RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRIA4 (Homo sapiens)

Ensembl gene IDs: ENSG00000152578

Ensembl transcript IDs: ENST00000282499.10, ENST00000393125.6, ENST00000393127.6, ENST00000428631.6, ENST00000525032.1, ENST00000525187.5, ENST00000525921.1, ENST00000525942.1, ENST00000527177.5, ENST00000527669.1, ENST00000527687.1, ENST00000530497.1, ENST00000531011.5, ENST00000531986.5, ENST00000533094.1

Found 679 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGGCCAGCGCGTTAGGACGGACTTCCCGCTCTCAGCCAAAGGATTaGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGT +
Preference number: 1 (lower is better)
Translates to: PASALGRTSRSQPKD*FSKDPRVACPSGLR
Trigger: ACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGAAGTCCGTCCTAACGCGCTGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR CCA 90 bp CTTCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTaGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGTTT +
Preference number: 1 (lower is better)
Translates to: LPALSQRIGLAKTRA*RVPQGCVSTSHQQF
Trigger: AAACTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR GCA 90 bp CCAAGCCCAAGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTaGTCAGGCTCAAGGCACTCGTCTTGTCCTTGCTTCCAGAGTCCT +
Preference number: 1 (lower is better)
Translates to: PSPSRQPECRRRLLH*SGSRHSSCPCFQSP
Trigger: AGGACTCTGGAAGCAAGGACAAGACGAGTGCCTTGAGCCTGAGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCTTGGGCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525942.1
3UTR CCA 90 bp TGCTCCATGTGCTGCTTTGGAGGTTCATTTGCTGACGGGAATAGCTaGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAG +
Preference number: 1 (lower is better)
Translates to: CSMCCFGGSFADGNS*IEVREVLEEISKRQ
Trigger: CTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCAGCTATTCCCGTCAGCAAATGAACCTCCAAAGCAGCACATGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR TCA 90 bp GTACAAGTTACTCAGGTAAAGAGGAGACAGGGAGGAGTTACGCACTaGGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTT +
Preference number: 1 (lower is better)
Translates to: VQVTQVKRRQGGVTH*GNSLCSAPCAALEV
Trigger: AACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCTGTCTCCTCTTTACCTGAGTAACTTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR GCA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTaGATGGCTTTGGGCCACTGCTCACTCATATGGCTCTTAACACCT +
Preference number: 1 (lower is better)
Translates to: SSPSNGIHSLNEPLM*MALGHCSLIWLLTP
Trigger: AGGTGTTAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR CCA 90 bp AATGAGCCACTGATGTGCATGGCTTTGGGCCACTGCTCACTCATATaGCTCTTAACACCTTCTCCTCCTGTTAAAACTCAACTCATCCTT +
Preference number: 1 (lower is better)
Translates to: NEPLMCMALGHCSLI*LLTPSPPVKTQLIL
Trigger: AAGGATGAGTTGAGTTTTAACAGGAGGAGAAGGTGTTAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCATGCACATCAGTGGCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR GCA 90 bp ATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTTTGGGCCACTaGTCACTCATATGGCTCTTAACACCTTCTCCTCCTGTTAAAACT +
Preference number: 1 (lower is better)
Translates to: IHSLNEPLMCMALGH*SLIWLLTPSPPVKT
Trigger: AGTTTTAACAGGAGGAGAAGGTGTTAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCATGCACATCAGTGGCTCATTTAAGGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR CCA 90 bp CTGGGTTGGTTGGTGAATTCAGGTGGATGGGAGCCTAATGTGATTTaGCATCGAGGTAAGGATTCATGGAGTTATATCCACAGGATATAT +
Preference number: 1 (lower is better)
Translates to: LGWLVNSGGWEPNVI*HRGKDSWSYIHRIY
Trigger: ATATATCCTGTGGATATAACTCCATGAATCCTTACCTCGATGCCAAATCACATTAGGCTCCCATCCACCTGAATTCACCAACCAACCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
3UTR TCA 90 bp CTTACTGCAGCACAGAGATTGAATGGCGAATGGGATCTTGAGAGTTaGTGGAAGAAAATCAATCCTTCAGCTTTTCCAACTTTATCTTCC +
Preference number: 1 (lower is better)
Translates to: LTAAQRLNGEWDLES*WKKINPSAFPTLSS
Trigger: GGAAGATAAAGTTGGAAAAGCTGAAGGATTGATTTTCTTCCATCAACTCTCAAGATCCCATTCGCCATTCAATCTCTGTGCTGCAGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR TCA 90 bp AGCCATGGAAATCTTTTCAGGGTAAGTAAAATTCAGTTGGAGTATTaGAGGATGAGTACAAGTTACTCAGGTAAAGAGGAGACAGGGAGG +
Preference number: 1 (lower is better)
Translates to: SHGNLFRVSKIQLEY*RMSTSYSGKEETGR
Trigger: CCTCCCTGTCTCCTCTTTACCTGAGTAACTTGTACTCATCCTTCAATACTCCAACTGAATTTTACTTACCCTGAAAAGATTTCCATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR CCA 90 bp GGTGGATGGGAGCCTAATGTGATTTGGCATCGAGGTAAGGATTCATaGAGTTATATCCACAGGATATATGCATTATGTGATAGTAAGAGA +
Preference number: 1 (lower is better)
Translates to: GGWEPNVIWHRGKDS*SYIHRIYALCDSKR
Trigger: TCTCTTACTATCACATAATGCATATATCCTGTGGATATAACTCCATGAATCCTTACCTCGATGCCAAATCACATTAGGCTCCCATCCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
3UTR TCA 90 bp CACATGAAAAATAAGCTTAAATTTACTACACTGGAGAACAAGACTTaGGCCTTAGTTAGGAATGGTCGAACAGCGCGGAACTCTTTTCTT +
Preference number: 1 (lower is better)
Translates to: HMKNKLKFTTLENKT*ALVRNGRTARNSFL
Trigger: AAGAAAAGAGTTCCGCGCTGTTCGACCATTCCTAACTAAGGCTCAAGTCTTGTTCTCCAGTGTAGTAAATTTAAGCTTATTTTTCATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
3UTR CCA 90 bp GGGATTTCTTTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTaGACTACCGTTTTCAACAAAAGCAAATTGAAGGAACACTTTCAG +
Preference number: 1 (lower is better)
Translates to: GISFIMNEVEGYHRS*TTVFNKSKLKEHFQ
Trigger: CTGAAAGTGTTCCTTCAATTTGCTTTTGTTGAAAACGGTAGTCCAGGACCTATGATATCCCTCCACTTCATTCATTATGAAAGAAATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
3UTR TCA 90 bp TGTGATTTATACTGTTTAAGATTGCTCTTACTGCAGCACAGAGATTaGATGGCGAATGGGATCTTGAGAGTTGATGGAAGAAAATCAATC +
Preference number: 1 (lower is better)
Translates to: CDLYCLRLLLLQHRD*MANGILRVDGRKSI
Trigger: GATTGATTTTCTTCCATCAACTCTCAAGATCCCATTCGCCATTCAATCTCTGTGCTGCAGTAAGAGCAATCTTAAACAGTATAAATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR GCA 90 bp TCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATTACATaGAGATGCCAATATCTTGTTTATCTACAAGGGATTTCTTTCATA +
Preference number: 1 (lower is better)
Translates to: SICVGSFQLNLGIIT*RCQYLVYLQGISFI
Trigger: TATGAAAGAAATCCCTTGTAGATAAACAAGATATTGGCATCTGCATGTAATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
3UTR TCA 90 bp TTCTTCATTTGTTATCTACCCCAAGCTATTATGAATGCCTTCATATaGTTTAAAGGGAACAATAGGAATAAGGGAAGAAGCCCAAGAGAC +
Preference number: 1 (lower is better)
Translates to: FFICYLPQAIMNAFI*FKGNNRNKGRSPRD
Trigger: GTCTCTTGGGCTTCTTCCCTTATTCCTATTGTTCCCTTTAAATCATATGAAGGCATTCATAATAGCTTGGGGTAGATAACAAATGAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR GCA 90 bp ATCCTTCAAGGCCAGACTTCTGAAATCATCCTAACTTGTGCTTTCTaGCAATACCCTAAGTACATGATTTTTATCTGTATTAGAGTACTT +
Preference number: 1 (lower is better)
Translates to: ILQGQTSEIILTCAF*QYPKYMIFICIRVL
Trigger: AAGTACTCTAATACAGATAAAAATCATGTACTTAGGGTATTGGCAGAAAGCACAAGTTAGGATGATTTCAGAAGTCTGGCCTTGAAGGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR GCA 90 bp TGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATTACATGCAGATaGCAATATCTTGTTTATCTACAAGGGATTTCTTTCATAATGAAT +
Preference number: 1 (lower is better)
Translates to: CVGSFQLNLGIITCR*QYLVYLQGISFIMN
Trigger: ATTCATTATGAAAGAAATCCCTTGTAGATAAACAAGATATTGGCATCTGCATGTAATTATCCCCAGATTCAGCTGAAAACTCCCAACACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
3UTR GCA 90 bp AACAGTGGTAAATTAGCATATAAATGTGAGGAGGTATTTGAAACATaGACTTCCTTCCAGAAGGAAAAAGCAATACAACTGCTATTGACT +
Preference number: 1 (lower is better)
Translates to: NSGKLAYKCEEVFET*TSFQKEKAIQLLLT
Trigger: AGTCAATAGCAGTTGTATTGCTTTTTCCTTCTGGAAGGAAGTGCATGTTTCAAATACCTCCTCACATTTATATGCTAATTTACCACTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527669.1
3UTR-3UTR TCA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTACACGTTGCTGCTGCTaGTGTCCGGCCAGCGCGTTA +
Preference number: 2 (lower is better)
Translates to: RSERSPGRNKQAPGHEGATRCCC*CPASAL
Trigger: TAACGCGCTGGCCGGACATCAGCAGCAGCAACGTGT...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR GCA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTCGTGTCCCTCAGGGCTaGGTTTCCACCAGTCACCAA +
Preference number: 2 (lower is better)
Translates to: REELRTEEIVYAVLHVLLRVPQG*VSTSHQ
Trigger: TTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACG...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR GCA 90 bp CATTGCCAAGCCCAAGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTGCTCACTCGTCTTGTCCTTaGTTCCAGAGTCCTTGGGTC +
Preference number: 2 (lower is better)
Translates to: HCQAQAANQNVEDACYIAHSSCP*FQSPWV
Trigger: GACCCAAGGACTCTGGAAGCAAGGACAAGACGAGTG...AGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCTTGGGCTTGGCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525942.1
3UTR-3UTR GCA 90 bp AGGTCCGATGCAATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGCGTGTCCCTCAGGGCTaGGTTTCCACCAGTCACCAA +
Preference number: 2 (lower is better)
Translates to: RSDAMTANPELCLIAVPVRVPQG*VSTSHQ
Trigger: TTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACG...CACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATTGCATCGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
3UTR-3UTR CCA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCGCAAAGACCCGCGCGTaGCGTGTCCCTCAGGGCTGC +
Preference number: 2 (lower is better)
Translates to: MFWRHRLACSRTSTTILSAKTRA*RVPQGC
Trigger: GCAGCCCTGAGGGACACGCCACGCGCGGGTCTTTGC...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR TCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTTTTGGGTTTCCGAGCTaGGCTCATGCACACGTTGCT +
Preference number: 2 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTFGFPS*AHAHVA
Trigger: AGCAACGTGTGCATGAGCTCAGCTCGGAAACCCAAA...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR TCA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCACACGTTGCTGCTGCTaGTGTCCGGCCAGCGCGTTA +
Preference number: 2 (lower is better)
Translates to: MFWRHRLACSRTSTTILSTRCCC*CPASAL
Trigger: TAACGCGCTGGCCGGACATCAGCAGCAGCAACGTGT...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR TCA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTATGAAGGGGCTCATGTaGTCTTCTCAAGAGCTTGGA +
Preference number: 2 (lower is better)
Translates to: RSERSPGRNKQAPGHEGAMKGLM*SSQELG
Trigger: TCCAAGCTCTTGAGAAGATCACATGAGCCCCTTCAT...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR TCA 90 bp ATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCACCACTCCCAACTCTGATTTGTCCTaGAACCAGGCAACTGTGGGA +
Preference number: 2 (lower is better)
Translates to: ICSVNQPTQIYILHTTTPNSDLS*NQATVG
Trigger: TCCCACAGTTGCCTGGTTTCAGGACAAATCAGAGTT...GGGAGTGGTGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
3UTR-3UTR GCA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGAATGAGCCACTGATGTaGATGGCTTTGGGCCACTGC +
Preference number: 2 (lower is better)
Translates to: WIEVREVLEEISKRQVMKNEPLM*MALGHC
Trigger: GCAGTGGCCCAAAGCCATGCACATCAGTGGCTCATT...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR TCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTGTGAATCGACTCATGTaGCATAGTGAAGGTTACAGC +
Preference number: 2 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTVNRLM*HSEGYS
Trigger: GCTGTAACCTTCACTATGTCACATGAGTCGATTCAC...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR TCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTCATTCATTCCTTAAATaGGCCACTGATGTGCATGGC +
Preference number: 2 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTHSFLK*ATDVHG
Trigger: GCCATGCACATCAGTGGCTCATTTAAGGAATGAATG...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR TCA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCGTAGGTCCGATGCAATaGCAGCCAATCCTGAACTTT +
Preference number: 2 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFVGPMQ*QPILNF
Trigger: AAAGTTCAGGATTGGCTGTCATTGCATCGGACCTAC...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
3UTR-3UTR GCA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCCGTGTCCCTCAGGGCTaGGTTTCCACCAGTCACCAA +
Preference number: 2 (lower is better)
Translates to: MFWRHRLACSRTSTTILSRVPQG*VSTSHQ
Trigger: TTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACG...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR CAA 90 bp TCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTTaGGGCCACTGCTCACTCATATGGCTCTTAACACCTTCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: SNGIHSLNEPLMCMA*GHCSLIWLLTPSPP
Trigger: AGGAGGAGAAGGTGTTAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR TCA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTTTGGGTTTCCGAGCTaGGCTCATGCACACGTTGCT +
Preference number: 2 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMFGFPS*AHAHVA
Trigger: AGCAACGTGTGCATGAGCTCAGCTCGGAAACCCAAA...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR TCA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGCTTGGAATTTTTCCTaGGGGACTTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: WIEVREVLEEISKRQVMKAWNFS*GTCVCV
Trigger: CACACACACACAAGTCCCTCAGGAAAAATTCCAAGC...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR CCA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCCTTCCATGGACTATATaGATGTTCTGGAGACACAGG +
Preference number: 2 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFLPWTI*MFWRHR
Trigger: CCTGTGTCTCCAGAACATCCATATAGTCCATGGAAG...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR TCA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGTCAAGGCCAGACTTCTaGAATCATCCTAACTTGTGC +
Preference number: 2 (lower is better)
Translates to: WIEVREVLEEISKRQVMKSRPDF*NHPNLC
Trigger: GCACAAGTTAGGATGATTTCAGAAGTCTGGCCTTGA...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR TCA 90 bp ACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATTGTGTGGAATAATAGATAAACAGGGCAGCCTCAAGTaGCATCACCAGATCATCTGC +
Preference number: 2 (lower is better)
Translates to: TALGEVTRLVSLCGIIDKQGSLK*HHQIIC
Trigger: GCAGATGATCTGGTGATGTCACTTGAGGCTGCCCTG...TTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
3UTR CAA 90 bp GGCTCATGTGATCTTCTCAAGAGCTTGGAATTTTTCCTGAGGGACTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTAT +
Preference number: 2 (lower is better)
Translates to: GSCDLLKSLEFFLRD*CVCVCVCVCVCVIY
Trigger: ATAAATCACACACACACACACACACACACACACACACACACACAAGTCCCTCAGGAAAAATTCCAAGCTCTTGAGAAGATCACATGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR TCA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCTGGAGTATTGAAGGATaGGTACAAGTTACTCAGGTA +
Preference number: 2 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFWSIEG*VQVTQV
Trigger: TACCTGAGTAACTTGTACTCATCCTTCAATACTCCA...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR TCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTCTCCCACACTCCCAGTaGTGGATAATCTGGCTTTGT +
Preference number: 2 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFLPHSQ*WIIWLC
Trigger: ACAAAGCCAGATTATCCATCACTGGGAGTGTGGGAG...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393127.6
3UTR-3UTR CCA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCTCTCAGCCAAAGGATTaGTTTAGCAAAGACCCGCGC +
Preference number: 2 (lower is better)
Translates to: MFWRHRLACSRTSTTILSSQPKD*FSKDPR
Trigger: GCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGA...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR CCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTTCTCAGCCAAAGGATTaGTTTAGCAAAGACCCGCGC +
Preference number: 2 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFSQPKD*FSKDPR
Trigger: GCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGA...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR CCA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTCACTGCTCACTCATATaGCTCTTAACACCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMAHCSLI*LLTPSP
Trigger: AGGAGAAGGTGTTAAGAGCCATATGAGTGAGCAGTG...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR TCA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTCAAGGCCAGACTTCTaGAATCATCCTAACTTGTGC +
Preference number: 2 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMSRPDF*NHPNLC
Trigger: GCACAAGTTAGGATGATTTCAGAAGTCTGGCCTTGA...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR TCA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGTGGGATCTTGAGAGTTaGTGGAAGAAAATCAATCCT +
Preference number: 2 (lower is better)
Translates to: WIEVREVLEEISKRQVMKWDLES*WKKINP
Trigger: AGGATTGATTTTCTTCCATCAACTCTCAAGATCCCA...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR GCA 90 bp ACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATTGTGTGGAATAATAGATAAACATCACCAGATCATCTaGAGCGTCAACCAACCGACT +
Preference number: 2 (lower is better)
Translates to: TALGEVTRLVSLCGIIDKHHQII*SVNQPT
Trigger: AGTCGGTTGGTTGACGCTGCAGATGATCTGGTGATG...TTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
3UTR CAA 90 bp AACTGCTTTCTTACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATaGTGTGGAATAATAGATAAAGCTGGGTTGGTTGGTGAATTCAGG +
Preference number: 2 (lower is better)
Translates to: NCFLTALGEVTRLVS*CGIIDKAGLVGEFR
Trigger: CCTGAATTCACCAACCAACCCAGCTTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGTAAGAAAGCAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
3UTR-3UTR TCA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGAGACAAAGGCCTTTCTaGGCAAGAACTTCACAGTTT +
Preference number: 2 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMRQRPF*ARTSQF
Trigger: AAACTGTGAAGTTCTTGCTCAGAAAGGCCTTTGTCT...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR TCA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCAGACAAATGCAATCGGTaGATCGACTCATGTGACATA +
Preference number: 2 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNADKCNR*IDSCDI
Trigger: TATGTCACATGAGTCGATTCACCGATTGCATTTGTC...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR TCA 90 bp TTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTGGACTACCGTTTTCAACCTGGAGAACAAGACTTaGGCCTTAGTTAGGAATGGT +
Preference number: 2 (lower is better)
Translates to: FIMNEVEGYHRSWTTVFNLENKT*ALVRNG
Trigger: ACCATTCCTAACTAAGGCTCAAGTCTTGTTCTCCAG...GTTGAAAACGGTAGTCCAGGACCTATGATATCCCTCCACTTCATTCATTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
3UTR-3UTR TCA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCATTGTTGTTAGGACAGTaGTTCATTCCCCAACTCAAA +
Preference number: 2 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNALLLGQ*FIPQLK
Trigger: TTTGAGTTGGGGAATGAATCACTGTCCTAACAACAA...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTAATGGCTTTGGGCCACTaGTCACTCATATGGCTCTTA +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLMALGH*SLIWLL
Trigger: TAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCAT...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR CCA 90 bp TATCTACAAGGGATTTCTTTCATAATGAATGAAGTGGAGGGATATCATAGGTCCCTGGTAGTCCAGAGTTaGTCATCCAAGAAGAATCCC +
Preference number: 2 (lower is better)
Translates to: YLQGISFIMNEVEGYHRSLVVQS*SSKKNP
Trigger: GGGATTCTTCTTGGATGACCAACTCTGGACTACCAG...GGACCTATGATATCCCTCCACTTCATTCATTATGAAAGAAATCCCTTGTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
3UTR-3UTR CCA 90 bp TTATATCCAGTGCTCACTCTCAGCCTTCTATATCTAGATATAGGTATCACATATCTGGTAGTCCAGAGTTaGTCATCCAAGAAGAATCCC +
Preference number: 2 (lower is better)
Translates to: LYPVLTLSLLYLDIGITYLVVQS*SSKKNP
Trigger: GGGATTCTTCTTGGATGACCAACTCTGGACTACCAG...ATATGTGATACCTATATCTAGATATAGAAGGCTGAGAGTGAGCACTGGATATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
3UTR-3UTR TCA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCCTGGAGAACAAGACTTaGGCCTTAGTTAGGAATGGT +
Preference number: 2 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILLENKT*ALVRNG
Trigger: ACCATTCCTAACTAAGGCTCAAGTCTTGTTCTCCAG...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
3UTR-3UTR CCA 90 bp TTATATCCAGTGCTCACTCTCAGCCTTCTATATCTAGATATAGGTATCACATATGGATATCATAGGTCCTaGACTACCGTTTTCAACAAA +
Preference number: 2 (lower is better)
Translates to: LYPVLTLSLLYLDIGITYGYHRS*TTVFNK
Trigger: TTTGTTGAAAACGGTAGTCCAGGACCTATGATATCC...ATATGTGATACCTATATCTAGATATAGAAGGCTGAGAGTGAGCACTGGATATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
3UTR-3UTR CCA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCTTAAATTTACTACACTaGAGAACAAGACTTGAGCCT +
Preference number: 2 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILLNLLH*RTRLEP
Trigger: AGGCTCAAGTCTTGTTCTCCAGTGTAGTAAATTTAA...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
3UTR TCA 72 bp GTTTCCGAGCTGAGCTCATGCACACGTTGCTGCTGCTaGTGTCCGGCCAGCGCGTTAGGACGGACTTCCCGC +
Preference number: 3 (lower is better)
Translates to: VSELSSCTRCCC*CPASALGRTSR
Trigger: GCGGGAAGTCCGTCCTAACGCGCTGGCCGGACATCAGCAGCAGCAACGTGTGCATGAGCTCAGCTCGGAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR CCA 72 bp CTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTaGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCAC +
Preference number: 3 (lower is better)
Translates to: LSQRIGLAKTRA*RVPQGCVSTSH
Trigger: GTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR CCA 72 bp GCGTTAGGACGGACTTCCCGCTCTCAGCCAAAGGATTaGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCTCA +
Preference number: 3 (lower is better)
Translates to: ALGRTSRSQPKD*FSKDPRVACPS
Trigger: TGAGGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGAAGTCCGTCCTAACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR CAA 90 bp CATTGCCAAGCCCAAGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTGCTGCACTCGTCTTGTCCTaGCTTCCAGAGTCCTTGGGT +
Preference number: 3 (lower is better)
Translates to: HCQAQAANQNVEDACYIAALVLS*LPESLG
Trigger: ACCCAAGGACTCTGGAAGCAAGGACAAGACGAGTGC...AGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCTTGGGCTTGGCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525942.1
3UTR-3UTR CAA 90 bp CATTGCCAAGCCCAAGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTGCTCTCAAGGCACTCGTCTaGTCCTTGCTTCCAGAGTCC +
Preference number: 3 (lower is better)
Translates to: HCQAQAANQNVEDACYIALKALV*SLLPES
Trigger: GGACTCTGGAAGCAAGGACAAGACGAGTGCCTTGAG...AGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCTTGGGCTTGGCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525942.1
3UTR GCA 72 bp AGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTaGTCAGGCTCAAGGCACTCGTCTTGTCCTTGCTTC +
Preference number: 3 (lower is better)
Translates to: SRQPECRRRLLH*SGSRHSSCPCF
Trigger: GAAGCAAGGACAAGACGAGTGCCTTGAGCCTGAGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525942.1
3UTR CCA 72 bp ACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTaGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCC +
Preference number: 3 (lower is better)
Translates to: TLSDCSSSVYSL*AVRRQDAAILS
Trigger: GGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGCAATCAGACAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
3UTR TCA 72 bp ACGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATaGAAAAGGGCACCTAACTCAGTCTCACAGGCAGGG +
Preference number: 3 (lower is better)
Translates to: TQYGKCRDGGKT*KRAPNSVSQAG
Trigger: CCCTGCCTGTGAGACTGAGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR CAA 90 bp AGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTATGGATAATCTGGCTTaGTTTCTTATGGCTTCAGAA +
Preference number: 3 (lower is better)
Translates to: SLWAVRRQDAAILSHTPSMDNLA*FLMASE
Trigger: TTCTGAAGCCATAAGAAACAAAGCCAGATTATCCAT...ACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
3UTR TCA 72 bp ACTCAGGTAAAGAGGAGACAGGGAGGAGTTACGCACTaGGGAAATAGTCTATGCAGTGCTCCATGTGCTGCT +
Preference number: 3 (lower is better)
Translates to: TQVKRRQGGVTH*GNSLCSAPCAA
Trigger: AGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCTGTCTCCTCTTTACCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR CAA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTGAGCTCATGCACACGTaGCTGCTGCTGATGTCCGGC +
Preference number: 3 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFELMHT*LLLMSG
Trigger: GCCGGACATCAGCAGCAGCAACGTGTGCATGAGCTC...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR CAA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTACTGCAGCACAGAGATaGAATGGCGAATGGGATCTT +
Preference number: 3 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTTAAQR*NGEWDL
Trigger: AAGATCCCATTCGCCATTCAATCTCTGTGCTGCAGT...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR GCA 72 bp TTAAATGAGCCACTGATGTGCATGGCTTTGGGCCACTaGTCACTCATATGGCTCTTAACACCTTCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: LNEPLMCMALGH*SLIWLLTPSPP
Trigger: AGGAGGAGAAGGTGTTAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCATGCACATCAGTGGCTCATTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR GCA 72 bp TCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTaGATGGCTTTGGGCCACTGCTCACTCATATGGCTC +
Preference number: 3 (lower is better)
Translates to: SNGIHSLNEPLM*MALGHCSLIWL
Trigger: GAGCCATATGAGTGAGCAGTGGCCCAAAGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR CCA 72 bp CTGATGTGCATGGCTTTGGGCCACTGCTCACTCATATaGCTCTTAACACCTTCTCCTCCTGTTAAAACTCAA +
Preference number: 3 (lower is better)
Translates to: LMCMALGHCSLI*LLTPSPPVKTQ
Trigger: TTGAGTTTTAACAGGAGGAGAAGGTGTTAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCATGCACATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR TCA 72 bp GCTCATGTGATCTTCTCAAGAGCTTGGAATTTTTCCTaGGGGACTTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: AHVIFSRAWNFS*GTCVCVCVCVC
