RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRIA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000125675

Ensembl transcript IDs: ENST00000477389.1, ENST00000479118.1, ENST00000611689.4, ENST00000616590.4, ENST00000620443.2, ENST00000620581.4, ENST00000622768.5

Found 539 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGCAACAGCTAGTAGGACAGACCTAGCAAGAGTAAAGTCAGACTaGGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTC +
Preference number: 1 (lower is better)
Translates to: QATASRTDLARVKSD*ELWSEPAVPPCNAV
Trigger: GACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTGACTTTACTCTTGCTAGGTCTGTCCTACTAGCTGTTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR TCA 90 bp TGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTaGAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTG +
Preference number: 1 (lower is better)
Translates to: CCPALQRGPVSVVYT*KAYLAEKAELNTVL
Trigger: CAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR CCA 90 bp ATCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTaGCTCAGGATCCTTGAAGCAGCCACGTTTTCGGTGATTTCCTCT +
Preference number: 1 (lower is better)
Translates to: ISNIRVMPDTKESEI*LRILEAATFSVISS
Trigger: AGAGGAAATCACCGAAAACGTGGCTGCTTCAAGGATCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR TCA 90 bp ATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAATaGATGCGAGCTCCTAGTTTTTGCAGTCTGGAAACTTCCCAATGC +
Preference number: 1 (lower is better)
Translates to: ICSESTKHLRVTLGK*MRAPSFCSLETSQC
Trigger: GCATTGGGAAGTTTCCAGACTGCAAAAACTAGGAGCTCGCATTCATTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR CCA 90 bp AGAGTGCACAGAACATCACCACCAACAGGAAATACCAAAAACATCTaGTCAGCAGATCCTAGAAGAAATGCCAGTCCGTCTTCCCAAACA +
Preference number: 1 (lower is better)
Translates to: RVHRTSPPTGNTKNI*SADPRRNASPSSQT
Trigger: TGTTTGGGAAGACGGACTGGCATTTCTTCTAGGATCTGCTGACCAGATGTTTTTGGTATTTCCTGTTGGTGGTGATGTTCTGTGCACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR GCA 90 bp CAGAGGGTAGTTTCTTCTGTCTCTAAAATGGGTTTGGGTTCAACCTaGAACTTTACAGCTTCACACACCCAGGCTGAACTTCTTTCTTTC +
Preference number: 1 (lower is better)
Translates to: QRVVSSVSKMGLGST*NFTASHTQAELLSF
Trigger: GAAAGAAAGAAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGGTTGAACCCAAACCCATTTTAGAGACAGAAGAAACTACCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
3UTR CCA 90 bp GCCGAGCTAAACACAGTGTTGTTTCTGAGATATTCTAAACACATCTaGGAGTATAGGCAGCATTTCCCTCACCTCAATGCTAGATACTCA +
Preference number: 1 (lower is better)
Translates to: AELNTVLFLRYSKHI*EYRQHFPHLNARYS
Trigger: TGAGTATCTAGCATTGAGGTGAGGGAAATGCTGCCTATACTCCCAGATGTGTTTAGAATATCTCAGAAACAACACTGTGTTTAGCTCGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR TCA 90 bp TTTCTGGAAACATTTCGTTGGAACGATACTTCTTCCTTTCTTTTCTaGAGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGG +
Preference number: 1 (lower is better)
Translates to: FLETFRWNDTSSFLF*RQEQICSESTKHLR
Trigger: CCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCTTCAGAAAAGAAAGGAAGAAGTATCGTTCCAACGAAATGTTTCCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR GCA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCACCTGCTGTCCCGCCTTaGAACGCGGTCCTGTCTCCG +
Preference number: 2 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVAPAVPP*NAVLSP
Trigger: CGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGG...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR GCA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTGCAATATTCGTGTCATaGCCGACACCAAGGAGAGTG +
Preference number: 2 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLAIFVS*PTPRRV
Trigger: CACTCTCCTTGGTGTCGGGCATGACACGAATATTGC...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR TCA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTAACAGATCTGTGAGCTaGAATTCCAGGCTCCTTGGA +
Preference number: 2 (lower is better)
Translates to: QTENCGLNLLSRLATRSCNRSVS*NSRLLG
Trigger: TCCAAGGAGCCTGGAATTTCAGCTCACAGATCTGTT...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR CAA 90 bp CTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTaGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTT +
Preference number: 2 (lower is better)
Translates to: LLSRLATRSCLRGVH*KGILSRESRAKHSV
Trigger: AACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR TCA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGCTGGCTCAGGATCCTTaGAGCAGCCACGTTTTCGGT +
Preference number: 2 (lower is better)
Translates to: GRYAVSYLIAHGAVERSELAQDP*SSHVFG
Trigger: ACCGAAAACGTGGCTGCTTCAAGGATCCTGAGCCAG...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR TCA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTAGAAAAACAGATCTGTaGGCTGAAATTCCAGGCTCC +
Preference number: 2 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLRKTDL*AEIPGS
Trigger: GGAGCCTGGAATTTCAGCTCACAGATCTGTTTTTCT...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CCA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACTCAGGCTCAGAGCGCTaGTCTTGTCCTTACTCCCGG +
Preference number: 2 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHSGSER*SCPYSR
Trigger: CCGGGAGTAAGGACAAGACCAGCGCTCTGAGCCTGA...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
3UTR-3UTR CCA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTAAGGAGAGTGAAATCTaGCTCAGGATCCTTGAAGCA +
Preference number: 2 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLKESEI*LRILEA
Trigger: TGCTTCAAGGATCCTGAGCCAGATTTCACTCTCCTT...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR TCA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGCAGCCACGTTTTCGGTaGTTTCCTCTCATCACATGC +
Preference number: 2 (lower is better)
Translates to: QWSDLRESIERLLQARIWQPRFR*FPLITC
Trigger: GCATGTGATGAGAGGAAATCACCGAAAACGTGGCTG...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR GCA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGGCAATATTCGTGTCATaGCCGACACCAAGGAGAGTG +
Preference number: 2 (lower is better)
Translates to: QWSDLRESIERLLQARIWAIFVS*PTPRRV
Trigger: CACTCTCCTTGGTGTCGGGCATGACACGAATATTGC...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CCA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGAAATTCCAGGCTCCTTaGAAAGCCCCGGGATCCATT +
Preference number: 2 (lower is better)
Translates to: QWSDLRESIERLLQARIWKFQAP*KAPGSI
Trigger: AATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTT...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR TCA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACCAGCCACGTTTTCGGTaGTTTCCTCTCATCACATGC +
Preference number: 2 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHQPRFR*FPLITC
Trigger: GCATGTGATGAGAGGAAATCACCGAAAACGTGGCTG...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR TCA 90 bp CCAATGCACGTTATCGATGAGAGCAAACTACTGAACTACAGGAAGCATACGTCGCTGGCTCAGGATCCTTaGAGCAGCCACGTTTTCGGT +
Preference number: 2 (lower is better)
Translates to: PMHVIDESKLLNYRKHTSLAQDP*SSHVFG
Trigger: ACCGAAAACGTGGCTGCTTCAAGGATCCTGAGCCAG...CGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR TCA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTATCAGTTTTTCCTATTaGAAGGTCATTGCACCATCA +
Preference number: 2 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLISFSY*KVIAPS
Trigger: TGATGGTGCAATGACCTTTCAATAGGAAAAACTGAT...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR GCA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTGGTGTTTATATACTCTaGAGTGGTATCAAAGAATGG +
Preference number: 2 (lower is better)
Translates to: QTENCGLNLLSRLATRSCGVYIL*SGIKEW
Trigger: CCATTCTTTGATACCACTGCAGAGTATATAAACACC...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR CAA 90 bp TCGGACTGTTCTGATGATGCCAACGGCAGGTATGCAGTTAGTTACTaGATAGCCCATGGAGCAGTGGAGCGATCTGAGAGAGTCAATAGA +
Preference number: 2 (lower is better)
Translates to: SDCSDDANGRYAVSY*IAHGAVERSERVNR
Trigger: TCTATTGACTCTCTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCCGTTGGCATCATCAGAACAGTCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CCA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGGCGGTCCTGTCTCCGTaGTGTACACTTGAAAGGCAT +
Preference number: 2 (lower is better)
Translates to: RQEQICSESTKHLRVTLGAVLSP*CTLERH
Trigger: ATGCCTTTCAAGTGTACACCACGGAGACAGGACCGC...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR TCA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGCGACACCAAGGAGAGTaGAATCTGGCTCAGGATCCT +
Preference number: 2 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPRHQGE*NLAQDP
Trigger: AGGATCCTGAGCCAGATTTCACTCTCCTTGGTGTCG...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CCA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAATTCCAGGCTCCTTaGAAAGCCCCGGGATCCATT +
Preference number: 2 (lower is better)
Translates to: RQEQICSESTKHLRVTLGKFQAP*KAPGSI
Trigger: AATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTT...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR GCA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGATTTCAATGATGGTTTaGATTGTCGCGAGTCTCAGA +
Preference number: 2 (lower is better)
Translates to: GRYAVSYLIAHGAVERSEISMMV*IVASLR
Trigger: TCTGAGACTCGCGACAATGCAAACCATCATTGAAAT...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR GCA 90 bp CCAATGCACGTTATCGATGAGAGCAAACTACTGAACTACAGGAAGCATACGTCGCTAGAAAAGGACACATaGAGTCCGATGGAGAGCCAT +
Preference number: 2 (lower is better)
Translates to: PMHVIDESKLLNYRKHTSLEKDT*SPMESH
Trigger: ATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAG...CGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR GCA 90 bp GGGATCCATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTATTGAAAGGTCATTaGACCATCAGCAATATTCGT +
Preference number: 2 (lower is better)
Translates to: GIHFRKAPRGILIVPRPLLLKGH*TISNIR
Trigger: ACGAATATTGCTGATGGTGCAATGACCTTTCAATAG...CAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATGGATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR GCA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAACGCATACTGGAATCTTaGATGTCCATTTTTGTTGGT +
Preference number: 2 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQRILES*MSIFVG
Trigger: ACCAACAAAAATGGACATGCAAGATTCCAGTATGCG...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CCA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGTATTCTAAACACATCTaGGAGTATAGGCAGCATTTC +
Preference number: 2 (lower is better)
Translates to: QWSDLRESIERLLQARIWYSKHI*EYRQHF
Trigger: GAAATGCTGCCTATACTCCCAGATGTGTTTAGAATA...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR TCA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACATCAGTTTTTCCTATTaGAAGGTCATTGCACCATCA +
Preference number: 2 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHISFSY*KVIAPS
Trigger: TGATGGTGCAATGACCTTTCAATAGGAAAAACTGAT...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR GCA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAAGGTGTTTATATACTCTaGAGTGGTATCAAAGAATGG +
Preference number: 2 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQGVYIL*SGIKEW
Trigger: CCATTCTTTGATACCACTGCAGAGTATATAAACACC...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR GCA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGATTTCAATGATGGTTTaGATTGTCGCGAGTCTCAGA +
Preference number: 2 (lower is better)
Translates to: RQEQICSESTKHLRVTLGISMMV*IVASLR
Trigger: TCTGAGACTCGCGACAATGCAAACCATCATTGAAAT...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR CAA 90 bp TTATTTTATCTCCAGAGGGTAGTTTCTTCTGTCTCTAAAATGGGTTaGGGTTCAACCTGCAACTTTACAGCTTCACACACCCAGGCTGAA +
Preference number: 2 (lower is better)
Translates to: LFYLQRVVSSVSKMG*GSTCNFTASHTQAE
Trigger: TTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGGTTGAACCCAAACCCATTTTAGAGACAGAAGAAACTACCCTCTGGAGATAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
3UTR-3UTR TCA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGTGTAAATCTCTTCTTTaGGTGGGAAGTTATCAAAGC +
Preference number: 2 (lower is better)
Translates to: RQEQICSESTKHLRVTLGCKSLL*VGSYQS
Trigger: GCTTTGATAACTTCCCACTCAAAGAAGAGATTTACA...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR TCA 90 bp CCAATGCACGTTATCGATGAGAGCAAACTACTGAACTACAGGAAGCATACGTCGGATACTCAGCTCTATTaGCTTAAAATGCACACTGAA +
Preference number: 2 (lower is better)
Translates to: PMHVIDESKLLNYRKHTSDTQLY*LKMHTE
Trigger: TTCAGTGTGCATTTTAAGTCAATAGAGCTGAGTATC...CGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR TCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAAAATGCACGTTATCGATaGGAGCAAACTACTGAACTA +
Preference number: 2 (lower is better)
Translates to: QEQICSESTKHLRVTLGKNARYR*EQTTEL
Trigger: TAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATT...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR GCA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGCGCATACTGGAATCTTaGATGTCCATTTTTGTTGGT +
Preference number: 2 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPRILES*MSIFVG
Trigger: ACCAACAAAAATGGACATGCAAGATTCCAGTATGCG...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CCA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGGAGGTAATTAGTGAGTaGAGACTATTTCTTCGGACT +
Preference number: 2 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPEVISE*RLFLRT
Trigger: AGTCCGAAGAAATAGTCTCCACTCACTAATTACCTC...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR TCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAAGATACTCAGCTCTATTaGCTTAAAATGCACACTGAA +
Preference number: 2 (lower is better)
Translates to: QEQICSESTKHLRVTLGKDTQLY*LKMHTE
Trigger: TTCAGTGTGCATTTTAAGTCAATAGAGCTGAGTATC...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR GCA 90 bp TTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGAGGGTAGTTGGTTTGGGTTCAACCTaGAACTTTACAGCTTCACAC +
Preference number: 2 (lower is better)
Translates to: LILSHLSFIFLFYLQRVVGLGST*NFTASH
Trigger: GTGTGAAGCTGTAAAGTTGCAGGTTGAACCCAAACC...AACTACCCTCTGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
3UTR-3UTR GCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAACTATTGAAAGGTCATTaGACCATCAGCAATATTCGT +
Preference number: 2 (lower is better)
Translates to: QEQICSESTKHLRVTLGKLLKGH*TISNIR
Trigger: ACGAATATTGCTGATGGTGCAATGACCTTTCAATAG...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAATATTCTAAACACATCTaGGAGTATAGGCAGCATTTC +
Preference number: 2 (lower is better)
Translates to: QEQICSESTKHLRVTLGKYSKHI*EYRQHF
Trigger: GAAATGCTGCCTATACTCCCAGATGTGTTTAGAATA...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR TCA 90 bp GTACACTTGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTGTTTGTAAATCTCTTCTTTaGGTGGGAAGTTATCAAAGC +
Preference number: 2 (lower is better)
Translates to: VHLKGILSRESRAKHSVVCKSLL*VGSYQS
Trigger: GCTTTGATAACTTCCCACTCAAAGAAGAGATTTACA...AACAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CCA 90 bp AACTTTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGAGGGTCTTCTGTCTCTAAAATaGGTTTGGGTTCAACCTGCA +
Preference number: 2 (lower is better)
Translates to: NFDPVPSQLHLFILSPEGLLSLK*VWVQPA
Trigger: TGCAGGTTGAACCCAAACCCATTTTAGAGACAGAAG...ACCCTCTGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
3UTR-3UTR CCA 90 bp AACTTTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGAGGGTTCTCTAAAATGGGTTTaGGTTCAACCTGCAACTTTA +
Preference number: 2 (lower is better)
Translates to: NFDPVPSQLHLFILSPEGSLKWV*VQPATL
Trigger: TAAAGTTGCAGGTTGAACCCAAACCCATTTTAGAGA...ACCCTCTGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAAAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
3UTR-3UTR CCA 90 bp TTCATCAACTTTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCATCTCTAAAATGGGTTTaGGTTCAACCTGCAACTTTA +
Preference number: 2 (lower is better)
Translates to: FINFDPVPSQLHLFILSPSLKWV*VQPATL
Trigger: TAAAGTTGCAGGTTGAACCCAAACCCATTTTAGAGA...TGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAAAGTTGATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
3UTR TCA 72 bp CCTAGCAAGAGTAAAGTCAGACTGAGAACTGTGGTCTaGACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTC +
Preference number: 3 (lower is better)
Translates to: PSKSKVRLRTVV*TCCPALQRGPV
Trigger: GACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTGACTTTACTCTTGCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CAA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTGATTTCAATGATGGTTaGCATTGTCGCGAGTCTCAG +
Preference number: 3 (lower is better)
Translates to: QTENCGLNLLSRLATRSCDFNDG*HCRESQ
Trigger: CTGAGACTCGCGACAATGCAAACCATCATTGAAATC...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR TCA 72 bp GCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTaGAAGGCATACTTAGCAGAGAAAGCCGAGCTAAAC +
Preference number: 3 (lower is better)
Translates to: ALQRGPVSVVYT*KAYLAEKAELN
Trigger: GTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR TCA 72 bp GCTAGTAGGACAGACCTAGCAAGAGTAAAGTCAGACTaGGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGC +
Preference number: 3 (lower is better)
Translates to: ASRTDLARVKSD*ELWSEPAVPPC
Trigger: GCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTGACTTTACTCTTGCTAGGTCTGTCCTACTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR CCA 72 bp ATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTaGCTCAGGATCCTTGAAGCAGCCACGTTTTCGGTG +
Preference number: 3 (lower is better)
Translates to: IRVMPDTKESEI*LRILEAATFSV
Trigger: CACCGAAAACGTGGCTGCTTCAAGGATCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CAA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTCTTAGATGGGCCTCTTaGCTGAATTGGAATTTAAAT +
Preference number: 3 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLLRWAS*LNWNLN
Trigger: ATTTAAATTCCAATTCAGCAAAGAGGCCCATCTAAG...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CAA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGATAGTGCCCCGTCCCTaGCTACACACAAAGTCAATT +
Preference number: 3 (lower is better)
Translates to: GRYAVSYLIAHGAVERSEIVPRP*LHTKSI
Trigger: AATTGACTTTGTGTGTAGCAAGGGACGGGGCACTAT...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CAA 90 bp ACTCTCTGTTCCATACACGTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTCTCAGAGCGCTGGTCTaGTCCTTACTCCCGGAGTCC +
Preference number: 3 (lower is better)
Translates to: TLCSIHVVAFSVCSIILSLRALV*SLLPES
Trigger: GGACTCCGGGAGTAAGGACAAGACCAGCGCTCTGAG...ACTCAGAATTATGCTACATACAGAGAAGGCTACAACGTGTATGGAACAGAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
3UTR-3UTR CAA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGGATTTCAATGATGGTTaGCATTGTCGCGAGTCTCAG +
Preference number: 3 (lower is better)
Translates to: GRYAVSYLIAHGAVERSEDFNDG*HCRESQ
Trigger: CTGAGACTCGCGACAATGCAAACCATCATTGAAATC...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CAA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGCCTATTGAAAGGTCATaGCACCATCAGCAATATTCG +
Preference number: 3 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKPIERS*HHQQYS
Trigger: CGAATATTGCTGATGGTGCAATGACCTTTCAATAGG...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CAA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCACCTATTGAAAGGTCATaGCACCATCAGCAATATTCG +
Preference number: 3 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVAPIERS*HHQQYS
Trigger: CGAATATTGCTGATGGTGCAATGACCTTTCAATAGG...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CAA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCACACATTTCAGCAACATaGAAAGGAAATAGAGTGCAC +
