGGTATCCAGCATGGACCTCCCACCATTCCATaGCTTAGTGGATTTCCGTATGCAGTTGAGGCTCGC +
Preference number: 6 (lower is better)
Translates to: FDGIQHGPPTIP*LSGFPYAVEAR
Trigger: GCGAGCCTCAACTGCATACGGAAATCCACTAAGCCATGGAATGGTGGGAGGTCCATGCTGGATACCATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 72 bp CGTGCATTTCTGATTGTCCTTTGCAGACGGAAAGATTaGCCGGACCACGGTCATCCTTCCAAGGGCACTATG +
Preference number: 6 (lower is better)
Translates to: RAFLIVLCRRKD*PDHGHPSKGTM
Trigger: CATAGTGCCCTTGGAAGGATGACCGTGGTCCGGCAAATCTTTCCGTCTGCAAAGGACAATCAGAAATGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 72 bp GTTATGGAGCTGGTGACCGTACCTGCCATCAGGGGCTaGGTAAATCTCATATTTAAAGCCCAGAGCCTTGGC +
Preference number: 6 (lower is better)
Translates to: VMELVTVPAIRG*VNLIFKAQSLG
Trigger: GCCAAGGCTCTGGGCTTTAAATATGAGATTTACCAAGCCCCTGATGGCAGGTACGGTCACCAGCTCCATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 72 bp GTGGTGAAGAGGCTGGTGAATACGTGGCTAATGTTCTaGTCCACCTTTTGTAAAGAGACGTCAAGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: VVKRLVNTWLMF*STFCKETSRPS
Trigger: GCTGGGCCTTGACGTCTCTTTACAAAAGGTGGACAAGAACATTAGCCACGTATTCACCAGCCTCTTCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp AATCCCGGACAGTGCCATAAGACATTTCCACTTGTTTaGACAGGTCCTGGAAAGTCCTTATGGGGTTGTCCA +
Preference number: 6 (lower is better)
Translates to: NPGQCHKTFPLV*TGPGKSLWGCP
Trigger: TGGACAACCCCATAAGGACTTTCCAGGACCTGTCCAAACAAGTGGAAATGTCTTATGGCACTGTCCGGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 72 bp AGCAGAATCCCGGACAGTGCCATAAGACATTTCCACTaGTTTGGACAGGTCCTGGAAAGTCCTTATGGGGTT +
Preference number: 6 (lower is better)
Translates to: SRIPDSAIRHFH*FGQVLESPYGV
Trigger: AACCCCATAAGGACTTTCCAGGACCTGTCCAAACAAGTGGAAATGTCTTATGGCACTGTCCGGGATTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CAA 90 bp CTCATATACAGCAGAATCCCGGACAGTGCCATAAGACATTTCCACTaGTTTGGACAGGTCCTGGAAAGTCCTTATGGGGTTGTCCATCCT +
Preference number: 6 (lower is better)
Translates to: LIYSRIPDSAIRHFH*FGQVLESPYGVVHP
Trigger: AGGATGGACAACCCCATAAGGACTTTCCAGGACCTGTCCAAACAAGTGGAAATGTCTTATGGCACTGTCCGGGATTCTGCTGTATATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS GCA 72 bp GTAAATCTCATATTTAAAGCCCAGAGCCTTGGCCAGTaGATCCAGGACATCTATGGAGAACCCTTTGTAGCG +
Preference number: 6 (lower is better)
Translates to: VNLIFKAQSLGQ*IQDIYGEPFVA
Trigger: CGCTACAAAGGGTTCTCCATAGATGTCCTGGATGCACTGGCCAAGGCTCTGGGCTTTAAATATGAGATTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS GCA 72 bp CTCGGAAGTACTCATATACAGCAGAATCCCGGACAGTaGCATAAGACATTTCCACTTGTTTGGACAGGTCCT +
Preference number: 6 (lower is better)
Translates to: LGSTHIQQNPGQ*HKTFPLVWTGP
Trigger: AGGACCTGTCCAAACAAGTGGAAATGTCTTATGGCACTGTCCGGGATTCTGCTGTATATGAGTACTTCCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2
CDS CCA 72 bp TCTGTCTTCATCGTGGTGAAGAGGCTGGTGAATACGTaGCTAATGTTCTTGTCCACCTTTTGTAAAGAGACG +
Preference number: 6 (lower is better)
Translates to: SVFIVVKRLVNT*LMFLSTFCKET
Trigger: CGTCTCTTTACAAAAGGTGGACAAGAACATTAGCCACGTATTCACCAGCCTCTTCACCACGATGAAGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327946.12
ENST00000464741.2