Trigger: ACACACACACACACACACACACACACAAGTCCCTCAGGAAAAATTCCAAGCTCTTGAGAAGATCACATGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR CCA 72 bp TGCTGCTTTGGAGGTTCATTTGCTGACGGGAATAGCTaGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGC +
Preference number: 3 (lower is better)
Translates to: CCFGGSFADGNS*IEVREVLEEIS
Trigger: GCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCAGCTATTCCCGTCAGCAAATGAACCTCCAAAGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR CAA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCATTTTTCCTGAGGGACTaGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNAFFLRD*CVCVCV
Trigger: CACACACACACACACACACAAGTCCCTCAGGAAAAA...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR CAA 90 bp GCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCAGATGGATAATCTGGCTTaGTTTCTTATGGCTTCAGAA +
Preference number: 3 (lower is better)
Translates to: ANPELCLIAVPVCTAFGQMDNLA*FLMASE
Trigger: TTCTGAAGCCATAAGAAACAAAGCCAGATTATCCAT...CTGCCCAAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
3UTR CCA 72 bp TTGGTGAATTCAGGTGGATGGGAGCCTAATGTGATTTaGCATCGAGGTAAGGATTCATGGAGTTATATCCAC +
Preference number: 3 (lower is better)
Translates to: LVNSGGWEPNVI*HRGKDSWSYIH
Trigger: GTGGATATAACTCCATGAATCCTTACCTCGATGCCAAATCACATTAGGCTCCCATCCACCTGAATTCACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTACTGATGTGCATGGCTTaGGGCCACTGCTCACTCATA +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLLMCMA*GHCSLI
Trigger: TATGAGTGAGCAGTGGCCCAAAGCCATGCACATCAG...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR-3UTR CAA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGTTATACTGTTTAAGATaGCTCTTACTGCAGCACAGA +
Preference number: 3 (lower is better)
Translates to: WIEVREVLEEISKRQVMKLYCLR*LLLQHR
Trigger: TCTGTGCTGCAGTAAGAGCAATCTTAAACAGTATAA...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR TCA 72 bp GCACAGAGATTGAATGGCGAATGGGATCTTGAGAGTTaGTGGAAGAAAATCAATCCTTCAGCTTTTCCAACT +
Preference number: 3 (lower is better)
Translates to: AQRLNGEWDLES*WKKINPSAFPT
Trigger: AGTTGGAAAAGCTGAAGGATTGATTTTCTTCCATCAACTCTCAAGATCCCATTCGCCATTCAATCTCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR TCA 72 bp TACTGTTTAAGATTGCTCTTACTGCAGCACAGAGATTaGATGGCGAATGGGATCTTGAGAGTTGATGGAAGA +
Preference number: 3 (lower is better)
Translates to: YCLRLLLLQHRD*MANGILRVDGR
Trigger: TCTTCCATCAACTCTCAAGATCCCATTCGCCATTCAATCTCTGTGCTGCAGTAAGAGCAATCTTAAACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR TCA 72 bp AATAAGCTTAAATTTACTACACTGGAGAACAAGACTTaGGCCTTAGTTAGGAATGGTCGAACAGCGCGGAAC +
Preference number: 3 (lower is better)
Translates to: NKLKFTTLENKT*ALVRNGRTARN
Trigger: GTTCCGCGCTGTTCGACCATTCCTAACTAAGGCTCAAGTCTTGTTCTCCAGTGTAGTAAATTTAAGCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
3UTR TCA 72 bp GGAGGAATTGTACAACTGCTTTCTTACGGCATTAGGTaGGGTCACCCGTTTAGTTTCATTGTGTGGAATAAT +
Preference number: 3 (lower is better)
Translates to: GGIVQLLSYGIR*GHPFSFIVWNN
Trigger: ATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGTAAGAAAGCAGTTGTACAATTCCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
3UTR-3UTR CAA 90 bp ATCTACCCTTGGAAATGGAGTGATATAATTCCATCATTTACATACAGTGACCTCTCTGGTAGTCCAGAGTaGGTCATCCAAGAAGAATCC +
Preference number: 3 (lower is better)
Translates to: IYPWKWSDIIPSFTYSDLSGSPE*VIQEES
Trigger: GGATTCTTCTTGGATGACCAACTCTGGACTACCAGA...GAGGTCACTGTATGTAAATGATGGAATTATATCACTCCATTTCCAAGGGTAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
3UTR-3UTR CAA 90 bp ACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATTGTGTGGAATAATAGATAAAAGGAAGAGGACTCCATaGCTTGGTTTCAGTTCTCTT +
Preference number: 3 (lower is better)
Translates to: TALGEVTRLVSLCGIIDKRKRTP*LGFSSL
Trigger: AAGAGAACTGAAACCAAGCAATGGAGTCCTCTTCCT...TTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527669.1
3UTR-3UTR CAA 90 bp TTCCATCATTTACATACAGTGACCTCATTTCAAGATAGGGGAATTGATATGTCATCTGGTAGTCCAGAGTaGGTCATCCAAGAAGAATCC +
Preference number: 3 (lower is better)
Translates to: FHHLHTVTSFQDRGIDMSSGSPE*VIQEES
Trigger: GGATTCTTCTTGGATGACCAACTCTGGACTACCAGA...TGACATATCAATTCCCCTATCTTGAAATGAGGTCACTGTATGTAAATGATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
3UTR TCA 72 bp AACACACAATTACAAGGTATGTTGTTGTTAGGACAGTaGTTCATTCCCCAACTCAAAGACTCCATCTTTGAC +
Preference number: 3 (lower is better)
Translates to: NTQLQGMLLLGQ*FIPQLKDSIFD
Trigger: GTCAAAGATGGAGTCTTTGAGTTGGGGAATGAATCACTGTCCTAACAACAACATACCTTGTAATTGTGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR CCA 72 bp TTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTaGACTACCGTTTTCAACAAAAGCAAATTGAAGGAA +
Preference number: 3 (lower is better)
Translates to: FIMNEVEGYHRS*TTVFNKSKLKE
Trigger: TTCCTTCAATTTGCTTTTGTTGAAAACGGTAGTCCAGGACCTATGATATCCCTCCACTTCATTCATTATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
3UTR TCA 72 bp TGTTATCTACCCCAAGCTATTATGAATGCCTTCATATaGTTTAAAGGGAACAATAGGAATAAGGGAAGAAGC +
Preference number: 3 (lower is better)
Translates to: CYLPQAIMNAFI*FKGNNRNKGRS
Trigger: GCTTCTTCCCTTATTCCTATTGTTCCCTTTAAATCATATGAAGGCATTCATAATAGCTTGGGGTAGATAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR GCA 72 bp AGTTTTCAGCTGAATCTGGGGATAATTACATGCAGATaGCAATATCTTGTTTATCTACAAGGGATTTCTTTC +
Preference number: 3 (lower is better)
Translates to: SFQLNLGIITCR*QYLVYLQGISF
Trigger: GAAAGAAATCCCTTGTAGATAAACAAGATATTGGCATCTGCATGTAATTATCCCCAGATTCAGCTGAAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp CTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATCCCACGGGCCAGGTCTaGAAGCCCCAATCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LWAVRRQDAAILSHTPSDPTGQV*KPQSGA
Trigger: AGCCCCCGATTGGGGCTTGCAGACCTGGCCCGTGGG...ATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR GCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCCCCCTGCCGCATCCTTaGAGGTTCGTGAGGAGGACG +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPPLPHP*RFVRRT
Trigger: CGTCCTCCTCACGAACCTGCAAGGATGCGGCAGGGG...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000393127.6
CDS-3UTR CCA 90 bp AGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCCAGAGGGACCGACTCTaGGGATGGGCACCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: SSSVYSLWAVRRQDAAILQRDRL*GWAPPA
Trigger: CGCTGGGGGTGCCCATCCCCAGAGTCGGTCCCTCTG...GAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR GCA 90 bp AAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGAGACGCCTGCTACATTaGTCAGGCTCAAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: KTRAWRVPQGCVSTSHQQRRLLH*SGSRHS
Trigger: CGAGTGCCTTGAGCCTGAGCAATGTAGCAGGCGTCT...CTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp CAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGCGTGTCCCTCAGGGCTaGGTTTCCACCAGTCACCAA +
Preference number: 4 (lower is better)
Translates to: QPLGSQASRRGHSLPHSQRVPQG*VSTSHQ
Trigger: TTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACG...CTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR CCA 90 bp AAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGAGTTGCAGCACAAACTaGCTCTCCCCCTCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: KTRAWRVPQGCVSTSHQQSCSTN*LSPSVG
Trigger: CCCTACTGAGGGGGAGAGCCAGTTTGTGCTGCAACT...CTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp AGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTTTTTCCTGGCACCTCTaGTTCTCGGCTGCGCTAGGC +
Preference number: 4 (lower is better)
Translates to: SLWAVRRQDAAILSHTPSFSWHL*FSAALG
Trigger: GCCTAGCGCAGCCGAGAAGCAGAGGTGCCAGGAAAA...ACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR GCA 90 bp AAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGCACTCGTCTTGTCCTTaGTTCCAGAGTCCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: KTRAWRVPQGCVSTSHQQHSSCP*FQSPWV
Trigger: GACCCAAGGACTCTGGAAGCAAGGACAAGACGAGTG...CTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000530497.1
CDS-3UTR GCA 90 bp AAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGAGGCACTGTGCTGGGTaGTGGGGATACAACTGTGAA +
Preference number: 4 (lower is better)
Translates to: KTRAWRVPQGCVSTSHQQRHCAG*WGYNCE
Trigger: TTCACAGTTGTATCCCCAGCACCCAGCACAGTGCCT...CTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp CAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGAGTTGCAGCACAAACTaGCTCTCCCCCTCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: QPLGSQASRRGHSLPHSQSCSTN*LSPSVG
Trigger: CCCTACTGAGGGGGAGAGCCAGTTTGTGCTGCAACT...CTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp AAAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAAATTCCCTGGCCCCATaGAGCAGCAGGATTTGCCAG +
Preference number: 4 (lower is better)
Translates to: KDPRVACPSGLRFHQSPTNSLAP*SSRICQ
Trigger: CTGGCAAATCCTGCTGCTCCATGGGGCCAGGGAATT...TGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp AAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGAGTGTGTACAGCCTTTaGGCAGTCAGGCGTCAAGAC +
Preference number: 4 (lower is better)
Translates to: KTRAWRVPQGCVSTSHQQSVYSL*AVRRQD
Trigger: GTCTTGACGCCTGACTGCCCAAAGGCTGTACACACT...CTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp CAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCGTCTTGTCCTTaGAGTCACCTCCCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: QCVQPLGSQASRRGHSLPHSSCP*SHLPRC
Trigger: GCAGCGGGGGAGGTGACTCCAAGGACAAGACGAGTG...TGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCTCAGGTTTTCCCTTCTaGCCACTCGCTGACTCCCTC +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPSGFPF*PLADSL
Trigger: GAGGGAGTCAGCGAGTGGTCAGAAGGGAAAACCTGA...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000393127.6
CDS-3UTR GCA 90 bp AAAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGGAACCCTTGGGCGTTaGTACTCCATAGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: KDPRVACPSGLRFHQSPTGTLGR*YSIAFG
Trigger: TCCAAAGGCTATGGAGTAGCAACGCCCAAGGGTTCC...TGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCAAAGCCACCAGCATTaGCAAGCCCAAGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: CTAFGQSGVKTRPFSPTLQSHQH*QAQAAN
Trigger: GTTGGCGGCTTGGGCTTGGCAATGCTGGTGGCTTTG...GAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp TGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACCCTCTCCTACAGTCCTaGCTTCCCTCTCAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: CVQPLGSQASRRGHSLPHPLLQS*LPSQPS
Trigger: GCTAGGCTGAGAGGGAAGCCAGGACTGTAGGAGAGG...GTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR CCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCTCGGAAAGGCTCCCATaGCGAGTCCCCAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPSERLP*RVPKIQ
Trigger: CTGGATTTTGGGGACTCGCCATGGGAGCCTTTCCGA...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp CAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTTGGGAGGCTGGTCGCTaGGTCCTTCCTTTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: QFQCVQPLGSQASRRGHSWEAGR*VLPFRP
Trigger: AGGACGGAAAGGAAGGACCCAGCGACCAGCCTCCCA...AGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp ACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCATTTGGGTTTCCGAGCTaGGCTCATGCACACGTTGCT +
Preference number: 4 (lower is better)
Translates to: TAFGQSGVKTRPFSPTLPFGFPS*AHAHVA
Trigger: AGCAACGTGTGCATGAGCTCAGCTCGGAAACCCAAA...TGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR GCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTCCCACGGGCCAGGTCTaGAAGCCCCAATCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTPTGQV*KPQSGA
Trigger: AGCCCCCGATTGGGGCTTGCAGACCTGGCCCGTGGG...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000393127.6
CDS-3UTR GCA 90 bp GTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCACCTATTTGCACGCTaGTCGGAAAGGCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: VYSLWAVRRQDAAILSHTHLFAR*SERLPW
Trigger: CCATGGGAGCCTTTCCGAGCAGCGTGCAAATAGGTG...AGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp CAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGAAGAGACCACCTATTTaGACGCTGCTCGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: QPLGSQASRRGHSLPHSQKRPPI*TLLGKA
Trigger: AGCCTTTCCGAGCAGCGTGCAAATAGGTGGTCTCTT...CTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp AAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGTTTGGCCAGGTCTTCTaGACTTTCTATGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: KTRAWRVPQGCVSTSHQQFGQVF*TFYGRD
Trigger: GTCTCTCCCATAGAAAGTGCAGAAGACCTGGCCAAA...CTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCGGAACCCTTGGGCGTTaGTACTCCATAGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPGTLGR*YSIAFG
Trigger: TCCAAAGGCTATGGAGTAGCAACGCCCAAGGGTTCC...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACAGACGCCTGCTACATTaGTCAGGCTCAAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: CVQPLGSQASRRGHSLPHRRLLH*SGSRHS
Trigger: CGAGTGCCTTGAGCCTGAGCAATGTAGCAGGCGTCT...GTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp TCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCAGACGCCTGCTACATTaGTCAGGCTCAAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: SSVYSLWAVRRQDAAILSRRLLH*SGSRHS
Trigger: CGAGTGCCTTGAGCCTGAGCAATGTAGCAGGCGTCT...GGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCAATGAGCCACTGATGTaGATGGCTTTGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPNEPLM*MALGHC
Trigger: GCAGTGGCCCAAAGCCATGCACATCAGTGGCTCATT...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp CTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATTCGGAAAGGCTCCCATaGCGAGTCCCCAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: LWAVRRQDAAILSHTPSDSERLP*RVPKIQ
Trigger: CTGGATTTTGGGGACTCGCCATGGGAGCCTTTCCGA...ATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCAACTCATTGGGAGGCTaGTCGCTGGGTCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPNSLGG*SLGPSF
Trigger: AAAGGAAGGACCCAGCGACCAGCCTCCCAATGAGTT...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTGCAAAGACCCGCGCGTaGCGTGTCCCTCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTAKTRA*RVPQGC
Trigger: GCAGCCCTGAGGGACACGCCACGCGCGGGTCTTTGC...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGGATAATCTGCACTCGTCTTGTCCTTaGAGTCACCTCCCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SGVKTRPFSPTLPVMDNLHSSCP*SHLPRC
Trigger: GCAGCGGGGGAGGTGACTCCAAGGACAAGACGAGTG...CAGATTATCCATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp AAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGGATCTGTGTTTCGGATaGAGAGACCACCTATTTGCA +
Preference number: 4 (lower is better)
Translates to: KTRAWRVPQGCVSTSHQQDLCFG*RDHLFA
Trigger: TGCAAATAGGTGGTCTCTTCATCCGAAACACAGATC...CTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp CAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCACCTATTTGCACGCTaGTCGGAAAGGCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: QFQCVQPLGSQASRRGHSHLFAR*SERLPW
Trigger: CCATGGGAGCCTTTCCGAGCAGCGTGCAAATAGGTG...AGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCAAGAGACCACCTATTTaGACGCTGCTCGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPKRPPI*TLLGKA
Trigger: AGCCTTTCCGAGCAGCGTGCAAATAGGTGGTCTCTT...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp AAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGCATATAGCGCTGACATaGCAACCATTTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KTRAWRVPQGCVSTSHQQHIALT*QPFCPA
Trigger: AGCAGGACAAAATGGTTGGCATGTCAGCGCTATATG...CTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp GTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTGGAACCCTTGGGCGTTaGTACTCCATAGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: VYSLWAVRRQDAAILSHTGTLGR*YSIAFG
Trigger: TCCAAAGGCTATGGAGTAGCAACGCCCAAGGGTTCC...AGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp TTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGGGAACCCTTGGGCGTTaGTACTCCATAGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: FGQSGVKTRPFSPTLPVMGTLGR*YSIAFG
Trigger: TCCAAAGGCTATGGAGTAGCAACGCCCAAGGGTTCC...CATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp TACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCGAGCTTCCGACGCATTaGGGCTGGTGTTATGAAGAA +
Preference number: 4 (lower is better)
Translates to: YSLWAVRRQDAAILSHTPELPTH*GWCYEE
Trigger: TTCTTCATAACACCAGCCCCAATGCGTCGGAAGCTC...GGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp TACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGCAGAGGTGTACTTTaGAGGAGTCTCAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: YSLWAVRRQDAAILSHTPSRGVL*RSLRSW
Trigger: CCAGGATCTGAGACTCCTCCAAAGTACACCTCTGCT...GGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp CTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGAATTCCCTGGCCCCATaGAGCAGCAGGATTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LIAVPVCTAFGQSGVKTRNSLAP*SSRICQ
Trigger: CTGGCAAATCCTGCTGCTCCATGGGGCCAGGGAATT...CCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGCAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp CAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTAATTCCCTGGCCCCATaGAGCAGCAGGATTTGCCAG +
Preference number: 4 (lower is better)
Translates to: QFQCVQPLGSQASRRGHSNSLAP*SSRICQ
Trigger: CTGGCAAATCCTGCTGCTCCATGGGGCCAGGGAATT...AGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp CTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGTCCATGTCAATTCCCTaGCCCCATGGAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LIAVPVCTAFGQSGVKTRSMSIP*PHGAAG
Trigger: TCCTGCTGCTCCATGGGGCCAGGGAATTGACATGGA...CCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGCAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp TCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCTTCCTTTCCGTCCTCTaGCTCTTCTGTGTGCCACTC +
Preference number: 4 (lower is better)
Translates to: SSVYSLWAVRRQDAAILSFLSVL*LFCVPL
Trigger: GAGTGGCACACAGAAGAGCCAGAGGACGGAAAGGAA...GGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp GTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTAACTCATTGGGAGGCTaGTCGCTGGGTCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VYSLWAVRRQDAAILSHTNSLGG*SLGPSF
Trigger: AAAGGAAGGACCCAGCGACCAGCCTCCCAATGAGTT...AGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp AAAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAAGGCAAATTTGCCCTTaGATTTGCGGACACGAGCTA +
Preference number: 4 (lower is better)
Translates to: KDPRVACPSGLRFHQSPTRQICP*ICGHEL
Trigger: TAGCTCGTGTCCGCAAATCCAAGGGCAAATTTGCCT...TGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp AAAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACATTAATGAGGAACCCTTaGGCGTTGCTACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: KDPRVACPSGLRFHQSPTLMRNP*ALLLHS
Trigger: GCTATGGAGTAGCAACGCCCAAGGGTTCCTCATTAA...TGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCGCAAAGACCCGCGCGTaGCGTGTCCCTCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFAKTRA*RVPQGC
Trigger: GCAGCCCTGAGGGACACGCCACGCGCGGGTCTTTGC...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp ACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGGCAAAGACCCGCGCGTaGCGTGTCCCTCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TANPELCLIAVPVCTAFGAKTRA*RVPQGC
Trigger: GCAGCCCTGAGGGACACGCCACGCGCGGGTCTTTGC...CCCAAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR CCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCTCTCAGCCAAAGGATTaGTTTAGCAAAGACCCGCGC +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPSQPKD*FSKDPR
Trigger: GCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGA...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGGATAATCTGTGTTCAGAGAAGCATTaGAGACGATGGCGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: SGVKTRPFSPTLPVMDNLCSEKH*RRWRGA
Trigger: CGCTCCGCGCCATCGTCTTCAATGCTTCTCTGAACA...CAGATTATCCATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR TCA 90 bp AAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGAATGACAGCCAATCCTaGACTTTGTCTGATTGCAGT +
Preference number: 4 (lower is better)
Translates to: KTRAWRVPQGCVSTSHQQNDSQS*TLSDCS
Trigger: ACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATT...CTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp ACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTAGGTCCGATGCAATaGCAGCCAATCCTGAACTTT +
Preference number: 4 (lower is better)
Translates to: TAFGQSGVKTRPFSPTLPVGPMQ*QPILNF
Trigger: AAAGTTCAGGATTGGCTGTCATTGCATCGGACCTAC...TGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp AAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGGACAAATGCAATCGGTaGATCGACTCATGTGACATA +
Preference number: 4 (lower is better)
Translates to: KTRAWRVPQGCVSTSHQQDKCNR*IDSCDI
Trigger: TATGTCACATGAGTCGATTCACCGATTGCATTTGTC...CTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCGCTTGGAATTTTTCCTaGGGGACTTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPAWNFS*GTCVCV
Trigger: CACACACACACAAGTCCCTCAGGAAAAATTCCAAGC...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp GTGCATGGCTTTGGGCCACTGCTCACTCATATGGCTCTTAACACCTTCTCCTCCTTTTCCTGGCACCTCTaGTTCTCGGCTGCGCTAGGC +
Preference number: 4 (lower is better)
Translates to: VHGFGPLLTHMALNTFSSFSWHL*FSAALG
Trigger: GCCTAGCGCAGCCGAGAAGCAGAGGTGCCAGGAAAA...GGAGGAGAAGGTGTTAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCATGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000393127.6
CDS-3UTR GCA 90 bp TACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAACGAAGGTCTTAGTTaGAGCACAAACTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: YSLWAVRRQDAAILSHTPNEGLS*STNWLS
Trigger: GGAGAGCCAGTTTGTGCTGCAACTAAGACCTTCGTT...GGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp CATTGCCAAGCCCAAGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTGCTCAAAGCCACCAGCATTaGCAAGCCCAAGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: HCQAQAANQNVEDACYIAQSHQH*QAQAAN
Trigger: GTTGGCGGCTTGGGCTTGGCAATGCTGGTGGCTTTG...AGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCTTGGGCTTGGCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525942.1
CDS-3UTR GCA 90 bp AAAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACACATTCTCTTCGCTTCTaGCCTGGACTTGTAACAGAA +
Preference number: 4 (lower is better)
Translates to: KDPRVACPSGLRFHQSPTHSLRF*PGLVTE
Trigger: TTCTGTTACAAGTCCAGGGCAGAAGCGAAGAGAATG...TGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp ACCAGATCATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCACAGAGGGACCGACTCTaGGGATGGGCACCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: TRSSAASTNRLKYISSTPQRDRL*GWAPPA
Trigger: CGCTGGGGGTGCCCATCCCCAGAGTCGGTCCCTCTG...TGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGATGATCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR CCA 90 bp GGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGGATGACCTGAGAGGGATCTaGGTGAAATGTCACATCCTT +
Preference number: 4 (lower is better)
Translates to: GQSGVKTRPFSPTLPVMDDLRGI*VKCHIL
Trigger: AAGGATGTGACATTTCACCCAGATCCCTCTCAGGTC...ATCCATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCAGGCAAATTTGCCCTTaGATTTGCGGACACGAGCTA +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPRQICP*ICGHEL
Trigger: TAGCTCGTGTCCGCAAATCCAAGGGCAAATTTGCCT...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCTTAATGAGGAACCCTTaGGCGTTGCTACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPLMRNP*ALLLHS
Trigger: GCTATGGAGTAGCAACGCCCAAGGGTTCCTCATTAA...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp GTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTTCTCAGCCAAAGGATTaGTTTAGCAAAGACCCGCGC +
Preference number: 4 (lower is better)
Translates to: VYSLWAVRRQDAAILSHTSQPKD*FSKDPR
Trigger: GCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGA...AGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR CCA 90 bp AAAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACACTTCCATGGACTATATaGATGTTCTGGAGACACAGG +
Preference number: 4 (lower is better)
Translates to: KDPRVACPSGLRFHQSPTLPWTI*MFWRHR
Trigger: CCTGTGTCTCCAGAACATCCATATAGTCCATGGAAG...TGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp AAAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACACACTGCTCACTCATATaGCTCTTAACACCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KDPRVACPSGLRFHQSPTHCSLI*LLTPSP
Trigger: AGGAGAAGGTGTTAAGAGCCATATGAGTGAGCAGTG...TGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCGAATTCGAACCTGTTTaGGTGTCCTCTCCATGTCAA +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPEFEPV*VSSPCQ
Trigger: TTGACATGGAGAGGACACTCAAACAGGTTCGAATTC...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp GTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTTTCCCTGTCAGCCCTTaGATTCGAACCTGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: VYSLWAVRRQDAAILSHTFPVSP*IRTCLS
Trigger: ACTCAAACAGGTTCGAATTCAAGGGCTGACAGGGAA...AGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp CTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGTAGGTCCGATGCAATaGCAGCCAATCCTGAACTTT +
Preference number: 4 (lower is better)
Translates to: LWAVRRQDAAILSHTPSDVGPMQ*QPILNF
Trigger: AAAGTTCAGGATTGGCTGTCATTGCATCGGACCTAC...ATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTACACGTTGCTGCTGCTaGTGTCCGGCCAGCGCGTTA +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTTRCCC*CPASAL
Trigger: TAACGCGCTGGCCGGACATCAGCAGCAGCAACGTGT...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCGTGAATCGACTCATGTaGCATAGTGAAGGTTACAGC +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPVNRLM*HSEGYS