Preference number: 3 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVAHISAT*KGNRVH
Trigger: GTGCACTCTATTTCCTTTCAATGTTGCTGAAATGTG...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CAA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACAGCAGGCTTAAAGTTTaGGGTGTTCTTTGTGAGTTT +
Preference number: 3 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHSRLKV*GVLCEF
Trigger: AAACTCACAAAGAACACCCAAAACTTTAAGCCTGCT...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
3UTR-3UTR CAA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGAATCAGTTTTTCCTATaGAAAGGTCATTGCACCATC +
Preference number: 3 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKNQFFL*KGHCTI
Trigger: GATGGTGCAATGACCTTTCAATAGGAAAAACTGATT...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CAA 90 bp GGGATCCATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTTAGATGGGCCTCTTaGCTGAATTGGAATTTAAAT +
Preference number: 3 (lower is better)
Translates to: GIHFRKAPRGILIVPRPLLRWAS*LNWNLN
Trigger: ATTTAAATTCCAATTCAGCAAAGAGGCCCATCTAAG...CAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATGGATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CAA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAAATAGTGCCCCGTCCCTaGCTACACACAAAGTCAATT +
Preference number: 3 (lower is better)
Translates to: QEQICSESTKHLRVTLGKIVPRP*LHTKSI
Trigger: AATTGACTTTGTGTGTAGCAAGGGACGGGGCACTAT...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CAA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAACTCCGTGGTGTACACTaGAAAGGCATACTTAGCAGA +
Preference number: 3 (lower is better)
Translates to: QEQICSESTKHLRVTLGKLRGVH*KGILSR
Trigger: TCTGCTAAGTATGCCTTTCAAGTGTACACCACGGAG...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR TCA 72 bp TTTGCAGTCTGGAAACTTCCCAATGCACGTTATCGATaGGAGCAAACTACTGAACTACAGGAAGCATACGTC +
Preference number: 3 (lower is better)
Translates to: FAVWKLPNARYR*EQTTELQEAYV
Trigger: GACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGGGAAGTTTCCAGACTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR-3UTR CAA 90 bp CCAATGCACGTTATCGATGAGAGCAAACTACTGAACTACAGGAAGCATACGTCGCACATTTCAGCAACATaGAAAGGAAATAGAGTGCAC +
Preference number: 3 (lower is better)
Translates to: PMHVIDESKLLNYRKHTSHISAT*KGNRVH
Trigger: GTGCACTCTATTTCCTTTCAATGTTGCTGAAATGTG...CGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR TCA 72 bp ACTTCCCAATGCACGTTATCGATGAGAGCAAACTACTaGACTACAGGAAGCATACGTCGTTATATAGGAGGT +
Preference number: 3 (lower is better)
Translates to: TSQCTLSMRANY*TTGSIRRYIGG
Trigger: ACCTCCTATATAACGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR TCA 72 bp CAAAGTCAATTTCGAAAGCTCTGTAAATCTCTTCTTTaGGTGGGAAGTTATCAAAGCATTTTCACAAAACCA +
Preference number: 3 (lower is better)
Translates to: QSQFRKLCKSLL*VGSYQSIFTKP
Trigger: TGGTTTTGTGAAAATGCTTTGATAACTTCCCACTCAAAGAAGAGATTTACAGAGCTTTCGAAATTGACTTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR TCA 72 bp AAATGTATTAAAACTTTGTACAATACCTCATGGCAATaGGGCTCTGTAGTTTATGCCCACACATGCAAATTA +
Preference number: 3 (lower is better)
Translates to: KCIKTLYNTSWQ*GSVVYAHTCKL
Trigger: TAATTTGCATGTGTGGGCATAAACTACAGAGCCTCATTGCCATGAGGTATTGTACAAAGTTTTAATACATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTTCAGGCTCAGAGCGCTaGTCTTGTCCTTACTCCCGG +
Preference number: 4 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLSGSER*SCPYSR
Trigger: CCGGGAGTAAGGACAAGACCAGCGCTCTGAGCCTGA...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620443.2
CDS-3UTR CCA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTACACATGCAGTCCGATaGAGAGCCATGGGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: QTENCGLNLLSRLATRSCTHAVR*RAMGGS
Trigger: GCTACCGCCCATGGCTCTCCATCGGACTGCATGTGT...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTAGCGCCCTTCAAGGCTaGGCGCATCTGGATGACAAA +
Preference number: 4 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLSALQG*AHLDDK
Trigger: TTTGTCATCCAGATGCGCCCAGCCTTGAAGGGCGCT...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTAGGCGAACTTTCCCTTaGACTTTCGCACTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: QTENCGLNLLSRLATRSCRRTFP*TFALGP
Trigger: TGGCCCGAGTGCGAAAGTCCAAGGGAAAGTTCGCCT...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTCGACACCAAGGAGAGTaGAATCTGGCTCAGGATCCT +
Preference number: 4 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLRHQGE*NLAQDP
Trigger: AGGATCCTGAGCCAGATTTCACTCTCCTTGGTGTCG...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTTGCCCCATTTTCTTCTaGCTGGCCATGCTACGCCTA +
Preference number: 4 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLCPIFF*LAMLRL
Trigger: TAGGCGTAGCATGGCCAGGCAGAAGAAAATGGGGCA...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAACCTGCTGTCCCGCCTTaGAACGCGGTCCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQPAVPP*NAVLSP
Trigger: CGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGG...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTCAGCCACGTTTTCGGTaGTTTCCTCTCATCACATGC +
Preference number: 4 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLQPRFR*FPLITC
Trigger: GCATGTGATGAGAGGAAATCACCGAAAACGTGGCTG...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTAAAGTCCACCTATGCTaGTGGTGTTGGGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: QTENCGLNLLSRLATRSCKVHLC*WCWGIL
Trigger: GAGGATTCCCCAACACCATCAGCATAGGTGGACTTT...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTACCCCTCTCGAGAACTaGGAGCAGAAAGCATTTGTC +
Preference number: 4 (lower is better)
Translates to: QTENCGLNLLSRLATRSCTPLEN*EQKAFV
Trigger: GACAAATGCTTTCTGCTCCCAGTTCTCGAGAGGGGT...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTAAATTCCAGGCTCCTTaGAAAGCCCCGGGATCCATT +
Preference number: 4 (lower is better)
Translates to: QTENCGLNLLSRLATRSCKFQAP*KAPGSI
Trigger: AATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTT...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGTCCGATGGAGAGCCATaGGCGGTAGCAGGCAACAGC +
Preference number: 4 (lower is better)
Translates to: GRYAVSYLIAHGAVERSESDGEP*AVAGNS
Trigger: GCTGTTGCCTGCTACCGCCCATGGCTCTCCATCGGA...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGTCCGATGGAGAGCCATaGGCGGTAGCAGGCAACAGC +
Preference number: 4 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKSDGEP*AVAGNS
Trigger: GCTGTTGCCTGCTACCGCCCATGGCTCTCCATCGGA...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTTATGGTCCGATTCTCTaGGGATGCACTGTCATTGCT +
Preference number: 4 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLYGPIL*GCTVIA
Trigger: AGCAATGACAGTGCATCCTCAGAGAATCGGACCATA...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGCTGAGAACTGTGGTCTaGACCTGCTGTCCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: QWSDLRESIERLLQARIWLRTVV*TCCPAL
Trigger: CAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAG...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCACTGAGAACTGTGGTCTaGACCTGCTGTCCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVALRTVV*TCCPAL
Trigger: CAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAG...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTGTAGCGGAAAGCTTCTaGTATGACCAGTATTGCGTC +
Preference number: 4 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLVAESF*YDQYCV
Trigger: GACGCAATACTGGTCATAGCAGAAGCTTTCCGCTAC...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGACACATGCAGTCCGATaGAGAGCCATGGGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: QWSDLRESIERLLQARIWTHAVR*RAMGGS
Trigger: GCTACCGCCCATGGCTCTCCATCGGACTGCATGTGT...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp TCCCTCCATGATGCTCACTCAGTTGAGAACTCAAGAAGGGAGGAGGTAGTGCTGGGAAGGCGGGTTCATTaGCTGCAAGCTGGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: SLHDAHSVENSRREEVVLGRRVH*LQAGFA
Trigger: GGCAAACCCAGCTTGCAGCCAATGAACCCGCCTTCC...CAGCACTACCTCCTCCCTTCTTGAGTTCTCAACTGAGTGAGCATCATGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616590.4
CDS-3UTR TCA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGCTGGCTCAGGATCCTTaGAGCAGCCACGTTTTCGGT +
Preference number: 4 (lower is better)
Translates to: QWSDLRESIERLLQARIWLAQDP*SSHVFG
Trigger: ACCGAAAACGTGGCTGCTTCAAGGATCCTGAGCCAG...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp GGGATCCATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCGCCTAAAACGAAGCTaGCAAGAGCATGGGCGCAAC +
Preference number: 4 (lower is better)
Translates to: GIHFRKAPRGILIVPRPLRLKRS*QEHGRN
Trigger: GTTGCGCCCATGCTCTTGTCAGCTTCGTTTTAGGCG...CAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATGGATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTATGTTGGCTCCCCCATaGATGACTCTTTCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLMLAPP*MTLSSK
Trigger: TTTACTGGAAAGAGTCATGCATGGGGGAGCCAACAT...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGAGCGCCCTTCAAGGCTaGGCGCATCTGGATGACAAA +
Preference number: 4 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKSALQG*AHLDDK
Trigger: TTTGTCATCCAGATGCGCCCAGCCTTGAAGGGCGCT...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCAAGGCGAACTTTCCCTTaGACTTTCGCACTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVARRTFP*TFALGP
Trigger: TGGCCCGAGTGCGAAAGTCCAAGGGAAAGTTCGCCT...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGTCAGGCTCAGAGCGCTaGTCTTGTCCTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKSGSER*SCPWSH
Trigger: GTGACTCCAAGGACAAGACCAGCGCTCTGAGCCTGA...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622768.5
3UTR CAA 72 bp CGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTaGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAA +
Preference number: 4 (lower is better)
Translates to: RLATRSCLRGVH*KGILSRESRAK
Trigger: TTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTATGCACTGTCATTGCTaGTTTGCTGATCTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QTENCGLNLLSRLATRSCMHCHC*FADLRK
Trigger: CTTTCTCAGATCAGCAAATCAGCAATGACAGTGCAT...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTGGAAAAGAACTACGCTaGCTCCAATGTAAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: QTENCGLNLLSRLATRSCGKELR*LQCKQR
Trigger: TCTTTGCTTACATTGGAGTCAGCGTAGTTCTTTTCC...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTATGAGAGCAAACTACTaGACTACAGGAAGCATACGT +
Preference number: 4 (lower is better)
Translates to: QTENCGLNLLSRLATRSCMRANY*TTGSIR
Trigger: ACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCAT...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTATGAGAGCAAACTACTaGACTACAGGAAGCATACGT +
Preference number: 4 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLMRANY*TTGSIR
Trigger: ACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCAT...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp TCCCTCCATGATGCTCACTCAGTTGAGAACTCAAGAAGGGAGGAGGTAGTGCTGAAGCGGAAAGCGCTGTaGTCCTGCACTGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SLHDAHSVENSRREEVVLKRKAL*SCTVFL
Trigger: GAGAAACACAGTGCAGGAGCACAGCGCTTTCCGCTT...CAGCACTACCTCCTCCCTTCTTGAGTTCTCAACTGAGTGAGCATCATGGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR GCA 90 bp ATGGGTTTGGGTTCAACCTGCAACTTTACAGCTTCACACACCCAGGCTGAACTTGCCCGGAGCACGCTTTaGCCCATTTTCTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: MGLGSTCNFTASHTQAELARSTL*PIFFCL
Trigger: CAGGCAGAAGAAAATGGGGCAAAGCGTGCTCCGGGC...AAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGGTTGAACCCAAACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR GCA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGGCCCGGAGCACGCTTTaGCCCATTTTCTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRARSTL*PIFFCL
Trigger: CAGGCAGAAGAAAATGGGGCAAAGCGTGCTCCGGGC...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTAGGCTCTGTAGTTTATaGCCACACATGCAAATTACG +
Preference number: 4 (lower is better)
Translates to: QTENCGLNLLSRLATRSCRLCSL*PHMQIT
Trigger: CGTAATTTGCATGTGTGGGCATAAACTACAGAGCCT...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCAGGAAGGGCTTCTCGGTaGTGTTCTGGTTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVAGRASR*CSGWCC
Trigger: ACAACACCAACCAGAACACCACCGAGAAGCCCTTCC...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp GTACACTTGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTGTTCGCTGGTCTTGTCCTTaGAGTCACCGCCCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VHLKGILSRESRAKHSVVRWSCP*SHRPRC
Trigger: GCAGCGGGGGCGGTGACTCCAAGGACAAGACCAGCG...AACAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622768.5
CDS-3UTR TCA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCACAGCCACGTTTTCGGTaGTTTCCTCTCATCACATGC +
Preference number: 4 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVAQPRFR*FPLITC
Trigger: GCATGTGATGAGAGGAAATCACCGAAAACGTGGCTG...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CCTGCAACTTTACAGCTTCACACACCCAGGCTGAACTTCTTTCTTTCTTCTCCCCGCCTAAAACGAAGCTaGCAAGAGCATGGGCGCAAC +
Preference number: 4 (lower is better)
Translates to: PATLQLHTPRLNFFLSSPRLKRS*QEHGRN
Trigger: GTTGCGCCCATGCTCTTGTCAGCTTCGTTTTAGGCG...GGGAGAAGAAAGAAAGAAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611689.4
CDS-3UTR TCA 90 bp TCCCTCCATGATGCTCACTCAGTTGAGAACTCAAGAAGGGAGGAGGTAGTGCTGTCCAATTGTTTTCCCTaGTGCTTCCTGGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SLHDAHSVENSRREEVVLSNCFP*CFLAKA
Trigger: TGCCTTGGCCAGGAAGCATCAGGGAAAACAATTGGA...CAGCACTACCTCCTCCCTTCTTGAGTTCTCAACTGAGTGAGCATCATGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR TCA 90 bp TTTCTTTCTTCTCCCTCCATGATGCTCACTCAGTTGAGAACTCAAGAAGGGAGGAGGTGCAGCAGCCCATaGTCTTTGCAGCACGGCAGA +
Preference number: 4 (lower is better)
Translates to: FLSSPSMMLTQLRTQEGRRCSSP*SLQHGR
Trigger: TCTGCCGTGCTGCAAAGATCATGGGCTGCTGCACCT...CCTCCCTTCTTGAGTTCTCAACTGAGTGAGCATCATGGAGGGAGAAGAAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR TCA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGGAGGCTTCTTTATCATaGTGGAGATGCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: QWSDLRESIERLLQARIWEASLS*WRCPGS
Trigger: TGAGCCTGGGCATCTCCATCATGATAAAGAAGCCTC...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCAGAGGCTTCTTTATCATaGTGGAGATGCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVAEASLS*WRCPGS
Trigger: TGAGCCTGGGCATCTCCATCATGATAAAGAAGCCTC...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTAATGCACGTTATCGATaGGAGCAAACTACTGAACTA +
Preference number: 4 (lower is better)
Translates to: QTENCGLNLLSRLATRSCNARYR*EQTTEL
Trigger: TAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATT...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp TCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTGGCTCAGGAAAGCGGAAAGCGCTGTaGTCCTGCACTGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SAIFVSCPTPRRVKSGSGKRKAL*SCTVFL
Trigger: GAGAAACACAGTGCAGGAGCACAGCGCTTTCCGCTT...TCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGATCTGGATGACAAACTaGACATCTGCGTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKIWMTN*TSASVG
Trigger: CCCCACTGACGCAGATGTGCAGTTTGTCATCCAGAT...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp TTTCTTTCTTCTCCCTCCATGATGCTCACTCAGTTGAGAACTCAAGAAGGGAGGGCCCGGAGCACGCTTTaGCCCATTTTCTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: FLSSPSMMLTQLRTQEGRARSTL*PIFFCL
Trigger: CAGGCAGAAGAAAATGGGGCAAAGCGTGCTCCGGGC...CCTCCCTTCTTGAGTTCTCAACTGAGTGAGCATCATGGAGGGAGAAGAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR GCA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGGCCCGGAGCACGCTTTaGCCCATTTTCTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RQEQICSESTKHLRVTLGARSTL*PIFFCL
Trigger: CAGGCAGAAGAAAATGGGGCAAAGCGTGCTCCGGGC...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGTCGGGCCACTCCGTCTaGTGTTGTTTTGGTAAACAC +
Preference number: 4 (lower is better)
Translates to: QWSDLRESIERLLQARIWSGHSV*CCFGKH
Trigger: GTGTTTACCAAAACAACAGCAGACGGAGTGGCCCGA...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCATCGGGCCACTCCGTCTaGTGTTGTTTTGGTAAACAC +
Preference number: 4 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVASGHSV*CCFGKH
Trigger: GTGTTTACCAAAACAACAGCAGACGGAGTGGCCCGA...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGCGGTGGTGTTCTGGTTaGTGTTGTATAACTGCACGG +
Preference number: 4 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKRWCSG*CCITAR
Trigger: CCGTGCAGTTATACAACACCAACCAGAACACCACCG...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAAGGAAGGGCTTCTCGGTaGTGTTCTGGTTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQGRASR*CSGWCC
Trigger: ACAACACCAACCAGAACACCACCGAGAAGCCCTTCC...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCAAAGGCTGGGCGCATCTaGATGACAAACTGCACATCT +
Preference number: 4 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVAKAGRI*MTNCTS
Trigger: AGATGTGCAGTTTGTCATCCAGATGCGCCCAGCCTT...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACAAGCTGACAAGAGCATaGGCGCAACTCAGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHKLTRA*AQLRSR
Trigger: ACGACTCCTGAGTTGCGCCCATGCTCTTGTCAGCTT...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTTCAGGCTCAGAGCGCTaGTCTTGTCCTTACTCCCGG +
Preference number: 4 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARSGSER*SCPYSR
Trigger: CCGGGAGTAAGGACAAGACCAGCGCTCTGAGCCTGA...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGCTGGGCGCATCTGGATaGCAAACTGCACATCTGCGT +
Preference number: 4 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPLGASG*QTAHLR
Trigger: ACGCAGATGTGCAGTTTGTCATCCAGATGCGCCCAG...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp TCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTGGCTCAGGAGGAAAGCTTCTGCTATaGCCAGTATTGCGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: SAIFVSCPTPRRVKSGSGGKLLL*PVLRRV
Trigger: CACACGACGCAATACTGGTCATAGCAGAAGCTTTCC...TCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACGGAAAGCTTCTGCTATaGCCAGTATTGCGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHGKLLL*PVLRRV
Trigger: CACACGACGCAATACTGGTCATAGCAGAAGCTTTCC...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCATATGGTCCGATTCTCTaGGGATGCACTGTCATTGCT +
Preference number: 4 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVAYGPIL*GCTVIA
Trigger: AGCAATGACAGTGCATCCTCAGAGAATCGGACCATA...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp GGGATCCATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGGAAAAATTCTTTTGTTaGACCGGAGTCCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GIHFRKAPRGILIVPRPLEKFFC*TGVQGP
Trigger: GGGACCCTGGACTCCGGTTCAACAAAAGAATTTTTC...CAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATGGATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGCACAGATGGCTCCGCTaGTTTCATGTAAGACCACAT +
Preference number: 4 (lower is better)
Translates to: QWSDLRESIERLLQARIWHRWLR*FHVRPH
Trigger: ATGTGGTCTTACATGAAATCAGCGGAGCCATCTGTG...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGTCCGTGGTGTACACTTaGAAGGCATACTTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKSVVYT*KAYLAE
Trigger: CTCTGCTAAGTATGCCTTTCAAGTGTACACCACGGA...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACGCAATATTCGTGTCATaGCCGACACCAAGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHAIFVS*PTPRRV
Trigger: CACTCTCCTTGGTGTCGGGCATGACACGAATATTGC...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp TCCCTCCATGATGCTCACTCAGTTGAGAACTCAAGAAGGGAGGAGGTAGTGCTGTTGGTGTTGTATAACTaGACGGCAAAGCGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: SLHDAHSVENSRREEVVLLVLYN*TAKRKA
