RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRIA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000155511

Ensembl transcript IDs: ENST00000285900.10, ENST00000340592.9, ENST00000448073.8, ENST00000474198.1, ENST00000481559.6, ENST00000492291.1, ENST00000517469.1, ENST00000518142.5, ENST00000518783.1, ENST00000518862.5, ENST00000520353.5, ENST00000520966.1, ENST00000521843.6

Found 635 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGGCAGCCCACTTCTCCAACAATGTCTATCTCCATCAGAGGTTTaGGCCAAGGAGTGGAGGGTAACATGGAGAGCCCCCATGGAGAAT +
Preference number: 1 (lower is better)
Translates to: EGSPLLQQCLSPSEV*AKEWRVTWRAPMEN
Trigger: ATTCTCCATGGGGGCTCTCCATGTTACCCTCCACTCCTTGGCCCAAACCTCTGATGGAGATAGACATTGTTGGAGAAGTGGGCTGCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR CCA 90 bp ATGGGCAATATCTCCCTGGCTGTTATCTCTTCCCAAAATTCTGCTTaGTTTAGGAGGCCAAGTGCCTTCAGCCACCAGACTGCCGTTGAG +
Preference number: 1 (lower is better)
Translates to: MGNISLAVISSQNSA*FRRPSAFSHQTAVE
Trigger: CTCAACGGCAGTCTGGTGGCTGAAGGCACTTGGCCTCCTAAACCAAGCAGAATTTTGGGAAGAGATAACAGCCAGGGAGATATTGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR GCA 90 bp AATCATGCACCTAGGAGAGTGACTGCTGGAGAGCTGGAAGCCAGTTaGACCAAGAATGAGAGTTGGGATCTCCAAGAAAGCTATATGTCA +
Preference number: 1 (lower is better)
Translates to: NHAPRRVTAGELEAS*TKNESWDLQESYMS
Trigger: TGACATATAGCTTTCTTGGAGATCCCAACTCTCATTCTTGGTGCAACTGGCTTCCAGCTCTCCAGCAGTCACTCTCCTAGGTGCATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR TCA 90 bp CTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAAAGCTaGACTCAGCCTGGGCTTCTCTCTATAAACCCTGCCACTTCACCA +
Preference number: 1 (lower is better)
Translates to: LQESYMSGILTSNKS*TQPGLLSINPATSP
Trigger: TGGTGAAGTGGCAGGGTTTATAGAGAGAAGCCCAGGCTGAGTTCAGCTTTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR CCA 90 bp AGGGAACAAGCCAGAATATGGTTATCAGTAAAAGCTAATGACACATaGCACGCACTGAATCATGCACCTAGGAGAGTGACTGCTGGAGAG +
Preference number: 1 (lower is better)
Translates to: REQARIWLSVKANDT*HALNHAPRRVTAGE
Trigger: CTCTCCAGCAGTCACTCTCCTAGGTGCATGATTCAGTGCGTGCCATGTGTCATTAGCTTTTACTGATAACCATATTCTGGCTTGTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR TCA 90 bp CTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGAAAAAGTaGGAATCATGGGCAATATCTCCCTGGCTGTTATCTCTTCCCAAA +
Preference number: 1 (lower is better)
Translates to: LLHNGFLLRCQAKKK*ESWAISPWLLSLPK
Trigger: TTTGGGAAGAGATAACAGCCAGGGAGATATTGCCCATGATTCTCACTTTTTCTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR CCA 90 bp CAATCATACGTATATTGGAATACAACGTCCTCATGCTATCTTAGCTaGGGGAAGGTCAGCCTCTTTGAGTTAGAACCTGGGATCAAAGGT +
Preference number: 1 (lower is better)
Translates to: QSYVYWNTTSSCYLS*GKVSLFELEPGIKG
Trigger: ACCTTTGATCCCAGGTTCTAACTCAAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATTCCAATATACGTATGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR CCA 90 bp CTATATGTCAGGGATTCTCACTTCCAACAAAAGCTGAACTCAGCCTaGGCTTCTCTCTATAAACCCTGCCACTTCACCAATCTTGCTTTA +
Preference number: 1 (lower is better)
Translates to: LYVRDSHFQQKLNSA*ASLYKPCHFTNLAL
Trigger: TAAAGCAAGATTGGTGAAGTGGCAGGGTTTATAGAGAGAAGCCCAGGCTGAGTTCAGCTTTTGTTGGAAGTGAGAATCCCTGACATATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR CCA 90 bp ACAAGTCTCTTTTTATCCGCTCATGTTACTTGTGGGCTCAGTAGCTaGAGAGGCATCTTACTAGGCCAAAGGCAAAAAGTCTTTGAAGCA +
Preference number: 1 (lower is better)
Translates to: TSLFLSAHVTCGLSS*RGILLGQRQKVFEA
Trigger: TGCTTCAAAGACTTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAACATGAGCGGATAAAAAGAGACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR CAA 90 bp CTGCTTGGTTTAGGAGGCCAAGTGCCTTCAGCCACCAGACTGCCGTaGAGCCTGAGCACACCAGGAGGACATACTTCTCAGGGCCAAGGT +
Preference number: 2 (lower is better)