Trigger: GCTGTAACCTTCACTATGTCACATGAGTCGATTCAC...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp AAAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGACAAATGCAATCGGTaGATCGACTCATGTGACATA +
Preference number: 4 (lower is better)
Translates to: KDPRVACPSGLRFHQSPTDKCNR*IDSCDI
Trigger: TATGTCACATGAGTCGATTCACCGATTGCATTTGTC...TGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp AAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGTTGTTGTTAGGACAGTaGTTCATTCCCCAACTCAAA +
Preference number: 4 (lower is better)
Translates to: KTRAWRVPQGCVSTSHQQLLLGQ*FIPQLK
Trigger: TTTGAGTTGGGGAATGAATCACTGTCCTAACAACAA...CTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCCATTCATTCCTTAAATaGGCCACTGATGTGCATGGC +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPHSFLK*ATDVHG
Trigger: GCCATGCACATCAGTGGCTCATTTAAGGAATGAATG...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp CTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGCTTGGAATTTTTCCTaGGGGACTTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LWAVRRQDAAILSHTPSDAWNFS*GTCVCV
Trigger: CACACACACACAAGTCCCTCAGGAAAAATTCCAAGC...ATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR GCA 90 bp AGGTCCGATGCAATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGGTGAGGAGGACGGGCTaGCTCCCTCTCCTACAGTCC +
Preference number: 4 (lower is better)
Translates to: RSDAMTANPELCLIAVPVVRRTG*LPLLQS
Trigger: GGACTGTAGGAGAGGGAGGCAGCCCGTCCTCCTCAC...CACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATTGCATCGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR GCA 90 bp GTGCATGGCTTTGGGCCACTGCTCACTCATATGGCTCTTAACACCTTCTCCTCCCACCTATTTGCACGCTaGTCGGAAAGGCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: VHGFGPLLTHMALNTFSSHLFAR*SERLPW
Trigger: CCATGGGAGCCTTTCCGAGCAGCGTGCAAATAGGTG...GGAGGAGAAGGTGTTAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCATGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp AAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGCCAGATTTTTGTGTCTaGATCCCTTGCTCCATATTT +
Preference number: 4 (lower is better)
Translates to: KTRAWRVPQGCVSTSHQQPDFCV*IPCSIF
Trigger: AAATATGGAGCAAGGGATGCAGACACAAAAATCTGG...CTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp CAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCAGGAGAAAGGCAAATTTaGCCTTGGATTTGCGGACAC +
Preference number: 4 (lower is better)
Translates to: QCVQPLGSQASRRGHSLPGERQI*PWICGH
Trigger: GTGTCCGCAAATCCAAGGGCAAATTTGCCTTTCTCC...TGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp CATTGCCAAGCCCAAGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTGCTAGACGCCTGCTACATTaGTCAGGCTCAAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: HCQAQAANQNVEDACYIARRLLH*SGSRHS
Trigger: CGAGTGCCTTGAGCCTGAGCAATGTAGCAGGCGTCT...AGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCTTGGGCTTGGCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525942.1
CDS-3UTR GCA 90 bp AGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTCATTCTCTTCGCTTCTaGCCTGGACTTGTAACAGAA +
Preference number: 4 (lower is better)
Translates to: SLWAVRRQDAAILSHTPSHSLRF*PGLVTE
Trigger: TTCTGTTACAAGTCCAGGGCAGAAGCGAAGAGAATG...ACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp TCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGAGGCACTGTGCTGGGTaGTGGGGATACAACTGTGAA +
Preference number: 4 (lower is better)
Translates to: SDCSSSVYSLWAVRRQDARHCAG*WGYNCE
Trigger: TTCACAGTTGTATCCCCAGCACCCAGCACAGTGCCT...CGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGCAATCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR CCA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTCCAGCGCCCCTCTCTTaGTTTTCCTGGCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: REELRTEEIVYAVLHVLLPAPLS*FSWHLC
Trigger: GCAGAGGTGCCAGGAAAACCAAGAGAGGGGCGCTGG...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000393127.6
CDS-3UTR CCA 90 bp GTGCATGGCTTTGGGCCACTGCTCACTCATATGGCTCTTAACACCTTCTCCTCCGCTCCGGAGCCAGTCTaGTGTCAGGTTTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VHGFGPLLTHMALNTFSSAPEPV*CQVFPS
Trigger: AGAAGGGAAAACCTGACACCAGACTGGCTCCGGAGC...GGAGGAGAAGGTGTTAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCATGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000393127.6
CDS-3UTR CCA 90 bp AAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGGTCATTGCCAAGAGTTaGTACATCTTGAATCAAGAC +
Preference number: 4 (lower is better)
Translates to: KTRAWRVPQGCVSTSHQQVIAKS*YILNQD
Trigger: GTCTTGATTCAAGATGTACCAACTCTTGGCAATGAC...CTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTTGGGAGGCTGGTCGCTaGGTCCTTCCTTTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTWEAGR*VLPFRP
Trigger: AGGACGGAAAGGAAGGACCCAGCGACCAGCCTCCCA...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp GCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCAGTGGGAGGCTGGTCGCTaGGTCCTTCCTTTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: ANPELCLIAVPVCTAFGQWEAGR*VLPFRP
Trigger: AGGACGGAAAGGAAGGACCCAGCGACCAGCCTCCCA...CTGCCCAAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp CTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGACCTGAGAGGGATCTaGGTGAAATGTCACATCCTT +
Preference number: 4 (lower is better)
Translates to: LWAVRRQDAAILSHTPSDDLRGI*VKCHIL
Trigger: AAGGATGTGACATTTCACCCAGATCCCTCTCAGGTC...ATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCCTTCTGCACTTTCTATaGGAGAGACCATTCGCTCAA +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPLLHFL*ERPFAQ
Trigger: TTGAGCGAATGGTCTCTCCCATAGAAAGTGCAGAAG...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACAGGCAAATTTGCCCTTaGATTTGCGGACACGAGCTA +
Preference number: 4 (lower is better)
Translates to: CVQPLGSQASRRGHSLPHRQICP*ICGHEL
Trigger: TAGCTCGTGTCCGCAAATCCAAGGGCAAATTTGCCT...GTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp CATTGCCAAGCCCAAGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTGCTGTTTACAGGAGTTCTTaGAGTCACCTCCCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: HCQAQAANQNVEDACYIAVYRSS*SHLPRC
Trigger: GCAGCGGGGGAGGTGACTCCAAGAACTCCTGTAAAC...AGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCTTGGGCTTGGCAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525942.1
CDS-3UTR TCA 90 bp TCCGATGCAATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTATCCTTGCAGGTTCGTaGGGAGGACGGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SDAMTANPELCLIAVPVCILAGS*GGRAAS
Trigger: GGAGGCAGCCCGTCCTCCTCACGAACCTGCAAGGAT...ACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATTGCATCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR TCA 90 bp ACCAGATCATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCAATCCTTGCAGGTTCGTaGGGAGGACGGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: TRSSAASTNRLKYISSTPILAGS*GGRAAS
Trigger: GGAGGCAGCCCGTCCTCCTCACGAACCTGCAAGGAT...TGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGATGATCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR TCA 90 bp AGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCCCTGGATACTCTCTCTaGTCTAGTTTCTTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: SSSVYSLWAVRRQDAAILPGYSL*SSFFQR
Trigger: TCGCTGGAAGAAACTAGATCAGAGAGAGTATCCAGG...GAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp TGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACGAATTCGAACCTGTTTaGGTGTCCTCTCCATGTCAA +
Preference number: 4 (lower is better)
Translates to: CVQPLGSQASRRGHSLPHEFEPV*VSSPCQ
Trigger: TTGACATGGAGAGGACACTCAAACAGGTTCGAATTC...GTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp CATTGCCAAGCCCAAGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTGCTAGACGCCTGCCTCACTaGGTTTCAAAACGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: HCQAQAANQNVEDACYIARRLPH*VSKRQG
Trigger: ACCTTGCCGTTTTGAAACTCAGTGAGGCAGGCGTCT...AGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCTTGGGCTTGGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525942.1
CDS-3UTR TCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCAGACAAAGGCCTTTCTaGGCAAGAACTTCACAGTTT +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPRQRPF*ARTSQF
Trigger: AAACTGTGAAGTTCTTGCTCAGAAAGGCCTTTGTCT...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp AGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCATGAAGGGGCTCATGTaGTCTTCTCAAGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SSSVYSLWAVRRQDAAILMKGLM*SSQELG
Trigger: TCCAAGCTCTTGAGAAGATCACATGAGCCCCTTCAT...GAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR TCA 90 bp AAAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACATGGAGTATTGAAGGATaGGTACAAGTTACTCAGGTA +
Preference number: 4 (lower is better)
Translates to: KDPRVACPSGLRFHQSPTWSIEG*VQVTQV
Trigger: TACCTGAGTAACTTGTACTCATCCTTCAATACTCCA...TGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCAGATATGTAAGGCGCTaGAGAATGAGGTCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPRYVRR*RMRSRY
Trigger: ATACCTTGACCTCATTCTGCAGCGCCTTACATATCT...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCATATAGCGCTGACATaGCAACCATTTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SSVYSLWAVRRQDAAILSHIALT*QPFCPA
Trigger: AGCAGGACAAAATGGTTGGCATGTCAGCGCTATATG...GGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp CATTGCCAAGCCCAAGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTGCTGGAACCCTTGGGCGTTaGTACTCCATAGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: HCQAQAANQNVEDACYIAGTLGR*YSIAFG
Trigger: TCCAAAGGCTATGGAGTAGCAACGCCCAAGGGTTCC...AGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCTTGGGCTTGGCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525942.1
CDS-3UTR GCA 90 bp GCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCAGCAAAGCCACCAGCATTaGCAAGCCCAAGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: ANPELCLIAVPVCTAFGQQSHQH*QAQAAN
Trigger: GTTGGCGGCTTGGGCTTGGCAATGCTGGTGGCTTTG...CTGCCCAAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp GTGCATGGCTTTGGGCCACTGCTCACTCATATGGCTCTTAACACCTTCTCCTCCAATGAGCCACTGATGTaGATGGCTTTGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: VHGFGPLLTHMALNTFSSNEPLM*MALGHC
Trigger: GCAGTGGCCCAAAGCCATGCACATCAGTGGCTCATT...GGAGGAGAAGGTGTTAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCATGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp CAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCAATGCAGTGCTCCATGTaGTGCTTTGGAGGTTCATTT +
Preference number: 4 (lower is better)
Translates to: QCVQPLGSQASRRGHSLPMQCSM*CFGGSF
Trigger: AAATGAACCTCCAAAGCAGCACATGGAGCACTGCAT...TGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR GCA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATAGCCTAGCCCTCTTCTaGCACTGGGCTGCGCGCGGG +
Preference number: 4 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNSLALF*HWAARG
Trigger: CCCGCGCGCAGCCCAGTGGCAGAAGAGGGCTAGGCT...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393125.6
CDS-3UTR CCA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGCAGAGGGACCGACTCTaGGGATGGGCACCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMQRDRL*GWAPPA
Trigger: CGCTGGGGGTGCCCATCCCCAGAGTCGGTCCCTCTG...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000393127.6
CDS-3UTR CCA 90 bp TCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGGATAATCTGGAGCTTCCGACGCATTaGGGCTGGTGTTATGAAGAA +
Preference number: 4 (lower is better)
Translates to: SGVKTRPFSPTLPVMDNLELPTH*GWCYEE
Trigger: TTCTTCATAACACCAGCCCCAATGCGTCGGAAGCTC...CAGATTATCCATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp CCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACTCCTCTAGAATACTaGGAACAGAAGGCGTTTGTT +
Preference number: 4 (lower is better)
Translates to: PVCTAFGQSGVKTRPFSPTPLEY*EQKAFV
Trigger: AACAAACGCCTTCTGTTCCCAGTATTCTAGAGGAGT...GGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp GTGCATGGCTTTGGGCCACTGCTCACTCATATGGCTCTTAACACCTTCTCCTCCTTCCTTTCCGTCCTCTaGCTCTTCTGTGTGCCACTC +
Preference number: 4 (lower is better)
Translates to: VHGFGPLLTHMALNTFSSFLSVL*LFCVPL
Trigger: GAGTGGCACACAGAAGAGCCAGAGGACGGAAAGGAA...GGAGGAGAAGGTGTTAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCATGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACCACTGCTCACTCATATaGCTCTTAACACCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CVQPLGSQASRRGHSLPHHCSLI*LLTPSP
Trigger: AGGAGAAGGTGTTAAGAGCCATATGAGTGAGCAGTG...GTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR TCA 90 bp TACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCTTGGGGCTGGTGTTATaGAGAAAAATTGCTAATCGA +
Preference number: 4 (lower is better)
Translates to: YSLWAVRRQDAAILSHTPLGLVL*RKIANR
Trigger: TCGATTAGCAATTTTTCTTCATAACACCAGCCCCAA...GGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp TCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGGATAATCTGCCTGGATACTCTCTCTaGTCTAGTTTCTTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: SGVKTRPFSPTLPVMDNLPGYSL*SSFFQR
Trigger: TCGCTGGAAGAAACTAGATCAGAGAGAGTATCCAGG...CAGATTATCCATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp TCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGGATAATCTGTTCCCTGTCAGCCCTTaGATTCGAACCTGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: SGVKTRPFSPTLPVMDNLFPVSP*IRTCLS
Trigger: ACTCAAACAGGTTCGAATTCAAGGGCTGACAGGGAA...CAGATTATCCATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp CTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATCATCCATTGTGTAATTaGCTCTACGTCCATAGTGGT +
Preference number: 4 (lower is better)
Translates to: LWAVRRQDAAILSHTPSDHPLCN*LYVHSG
Trigger: ACCACTATGGACGTAGAGTCAATTACACAATGGATG...ATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp GCAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCAATGACAGCCAATCCTaGACTTTGTCTGATTGCAGT +
Preference number: 4 (lower is better)
Translates to: AVPVCTAFGQSGVKTRPFNDSQS*TLSDCS
Trigger: ACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATT...GAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp TGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACAGACAAAGGCCTTTCTaGGCAAGAACTTCACAGTTT +
Preference number: 4 (lower is better)
Translates to: CVQPLGSQASRRGHSLPHRQRPF*ARTSQF
Trigger: AAACTGTGAAGTTCTTGCTCAGAAAGGCCTTTGTCT...GTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR TCA 90 bp CAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCAGACAAATGCAATCGGTaGATCGACTCATGTGACATA +
Preference number: 4 (lower is better)
Translates to: QCVQPLGSQASRRGHSLPDKCNR*IDSCDI
Trigger: TATGTCACATGAGTCGATTCACCGATTGCATTTGTC...TGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR GCA 90 bp TTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTGGACTACCGTTTTCAACCCCACGGGCCAGGTCTaGAAGCCCCAATCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: FIMNEVEGYHRSWTTVFNPTGQV*KPQSGA
Trigger: AGCCCCCGATTGGGGCTTGCAGACCTGGCCCGTGGG...GTTGAAAACGGTAGTCCAGGACCTATGATATCCCTCCACTTCATTCATTATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393125.6
CDS-3UTR GCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTCACCTATTTGCACGCTaGTCGGAAAGGCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTHLFAR*SERLPW
Trigger: CCATGGGAGCCTTTCCGAGCAGCGTGCAAATAGGTG...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCAGATATGTAAGGCGCTaGAGAATGAGGTCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: SSVYSLWAVRRQDAAILSRYVRR*RMRSRY
Trigger: ATACCTTGACCTCATTCTGCAGCGCCTTACATATCT...GGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp TGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCTGGCTCTTCTGTGTaGCACTCATATGGACTAAAT +
Preference number: 4 (lower is better)
Translates to: CVQPLGSQASRRGHSLPHSGSSV*HSYGLN
Trigger: ATTTAGTCCATATGAGTGGCACACAGAAGAGCCAGA...GTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp TCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGGATAATCTGTTTGGCCAGGTCTTCTaGACTTTCTATGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: SGVKTRPFSPTLPVMDNLFGQVF*TFYGRD
Trigger: GTCTCTCCCATAGAAAGTGCAGAAGACCTGGCCAAA...CAGATTATCCATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp TCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGGAGAAAGGCAAATTTaGCCTTGGATTTGCGGACAC +
Preference number: 4 (lower is better)
Translates to: SDCSSSVYSLWAVRRQDAGERQI*PWICGH
Trigger: GTGTCCGCAAATCCAAGGGCAAATTTGCCTTTCTCC...CGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGCAATCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp CAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCATTCTCTTCGCTTCTaGCCTGGACTTGTAACAGAA +
Preference number: 4 (lower is better)
Translates to: QFQCVQPLGSQASRRGHSHSLRF*PGLVTE
Trigger: TTCTGTTACAAGTCCAGGGCAGAAGCGAAGAGAATG...AGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp CAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGAAATTCTGGGTATTCTaGGAGGAAGTTGGGTTAAAA +
Preference number: 4 (lower is better)
Translates to: QPLGSQASRRGHSLPHSQKFWVF*EEVGLK
Trigger: TTTTAACCCAACTTCCTCGCAGAATACCCAGAATTT...CTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp ATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCACCACTCCCTCGGAAAGGCTCCCATaGCGAGTCCCCAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: ICSVNQPTQIYILHTTTPSERLP*RVPKIQ
Trigger: CTGGATTTTGGGGACTCGCCATGGGAGCCTTTCCGA...GGGAGTGGTGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR CCA 90 bp AGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCCCGACGCATTGGGGCTaGTGTTATGAAGAAAAATTG +
Preference number: 4 (lower is better)
Translates to: SSSVYSLWAVRRQDAAILPTHWG*CYEEKL
Trigger: CAATTTTTCTTCATAACACCAGCCCCAATGCGTCGG...GAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp GGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGGATTTACAGCAAAACTGTTaGCTGTCTCAATGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GQSGVKTRPFSPTLPVMDLQQNC*LSQCCP
Trigger: TGGACAACATTGAGACAGCCAACAGTTTTGCTGTAA...ATCCATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp TGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACACTCCTCTAGAATACTaGGAACAGAAGGCGTTTGTT +
Preference number: 4 (lower is better)
Translates to: CVQPLGSQASRRGHSLPHTPLEY*EQKAFV
Trigger: AACAAACGCCTTCTGTTCCCAGTATTCTAGAGGAGT...GTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp AAAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACATTAAAATCCACCAACTaGAATCCAGTAACATTGGCT +
Preference number: 4 (lower is better)
Translates to: KDPRVACPSGLRFHQSPTLKSTN*NPVTLA
Trigger: AGCCAATGTTACTGGATTCCAGTTGGTGGATTTTAA...TGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCGTCATTGCCAAGAGTTaGTACATCTTGAATCAAGAC +
Preference number: 4 (lower is better)
Translates to: YSLWAVRRQDAAILSHTPVIAKS*YILNQD
Trigger: GTCTTGATTCAAGATGTACCAACTCTTGGCAATGAC...GGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp GTGCATGGCTTTGGGCCACTGCTCACTCATATGGCTCTTAACACCTTCTCCTCCTCTCAGCCAAAGGATTaGTTTAGCAAAGACCCGCGC +
Preference number: 4 (lower is better)
Translates to: VHGFGPLLTHMALNTFSSSQPKD*FSKDPR
Trigger: GCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGA...GGAGGAGAAGGTGTTAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCATGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp AGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCAAAGCAGTGTATTCCTaGTCTGTGTTTCGGATGAAG +
Preference number: 4 (lower is better)
Translates to: SSSVYSLWAVRRQDAAILKAVYS*SVFRMK
Trigger: CTTCATCCGAAACACAGATCAGGAATACACTGCTTT...GAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTAGACGCCTGCCTCACTaGGTTTCAAAACGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTRRLPH*VSKRQG
Trigger: ACCTTGCCGTTTTGAAACTCAGTGAGGCAGGCGTCT...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000530497.1
CDS-3UTR TCA 90 bp AGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCATCCTGAACTTTGTCTaGTTGCAGTTCCAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: SSSVYSLWAVRRQDAAILILNFV*LQFQCV
Trigger: TACACACTGGAACTGCAATCAGACAAAGTTCAGGAT...GAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTACACGTTGCTGCTGCTaGTGTCCGGCCAGCGCGTTA +
Preference number: 4 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMATRCCC*CPASAL
Trigger: TAACGCGCTGGCCGGACATCAGCAGCAGCAACGTGT...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp GTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTTGGGATCTTGAGAGTTaGTGGAAGAAAATCAATCCT +
Preference number: 4 (lower is better)
Translates to: VYSLWAVRRQDAAILSHTWDLES*WKKINP
Trigger: AGGATTGATTTTCTTCCATCAACTCTCAAGATCCCA...AGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR TCA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCATTCAGTTGGAGTATTaGAGGATGAGTACAAGTTAC +
Preference number: 4 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPIQLEY*RMSTSY
Trigger: GTAACTTGTACTCATCCTTCAATACTCCAACTGAAT...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGGTGAGGAGGACGGGCTaGCTCCCTCTCCTACAGTCC +
Preference number: 4 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMVRRTG*LPLLQS
Trigger: GGACTGTAGGAGAGGGAGGCAGCCCGTCCTCCTCAC...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000393127.6
CDS-3UTR GCA 90 bp ACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATTGTGTGGAATAATAGATAAACCCACGGGCCAGGTCTaGAAGCCCCAATCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: TALGEVTRLVSLCGIIDKPTGQV*KPQSGA
Trigger: AGCCCCCGATTGGGGCTTGCAGACCTGGCCCGTGGG...TTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR GCA 90 bp ACCAGATCATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCATTTTCCTGGCACCTCTaGTTCTCGGCTGCGCTAGGC +
Preference number: 4 (lower is better)
Translates to: TRSSAASTNRLKYISSTPFSWHL*FSAALG
Trigger: GCCTAGCGCAGCCGAGAAGCAGAGGTGCCAGGAAAA...TGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGATGATCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR GCA 90 bp TACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCCTTGAATCCCAAGTTTaGAATGATATAATGGTAGCC +
Preference number: 4 (lower is better)
Translates to: YSLWAVRRQDAAILSHTPLESQV*NDIMVA
Trigger: GGCTACCATTATATCATTGCAAACTTGGGATTCAAG...GGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp AGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGAGATATCAATTTTCTaGCTCCTAAGACTTCGGAAA +
Preference number: 4 (lower is better)
Translates to: SLWAVRRQDAAILSHTPSEISIF*LLRLRK
Trigger: TTTCCGAAGTCTTAGGAGGCAGAAAATTGATATCTC...ACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp TGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGATTTTTGTGTCTaGATCCCTTGCTCCATATTT +
Preference number: 4 (lower is better)
Translates to: CTAFGQSGVKTRPFSPTLPDFCV*IPCSIF
Trigger: AAATATGGAGCAAGGGATGCAGACACAAAAATCTGG...GAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp GTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTGGCAATAGCAATCTCTaGTTTCCCATAAACAAGTTC +
Preference number: 4 (lower is better)
Translates to: VYSLWAVRRQDAAILSHTGNSNL*FPINKF
Trigger: GAACTTGTTTATGGGAAAGCAGAGATTGCTATTGCC...AGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp CATTGCCAAGCCCAAGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTGCTGGAGAAAGGCAAATTTaGCCTTGGATTTGCGGACAC +
Preference number: 4 (lower is better)
Translates to: HCQAQAANQNVEDACYIAGERQI*PWICGH
Trigger: GTGTCCGCAAATCCAAGGGCAAATTTGCCTTTCTCC...AGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCTTGGGCTTGGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525942.1
CDS-3UTR GCA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGCAAAGCCACCAGCATTaGCAAGCCCAAGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: WIEVREVLEEISKRQVMKQSHQH*QAQAAN
Trigger: GTTGGCGGCTTGGGCTTGGCAATGCTGGTGGCTTTG...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGCGTGTCCCTCAGGGCTaGGTTTCCACCAGTCACCAA +
Preference number: 4 (lower is better)
Translates to: WIEVREVLEEISKRQVMKRVPQG*VSTSHQ
Trigger: TTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACG...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTCTCTCTTGGTTTTCCTaGCACCTCTGCTTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: REELRTEEIVYAVLHVLLLSWFS*HLCFSA
Trigger: AGCCGAGAAGCAGAGGTGCCAGGAAAACCAAGAGAG...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000393127.6
CDS-3UTR CCA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCGCTCCGGAGCCAGTCTaGTGTCAGGTTTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFAPEPV*CQVFPS
Trigger: AGAAGGGAAAACCTGACACCAGACTGGCTCCGGAGC...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000393127.6
CDS-3UTR CCA 90 bp TACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCTTAAAATCCACCAACTaGAATCCAGTAACATTGGCT +
Preference number: 4 (lower is better)
Translates to: YSLWAVRRQDAAILSHTPLKSTN*NPVTLA
Trigger: AGCCAATGTTACTGGATTCCAGTTGGTGGATTTTAA...GGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp ACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGTCCATGTCAATTCCCTaGCCCCATGGAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TANPELCLIAVPVCTAFGSMSIP*PHGAAG
Trigger: TCCTGCTGCTCCATGGGGCCAGGGAATTGACATGGA...CCCAAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTTTCCTTTCCGTCCTCTaGCTCTTCTGTGTGCCACTC +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTFLSVL*LFCVPL
Trigger: GAGTGGCACACAGAAGAGCCAGAGGACGGAAAGGAA...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTTGGGAGGCTGGTCGCTaGGTCCTTCCTTTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMAWEAGR*VLPFRP