Trigger: CGCTTTCCGCTTTGCCGTGCAGTTATACAACACCAA...CAGCACTACCTCCTCCCTTCTTGAGTTCTCAACTGAGTGAGCATCATGGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR GCA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGTTGGTGTTGTATAACTaGACGGCAAAGCGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: QWSDLRESIERLLQARIWLVLYN*TAKRKA
Trigger: CGCTTTCCGCTTTGCCGTGCAGTTATACAACACCAA...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGGTAACAAAGGATGTGTaGAGGGCCCCACAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRVTKDV*RAPQKE
Trigger: CTCCTTCTGTGGGGCCCTGCACACATCCTTTGTTAC...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCAGTAGCGGAAAGCTTCTaGTATGACCAGTATTGCGTC +
Preference number: 4 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVAVAESF*YDQYCV
Trigger: GACGCAATACTGGTCATAGCAGAAGCTTTCCGCTAC...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACATCACATGCCTCCAGTaGGAAGGGATCCCTAGATCT +
Preference number: 4 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHITCLQ*EGIPRS
Trigger: AGATCTAGGGATCCCTTCCCACTGGAGGCATGTGAT...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACACCCCTCTCGAGAACTaGGAGCAGAAAGCATTTGTC +
Preference number: 4 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHTPLEN*EQKAFV
Trigger: GACAAATGCTTTCTGCTCCCAGTTCTCGAGAGGGGT...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAAAAGGCTGGGCGCATCTaGATGACAAACTGCACATCT +
Preference number: 4 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQKAGRI*MTNCTS
Trigger: AGATGTGCAGTTTGTCATCCAGATGCGCCCAGCCTT...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTAGCGCCCTTCAAGGCTaGGCGCATCTGGATGACAAA +
Preference number: 4 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARSALQG*AHLDDK
Trigger: TTTGTCATCCAGATGCGCCCAGCCTTGAAGGGCGCT...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAAAGAAAAAGAATTCGCTaGCTCTTACACCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQRKRIR*LLHPLP
Trigger: GGGGAGGGGGTGTAAGAGCCAGCGAATTCTTTTTCT...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp TGGGTTCAACCTGCAACTTTACAGCTTCACACACCCAGGCTGAACTTCTTTCTTTTCCCTGATGCTTCCTaGCCAAGGCAGGTAGTCCCT +
Preference number: 4 (lower is better)
Translates to: WVQPATLQLHTPRLNFFLFPDAS*PRQVVP
Trigger: AGGGACTACCTGCCTTGGCCAGGAAGCATCAGGGAA...AAGAAAGAAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGGTTGAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CCA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGGTGAGCTTCCCGCGCTaGGACATTATAGCATTCATA +
Preference number: 4 (lower is better)
Translates to: GRYAVSYLIAHGAVERSEVSFPR*DIIAFI
Trigger: TATGAATGCTATAATGTCCCAGCGCGGGAAGCTCAC...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR CAA 72 bp TCTGATGATGCCAACGGCAGGTATGCAGTTAGTTACTaGATAGCCCATGGAGCAGTGGAGCGATCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: SDDANGRYAVSY*IAHGAVERSER
Trigger: TCTCTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCCGTTGGCATCATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp TTCTTCTCCCTCCATGATGCTCACTCAGTTGAGAACTCAAGAAGGGAGGAGGTAAAAGTCCACCTATGCTaGTGGTGTTGGGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: FFSLHDAHSVENSRREEVKVHLC*WCWGIL
Trigger: GAGGATTCCCCAACACCATCAGCATAGGTGGACTTT...TACCTCCTCCCTTCTTGAGTTCTCAACTGAGTGAGCATCATGGAGGGAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR TCA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACGGTCAGGGTGTTCATTaGCATCTGGTCATAGAATCC +
Preference number: 4 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHGQGVH*HLVIES
Trigger: GGATTCTATGACCAGATGTCAATGAACACCCTGACC...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAACTGGGCGCATCTGGATaGCAAACTGCACATCTGCGT +
Preference number: 4 (lower is better)
Translates to: QEQICSESTKHLRVTLGKLGASG*QTAHLR
Trigger: ACGCAGATGTGCAGTTTGTCATCCAGATGCGCCCAG...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp TTCTTCTCCCTCCATGATGCTCACTCAGTTGAGAACTCAAGAAGGGAGGAGGTATCCAATTGTTTTCCCTaGTGCTTCCTGGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: FFSLHDAHSVENSRREEVSNCFP*CFLAKA
Trigger: TGCCTTGGCCAGGAAGCATCAGGGAAAACAATTGGA...TACCTCCTCCCTTCTTGAGTTCTCAACTGAGTGAGCATCATGGAGGGAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR TCA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACTCAATATCAATTCCTTaGCTCCAGGGCACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHSISIP*LQGTAG
Trigger: TCCTGCTGTGCCCTGGAGTCAAGGAATTGATATTGA...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp TCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTGGCTCAGGATCAATATCAATTCCTTaGCTCCAGGGCACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SAIFVSCPTPRRVKSGSGSISIP*LQGTAG
Trigger: TCCTGCTGTGCCCTGGAGTCAAGGAATTGATATTGA...TCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGGAGGCTTCTTTATCATaGTGGAGATGCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: VVAFSVCSIILSVGGRSREASLS*WRCPGS
Trigger: TGAGCCTGGGCATCTCCATCATGATAAAGAAGCCTC...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACGAAAAATTCTTTTGTTaGACCGGAGTCCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHEKFFC*TGVQGP
Trigger: GGGACCCTGGACTCCGGTTCAACAAAAGAATTTTTC...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAACACAGATGGCTCCGCTaGTTTCATGTAAGACCACAT +
Preference number: 4 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQHRWLR*FHVRPH
Trigger: ATGTGGTCTTACATGAAATCAGCGGAGCCATCTGTG...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACAACAGATCTGTGAGCTaGAATTCCAGGCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHNRSVS*NSRLLG
Trigger: TCCAAGGAGCCTGGAATTTCAGCTCACAGATCTGTT...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGAGAAAAACAGATCTGTaGGCTGAAATTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKRKTDL*AEIPGS
Trigger: GGAGCCTGGAATTTCAGCTCACAGATCTGTTTTTCT...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGAAGCGGAAAGCGCTGTaGTCCTGCACTGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPKRKAL*SCTVFL
Trigger: GAGAAACACAGTGCAGGAGCACAGCGCTTTCCGCTT...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGGTAACAAAGGATGTGTaGAGGGCCCCACAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RQEQICSESTKHLRVTLGVTKDV*RAPQKE
Trigger: CTCCTTCTGTGGGGCCCTGCACACATCCTTTGTTAC...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp TGGGTTCAACCTGCAACTTTACAGCTTCACACACCCAGGCTGAACTTCTTTCTTTGCCCCATTTTCTTCTaGCTGGCCATGCTACGCCTA +
Preference number: 4 (lower is better)
Translates to: WVQPATLQLHTPRLNFFLCPIFF*LAMLRL
Trigger: TAGGCGTAGCATGGCCAGGCAGAAGAAAATGGGGCA...AAGAAAGAAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGGTTGAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR GCA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTGCCCCATTTTCTTCTaGCTGGCCATGCTACGCCTA +
Preference number: 4 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPCPIFF*LAMLRL
Trigger: TAGGCGTAGCATGGCCAGGCAGAAGAAAATGGGGCA...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCAGTTGTTTTGCACTGCTaGTTCCATAATCGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVAVVLHC*FHNRLE
Trigger: CTCCAAGCGATTATGGAAGCAGCAGTGCAAAACAAC...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGCCAGTTGTTTTGCACTaGTGCTTCCATAATCGCTTG +
Preference number: 4 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKPVVLH*CFHNRL
Trigger: CAAGCGATTATGGAAGCAGCAGTGCAAAACAACTGG...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGCCAGTTGTTTTGCACTaGTGCTTCCATAATCGCTTG +
Preference number: 4 (lower is better)
Translates to: GRYAVSYLIAHGAVERSEPVVLH*CFHNRL
Trigger: CAAGCGATTATGGAAGCAGCAGTGCAAAACAACTGG...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGATGTTGGCTCCCCCATaGATGACTCTTTCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: GRYAVSYLIAHGAVERSEMLAPP*MTLSSK
Trigger: TTTACTGGAAAGAGTCATGCATGGGGGAGCCAACAT...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCACTGGAAACTTCCCAATaGACGTTATCGATGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVALETSQ*TLSMRA
Trigger: TGCTCTCATCGATAACGTGCATTGGGAAGTTTCCAG...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGCGAGCTCCTAGTTTTTaGAGTCTGGAAACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: QWSDLRESIERLLQARIWRAPSF*SLETSQ
Trigger: TTGGGAAGTTTCCAGACTGCAAAAACTAGGAGCTCG...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CCTGCAACTTTACAGCTTCACACACCCAGGCTGAACTTCTTTCTTTCTTCTCCCCGGTGGTGTTCTGGTTaGTGTTGTATAACTGCACGG +
Preference number: 4 (lower is better)
Translates to: PATLQLHTPRLNFFLSSPRWCSG*CCITAR
Trigger: CCGTGCAGTTATACAACACCAACCAGAACACCACCG...GGGAGAAGAAAGAAAGAAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CCA 90 bp TTCTTCTCCCTCCATGATGCTCACTCAGTTGAGAACTCAAGAAGGGAGGAGGTACGGTGGTGTTCTGGTTaGTGTTGTATAACTGCACGG +
Preference number: 4 (lower is better)
Translates to: FFSLHDAHSVENSRREEVRWCSG*CCITAR
Trigger: CCGTGCAGTTATACAACACCAACCAGAACACCACCG...TACCTCCTCCCTTCTTGAGTTCTCAACTGAGTGAGCATCATGGAGGGAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CCA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGTTCTCGGTGGTGTTCTaGTTGGTGTTGTATAACTGC +
Preference number: 4 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKFSVVF*LVLYNC
Trigger: GCAGTTATACAACACCAACCAGAACACCACCGAGAA...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGTTCTCGGTGGTGTTCTaGTTGGTGTTGTATAACTGC +
Preference number: 4 (lower is better)
Translates to: GRYAVSYLIAHGAVERSEFSVVF*LVLYNC
Trigger: GCAGTTATACAACACCAACCAGAACACCACCGAGAA...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp TTTCTTTCTTCTCCCTCCATGATGCTCACTCAGTTGAGAACTCAAGAAGGGAGGGGAAGGGCTTCTCGGTaGTGTTCTGGTTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: FLSSPSMMLTQLRTQEGRGRASR*CSGWCC
Trigger: ACAACACCAACCAGAACACCACCGAGAAGCCCTTCC...CCTCCCTTCTTGAGTTCTCAACTGAGTGAGCATCATGGAGGGAGAAGAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CCA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGAAGGCTGGGCGCATCTaGATGACAAACTGCACATCT +
Preference number: 4 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRKAGRI*MTNCTS
Trigger: AGATGTGCAGTTTGTCATCCAGATGCGCCCAGCCTT...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp TGGGTTCAACCTGCAACTTTACAGCTTCACACACCCAGGCTGAACTTCTTTCTTAAGCTGACAAGAGCATaGGCGCAACTCAGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: WVQPATLQLHTPRLNFFLKLTRA*AQLRSR
Trigger: ACGACTCCTGAGTTGCGCCCATGCTCTTGTCAGCTT...AAGAAAGAAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGGTTGAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611689.4
CDS-3UTR CCA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAGCTGACAAGAGCATaGGCGCAACTCAGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: RQEQICSESTKHLRVTLGKLTRA*AQLRSR
Trigger: ACGACTCCTGAGTTGCGCCCATGCTCTTGTCAGCTT...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGATGCGCCTGAATTCTTaGACGTCCTTTATGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GRYAVSYLIAHGAVERSEMRLNS*TSFMFP
Trigger: GGGAAACATAAAGGACGTCCAAGAATTCAGGCGCAT...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTTTTCATACACATCGATaGTATAATTTGTCCTACGTC +
Preference number: 4 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLFHTHR*YNLSYV
Trigger: GACGTAGGACAAATTATACCATCGATGTGTATGAAA...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAATCTAAGGGTCACACTTaGGAAATGAATGCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQSKGHT*EMNASS
Trigger: GGAGCTCGCATTCATTTCCCAAGTGTGACCCTTAGA...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp ACTCTCTGTTCCATACACGTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTTACAGGCGTTCTTaGAGTCACCGCCCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: TLCSIHVVAFSVCSIILSVYRRS*SHRPRC
Trigger: GCAGCGGGGGCGGTGACTCCAAGAACGCCTGTAAAC...ACTCAGAATTATGCTACATACAGAGAAGGCTACAACGTGTATGGAACAGAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp GGGATCCATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGTTTGGGTGTTCTTTGTaGGTTTCATGCGTTTGGACT +
Preference number: 4 (lower is better)
Translates to: GIHFRKAPRGILIVPRPLFGCSL*VSCVWT
Trigger: AGTCCAAACGCATGAAACTCACAAAGAACACCCAAA...CAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATGGATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTAAAGTCCACCTATGCTaGTGGTGTTGGGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARKVHLC*WCWGIL
Trigger: GAGGATTCCCCAACACCATCAGCATAGGTGGACTTT...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp GTACACTTGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTGTTCTGGGCGCATCTGGATaGCAAACTGCACATCTGCGT +
Preference number: 4 (lower is better)
Translates to: VHLKGILSRESRAKHSVVLGASG*QTAHLR
Trigger: ACGCAGATGTGCAGTTTGTCATCCAGATGCGCCCAG...AACAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGTCATTGCTGATTTGCTaGTCTGAGAAAGGCACAAAC +
Preference number: 4 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKSLLIC*SEKGTN
Trigger: GTTTGTGCCTTTCTCAGATCAGCAAATCAGCAATGA...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGATGCACTGTCATTGCTaGTTTGCTGATCTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GRYAVSYLIAHGAVERSEMHCHC*FADLRK
Trigger: CTTTCTCAGATCAGCAAATCAGCAATGACAGTGCAT...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGGGAAAAGAACTACGCTaGCTCCAATGTAAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: GRYAVSYLIAHGAVERSEGKELR*LQCKQR
Trigger: TCTTTGCTTACATTGGAGTCAGCGTAGTTCTTTTCC...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp TCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTGGCTCAGGAAGAAAAACAGATCTGTaGGCTGAAATTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SAIFVSCPTPRRVKSGSGRKTDL*AEIPGS
Trigger: GGAGCCTGGAATTTCAGCTCACAGATCTGTTTTTCT...TCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACGCCTCTTCATCTCAGTaGCGTTTCCTCTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHASSSQ*RFLSEK
Trigger: TTTTTCAGAGAGGAAACGTCACTGAGATGAAGAGGC...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp TCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTGGCTCAGGAAATACCTCATGGCAATaGGGCTCTGTAGTTTATGCC +
Preference number: 4 (lower is better)
Translates to: SAIFVSCPTPRRVKSGSGNTSWQ*GSVVYA
Trigger: GGCATAAACTACAGAGCCTCATTGCCATGAGGTATT...TCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp CCAATGCACGTTATCGATGAGAGCAAACTACTGAACTACAGGAAGCATACGTCGGCAATATTCGTGTCATaGCCGACACCAAGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: PMHVIDESKLLNYRKHTSAIFVS*PTPRRV
Trigger: CACTCTCCTTGGTGTCGGGCATGACACGAATATTGC...CGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAAAAAGCGCTGTGCTCCTaGACTGTGTTTCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQKALCS*TVFLMK
Trigger: TTTCATGAGAAACACAGTGCAGGAGCACAGCGCTTT...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAAAAGCGGAAAGCGCTGTaGTCCTGCACTGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: QEQICSESTKHLRVTLGKKRKAL*SCTVFL
Trigger: GAGAAACACAGTGCAGGAGCACAGCGCTTTCCGCTT...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp CCTGCAACTTTACAGCTTCACACACCCAGGCTGAACTTCTTTCTTTCTTCTCCCTTGGTGTTGTATAACTaGACGGCAAAGCGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: PATLQLHTPRLNFFLSSPLVLYN*TAKRKA
Trigger: CGCTTTCCGCTTTGCCGTGCAGTTATACAACACCAA...GGGAGAAGAAAGAAAGAAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR GCA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGTTGGTGTTGTATAACTaGACGGCAAAGCGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRLVLYN*TAKRKA
Trigger: CGCTTTCCGCTTTGCCGTGCAGTTATACAACACCAA...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGGTAACAAAGGATGTGTaGAGGGCCCCACAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPVTKDV*RAPQKE
Trigger: CTCCTTCTGTGGGGCCCTGCACACATCCTTTGTTAC...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTATCTGGATGACAAACTaGACATCTGCGTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARIWMTN*TSASVG
Trigger: CCCCACTGACGCAGATGTGCAGTTTGTCATCCAGAT...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACCCAGTTGTTTTGCACTaGTGCTTCCATAATCGCTTG +
Preference number: 4 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHPVVLH*CFHNRL
Trigger: CAAGCGATTATGGAAGCAGCAGTGCAAAACAACTGG...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp TCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTGGCTCAGGATGCTATGACCAGTATTaGGTCGTGTGTCAATGCAGA +
Preference number: 4 (lower is better)
Translates to: SAIFVSCPTPRRVKSGSGCYDQY*VVCQCR
Trigger: TCTGCATTGACACACGACGCAATACTGGTCATAGCA...TCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACTGCTATGACCAGTATTaGGTCGTGTGTCAATGCAGA +
Preference number: 4 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHCYDQY*VVCQCR
Trigger: TCTGCATTGACACACGACGCAATACTGGTCATAGCA...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGGTCATTCCTTGTACTTaGACCATTTTCAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: GRYAVSYLIAHGAVERSEVIPCT*TIFRAL
Trigger: GAGAGCTCTGAAAATGGTGCAAGTACAAGGAATGAC...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAAGTCCAGGGTCCCATATaGAATTTCAGTCTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQVQGPI*NFSLFS
Trigger: GCTAAACAGACTGAAATTGCATATGGGACCCTGGAC...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTATTAAAGAACATGGTGTTTATATACTCTGCAGTGGTATCAAACCTGCTGTCCCGCCTTaGAACGCGGTCCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: VCVCIKEHGVYILCSGIKPAVPP*NAVLSP
Trigger: CGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGG...TTTGATACCACTGCAGAGTATATAAACACCATGTTCTTTAATACACACACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGCGGTGGTGTTCTGGTTaGTGTTGTATAACTGCACGG +
Preference number: 4 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPRWCSG*CCITAR
Trigger: CCGTGCAGTTATACAACACCAACCAGAACACCACCG...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACTTCTCGGTGGTGTTCTaGTTGGTGTTGTATAACTGC +
Preference number: 4 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHFSVVF*LVLYNC
Trigger: GCAGTTATACAACACCAACCAGAACACCACCGAGAA...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTAGAAAAAGAATTCGCTaGCTCTTACACCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARRKRIR*LLHPLP
Trigger: GGGGAGGGGGTGTAAGAGCCAGCGAATTCTTTTTCT...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAAGCTTCCATAATCGCTTaGAGGATGGAAAATCCTCGT +
Preference number: 4 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQASIIA*RMENPR
Trigger: ACGAGGATTTTCCATCCTCCAAGCGATTATGGAAGC...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACATGCGCCTGAATTCTTaGACGTCCTTTATGTTTCCC +
Preference number: 4 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHMRLNS*TSFMFP
Trigger: GGGAAACATAAAGGACGTCCAAGAATTCAGGCGCAT...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAAATCAGGAGGACTTTGTaGGTCACGAGGTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQIRRTL*VTRFFI
Trigger: AATGAAGAACCTCGTGACCCACAAAGTCCTCCTGAT...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGCTAGTTTTTGCAGTCTaGAAACTTCCCAATGCACGT +
Preference number: 4 (lower is better)
Translates to: QWSDLRESIERLLQARIWLVFAV*KLPNAR
Trigger: ACGTGCATTGGGAAGTTTCCAGACTGCAAAAACTAG...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp GGGATCCATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTAGTTTTTGCAGTCTaGAAACTTCCCAATGCACGT +
Preference number: 4 (lower is better)
Translates to: GIHFRKAPRGILIVPRPLLVFAV*KLPNAR