Trigger: AGGACGGAAAGGAAGGACCCAGCGACCAGCCTCCCA...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTAACTCATTGGGAGGCTaGTCGCTGGGTCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RSERSPGRNKQAPGHEGANSLGG*SLGPSF
Trigger: AAAGGAAGGACCCAGCGACCAGCCTCCCAATGAGTT...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp CATTGCCAAGCCCAAGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTGCTAGGCAAATTTGCCCTTaGATTTGCGGACACGAGCTA +
Preference number: 4 (lower is better)
Translates to: HCQAQAANQNVEDACYIARQICP*ICGHEL
Trigger: TAGCTCGTGTCCGCAAATCCAAGGGCAAATTTGCCT...AGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCTTGGGCTTGGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525942.1
CDS-3UTR CCA 90 bp CATTGCCAAGCCCAAGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTGCTTTAATGAGGAACCCTTaGGCGTTGCTACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: HCQAQAANQNVEDACYIALMRNP*ALLLHS
Trigger: GCTATGGAGTAGCAACGCCCAAGGGTTCCTCATTAA...AGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCTTGGGCTTGGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525942.1
CDS-3UTR TCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTATCCTTGCAGGTTCGTaGGGAGGACGGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFILAGS*GGRAAS
Trigger: GGAGGCAGCCCGTCCTCCTCACGAACCTGCAAGGAT...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000393127.6
CDS-3UTR TCA 90 bp TCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCAGAGTTGGTACATCTTaGATCAAGACTAACTTATCC +
Preference number: 4 (lower is better)
Translates to: SSVYSLWAVRRQDAAILSRVGTS*IKTNLS
Trigger: GGATAAGTTAGTCTTGATTCAAGATGTACCAACTCT...GGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTCTCCCACACTCCCAGTaGTGGATAATCTGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTLPHSQ*WIIWLC
Trigger: ACAAAGCCAGATTATCCATCACTGGGAGTGTGGGAG...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTCTCCCACACTCCCAGTaGTGGATAATCTGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: REELRTEEIVYAVLHVLLLPHSQ*WIIWLC
Trigger: ACAAAGCCAGATTATCCATCACTGGGAGTGTGGGAG...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp GCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCAGCTCCCACACTCCCAGTaGTGGATAATCTGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: ANPELCLIAVPVCTAFGQLPHSQ*WIIWLC
Trigger: ACAAAGCCAGATTATCCATCACTGGGAGTGTGGGAG...CTGCCCAAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp TCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGATCCTGAACTTTGTCTaGTTGCAGTTCCAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: SDCSSSVYSLWAVRRQDAILNFV*LQFQCV
Trigger: TACACACTGGAACTGCAATCAGACAAAGTTCAGGAT...CGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGCAATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTCTGCAGCACAGAGATTaGATGGCGAATGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: RSERSPGRNKQAPGHEGALQHRD*MANGIL
Trigger: CAAGATCCCATTCGCCATTCAATCTCTGTGCTGCAG...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp ACCAGATCATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCACAGGGCAGCCTCAAGTaGCATCACCAGATCATCTGC +
Preference number: 4 (lower is better)
Translates to: TRSSAASTNRLKYISSTPQGSLK*HHQIIC
Trigger: GCAGATGATCTGGTGATGTCACTTGAGGCTGCCCTG...TGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGATGATCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR GCA 90 bp ATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCACCACTCCCAAGAGACCACCTATTTaGACGCTGCTCGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: ICSVNQPTQIYILHTTTPKRPPI*TLLGKA
Trigger: AGCCTTTCCGAGCAGCGTGCAAATAGGTGGTCTCTT...GGGAGTGGTGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR GCA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTAAGAGACCACCTATTTaGACGCTGCTCGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: REELRTEEIVYAVLHVLLKRPPI*TLLGKA
Trigger: AGCCTTTCCGAGCAGCGTGCAAATAGGTGGTCTCTT...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGAGATATGTAAGGCGCTaGAGAATGAGGTCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: SDCSSSVYSLWAVRRQDARYVRR*RMRSRY
Trigger: ATACCTTGACCTCATTCTGCAGCGCCTTACATATCT...CGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGCAATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp CTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCAGATTTTTGTGTCTaGATCCCTTGCTCCATATTT +
Preference number: 4 (lower is better)
Translates to: LIAVPVCTAFGQSGVKTRPDFCV*IPCSIF
Trigger: AAATATGGAGCAAGGGATGCAGACACAAAAATCTGG...CCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGCAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTATTTGCCCTTGGATTTaGGGACACGAGCTACTCCCT +
Preference number: 4 (lower is better)
Translates to: REELRTEEIVYAVLHVLLICPWI*GHELLP
Trigger: AGGGAGTAGCTCGTGTCCGCAAATCCAAGGGCAAAT...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTATTTGCCCTTGGATTTaGGGACACGAGCTACTCCCT +
Preference number: 4 (lower is better)
Translates to: RSERSPGRNKQAPGHEGAICPWI*GHELLP
Trigger: AGGGAGTAGCTCGTGTCCGCAAATCCAAGGGCAAAT...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCTCACATGGCTTTCGCTaGTCAATGTATTCATTCATA +
Preference number: 4 (lower is better)
Translates to: CTAFGQSGVKTRPFSPTLSHGFR*SMYSFI
Trigger: TATGAATGAATACATTGAGCAGCGAAAGCCATGTGA...GAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp TTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGTCACATGGCTTTCGCTaGTCAATGTATTCATTCATA +
Preference number: 4 (lower is better)
Translates to: FGQSGVKTRPFSPTLPVMSHGFR*SMYSFI
Trigger: TATGAATGAATACATTGAGCAGCGAAAGCCATGTGA...CATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTCAAAGCCACCAGCATTaGCAAGCCCAAGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMAQSHQH*QAQAAN
Trigger: GTTGGCGGCTTGGGCTTGGCAATGCTGGTGGCTTTG...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTGATAGACACAGTCCCTaGCCTCAAGGAGCTTACAGT +
Preference number: 4 (lower is better)
Translates to: REELRTEEIVYAVLHVLLDRHSP*PQGAYS
Trigger: ACTGTAAGCTCCTTGAGGGCAGGGACTGTGTCTATC...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCCTTCTGCCACTGGGCTaGGCGCGGGGGACTCCGGTC +
Preference number: 4 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILLLPLG*ARGTPV
Trigger: GACCGGAGTCCCCCGCGCGCAGCCCAGTGGCAGAAG...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393125.6
CDS-3UTR CCA 90 bp TATCTACAAGGGATTTCTTTCATAATGAATGAAGTGGAGGGATATCATAGGTCCCAGAGGGACCGACTCTaGGGATGGGCACCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: YLQGISFIMNEVEGYHRSQRDRL*GWAPPA
Trigger: CGCTGGGGGTGCCCATCCCCAGAGTCGGTCCCTCTG...GGACCTATGATATCCCTCCACTTCATTCATTATGAAAGAAATCCCTTGTAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393125.6
CDS-3UTR CCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTGAGCTTCCGACGCATTaGGGCTGGTGTTATGAAGAA +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTELPTH*GWCYEE
Trigger: TTCTTCATAACACCAGCCCCAATGCGTCGGAAGCTC...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp AGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTTACAGCAAAACTGTTaGCTGTCTCAATGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SSSVYSLWAVRRQDAAILLQQNC*LSQCCP
Trigger: TGGACAACATTGAGACAGCCAACAGTTTTGCTGTAA...GAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp TCCGATGCAATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTAGTTGCAGCACAAACTaGCTCTCCCCCTCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: SDAMTANPELCLIAVPVCSCSTN*LSPSVG
Trigger: CCCTACTGAGGGGGAGAGCCAGTTTGTGCTGCAACT...ACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATTGCATCGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp CTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGTTTTCCATAATAGCTTaGAGTATCGAGTATCCCCTG +
Preference number: 4 (lower is better)
Translates to: LIAVPVCTAFGQSGVKTRFSIIA*SIEYPL
Trigger: CAGGGGATACTCGATACTCCAAGCTATTATGGAAAA...CCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGCAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp TGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTTAAAATCCACCAACTaGAATCCAGTAACATTGGCT +
Preference number: 4 (lower is better)
Translates to: CVQPLGSQASRRGHSLPHLKSTN*NPVTLA
Trigger: AGCCAATGTTACTGGATTCCAGTTGGTGGATTTTAA...GTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp AGGTCCGATGCAATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGAACTCATTGGGAGGCTaGTCGCTGGGTCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RSDAMTANPELCLIAVPVNSLGG*SLGPSF
Trigger: AAAGGAAGGACCCAGCGACCAGCCTCCCAATGAGTT...CACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATTGCATCGGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp TTCCATCATTTACATACAGTGACCTCATTTCAAGATAGGGGAATTGATATGTCAGCCCTCTTCTGCCACTaGGCTGCGCGCGGGGGACTC +
Preference number: 4 (lower is better)
Translates to: FHHLHTVTSFQDRGIDMSALFCH*AARGGL
Trigger: GAGTCCCCCGCGCGCAGCCCAGTGGCAGAAGAGGGC...TGACATATCAATTCCCCTATCTTGAAATGAGGTCACTGTATGTAAATGATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393125.6
CDS-3UTR TCA 90 bp TTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGATCTGTGTTTCGGATaGAGAGACCACCTATTTGCA +
Preference number: 4 (lower is better)
Translates to: LSDCSSSVYSLWAVRRQDDLCFG*RDHLFA
Trigger: TGCAAATAGGTGGTCTCTTCATCCGAAACACAGATC...GTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGCAATCAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTGTAGGTCCGATGCAATaGCAGCCAATCCTGAACTTT +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTVGPMQ*QPILNF
Trigger: AAAGTTCAGGATTGGCTGTCATTGCATCGGACCTAC...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGTTTGGGTTTCCGAGCTaGGCTCATGCACACGTTGCT +
Preference number: 4 (lower is better)
Translates to: WIEVREVLEEISKRQVMKFGFPS*AHAHVA
Trigger: AGCAACGTGTGCATGAGCTCAGCTCGGAAACCCAAA...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTGCTTGGAATTTTTCCTaGGGGACTTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RSERSPGRNKQAPGHEGAAWNFS*GTCVCV
Trigger: CACACACACACAAGTCCCTCAGGAAAAATTCCAAGC...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTATGAAGGGGCTCATGTaGTCTTCTCAAGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: REELRTEEIVYAVLHVLLMKGLM*SSQELG
Trigger: TCCAAGCTCTTGAGAAGATCACATGAGCCCCTTCAT...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp ATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCACCACTCCCTCTTACGGCATTAGGTaGGGTCACCCGTTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: ICSVNQPTQIYILHTTTPSYGIR*GHPFSF
Trigger: GAAACTAAACGGGTGACCTCACCTAATGCCGTAAGA...GGGAGTGGTGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR TCA 90 bp ATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCACCACTCCCTATACAGTGTCCTGGTaGGAGTGGGAGGAATTGTAC +
Preference number: 4 (lower is better)
Translates to: ICSVNQPTQIYILHTTTPYTVSW*EWEELY
Trigger: GTACAATTCCTCCCACTCTCACCAGGACACTGTATA...GGGAGTGGTGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR GCA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCAAGAGACCACCTATTTaGACGCTGCTCGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFKRPPI*TLLGKA
Trigger: AGCCTTTCCGAGCAGCGTGCAAATAGGTGGTCTCTT...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTAACGAAGGTCTTAGTTaGAGCACAAACTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: REELRTEEIVYAVLHVLLNEGLS*STNWLS
Trigger: GGAGAGCCAGTTTGTGCTGCAACTAAGACCTTCGTT...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTAACGAAGGTCTTAGTTaGAGCACAAACTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTNEGLS*STNWLS
Trigger: GGAGAGCCAGTTTGTGCTGCAACTAAGACCTTCGTT...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp CTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCAACCATTTTGTCCTaGTTTTTCCATAATAGCTTG +
Preference number: 4 (lower is better)
Translates to: LIAVPVCTAFGQSGVKTRPTILS*FFHNSL
Trigger: CAAGCTATTATGGAAAAAGCAGGACAAAATGGTTGG...CCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGCAATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp AGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCCTTGAATCCCAAGTTTaGAATGATATAATGGTAGCC +
Preference number: 4 (lower is better)
Translates to: SSSVYSLWAVRRQDAAILLESQV*NDIMVA
Trigger: GGCTACCATTATATCATTGCAAACTTGGGATTCAAG...GAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTTTTGGCCAGGTCTTCTaGACTTTCTATGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTFGQVF*TFYGRD
Trigger: GTCTCTCCCATAGAAAGTGCAGAAGACCTGGCCAAA...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp AGGTCCGATGCAATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGATTTGCCCTTGGATTTaGGGACACGAGCTACTCCCT +
Preference number: 4 (lower is better)
Translates to: RSDAMTANPELCLIAVPVICPWI*GHELLP
Trigger: AGGGAGTAGCTCGTGTCCGCAAATCCAAGGGCAAAT...CACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATTGCATCGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTATGGCTTTGGGCCACTaGTCACTCATATGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: RSERSPGRNKQAPGHEGAMALGH*SLIWLL
Trigger: TAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCAT...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGCCTCTCCTACAGTCCTaGCTTCCCTCTCAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMPLLQS*LPSQPS
Trigger: GCTAGGCTGAGAGGGAAGCCAGGACTGTAGGAGAGG...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000393127.6
CDS-3UTR CCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTCCAGCGCCCCTCTCTTaGTTTTCCTGGCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFPAPLS*FSWHLC
Trigger: GCAGAGGTGCCAGGAAAACCAAGAGAGGGGCGCTGG...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000393127.6
CDS-3UTR CCA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTAGGCAAATTTGCCCTTaGATTTGCGGACACGAGCTA +
Preference number: 4 (lower is better)
Translates to: REELRTEEIVYAVLHVLLRQICP*ICGHEL
Trigger: TAGCTCGTGTCCGCAAATCCAAGGGCAAATTTGCCT...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTTTAATGAGGAACCCTTaGGCGTTGCTACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: RSERSPGRNKQAPGHEGALMRNP*ALLLHS
Trigger: GCTATGGAGTAGCAACGCCCAAGGGTTCCTCATTAA...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCCACTGTGCTGGGTGCTaGGGATACAACTGTGAACAA +
Preference number: 4 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFHCAGC*GYNCEQ
Trigger: TTGTTCACAGTTGTATCCCCAGCACCCAGCACAGTG...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTGTGAATCGACTCATGTaGCATAGTGAAGGTTACAGC +
Preference number: 4 (lower is better)
Translates to: REELRTEEIVYAVLHVLLVNRLM*HSEGYS
Trigger: GCTGTAACCTTCACTATGTCACATGAGTCGATTCAC...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTCAAGGCCAGACTTCTaGAATCATCCTAACTTGTGC +
Preference number: 4 (lower is better)
Translates to: REELRTEEIVYAVLHVLLSRPDF*NHPNLC
Trigger: GCACAAGTTAGGATGATTTCAGAAGTCTGGCCTTGA...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTTCAAGGCCAGACTTCTaGAATCATCCTAACTTGTGC +
Preference number: 4 (lower is better)
Translates to: RSERSPGRNKQAPGHEGASRPDF*NHPNLC
Trigger: GCACAAGTTAGGATGATTTCAGAAGTCTGGCCTTGA...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp ACCAGATCATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCAGATGGGAGCCTAATGTaGTTTGGCATCGAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: TRSSAASTNRLKYISSTPDGSLM*FGIEVR
Trigger: CCTTACCTCGATGCCAAATCACATTAGGCTCCCATC...TGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGATGATCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR GCA 90 bp TATCTACAAGGGATTTCTTTCATAATGAATGAAGTGGAGGGATATCATAGGTCCCCCCTGCCGCATCCTTaGAGGTTCGTGAGGAGGACG +
Preference number: 4 (lower is better)
Translates to: YLQGISFIMNEVEGYHRSPLPHP*RFVRRT
Trigger: CGTCCTCCTCACGAACCTGCAAGGATGCGGCAGGGG...GGACCTATGATATCCCTCCACTTCATTCATTATGAAAGAAATCCCTTGTAGATA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000393125.6
CDS-3UTR GCA 90 bp TCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGGATAATCTGGAGATATCAATTTTCTaGCTCCTAAGACTTCGGAAA +
Preference number: 4 (lower is better)
Translates to: SGVKTRPFSPTLPVMDNLEISIF*LLRLRK
Trigger: TTTCCGAAGTCTTAGGAGGCAGAAAATTGATATCTC...CAGATTATCCATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTTGTGTCTGCATCCCTTaGTCCATATTTTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: RSERSPGRNKQAPGHEGACVCIP*SIFSIR
Trigger: CCTGATGGAAAATATGGAGCAAGGGATGCAGACACA...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCGGAGAAAGGCAAATTTaGCCTTGGATTTGCGGACAC +
Preference number: 4 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFGERQI*PWICGH
Trigger: GTGTCCGCAAATCCAAGGGCAAATTTGCCTTTCTCC...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTCACTCGTCTTGTCCTTaGTTCCAGAGTCCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMAHSSCP*FQSPWV
Trigger: GACCCAAGGACTCTGGAAGCAAGGACAAGACGAGTG...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000530497.1
CDS-3UTR GCA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGAGACGCCTGCTACATTaGTCAGGCTCAAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMRRLLH*SGSRHS
Trigger: CGAGTGCCTTGAGCCTGAGCAATGTAGCAGGCGTCT...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTCGTGTCCCTCAGGGCTaGGTTTCCACCAGTCACCAA +
Preference number: 4 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFRVPQG*VSTSHQ
Trigger: TTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACG...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCATGGCTTTGGGCCACTaGTCACTCATATGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFMALGH*SLIWLL
Trigger: TAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCAT...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTATGCAGTGCTCCATGTaGTGCTTTGGAGGTTCATTT +
Preference number: 4 (lower is better)
Translates to: RSERSPGRNKQAPGHEGAMQCSM*CFGGSF
Trigger: AAATGAACCTCCAAAGCAGCACATGGAGCACTGCAT...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGATAGACACAGTCCCTaGCCTCAAGGAGCTTACAGT +
Preference number: 4 (lower is better)
Translates to: WIEVREVLEEISKRQVMKDRHSP*PQGAYS
Trigger: ACTGTAAGCTCCTTGAGGGCAGGGACTGTGTCTATC...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp ACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATTGTGTGGAATAATAGATAAACCAGCGCCCCTCTCTTaGTTTTCCTGGCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: TALGEVTRLVSLCGIIDKPAPLS*FSWHLC
Trigger: GCAGAGGTGCCAGGAAAACCAAGAGAGGGGCGCTGG...TTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR CCA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCATCGGAAAGGCTCCCATaGCGAGTCCCCAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNASERLP*RVPKIQ
Trigger: CTGGATTTTGGGGACTCGCCATGGGAGCCTTTCCGA...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTCCGACGCATTGGGGCTaGTGTTATGAAGAAAAATTG +
Preference number: 4 (lower is better)
Translates to: RSERSPGRNKQAPGHEGAPTHWG*CYEEKL
Trigger: CAATTTTTCTTCATAACACCAGCCCCAATGCGTCGG...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCAAATTCCCTGGCCCCATaGAGCAGCAGGATTTGCCAG +
Preference number: 4 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNANSLAP*SSRICQ
Trigger: CTGGCAAATCCTGCTGCTCCATGGGGCCAGGGAATT...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTCTTCTGCACTTTCTATaGGAGAGACCATTCGCTCAA +
Preference number: 4 (lower is better)
Translates to: RSERSPGRNKQAPGHEGALLHFL*ERPFAQ
Trigger: TTGAGCGAATGGTCTCTCCCATAGAAAGTGCAGAAG...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTAGTGTGTACAGCCTTTaGGCAGTCAGGCGTCAAGAC +
Preference number: 4 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMASVYSL*AVRRQD
Trigger: GTCTTGACGCCTGACTGCCCAAAGGCTGTACACACT...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp ATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTAGTGTGTACAGCCTTTaGGCAGTCAGGCGTCAAGAC +
Preference number: 4 (lower is better)
Translates to: MTANPELCLIAVPVCTAFSVYSL*AVRRQD
Trigger: GTCTTGACGCCTGACTGCCCAAAGGCTGTACACACT...AAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTCTTCCATGGACTATATaGATGTTCTGGAGACACAGG +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTLPWTI*MFWRHR
Trigger: CCTGTGTCTCCAGAACATCCATATAGTCCATGGAAG...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCATCCTTGCAGGTTCGTaGGGAGGACGGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILILAGS*GGRAAS
Trigger: GGAGGCAGCCCGTCCTCCTCACGAACCTGCAAGGAT...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393125.6
CDS-3UTR TCA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCTGTTCAGAGAAGCATTaGAGACGATGGCGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: MFWRHRLACSRTSTTILSCSEKH*RRWRGA
Trigger: CGCTCCGCGCCATCGTCTTCAATGCTTCTCTGAACA...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000393127.6
CDS-3UTR TCA 90 bp GCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCAGAAAGCAGTGTATTCCTaGTCTGTGTTTCGGATGAAG +
Preference number: 4 (lower is better)
Translates to: ANPELCLIAVPVCTAFGQKAVYS*SVFRMK
Trigger: CTTCATCCGAAACACAGATCAGGAATACACTGCTTT...CTGCCCAAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp ATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCACCACTCCCAAAGCAGTGTATTCCTaGTCTGTGTTTCGGATGAAG +
Preference number: 4 (lower is better)
Translates to: ICSVNQPTQIYILHTTTPKAVYS*SVFRMK
Trigger: CTTCATCCGAAACACAGATCAGGAATACACTGCTTT...GGGAGTGGTGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR TCA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTAAAGCAGTGTATTCCTaGTCTGTGTTTCGGATGAAG +
Preference number: 4 (lower is better)
Translates to: REELRTEEIVYAVLHVLLKAVYS*SVFRMK
Trigger: CTTCATCCGAAACACAGATCAGGAATACACTGCTTT...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTCATCCATTGTGTAATTaGCTCTACGTCCATAGTGGT +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTHPLCN*LYVHSG
Trigger: ACCACTATGGACGTAGAGTCAATTACACAATGGATG...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGAGACGCCTGCCTCACTaGGTTTCAAAACGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMRRLPH*VSKRQG
Trigger: ACCTTGCCGTTTTGAAACTCAGTGAGGCAGGCGTCT...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000530497.1
CDS-3UTR TCA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGTAGGTCCGATGCAATaGCAGCCAATCCTGAACTTT +
Preference number: 4 (lower is better)
Translates to: WIEVREVLEEISKRQVMKVGPMQ*QPILNF
Trigger: AAAGTTCAGGATTGGCTGTCATTGCATCGGACCTAC...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TTATATCCAGTGCTCACTCTCAGCCTTCTATATCTAGATATAGGTATCACATATGTGAGGAGGACGGGCTaGCTCCCTCTCCTACAGTCC +
Preference number: 4 (lower is better)
Translates to: LYPVLTLSLLYLDIGITYVRRTG*LPLLQS
Trigger: GGACTGTAGGAGAGGGAGGCAGCCCGTCCTCCTCAC...ATATGTGATACCTATATCTAGATATAGAAGGCTGAGAGTGAGCACTGGATATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393125.6
CDS-3UTR GCA 90 bp AGGTCCGATGCAATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGCATATAGCGCTGACATaGCAACCATTTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RSDAMTANPELCLIAVPVHIALT*QPFCPA
Trigger: AGCAGGACAAAATGGTTGGCATGTCAGCGCTATATG...CACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATTGCATCGGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp GTGCATGGCTTTGGGCCACTGCTCACTCATATGGCTCTTAACACCTTCTCCTCCGAGATATCAATTTTCTaGCTCCTAAGACTTCGGAAA +
Preference number: 4 (lower is better)
Translates to: VHGFGPLLTHMALNTFSSEISIF*LLRLRK
Trigger: TTTCCGAAGTCTTAGGAGGCAGAAAATTGATATCTC...GGAGGAGAAGGTGTTAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCATGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTCTGGCTCTTCTGTGTaGCACTCATATGGACTAAAT +
Preference number: 4 (lower is better)
Translates to: REELRTEEIVYAVLHVLLSGSSV*HSYGLN
Trigger: ATTTAGTCCATATGAGTGGCACACAGAAGAGCCAGA...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp CATTGCCAAGCCCAAGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTGCTTCACATGGCTTTCGCTaGTCAATGTATTCATTCATA +
Preference number: 4 (lower is better)
Translates to: HCQAQAANQNVEDACYIASHGFR*SMYSFI
Trigger: TATGAATGAATACATTGAGCAGCGAAAGCCATGTGA...AGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCTTGGGCTTGGCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525942.1
CDS-3UTR CCA 90 bp ATCTACCCTTGGAAATGGAGTGATATAATTCCATCATTTACATACAGTGACCTCCCAGCGCCCCTCTCTTaGTTTTCCTGGCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: IYPWKWSDIIPSFTYSDLPAPLS*FSWHLC
Trigger: GCAGAGGTGCCAGGAAAACCAAGAGAGGGGCGCTGG...GAGGTCACTGTATGTAAATGATGGAATTATATCACTCCATTTCCAAGGGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393125.6
CDS-3UTR CCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTTCGGAAAGGCTCCCATaGCGAGTCCCCAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFSERLP*RVPKIQ
Trigger: CTGGATTTTGGGGACTCGCCATGGGAGCCTTTCCGA...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTACTCCTCTAGAATACTaGGAACAGAAGGCGTTTGTT +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTTPLEY*EQKAFV
Trigger: AACAAACGCCTTCTGTTCCCAGTATTCTAGAGGAGT...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTAGTTGCAGCACAAACTaGCTCTCCCCCTCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFSCSTN*LSPSVG
Trigger: CCCTACTGAGGGGGAGAGCCAGTTTGTGCTGCAACT...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTGGACTACCGTTTTCAACAGTTGCAGCACAAACTaGCTCTCCCCCTCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: FIMNEVEGYHRSWTTVFNSCSTN*LSPSVG