Trigger: ACGTGCATTGGGAAGTTTCCAGACTGCAAAAACTAG...CAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATGGATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp GGGATCCATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGTTTGGACTCTGCCCGTaGTTTGTAACAGAATTCTAT +
Preference number: 4 (lower is better)
Translates to: GIHFRKAPRGILIVPRPLFGLCP*FVTEFY
Trigger: ATAGAATTCTGTTACAAATCACGGGCAGAGTCCAAA...CAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATGGATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAAAAAGTCCACCTATGCTaGTGGTGTTGGGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: QEQICSESTKHLRVTLGKKVHLC*WCWGIL
Trigger: GAGGATTCCCCAACACCATCAGCATAGGTGGACTTT...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGGGTCAGGGTGTTCATTaGCATCTGGTCATAGAATCC +
Preference number: 4 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPGQGVH*HLVIES
Trigger: GGATTCTATGACCAGATGTCAATGAACACCCTGACC...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp ACTCTCTGTTCCATACACGTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTCGCCTAAAACGAAGCTaGCAAGAGCATGGGCGCAAC +
Preference number: 4 (lower is better)
Translates to: TLCSIHVVAFSVCSIILSRLKRS*QEHGRN
Trigger: GTTGCGCCCATGCTCTTGTCAGCTTCGTTTTAGGCG...ACTCAGAATTATGCTACATACAGAGAAGGCTACAACGTGTATGGAACAGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp TCAACTTTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGAGGAGGTGCAGCAGCCCATaGTCTTTGCAGCACGGCAGA +
Preference number: 4 (lower is better)
Translates to: STLILSHLSFIFLFYLQRRCSSP*SLQHGR
Trigger: TCTGCCGTGCTGCAAAGATCATGGGCTGCTGCACCT...CCTCTGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAAAGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR TCA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCACTTTTCGAGAGCCACTaGCTTTCATTTCATACACAT +
Preference number: 4 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVALFESH*LSFHTH
Trigger: ATGTGTATGAAATGAAAGTCAGTGGCTCTCGAAAAG...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTATGGTCCGATTCTCTaGGGATGCACTGTCATTGCT +
Preference number: 4 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPYGPIL*GCTVIA
Trigger: AGCAATGACAGTGCATCCTCAGAGAATCGGACCATA...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCAGTACATTACATATGGTaGTTCCAGAATGGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVAVHYIW*FQNGSH
Trigger: GTGACTACCATTCTGGAATCACCATATGTAATGTAC...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp GGGATCCATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCCTGGTTTTGATTTCTaGGGCTTCTTTATCATGATG +
Preference number: 4 (lower is better)
Translates to: GIHFRKAPRGILIVPRPLPGFDF*GFFIMM
Trigger: CATCATGATAAAGAAGCCTCAGAAATCAAAACCAGG...CAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATGGATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTGAAAAATTCTTTTGTTaGACCGGAGTCCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GLKFWVFFVSFMRLDSAREKFFC*TGVQGP
Trigger: GGGACCCTGGACTCCGGTTCAACAAAAGAATTTTTC...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTCACAGATGGCTCCGCTaGTTTCATGTAAGACCACAT +
Preference number: 4 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARHRWLR*FHVRPH
Trigger: ATGTGGTCTTACATGAAATCAGCGGAGCCATCTGTG...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAACAGATCTGTGAGCTaGAATTCCAGGCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: RQEQICSESTKHLRVTLGNRSVS*NSRLLG
Trigger: TCCAAGGAGCCTGGAATTTCAGCTCACAGATCTGTT...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGTCCGTGGTGTACACTTaGAAGGCATACTTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RQEQICSESTKHLRVTLGSVVYT*KAYLAE
Trigger: CTCTGCTAAGTATGCCTTTCAAGTGTACACCACGGA...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGATTTCAATGATGGTTTaGATTGTCGCGAGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: QWSDLRESIERLLQARIWISMMV*IVASLR
Trigger: TCTGAGACTCGCGACAATGCAAACCATCATTGAAAT...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCAATTTCAATGATGGTTTaGATTGTCGCGAGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVAISMMV*IVASLR
Trigger: TCTGAGACTCGCGACAATGCAAACCATCATTGAAAT...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp CCAATGCACGTTATCGATGAGAGCAAACTACTGAACTACAGGAAGCATACGTCGTTGGTGTTGTATAACTaGACGGCAAAGCGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: PMHVIDESKLLNYRKHTSLVLYN*TAKRKA
Trigger: CGCTTTCCGCTTTGCCGTGCAGTTATACAACACCAA...CGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAAATCTGGATGACAAACTaGACATCTGCGTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QEQICSESTKHLRVTLGKIWMTN*TSASVG
Trigger: CCCCACTGACGCAGATGTGCAGTTTGTCATCCAGAT...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp TCAACTTTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGAGGGCAGCCCATGATCTTTaGAGCACGGCAGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: STLILSHLSFIFLFYLQRAAHDL*STAELS
Trigger: GGACAGCTCTGCCGTGCTGCAAAGATCATGGGCTGC...CCTCTGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAAAGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR GCA 90 bp ATGGGTTTGGGTTCAACCTGCAACTTTACAGCTTCACACACCCAGGCTGAACTTGGTTTGGGTTCAACCTaGAACTTTACAGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: MGLGSTCNFTASHTQAELGLGST*NFTASH
Trigger: GTGTGAAGCTGTAAAGTTGCAGGTTGAACCCAAACC...AAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGGTTGAACCCAAACCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR GCA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGGTTGTTTTGCACTGCTaGTTCCATAATCGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRVVLHC*FHNRLE
Trigger: CTCCAAGCGATTATGGAAGCAGCAGTGCAAAACAAC...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAAAAGTATCGCTTTTCCTaGCTCCTGTCCATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQKYRFS*LLSISS
Trigger: TGAAGAAATGGACAGGAGGCAGGAAAAGCGATACTT...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGGTAGCGGAAAGCTTCTaGTATGACCAGTATTGCGTC +
Preference number: 4 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPVAESF*YDQYCV
Trigger: GACGCAATACTGGTCATAGCAGAAGCTTTCCGCTAC...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp GGGATCCATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGTCATTTCCTTCCAGTTaGTCATGGTTCTTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: GIHFRKAPRGILIVPRPLSFPSS*SWFFLY
Trigger: GTACAAGAAGAACCATGAGCAACTGGAAGGAAATGA...CAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATGGATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp GGGATCCATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGGCAGGCTTAAAGTTTTaGGTGTTCTTTGTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GIHFRKAPRGILIVPRPLAGLKF*VFFVSF
Trigger: GAAACTCACAAAGAACACCCAAAACTTTAAGCCTGC...CAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATGGATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGATCACATGCCTCCAGTaGGAAGGGATCCCTAGATCT +
Preference number: 4 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPITCLQ*EGIPRS
Trigger: AGATCTAGGGATCCCTTCCCACTGGAGGCATGTGAT...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGCGGTGGTGTTCTGGTTaGTGTTGTATAACTGCACGG +
Preference number: 4 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPRWCSG*CCITAR
Trigger: CCGTGCAGTTATACAACACCAACCAGAACACCACCG...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGCATAGAATCCAAAGATaGCATACACCCCTCTCGAGA +
Preference number: 4 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRHRIQR*HTPLSR
Trigger: TCTCGAGAGGGGTGTATGCCATCTTTGGATTCTATG...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACTTAGTGGTGCATTCTTaGCTTCAGGGAATTCCCTTT +
Preference number: 4 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHLVVHS*LQGIPF
Trigger: AAAGGGAATTCCCTGAAGCCAAGAATGCACCACTAA...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACTTAGTGGTGCATTCTTaGCTTCAGGGAATTCCCTTT +
Preference number: 4 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHLVVHS*LQGIPF
Trigger: AAAGGGAATTCCCTGAAGCCAAGAATGCACCACTAA...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGCAATGTTATAGTGAGTaGAGCAACAGCTATATCAGC +
Preference number: 4 (lower is better)
Translates to: GRYAVSYLIAHGAVERSEQCYSE*SNSYIS
Trigger: GCTGATATAGCTGTTGCTCCACTCACTATAACATTG...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGATCAGGAGGACTTTGTaGGTCACGAGGTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRIRRTL*VTRFFI
Trigger: AATGAAGAACCTCGTGACCCACAAAGTCCTCCTGAT...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp ACTCTCTGTTCCATACACGTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTAGGCGAACTTTCCCTTaGACTTTCGCACTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: TLCSIHVVAFSVCSIILSRRTFP*TFALGP
Trigger: TGGCCCGAGTGCGAAAGTCCAAGGGAAAGTTCGCCT...ACTCAGAATTATGCTACATACAGAGAAGGCTACAACGTGTATGGAACAGAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAAAAATTCCAGGCTCCTTaGAAAGCCCCGGGATCCATT +
Preference number: 4 (lower is better)
Translates to: QEQICSESTKHLRVTLGKKFQAP*KAPGSI
Trigger: AATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTT...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp GTACACTTGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTGTTGCGGTCCTGTCTCCGTaGTGTACACTTGAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: VHLKGILSRESRAKHSVVAVLSP*CTLERH
Trigger: ATGCCTTTCAAGTGTACACCACGGAGACAGGACCGC...AACAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CCAATGCACGTTATCGATGAGAGCAAACTACTGAACTACAGGAAGCATACGTCGTCTAAGGGTCACACTTaGGAAATGAATGCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PMHVIDESKLLNYRKHTSSKGHT*EMNASS
Trigger: GGAGCTCGCATTCATTTCCCAAGTGTGACCCTTAGA...CGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGGTGAGCTTCCCGCGCTaGGACATTATAGCATTCATA +
Preference number: 4 (lower is better)
Translates to: RQEQICSESTKHLRVTLGVSFPR*DIIAFI
Trigger: TATGAATGCTATAATGTCCCAGCGCGGGAAGCTCAC...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAATTTGGACTCTGCCCGTaGTTTGTAACAGAATTCTAT +
Preference number: 4 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQFGLCP*FVTEFY
Trigger: ATAGAATTCTGTTACAAATCACGGGCAGAGTCCAAA...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp GGGATCCATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGATCAGTTTTTCCTATTaGAAGGTCATTGCACCATCA +
Preference number: 4 (lower is better)
Translates to: GIHFRKAPRGILIVPRPLISFSY*KVIAPS
Trigger: TGATGGTGCAATGACCTTTCAATAGGAAAAACTGAT...CAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATGGATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAAGGTCAGGGTGTTCATTaGCATCTGGTCATAGAATCC +
Preference number: 4 (lower is better)
Translates to: QEQICSESTKHLRVTLGKGQGVH*HLVIES
Trigger: GGATTCTATGACCAGATGTCAATGAACACCCTGACC...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp ATGGGTTTGGGTTCAACCTGCAACTTTACAGCTTCACACACCCAGGCTGAACTTGGTAGTGCTGACTTGTaGTCTTGTTCTCATCTTACA +
Preference number: 4 (lower is better)
Translates to: MGLGSTCNFTASHTQAELGSADL*SCSHLT
Trigger: TGTAAGATGAGAACAAGATCACAAGTCAGCACTACC...AAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGGTTGAACCCAAACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR TCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAATCAATATCAATTCCTTaGCTCCAGGGCACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QEQICSESTKHLRVTLGKSISIP*LQGTAG
Trigger: TCCTGCTGTGCCCTGGAGTCAAGGAATTGATATTGA...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACCTTTTCGAGAGCCACTaGCTTTCATTTCATACACAT +
Preference number: 4 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHLFESH*LSFHTH
Trigger: ATGTGTATGAAATGAAAGTCAGTGGCTCTCGAAAAG...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAAGTACATTACATATGGTaGTTCCAGAATGGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQVHYIW*FQNGSH
Trigger: GTGACTACCATTCTGGAATCACCATATGTAATGTAC...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp TCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTGGCTCAGGAGCTTTGAAAAATCTATaGCTTCTTCACGGACCAATG +
Preference number: 4 (lower is better)
Translates to: SAIFVSCPTPRRVKSGSGALKNL*LLHGPM
Trigger: CATTGGTCCGTGAAGAAGTCATAGATTTTTCAAAGC...TCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACGCTTTGAAAAATCTATaGCTTCTTCACGGACCAATG +
Preference number: 4 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHALKNL*LLHGPM
Trigger: CATTGGTCCGTGAAGAAGTCATAGATTTTTCAAAGC...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACGAATACGCCTGGTTTTaGTTTCTGAGGCTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHEYAWF*FLRLLY
Trigger: ATAAAGAAGCCTCAGAAATCAAAACCAGGCGTATTC...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGTGTAAATCTCTTCTTTaGGTGGGAAGTTATCAAAGC +
Preference number: 4 (lower is better)
Translates to: GRYAVSYLIAHGAVERSECKSLL*VGSYQS
Trigger: GCTTTGATAACTTCCCACTCAAAGAAGAGATTTACA...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCAGATACTCAGCTCTATTaGCTTAAAATGCACACTGAA +
Preference number: 4 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVADTQLY*LKMHTE
Trigger: TTCAGTGTGCATTTTAAGTCAATAGAGCTGAGTATC...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACAATGCACGTTATCGATaGGAGCAAACTACTGAACTA +
Preference number: 4 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHNARYR*EQTTEL
Trigger: TAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATT...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp GTGTGTGTGTGTATTAAAGAACATGGTGTTTATATACTCTGCAGTGGTATCAAACATGTTCACACAGCGTaGGCTTCCCGCGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: VCVCIKEHGVYILCSGIKHVHTA*ASRAGT
Trigger: TGTCCCAGCGCGGGAAGCTCACGCTGTGTGAACATG...TTTGATACCACTGCAGAGTATATAAACACCATGTTCTTTAATACACACACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTAAAGCGCTGTGCTCCTaGACTGTGTTTCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARKALCS*TVFLMK
Trigger: TTTCATGAGAAACACAGTGCAGGAGCACAGCGCTTT...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp TGGGTTCAACCTGCAACTTTACAGCTTCACACACCCAGGCTGAACTTCTTTCTTGGTTTGGGTTCAACCTaGAACTTTACAGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: WVQPATLQLHTPRLNFFLGLGST*NFTASH
Trigger: GTGTGAAGCTGTAAAGTTGCAGGTTGAACCCAAACC...AAGAAAGAAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGGTTGAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR GCA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGATGTTGGCTCCCCCATaGATGACTCTTTCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPMLAPP*MTLSSK
Trigger: TTTACTGGAAAGAGTCATGCATGGGGGAGCCAACAT...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGGTCATTCCTTGTACTTaGACCATTTTCAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRVIPCT*TIFRAL
Trigger: GAGAGCTCTGAAAATGGTGCAAGTACAAGGAATGAC...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp CCAATGCACGTTATCGATGAGAGCAAACTACTGAACTACAGGAAGCATACGTCGGTCCAGGGTCCCATATaGAATTTCAGTCTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: PMHVIDESKLLNYRKHTSVQGPI*NFSLFS
Trigger: GCTAAACAGACTGAAATTGCATATGGGACCCTGGAC...CGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAACTAGAAAAGGACACATaGAGTCCGATGGAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: QEQICSESTKHLRVTLGKLEKDT*SPMESH
Trigger: ATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAG...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp AACTTTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGAGGGTGGCGGGTTCATTGGCTaGAAGCTGGGTTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: NFDPVPSQLHLFILSPEGGGFIG*KLGLPK
Trigger: CTTTGGCAAACCCAGCTTGCAGCCAATGAACCCGCC...ACCCTCTGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616590.4
CDS-3UTR CCA 90 bp TGGGTTCAACCTGCAACTTTACAGCTTCACACACCCAGGCTGAACTTCTTTCTTTTCTCGGTGGTGTTCTaGTTGGTGTTGTATAACTGC +
Preference number: 4 (lower is better)
Translates to: WVQPATLQLHTPRLNFFLFSVVF*LVLYNC
Trigger: GCAGTTATACAACACCAACCAGAACACCACCGAGAA...AAGAAAGAAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGGTTGAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CCA 90 bp TTTCTTTCTTCTCCCTCCATGATGCTCACTCAGTTGAGAACTCAAGAAGGGAGGTTCTCGGTGGTGTTCTaGTTGGTGTTGTATAACTGC +
Preference number: 4 (lower is better)
Translates to: FLSSPSMMLTQLRTQEGRFSVVF*LVLYNC
Trigger: GCAGTTATACAACACCAACCAGAACACCACCGAGAA...CCTCCCTTCTTGAGTTCTCAACTGAGTGAGCATCATGGAGGGAGAAGAAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CCA 90 bp ACTCTCTGTTCCATACACGTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGGAAGGGCTTCTCGGTaGTGTTCTGGTTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: TLCSIHVVAFSVCSIILSGRASR*CSGWCC
Trigger: ACAACACCAACCAGAACACCACCGAGAAGCCCTTCC...ACTCAGAATTATGCTACATACAGAGAAGGCTACAACGTGTATGGAACAGAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp GTACACTTGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTGTTAGAAAAAGAATTCGCTaGCTCTTACACCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: VHLKGILSRESRAKHSVVRKRIR*LLHPLP
Trigger: GGGGAGGGGGTGTAAGAGCCAGCGAATTCTTTTTCT...AACAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp TTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGAGGGTAGTTTTCCCTGATGCTTCCTaGCCAAGGCAGGTAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LILSHLSFIFLFYLQRVVFPDAS*PRQVVP
Trigger: AGGGACTACCTGCCTTGGCCAGGAAGCATCAGGGAA...AACTACCCTCTGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CCA 90 bp TTCTTCTCCCTCCATGATGCTCACTCAGTTGAGAACTCAAGAAGGGAGGAGGTACTTCTGTCTCTAAAATaGGTTTGGGTTCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: FFSLHDAHSVENSRREEVLLSLK*VWVQPA
Trigger: TGCAGGTTGAACCCAAACCCATTTTAGAGACAGAAG...TACCTCCTCCCTTCTTGAGTTCTCAACTGAGTGAGCATCATGGAGGGAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CCA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGGCTTCCATAATCGCTTaGAGGATGGAAAATCCTCGT +
Preference number: 4 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPASIIA*RMENPR
Trigger: ACGAGGATTTTCCATCCTCCAAGCGATTATGGAAGC...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTATGCGCCTGAATTCTTaGACGTCCTTTATGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARMRLNS*TSFMFP
Trigger: GGGAAACATAAAGGACGTCCAAGAATTCAGGCGCAT...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp GGGATCCATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGTCATTGTTGACAATCTaGAAACCTGTAATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: GIHFRKAPRGILIVPRPLSLLTI*KPVMLA
Trigger: AGCCAACATTACAGGTTTCCAGATTGTCAACAATGA...CAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATGGATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGCCATATTTTAGTCTCTaGATCCCTTGCACCATATTT +
Preference number: 4 (lower is better)
Translates to: QWSDLRESIERLLQARIWPYFSL*IPCTIF
Trigger: AAATATGGTGCAAGGGATCCAGAGACTAAAATATGG...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGTATTCTAAACACATCTaGGAGTATAGGCAGCATTTC +
Preference number: 4 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKYSKHI*EYRQHF
Trigger: GAAATGCTGCCTATACTCCCAGATGTGTTTAGAATA...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGCTGGAAACATTTCGTTaGAACGATACTTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKLETFR*NDTSSF
Trigger: AAAGGAAGAAGTATCGTTCCAACGAAATGTTTCCAG...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
3UTR CAA 72 bp ATTCTGAGTGTTGGTGGCAGGAGCAGGCTTAAAGTTTaGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: ILSVGGRSRLKV*GVLCEFHAFGL
Trigger: GAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCTGCTCCTGCCACCAACACTCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGTTTGGACTCTGCCCGTaGTTTGTAACAGAATTCTAT +
Preference number: 4 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRFGLCP*FVTEFY
Trigger: ATAGAATTCTGTTACAAATCACGGGCAGAGTCCAAA...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTTTGGGTGTTCTTTGTaGGTTTCATGCGTTTGGACT +
Preference number: 4 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPFGCSL*VSCVWT
Trigger: AGTCCAAACGCATGAAACTCACAAAGAACACCCAAA...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp TGGGTTCAACCTGCAACTTTACAGCTTCACACACCCAGGCTGAACTTCTTTCTTGGTAGTGCTGACTTGTaGTCTTGTTCTCATCTTACA +
Preference number: 4 (lower is better)
Translates to: WVQPATLQLHTPRLNFFLGSADL*SCSHLT
Trigger: TGTAAGATGAGAACAAGATCACAAGTCAGCACTACC...AAGAAAGAAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGGTTGAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR TCA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGTCATTGCTGATTTGCTaGTCTGAGAAAGGCACAAAC +
Preference number: 4 (lower is better)
Translates to: RQEQICSESTKHLRVTLGSLLIC*SEKGTN
Trigger: GTTTGTGCCTTTCTCAGATCAGCAAATCAGCAATGA...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTATGCACTGTCATTGCTaGTTTGCTGATCTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARMHCHC*FADLRK
Trigger: CTTTCTCAGATCAGCAAATCAGCAATGACAGTGCAT...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTGGAAAAGAACTACGCTaGCTCCAATGTAAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARGKELR*LQCKQR
Trigger: TCTTTGCTTACATTGGAGTCAGCGTAGTTCTTTTCC...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp TCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTGGCTCAGGATGTAAATCTCTTCTTTaGGTGGGAAGTTATCAAAGC +
Preference number: 4 (lower is better)
Translates to: SAIFVSCPTPRRVKSGSGCKSLL*VGSYQS
Trigger: GCTTTGATAACTTCCCACTCAAAGAAGAGATTTACA...TCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp TCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTGGCTCAGGAGATACTCAGCTCTATTaGCTTAAAATGCACACTGAA +
Preference number: 4 (lower is better)
Translates to: SAIFVSCPTPRRVKSGSGDTQLY*LKMHTE
Trigger: TTCAGTGTGCATTTTAAGTCAATAGAGCTGAGTATC...TCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAAGCCTCTTCATCTCAGTaGCGTTTCCTCTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: QEQICSESTKHLRVTLGKASSSQ*RFLSEK
Trigger: TTTTTCAGAGAGGAAACGTCACTGAGATGAAGAGGC...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGAATACCTCATGGCAATaGGGCTCTGTAGTTTATGCC +
Preference number: 4 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPNTSWQ*GSVVYA
Trigger: GGCATAAACTACAGAGCCTCATTGCCATGAGGTATT...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp AACTTTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGAGGGTAAGCGGAAAGCGCTGTaGTCCTGCACTGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: NFDPVPSQLHLFILSPEGKRKAL*SCTVFL
Trigger: GAGAAACACAGTGCAGGAGCACAGCGCTTTCCGCTT...ACCCTCTGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR GCA 90 bp TTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGAGGGTAGTTTGCCCCATTTTCTTCTaGCTGGCCATGCTACGCCTA +
Preference number: 4 (lower is better)
Translates to: LILSHLSFIFLFYLQRVVCPIFF*LAMLRL
Trigger: TAGGCGTAGCATGGCCAGGCAGAAGAAAATGGGGCA...AACTACCCTCTGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR GCA 90 bp GTGTGTGTGTGTATTAAAGAACATGGTGTTTATATACTCTGCAGTGGTATCAAAGCCCGGAGCACGCTTTaGCCCATTTTCTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VCVCIKEHGVYILCSGIKARSTL*PIFFCL
Trigger: CAGGCAGAAGAAAATGGGGCAAAGCGTGCTCCGGGC...TTTGATACCACTGCAGAGTATATAAACACCATGTTCTTTAATACACACACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp TTCATCAACTTTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGCAGCCCATGATCTTTaGAGCACGGCAGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FINFDPVPSQLHLFILSPAAHDL*STAELS
Trigger: GGACAGCTCTGCCGTGCTGCAAAGATCATGGGCTGC...TGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAAAGTTGATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR GCA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTAAGTATCGCTTTTCCTaGCTCCTGTCCATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARKYRFS*LLSISS
Trigger: TGAAGAAATGGACAGGAGGCAGGAAAAGCGATACTT...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGTCATTTCCTTCCAGTTaGTCATGGTTCTTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRSFPSS*SWFFLY
Trigger: GTACAAGAAGAACCATGAGCAACTGGAAGGAAATGA...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGTGTAAGCAAAGACAATaGACATCCAGATTTCATAAG +
Preference number: 4 (lower is better)
Translates to: QWSDLRESIERLLQARIWCKQRQ*TSRFHK
Trigger: CTTATGAAATCTGGATGTGCATTGTCTTTGCTTACA...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp ACTCTCTGTTCCATACACGTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTTCGGGCCACTCCGTCTaGTGTTGTTTTGGTAAACAC +
Preference number: 4 (lower is better)
Translates to: TLCSIHVVAFSVCSIILSSGHSV*CCFGKH
Trigger: GTGTTTACCAAAACAACAGCAGACGGAGTGGCCCGA...ACTCAGAATTATGCTACATACAGAGAAGGCTACAACGTGTATGGAACAGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp TCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTGGCTCAGGAGGTGTTTATATACTCTaGAGTGGTATCAAAGAATGG +
Preference number: 4 (lower is better)
Translates to: SAIFVSCPTPRRVKSGSGGVYIL*SGIKEW
Trigger: CCATTCTTTGATACCACTGCAGAGTATATAAACACC...TCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAACTGGAAACTTCCCAATaGACGTTATCGATGAGAGCA +
Preference number: 4 (lower is better)
Translates to: QEQICSESTKHLRVTLGKLETSQ*TLSMRA
Trigger: TGCTCTCATCGATAACGTGCATTGGGAAGTTTCCAG...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp TCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTGGCTCAGGAGTTTATGCCCACACATaGAAATTACGCTTTTATAGC +
Preference number: 4 (lower is better)
Translates to: SAIFVSCPTPRRVKSGSGVYAHT*KLRFYS
Trigger: GCTATAAAAGCGTAATTTGCATGTGTGGGCATAAAC...TCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAAAAGGAGAGTGAAATCTaGCTCAGGATCCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: QEQICSESTKHLRVTLGKKESEI*LRILEA
Trigger: TGCTTCAAGGATCCTGAGCCAGATTTCACTCTCCTT...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp AACTTTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGAGGGTGGAAGGGCTTCTCGGTaGTGTTCTGGTTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: NFDPVPSQLHLFILSPEGGRASR*CSGWCC
Trigger: ACAACACCAACCAGAACACCACCGAGAAGCCCTTCC...ACCCTCTGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAACATAGAATCCAAAGATaGCATACACCCCTCTCGAGA +
Preference number: 4 (lower is better)
Translates to: QEQICSESTKHLRVTLGKHRIQR*HTPLSR
Trigger: TCTCGAGAGGGGTGTATGCCATCTTTGGATTCTATG...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAAGCTTCCATAATCGCTTaGAGGATGGAAAATCCTCGT +
Preference number: 4 (lower is better)
Translates to: QEQICSESTKHLRVTLGKASIIA*RMENPR
Trigger: ACGAGGATTTTCCATCCTCCAAGCGATTATGGAAGC...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAATCATTGTTGACAATCTaGAAACCTGTAATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQSLLTI*KPVMLA
Trigger: AGCCAACATTACAGGTTTCCAGATTGTCAACAATGA...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGATCAGGAGGACTTTGTaGGTCACGAGGTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPIRRTL*VTRFFI
Trigger: AATGAAGAACCTCGTGACCCACAAAGTCCTCCTGAT...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp TCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTGGCTCAGGATATTCCAAATTCATTTaGAGGATCAGGAGGACTTTG +
Preference number: 4 (lower is better)
Translates to: SAIFVSCPTPRRVKSGSGYSKFI*RIRRTL
Trigger: CAAAGTCCTCCTGATCCTCCAAATGAATTTGGAATA...TCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACTATTCCAAATTCATTTaGAGGATCAGGAGGACTTTG +
Preference number: 4 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHYSKFI*RIRRTL
Trigger: CAAAGTCCTCCTGATCCTCCAAATGAATTTGGAATA...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp TCAACTTTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGAGGAAAGTCCACCTATGCTaGTGGTGTTGGGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: STLILSHLSFIFLFYLQRKVHLC*WCWGIL
Trigger: GAGGATTCCCCAACACCATCAGCATAGGTGGACTTT...CCTCTGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAAAGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR TCA 90 bp GTGTGTGTGTGTATTAAAGAACATGGTGTTTATATACTCTGCAGTGGTATCAAACGCCTAAAACGAAGCTaGCAAGAGCATGGGCGCAAC +
Preference number: 4 (lower is better)
Translates to: VCVCIKEHGVYILCSGIKRLKRS*QEHGRN
Trigger: GTTGCGCCCATGCTCTTGTCAGCTTCGTTTTAGGCG...TTTGATACCACTGCAGAGTATATAAACACCATGTTCTTTAATACACACACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTCTTTTCGAGAGCCACTaGCTTTCATTTCATACACAT +
Preference number: 4 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARLFESH*LSFHTH
Trigger: ATGTGTATGAAATGAAAGTCAGTGGCTCTCGAAAAG...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp CCAATGCACGTTATCGATGAGAGCAAACTACTGAACTACAGGAAGCATACGTCGGCTTTGAAAAATCTATaGCTTCTTCACGGACCAATG +
Preference number: 4 (lower is better)
Translates to: PMHVIDESKLLNYRKHTSALKNL*LLHGPM
Trigger: CATTGGTCCGTGAAGAAGTCATAGATTTTTCAAAGC...CGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGCCTGGTTTTGATTTCTaGGGCTTCTTTATCATGATG +
Preference number: 4 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPPGFDF*GFFIMM
Trigger: CATCATGATAAAGAAGCCTCAGAAATCAAAACCAGG...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGCCTGGTTTTGATTTCTaGGGCTTCTTTATCATGATG +
Preference number: 4 (lower is better)
Translates to: RQEQICSESTKHLRVTLGPGFDF*GFFIMM
Trigger: CATCATGATAAAGAAGCCTCAGAAATCAAAACCAGG...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp CCAATGCACGTTATCGATGAGAGCAAACTACTGAACTACAGGAAGCATACGTCGGAATACGCCTGGTTTTaGTTTCTGAGGCTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: PMHVIDESKLLNYRKHTSEYAWF*FLRLLY
Trigger: ATAAAGAAGCCTCAGAAATCAAAACCAGGCGTATTC...CGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGGAATACGCCTGGTTTTaGTTTCTGAGGCTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: RQEQICSESTKHLRVTLGEYAWF*FLRLLY
Trigger: ATAAAGAAGCCTCAGAAATCAAAACCAGGCGTATTC...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp GTACACTTGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTGTTAAAGCGCTGTGCTCCTaGACTGTGTTTCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: VHLKGILSRESRAKHSVVKALCS*TVFLMK
Trigger: TTTCATGAGAAACACAGTGCAGGAGCACAGCGCTTT...AACAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp GTACACTTGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTGTTGTTGTTTTGCACTGCTaGTTCCATAATCGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: VHLKGILSRESRAKHSVVVVLHC*FHNRLE
Trigger: CTCCAAGCGATTATGGAAGCAGCAGTGCAAAACAAC...AACAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp GTACACTTGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTGTTTGCTATGACCAGTATTaGGTCGTGTGTCAATGCAGA +
Preference number: 4 (lower is better)
Translates to: VHLKGILSRESRAKHSVVCYDQY*VVCQCR
Trigger: TCTGCATTGACACACGACGCAATACTGGTCATAGCA...AACAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGGTCATTCCTTGTACTTaGACCATTTTCAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPVIPCT*TIFRAL
Trigger: GAGAGCTCTGAAAATGGTGCAAGTACAAGGAATGAC...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp TCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTGGCTCAGGATGTAAGCAAAGACAATaGACATCCAGATTTCATAAG +
Preference number: 4 (lower is better)
Translates to: SAIFVSCPTPRRVKSGSGCKQRQ*TSRFHK
Trigger: CTTATGAAATCTGGATGTGCATTGTCTTTGCTTACA...TCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp CCAATGCACGTTATCGATGAGAGCAAACTACTGAACTACAGGAAGCATACGTCGAGACAAGAGCAAATATaGAGCGAGTCAACTAAGCAT +
Preference number: 4 (lower is better)
Translates to: PMHVIDESKLLNYRKHTSRQEQI*SESTKH
Trigger: ATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT...CGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGGCAGGCTTAAAGTTTTaGGTGTTCTTTGTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPAGLKF*VFFVSF
Trigger: GAAACTCACAAAGAACACCCAAAACTTTAAGCCTGC...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp CCAATGCACGTTATCGATGAGAGCAAACTACTGAACTACAGGAAGCATACGTCGGCAGGCTTAAAGTTTTaGGTGTTCTTTGTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: PMHVIDESKLLNYRKHTSAGLKF*VFFVSF
Trigger: GAAACTCACAAAGAACACCCAAAACTTTAAGCCTGC...CGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CCTGCAACTTTACAGCTTCACACACCCAGGCTGAACTTCTTTCTTTCTTCTCCCTCTCTAAAATGGGTTTaGGTTCAACCTGCAACTTTA +
Preference number: 4 (lower is better)
Translates to: PATLQLHTPRLNFFLSSPSLKWV*VQPATL
Trigger: TAAAGTTGCAGGTTGAACCCAAACCCATTTTAGAGA...GGGAGAAGAAAGAAAGAAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CCA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGTTAGTGGTGCATTCTTaGCTTCAGGGAATTCCCTTT +
Preference number: 4 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPLVVHS*LQGIPF
Trigger: AAAGGGAATTCCCTGAAGCCAAGAATGCACCACTAA...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACTTTCATACACATCGATaGTATAATTTGTCCTACGTC +
Preference number: 4 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHFHTHR*YNLSYV
Trigger: GACGTAGGACAAATTATACCATCGATGTGTATGAAA...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAATTTCATACACATCGATaGTATAATTTGTCCTACGTC +
Preference number: 4 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQFHTHR*YNLSYV
Trigger: GACGTAGGACAAATTATACCATCGATGTGTATGAAA...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp CCAATGCACGTTATCGATGAGAGCAAACTACTGAACTACAGGAAGCATACGTCGCCTTCCAGTTGCTCATaGTTCTTCTTGTACATTACA +
Preference number: 4 (lower is better)
Translates to: PMHVIDESKLLNYRKHTSPSSCS*FFLYIT
Trigger: TGTAATGTACAAGAAGAACCATGAGCAACTGGAAGG...CGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGCCTTCCAGTTGCTCATaGTTCTTCTTGTACATTACA +
Preference number: 4 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPPSSCS*FFLYIT
Trigger: TGTAATGTACAAGAAGAACCATGAGCAACTGGAAGG...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGCCATATTTTAGTCTCTaGATCCCTTGCACCATATTT +
Preference number: 4 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRPYFSL*IPCTIF
Trigger: AAATATGGTGCAAGGGATCCAGAGACTAAAATATGG...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGGAGGTAATTAGTGAGTaGAGACTATTTCTTCGGACT +
Preference number: 4 (lower is better)
Translates to: RQEQICSESTKHLRVTLGEVISE*RLFLRT
Trigger: AGTCCGAAGAAATAGTCTCCACTCACTAATTACCTC...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp TCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTGGCTCAGGATATAGTACACTTTTCTaGAAACATTTCGTTGGAACG +
Preference number: 4 (lower is better)
Translates to: SAIFVSCPTPRRVKSGSGYSTLF*KHFVGT
Trigger: CGTTCCAACGAAATGTTTCCAGAAAAGTGTACTATA...TCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTATTAAAGAACATGGTGTTTATATACTCTGCAGTGGTATCAAATGCCCCATTTTCTTCTaGCTGGCCATGCTACGCCTA +
Preference number: 4 (lower is better)
Translates to: VCVCIKEHGVYILCSGIKCPIFF*LAMLRL
Trigger: TAGGCGTAGCATGGCCAGGCAGAAGAAAATGGGGCA...TTTGATACCACTGCAGAGTATATAAACACCATGTTCTTTAATACACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp ACTCTCTGTTCCATACACGTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTCCAGGGTCCCATATaGAATTTCAGTCTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: TLCSIHVVAFSVCSIILSVQGPI*NFSLFS
Trigger: GCTAAACAGACTGAAATTGCATATGGGACCCTGGAC...ACTCAGAATTATGCTACATACAGAGAAGGCTACAACGTGTATGGAACAGAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAACGCATACTGGAATCTTaGATGTCCATTTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: QEQICSESTKHLRVTLGKRILES*MSIFVG
Trigger: ACCAACAAAAATGGACATGCAAGATTCCAGTATGCG...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp CCAATGCACGTTATCGATGAGAGCAAACTACTGAACTACAGGAAGCATACGTCGGTTTATGCCCACACATaGAAATTACGCTTTTATAGC +
Preference number: 4 (lower is better)
Translates to: PMHVIDESKLLNYRKHTSVYAHT*KLRFYS
Trigger: GCTATAAAAGCGTAATTTGCATGTGTGGGCATAAAC...CGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp GTACACTTGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTGTTAGGCTCTGTAGTTTATaGCCACACATGCAAATTACG +
Preference number: 4 (lower is better)
Translates to: VHLKGILSRESRAKHSVVRLCSL*PHMQIT
Trigger: CGTAATTTGCATGTGTGGGCATAAACTACAGAGCCT...AACAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTATTAAAGAACATGGTGTTTATATACTCTGCAGTGGTATCAAAAAGCTGACAAGAGCATaGGCGCAACTCAGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: VCVCIKEHGVYILCSGIKKLTRA*AQLRSR
Trigger: ACGACTCCTGAGTTGCGCCCATGCTCTTGTCAGCTT...TTTGATACCACTGCAGAGTATATAAACACCATGTTCTTTAATACACACACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTATTCCAAATTCATTTaGAGGATCAGGAGGACTTTG +
Preference number: 4 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPYSKFI*RIRRTL
Trigger: CAAAGTCCTCCTGATCCTCCAAATGAATTTGGAATA...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CCA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGCTGGAAACATTTCGTTaGAACGATACTTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RQEQICSESTKHLRVTLGLETFR*NDTSSF
Trigger: AAAGGAAGAAGTATCGTTCCAACGAAATGTTTCCAG...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGATCAGTTTTTCCTATTaGAAGGTCATTGCACCATCA +
Preference number: 4 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPISFSY*KVIAPS
Trigger: TGATGGTGCAATGACCTTTCAATAGGAAAAACTGAT...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR TCA 90 bp ACTCTCTGTTCCATACACGTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTTCATTGCTGATTTGCTaGTCTGAGAAAGGCACAAAC +
Preference number: 4 (lower is better)
Translates to: TLCSIHVVAFSVCSIILSSLLIC*SEKGTN
Trigger: GTTTGTGCCTTTCTCAGATCAGCAAATCAGCAATGA...ACTCAGAATTATGCTACATACAGAGAAGGCTACAACGTGTATGGAACAGAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAAGCTCATGAATGGCTTTaGAAAATCTATGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: QEQICSESTKHLRVTLGKAHEWL*KIYDFF
Trigger: GAAGAAGTCATAGATTTTTCAAAGCCATTCATGAGC...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGCTATTGAAAGGTCATTaGACCATCAGCAATATTCGT +
Preference number: 4 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPLLKGH*TISNIR
Trigger: ACGAATATTGCTGATGGTGCAATGACCTTTCAATAG...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp TCAACTTTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGAGGAAAGCGCTGTGCTCCTaGACTGTGTTTCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: STLILSHLSFIFLFYLQRKALCS*TVFLMK
Trigger: TTTCATGAGAAACACAGTGCAGGAGCACAGCGCTTT...CCTCTGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAAAGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR GCA 90 bp TTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGAGGGTAGTTAAAGCGCTGTGCTCCTaGACTGTGTTTCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: LILSHLSFIFLFYLQRVVKALCS*TVFLMK
Trigger: TTTCATGAGAAACACAGTGCAGGAGCACAGCGCTTT...AACTACCCTCTGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR GCA 90 bp GTACACTTGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTGTTTCATTTCCTTCCAGTTaGTCATGGTTCTTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: VHLKGILSRESRAKHSVVSFPSS*SWFFLY
Trigger: GTACAAGAAGAACCATGAGCAACTGGAAGGAAATGA...AACAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTGTAAGCAAAGACAATaGACATCCAGATTTCATAAG +
Preference number: 4 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPCKQRQ*TSRFHK
Trigger: CTTATGAAATCTGGATGTGCATTGTCTTTGCTTACA...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAAGGTGTTTATATACTCTaGAGTGGTATCAAAGAATGG +