Trigger: CCCTACTGAGGGGGAGAGCCAGTTTGTGCTGCAACT...GTTGAAAACGGTAGTCCAGGACCTATGATATCCCTCCACTTCATTCATTATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTAGCAGAGGTGTACTTTaGAGGAGTCTCAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMASRGVL*RSLRSW
Trigger: CCAGGATCTGAGACTCCTCCAAAGTACACCTCTGCT...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTTCCATGTCAATTCCCTaGCCCCATGGAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFSMSIP*PHGAAG
Trigger: TCCTGCTGCTCCATGGGGCCAGGGAATTGACATGGA...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TCCGATGCAATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTTTAATGAGGAACCCTTaGGCGTTGCTACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: SDAMTANPELCLIAVPVCLMRNP*ALLLHS
Trigger: GCTATGGAGTAGCAACGCCCAAGGGTTCCTCATTAA...ACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATTGCATCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp ACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATTGTGTGGAATAATAGATAAATGTTCAGAGAAGCATTaGAGACGATGGCGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: TALGEVTRLVSLCGIIDKCSEKH*RRWRGA
Trigger: CGCTCCGCGCCATCGTCTTCAATGCTTCTCTGAACA...TTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR TCA 90 bp ACCAGATCATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCAGATCTGTGTTTCGGATaGAGAGACCACCTATTTGCA +
Preference number: 4 (lower is better)
Translates to: TRSSAASTNRLKYISSTPDLCFG*RDHLFA
Trigger: TGCAAATAGGTGGTCTCTTCATCCGAAACACAGATC...TGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGATGATCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR TCA 90 bp TTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACAGAGTTGGTACATCTTaGATCAAGACTAACTTATCC +
Preference number: 4 (lower is better)
Translates to: LSDCSSSVYSLWAVRRQDRVGTS*IKTNLS
Trigger: GGATAAGTTAGTCTTGATTCAAGATGTACCAACTCT...GTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGCAATCAGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGCTCCCACACTCCCAGTaGTGGATAATCTGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMLPHSQ*WIIWLC
Trigger: ACAAAGCCAGATTATCCATCACTGGGAGTGTGGGAG...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTTTTGGGTTTCCGAGCTaGGCTCATGCACACGTTGCT +
Preference number: 4 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFFGFPS*AHAHVA
Trigger: AGCAACGTGTGCATGAGCTCAGCTCGGAAACCCAAA...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCAGACAAAGGCCTTTCTaGGCAAGAACTTCACAGTTT +
Preference number: 4 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFRQRPF*ARTSQF
Trigger: AAACTGTGAAGTTCTTGCTCAGAAAGGCCTTTGTCT...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTTTGTTGTTAGGACAGTaGTTCATTCCCCAACTCAAA +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTLLLGQ*FIPQLK
Trigger: TTTGAGTTGGGGAATGAATCACTGTCCTAACAACAA...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGCATTCATTCCTTAAATaGGCCACTGATGTGCATGGC +
Preference number: 4 (lower is better)
Translates to: WIEVREVLEEISKRQVMKHSFLK*ATDVHG
Trigger: GCCATGCACATCAGTGGCTCATTTAAGGAATGAATG...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTTGGAGTATTGAAGGATaGGTACAAGTTACTCAGGTA +
Preference number: 4 (lower is better)
Translates to: RSERSPGRNKQAPGHEGAWSIEG*VQVTQV
Trigger: TACCTGAGTAACTTGTACTCATCCTTCAATACTCCA...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TATCTACAAGGGATTTCTTTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTTTTCCTGGCACCTCTaGTTCTCGGCTGCGCTAGGC +
Preference number: 4 (lower is better)
Translates to: YLQGISFIMNEVEGYHRSFSWHL*FSAALG
Trigger: GCCTAGCGCAGCCGAGAAGCAGAGGTGCCAGGAAAA...GGACCTATGATATCCCTCCACTTCATTCATTATGAAAGAAATCCCTTGTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393125.6
CDS-3UTR GCA 90 bp ACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATTGTGTGGAATAATAGATAAACACCTATTTGCACGCTaGTCGGAAAGGCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: TALGEVTRLVSLCGIIDKHLFAR*SERLPW
Trigger: CCATGGGAGCCTTTCCGAGCAGCGTGCAAATAGGTG...TTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR GCA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTAACGAAGGTCTTAGTTaGAGCACAAACTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMANEGLS*STNWLS
Trigger: GGAGAGCCAGTTTGTGCTGCAACTAAGACCTTCGTT...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTGGCAATAGCAATCTCTaGTTTCCCATAAACAAGTTC +
Preference number: 4 (lower is better)
Translates to: RSERSPGRNKQAPGHEGAGNSNL*FPINKF
Trigger: GAACTTGTTTATGGGAAAGCAGAGATTGCTATTGCC...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp ACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGTCTGGCTCTTCTGTGTaGCACTCATATGGACTAAAT +
Preference number: 4 (lower is better)
Translates to: TANPELCLIAVPVCTAFGSGSSV*HSYGLN
Trigger: ATTTAGTCCATATGAGTGGCACACAGAAGAGCCAGA...CCCAAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTGGAGAAAGGCAAATTTaGCCTTGGATTTGCGGACAC +
Preference number: 4 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMAGERQI*PWICGH
Trigger: GTGTCCGCAAATCCAAGGGCAAATTTGCCTTTCTCC...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCAGGCACTGTGCTGGGTaGTGGGGATACAACTGTGAA +
Preference number: 4 (lower is better)
Translates to: MFWRHRLACSRTSTTILSRHCAG*WGYNCE
Trigger: TTCACAGTTGTATCCCCAGCACCCAGCACAGTGCCT...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTGGACTACCGTTTTCAACCTCTCTTGGTTTTCCTaGCACCTCTGCTTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: FIMNEVEGYHRSWTTVFNLSWFS*HLCFSA
Trigger: AGCCGAGAAGCAGAGGTGCCAGGAAAACCAAGAGAG...GTTGAAAACGGTAGTCCAGGACCTATGATATCCCTCCACTTCATTCATTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393125.6
CDS-3UTR CCA 90 bp ACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATTGTGTGGAATAATAGATAAAGCTCCGGAGCCAGTCTaGTGTCAGGTTTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: TALGEVTRLVSLCGIIDKAPEPV*CQVFPS
Trigger: AGAAGGGAAAACCTGACACCAGACTGGCTCCGGAGC...TTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR CCA 90 bp ACCAGATCATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCACCGACGCATTGGGGCTaGTGTTATGAAGAAAAATTG +
Preference number: 4 (lower is better)
Translates to: TRSSAASTNRLKYISSTPPTHWG*CYEEKL
Trigger: CAATTTTTCTTCATAACACCAGCCCCAATGCGTCGG...TGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGATGATCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR CCA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTTACAGCAAAACTGTTaGCTGTCTCAATGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: REELRTEEIVYAVLHVLLLQQNC*LSQCCP
Trigger: TGGACAACATTGAGACAGCCAACAGTTTTGCTGTAA...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCACTCCTCTAGAATACTaGGAACAGAAGGCGTTTGTT +
Preference number: 4 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFTPLEY*EQKAFV
Trigger: AACAAACGCCTTCTGTTCCCAGTATTCTAGAGGAGT...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCAAGCAGAGGTGTACTTTaGAGGAGTCTCAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNASRGVL*RSLRSW
Trigger: CCAGGATCTGAGACTCCTCCAAAGTACACCTCTGCT...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTGTCATTGCCAAGAGTTaGTACATCTTGAATCAAGAC +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTVIAKS*YILNQD
Trigger: GTCTTGATTCAAGATGTACCAACTCTTGGCAATGAC...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCAGTGTGTACAGCCTTTaGGCAGTCAGGCGTCAAGAC +
Preference number: 4 (lower is better)
Translates to: MFWRHRLACSRTSTTILSSVYSL*AVRRQD
Trigger: GTCTTGACGCCTGACTGCCCAAAGGCTGTACACACT...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR CAA 72 bp ATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTTaGGGCCACTGCTCACTCATATGGCTCTTAACACCT +
Preference number: 4 (lower is better)
Translates to: IHSLNEPLMCMA*GHCSLIWLLTP
Trigger: AGGTGTTAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCATGCACATCAGTGGCTCATTTAAGGAATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
3UTR CAA 72 bp GATCTTCTCAAGAGCTTGGAATTTTTCCTGAGGGACTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: DLLKSLEFFLRD*CVCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACACACACAAGTCCCTCAGGAAAAATTCCAAGCTCTTGAGAAGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp ATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTGATCTGTGTTTCGGATaGAGAGACCACCTATTTGCA +
Preference number: 4 (lower is better)
Translates to: MTANPELCLIAVPVCTAFDLCFG*RDHLFA
Trigger: TGCAAATAGGTGGTCTCTTCATCCGAAACACAGATC...AAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCACCTGGATACTCTCTCTaGTCTAGTTTCTTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNAPGYSL*SSFFQR
Trigger: TCGCTGGAAGAAACTAGATCAGAGAGAGTATCCAGG...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCATTCCCTGTCAGCCCTTaGATTCGAACCTGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNAFPVSP*IRTCLS
Trigger: ACTCAAACAGGTTCGAATTCAAGGGCTGACAGGGAA...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGCATCCATTGTGTAATTaGCTCTACGTCCATAGTGGT +
Preference number: 4 (lower is better)
Translates to: WIEVREVLEEISKRQVMKHPLCN*LYVHSG
Trigger: ACCACTATGGACGTAGAGTCAATTACACAATGGATG...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTAGAGTTGGTACATCTTaGATCAAGACTAACTTATCC +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTRVGTS*IKTNLS
Trigger: GGATAAGTTAGTCTTGATTCAAGATGTACCAACTCT...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCTGGGATCTTGAGAGTTaGTGGAAGAAAATCAATCCT +
Preference number: 4 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFWDLES*WKKINP
Trigger: AGGATTGATTTTCTTCCATCAACTCTCAAGATCCCA...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTCTGCAGCACAGAGATTaGATGGCGAATGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFLQHRD*MANGIL
Trigger: CAAGATCCCATTCGCCATTCAATCTCTGTGCTGCAG...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTATTCAGTTGGAGTATTaGAGGATGAGTACAAGTTAC +
Preference number: 4 (lower is better)
Translates to: RSERSPGRNKQAPGHEGAIQLEY*RMSTSY
Trigger: GTAACTTGTACTCATCCTTCAATACTCCAACTGAAT...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTCATATAGCGCTGACATaGCAACCATTTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMAHIALT*QPFCPA
Trigger: AGCAGGACAAAATGGTTGGCATGTCAGCGCTATATG...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTCTTGAATCCCAAGTTTaGAATGATATAATGGTAGCC +
Preference number: 4 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTLESQV*NDIMVA
Trigger: GGCTACCATTATATCATTGCAAACTTGGGATTCAAG...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp ATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTTGTGTCTGCATCCCTTaGTCCATATTTTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: MTANPELCLIAVPVCTAFCVCIP*SIFSIR
Trigger: CCTGATGGAAAATATGGAGCAAGGGATGCAGACACA...AAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp AGGTCCGATGCAATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGGGCAATAGCAATCTCTaGTTTCCCATAAACAAGTTC +
Preference number: 4 (lower is better)
Translates to: RSDAMTANPELCLIAVPVGNSNL*FPINKF
Trigger: GAACTTGTTTATGGGAAAGCAGAGATTGCTATTGCC...CACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATTGCATCGGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTTTGGCCAGGTCTTCTaGACTTTCTATGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMFGQVF*TFYGRD
Trigger: GTCTCTCCCATAGAAAGTGCAGAAGACCTGGCCAAA...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCGATAGACACAGTCCCTaGCCTCAAGGAGCTTACAGT +
Preference number: 4 (lower is better)
Translates to: MFWRHRLACSRTSTTILSDRHSP*PQGAYS
Trigger: ACTGTAAGCTCCTTGAGGGCAGGGACTGTGTCTATC...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTAAATTCTGGGTATTCTaGGAGGAAGTTGGGTTAAAA +
Preference number: 4 (lower is better)
Translates to: REELRTEEIVYAVLHVLLKFWVF*EEVGLK
Trigger: TTTTAACCCAACTTCCTCGCAGAATACCCAGAATTT...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR GCA 90 bp ATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCACCACTCCCTGCAAAAGTGACATATaGTTCAAGCTCCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: ICSVNQPTQIYILHTTTPCKSDI*FKLLMK
Trigger: TTTCATGAGGAGCTTGAAGCATATGTCACTTTTGCA...GGGAGTGGTGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR CCA 90 bp AGGGGAATTGATATGTCAGAATCGCTAAGTGATTCTTTGTCAACATCTATTTCTCCTCTCCTACAGTCCTaGCTTCCCTCTCAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: RGIDMSESLSDSLSTSISPLLQS*LPSQPS
Trigger: GCTAGGCTGAGAGGGAAGCCAGGACTGTAGGAGAGG...AGAAATAGATGTTGACAAAGAATCACTTAGCGATTCTGACATATCAATTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393125.6
CDS-3UTR CCA 90 bp TATCTACAAGGGATTTCTTTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTCGGAAAGGCTCCCATaGCGAGTCCCCAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: YLQGISFIMNEVEGYHRSSERLP*RVPKIQ
Trigger: CTGGATTTTGGGGACTCGCCATGGGAGCCTTTCCGA...GGACCTATGATATCCCTCCACTTCATTCATTATGAAAGAAATCCCTTGTAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTGAGCTTCCGACGCATTaGGGCTGGTGTTATGAAGAA +
Preference number: 4 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFELPTH*GWCYEE
Trigger: TTCTTCATAACACCAGCCCCAATGCGTCGGAAGCTC...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTGGACTACCGTTTTCAACGAGCTTCCGACGCATTaGGGCTGGTGTTATGAAGAA +
Preference number: 4 (lower is better)
Translates to: FIMNEVEGYHRSWTTVFNELPTH*GWCYEE
Trigger: TTCTTCATAACACCAGCCCCAATGCGTCGGAAGCTC...GTTGAAAACGGTAGTCCAGGACCTATGATATCCCTCCACTTCATTCATTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCTTTTCCATAATAGCTTaGAGTATCGAGTATCCCCTG +
Preference number: 4 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFFSIIA*SIEYPL
Trigger: CAGGGGATACTCGATACTCCAAGCTATTATGGAAAA...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTGGACTACCGTTTTCAACAGCAGAGGTGTACTTTaGAGGAGTCTCAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: FIMNEVEGYHRSWTTVFNSRGVL*RSLRSW
Trigger: CCAGGATCTGAGACTCCTCCAAAGTACACCTCTGCT...GTTGAAAACGGTAGTCCAGGACCTATGATATCCCTCCACTTCATTCATTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp TATCTACAAGGGATTTCTTTCATAATGAATGAAGTGGAGGGATATCATAGGTCCAATTCCCTGGCCCCATaGAGCAGCAGGATTTGCCAG +
Preference number: 4 (lower is better)
Translates to: YLQGISFIMNEVEGYHRSNSLAP*SSRICQ
Trigger: CTGGCAAATCCTGCTGCTCCATGGGGCCAGGGAATT...GGACCTATGATATCCCTCCACTTCATTCATTATGAAAGAAATCCCTTGTAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTATCCATGTCAATTCCCTaGCCCCATGGAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLSMSIP*PHGAAG
Trigger: TCCTGCTGCTCCATGGGGCCAGGGAATTGACATGGA...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCAGACCTGAGAGGGATCTaGGTGAAATGTCACATCCTT +
Preference number: 4 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNADLRGI*VKCHIL
Trigger: AAGGATGTGACATTTCACCCAGATCCCTCTCAGGTC...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp ATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTCTTCTGCACTTTCTATaGGAGAGACCATTCGCTCAA +
Preference number: 4 (lower is better)
Translates to: MTANPELCLIAVPVCTAFLLHFL*ERPFAQ
Trigger: TTGAGCGAATGGTCTCTCCCATAGAAAGTGCAGAAG...AAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CCA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTCTTCCATGGACTATATaGATGTTCTGGAGACACAGG +
Preference number: 4 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMALPWTI*MFWRHR
Trigger: CCTGTGTCTCCAGAACATCCATATAGTCCATGGAAG...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATCTGGTAGTCCAGAGTTaGTCATCCAAGAAGAATCCC +
Preference number: 4 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNLVVQS*SSKKNP
Trigger: GGGATTCTTCTTGGATGACCAACTCTGGACTACCAG...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR TCA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCTGTTCAGAGAAGCATTaGAGACGATGGCGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILCSEKH*RRWRGA
Trigger: CGCTCCGCGCCATCGTCTTCAATGCTTCTCTGAACA...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393125.6
CDS-3UTR TCA 90 bp TCCGATGCAATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTTTGGGGCTGGTGTTATaGAGAAAAATTGCTAATCGA +
Preference number: 4 (lower is better)
Translates to: SDAMTANPELCLIAVPVCLGLVL*RKIANR
Trigger: TCGATTAGCAATTTTTCTTCATAACACCAGCCCCAA...ACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATTGCATCGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR TCA 90 bp ACCAGATCATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCATTGGGGCTGGTGTTATaGAGAAAAATTGCTAATCGA +
Preference number: 4 (lower is better)
Translates to: TRSSAASTNRLKYISSTPLGLVL*RKIANR
Trigger: TCGATTAGCAATTTTTCTTCATAACACCAGCCCCAA...TGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGATGATCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR TCA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCAGTGAATCGACTCATGTaGCATAGTGAAGGTTACAGC +
Preference number: 4 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNAVNRLM*HSEGYS
Trigger: GCTGTAACCTTCACTATGTCACATGAGTCGATTCAC...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGCATTCATTCCTTAAATaGGCCACTGATGTGCATGGC +
Preference number: 4 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMHSFLK*ATDVHG
Trigger: GCCATGCACATCAGTGGCTCATTTAAGGAATGAATG...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTATGAAGGGGCTCATGTaGTCTTCTCAAGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFMKGLM*SSQELG
Trigger: TCCAAGCTCTTGAGAAGATCACATGAGCCCCTTCAT...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TCCGATGCAATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTTGGAGTATTGAAGGATaGGTACAAGTTACTCAGGTA +
Preference number: 4 (lower is better)
Translates to: SDAMTANPELCLIAVPVCWSIEG*VQVTQV
Trigger: TACCTGAGTAACTTGTACTCATCCTTCAATACTCCA...ACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATTGCATCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR TCA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATCTGGAGAACAAGACTTaGGCCTTAGTTAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNLENKT*ALVRNG
Trigger: ACCATTCCTAACTAAGGCTCAAGTCTTGTTCTCCAG...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCCACCTATTTGCACGCTaGTCGGAAAGGCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILHLFAR*SERLPW
Trigger: CCATGGGAGCCTTTCCGAGCAGCGTGCAAATAGGTG...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp AGGGGAATTGATATGTCAGAATCGCTAAGTGATTCTTTGTCAACATCTATTTCTCACCTATTTGCACGCTaGTCGGAAAGGCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: RGIDMSESLSDSLSTSISHLFAR*SERLPW
Trigger: CCATGGGAGCCTTTCCGAGCAGCGTGCAAATAGGTG...AGAAATAGATGTTGACAAAGAATCACTTAGCGATTCTGACATATCAATTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp ACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCCAACCATTTTGTCCTaGTTTTTCCATAATAGCTTG +
Preference number: 4 (lower is better)
Translates to: TANPELCLIAVPVCTAFGPTILS*FFHNSL
Trigger: CAAGCTATTATGGAAAAAGCAGGACAAAATGGTTGG...CCCAAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR GCA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCTCACATGGCTTTCGCTaGTCAATGTATTCATTCATA +
Preference number: 4 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFSHGFR*SMYSFI
Trigger: TATGAATGAATACATTGAGCAGCGAAAGCCATGTGA...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTATGGCTTTGGGCCACTaGTCACTCATATGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFMALGH*SLIWLL
Trigger: TAAGAGCCATATGAGTGAGCAGTGGCCCAAAGCCAT...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTAAATGAGCCACTGATGTaGATGGCTTTGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLNEPLM*MALGHC
Trigger: GCAGTGGCCCAAAGCCATGCACATCAGTGGCTCATT...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TTATATCCAGTGCTCACTCTCAGCCTTCTATATCTAGATATAGGTATCACATATGCTCCGGAGCCAGTCTaGTGTCAGGTTTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LYPVLTLSLLYLDIGITYAPEPV*CQVFPS
Trigger: AGAAGGGAAAACCTGACACCAGACTGGCTCCGGAGC...ATATGTGATACCTATATCTAGATATAGAAGGCTGAGAGTGAGCACTGGATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393125.6
CDS-3UTR CCA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGCCGACGCATTGGGGCTaGTGTTATGAAGAAAAATTG +
Preference number: 4 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMPTHWG*CYEEKL
Trigger: CAATTTTTCTTCATAACACCAGCCCCAATGCGTCGG...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCACCGACGCATTGGGGCTaGTGTTATGAAGAAAAATTG +
Preference number: 4 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNAPTHWG*CYEEKL
Trigger: CAATTTTTCTTCATAACACCAGCCCCAATGCGTCGG...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp ACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATTGTGTGGAATAATAGATAAAGAGCTTCCGACGCATTaGGGCTGGTGTTATGAAGAA +
Preference number: 4 (lower is better)
Translates to: TALGEVTRLVSLCGIIDKELPTH*GWCYEE
Trigger: TTCTTCATAACACCAGCCCCAATGCGTCGGAAGCTC...TTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR CCA 90 bp AGGGGAATTGATATGTCAGAATCGCTAAGTGATTCTTTGTCAACATCTATTTCTAGTTGCAGCACAAACTaGCTCTCCCCCTCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: RGIDMSESLSDSLSTSISSCSTN*LSPSVG
Trigger: CCCTACTGAGGGGGAGAGCCAGTTTGTGCTGCAACT...AGAAATAGATGTTGACAAAGAATCACTTAGCGATTCTGACATATCAATTCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp AGGGGAATTGATATGTCAGAATCGCTAAGTGATTCTTTGTCAACATCTATTTCTTCCATGTCAATTCCCTaGCCCCATGGAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RGIDMSESLSDSLSTSISSMSIP*PHGAAG
Trigger: TCCTGCTGCTCCATGGGGCCAGGGAATTGACATGGA...AGAAATAGATGTTGACAAAGAATCACTTAGCGATTCTGACATATCAATTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp TTATATCCAGTGCTCACTCTCAGCCTTCTATATCTAGATATAGGTATCACATATTCCATGTCAATTCCCTaGCCCCATGGAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LYPVLTLSLLYLDIGITYSMSIP*PHGAAG
Trigger: TCCTGCTGCTCCATGGGGCCAGGGAATTGACATGGA...ATATGTGATACCTATATCTAGATATAGAAGGCTGAGAGTGAGCACTGGATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCACTTCTGCACTTTCTATaGGAGAGACCATTCGCTCAA +
Preference number: 4 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNALLHFL*ERPFAQ
Trigger: TTGAGCGAATGGTCTCTCCCATAGAAAGTGCAGAAG...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTGGACTACCGTTTTCAACCTGGTAGTCCAGAGTTaGTCATCCAAGAAGAATCCC +
Preference number: 4 (lower is better)
Translates to: FIMNEVEGYHRSWTTVFNLVVQS*SSKKNP
Trigger: GGGATTCTTCTTGGATGACCAACTCTGGACTACCAG...GTTGAAAACGGTAGTCCAGGACCTATGATATCCCTCCACTTCATTCATTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
3UTR CAA 72 bp CTTACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATaGTGTGGAATAATAGATAAAGCTGGGTTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LTALGEVTRLVS*CGIIDKAGLVG
Trigger: ACCAACCAACCCAGCTTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR TCA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCGATCTGTGTTTCGGATaGAGAGACCACCTATTTGCA +
Preference number: 4 (lower is better)
Translates to: MFWRHRLACSRTSTTILSDLCFG*RDHLFA
Trigger: TGCAAATAGGTGGTCTCTTCATCCGAAACACAGATC...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTGGACTACCGTTTTCAACGATCTGTGTTTCGGATaGAGAGACCACCTATTTGCA +
Preference number: 4 (lower is better)
Translates to: FIMNEVEGYHRSWTTVFNDLCFG*RDHLFA
Trigger: TGCAAATAGGTGGTCTCTTCATCCGAAACACAGATC...GTTGAAAACGGTAGTCCAGGACCTATGATATCCCTCCACTTCATTCATTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR TCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTGAATTCGAACCTGTTTaGGTGTCCTCTCCATGTCAA +
Preference number: 4 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFEFEPV*VSSPCQ
Trigger: TTGACATGGAGAGGACACTCAAACAGGTTCGAATTC...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGATCCTGAACTTTGTCTaGTTGCAGTTCCAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMILNFV*LQFQCV
Trigger: TACACACTGGAACTGCAATCAGACAAAGTTCAGGAT...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTACTGCAGCACAGAGATTaGATGGCGAATGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLLQHRD*MANGIL
Trigger: CAAGATCCCATTCGCCATTCAATCTCTGTGCTGCAG...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGATTCAGTTGGAGTATTaGAGGATGAGTACAAGTTAC +
Preference number: 4 (lower is better)
Translates to: WIEVREVLEEISKRQVMKIQLEY*RMSTSY
Trigger: GTAACTTGTACTCATCCTTCAATACTCCAACTGAAT...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp ACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATTGTGTGGAATAATAGATAAAAACTCTGATTTGTCCTaGAACCAGGCAACTGTGGGA +
Preference number: 4 (lower is better)
Translates to: TALGEVTRLVSLCGIIDKNSDLS*NQATVG
Trigger: TCCCACAGTTGCCTGGTTTCAGGACAAATCAGAGTT...TTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR GCA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGCCAACCATTTTGTCCTaGTTTTTCCATAATAGCTTG +
Preference number: 4 (lower is better)
Translates to: WIEVREVLEEISKRQVMKPTILS*FFHNSL
Trigger: CAAGCTATTATGGAAAAAGCAGGACAAAATGGTTGG...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGAGATATCAATTTTCTaGCTCCTAAGACTTCGGAAA +
Preference number: 4 (lower is better)
Translates to: WIEVREVLEEISKRQVMKEISIF*LLRLRK
Trigger: TTTCCGAAGTCTTAGGAGGCAGAAAATTGATATCTC...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTTGTGTCTGCATCCCTTaGTCCATATTTTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFCVCIP*SIFSIR
Trigger: CCTGATGGAAAATATGGAGCAAGGGATGCAGACACA...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTGGCAATAGCAATCTCTaGTTTCCCATAAACAAGTTC +
Preference number: 4 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMAGNSNL*FPINKF