Preference number: 4 (lower is better)
Translates to: QEQICSESTKHLRVTLGKGVYIL*SGIKEW
Trigger: CCATTCTTTGATACCACTGCAGAGTATATAAACACC...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp GTACACTTGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTGTTAGACAAGAGCAAATATaGAGCGAGTCAACTAAGCAT +
Preference number: 4 (lower is better)
Translates to: VHLKGILSRESRAKHSVVRQEQI*SESTKH
Trigger: ATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT...AACAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTATTAAAGAACATGGTGTTTATATACTCTGCAGTGGTATCAAAACCCCTCTCGAGAACTaGGAGCAGAAAGCATTTGTC +
Preference number: 4 (lower is better)
Translates to: VCVCIKEHGVYILCSGIKTPLEN*EQKAFV
Trigger: GACAAATGCTTTCTGCTCCCAGTTCTCGAGAGGGGT...TTTGATACCACTGCAGAGTATATAAACACCATGTTCTTTAATACACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp TTCATCAACTTTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAAGAAAAAGAATTCGCTaGCTCTTACACCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: FINFDPVPSQLHLFILSPRKRIR*LLHPLP
Trigger: GGGGAGGGGGTGTAAGAGCCAGCGAATTCTTTTTCT...TGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAAAGTTGATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000611689.4
CDS-3UTR CCA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAACCATATTTTAGTCTCTaGATCCCTTGCACCATATTT +
Preference number: 4 (lower is better)
Translates to: QEQICSESTKHLRVTLGKPYFSL*IPCTIF
Trigger: AAATATGGTGCAAGGGATCCAGAGACTAAAATATGG...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp GTACACTTGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTGTTCAATGTTATAGTGAGTaGAGCAACAGCTATATCAGC +
Preference number: 4 (lower is better)
Translates to: VHLKGILSRESRAKHSVVQCYSE*SNSYIS
Trigger: GCTGATATAGCTGTTGCTCCACTCACTATAACATTG...AACAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp GTACACTTGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTGTTGAGGTAATTAGTGAGTaGAGACTATTTCTTCGGACT +
Preference number: 4 (lower is better)
Translates to: VHLKGILSRESRAKHSVVEVISE*RLFLRT
Trigger: AGTCCGAAGAAATAGTCTCCACTCACTAATTACCTC...AACAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp TTCATCAACTTTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGTCTTCACACCAATCTaGAAGGCGGGTTCATTGGCT +
Preference number: 4 (lower is better)
Translates to: FINFDPVPSQLHLFILSPVFTPI*KAGSLA
Trigger: AGCCAATGAACCCGCCTTCCAGATTGGTGTGAAGAC...TGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAAAGTTGATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616590.4
CDS-3UTR TCA 90 bp ACTCTCTGTTCCATACACGTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTACATTACATATGGTaGTTCCAGAATGGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: TLCSIHVVAFSVCSIILSVHYIW*FQNGSH
Trigger: GTGACTACCATTCTGGAATCACCATATGTAATGTAC...ACTCAGAATTATGCTACATACAGAGAAGGCTACAACGTGTATGGAACAGAGAGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp GTACACTTGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTGTTGCTCATGAATGGCTTTaGAAAATCTATGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: VHLKGILSRESRAKHSVVAHEWL*KIYDFF
Trigger: GAAGAAGTCATAGATTTTTCAAAGCCATTCATGAGC...AACAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTATTAAAGAACATGGTGTTTATATACTCTGCAGTGGTATCAAACTAGAAAAGGACACATaGAGTCCGATGGAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: VCVCIKEHGVYILCSGIKLEKDT*SPMESH
Trigger: ATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAG...TTTGATACCACTGCAGAGTATATAAACACCATGTTCTTTAATACACACACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp TCAACTTTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGAGGCTTCTGTCTCTAAAATaGGTTTGGGTTCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: STLILSHLSFIFLFYLQRLLSLK*VWVQPA
Trigger: TGCAGGTTGAACCCAAACCCATTTTAGAGACAGAAG...CCTCTGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAAAGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CCA 90 bp ACTCTCTGTTCCATACACGTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTCAATGTTATAGTGAGTaGAGCAACAGCTATATCAGC +
Preference number: 4 (lower is better)
Translates to: TLCSIHVVAFSVCSIILSQCYSE*SNSYIS
Trigger: GCTGATATAGCTGTTGCTCCACTCACTATAACATTG...ACTCAGAATTATGCTACATACAGAGAAGGCTACAACGTGTATGGAACAGAGAGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR TCA 90 bp ACTCTCTGTTCCATACACGTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGCTCATGAATGGCTTTaGAAAATCTATGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: TLCSIHVVAFSVCSIILSAHEWL*KIYDFF
Trigger: GAAGAAGTCATAGATTTTTCAAAGCCATTCATGAGC...ACTCAGAATTATGCTACATACAGAGAAGGCTACAACGTGTATGGAACAGAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp GTGTGTGTGTGTATTAAAGAACATGGTGTTTATATACTCTGCAGTGGTATCAAACGAGCTCCTAGTTTTTaGAGTCTGGAAACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: VCVCIKEHGVYILCSGIKRAPSF*SLETSQ
Trigger: TTGGGAAGTTTCCAGACTGCAAAAACTAGGAGCTCG...TTTGATACCACTGCAGAGTATATAAACACCATGTTCTTTAATACACACACACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp ACTCTCTGTTCCATACACGTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTTCATTGTTGACAATCTaGAAACCTGTAATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: TLCSIHVVAFSVCSIILSSLLTI*KPVMLA
Trigger: AGCCAACATTACAGGTTTCCAGATTGTCAACAATGA...ACTCAGAATTATGCTACATACAGAGAAGGCTACAACGTGTATGGAACAGAGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR GCA 90 bp GTGTGTGTGTGTATTAAAGAACATGGTGTTTATATACTCTGCAGTGGTATCAAAAAGTATCGCTTTTCCTaGCTCCTGTCCATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VCVCIKEHGVYILCSGIKKYRFS*LLSISS
Trigger: TGAAGAAATGGACAGGAGGCAGGAAAAGCGATACTT...TTTGATACCACTGCAGAGTATATAAACACCATGTTCTTTAATACACACACACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTATTAAAGAACATGGTGTTTATATACTCTGCAGTGGTATCAAACGCATACTGGAATCTTaGATGTCCATTTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: VCVCIKEHGVYILCSGIKRILES*MSIFVG
Trigger: ACCAACAAAAATGGACATGCAAGATTCCAGTATGCG...TTTGATACCACTGCAGAGTATATAAACACCATGTTCTTTAATACACACACACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTATTAAAGAACATGGTGTTTATATACTCTGCAGTGGTATCAAATATAGTACACTTTTCTaGAAACATTTCGTTGGAACG +
Preference number: 4 (lower is better)
Translates to: VCVCIKEHGVYILCSGIKYSTLF*KHFVGT
Trigger: CGTTCCAACGAAATGTTTCCAGAAAAGTGTACTATA...TTTGATACCACTGCAGAGTATATAAACACCATGTTCTTTAATACACACACACAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTACCTGCTGTCCCGCCTaGCAACGCGGTCCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLTCCPA*QRGPVS
Trigger: GGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGT...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS GCA 90 bp AGCGCCCTTCAAGGCTGGGCGCATCTGGATGACAAACTGCACATCTaGGTCAGTGGGGAAGCTAGGCGTAACAAAGGATGTGTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SALQGWAHLDDKLHI*VSGEARRNKGCVQG
Trigger: GCCCTGCACACATCCTTTGTTACGCCTAGCTTCCCCACTGACGCAGATGTGCAGTTTGTCATCCAGATGCGCCCAGCCTTGAAGGGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479118.1
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS-3UTR CAA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACGCGCTGGTCTTGTCCTaGGAGTCACCGCCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHALVLS*ESPPPL
Trigger: CAGCGGGGGCGGTGACTCCAAGGACAAGACCAGCGC...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622768.5
CDS-3UTR CAA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACCTGCTGTCCCGCCTaGCAACGCGGTCCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHTCCPA*QRGPVS
Trigger: GGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGT...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGCTCAGAGCGCTGGTCTaGTCCTTACTCCCGGAGTCC +
Preference number: 5 (lower is better)
Translates to: GRYAVSYLIAHGAVERSELRALV*SLLPES
Trigger: GGACTCCGGGAGTAAGGACAAGACCAGCGCTCTGAG...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620443.2
CDS TCA 90 bp GCCCATGATCTTTGCAGCACGGCAGAGCTGTCCAATTGTTTTCCCTaGTGCTTCCTGGCCAAGGCAGGTAGTCCCTTTCAGCAGGACAAG +
Preference number: 5 (lower is better)
Translates to: AHDLCSTAELSNCFP*CFLAKAGSPFQQDK
Trigger: CTTGTCCTGCTGAAAGGGACTACCTGCCTTGGCCAGGAAGCATCAGGGAAAACAATTGGACAGCTCTGCCGTGCTGCAAAGATCATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS GCA 90 bp CTCAGAATAGCGCCCTTCAAGGCTGGGCGCATCTGGATGACAAACTaGACATCTGCGTCAGTGGGGAAGCTAGGCGTAACAAAGGATGTG +
Preference number: 5 (lower is better)
Translates to: LRIAPFKAGRIWMTN*TSASVGKLGVTKDV
Trigger: CACATCCTTTGTTACGCCTAGCTTCCCCACTGACGCAGATGTGCAGTTTGTCATCCAGATGCGCCCAGCCTTGAAGGGCGCTATTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479118.1
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS-3UTR CAA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTGTGTTCTGGTTGGTGTaGTATAACTGCACGGCAAAG +
Preference number: 5 (lower is better)
Translates to: QTENCGLNLLSRLATRSCVFWLV*YNCTAK
Trigger: CTTTGCCGTGCAGTTATACAACACCAACCAGAACAC...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAACGCCCGGAGCACGCTTaGCCCCATTTTCTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQRPEHA*PHFLLP
Trigger: AGGCAGAAGAAAATGGGGCAAAGCGTGCTCCGGGCG...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTGATGCGCCTGAATTCTaGGACGTCCTTTATGTTTCC +
Preference number: 5 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLDAPEF*DVLYVS
Trigger: GGAAACATAAAGGACGTCCAAGAATTCAGGCGCATC...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTGCCCGGAGAGTGATCTaGGAGAAATATCACATCCTT +
Preference number: 5 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLARRVI*EKYHIL
Trigger: AAGGATGTGATATTTCTCCAAGATCACTCTCCGGGC...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTaGAAAGGCATACTTAGCAGA +
Preference number: 5 (lower is better)
Translates to: QTENCGLNLLSRLATRSCLRGVH*KGILSR
Trigger: TCTGCTAAGTATGCCTTTCAAGTGTACACCACGGAG...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CCTGCAACTTTACAGCTTCACACACCCAGGCTGAACTTCTTTCTTTCTTCTCCCCGCCCGGAGCACGCTTaGCCCCATTTTCTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: PATLQLHTPRLNFFLSSPRPEHA*PHFLLP
Trigger: AGGCAGAAGAAAATGGGGCAAAGCGTGCTCCGGGCG...GGGAGAAGAAAGAAAGAAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CAA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGCGCCCGGAGCACGCTTaGCCCCATTTTCTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRRPEHA*PHFLLP
Trigger: AGGCAGAAGAAAATGGGGCAAAGCGTGCTCCGGGCG...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGAGGGCACAGCAGGATTaGCTAAGCAGTCTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: GRYAVSYLIAHGAVERSERAQQD*LSSLQH
Trigger: GTGCTGGAGACTGCTTAGCAAATCCTGCTGTGCCCT...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTTCACGAGGTTCTTCATaGTTGTCTTCCAAGTGCCAT +
Preference number: 5 (lower is better)
Translates to: QTENCGLNLLSRLATRSCSRGSS*LSSKCH
Trigger: ATGGCACTTGGAAGACAACAATGAAGAACCTCGTGA...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTTATGCAGTTAGTTACTaGATAGCCCATGGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: QTENCGLNLLSRLATRSCYAVSY*IAHGAV
Trigger: CACTGCTCCATGGGCTATCAAGTAACTAACTGCATA...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS GCA 90 bp AAATGGAAGGGCTTCTCGGTGGTGTTCTGGTTGGTGTTGTATAACTaGACGGCAAAGCGGAAAGCGCTGTGCTCCTGCACTGTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: KWKGFSVVFWLVLYN*TAKRKALCSCTVFL
Trigger: GAGAAACACAGTGCAGGAGCACAGCGCTTTCCGCTTTGCCGTGCAGTTATACAACACCAACCAGAACACCACCGAGAAGCCCTTCCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000479118.1
ENST00000611689.4
ENST00000616590.4
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS-3UTR CAA 90 bp TGGGTTCAACCTGCAACTTTACAGCTTCACACACCCAGGCTGAACTTCTTTCTTCGCCCGGAGCACGCTTaGCCCCATTTTCTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: WVQPATLQLHTPRLNFFLRPEHA*PHFLLP
Trigger: AGGCAGAAGAAAATGGGGCAAAGCGTGCTCCGGGCG...AAGAAAGAAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGGTTGAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CAA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGAGGATCAGGAGGACTTaGTGGGTCACGAGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: QWSDLRESIERLLQARIWRIRRT*WVTRFF
Trigger: GAAGAACCTCGTGACCCACAAAGTCCTCCTGATCCT...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGCTCAGAGCGCTGGTCTaGTCCTTACTCCCGGAGTCC +
Preference number: 5 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPLRALV*SLLPES
Trigger: GGACTCCGGGAGTAAGGACAAGACCAGCGCTCTGAG...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGCTCAGAGCGCTGGTCTaGTCCTTGGAGTCACCGCCC +
Preference number: 5 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPLRALV*SLESPP
Trigger: GGGCGGTGACTCCAAGGACAAGACCAGCGCTCTGAG...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622768.5
CDS GCA 90 bp CCGGGACACATCTACTCGCTGCCTCCTCAGGTAGCGGAAAGCTTCTaGTATGACCAGTATTGCGTCGTGTGTCAATGCAGATGTATACTT +
Preference number: 5 (lower is better)
Translates to: PGHIYSLPPQVAESF*YDQYCVVCQCRCIL
Trigger: AAGTATACATCTGCATTGACACACGACGCAATACTGGTCATAGCAGAAGCTTTCCGCTACCTGAGGAGGCAGCGAGTAGATGTGTCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS-3UTR CAA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGGTGAGTTTCATGCGTTaGGACTCTGCCCGTGATTTG +
Preference number: 5 (lower is better)
Translates to: GRYAVSYLIAHGAVERSEVSFMR*DSARDL
Trigger: CAAATCACGGGCAGAGTCCAAACGCATGAAACTCAC...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAACGCCCGGAGCACGCTTaGCCCCATTTTCTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: QEQICSESTKHLRVTLGKRPEHA*PHFLLP
Trigger: AGGCAGAAGAAAATGGGGCAAAGCGTGCTCCGGGCG...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CAGTGGAGCGATCTGAGAGAGTCAATAGAGAGACTGCTCCAAGCAAGGATCTGGTGGAAACCTGTAATGTaGGCTCCCCCATGCATGACT +
Preference number: 5 (lower is better)
Translates to: QWSDLRESIERLLQARIWWKPVM*APPCMT
Trigger: AGTCATGCATGGGGGAGCCAACATTACAGGTTTCCA...CCAGATCCTTGCTTGGAGCAGTCTCTCTATTGACTCTCTCAGATCGCTCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCATCGATGGTATAATTaGTCCTACGTCCATAAGTGT +
Preference number: 5 (lower is better)
Translates to: QTENCGLNLLSRLATRSCHRWYN*SYVHKC
Trigger: ACACTTATGGACGTAGGACAAATTATACCATCGATG...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGGTGTTCTGGTTGGTGTaGTATAACTGCACGGCAAAG +
Preference number: 5 (lower is better)
Translates to: GRYAVSYLIAHGAVERSEVFWLV*YNCTAK
Trigger: CTTTGCCGTGCAGTTATACAACACCAACCAGAACAC...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACTCGGTGGTGTTCTGGTaGGTGTTGTATAACTGCACG +
Preference number: 5 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHSVVFW*VLYNCT
Trigger: CGTGCAGTTATACAACACCAACCAGAACACCACCGA...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAATCGGTGGTGTTCTGGTaGGTGTTGTATAACTGCACG +
Preference number: 5 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQSVVFW*VLYNCT
Trigger: CGTGCAGTTATACAACACCAACCAGAACACCACCGA...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCATGCTTCCATAATCGCTaGGAGGATGGAAAATCCTCG +
Preference number: 5 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVACFHNR*EDGKSS
Trigger: CGAGGATTTTCCATCCTCCAAGCGATTATGGAAGCA...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GGGATCCATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGTGCTTCCATAATCGCTaGGAGGATGGAAAATCCTCG +
Preference number: 5 (lower is better)
Translates to: GIHFRKAPRGILIVPRPLCFHNR*EDGKSS
Trigger: CGAGGATTTTCCATCCTCCAAGCGATTATGGAAGCA...CAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATGGATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCAAGACCTTGCTGTTACTaGCCAGTTGTTTTGCACTGC +
Preference number: 5 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVARPCCY*PVVLHC
Trigger: GCAGTGCAAAACAACTGGCAAGTAACAGCAAGGTCT...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAGGGCACAGCAGGATTaGCTAAGCAGTCTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: RQEQICSESTKHLRVTLGRAQQD*LSSLQH
Trigger: GTGCTGGAGACTGCTTAGCAAATCCTGCTGTGCCCT...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTAGGGCACAGCAGGATTaGCTAAGCAGTCTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARRAQQD*LSSLQH
Trigger: GTGCTGGAGACTGCTTAGCAAATCCTGCTGTGCCCT...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp TCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTCTCCGTGGTGTACACTTTGCTCATGGTTCTTCTaGTACATTACATATGGTGAT +
Preference number: 5 (lower is better)
Translates to: SEPAVPPCNAVLSPWCTLCSWFF*YITYGD
Trigger: ATCACCATATGTAATGTACAAGAAGAACCATGAGCA...AAGTGTACACCACGGAGACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CAGACTGAGAACTGTGGTCTGAACCTGCTGTCCCGCCTTGCAACGCGGTCCTGTATATTCCAAATTCATTaGGAGGATCAGGAGGACTTT +
Preference number: 5 (lower is better)
Translates to: QTENCGLNLLSRLATRSCIFQIH*EDQEDF
Trigger: AAAGTCCTCCTGATCCTCCAAATGAATTTGGAATAT...ACAGGACCGCGTTGCAAGGCGGGACAGCAGGTTCAGACCACAGTTCTCAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACCCGTCTGCTGTTGTTTaGGTAAACACAGATGGCTCC +
Preference number: 5 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHPSAVV*VNTDGS
Trigger: GGAGCCATCTGTGTTTACCAAAACAACAGCAGACGG...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGAAGGCGAACTTTCCCTaGGACTTTCGCACTCGGGCC +
Preference number: 5 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPKANFP*DFRTRA
Trigger: GGCCCGAGTGCGAAAGTCCAAGGGAAAGTTCGCCTT...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGCTCCGTGGTGTACACTaGAAAGGCATACTTAGCAGA +
Preference number: 5 (lower is better)
Translates to: GRYAVSYLIAHGAVERSELRGVH*KGILSR
Trigger: TCTGCTAAGTATGCCTTTCAAGTGTACACCACGGAG...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp ACTCTCTGTTCCATACACGTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGGTTTACAGGCGTTCTaGGAGTCACCGCCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: TLCSIHVVAFSVCSIILSGLQAF*ESPPPL
Trigger: CAGCGGGGGCGGTGACTCCAAGAACGCCTGTAAACC...ACTCAGAATTATGCTACATACAGAGAAGGCTACAACGTGTATGGAACAGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGGTGAGTTTCATGCGTTaGGACTCTGCCCGTGATTTG +
Preference number: 5 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRVSFMR*DSARDL
Trigger: CAAATCACGGGCAGAGTCCAAACGCATGAAACTCAC...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGAGGTCAGGGTGTTCATaGACATCTGGTCATAGAATC +
Preference number: 5 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKRSGCS*TSGHRI
Trigger: GATTCTATGACCAGATGTCAATGAACACCCTGACCT...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp TCCCTCCATGATGCTCACTCAGTTGAGAACTCAAGAAGGGAGGAGGTAGTGCTGCAGCAGGACAAGCATTaGTCACGGAAAAACTATTGG +
Preference number: 5 (lower is better)
Translates to: SLHDAHSVENSRREEVVLQQDKH*SRKNYW
Trigger: CCAATAGTTTTTCCGTGACAAATGCTTGTCCTGCTG...CAGCACTACCTCCTCCCTTCTTGAGTTCTCAACTGAGTGAGCATCATGGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CAA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGTTTAGTGGTGCATTCTaGGCTTCAGGGAATTCCCTT +
Preference number: 5 (lower is better)
Translates to: GRYAVSYLIAHGAVERSEFSGAF*ASGNSL
Trigger: AAGGGAATTCCCTGAAGCCAAGAATGCACCACTAAA...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GGGATCCATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCGAGGTTCTTCATTGTaGTCTTCCAAGTGCCATTCA +
Preference number: 5 (lower is better)
Translates to: GIHFRKAPRGILIVPRPLRGSSL*SSKCHS
Trigger: TGAATGGCACTTGGAAGACAACAATGAAGAACCTCG...CAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATGGATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTAGGATCAGGAGGACTTaGTGGGTCACGAGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARRIRRT*WVTRFF
Trigger: GAAGAACCTCGTGACCCACAAAGTCCTCCTGATCCT...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACGCCCGGAGAGTGATCTaGGAGAAATATCACATCCTT +
Preference number: 5 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHARRVI*EKYHIL
Trigger: AAGGATGTGATATTTCTCCAAGATCACTCTCCGGGC...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp GTACACTTGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTGTTAAGGCGAACTTTCCCTaGGACTTTCGCACTCGGGCC +
Preference number: 5 (lower is better)
Translates to: VHLKGILSRESRAKHSVVKANFP*DFRTRA
Trigger: GGCCCGAGTGCGAAAGTCCAAGGGAAAGTTCGCCTT...AACAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS TCA 90 bp ACACATCTACTCGCTGCCTCCTCAGGTAGCGGAAAGCTTCTGCTATaGCCAGTATTGCGTCGTGTGTCAATGCAGATGTATACTTTAGTG +
Preference number: 5 (lower is better)
Translates to: THLLAASSGSGKLLL*PVLRRVSMQMYTLV
Trigger: CACTAAAGTATACATCTGCATTGACACACGACGCAATACTGGTCATAGCAGAAGCTTTCCGCTACCTGAGGAGGCAGCGAGTAGATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS GCA 90 bp GTTTCCCACAGACCTTGCTGTTACTTGCCAGTTGTTTTGCACTGCTaGTTCCATAATCGCTTGGAGGATGGAAAATCCTCGTTCTGTGTC +
Preference number: 5 (lower is better)
Translates to: VSHRPCCYLPVVLHC*FHNRLEDGKSSFCV
Trigger: GACACAGAACGAGGATTTTCCATCCTCCAAGCGATTATGGAAGCAGCAGTGCAAAACAACTGGCAAGTAACAGCAAGGTCTGTGGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS-3UTR CAA 90 bp CCAATGCACGTTATCGATGAGAGCAAACTACTGAACTACAGGAAGCATACGTCGGTGAGTTTCATGCGTTaGGACTCTGCCCGTGATTTG +
Preference number: 5 (lower is better)
Translates to: PMHVIDESKLLNYRKHTSVSFMR*DSARDL
Trigger: CAAATCACGGGCAGAGTCCAAACGCATGAAACTCAC...CGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GGGATCCATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCCTATTGAAAGGTCATaGCACCATCAGCAATATTCG +
Preference number: 5 (lower is better)
Translates to: GIHFRKAPRGILIVPRPLPIERS*HHQQYS
Trigger: CGAATATTGCTGATGGTGCAATGACCTTTCAATAGG...CAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATGGATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGTGTAGTGATAACCTCTaGAGTGTTTCCCTAGGATCA +
Preference number: 5 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKCSDNL*SVSLGS
Trigger: TGATCCTAGGGAAACACTCAAGAGGTTATCACTACA...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCATGTAGTGATAACCTCTaGAGTGTTTCCCTAGGATCA +
Preference number: 5 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVACSDNL*SVSLGS
Trigger: TGATCCTAGGGAAACACTCAAGAGGTTATCACTACA...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGGTGTTCTGGTTGGTGTaGTATAACTGCACGGCAAAG +
Preference number: 5 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRVFWLV*YNCTAK
Trigger: CTTTGCCGTGCAGTTATACAACACCAACCAGAACAC...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp TTTCTTTCTTCTCCCTCCATGATGCTCACTCAGTTGAGAACTCAAGAAGGGAGGTCGGTGGTGTTCTGGTaGGTGTTGTATAACTGCACG +
Preference number: 5 (lower is better)
Translates to: FLSSPSMMLTQLRTQEGRSVVFW*VLYNCT
Trigger: CGTGCAGTTATACAACACCAACCAGAACACCACCGA...CCTCCCTTCTTGAGTTCTCAACTGAGTGAGCATCATGGAGGGAGAAGAAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CAA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAAAGGTCAGGGTGTTCATaGACATCTGGTCATAGAATC +
Preference number: 5 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQRSGCS*TSGHRI
Trigger: GATTCTATGACCAGATGTCAATGAACACCCTGACCT...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GGGATCCATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGTACTTGCCAGTTGTTTaGCACTGCTGCTTCCATAAT +
Preference number: 5 (lower is better)
Translates to: GIHFRKAPRGILIVPRPLYLPVV*HCCFHN
Trigger: ATTATGGAAGCAGCAGTGCAAAACAACTGGCAAGTA...CAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATGGATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTGCTGTTACTTGCCAGTaGTTTTGCACTGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARAVTCQ*FCTAAS
Trigger: GGAAGCAGCAGTGCAAAACAACTGGCAAGTAACAGC...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGAGACCTTGCTGTTACTaGCCAGTTGTTTTGCACTGC +
Preference number: 5 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRRPCCY*PVVLHC
Trigger: GCAGTGCAAAACAACTGGCAAGTAACAGCAAGGTCT...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTGGAAACCTGTAATGTaGGCTCCCCCATGCATGACT +
Preference number: 5 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPWKPVM*APPCMT
Trigger: AGTCATGCATGGGGGAGCCAACATTACAGGTTTCCA...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACCGAGGTTCTTCATTGTaGTCTTCCAAGTGCCATTCA +
Preference number: 5 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHRGSSL*SSKCHS
Trigger: TGAATGGCACTTGGAAGACAACAATGAAGAACCTCG...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACTCACGAGGTTCTTCATaGTTGTCTTCCAAGTGCCAT +
Preference number: 5 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHSRGSS*LSSKCH
Trigger: ATGGCACTTGGAAGACAACAATGAAGAACCTCGTGA...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGAGGATCAGGAGGACTTaGTGGGTCACGAGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPRIRRT*WVTRFF
Trigger: GAAGAACCTCGTGACCCACAAAGTCCTCCTGATCCT...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CCAATGCACGTTATCGATGAGAGCAAACTACTGAACTACAGGAAGCATACGTCGCCGTCTGCTGTTGTTTaGGTAAACACAGATGGCTCC +
Preference number: 5 (lower is better)
Translates to: PMHVIDESKLLNYRKHTSPSAVV*VNTDGS
Trigger: GGAGCCATCTGTGTTTACCAAAACAACAGCAGACGG...CGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp ACTCTCTGTTCCATACACGTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTAAGGCGAACTTTCCCTaGGACTTTCGCACTCGGGCC +
Preference number: 5 (lower is better)
Translates to: TLCSIHVVAFSVCSIILSKANFP*DFRTRA
Trigger: GGCCCGAGTGCGAAAGTCCAAGGGAAAGTTCGCCTT...ACTCAGAATTATGCTACATACAGAGAAGGCTACAACGTGTATGGAACAGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS TCA 90 bp GGGAATTCCCTTTCATCCAGCCTCACCCAGCGCTGTATGAACTGCTaGACCATAGGGTTTTCATTGTTGACAATCTGGAAACCTGTAATG +
Preference number: 5 (lower is better)
Translates to: GNSLSSSLTQRCMNC*TIGFSLLTIWKPVM
Trigger: CATTACAGGTTTCCAGATTGTCAACAATGAAAACCCTATGGTTCAGCAGTTCATACAGCGCTGGGTGAGGCTGGATGAAAGGGAATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS-3UTR CAA 90 bp TCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTGGCTCAGGACCTATTGAAAGGTCATaGCACCATCAGCAATATTCG +
Preference number: 5 (lower is better)
Translates to: SAIFVSCPTPRRVKSGSGPIERS*HHQQYS
Trigger: CGAATATTGCTGATGGTGCAATGACCTTTCAATAGG...TCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp TGGGTTCAACCTGCAACTTTACAGCTTCACACACCCAGGCTGAACTTCTTTCTTGTGTTCTGGTTGGTGTaGTATAACTGCACGGCAAAG +
Preference number: 5 (lower is better)
Translates to: WVQPATLQLHTPRLNFFLVFWLV*YNCTAK
Trigger: CTTTGCCGTGCAGTTATACAACACCAACCAGAACAC...AAGAAAGAAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGGTTGAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CAA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAATCGGTGGTGTTCTGGTaGGTGTTGTATAACTGCACG +
Preference number: 5 (lower is better)
Translates to: QEQICSESTKHLRVTLGKSVVFW*VLYNCT
Trigger: CGTGCAGTTATACAACACCAACCAGAACACCACCGA...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTGCTTCCATAATCGCTaGGAGGATGGAAAATCCTCG +
Preference number: 5 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPCFHNR*EDGKSS
Trigger: CGAGGATTTTCCATCCTCCAAGCGATTATGGAAGCA...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACTACTTGCCAGTTGTTTaGCACTGCTGCTTCCATAAT +
Preference number: 5 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHYLPVV*HCCFHN
Trigger: ATTATGGAAGCAGCAGTGCAAAACAACTGGCAAGTA...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGGCTGTTACTTGCCAGTaGTTTTGCACTGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPAVTCQ*FCTAAS
Trigger: GGAAGCAGCAGTGCAAAACAACTGGCAAGTAACAGC...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGACCATAGGGTTTTCATaGTTGACAATCTGGAAACCT +
Preference number: 5 (lower is better)
Translates to: GRYAVSYLIAHGAVERSETIGFS*LTIWKP
Trigger: AGGTTTCCAGATTGTCAACAATGAAAACCCTATGGT...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACAGTCATTCCTTGTACTaGCACCATTTTCAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHSHSLY*HHFQSS
Trigger: AGAGCTCTGAAAATGGTGCAAGTACAAGGAATGACT...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACAGTCATTCCTTGTACTaGCACCATTTTCAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHSHSLY*HHFQSS
Trigger: AGAGCTCTGAAAATGGTGCAAGTACAAGGAATGACT...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGATTTCCAGTCATTCCTaGTACTTGCACCATTTTCAG +
Preference number: 5 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKISSHS*YLHHFQ
Trigger: CTGAAAATGGTGCAAGTACAAGGAATGACTGGAAAT...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAACCGTCTGCTGTTGTTTaGGTAAACACAGATGGCTCC +
Preference number: 5 (lower is better)
Translates to: QEQICSESTKHLRVTLGKPSAVV*VNTDGS
Trigger: GGAGCCATCTGTGTTTACCAAAACAACAGCAGACGG...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GGGATCCATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCCAAACTCCCATAGCTaGAAGTTAGTAGCAGAAATT +
Preference number: 5 (lower is better)
Translates to: GIHFRKAPRGILIVPRPLPNSHS*KLVAEI
Trigger: AATTTCTGCTACTAACTTCAAGCTATGGGAGTTTGG...CAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATGGATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp TTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGAGGGTAGTTTGGAAGGCGGGTTCATaGGCTGCAAGCTGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: LILSHLSFIFLFYLQRVVWKAGS*AASWVC
Trigger: GCAAACCCAGCTTGCAGCCAATGAACCCGCCTTCCA...AACTACCCTCTGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616590.4
CDS TCA 90 bp GACCATGAGAGATTGAGAGGCTGCTTGACTGACAGATTGTACACATaGTGGCTAATTCTGGGACTAACGTTGACAAACAGCGCCATGTTA +
Preference number: 5 (lower is better)
Translates to: DHERLRGCLTDRLYT*WLILGLTLTNSAML
Trigger: TAACATGGCGCTGTTTGTCAACGTTAGTCCCAGAATTAGCCATCATGTGTACAATCTGTCAGTCAAGCAGCCTCTCAATCTCTCATGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477389.1
CDS GCA 90 bp TATGTTTCCCACAGACCTTGCTGTTACTTGCCAGTTGTTTTGCACTaGTGCTTCCATAATCGCTTGGAGGATGGAAAATCCTCGTTCTGT +
Preference number: 5 (lower is better)
Translates to: YVSHRPCCYLPVVLH*CFHNRLEDGKSSFC
Trigger: ACAGAACGAGGATTTTCCATCCTCCAAGCGATTATGGAAGCAGCAGTGCAAAACAACTGGCAAGTAACAGCAAGGTCTGTGGGAAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS GCA 90 bp GTGTTAATCCTTTCGACTTCGCAGTCAATCAAGTATCGCTTTTCCTaGCTCCTGTCCATTTCTTCAATGATGCGCCTGAATTCTTGGACG +
Preference number: 5 (lower is better)
Translates to: VLILSTSQSIKYRFS*LLSISSMMRLNSWT
Trigger: CGTCCAAGAATTCAGGCGCATCATTGAAGAAATGGACAGGAGGCAGGAAAAGCGATACTTGATTGACTGCGAAGTCGAAAGGATTAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS-3UTR CAA 90 bp GGCAGGTATGCAGTTAGTTACTTGATAGCCCATGGAGCAGTGGAGCGATCTGAGAATCAGTTTTTCCTATaGAAAGGTCATTGCACCATC +
Preference number: 5 (lower is better)
Translates to: GRYAVSYLIAHGAVERSENQFFL*KGHCTI
Trigger: GATGGTGCAATGACCTTTCAATAGGAAAAACTGATT...CTCAGATCGCTCCACTGCTCCATGGGCTATCAAGTAACTAACTGCATACCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGTGTAGTGATAACCTCTaGAGTGTTTCCCTAGGATCA +
Preference number: 5 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRCSDNL*SVSLGS
Trigger: TGATCCTAGGGAAACACTCAAGAGGTTATCACTACA...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTAGGTCAGGGTGTTCATaGACATCTGGTCATAGAATC +
Preference number: 5 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARRSGCS*TSGHRI
Trigger: GATTCTATGACCAGATGTCAATGAACACCCTGACCT...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp TTTCTTTCTTCTCCCTCCATGATGCTCACTCAGTTGAGAACTCAAGAAGGGAGGCAGCAGGACAAGCATTaGTCACGGAAAAACTATTGG +
Preference number: 5 (lower is better)
Translates to: FLSSPSMMLTQLRTQEGRQQDKH*SRKNYW
Trigger: CCAATAGTTTTTCCGTGACAAATGCTTGTCCTGCTG...CCTCCCTTCTTGAGTTCTCAACTGAGTGAGCATCATGGAGGGAGAAGAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CAA 90 bp CCTGCAACTTTACAGCTTCACACACCCAGGCTGAACTTCTTTCTTTCTTCTCCCGATATTTCATCAACTTaGATCCTGTCCCATCTCAGC +
Preference number: 5 (lower is better)
Translates to: PATLQLHTPRLNFFLSSPDISST*ILSHLS
Trigger: GCTGAGATGGGACAGGATCAAAGTTGATGAAATATC...GGGAGAAGAAAGAAAGAAGTTCAGCCTGGGTGTGTGAAGCTGTAAAGTTGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CAA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGAGACCTTGCTGTTACTaGCCAGTTGTTTTGCACTGC +
Preference number: 5 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPRPCCY*PVVLHC
Trigger: GCAGTGCAAAACAACTGGCAAGTAACAGCAAGGTCT...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGGATGCGCCTGAATTCTaGGACGTCCTTTATGTTTCC +
Preference number: 5 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPDAPEF*DVLYVS
Trigger: GGAAACATAAAGGACGTCCAAGAATTCAGGCGCATC...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp AGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACACAAAGATAGGGTTTTCATTGTaGACAATCTGGAAACCTGTA +
Preference number: 5 (lower is better)
Translates to: RKAPRGILIVPRPLLHTKIGFSL*TIWKPV
Trigger: TACAGGTTTCCAGATTGTCAACAATGAAAACCCTAT...CTTTGTGTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTTTTAGTGGTGCATTCTaGGCTTCAGGGAATTCCCTT +
Preference number: 5 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARFSGAF*ASGNSL
Trigger: AAGGGAATTCCCTGAAGCCAAGAATGCACCACTAAA...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp CATGCCTCCAGTGGGAAGGGATCCCTAGATCTTAACACTCTCTGTTCCATACACATTTCCAGTCATTCCTaGTACTTGCACCATTTTCAG +
Preference number: 5 (lower is better)
Translates to: HASSGKGSLDLNTLCSIHISSHS*YLHHFQ
Trigger: CTGAAAATGGTGCAAGTACAAGGAATGACTGGAAAT...GTGTATGGAACAGAGAGTGTTAAGATCTAGGGATCCCTTCCCACTGGAGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGCGAGGTTCTTCATTGTaGTCTTCCAAGTGCCATTCA +
Preference number: 5 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPRGSSL*SSKCHS
Trigger: TGAATGGCACTTGGAAGACAACAATGAAGAACCTCG...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTCACGAGGTTCTTCATaGTTGTCTTCCAAGTGCCAT +
Preference number: 5 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPSRGSS*LSSKCH
Trigger: ATGGCACTTGGAAGACAACAATGAAGAACCTCGTGA...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp TTGCAAACTAGAAAAGGACACATGCAGTCCGATGGAGAGCCATGGGCGGTAGCACTTAGATGGGCCTCTTaGCTGAATTGGAATTTAAAT +
Preference number: 5 (lower is better)
Translates to: LQTRKGHMQSDGEPWAVALRWAS*LNWNLN
Trigger: ATTTAAATTCCAATTCAGCAAAGAGGCCCATCTAAG...TGCTACCGCCCATGGCTCTCCATCGGACTGCATGTGTCCTTTTCTAGTTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACCACATTTCAGCAACATaGAAAGGAAATAGAGTGCAC +
Preference number: 5 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHHISAT*KGNRVH
Trigger: GTGCACTCTATTTCCTTTCAATGTTGCTGAAATGTG...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAACACATTTCAGCAACATaGAAAGGAAATAGAGTGCAC +
Preference number: 5 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQHISAT*KGNRVH
Trigger: GTGCACTCTATTTCCTTTCAATGTTGCTGAAATGTG...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGATAGTGCCCCGTCCCTaGCTACACACAAAGTCAATT +
Preference number: 5 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPIVPRP*LHTKSI
Trigger: AATTGACTTTGTGTGTAGCAAGGGACGGGGCACTAT...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGTATGCAGTTAGTTACTaGATAGCCCATGGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: RQEQICSESTKHLRVTLGYAVSY*IAHGAV
Trigger: CACTGCTCCATGGGCTATCAAGTAACTAACTGCATA...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAACCAAACTCCCATAGCTaGAAGTTAGTAGCAGAAATT +
Preference number: 5 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQPNSHS*KLVAEI
Trigger: AATTTCTGCTACTAACTTCAAGCTATGGGAGTTTGG...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp TCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTGGCTCAGGAAATCAGTTTTTCCTATaGAAAGGTCATTGCACCATC +
Preference number: 5 (lower is better)
Translates to: SAIFVSCPTPRRVKSGSGNQFFL*KGHCTI
Trigger: GATGGTGCAATGACCTTTCAATAGGAAAAACTGATT...TCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAAGATTTCAATGATGGTTaGCATTGTCGCGAGTCTCAG +
Preference number: 5 (lower is better)
Translates to: QEQICSESTKHLRVTLGKDFNDG*HCRESQ
Trigger: CTGAGACTCGCGACAATGCAAACCATCATTGAAATC...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGTTTAGTGGTGCATTCTaGGCTTCAGGGAATTCCCTT +
Preference number: 5 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPFSGAF*ASGNSL
Trigger: AAGGGAATTCCCTGAAGCCAAGAATGCACCACTAAA...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CCAATGCACGTTATCGATGAGAGCAAACTACTGAACTACAGGAAGCATACGTCGAGTCATTCCTTGTACTaGCACCATTTTCAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: PMHVIDESKLLNYRKHTSSHSLY*HHFQSS
Trigger: AGAGCTCTGAAAATGGTGCAAGTACAAGGAATGACT...CGACGTATGCTTCCTGTAGTTCAGTAGTTTGCTCTCATCGATAACGTGCATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp TCAGCAATATTCGTGTCATGCCCGACACCAAGGAGAGTGAAATCTGGCTCAGGATGCTCATGGTTCTTCTaGTACATTACATATGGTGAT +
Preference number: 5 (lower is better)
Translates to: SAIFVSCPTPRRVKSGSGCSWFF*YITYGD
Trigger: ATCACCATATGTAATGTACAAGAAGAACCATGAGCA...TCCTGAGCCAGATTTCACTCTCCTTGGTGTCGGGCATGACACGAATATTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CATTTTAGGAAAGCACCAAGAGGTATCCTGATAGTGCCCCGTCCCTTGCTACACCCAACGATGGACAATTaGTATTTGATCCTTACATGT +
Preference number: 5 (lower is better)
Translates to: HFRKAPRGILIVPRPLLHPTMDN*YLILTC
Trigger: ACATGTAAGGATCAAATACAAATTGTCCATCGTTGG...GTGTAGCAAGGGACGGGGCACTATCAGGATACCTCTTGGTGCTTTCCTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GTACACTTGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTGTTGCCCGGAGAGTGATCTaGGAGAAATATCACATCCTT +
Preference number: 5 (lower is better)
Translates to: VHLKGILSRESRAKHSVVARRVI*EKYHIL
Trigger: AAGGATGTGATATTTCTCCAAGATCACTCTCCGGGC...AACAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CTGAAATTCCAGGCTCCTTGGAAAGCCCCGGGATCCATTTTAGGAAAGCACCAACTTAGATGGGCCTCTTaGCTGAATTGGAATTTAAAT +
Preference number: 5 (lower is better)
Translates to: LKFQAPWKAPGSILGKHQLRWAS*LNWNLN
Trigger: ATTTAAATTCCAATTCAGCAAAGAGGCCCATCTAAG...TTGGTGCTTTCCTAAAATGGATCCCGGGGCTTTCCAAGGAGCCTGGAATTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGAGCAGGCTTAAAGTTTaGGGTGTTCTTTGTGAGTTT +
Preference number: 5 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPSRLKV*GVLCEF
Trigger: AAACTCACAAAGAACACCCAAAACTTTAAGCCTGCT...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp ACTCTCTGTTCCATACACGTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGATGCGCCTGAATTCTaGGACGTCCTTTATGTTTCC +
Preference number: 5 (lower is better)
Translates to: TLCSIHVVAFSVCSIILSDAPEF*DVLYVS
Trigger: GGAAACATAAAGGACGTCCAAGAATTCAGGCGCATC...ACTCAGAATTATGCTACATACAGAGAAGGCTACAACGTGTATGGAACAGAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGATAGGGTTTTCATTGTaGACAATCTGGAAACCTGTA +
Preference number: 5 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRIGFSL*TIWKPV
Trigger: TACAGGTTTCCAGATTGTCAACAATGAAAACCCTAT...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGACCATAGGGTTTTCATaGTTGACAATCTGGAAACCT +
Preference number: 5 (lower is better)
Translates to: RQEQICSESTKHLRVTLGTIGFS*LTIWKP
Trigger: AGGTTTCCAGATTGTCAACAATGAAAACCCTATGGT...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp AGGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGACCATAGGGTTTTCATaGTTGACAATCTGGAAACCT +