Trigger: GAACTTGTTTATGGGAAAGCAGAGATTGCTATTGCC...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTAATTTGCCCTTGGATTTaGGGACACGAGCTACTCCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLICPWI*GHELLP
Trigger: AGGGAGTAGCTCGTGTCCGCAAATCCAAGGGCAAAT...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCCATTCTCTTCGCTTCTaGCCTGGACTTGTAACAGAA +
Preference number: 4 (lower is better)
Translates to: MFWRHRLACSRTSTTILSHSLRF*PGLVTE
Trigger: TTCTGTTACAAGTCCAGGGCAGAAGCGAAGAGAATG...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCATGCAGTGCTCCATGTaGTGCTTTGGAGGTTCATTT +
Preference number: 4 (lower is better)
Translates to: MFWRHRLACSRTSTTILSMQCSM*CFGGSF
Trigger: AAATGAACCTCCAAAGCAGCACATGGAGCACTGCAT...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTTTACAGCAAAACTGTTaGCTGTCTCAATGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMALQQNC*LSQCCP
Trigger: TGGACAACATTGAGACAGCCAACAGTTTTGCTGTAA...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATACTCCTCTAGAATACTaGGAACAGAAGGCGTTTGTT +
Preference number: 4 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNTPLEY*EQKAFV
Trigger: AACAAACGCCTTCTGTTCCCAGTATTCTAGAGGAGT...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTACACTGTGCTGGGTGCTaGGGATACAACTGTGAACAA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLHCAGC*GYNCEQ
Trigger: TTGTTCACAGTTGTATCCCCAGCACCCAGCACAGTG...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTGGACTACCGTTTTCAACAAAGCAGTGTATTCCTaGTCTGTGTTTCGGATGAAG +
Preference number: 4 (lower is better)
Translates to: FIMNEVEGYHRSWTTVFNKAVYS*SVFRMK
Trigger: CTTCATCCGAAACACAGATCAGGAATACACTGCTTT...GTTGAAAACGGTAGTCCAGGACCTATGATATCCCTCCACTTCATTCATTATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR TCA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATTTGGGGCTGGTGTTATaGAGAAAAATTGCTAATCGA +
Preference number: 4 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNLGLVL*RKIANR
Trigger: TCGATTAGCAATTTTTCTTCATAACACCAGCCCCAA...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTACCTGGATACTCTCTCTaGTCTAGTTTCTTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLPGYSL*SSFFQR
Trigger: TCGCTGGAAGAAACTAGATCAGAGAGAGTATCCAGG...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTATTCCCTGTCAGCCCTTaGATTCGAACCTGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLFPVSP*IRTCLS
Trigger: ACTCAAACAGGTTCGAATTCAAGGGCTGACAGGGAA...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp ATCTACCCTTGGAAATGGAGTGATATAATTCCATCATTTACATACAGTGACCTCTTCCCTGTCAGCCCTTaGATTCGAACCTGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: IYPWKWSDIIPSFTYSDLFPVSP*IRTCLS
Trigger: ACTCAAACAGGTTCGAATTCAAGGGCTGACAGGGAA...GAGGTCACTGTATGTAAATGATGGAATTATATCACTCCATTTCCAAGGGTAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR TCA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCATCCTGAACTTTGTCTaGTTGCAGTTCCAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: MFWRHRLACSRTSTTILSILNFV*LQFQCV
Trigger: TACACACTGGAACTGCAATCAGACAAAGTTCAGGAT...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTAATGACAGCCAATCCTaGACTTTGTCTGATTGCAGT +
Preference number: 4 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFNDSQS*TLSDCS
Trigger: ACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATT...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGGGATCTTGAGAGTTaGTGGAAGAAAATCAATCCT +
Preference number: 4 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMWDLES*WKKINP
Trigger: AGGATTGATTTTCTTCCATCAACTCTCAAGATCCCA...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TTCCATCATTTACATACAGTGACCTCATTTCAAGATAGGGGAATTGATATGTCAAAGAGACCACCTATTTaGACGCTGCTCGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: FHHLHTVTSFQDRGIDMSKRPPI*TLLGKA
Trigger: AGCCTTTCCGAGCAGCGTGCAAATAGGTGGTCTCTT...TGACATATCAATTCCCCTATCTTGAAATGAGGTCACTGTATGTAAATGATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCAAGAGACCACCTATTTaGACGCTGCTCGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILKRPPI*TLLGKA
Trigger: AGCCTTTCCGAGCAGCGTGCAAATAGGTGGTCTCTT...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTAGATATGTAAGGCGCTaGAGAATGAGGTCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFRYVRR*RMRSRY
Trigger: ATACCTTGACCTCATTCTGCAGCGCCTTACATATCT...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTTCACATGGCTTTCGCTaGTCAATGTATTCATTCATA +
Preference number: 4 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMASHGFR*SMYSFI
Trigger: TATGAATGAATACATTGAGCAGCGAAAGCCATGTGA...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TTCCATCATTTACATACAGTGACCTCATTTCAAGATAGGGGAATTGATATGTCAGAGCTTCCGACGCATTaGGGCTGGTGTTATGAAGAA +
Preference number: 4 (lower is better)
Translates to: FHHLHTVTSFQDRGIDMSELPTH*GWCYEE
Trigger: TTCTTCATAACACCAGCCCCAATGCGTCGGAAGCTC...TGACATATCAATTCCCCTATCTTGAAATGAGGTCACTGTATGTAAATGATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATTTTTCCATAATAGCTTaGAGTATCGAGTATCCCCTG +
Preference number: 4 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNFSIIA*SIEYPL
Trigger: CAGGGGATACTCGATACTCCAAGCTATTATGGAAAA...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp TTCCATCATTTACATACAGTGACCTCATTTCAAGATAGGGGAATTGATATGTCAAGCAGAGGTGTACTTTaGAGGAGTCTCAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: FHHLHTVTSFQDRGIDMSSRGVL*RSLRSW
Trigger: CCAGGATCTGAGACTCCTCCAAAGTACACCTCTGCT...TGACATATCAATTCCCCTATCTTGAAATGAGGTCACTGTATGTAAATGATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATCAATTCCATCTGTGTTaGGAGTTTTCAGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNQFHLC*EFSAES
Trigger: AGATTCAGCTGAAAACTCCCAACACAGATGGAATTG...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp ACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATTGTGTGGAATAATAGATAAAGTGAATTCAGGTGGATaGGAGCCTAATGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: TALGEVTRLVSLCGIIDKVNSGG*EPNVIW
Trigger: CCAAATCACATTAGGCTCCCATCCACCTGAATTCAC...TTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR TCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTTTGGGGCTGGTGTTATaGAGAAAAATTGCTAATCGA +
Preference number: 4 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFLGLVL*RKIANR
Trigger: TCGATTAGCAATTTTTCTTCATAACACCAGCCCCAA...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TTCCATCATTTACATACAGTGACCTCATTTCAAGATAGGGGAATTGATATGTCACCTGGATACTCTCTCTaGTCTAGTTTCTTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: FHHLHTVTSFQDRGIDMSPGYSL*SSFFQR
Trigger: TCGCTGGAAGAAACTAGATCAGAGAGAGTATCCAGG...TGACATATCAATTCCCCTATCTTGAAATGAGGTCACTGTATGTAAATGATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR TCA 90 bp AGGGGAATTGATATGTCAGAATCGCTAAGTGATTCTTTGTCAACATCTATTTCTTTCCCTGTCAGCCCTTaGATTCGAACCTGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: RGIDMSESLSDSLSTSISFPVSP*IRTCLS
Trigger: ACTCAAACAGGTTCGAATTCAAGGGCTGACAGGGAA...AGAAATAGATGTTGACAAAGAATCACTTAGCGATTCTGACATATCAATTCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR TCA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATAGAGTTGGTACATCTTaGATCAAGACTAACTTATCC +
Preference number: 4 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNRVGTS*IKTNLS
Trigger: GGATAAGTTAGTCTTGATTCAAGATGTACCAACTCT...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR TCA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCTTGTTGTTAGGACAGTaGTTCATTCCCCAACTCAAA +
Preference number: 4 (lower is better)
Translates to: MFWRHRLACSRTSTTILSLLLGQ*FIPQLK
Trigger: TTTGAGTTGGGGAATGAATCACTGTCCTAACAACAA...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCAACGAAGGTCTTAGTTaGAGCACAAACTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILNEGLS*STNWLS
Trigger: GGAGAGCCAGTTTGTGCTGCAACTAAGACCTTCGTT...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp AGGGGAATTGATATGTCAGAATCGCTAAGTGATTCTTTGTCAACATCTATTTCTAACGAAGGTCTTAGTTaGAGCACAAACTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RGIDMSESLSDSLSTSISNEGLS*STNWLS
Trigger: GGAGAGCCAGTTTGTGCTGCAACTAAGACCTTCGTT...AGAAATAGATGTTGACAAAGAATCACTTAGCGATTCTGACATATCAATTCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATCCAACCATTTTGTCCTaGTTTTTCCATAATAGCTTG +
Preference number: 4 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNPTILS*FFHNSL
Trigger: CAAGCTATTATGGAAAAAGCAGGACAAAATGGTTGG...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATGAGATATCAATTTTCTaGCTCCTAAGACTTCGGAAA +
Preference number: 4 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNEISIF*LLRLRK
Trigger: TTTCCGAAGTCTTAGGAGGCAGAAAATTGATATCTC...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTATGTGTCTGCATCCCTTaGTCCATATTTTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLCVCIP*SIFSIR
Trigger: CCTGATGGAAAATATGGAGCAAGGGATGCAGACACA...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp TTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTGGACTACCGTTTTCAACGTCATTGCCAAGAGTTaGTACATCTTGAATCAAGAC +
Preference number: 4 (lower is better)
Translates to: FIMNEVEGYHRSWTTVFNVIAKS*YILNQD
Trigger: GTCTTGATTCAAGATGTACCAACTCTTGGCAATGAC...GTTGAAAACGGTAGTCCAGGACCTATGATATCCCTCCACTTCATTCATTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTACACTGCTCACTCATATaGCTCTTAACACCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLHCSLI*LLTPSP
Trigger: AGGAGAAGGTGTTAAGAGCCATATGAGTGAGCAGTG...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TTATATCCAGTGCTCACTCTCAGCCTTCTATATCTAGATATAGGTATCACATATGATCTGTGTTTCGGATaGAGAGACCACCTATTTGCA +
Preference number: 4 (lower is better)
Translates to: LYPVLTLSLLYLDIGITYDLCFG*RDHLFA
Trigger: TGCAAATAGGTGGTCTCTTCATCCGAAACACAGATC...ATATGTGATACCTATATCTAGATATAGAAGGCTGAGAGTGAGCACTGGATATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTAAAAGCAGTGTATTCCTaGTCTGTGTTTCGGATGAAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLKAVYS*SVFRMK
Trigger: CTTCATCCGAAACACAGATCAGGAATACACTGCTTT...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp TTATATCCAGTGCTCACTCTCAGCCTTCTATATCTAGATATAGGTATCACATATGAATTCGAACCTGTTTaGGTGTCCTCTCCATGTCAA +
Preference number: 4 (lower is better)
Translates to: LYPVLTLSLLYLDIGITYEFEPV*VSSPCQ
Trigger: TTGACATGGAGAGGACACTCAAACAGGTTCGAATTC...ATATGTGATACCTATATCTAGATATAGAAGGCTGAGAGTGAGCACTGGATATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTACATCCATTGTGTAATTaGCTCTACGTCCATAGTGGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLHPLCN*LYVHSG
Trigger: ACCACTATGGACGTAGAGTCAATTACACAATGGATG...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTAGAGTTGGTACATCTTaGATCAAGACTAACTTATCC +
Preference number: 4 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFRVGTS*IKTNLS
Trigger: GGATAAGTTAGTCTTGATTCAAGATGTACCAACTCT...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCCCAACCATTTTGTCCTaGTTTTTCCATAATAGCTTG +
Preference number: 4 (lower is better)
Translates to: MFWRHRLACSRTSTTILSPTILS*FFHNSL
Trigger: CAAGCTATTATGGAAAAAGCAGGACAAAATGGTTGG...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TTATATCCAGTGCTCACTCTCAGCCTTCTATATCTAGATATAGGTATCACATATCATATAGCGCTGACATaGCAACCATTTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LYPVLTLSLLYLDIGITYHIALT*QPFCPA
Trigger: AGCAGGACAAAATGGTTGGCATGTCAGCGCTATATG...ATATGTGATACCTATATCTAGATATAGAAGGCTGAGAGTGAGCACTGGATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCCTTGAATCCCAAGTTTaGAATGATATAATGGTAGCC +
Preference number: 4 (lower is better)
Translates to: MFWRHRLACSRTSTTILSLESQV*NDIMVA
Trigger: GGCTACCATTATATCATTGCAAACTTGGGATTCAAG...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTATCTGGCTCTTCTGTGTaGCACTCATATGGACTAAAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLSGSSV*HSYGLN
Trigger: ATTTAGTCCATATGAGTGGCACACAGAAGAGCCAGA...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR GCA 90 bp ACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATTGTGTGGAATAATAGATAAAGAGGAATTGTACAACTaGTTTCTTACGGCATTAGGT +
Preference number: 4 (lower is better)
Translates to: TALGEVTRLVSLCGIIDKEELYN*FLTALG
Trigger: ACCTAATGCCGTAAGAAAGCAGTTGTACAATTCCTC...TTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR CCA 90 bp AGGGGAATTGATATGTCAGAATCGCTAAGTGATTCTTTGTCAACATCTATTTCTCCGACGCATTGGGGCTaGTGTTATGAAGAAAAATTG +
Preference number: 4 (lower is better)
Translates to: RGIDMSESLSDSLSTSISPTHWG*CYEEKL
Trigger: CAATTTTTCTTCATAACACCAGCCCCAATGCGTCGG...AGAAATAGATGTTGACAAAGAATCACTTAGCGATTCTGACATATCAATTCCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp ACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATTGTGTGGAATAATAGATAAATTACAGCAAAACTGTTaGCTGTCTCAATGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: TALGEVTRLVSLCGIIDKLQQNC*LSQCCP
Trigger: TGGACAACATTGAGACAGCCAACAGTTTTGCTGTAA...TTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR CCA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATTTAAATTTACTACACTaGAGAACAAGACTTGAGCCT +
Preference number: 4 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNLNLLH*RTRLEP
Trigger: AGGCTCAAGTCTTGTTCTCCAGTGTAGTAAATTTAA...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp ACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATTGTGTGGAATAATAGATAAACGAGGTAAGGATTCATaGAGTTATATCCACAGGATA +
Preference number: 4 (lower is better)
Translates to: TALGEVTRLVSLCGIIDKRGKDS*SYIHRI
Trigger: TATCCTGTGGATATAACTCCATGAATCCTTACCTCG...TTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR TCA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCAAAGCAGTGTATTCCTaGTCTGTGTTTCGGATGAAG +
Preference number: 4 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILKAVYS*SVFRMK
Trigger: CTTCATCCGAAACACAGATCAGGAATACACTGCTTT...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTATTGGGGCTGGTGTTATaGAGAAAAATTGCTAATCGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLLGLVL*RKIANR
Trigger: TCGATTAGCAATTTTTCTTCATAACACCAGCCCCAA...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp AGGGGAATTGATATGTCAGAATCGCTAAGTGATTCTTTGTCAACATCTATTTCTCATCCATTGTGTAATTaGCTCTACGTCCATAGTGGT +
Preference number: 4 (lower is better)
Translates to: RGIDMSESLSDSLSTSISHPLCN*LYVHSG
Trigger: ACCACTATGGACGTAGAGTCAATTACACAATGGATG...AGAAATAGATGTTGACAAAGAATCACTTAGCGATTCTGACATATCAATTCCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCAGATATGTAAGGCGCTaGAGAATGAGGTCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILRYVRR*RMRSRY
Trigger: ATACCTTGACCTCATTCTGCAGCGCCTTACATATCT...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTACCAGATTTTTGTGTCTaGATCCCTTGCTCCATATTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLPDFCV*IPCSIF
Trigger: AAATATGGAGCAAGGGATGCAGACACAAAAATCTGG...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CCA 90 bp AGGGGAATTGATATGTCAGAATCGCTAAGTGATTCTTTGTCAACATCTATTTCTACTCCTCTAGAATACTaGGAACAGAAGGCGTTTGTT +
Preference number: 4 (lower is better)
Translates to: RGIDMSESLSDSLSTSISTPLEY*EQKAFV
Trigger: AACAAACGCCTTCTGTTCCCAGTATTCTAGAGGAGT...AGAAATAGATGTTGACAAAGAATCACTTAGCGATTCTGACATATCAATTCCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTATTTTCCATAATAGCTTaGAGTATCGAGTATCCCCTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLFSIIA*SIEYPL
Trigger: CAGGGGATACTCGATACTCCAAGCTATTATGGAAAA...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR TCA 90 bp AGGGGAATTGATATGTCAGAATCGCTAAGTGATTCTTTGTCAACATCTATTTCTTTGGGGCTGGTGTTATaGAGAAAAATTGCTAATCGA +
Preference number: 4 (lower is better)
Translates to: RGIDMSESLSDSLSTSISLGLVL*RKIANR
Trigger: TCGATTAGCAATTTTTCTTCATAACACCAGCCCCAA...AGAAATAGATGTTGACAAAGAATCACTTAGCGATTCTGACATATCAATTCCCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR TCA 90 bp ATCTACCCTTGGAAATGGAGTGATATAATTCCATCATTTACATACAGTGACCTCGGTGGTTTAAGATTATaGCTAGTTCTCCTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: IYPWKWSDIIPSFTYSDLGGLRL*LVLLSN
Trigger: ATTGCTAAGGAGAACTAGTCATAATCTTAAACCACC...GAGGTCACTGTATGTAAATGATGGAATTATATCACTCCATTTCCAAGGGTAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428631.6
CDS-3UTR GCA 90 bp ATCTACCCTTGGAAATGGAGTGATATAATTCCATCATTTACATACAGTGACCTCCTTGAATCCCAAGTTTaGAATGATATAATGGTAGCC +
Preference number: 4 (lower is better)
Translates to: IYPWKWSDIIPSFTYSDLLESQV*NDIMVA
Trigger: GGCTACCATTATATCATTGCAAACTTGGGATTCAAG...GAGGTCACTGTATGTAAATGATGGAATTATATCACTCCATTTCCAAGGGTAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp ATCTACCCTTGGAAATGGAGTGATATAATTCCATCATTTACATACAGTGACCTCGAGATATCAATTTTCTaGCTCCTAAGACTTCGGAAA +
Preference number: 4 (lower is better)
Translates to: IYPWKWSDIIPSFTYSDLEISIF*LLRLRK
Trigger: TTTCCGAAGTCTTAGGAGGCAGAAAATTGATATCTC...GAGGTCACTGTATGTAAATGATGGAATTATATCACTCCATTTCCAAGGGTAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp ATCTACCCTTGGAAATGGAGTGATATAATTCCATCATTTACATACAGTGACCTCCTGGGGATAATTACATaGAGATGCCAATATCTTGTT +
Preference number: 4 (lower is better)
Translates to: IYPWKWSDIIPSFTYSDLLGIIT*RCQYLV
Trigger: AACAAGATATTGGCATCTGCATGTAATTATCCCCAG...GAGGTCACTGTATGTAAATGATGGAATTATATCACTCCATTTCCAAGGGTAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp ATCTACCCTTGGAAATGGAGTGATATAATTCCATCATTTACATACAGTGACCTCATGAATTATATCCAGTaGTCACTCTCAGCCTTCTAT +
Preference number: 4 (lower is better)
Translates to: IYPWKWSDIIPSFTYSDLMNYIQ*SLSAFY
Trigger: ATAGAAGGCTGAGAGTGAGCACTGGATATAATTCAT...GAGGTCACTGTATGTAAATGATGGAATTATATCACTCCATTTCCAAGGGTAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp TATCTACAAGGGATTTCTTTCATAATGAATGAAGTGGAGGGATATCATAGGTCCATGAATTATATCCAGTaGTCACTCTCAGCCTTCTAT +
Preference number: 4 (lower is better)
Translates to: YLQGISFIMNEVEGYHRSMNYIQ*SLSAFY
Trigger: ATAGAAGGCTGAGAGTGAGCACTGGATATAATTCAT...GGACCTATGATATCCCTCCACTTCATTCATTATGAAAGAAATCCCTTGTAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp TTATATCCAGTGCTCACTCTCAGCCTTCTATATCTAGATATAGGTATCACATATTTACAGCAAAACTGTTaGCTGTCTCAATGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LYPVLTLSLLYLDIGITYLQQNC*LSQCCP
Trigger: TGGACAACATTGAGACAGCCAACAGTTTTGCTGTAA...ATATGTGATACCTATATCTAGATATAGAAGGCTGAGAGTGAGCACTGGATATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp TTCCATCATTTACATACAGTGACCTCATTTCAAGATAGGGGAATTGATATGTCATTACAGCAAAACTGTTaGCTGTCTCAATGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: FHHLHTVTSFQDRGIDMSLQQNC*LSQCCP
Trigger: TGGACAACATTGAGACAGCCAACAGTTTTGCTGTAA...TGACATATCAATTCCCCTATCTTGAAATGAGGTCACTGTATGTAAATGATGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp TTATATCCAGTGCTCACTCTCAGCCTTCTATATCTAGATATAGGTATCACATATTTTTCCATAATAGCTTaGAGTATCGAGTATCCCCTG +
Preference number: 4 (lower is better)
Translates to: LYPVLTLSLLYLDIGITYFSIIA*SIEYPL
Trigger: CAGGGGATACTCGATACTCCAAGCTATTATGGAAAA...ATATGTGATACCTATATCTAGATATAGAAGGCTGAGAGTGAGCACTGGATATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp TATCTACAAGGGATTTCTTTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTTAAAATCCACCAACTaGAATCCAGTAACATTGGCT +
Preference number: 4 (lower is better)
Translates to: YLQGISFIMNEVEGYHRSLKSTN*NPVTLA
Trigger: AGCCAATGTTACTGGATTCCAGTTGGTGGATTTTAA...GGACCTATGATATCCCTCCACTTCATTCATTATGAAAGAAATCCCTTGTAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp AGGGGAATTGATATGTCAGAATCGCTAAGTGATTCTTTGTCAACATCTATTTCTGTCATTGCCAAGAGTTaGTACATCTTGAATCAAGAC +
Preference number: 4 (lower is better)
Translates to: RGIDMSESLSDSLSTSISVIAKS*YILNQD
Trigger: GTCTTGATTCAAGATGTACCAACTCTTGGCAATGAC...AGAAATAGATGTTGACAAAGAATCACTTAGCGATTCTGACATATCAATTCCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp AGGGGAATTGATATGTCAGAATCGCTAAGTGATTCTTTGTCAACATCTATTTCTGGATATCATAGGTCCTaGACTACCGTTTTCAACAAA +
Preference number: 4 (lower is better)
Translates to: RGIDMSESLSDSLSTSISGYHRS*TTVFNK
Trigger: TTTGTTGAAAACGGTAGTCCAGGACCTATGATATCC...AGAAATAGATGTTGACAAAGAATCACTTAGCGATTCTGACATATCAATTCCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp TTCCATCATTTACATACAGTGACCTCATTTCAAGATAGGGGAATTGATATGTCACAATTCCATCTGTGTTaGGAGTTTTCAGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: FHHLHTVTSFQDRGIDMSQFHLC*EFSAES
Trigger: AGATTCAGCTGAAAACTCCCAACACAGATGGAATTG...TGACATATCAATTCCCCTATCTTGAAATGAGGTCACTGTATGTAAATGATGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp ATCTACCCTTGGAAATGGAGTGATATAATTCCATCATTTACATACAGTGACCTCCAAAGGACAGACAACTaGAAGAACAATAACACCATA +
Preference number: 4 (lower is better)
Translates to: IYPWKWSDIIPSFTYSDLQRTDN*KNNNTI
Trigger: TATGGTGTTATTGTTCTTCCAGTTGTCTGTCCTTTG...GAGGTCACTGTATGTAAATGATGGAATTATATCACTCCATTTCCAAGGGTAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR TCA 90 bp TTATATCCAGTGCTCACTCTCAGCCTTCTATATCTAGATATAGGTATCACATATAGAGTTGGTACATCTTaGATCAAGACTAACTTATCC +
Preference number: 4 (lower is better)
Translates to: LYPVLTLSLLYLDIGITYRVGTS*IKTNLS
Trigger: GGATAAGTTAGTCTTGATTCAAGATGTACCAACTCT...ATATGTGATACCTATATCTAGATATAGAAGGCTGAGAGTGAGCACTGGATATAA
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCCCAACCATTTTGTCCTaGTTTTTCCATAATAGCTTG +
Preference number: 4 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILPTILS*FFHNSL
Trigger: CAAGCTATTATGGAAAAAGCAGGACAAAATGGTTGG...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCCTTGAATCCCAAGTTTaGAATGATATAATGGTAGCC +
Preference number: 4 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILLESQV*NDIMVA
Trigger: GGCTACCATTATATCATTGCAAACTTGGGATTCAAG...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp AGGGGAATTGATATGTCAGAATCGCTAAGTGATTCTTTGTCAACATCTATTTCTCTGGGGATAATTACATaGAGATGCCAATATCTTGTT +
Preference number: 4 (lower is better)
Translates to: RGIDMSESLSDSLSTSISLGIIT*RCQYLV
Trigger: AACAAGATATTGGCATCTGCATGTAATTATCCCCAG...AGAAATAGATGTTGACAAAGAATCACTTAGCGATTCTGACATATCAATTCCCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCTTAAAATCCACCAACTaGAATCCAGTAACATTGGCT +
Preference number: 4 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILLKSTN*NPVTLA
Trigger: AGCCAATGTTACTGGATTCCAGTTGGTGGATTTTAA...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp ATCTACCCTTGGAAATGGAGTGATATAATTCCATCATTTACATACAGTGACCTCATCTACCCTTGGAAATaGAGTGATATAATTCCATCA +
Preference number: 4 (lower is better)
Translates to: IYPWKWSDIIPSFTYSDLIYPWK*SDIIPS
Trigger: TGATGGAATTATATCACTCCATTTCCAAGGGTAGAT...GAGGTCACTGTATGTAAATGATGGAATTATATCACTCCATTTCCAAGGGTAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp AGGGGAATTGATATGTCAGAATCGCTAAGTGATTCTTTGTCAACATCTATTTCTCAAAGGACAGACAACTaGAAGAACAATAACACCATA +
Preference number: 4 (lower is better)
Translates to: RGIDMSESLSDSLSTSISQRTDN*KNNNTI
Trigger: TATGGTGTTATTGTTCTTCCAGTTGTCTGTCCTTTG...AGAAATAGATGTTGACAAAGAATCACTTAGCGATTCTGACATATCAATTCCCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp TTCCATCATTTACATACAGTGACCTCATTTCAAGATAGGGGAATTGATATGTCAATTACTGAACGATTATaGAGTTGCAAATATCAGAGG +
Preference number: 4 (lower is better)
Translates to: FHHLHTVTSFQDRGIDMSITERL*SCKYQR
Trigger: CCTCTGATATTTGCAACTGCATAATCGTTCAGTAAT...TGACATATCAATTCCCCTATCTTGAAATGAGGTCACTGTATGTAAATGATGGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR GCA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCATTACTGAACGATTATaGAGTTGCAAATATCAGAGG +
Preference number: 4 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILITERL*SCKYQR
Trigger: CCTCTGATATTTGCAACTGCATAATCGTTCAGTAAT...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CCA 90 bp AGGGGAATTGATATGTCAGAATCGCTAAGTGATTCTTTGTCAACATCTATTTCTATCTACCCTTGGAAATaGAGTGATATAATTCCATCA +
Preference number: 4 (lower is better)
Translates to: RGIDMSESLSDSLSTSISIYPWK*SDIIPS
Trigger: TGATGGAATTATATCACTCCATTTCCAAGGGTAGAT...AGAAATAGATGTTGACAAAGAATCACTTAGCGATTCTGACATATCAATTCCCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS GCA 90 bp TCCCTCTCCTACAGTCCTGGCTTCCCTCTCAGCCTAGCCCTCTTCTaGCACTGGGCTGCGCGCGGGGGACTCCGGTCCTCGCTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: SLSYSPGFPLSLALF*HWAARGGLRSSLQQ
Trigger: TTGCTGCAGCGAGGACCGGAGTCCCCCGCGCGCAGCCCAGTGGCAGAAGAGGGCTAGGCTGAGAGGGAAGCCAGGACTGTAGGAGAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393125.6
CDS CCA 90 bp TCCTACAGTCCTGGCTTCCCTCTCAGCCTAGCCCTCTTCTGCCACTaGGCTGCGCGCGGGGGACTCCGGTCCTCGCTGCAGCAAAGATTT +
Preference number: 5 (lower is better)
Translates to: SYSPGFPLSLALFCH*AARGGLRSSLQQRF
Trigger: AAATCTTTGCTGCAGCGAGGACCGGAGTCCCCCGCGCGCAGCCCAGTGGCAGAAGAGGGCTAGGCTGAGAGGGAAGCCAGGACTGTAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393125.6
CDS-3UTR CAA 90 bp CTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGGCCCCTGCCGCATCCTaGCAGGTTCGTGAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: LIAVPVCTAFGQSGVKTRAPAAS*QVREED
Trigger: GTCCTCCTCACGAACCTGCAAGGATGCGGCAGGGGC...CCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGCAATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR CAA 90 bp GCAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCGCACTCGTCTTGTCCTaGGAGTCACCTCCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: AVPVCTAFGQSGVKTRPFALVLS*ESPPPL
Trigger: CAGCGGGGGAGGTGACTCCAAGGACAAGACGAGTGC...GAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp AAAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACACTGTTCAGAGAAGCATaGAAGACGATGGCGCGGAGC +
Preference number: 5 (lower is better)
Translates to: KDPRVACPSGLRFHQSPTLFREA*KTMARS
Trigger: GCTCCGCGCCATCGTCTTCAATGCTTCTCTGAACAG...TGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000393127.6
CDS-3UTR CAA 90 bp AAAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGAAGAGACCACCTATTaGCACGCTGCTCGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: KDPRVACPSGLRFHQSPTEETTY*HAARKG