Preference number: 5 (lower is better)
Translates to: RLKVLGVLCEFHAFGLCPTIGFS*LTIWKP
Trigger: AGGTTTCCAGATTGTCAACAATGAAAACCCTATGGT...CGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTCATCGATGGTATAATTaGTCCTACGTCCATAAGTGT +
Preference number: 5 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARHRWYN*SYVHKC
Trigger: ACACTTATGGACGTAGGACAAATTATACCATCGATG...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp GTTGTAGCCTTCTCTGTATGTAGCATAATTCTGAGTGTTGGTGGCAGGAGCAGGCCAACGATGGACAATTaGTATTTGATCCTTACATGT +
Preference number: 5 (lower is better)
Translates to: VVAFSVCSIILSVGGRSRPTMDN*YLILTC
Trigger: ACATGTAAGGATCAAATACAAATTGTCCATCGTTGG...CCTGCTCCTGCCACCAACACTCAGAATTATGCTACATACAGAGAAGGCTACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp AGGTTGGTTGGTTTGTTTTATACAACTTCATGTTCACACAGCGTGAGCTTCCCGATTTCCAGTCATTCCTaGTACTTGCACCATTTTCAG +
Preference number: 5 (lower is better)
Translates to: RLVGLFYTTSCSHSVSFPISSHS*YLHHFQ
Trigger: CTGAAAATGGTGCAAGTACAAGGAATGACTGGAAAT...CGGGAAGCTCACGCTGTGTGAACATGAAGTTGTATAAAACAAACCAACCAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTTGCTCATGGTTCTTCTaGTACATTACATATGGTGAT +
Preference number: 5 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARCSWFF*YITYGD
Trigger: ATCACCATATGTAATGTACAAGAAGAACCATGAGCA...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp GGCTTAAAGTTTTGGGTGTTCTTTGTGAGTTTCATGCGTTTGGACTCTGCCCGTATATTCCAAATTCATTaGGAGGATCAGGAGGACTTT +
Preference number: 5 (lower is better)
Translates to: GLKFWVFFVSFMRLDSARIFQIH*EDQEDF
Trigger: AAAGTCCTCCTGATCCTCCAAATGAATTTGGAATAT...ACGGGCAGAGTCCAAACGCATGAAACTCACAAAGAACACCCAAAACTTTAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620581.4
CDS-3UTR CAA 90 bp AGACAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGATATTCCAAATTCATTaGGAGGATCAGGAGGACTTT +
Preference number: 5 (lower is better)
Translates to: RQEQICSESTKHLRVTLGIFQIH*EDQEDF
Trigger: AAAGTCCTCCTGATCCTCCAAATGAATTTGGAATAT...CCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS TCA 90 bp CCCTTGCACCATATTTCCCGTCACCAACGATGGACAATTTGTATTTaGTCCTTACATGTTTGGCTATTTCATAGGCTAGGTCTACACAAT +
Preference number: 5 (lower is better)
Translates to: PLHHISRHQRWTICI*SLHVWLFHRLGLHN
Trigger: ATTGTGTAGACCTAGCCTATGAAATAGCCAAACATGTAAGGATCAAATACAAATTGTCCATCGTTGGTGACGGGAAATATGGTGCAAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS-3UTR CAA 90 bp GTACACTTGAAAGGCATACTTAGCAGAGAAAGCCGAGCTAAACACAGTGTTGTTAGCAGGCTTAAAGTTTaGGGTGTTCTTTGTGAGTTT +
Preference number: 5 (lower is better)
Translates to: VHLKGILSRESRAKHSVVSRLKV*GVLCEF
Trigger: AAACTCACAAAGAACACCCAAAACTTTAAGCCTGCT...AACAACACTGTGTTTAGCTCGGCTTTCTCTGCTAAGTATGCCTTTCAAGTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTATTAAAGAACATGGTGTTTATATACTCTGCAGTGGTATCAAAGCTGTTACTTGCCAGTaGTTTTGCACTGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: VCVCIKEHGVYILCSGIKAVTCQ*FCTAAS
Trigger: GGAAGCAGCAGTGCAAAACAACTGGCAAGTAACAGC...TTTGATACCACTGCAGAGTATATAAACACCATGTTCTTTAATACACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp CAAGAGCAAATATGCAGCGAGTCAACTAAGCATCTAAGGGTCACACTTGGGAAAATAGGGTTTTCATTGTaGACAATCTGGAAACCTGTA +
Preference number: 5 (lower is better)
Translates to: QEQICSESTKHLRVTLGKIGFSL*TIWKPV
Trigger: TACAGGTTTCCAGATTGTCAACAATGAAAACCCTAT...TTTCCCAAGTGTGACCCTTAGATGCTTAGTTGACTCGCTGCATATTTGCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp TTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGAGGGTAGTTGTCTCTAAAATGGGTTaGGGTTCAACCTGCAACTTT +
Preference number: 5 (lower is better)
Translates to: LILSHLSFIFLFYLQRVVVSKMG*GSTCNF
Trigger: AAAGTTGCAGGTTGAACCCAAACCCATTTTAGAGAC...AACTACCCTCTGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CAA 90 bp TTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGAGGGTAGTTGATATTTCATCAACTTaGATCCTGTCCCATCTCAGC +
Preference number: 5 (lower is better)
Translates to: LILSHLSFIFLFYLQRVVDISST*ILSHLS
Trigger: GCTGAGATGGGACAGGATCAAAGTTGATGAAATATC...AACTACCCTCTGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CAA 90 bp GTGTGTGTGTGTATTAAAGAACATGGTGTTTATATACTCTGCAGTGGTATCAAAGATTTCAATGATGGTTaGCATTGTCGCGAGTCTCAG +
Preference number: 5 (lower is better)
Translates to: VCVCIKEHGVYILCSGIKDFNDG*HCRESQ
Trigger: CTGAGACTCGCGACAATGCAAACCATCATTGAAATC...TTTGATACCACTGCAGAGTATATAAACACCATGTTCTTTAATACACACACACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp TTCATCAACTTTGATCCTGTCCCATCTCAGCTTCATCTTTTTATTTTATCTCCAGTCTCTAAAATGGGTTaGGGTTCAACCTGCAACTTT +
Preference number: 5 (lower is better)
Translates to: FINFDPVPSQLHLFILSPVSKMG*GSTCNF
Trigger: AAAGTTGCAGGTTGAACCCAAACCCATTTTAGAGAC...TGGAGATAAAATAAAAAGATGAAGCTGAGATGGGACAGGATCAAAGTTGATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS-3UTR CAA 90 bp GTGTGTGTGTGTATTAAAGAACATGGTGTTTATATACTCTGCAGTGGTATCAAACATCGATGGTATAATTaGTCCTACGTCCATAAGTGT +
Preference number: 5 (lower is better)
Translates to: VCVCIKEHGVYILCSGIKHRWYN*SYVHKC
Trigger: ACACTTATGGACGTAGGACAAATTATACCATCGATG...TTTGATACCACTGCAGAGTATATAAACACCATGTTCTTTAATACACACACACAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTATTAAAGAACATGGTGTTTATATACTCTGCAGTGGTATCAAACCAACGATGGACAATTaGTATTTGATCCTTACATGT +
Preference number: 5 (lower is better)
Translates to: VCVCIKEHGVYILCSGIKPTMDN*YLILTC
Trigger: ACATGTAAGGATCAAATACAAATTGTCCATCGTTGG...TTTGATACCACTGCAGAGTATATAAACACCATGTTCTTTAATACACACACACAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620443.2
ENST00000622768.5
CDS GCA 72 bp GCGCCCTTCAAGGCTGGGCGCATCTGGATGACAAACTaGACATCTGCGTCAGTGGGGAAGCTAGGCGTAACA +
Preference number: 6 (lower is better)
Translates to: APFKAGRIWMTN*TSASVGKLGVT
Trigger: TGTTACGCCTAGCTTCCCCACTGACGCAGATGTGCAGTTTGTCATCCAGATGCGCCCAGCCTTGAAGGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479118.1
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS GCA 72 bp CCCAGGACTAAAAAGAAGACCGCCCGGAGCACGCTTTaGCCCATTTTCTTCTGCCTGGCCATGCTACGCCTA +
Preference number: 6 (lower is better)
Translates to: PRTKKKTARSTL*PIFFCLAMLRL
Trigger: TAGGCGTAGCATGGCCAGGCAGAAGAAAATGGGGCAAAGCGTGCTCCGGGCGGTCTTCTTTTTAGTCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000611689.4
ENST00000616590.4
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CCA 72 bp TCATGGTTGACTCCAGCAGGAAGGCGAACTTTCCCTTaGACTTTCGCACTCGGGCCACTCCGTCTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: SWLTPAGRRTFP*TFALGPLRLLL
Trigger: CAACAGCAGACGGAGTGGCCCGAGTGCGAAAGTCCAAGGGAAAGTTCGCCTTCCTGCTGGAGTCAACCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS GCA 72 bp GGCTTCTCGGTGGTGTTCTGGTTGGTGTTGTATAACTaGACGGCAAAGCGGAAAGCGCTGTGCTCCTGCACT +
Preference number: 6 (lower is better)
Translates to: GFSVVFWLVLYN*TAKRKALCSCT
Trigger: AGTGCAGGAGCACAGCGCTTTCCGCTTTGCCGTGCAGTTATACAACACCAACCAGAACACCACCGAGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000479118.1
ENST00000611689.4
ENST00000616590.4
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CCA 72 bp AGACTCAGAATAGCGCCCTTCAAGGCTGGGCGCATCTaGATGACAAACTGCACATCTGCGTCAGTGGGGAAG +
Preference number: 6 (lower is better)
Translates to: RLRIAPFKAGRI*MTNCTSASVGK
Trigger: CTTCCCCACTGACGCAGATGTGCAGTTTGTCATCCAGATGCGCCCAGCCTTGAAGGGCGCTATTCTGAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479118.1
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CCA 72 bp CGGCAGAGCTGTCCAATTGTTTTCCCTGATGCTTCCTaGCCAAGGCAGGTAGTCCCTTTCAGCAGGACAAGC +
Preference number: 6 (lower is better)
Translates to: RQSCPIVFPDAS*PRQVVPFSRTS
Trigger: GCTTGTCCTGCTGAAAGGGACTACCTGCCTTGGCCAGGAAGCATCAGGGAAAACAATTGGACAGCTCTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS TCA 72 bp CTTTGCAGCACGGCAGAGCTGTCCAATTGTTTTCCCTaGTGCTTCCTGGCCAAGGCAGGTAGTCCCTTTCAG +
Preference number: 6 (lower is better)
Translates to: LCSTAELSNCFP*CFLAKAGSPFQ
Trigger: CTGAAAGGGACTACCTGCCTTGGCCAGGAAGCATCAGGGAAAACAATTGGACAGCTCTGCCGTGCTGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS GCA 72 bp CAAGGCTGGGCGCATCTGGATGACAAACTGCACATCTaGGTCAGTGGGGAAGCTAGGCGTAACAAAGGATGT +
Preference number: 6 (lower is better)
Translates to: QGWAHLDDKLHI*VSGEARRNKGC
Trigger: ACATCCTTTGTTACGCCTAGCTTCCCCACTGACGCAGATGTGCAGTTTGTCATCCAGATGCGCCCAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479118.1
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS TCA 72 bp GCCCCACCTGGTGAACATTTTAGGTGCAGCAGCCCATaGTCTTTGCAGCACGGCAGAGCTGTCCAATTGTTT +
Preference number: 6 (lower is better)
Translates to: APPGEHFRCSSP*SLQHGRAVQLF
Trigger: AAACAATTGGACAGCTCTGCCGTGCTGCAAAGATCATGGGCTGCTGCACCTAAAATGTTCACCAGGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS CAA 72 bp AAATGGAAGGGCTTCTCGGTGGTGTTCTGGTTGGTGTaGTATAACTGCACGGCAAAGCGGAAAGCGCTGTGC +
Preference number: 6 (lower is better)
Translates to: KWKGFSVVFWLV*YNCTAKRKALC
Trigger: GCACAGCGCTTTCCGCTTTGCCGTGCAGTTATACAACACCAACCAGAACACCACCGAGAAGCCCTTCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000479118.1
ENST00000611689.4
ENST00000616590.4
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS TCA 72 bp CTCGCTGCCTCCTCAGGTAGCGGAAAGCTTCTGCTATaGCCAGTATTGCGTCGTGTGTCAATGCAGATGTAT +
Preference number: 6 (lower is better)
Translates to: LAASSGSGKLLL*PVLRRVSMQMY
Trigger: ATACATCTGCATTGACACACGACGCAATACTGGTCATAGCAGAAGCTTTCCGCTACCTGAGGAGGCAGCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CCA 72 bp CCTAAAACGAAGCTCACTTCTGTCTTCACACCAATCTaGAAGGCGGGTTCATTGGCTGCAAGCTGGGTTTGC +
Preference number: 6 (lower is better)
Translates to: PKTKLTSVFTPI*KAGSLAASWVC
Trigger: GCAAACCCAGCTTGCAGCCAATGAACCCGCCTTCCAGATTGGTGTGAAGACAGAAGTGAGCTTCGTTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616590.4
CDS GCA 72 bp GTGTTGTATAACTGCACGGCAAAGCGGAAAGCGCTGTaGTCCTGCACTGTGTTTCTCATGAAAAGTCCACCT +
Preference number: 6 (lower is better)
Translates to: VLYNCTAKRKAL*SCTVFLMKSPP
Trigger: AGGTGGACTTTTCATGAGAAACACAGTGCAGGAGCACAGCGCTTTCCGCTTTGCCGTGCAGTTATACAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000479118.1
ENST00000611689.4
ENST00000616590.4
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CCA 72 bp AATTCAAATGGAAGGGCTTCTCGGTGGTGTTCTGGTTaGTGTTGTATAACTGCACGGCAAAGCGGAAAGCGC +
Preference number: 6 (lower is better)
Translates to: NSNGRASRWCSG*CCITARQSGKR
Trigger: GCGCTTTCCGCTTTGCCGTGCAGTTATACAACACCAACCAGAACACCACCGAGAAGCCCTTCCATTTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000479118.1
ENST00000611689.4
ENST00000616590.4
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CAA 72 bp GTTTCCCACAGACCTTGCTGTTACTTGCCAGTTGTTTaGCACTGCTGCTTCCATAATCGCTTGGAGGATGGA +
Preference number: 6 (lower is better)
Translates to: VSHRPCCYLPVV*HCCFHNRLEDG
Trigger: TCCATCCTCCAAGCGATTATGGAAGCAGCAGTGCAAAACAACTGGCAAGTAACAGCAAGGTCTGTGGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CAA 90 bp GTCCTTTATGTTTCCCACAGACCTTGCTGTTACTTGCCAGTTGTTTaGCACTGCTGCTTCCATAATCGCTTGGAGGATGGAAAATCCTCG +
Preference number: 6 (lower is better)
Translates to: VLYVSHRPCCYLPVV*HCCFHNRLEDGKSS
Trigger: CGAGGATTTTCCATCCTCCAAGCGATTATGGAAGCAGCAGTGCAAAACAACTGGCAAGTAACAGCAAGGTCTGTGGGAAACATAAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CAA 90 bp CTTTTCCTGCCTCCTGTCCATTTCTTCAATGATGCGCCTGAATTCTaGGACGTCCTTTATGTTTCCCACAGACCTTGCTGTTACTTGCCA +
Preference number: 6 (lower is better)
Translates to: LFLPPVHFFNDAPEF*DVLYVSHRPCCYLP
Trigger: TGGCAAGTAACAGCAAGGTCTGTGGGAAACATAAAGGACGTCCAAGAATTCAGGCGCATCATTGAAGAAATGGACAGGAGGCAGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS GCA 72 bp AGACCTTGCTGTTACTTGCCAGTTGTTTTGCACTGCTaGTTCCATAATCGCTTGGAGGATGGAAAATCCTCG +
Preference number: 6 (lower is better)
Translates to: RPCCYLPVVLHC*FHNRLEDGKSS
Trigger: CGAGGATTTTCCATCCTCCAAGCGATTATGGAAGCAGCAGTGCAAAACAACTGGCAAGTAACAGCAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS GCA 72 bp CACAGACCTTGCTGTTACTTGCCAGTTGTTTTGCACTaGTGCTTCCATAATCGCTTGGAGGATGGAAAATCC +
Preference number: 6 (lower is better)
Translates to: HRPCCYLPVVLH*CFHNRLEDGKS
Trigger: GGATTTTCCATCCTCCAAGCGATTATGGAAGCAGCAGTGCAAAACAACTGGCAAGTAACAGCAAGGTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CCA 72 bp GATCTACGTGGTAATTCAAATGGAAGGGCTTCTCGGTaGTGTTCTGGTTGGTGTTGTATAACTGCACGGCAA +
Preference number: 6 (lower is better)
Translates to: DLRGNSNGRASR*CSGWCCITARQ
Trigger: TTGCCGTGCAGTTATACAACACCAACCAGAACACCACCGAGAAGCCCTTCCATTTGAATTACCACGTAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000479118.1
ENST00000611689.4
ENST00000616590.4
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CCA 72 bp GGCCATGCTACGCCTAAAACGAAGCTGACAAGAGCATaGGCGCAACTCAGGAGTCGTCAAAATAATAATAGA +
Preference number: 6 (lower is better)
Translates to: GHATPKTKLTRA*AQLRSRQNNNR
Trigger: TCTATTATTATTTTGACGACTCCTGAGTTGCGCCCATGCTCTTGTCAGCTTCGTTTTAGGCGTAGCATGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611689.4
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CCA 72 bp AAGTTCCCCAACCATGCCGTTCCATATTTTAGTCTCTaGATCCCTTGCACCATATTTCCCGTCACCAACGAT +
Preference number: 6 (lower is better)
Translates to: KFPNHAVPYFSL*IPCTIFPVTND
Trigger: ATCGTTGGTGACGGGAAATATGGTGCAAGGGATCCAGAGACTAAAATATGGAACGGCATGGTTGGGGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CAA 72 bp CCTCCTGTCCATTTCTTCAATGATGCGCCTGAATTCTaGGACGTCCTTTATGTTTCCCACAGACCTTGCTGT +
Preference number: 6 (lower is better)
Translates to: PPVHFFNDAPEF*DVLYVSHRPCC
Trigger: ACAGCAAGGTCTGTGGGAAACATAAAGGACGTCCAAGAATTCAGGCGCATCATTGAAGAAATGGACAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CAA 90 bp TGGACGTCCTTTATGTTTCCCACAGACCTTGCTGTTACTTGCCAGTaGTTTTGCACTGCTGCTTCCATAATCGCTTGGAGGATGGAAAAT +
Preference number: 6 (lower is better)
Translates to: WTSFMFPTDLAVTCQ*FCTAASIIAWRMEN
Trigger: ATTTTCCATCCTCCAAGCGATTATGGAAGCAGCAGTGCAAAACAACTGGCAAGTAACAGCAAGGTCTGTGGGAAACATAAAGGACGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS TCA 72 bp CTTTCATCCAGCCTCACCCAGCGCTGTATGAACTGCTaGACCATAGGGTTTTCATTGTTGACAATCTGGAAA +
Preference number: 6 (lower is better)
Translates to: LSSSLTQRCMNC*TIGFSLLTIWK
Trigger: TTTCCAGATTGTCAACAATGAAAACCCTATGGTTCAGCAGTTCATACAGCGCTGGGTGAGGCTGGATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS GCA 72 bp CTTTCGACTTCGCAGTCAATCAAGTATCGCTTTTCCTaGCTCCTGTCCATTTCTTCAATGATGCGCCTGAAT +
Preference number: 6 (lower is better)
Translates to: LSTSQSIKYRFS*LLSISSMMRLN
Trigger: ATTCAGGCGCATCATTGAAGAAATGGACAGGAGGCAGGAAAAGCGATACTTGATTGACTGCGAAGTCGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CCA 72 bp CTCCTGTCCATTTCTTCAATGATGCGCCTGAATTCTTaGACGTCCTTTATGTTTCCCACAGACCTTGCTGTT +
Preference number: 6 (lower is better)
Translates to: LLSISSMMRLNS*TSFMFPTDLAV
Trigger: AACAGCAAGGTCTGTGGGAAACATAAAGGACGTCCAAGAATTCAGGCGCATCATTGAAGAAATGGACAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CAA 72 bp TTGCCAGTTGTTTTGCACTGCTGCTTCCATAATCGCTaGGAGGATGGAAAATCCTCGTTCTGTGTCATAGAG +
Preference number: 6 (lower is better)
Translates to: LPVVLHCCFHNR*EDGKSSFCVIE
Trigger: CTCTATGACACAGAACGAGGATTTTCCATCCTCCAAGCGATTATGGAAGCAGCAGTGCAAAACAACTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS TCA 72 bp CTATGGTCCGATTCTCTGAGGATGCACTGTCATTGCTaGTTTGCTGATCTGAGAAAGGCACAAACCTTTCAT +
Preference number: 6 (lower is better)
Translates to: LWSDSLRMHCHC*FADLRKAQTFH
Trigger: ATGAAAGGTTTGTGCCTTTCTCAGATCAGCAAATCAGCAATGACAGTGCATCCTCAGAGAATCGGACCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS TCA 72 bp GTCTGCTGTTGTTTTGGTAAACACAGATGGCTCCGCTaGTTTCATGTAAGACCACATTTTCTCGTACACAGC +
Preference number: 6 (lower is better)
Translates to: VCCCFGKHRWLR*FHVRPHFLVHS
Trigger: GCTGTGTACGAGAAAATGTGGTCTTACATGAAATCAGCGGAGCCATCTGTGTTTACCAAAACAACAGCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CAA 90 bp GGATTGTTACCAGGGGAAGTTCCATGTAAATGTACAAAGATGTCTTaGCCAGATAGAGCTCAGTATCAAAGGGAACAGGTTAGCGAGCAT +
Preference number: 6 (lower is better)
Translates to: GLLPGEVPCKCTKMS*PDRAQYQREQVSEH
Trigger: ATGCTCGCTAACCTGTTCCCTTTGATACTGAGCTCTATCTGGCAAAGACATCTTTGTACATTTACATGGAACTTCCCCTGGTAACAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477389.1
CDS CCA 72 bp ATCTATGACTTCTTCACGGACCAATGTTATAGTGAGTaGAGCAACAGCTATATCAGCTCTCCCATAGACAAG +
Preference number: 6 (lower is better)
Translates to: IYDFFTDQCYSE*SNSYISSPIDK
Trigger: CTTGTCTATGGGAGAGCTGATATAGCTGTTGCTCCACTCACTATAACATTGGTCCGTGAAGAAGTCATAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CCA 72 bp TATTCCAAATTCATTTGGAGGATCAGGAGGACTTTGTaGGTCACGAGGTTCTTCATTGTTGTCTTCCAAGTG +
Preference number: 6 (lower is better)
Translates to: YSKFIWRIRRTL*VTRFFIVVFQV
Trigger: CACTTGGAAGACAACAATGAAGAACCTCGTGACCCACAAAGTCCTCCTGATCCTCCAAATGAATTTGGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CAA 72 bp CCAGGGGAAGTTCCATGTAAATGTACAAAGATGTCTTaGCCAGATAGAGCTCAGTATCAAAGGGAACAGGTT +
Preference number: 6 (lower is better)
Translates to: PGEVPCKCTKMS*PDRAQYQREQV
Trigger: AACCTGTTCCCTTTGATACTGAGCTCTATCTGGCAAAGACATCTTTGTACATTTACATGGAACTTCCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477389.1
CDS CAA 72 bp TTTCTGCAGCTCATTGTCCACTCTGAAATGTACATCTaGACCTCTGAGAGGTCTTCGTTAAAGCATTCATGG +
Preference number: 6 (lower is better)
Translates to: FLQLIVHSEMYI*TSERSSLKHSW
Trigger: CCATGAATGCTTTAACGAAGACCTCTCAGAGGTCAAGATGTACATTTCAGAGTGGACAATGAGCTGCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477389.1
CDS TCA 72 bp CATACTCATTCCAGTAGCCAGCTTTTCGAGAGCCACTaGCTTTCATTTCATACACATCGATGGTATAATTTG +
Preference number: 6 (lower is better)
Translates to: HTHSSSQLFESH*LSFHTHRWYNL
Trigger: CAAATTATACCATCGATGTGTATGAAATGAAAGTCAGTGGCTCTCGAAAAGCTGGCTACTGGAATGAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CCA 72 bp ACTGGGAGCAGAAAGCATTTGTCACGGAAAAACTATTaGAGGAATCCAAGTGATCTACGTGGTAATTCAAAT +
Preference number: 6 (lower is better)
Translates to: TGSRKHLSRKNY*RNPSDLRGNSN
Trigger: ATTTGAATTACCACGTAGATCACTTGGATTCCTCCAATAGTTTTTCCGTGACAAATGCTTTCTGCTCCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479118.1
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CAA 72 bp AAATATTCCAAATTCATTTGGAGGATCAGGAGGACTTaGTGGGTCACGAGGTTCTTCATTGTTGTCTTCCAA +
Preference number: 6 (lower is better)
Translates to: KYSKFIWRIRRT*WVTRFFIVVFQ
Trigger: TTGGAAGACAACAATGAAGAACCTCGTGACCCACAAAGTCCTCCTGATCCTCCAAATGAATTTGGAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620443.2
ENST00000620581.4
ENST00000622768.5
CDS CCA 72 bp TTTCAGCAGGACAAGCATTTGTCACGGAAAAACTATTaGAGGAATCCAAGTGATCTACGTGGTAATTCAAAT +
Preference number: 6 (lower is better)
Translates to: FQQDKHLSRKNY*RNPSDLRGNSN
Trigger: ATTTGAATTACCACGTAGATCACTTGGATTCCTCCAATAGTTTTTCCGTGACAAATGCTTGTCCTGCTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611689.4
ENST00000616590.4
CDS CAA 72 bp GCATTCATGGAATATCCAAGTCTTCTCACTTTAGGATaGTTACCAGGGGAAGTTCCATGTAAATGTACAAAG +
Preference number: 6 (lower is better)
Translates to: AFMEYPSLLTLG*LPGEVPCKCTK
Trigger: CTTTGTACATTTACATGGAACTTCCCCTGGTAACAATCCTAAAGTGAGAAGACTTGGATATTCCATGAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477389.1
CDS CAA 90 bp TTCGTTAAAGCATTCATGGAATATCCAAGTCTTCTCACTTTAGGATaGTTACCAGGGGAAGTTCCATGTAAATGTACAAAGATGTCTTTG +
Preference number: 6 (lower is better)
Translates to: FVKAFMEYPSLLTLG*LPGEVPCKCTKMSL
Trigger: CAAAGACATCTTTGTACATTTACATGGAACTTCCCCTGGTAACAATCCTAAAGTGAGAAGACTTGGATATTCCATGAATGCTTTAACGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477389.1