Trigger: GCCTTTCCGAGCAGCGTGCAAATAGGTGGTCTCTTC...TGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp CAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCAGAGCTCATGCACACGTaGCTGCTGCTGATGTCCGGC +
Preference number: 5 (lower is better)
Translates to: QCVQPLGSQASRRGHSLPELMHT*LLLMSG
Trigger: GCCGGACATCAGCAGCAGCAACGTGTGCATGAGCTC...TGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR CAA 90 bp ACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCACTCAAGGCACTCGTCTaGTCCTTGGAGTCACCTCCC +
Preference number: 5 (lower is better)
Translates to: TAFGQSGVKTRPFSPTLPLKALV*SLESPP
Trigger: GGGAGGTGACTCCAAGGACAAGACGAGTGCCTTGAG...TGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp GGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGGATGAAGAGACCACCTATTaGCACGCTGCTCGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: GQSGVKTRPFSPTLPVMDEETTY*HAARKG
Trigger: GCCTTTCCGAGCAGCGTGCAAATAGGTGGTCTCTTC...ATCCATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp TACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAAGATGCCAAACTCATaGGGAGGCTGGTCGCTGGGT +
Preference number: 5 (lower is better)
Translates to: YSLWAVRRQDAAILSHTPKMPNS*GGWSLG
Trigger: ACCCAGCGACCAGCCTCCCAATGAGTTTGGCATCTT...GGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp CAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGAATTTGCCCTTGGATTaGCGGACACGAGCTACTCCC +
Preference number: 5 (lower is better)
Translates to: QPLGSQASRRGHSLPHSQNLPLD*RTRATP
Trigger: GGGAGTAGCTCGTGTCCGCAAATCCAAGGGCAAATT...CTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp AAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGAAGGCAAATTTGCCCTaGGATTTGCGGACACGAGCT +
Preference number: 5 (lower is better)
Translates to: KTRAWRVPQGCVSTSHQQKANLP*DLRTRA
Trigger: AGCTCGTGTCCGCAAATCCAAGGGCAAATTTGCCTT...CTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCGCACTCGTCTTGTCCTaGCTTCCAGAGTCCTTGGGT +
Preference number: 5 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPALVLS*LPESLG
Trigger: ACCCAAGGACTCTGGAAGCAAGGACAAGACGAGTGC...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000530497.1
CDS-3UTR CAA 90 bp AAAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACACTGATGTGCATGGCTTaGGGCCACTGCTCACTCATA +
Preference number: 5 (lower is better)
Translates to: KDPRVACPSGLRFHQSPTLMCMA*GHCSLI
Trigger: TATGAGTGAGCAGTGGCCCAAAGCCATGCACATCAG...TGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS GCA 90 bp CCAAGCCCAAGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTaGTCAGGCTCAAGGCACTCGTCTTGTCCTTGGAGTCACCTCCCC +
Preference number: 5 (lower is better)
Translates to: PSPSRQPECRRRLLH*SGSRHSSCPWSHLP
Trigger: GGGGAGGTGACTCCAAGGACAAGACGAGTGCCTTGAGCCTGAGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCTTGGGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393127.6
ENST00000525187.5
ENST00000533094.1
CDS-3UTR CAA 90 bp AAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGATTCCCTGTCAGCCCTaGAATTCGAACCTGTTTGAG +
Preference number: 5 (lower is better)
Translates to: KTRAWRVPQGCVSTSHQQIPCQP*NSNLFE
Trigger: CTCAAACAGGTTCGAATTCAAGGGCTGACAGGGAAT...CTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCAGTGTGTACAGCCTTaGGGCAGTCAGGCGTCAAGA +
Preference number: 5 (lower is better)
Translates to: SSVYSLWAVRRQDAAILSQCVQP*GSQASR
Trigger: TCTTGACGCCTGACTGCCCAAAGGCTGTACACACTG...GGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp AAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGGTTACAGCAAAACTGTaGGCTGTCTCAATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: KTRAWRVPQGCVSTSHQQVTAKL*AVSMLS
Trigger: GGACAACATTGAGACAGCCAACAGTTTTGCTGTAAC...CTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp AAAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGGGAACAGAAGGCGTTaGTTACAGCAAAACTGTTGG +
Preference number: 5 (lower is better)
Translates to: KDPRVACPSGLRFHQSPTGNRRR*LQQNCW
Trigger: CCAACAGTTTTGCTGTAACAAACGCCTTCTGTTCCC...TGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp GCAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCGAGCAGAGGTGTACTTaGGAGGAGTCTCAGATCCTG +
Preference number: 5 (lower is better)
Translates to: AVPVCTAFGQSGVKTRPFEQRCT*EESQIL
Trigger: CAGGATCTGAGACTCCTCCAAAGTACACCTCTGCTC...GAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp CAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGATTCCCTGTCAGCCCTaGAATTCGAACCTGTTTGAG +
Preference number: 5 (lower is better)
Translates to: QPLGSQASRRGHSLPHSQIPCQP*NSNLFE
Trigger: CTCAAACAGGTTCGAATTCAAGGGCTGACAGGGAAT...CTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp GTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTAATTTGCCCTTGGATTaGCGGACACGAGCTACTCCC +
Preference number: 5 (lower is better)
Translates to: VYSLWAVRRQDAAILSHTNLPLD*RTRATP
Trigger: GGGAGTAGCTCGTGTCCGCAAATCCAAGGGCAAATT...AGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCAAGGCAAATTTGCCCTaGGATTTGCGGACACGAGCT +
Preference number: 5 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPKANLP*DLRTRA
Trigger: AGCTCGTGTCCGCAAATCCAAGGGCAAATTTGCCTT...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp AGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCCAGTGTGTACAGCCTTaGGGCAGTCAGGCGTCAAGA +
Preference number: 5 (lower is better)
Translates to: SSSVYSLWAVRRQDAAILQCVQP*GSQASR
Trigger: TCTTGACGCCTGACTGCCCAAAGGCTGTACACACTG...GAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp AAAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAACTGCAGCACAGAGATaGAATGGCGAATGGGATCTT +
Preference number: 5 (lower is better)
Translates to: KDPRVACPSGLRFHQSPTTAAQR*NGEWDL
Trigger: AAGATCCCATTCGCCATTCAATCTCTGTGCTGCAGT...TGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp GGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGGATGGGAACAGAAGGCGTTaGTTACAGCAAAACTGTTGG +
Preference number: 5 (lower is better)
Translates to: GQSGVKTRPFSPTLPVMDGNRRR*LQQNCW
Trigger: CCAACAGTTTTGCTGTAACAAACGCCTTCTGTTCCC...ATCCATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp AAAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAATAGCAGCTGTGTCATaGCCAAGAGTTGGTACATCT +
Preference number: 5 (lower is better)
Translates to: KDPRVACPSGLRFHQSPTIAAVS*PRVGTS
Trigger: AGATGTACCAACTCTTGGCAATGACACAGCTGCTAT...TGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCACTGCAGCACAGAGATaGAATGGCGAATGGGATCTT +
Preference number: 5 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPTAAQR*NGEWDL
Trigger: AAGATCCCATTCGCCATTCAATCTCTGTGCTGCAGT...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp CATTGCCAAGCCCAAGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTGCTGGTTTACAGGAGTTCTaGGAGTCACCTCCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: HCQAQAANQNVEDACYIAGLQEF*ESPPPL
Trigger: CAGCGGGGGAGGTGACTCCAAGAACTCCTGTAAACC...AGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCTTGGGCTTGGCAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525942.1
CDS-3UTR CAA 90 bp ACCAGATCATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCAGCCCCTGCCGCATCCTaGCAGGTTCGTGAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: TRSSAASTNRLKYISSTPAPAAS*QVREED
Trigger: GTCCTCCTCACGAACCTGCAAGGATGCGGCAGGGGC...TGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGATGATCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR CAA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCGTTACAGCAAAACTGTaGGCTGTCTCAATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPVTAKL*AVSMLS
Trigger: GGACAACATTGAGACAGCCAACAGTTTTGCTGTAAC...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TCCCGCTCTCAGCCAAAGGATTGGTTTAGCAAAGACCCGCGCGTGGCGTGTCCCATAGCAGCTGTGTCATaGCCAAGAGTTGGTACATCT +
Preference number: 5 (lower is better)
Translates to: SRSQPKDWFSKDPRVACPIAAVS*PRVGTS
Trigger: AGATGTACCAACTCTTGGCAATGACACAGCTGCTAT...GGGACACGCCACGCGCGGGTCTTTGCTAAACCAATCCTTTGGCTGAGAGCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCAGGAGAAAGGCAAATTaGCCCTTGGATTTGCGGACA +
Preference number: 5 (lower is better)
Translates to: SSVYSLWAVRRQDAAILSRRKAN*PLDLRT
Trigger: TGTCCGCAAATCCAAGGGCAAATTTGCCTTTCTCCT...GGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTGAGCTCATGCACACGTaGCTGCTGCTGATGTCCGGC +
Preference number: 5 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTELMHT*LLLMSG
Trigger: GCCGGACATCAGCAGCAGCAACGTGTGCATGAGCTC...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp CTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATACTGCAGCACAGAGATaGAATGGCGAATGGGATCTT +
Preference number: 5 (lower is better)
Translates to: LWAVRRQDAAILSHTPSDTAAQR*NGEWDL
Trigger: AAGATCCCATTCGCCATTCAATCTCTGTGCTGCAGT...ATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR CAA 90 bp TCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCTTTTTCCTGAGGGACTaGTGTGTGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: SSVYSLWAVRRQDAAILSFFLRD*CVCVCV
Trigger: CACACACACACACACACACAAGTCCCTCAGGAAAAA...GGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR CAA 90 bp ACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGGCACTCGTCTTGTCCTaGGAGTCACCTCCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: TANPELCLIAVPVCTAFGALVLS*ESPPPL
Trigger: CAGCGGGGGAGGTGACTCCAAGGACAAGACGAGTGC...CCCAAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTGCCCCTGCCGCATCCTaGCAGGTTCGTGAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMAAPAAS*QVREED
Trigger: GTCCTCCTCACGAACCTGCAAGGATGCGGCAGGGGC...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000393127.6
CDS-3UTR CAA 90 bp TACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCTGGAATCCAGTAACATaGGCTCCACCATGTATAAAC +
Preference number: 5 (lower is better)
Translates to: YSLWAVRRQDAAILSHTPWNPVT*APPCIN
Trigger: GTTTATACATGGTGGAGCCAATGTTACTGGATTCCA...GGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp TGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACATAGCAGCTGTGTCATaGCCAAGAGTTGGTACATCT +
Preference number: 5 (lower is better)
Translates to: CVQPLGSQASRRGHSLPHIAAVS*PRVGTS
Trigger: AGATGTACCAACTCTTGGCAATGACACAGCTGCTAT...GTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp AAGACCCGCGCGTGGCGTGTCCCTCAGGGCTGCGTTTCCACCAGTCACCAACAGTTATACTGTTTAAGATaGCTCTTACTGCAGCACAGA +
Preference number: 5 (lower is better)
Translates to: KTRAWRVPQGCVSTSHQQLYCLR*LLLQHR
Trigger: TCTGTGCTGCAGTAAGAGCAATCTTAAACAGTATAA...CTGTTGGTGACTGGTGGAAACGCAGCCCTGAGGGACACGCCACGCGCGGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp CATTGCCAAGCCCAAGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTGCTAAGGCAAATTTGCCCTaGGATTTGCGGACACGAGCT +
Preference number: 5 (lower is better)
Translates to: HCQAQAANQNVEDACYIAKANLP*DLRTRA
Trigger: AGCTCGTGTCCGCAAATCCAAGGGCAAATTTGCCTT...AGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCTTGGGCTTGGCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525942.1
CDS-3UTR CAA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTCTCAAGGCACTCGTCTaGTCCTTGCTTCCAGAGTCC +
Preference number: 5 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTLKALV*SLLPES
Trigger: GGACTCTGGAAGCAAGGACAAGACGAGTGCCTTGAG...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000530497.1
CDS-3UTR CAA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTCTCAAGGCACTCGTCTaGTCCTTGCTTCCAGAGTCC +
Preference number: 5 (lower is better)
Translates to: RSERSPGRNKQAPGHEGALKALV*SLLPES
Trigger: GGACTCTGGAAGCAAGGACAAGACGAGTGCCTTGAG...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000530497.1
CDS-3UTR CAA 90 bp CAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGATGGATAATCTGGCTTaGTTTCTTATGGCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: QPLGSQASRRGHSLPHSQMDNLA*FLMASE
Trigger: TTCTGAAGCCATAAGAAACAAAGCCAGATTATCCAT...CTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp CAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTTATACTGTTTAAGATaGCTCTTACTGCAGCACAGA +
Preference number: 5 (lower is better)
Translates to: QPLGSQASRRGHSLPHSQLYCLR*LLLQHR
Trigger: TCTGTGCTGCAGTAAGAGCAATCTTAAACAGTATAA...CTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS GCA 90 bp GGCTGGTCGCTGGGTCCTTCCTTTCCGTCCTCTGGCTCTTCTGTGTaGCACTCATATGGACTAAATCTACTAACTAGGAATAAGACCACG +
Preference number: 5 (lower is better)
Translates to: GWSLGPSFPSSGSSV*HSYGLNLLTRNKTT
Trigger: CGTGGTCTTATTCCTAGTTAGTAGATTTAGTCCATATGAGTGGCACACAGAAGAGCCAGAGGACGGAAAGGAAGGACCCAGCGACCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000525187.5
ENST00000530497.1
CDS CCA 90 bp CTCAAGAGTGCTCCTCGTAACGAAGGTCTTAGTTGCAGCACAAACTaGCTCTCCCCCTCAGTAGGGAAACTTGGTGTGATGAGGGAGATA +
Preference number: 5 (lower is better)
Translates to: LKSAPRNEGLSCSTN*LSPSVGKLGVMREI
Trigger: TATCTCCCTCATCACACCAAGTTTCCCTACTGAGGGGGAGAGCCAGTTTGTGCTGCAACTAAGACCTTCGTTACGAGGAGCACTCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000282499.10
ENST00000393125.6
ENST00000393127.6
ENST00000428631.6
ENST00000525032.1
ENST00000525187.5
ENST00000530497.1
ENST00000531011.5
CDS-3UTR CAA 90 bp ACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGGAAGAGACCACCTATTaGCACGCTGCTCGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: TANPELCLIAVPVCTAFGEETTY*HAARKG
Trigger: GCCTTTCCGAGCAGCGTGCAAATAGGTGGTCTCTTC...CCCAAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp TGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACGACATGCCAACCATTTaGTCCTGCTTTTTCCATAAT +
Preference number: 5 (lower is better)
Translates to: CVQPLGSQASRRGHSLPHDMPTI*SCFFHN
Trigger: ATTATGGAAAAAGCAGGACAAAATGGTTGGCATGTC...GTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp AGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTCAGCGATCCATTAGTTaGATTACCATAGGTGTATTA +
Preference number: 5 (lower is better)
Translates to: SLWAVRRQDAAILSHTPSQRSIS*ITIGVL
Trigger: TAATACACCTATGGTAATCAAACTAATGGATCGCTG...ACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTAATTTGCCCTTGGATTaGCGGACACGAGCTACTCCC +
Preference number: 5 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTNLPLD*RTRATP
Trigger: GGGAGTAGCTCGTGTCCGCAAATCCAAGGGCAAATT...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp CATTGCCAAGCCCAAGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTGCTAGGAGAAAGGCAAATTaGCCCTTGGATTTGCGGACA +
Preference number: 5 (lower is better)
Translates to: HCQAQAANQNVEDACYIARRKAN*PLDLRT
Trigger: TGTCCGCAAATCCAAGGGCAAATTTGCCTTTCTCCT...AGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCTTGGGCTTGGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525942.1
CDS-3UTR CAA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCGCACTCGTCTTGTCCTaGCTTCCAGAGTCCTTGGGT +
Preference number: 5 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFALVLS*LPESLG
Trigger: ACCCAAGGACTCTGGAAGCAAGGACAAGACGAGTGC...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000530497.1
CDS-3UTR CAA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTGAGCTCATGCACACGTaGCTGCTGCTGATGTCCGGC +
Preference number: 5 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMAELMHT*LLLMSG
Trigger: GCCGGACATCAGCAGCAGCAACGTGTGCATGAGCTC...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp ACCAGATCATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCAGAAGAGACCACCTATTaGCACGCTGCTCGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: TRSSAASTNRLKYISSTPEETTY*HAARKG
Trigger: GCCTTTCCGAGCAGCGTGCAAATAGGTGGTCTCTTC...TGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGATGATCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR CAA 90 bp TGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCAAGAGAAATATCCTaGAATCCCAAGTTTGCAATG +
Preference number: 5 (lower is better)
Translates to: CVQPLGSQASRRGHSLPHSREIS*NPKFAM
Trigger: CATTGCAAACTTGGGATTCAAGGATATTTCTCTTGA...GTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCGAGCAGAGGTGTACTTaGGAGGAGTCTCAGATCCTG +
Preference number: 5 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFEQRCT*EESQIL
Trigger: CAGGATCTGAGACTCCTCCAAAGTACACCTCTGCTC...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp CAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGGATAATCAGCATTTCCTCTCCTaGAGATATCAATTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: QSGVKTRPFSPTLPVMDNQHFLS*RYQFSA
Trigger: GGCAGAAAATTGATATCTCAAGGAGAGGAAATGCTG...ATTATCCATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGAAGATGCCAAACTCATaGGGAGGCTGGTCGCTGGGT +
Preference number: 5 (lower is better)
Translates to: WIEVREVLEEISKRQVMKKMPNS*GGWSLG
Trigger: ACCCAGCGACCAGCCTCCCAATGAGTTTGGCATCTT...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTAAGGCAAATTTGCCCTaGGATTTGCGGACACGAGCT +
Preference number: 5 (lower is better)
Translates to: RSERSPGRNKQAPGHEGAKANLP*DLRTRA
Trigger: AGCTCGTGTCCGCAAATCCAAGGGCAAATTTGCCTT...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGCAGTGTGTACAGCCTTaGGGCAGTCAGGCGTCAAGA +
Preference number: 5 (lower is better)
Translates to: WIEVREVLEEISKRQVMKQCVQP*GSQASR
Trigger: TCTTGACGCCTGACTGCCCAAAGGCTGTACACACTG...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCCTGATGTGCATGGCTTaGGGCCACTGCTCACTCATA +
Preference number: 5 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFLMCMA*GHCSLI
Trigger: TATGAGTGAGCAGTGGCCCAAAGCCATGCACATCAG...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp GCAGTTCCAGTGTGTACAGCCTTTGGGCAGTCAGGCGTCAAGACGCGGCCATTCAACCTTCTCTATAGGTaGCTAAATTCTGGGTATTCT +
Preference number: 5 (lower is better)
Translates to: AVPVCTAFGQSGVKTRPFNLLYR*LNSGYS
Trigger: AGAATACCCAGAATTTAGCAACCTATAGAGAAGGTT...GAATGGCCGCGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp TATCTACAAGGGATTTCTTTCATAATGAATGAAGTGGAGGGATATCATAGGTCCGCCCCTGCCGCATCCTaGCAGGTTCGTGAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: YLQGISFIMNEVEGYHRSAPAAS*QVREED
Trigger: GTCCTCCTCACGAACCTGCAAGGATGCGGCAGGGGC...GGACCTATGATATCCCTCCACTTCATTCATTATGAAAGAAATCCCTTGTAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393125.6
CDS-3UTR CAA 90 bp CAGTCAGGCGTCAAGACGCGGCCATTCTCTCCCACACTCCCAGTGATGGATAATTGTCATTGCCAAGAGTaGGTACATCTTGAATCAAGA +
Preference number: 5 (lower is better)
Translates to: QSGVKTRPFSPTLPVMDNCHCQE*VHLESR
Trigger: TCTTGATTCAAGATGTACCAACTCTTGGCAATGACA...ATTATCCATCACTGGGAGTGTGGGAGAGAATGGCCGCGTCTTGACGCCTGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp ATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTAAGATGCCAAACTCATaGGGAGGCTGGTCGCTGGGT +
Preference number: 5 (lower is better)
Translates to: MTANPELCLIAVPVCTAFKMPNS*GGWSLG
Trigger: ACCCAGCGACCAGCCTCCCAATGAGTTTGGCATCTT...AAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTAGGAGAAAGGCAAATTaGCCCTTGGATTTGCGGACA +
Preference number: 5 (lower is better)
Translates to: RSERSPGRNKQAPGHEGARRKAN*PLDLRT
Trigger: TGTCCGCAAATCCAAGGGCAAATTTGCCTTTCTCCT...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTTTTTTCCTGAGGGACTaGTGTGTGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTFFLRD*CVCVCV
Trigger: CACACACACACACACACACAAGTCCCTCAGGAAAAA...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGCTCAAGGCACTCGTCTaGTCCTTGGAGTCACCTCCC +
Preference number: 5 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMLKALV*SLESPP
Trigger: GGGAGGTGACTCCAAGGACAAGACGAGTGCCTTGAG...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS-3UTR CAA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTGTTACAGCAAAACTGTaGGCTGTCTCAATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: RSERSPGRNKQAPGHEGAVTAKL*AVSMLS
Trigger: GGACAACATTGAGACAGCCAACAGTTTTGCTGTAAC...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCATTCCCTGTCAGCCCTaGAATTCGAACCTGTTTGAG +
Preference number: 5 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFIPCQP*NSNLFE
Trigger: CTCAAACAGGTTCGAATTCAAGGGCTGACAGGGAAT...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCAAAGATGCCAAACTCATaGGGAGGCTGGTCGCTGGGT +
Preference number: 5 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNAKMPNS*GGWSLG
Trigger: ACCCAGCGACCAGCCTCCCAATGAGTTTGGCATCTT...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TCCGATGCAATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTAAGGCAAATTTGCCCTaGGATTTGCGGACACGAGCT +
Preference number: 5 (lower is better)
Translates to: SDAMTANPELCLIAVPVCKANLP*DLRTRA
Trigger: AGCTCGTGTCCGCAAATCCAAGGGCAAATTTGCCTT...ACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATTGCATCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCGAAGAGACCACCTATTaGCACGCTGCTCGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: MFWRHRLACSRTSTTILSEETTY*HAARKG
Trigger: GCCTTTCCGAGCAGCGTGCAAATAGGTGGTCTCTTC...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TCCGATGCAATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTGGGAACAGAAGGCGTTaGTTACAGCAAAACTGTTGG +
Preference number: 5 (lower is better)
Translates to: SDAMTANPELCLIAVPVCGNRRR*LQQNCW
Trigger: CCAACAGTTTTGCTGTAACAAACGCCTTCTGTTCCC...ACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATTGCATCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATGAGCAGAGGTGTACTTaGGAGGAGTCTCAGATCCTG +
Preference number: 5 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNEQRCT*EESQIL
Trigger: CAGGATCTGAGACTCCTCCAAAGTACACCTCTGCTC...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCAGAGCAGAGGTGTACTTaGGAGGAGTCTCAGATCCTG +
Preference number: 5 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNAEQRCT*EESQIL
Trigger: CAGGATCTGAGACTCCTCCAAAGTACACCTCTGCTC...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTCAGCATTTCCTCTCCTaGAGATATCAATTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: REELRTEEIVYAVLHVLLQHFLS*RYQFSA
Trigger: GGCAGAAAATTGATATCTCAAGGAGAGGAAATGCTG...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGAATTTGCCCTTGGATTaGCGGACACGAGCTACTCCC +
Preference number: 5 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMNLPLD*RTRATP
Trigger: GGGAGTAGCTCGTGTCCGCAAATCCAAGGGCAAATT...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCACTGATGTGCATGGCTTaGGGCCACTGCTCACTCATA +
Preference number: 5 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNALMCMA*GHCSLI
Trigger: TATGAGTGAGCAGTGGCCCAAAGCCATGCACATCAG...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTTTTTCCATAATAGCTaGGAGTATCGAGTATCCCCT +
Preference number: 5 (lower is better)
Translates to: REELRTEEIVYAVLHVLLFFHNS*EYRVSP
Trigger: AGGGGATACTCGATACTCCAAGCTATTATGGAAAAA...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp AGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGGGGCTTTTTTCCATAATAGCTaGGAGTATCGAGTATCCCCT +
Preference number: 5 (lower is better)
Translates to: RSERSPGRNKQAPGHEGAFFHNS*EYRVSP
Trigger: AGGGGATACTCGATACTCCAAGCTATTATGGAAAAA...AGCCCCTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTGACATGCCAACCATTTaGTCCTGCTTTTTCCATAAT +
Preference number: 5 (lower is better)
Translates to: REELRTEEIVYAVLHVLLDMPTI*SCFFHN
Trigger: ATTATGGAAAAAGCAGGACAAAATGGTTGGCATGTC...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTGACATGCCAACCATTTaGTCCTGCTTTTTCCATAAT +
Preference number: 5 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTDMPTI*SCFFHN
Trigger: ATTATGGAAAAAGCAGGACAAAATGGTTGGCATGTC...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCTGGAATCCAGTAACATaGGCTCCACCATGTATAAAC +
Preference number: 5 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFWNPVT*APPCIN
Trigger: GTTTATACATGGTGGAGCCAATGTTACTGGATTCCA...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTGAGCAGAGGTGTACTTaGGAGGAGTCTCAGATCCTG +
Preference number: 5 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFEQRCT*EESQIL
Trigger: CAGGATCTGAGACTCCTCCAAAGTACACCTCTGCTC...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCCAGCATTTCCTCTCCTaGAGATATCAATTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFQHFLS*RYQFSA
Trigger: GGCAGAAAATTGATATCTCAAGGAGAGGAAATGCTG...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTATTCCCTGTCAGCCCTaGAATTCGAACCTGTTTGAG +
Preference number: 5 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMAIPCQP*NSNLFE
Trigger: CTCAAACAGGTTCGAATTCAAGGGCTGACAGGGAAT...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTTGTCATTGCCAAGAGTaGGTACATCTTGAATCAAGA +
Preference number: 5 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTCHCQE*VHLESR
Trigger: TCTTGATTCAAGATGTACCAACTCTTGGCAATGACA...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTAGGAGAAAGGCAAATTaGCCCTTGGATTTGCGGACA +
Preference number: 5 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMARRKAN*PLDLRT
Trigger: TGTCCGCAAATCCAAGGGCAAATTTGCCTTTCTCCT...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTTTTTTCCTGAGGGACTaGTGTGTGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMAFFLRD*CVCVCV
Trigger: CACACACACACACACACACAAGTCCCTCAGGAAAAA...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp ATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCACCACTCCCTTTACTTACAGGCGTTaGTTACAGCAAAACTGTTGG +
Preference number: 5 (lower is better)
Translates to: ICSVNQPTQIYILHTTTPFTYRR*LQQNCW
Trigger: CCAACAGTTTTGCTGTAACAAACGCCTGTAAGTAAA...GGGAGTGGTGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS TCA 90 bp GCAGAGGTGTACTTTGGAGGAGTCTCAGATCCTGGATACTCTCTCTaGTCTAGTTTCTTCCAGCGATCCATTAGTTTGATTACCATAGGT +
Preference number: 5 (lower is better)
Translates to: AEVYFGGVSDPGYSL*SSFFQRSISLITIG
Trigger: ACCTATGGTAATCAAACTAATGGATCGCTGGAAGAAACTAGATCAGAGAGAGTATCCAGGATCTGAGACTCCTCCAAAGTACACCTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282499.10
ENST00000393125.6
ENST00000393127.6
ENST00000428631.6
ENST00000525187.5
ENST00000527687.1
ENST00000530497.1
CDS-3UTR CAA 90 bp ATCTACCCTTGGAAATGGAGTGATATAATTCCATCATTTACATACAGTGACCTCGAAGAGACCACCTATTaGCACGCTGCTCGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: IYPWKWSDIIPSFTYSDLEETTY*HAARKG
Trigger: GCCTTTCCGAGCAGCGTGCAAATAGGTGGTCTCTTC...GAGGTCACTGTATGTAAATGATGGAATTATATCACTCCATTTCCAAGGGTAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp ATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTGTTACAGCAAAACTGTaGGCTGTCTCAATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: MTANPELCLIAVPVCTAFVTAKL*AVSMLS
Trigger: GGACAACATTGAGACAGCCAACAGTTTTGCTGTAAC...AAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCAGGGAACAGAAGGCGTTaGTTACAGCAAAACTGTTGG +
Preference number: 5 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNAGNRRR*LQQNCW
Trigger: CCAACAGTTTTGCTGTAACAAACGCCTTCTGTTCCC...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp AGGTCCGATGCAATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTTTTTCCATAATAGCTaGGAGTATCGAGTATCCCCT +
Preference number: 5 (lower is better)
Translates to: RSDAMTANPELCLIAVPVFFHNS*EYRVSP
Trigger: AGGGGATACTCGATACTCCAAGCTATTATGGAAAAA...CACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATTGCATCGGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp AGGTCCGATGCAATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGGACATGCCAACCATTTaGTCCTGCTTTTTCCATAAT +
Preference number: 5 (lower is better)
Translates to: RSDAMTANPELCLIAVPVDMPTI*SCFFHN
Trigger: ATTATGGAAAAAGCAGGACAAAATGGTTGGCATGTC...CACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATTGCATCGGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp AGGGAGGAGTTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTACAAACTTCTTCTCTaGTCTTCTGTCAAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: REELRTEEIVYAVLHVLLYKLLL*SSVKFF
Trigger: GAAGAACTTGACAGAAGACAAGAGAAGAAGTTTGTA...AAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAACTCCTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTTCAAGAGAAATATCCTaGAATCCCAAGTTTGCAATG +
Preference number: 5 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTSREIS*NPKFAM
Trigger: CATTGCAAACTTGGGATTCAAGGATATTTCTCTTGA...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATATTCCCTGTCAGCCCTaGAATTCGAACCTGTTTGAG +
Preference number: 5 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNIPCQP*NSNLFE
Trigger: CTCAAACAGGTTCGAATTCAAGGGCTGACAGGGAAT...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp AGGTCCGATGCAATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTCATTGCCAAGAGTaGGTACATCTTGAATCAAGA +
Preference number: 5 (lower is better)
Translates to: RSDAMTANPELCLIAVPVCHCQE*VHLESR
Trigger: TCTTGATTCAAGATGTACCAACTCTTGGCAATGACA...CACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATTGCATCGGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp ATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTATAGCAGCTGTGTCATaGCCAAGAGTTGGTACATCT +
Preference number: 5 (lower is better)
Translates to: MTANPELCLIAVPVCTAFIAAVS*PRVGTS
Trigger: AGATGTACCAACTCTTGGCAATGACACAGCTGCTAT...AAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGAGGAGAAAGGCAAATTaGCCCTTGGATTTGCGGACA +
Preference number: 5 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMRRKAN*PLDLRT
Trigger: TGTCCGCAAATCCAAGGGCAAATTTGCCTTTCTCCT...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp CGCAGTATGGTAAGTGCCGTGATGGGGGAAAGACATGAAAAAGGGCACCTAACTATGGATAATCTGGCTTaGTTTCTTATGGCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: RSMVSAVMGERHEKGHLTMDNLA*FLMASE
Trigger: TTCTGAAGCCATAAGAAACAAAGCCAGATTATCCAT...AGTTAGGTGCCCTTTTTCATGTCTTTCCCCCATCACGGCACTTACCATACTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATTCTGGTAGTCCAGAGTaGGTCATCCAAGAAGAATCC +
Preference number: 5 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNSGSPE*VIQEES
Trigger: GGATTCTTCTTGGATGACCAACTCTGGACTACCAGA...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp ACCAGATCATCTGCAGCGTCAACCAACCGACTCAAATATATATCCTCCACACCAAATGTGAGGAGGTATTaGAAACATGCACTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: TRSSAASTNRLKYISSTPNVRRY*KHALPS
Trigger: GGAAGGAAGTGCATGTTTCAAATACCTCCTCACATT...TGGTGTGGAGGATATATATTTGAGTCGGTTGGTTGACGCTGCAGATGATCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS CCA 90 bp AAGCCAAGAGTGAACAACAGAACTTGGCATACAATTACTTGCCAATaGTGTGGTACTGATTACAAGTCCCCTGTCTGTGTCATACAGGAA +
Preference number: 5 (lower is better)
Translates to: KPRVNNRTWHTITCQ*CGTDYKSPVCVIQE
Trigger: TTCCTGTATGACACAGACAGGGGACTTGTAATCAGTACCACACCATTGGCAAGTAATTGTATGCCAAGTTCTGTTGTTCACTCTTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531011.5
CDS-3UTR CAA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCGAAGAGACCACCTATTaGCACGCTGCTCGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILEETTY*HAARKG
Trigger: GCCTTTCCGAGCAGCGTGCAAATAGGTGGTCTCTTC...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp TGGATAGAAGTGAGAGAAGTCCTGGAAGAAATAAGCAAGCGCCAGGTCATGAAGTTTTTCCATAATAGCTaGGAGTATCGAGTATCCCCT +
Preference number: 5 (lower is better)
Translates to: WIEVREVLEEISKRQVMKFFHNS*EYRVSP
Trigger: AGGGGATACTCGATACTCCAAGCTATTATGGAAAAA...CTTCATGACCTGGCGCTTGCTTATTTCTTCCAGGACTTCTCTCACTTCTATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp ACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTGGGTACAAACTTCTTCTCTaGTCTTCTGTCAAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: TANPELCLIAVPVCTAFGYKLLL*SSVKFF
Trigger: GAAGAACTTGACAGAAGACAAGAGAAGAAGTTTGTA...CCCAAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTTGGAATCCAGTAACATaGGCTCCACCATGTATAAAC +
Preference number: 5 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMAWNPVT*APPCIN
Trigger: GTTTATACATGGTGGAGCCAATGTTACTGGATTCCA...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp ATCTACCCTTGGAAATGGAGTGATATAATTCCATCATTTACATACAGTGACCTCGAGCAGAGGTGTACTTaGGAGGAGTCTCAGATCCTG +
Preference number: 5 (lower is better)
Translates to: IYPWKWSDIIPSFTYSDLEQRCT*EESQIL
Trigger: CAGGATCTGAGACTCCTCCAAAGTACACCTCTGCTC...GAGGTCACTGTATGTAAATGATGGAATTATATCACTCCATTTCCAAGGGTAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp TTACGCACTGAGGAAATAGTCTATGCAGTGCTCCATGTGCTGCTTTGGAGGTTCTTATACTGTTTAAGATaGCTCTTACTGCAGCACAGA +
Preference number: 5 (lower is better)
Translates to: LRTEEIVYAVLHVLLWRFLYCLR*LLLQHR
Trigger: TCTGTGCTGCAGTAAGAGCAATCTTAAACAGTATAA...GAACCTCCAAAGCAGCACATGGAGCACTGCATAGACTATTTCCTCAGTGCGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATCTGTTCAGAGAAGCATaGAAGACGATGGCGCTAAAA +
Preference number: 5 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNLFREA*KTMALK
Trigger: TTTTAGCGCCATCGTCTTCAATGCTTCTCTGAACAG...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428631.6
CDS GCA 90 bp CACATAAAGCCAAGAGTGAACAACAGAACTTGGCATACAATTACTTaGCAATGGTGTGGTACTGATTACAAGTCCCCTGTCTGTGTCATA +
Preference number: 5 (lower is better)
Translates to: HIKPRVNNRTWHTIT*QWCGTDYKSPVCVI
Trigger: TATGACACAGACAGGGGACTTGTAATCAGTACCACACCATTGGCAAGTAATTGTATGCCAAGTTCTGTTGTTCACTCTTGGCTTTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531011.5
CDS-3UTR CAA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATTGGAATCCAGTAACATaGGCTCCACCATGTATAAAC +
Preference number: 5 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNWNPVT*APPCIN
Trigger: GTTTATACATGGTGGAGCCAATGTTACTGGATTCCA...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp TCCGATGCAATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTCAGCGATCCATTAGTTaGATTACCATAGGTGTATTA +
Preference number: 5 (lower is better)
Translates to: SDAMTANPELCLIAVPVCQRSIS*ITIGVL
Trigger: TAATACACCTATGGTAATCAAACTAATGGATCGCTG...ACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCATTGCATCGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATCAGCATTTCCTCTCCTaGAGATATCAATTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNQHFLS*RYQFSA
Trigger: GGCAGAAAATTGATATCTCAAGGAGAGGAAATGCTG...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp AGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTGCATGGCTTGTCATTGCCAAGAGTaGGTACATCTTGAATCAAGA +
Preference number: 5 (lower is better)
Translates to: SSPSNGIHSLNEPLMCMACHCQE*VHLESR
Trigger: TCTTGATTCAAGATGTACCAACTCTTGGCAATGACA...AGCCATGCACATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTGGACTACCGTTTTCAACATAGCAGCTGTGTCATaGCCAAGAGTTGGTACATCT +
Preference number: 5 (lower is better)
Translates to: FIMNEVEGYHRSWTTVFNIAAVS*PRVGTS
Trigger: AGATGTACCAACTCTTGGCAATGACACAGCTGCTAT...GTTGAAAACGGTAGTCCAGGACCTATGATATCCCTCCACTTCATTCATTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp ACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATTGTGTGGAATAATAGATAAAGTTACAGCAAAACTGTaGGCTGTCTCAATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: TALGEVTRLVSLCGIIDKVTAKL*AVSMLS
Trigger: GGACAACATTGAGACAGCCAACAGTTTTGCTGTAAC...TTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR CAA 90 bp ATCTACCCTTGGAAATGGAGTGATATAATTCCATCATTTACATACAGTGACCTCGGGAACAGAAGGCGTTaGTTACAGCAAAACTGTTGG +
Preference number: 5 (lower is better)
Translates to: IYPWKWSDIIPSFTYSDLGNRRR*LQQNCW
Trigger: CCAACAGTTTTGCTGTAACAAACGCCTTCTGTTCCC...GAGGTCACTGTATGTAAATGATGGAATTATATCACTCCATTTCCAAGGGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp ATGACAGCCAATCCTGAACTTTGTCTGATTGCAGTTCCAGTGTGTACAGCCTTTTACAAACTTCTTCTCTaGTCTTCTGTCAAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: MTANPELCLIAVPVCTAFYKLLL*SSVKFF
Trigger: GAAGAACTTGACAGAAGACAAGAGAAGAAGTTTGTA...AAAGGCTGTACACACTGGAACTGCAATCAGACAAAGTTCAGGATTGGCTGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393127.6
ENST00000525187.5
CDS-3UTR CAA 90 bp TATCTACAAGGGATTTCTTTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTCTGGTAGTCCAGAGTaGGTCATCCAAGAAGAATCC +
Preference number: 5 (lower is better)
Translates to: YLQGISFIMNEVEGYHRSSGSPE*VIQEES
Trigger: GGATTCTTCTTGGATGACCAACTCTGGACTACCAGA...GGACCTATGATATCCCTCCACTTCATTCATTATGAAAGAAATCCCTTGTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp ATCTACCCTTGGAAATGGAGTGATATAATTCCATCATTTACATACAGTGACCTCGTTACAGCAAAACTGTaGGCTGTCTCAATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: IYPWKWSDIIPSFTYSDLVTAKL*AVSMLS
Trigger: GGACAACATTGAGACAGCCAACAGTTTTGCTGTAAC...GAGGTCACTGTATGTAAATGATGGAATTATATCACTCCATTTCCAAGGGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp TATCTACAAGGGATTTCTTTCATAATGAATGAAGTGGAGGGATATCATAGGTCCGTTACAGCAAAACTGTaGGCTGTCTCAATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: YLQGISFIMNEVEGYHRSVTAKL*AVSMLS
Trigger: GGACAACATTGAGACAGCCAACAGTTTTGCTGTAAC...GGACCTATGATATCCCTCCACTTCATTCATTATGAAAGAAATCCCTTGTAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCGGGAACAGAAGGCGTTaGTTACAGCAAAACTGTTGG +
Preference number: 5 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILGNRRR*LQQNCW
Trigger: CCAACAGTTTTGCTGTAACAAACGCCTTCTGTTCCC...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp ATGTCTAGCCAATTCCATCTGTGTTGGGAGTTTTCAGCTGAATCTGGGGATAATTACAAACTTCTTCTCTaGTCTTCTGTCAAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: MSSQFHLCWEFSAESGDNYKLLL*SSVKFF
Trigger: GAAGAACTTGACAGAAGACAAGAGAAGAAGTTTGTA...ATTATCCCCAGATTCAGCTGAAAACTCCCAACACAGATGGAATTGGCTAGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGTACAAACTTCTTCTCTaGTCTTCTGTCAAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMYKLLL*SSVKFF
Trigger: GAAGAACTTGACAGAAGACAAGAGAAGAAGTTTGTA...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TGTACTCTCAGTAGCCCATCTAATGGCATTCATTCCTTAAATGAGCCACTGATGCAGCGATCCATTAGTTaGATTACCATAGGTGTATTA +
Preference number: 5 (lower is better)
Translates to: CTLSSPSNGIHSLNEPLMQRSIS*ITIGVL
Trigger: TAATACACCTATGGTAATCAAACTAATGGATCGCTG...CATCAGTGGCTCATTTAAGGAATGAATGCCATTAGATGGGCTACTGAGAGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCACAGCGATCCATTAGTTaGATTACCATAGGTGTATTA +
Preference number: 5 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNAQRSIS*ITIGVL
Trigger: TAATACACCTATGGTAATCAAACTAATGGATCGCTG...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TTCCATCATTTACATACAGTGACCTCATTTCAAGATAGGGGAATTGATATGTCAATTCCCTGTCAGCCCTaGAATTCGAACCTGTTTGAG +
Preference number: 5 (lower is better)
Translates to: FHHLHTVTSFQDRGIDMSIPCQP*NSNLFE
Trigger: CTCAAACAGGTTCGAATTCAAGGGCTGACAGGGAAT...TGACATATCAATTCCCCTATCTTGAAATGAGGTCACTGTATGTAAATGATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp AGGAGCTTACAGTCTAGTAGTTATACAGACGAGTACACAGGCAATTACAACGCAATGGATAATCTGGCTTaGTTTCTTATGGCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: RSLQSSSYTDEYTGNYNAMDNLA*FLMASE
Trigger: TTCTGAAGCCATAAGAAACAAAGCCAGATTATCCAT...TGCGTTGTAATTGCCTGTGTACTCGTCTGTATAACTACTAGACTGTAAGCTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS CCA 90 bp CGATCCATTAGTTTGATTACCATAGGTGTATTAAAATCCACCAACTaGAATCCAGTAACATTGGCTCCACCATGTATAAACCTCTCAAGA +
Preference number: 5 (lower is better)
Translates to: RSISLITIGVLKSTN*NPVTLAPPCINLSR
Trigger: TCTTGAGAGGTTTATACATGGTGGAGCCAATGTTACTGGATTCCAGTTGGTGGATTTTAATACACCTATGGTAATCAAACTAATGGATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282499.10
ENST00000393125.6
ENST00000393127.6
ENST00000428631.6
ENST00000525187.5
ENST00000527687.1
ENST00000530497.1
CDS-3UTR CAA 90 bp TTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTGGACTACCGTTTTCAACTCAAGAGAAATATCCTaGAATCCCAAGTTTGCAATG +
Preference number: 5 (lower is better)
Translates to: FIMNEVEGYHRSWTTVFNSREIS*NPKFAM
Trigger: CATTGCAAACTTGGGATTCAAGGATATTTCTCTTGA...GTTGAAAACGGTAGTCCAGGACCTATGATATCCCTCCACTTCATTCATTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCTCAAGAGAAATATCCTaGAATCCCAAGTTTGCAATG +
Preference number: 5 (lower is better)
Translates to: MFWRHRLACSRTSTTILSSREIS*NPKFAM
Trigger: CATTGCAAACTTGGGATTCAAGGATATTTCTCTTGA...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTTCAAGAGAAATATCCTaGAATCCCAAGTTTGCAATG +
Preference number: 5 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFSREIS*NPKFAM
Trigger: CATTGCAAACTTGGGATTCAAGGATATTTCTCTTGA...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATACTGTTTAAGATTGCTCTTACAGCATTTCCTCTCCTaGAGATATCAATTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCDLYCLRLLLQHFLS*RYQFSA
Trigger: GGCAGAAAATTGATATCTCAAGGAGAGGAAATGCTG...TAAGAGCAATCTTAAACAGTATAAATCACACACACACACACACACACACACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCATAGCAGCTGTGTCATaGCCAAGAGTTGGTACATCT +
Preference number: 5 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILIAAVS*PRVGTS
Trigger: AGATGTACCAACTCTTGGCAATGACACAGCTGCTAT...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp CTTTCGAGTCTACACCGCAGACTGATGATTGAACCTAAACGTTTTCTTCCTTTTATGGATAATCTGGCTTaGTTTCTTATGGCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: LSSLHRRLMIEPKRFLPFMDNLA*FLMASE
Trigger: TTCTGAAGCCATAAGAAACAAAGCCAGATTATCCAT...AAAAGGAAGAAAACGTTTAGGTTCAATCATCAGTCTGCGGTGTAGACTCGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000530497.1
CDS-3UTR CAA 90 bp ATGTTCTGGAGACACAGGTTAGCATGTTCACGGACTTCTACAACTATTTTATCCAACCTTCTCTATAGGTaGCTAAATTCTGGGTATTCT +
Preference number: 5 (lower is better)
Translates to: MFWRHRLACSRTSTTILSNLLYR*LNSGYS
Trigger: AGAATACCCAGAATTTAGCAACCTATAGAGAAGGTT...GGATAAAATAGTTGTAGAAGTCCGTGAACATGCTAACCTGTGTCTCCAGAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393127.6
CDS TCA 90 bp TTGGTGATAAAAGATTGTGATTTGGTCCTGAAGATAGTCATGGAATaGAAACTCTCAAACCTCACACTCCAAATTAAAAGCTGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: LVIKDCDLVLKIVME*KLSNLTLQIKSWEK
Trigger: CTTCTCCCAGCTTTTAATTTGGAGTGTGAGGTTTGAGAGTTTTCATTCCATGACTATCTTCAGGACCAAATCACAATCTTTTATCACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525032.1
CDS-3UTR CAA 90 bp TATCTACAAGGGATTTCTTTCATAATGAATGAAGTGGAGGGATATCATAGGTCCGACATGCCAACCATTTaGTCCTGCTTTTTCCATAAT +
Preference number: 5 (lower is better)
Translates to: YLQGISFIMNEVEGYHRSDMPTI*SCFFHN
Trigger: ATTATGGAAAAAGCAGGACAAAATGGTTGGCATGTC...GGACCTATGATATCCCTCCACTTCATTCATTATGAAAGAAATCCCTTGTAGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp TTTAAGATTTATTTGTCCAGTCCCTTTAGTAACAAGGATGGAAAGGAGATTCTCTGGAATCCAGTAACATaGGCTCCACCATGTATAAAC +
Preference number: 5 (lower is better)
Translates to: FKIYLSSPFSNKDGKEILWNPVT*APPCIN
Trigger: GTTTATACATGGTGGAGCCAATGTTACTGGATTCCA...GAGAATCTCCTTTCCATCCTTGTTACTAAAGGGACTGGACAAATAAATCTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp TTATATCCAGTGCTCACTCTCAGCCTTCTATATCTAGATATAGGTATCACATATCAGCATTTCCTCTCCTaGAGATATCAATTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: LYPVLTLSLLYLDIGITYQHFLS*RYQFSA
Trigger: GGCAGAAAATTGATATCTCAAGGAGAGGAAATGCTG...ATATGTGATACCTATATCTAGATATAGAAGGCTGAGAGTGAGCACTGGATATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp ACGGCATTAGGTGAGGTCACCCGTTTAGTTTCATTGTGTGGAATAATAGATAAAGCAATACAACTGCTATaGACTGATCATGTTTCAATG +
Preference number: 5 (lower is better)
Translates to: TALGEVTRLVSLCGIIDKAIQLL*TDHVSM
Trigger: CATTGAAACATGATCAGTCAATAGCAGTTGTATTGC...TTTATCTATTATTCCACACAATGAAACTAAACGGGTGACCTCACCTAATGCCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS-3UTR CAA 90 bp TTATATCCAGTGCTCACTCTCAGCCTTCTATATCTAGATATAGGTATCACATATTTTTTCCATAATAGCTaGGAGTATCGAGTATCCCCT +
Preference number: 5 (lower is better)
Translates to: LYPVLTLSLLYLDIGITYFFHNS*EYRVSP
Trigger: AGGGGATACTCGATACTCCAAGCTATTATGGAAAAA...ATATGTGATACCTATATCTAGATATAGAAGGCTGAGAGTGAGCACTGGATATAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp TTCCATCATTTACATACAGTGACCTCATTTCAAGATAGGGGAATTGATATGTCAGACATGCCAACCATTTaGTCCTGCTTTTTCCATAAT +
Preference number: 5 (lower is better)
Translates to: FHHLHTVTSFQDRGIDMSDMPTI*SCFFHN
Trigger: ATTATGGAAAAAGCAGGACAAAATGGTTGGCATGTC...TGACATATCAATTCCCCTATCTTGAAATGAGGTCACTGTATGTAAATGATGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp TATCTACAAGGGATTTCTTTCATAATGAATGAAGTGGAGGGATATCATAGGTCCTACAAACTTCTTCTCTaGTCTTCTGTCAAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: YLQGISFIMNEVEGYHRSYKLLL*SSVKFF
Trigger: GAAGAACTTGACAGAAGACAAGAGAAGAAGTTTGTA...GGACCTATGATATCCCTCCACTTCATTCATTATGAAAGAAATCCCTTGTAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp ATCTACCCTTGGAAATGGAGTGATATAATTCCATCATTTACATACAGTGACCTCTCAAGAGAAATATCCTaGAATCCCAAGTTTGCAATG +
Preference number: 5 (lower is better)
Translates to: IYPWKWSDIIPSFTYSDLSREIS*NPKFAM
Trigger: CATTGCAAACTTGGGATTCAAGGATATTTCTCTTGA...GAGGTCACTGTATGTAAATGATGGAATTATATCACTCCATTTCCAAGGGTAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp TTCCATCATTTACATACAGTGACCTCATTTCAAGATAGGGGAATTGATATGTCATGTCATTGCCAAGAGTaGGTACATCTTGAATCAAGA +
Preference number: 5 (lower is better)
Translates to: FHHLHTVTSFQDRGIDMSCHCQE*VHLESR
Trigger: TCTTGATTCAAGATGTACCAACTCTTGGCAATGACA...TGACATATCAATTCCCCTATCTTGAAATGAGGTCACTGTATGTAAATGATGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp TTATATCCAGTGCTCACTCTCAGCCTTCTATATCTAGATATAGGTATCACATATTGTCATTGCCAAGAGTaGGTACATCTTGAATCAAGA +
Preference number: 5 (lower is better)
Translates to: LYPVLTLSLLYLDIGITYCHCQE*VHLESR
Trigger: TCTTGATTCAAGATGTACCAACTCTTGGCAATGACA...ATATGTGATACCTATATCTAGATATAGAAGGCTGAGAGTGAGCACTGGATATAA
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS-3UTR CAA 90 bp TTATATCCAGTGCTCACTCTCAGCCTTCTATATCTAGATATAGGTATCACATATCAGCGATCCATTAGTTaGATTACCATAGGTGTATTA +
Preference number: 5 (lower is better)
Translates to: LYPVLTLSLLYLDIGITYQRSIS*ITIGVL
Trigger: TAATACACCTATGGTAATCAAACTAATGGATCGCTG...ATATGTGATACCTATATCTAGATATAGAAGGCTGAGAGTGAGCACTGGATATAA
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393125.6
ENST00000428631.6
CDS CCA 72 bp GAGCGCCCCAGTCTCCCGGACGCTCCGGAGCCAGTCTaGTGTCAGGTTTTCCCTTCTGACCACTCGCTGACT +
Preference number: 6 (lower is better)
Translates to: ERPSLPDAPEPV*CQVFPSDHSLT
Trigger: AGTCAGCGAGTGGTCAGAAGGGAAAACCTGACACCAGACTGGCTCCGGAGCGTCCGGGAGACTGGGGCGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000282499.10
ENST00000393125.6
ENST00000393127.6
ENST00000525921.1
ENST00000527669.1
ENST00000531986.5
CDS CCA 72 bp CAGAGGCTGTTAAAGATGCCAAACTCATTGGGAGGCTaGTCGCTGGGTCCTTCCTTTCCGTCCTCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: QRLLKMPNSLGG*SLGPSFPSSGS
Trigger: AGAGCCAGAGGACGGAAAGGAAGGACCCAGCGACCAGCCTCCCAATGAGTTTGGCATCTTTAACAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282499.10
ENST00000393127.6
ENST00000525187.5
ENST00000530497.1
CDS GCA 72 bp AGCCGCCAACCAGAATGTAGAAGACGCCTGCTACATTaGTCAGGCTCAAGGCACTCGTCTTGTCCTTGGAGT +
Preference number: 6 (lower is better)
Translates to: SRQPECRRRLLH*SGSRHSSCPWS
Trigger: ACTCCAAGGACAAGACGAGTGCCTTGAGCCTGAGCAATGTAGCAGGCGTCTTCTACATTCTGGTTGGCGGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393127.6
ENST00000525187.5
ENST00000533094.1
CDS CCA 72 bp GCTCCTCGTAACGAAGGTCTTAGTTGCAGCACAAACTaGCTCTCCCCCTCAGTAGGGAAACTTGGTGTGATG +
Preference number: 6 (lower is better)
Translates to: APRNEGLSCSTN*LSPSVGKLGVM
Trigger: CATCACACCAAGTTTCCCTACTGAGGGGGAGAGCCAGTTTGTGCTGCAACTAAGACCTTCGTTACGAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000282499.10
ENST00000393125.6
ENST00000393127.6
ENST00000428631.6
ENST00000525032.1
ENST00000525187.5
ENST00000530497.1
ENST00000531011.5
CDS GCA 72 bp AAACTCAAGAGTGCTCCTCGTAACGAAGGTCTTAGTTaGAGCACAAACTGGCTCTCCCCCTCAGTAGGGAAA +
Preference number: 6 (lower is better)
Translates to: KLKSAPRNEGLS*STNWLSPSVGK
Trigger: TTTCCCTACTGAGGGGGAGAGCCAGTTTGTGCTGCAACTAAGACCTTCGTTACGAGGAGCACTCTTGAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000282499.10
ENST00000393125.6
ENST00000393127.6
ENST00000428631.6
ENST00000525032.1
ENST00000525187.5
ENST00000530497.1
ENST00000531011.5
CDS CAA 90 bp ACGCGGCCATTCTCTCCCACACTCCCAGTGATGGATAATCTGGCTTaGTTTCTTATGGCTTCAGAAAAGGTCAGCTTCATTCTCTTCGCT +
Preference number: 6 (lower is better)
Translates to: TRPFSPTLPVMDNLA*FLMASEKVSFILFA
Trigger: AGCGAAGAGAATGAAGCTGACCTTTTCTGAAGCCATAAGAAACAAAGCCAGATTATCCATCACTGGGAGTGTGGGAGAGAATGGCCGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282499.10
ENST00000530497.1
CDS TCA 72 bp ACAGCAAAACTGTTGGCTGTCTCAATGTTGTCCACATaGGGTACCAAATTAAAAGGAGCTTCCGACGCATTG +
Preference number: 6 (lower is better)
Translates to: TAKLLAVSMLST*GTKLKGASDAL
Trigger: CAATGCGTCGGAAGCTCCTTTTAATTTGGTACCTCATGTGGACAACATTGAGACAGCCAACAGTTTTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000282499.10
ENST00000393125.6
ENST00000393127.6
ENST00000428631.6
ENST00000525032.1
ENST00000525187.5
ENST00000525921.1
ENST00000527177.5
ENST00000527669.1
ENST00000530497.1
ENST00000531011.5
ENST00000531986.5
CDS CCA 72 bp ACTGGGAACAGAAGGCGTTTGTTACAGCAAAACTGTTaGCTGTCTCAATGTTGTCCACATGAGGTACCAAAT +
Preference number: 6 (lower is better)
Translates to: TGNRRRLLQQNC*LSQCCPHEVPN
Trigger: ATTTGGTACCTCATGTGGACAACATTGAGACAGCCAACAGTTTTGCTGTAACAAACGCCTTCTGTTCCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000282499.10
ENST00000393125.6
ENST00000393127.6
ENST00000428631.6
ENST00000525032.1
ENST00000525187.5
ENST00000530497.1
ENST00000531011.5
CDS GCA 72 bp CACACATATAGCGCTGACATGCCAACCATTTTGTCCTaGTTTTTCCATAATAGCTTGGAGTATCGAGTATCC +
Preference number: 6 (lower is better)
Translates to: HTYSADMPTILS*FFHNSLEYRVS
Trigger: GGATACTCGATACTCCAAGCTATTATGGAAAAAGCAGGACAAAATGGTTGGCATGTCAGCGCTATATGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000282499.10
ENST00000393125.6
ENST00000393127.6
ENST00000428631.6
ENST00000525032.1
ENST00000525187.5
ENST00000530497.1
CDS TCA 72 bp TACTTTGGAGGAGTCTCAGATCCTGGATACTCTCTCTaGTCTAGTTTCTTCCAGCGATCCATTAGTTTGATT +
Preference number: 6 (lower is better)
Translates to: YFGGVSDPGYSL*SSFFQRSISLI
Trigger: AATCAAACTAATGGATCGCTGGAAGAAACTAGATCAGAGAGAGTATCCAGGATCTGAGACTCCTCCAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282499.10
ENST00000393125.6
ENST00000393127.6
ENST00000428631.6
ENST00000525187.5
ENST00000527687.1
ENST00000530497.1
CDS GCA 72 bp CACACATATAGCGCTGACATGCCAACCATTTTGTCCTaGTTTTTCCATAATAGCTTGGAGTATCGAGTATCA +
Preference number: 6 (lower is better)
Translates to: HTYSADMPTILS*FFHNSLEYRVS
Trigger: TGATACTCGATACTCCAAGCTATTATGGAAAAAGCAGGACAAAATGGTTGGCATGTCAGCGCTATATGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527687.1
CDS CCA 72 bp TGTTTTACTTACAGGCGTTTGTTACAGCAAAACTGTTaGCTGTCTCAATGTTGTCCACATGAGGTACCAAAT +
Preference number: 6 (lower is better)
Translates to: CFTYRRLLQQNC*LSQCCPHEVPN
Trigger: ATTTGGTACCTCATGTGGACAACATTGAGACAGCCAACAGTTTTGCTGTAACAAACGCCTGTAAGTAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527669.1
CDS CCA 72 bp AGTTTGATTACCATAGGTGTATTAAAATCCACCAACTaGAATCCAGTAACATTGGCTCCACCATGTATAAAC +
Preference number: 6 (lower is better)
Translates to: SLITIGVLKSTN*NPVTLAPPCIN
Trigger: GTTTATACATGGTGGAGCCAATGTTACTGGATTCCAGTTGGTGGATTTTAATACACCTATGGTAATCAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282499.10
ENST00000393125.6
ENST00000393127.6
ENST00000428631.6
ENST00000525187.5
ENST00000527687.1
ENST00000530497.1