Translates to: LLGLGGQVPSATRLP*SLSTPGGHTSQGQG
Trigger: ACCTTGGCCCTGAGAAGTATGTCCTCCTGGTGTGCTCAGGCTCAACGGCAGTCTGGTGGCTGAAGGCACTTGGCCTCCTAAACCAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGGTTTGGGATGGGGCTaGGGAGCCCGAGCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPGLGWG*GARACS
Trigger: GGAGCAGGCTCGGGCTCCCCAGCCCCATCCCAAACC...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
3UTR-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCGGTTTGGGATGGGGCTaGGGAGCCCGAGCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPGLGWG*GARACS
Trigger: GGAGCAGGCTCGGGCTCCCCAGCCCCATCCCAAACC...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
3UTR CAA 90 bp GGAAGGCAGCCCACTTCTCCAACAATGTCTATCTCCATCAGAGGTTaGGGCCAAGGAGTGGAGGGTAACATGGAGAGCCCCCATGGAGAA +
Preference number: 2 (lower is better)
Translates to: GRQPTSPTMSISIRG*GQGVEGNMESPHGE
Trigger: TTCTCCATGGGGGCTCTCCATGTTACCCTCCACTCCTTGGCCCAAACCTCTGATGGAGATAGACATTGTTGGAGAAGTGGGCTGCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTGGTTTGGGATGGGGCTaGGGAGCCCGAGCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSGLGWG*GARACS
Trigger: GGAGCAGGCTCGGGCTCCCCAGCCCCATCCCAAACC...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
3UTR-3UTR TCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGCCACCACCCTCATCCTaGGTTGCTTTTCACCTGTGT +
Preference number: 2 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQPPPSS*VAFHLC
Trigger: ACACAGGTGAAAAGCAACTCAGGATGAGGGTGGTGG...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp GTTGATGTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGTTTGGGATGGGGCTaGGGAGCCCGAGCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: VDVKGLFPTLPRCRLPNGGLGWG*GARACS
Trigger: GGAGCAGGCTCGGGCTCCCCAGCCCCATCCCAAACC...ACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAACATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAAGTTTGGGCCAAGGAGTaGAGGGTAACATGGAGAGCC +
Preference number: 2 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKVWAKE*RVTWRA
Trigger: GGCTCTCCATGTTACCCTCCACTCCTTGGCCCAAAC...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR TCA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAACCACCACCCTCATCCTaGGTTGCTTTTCACCTGTGT +
Preference number: 2 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKPPPSS*VAFHLC
Trigger: ACACAGGTGAAAAGCAACTCAGGATGAGGGTGGTGG...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTCTTGTGGTCGCAGTaGTTGGTGGTGGTTGCGTTT +
Preference number: 2 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPFLWSQ*LVVVAF
Trigger: AAACGCAACCACCACCAACCACTGCGACCACAAGAA...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
3UTR-3UTR GCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGTCTCCACTGAATAAGTaGTTAAGCAGTGCCCCACTT +
Preference number: 2 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQSPLNK*LSSAPL
Trigger: AAGTGGGGCACTGCTTAAGCACTTATTCAGTGGAGA...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGTGGGCAATATCTCCCTaGCTGTTATCTCTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQWAISP*LLSLPK
Trigger: TTTGGGAAGAGATAACAGCCAGGGAGATATTGCCCA...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR TCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGATACCATACCACCTATaGCCTATGAAATGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQIPYHL*PMKWLF
Trigger: GAAGAGCCATTTCATAGGTCATAGGTGGTATGGTAT...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR TCA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAAGAAGGTCAGCCTCTTTaGGTTAGAACCTGGGATCAA +
Preference number: 2 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKEGQPL*VRTWDQ
Trigger: TTGATCCCAGGTTCTAACTCAAAGAGGCTGACCTTC...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp AATACAACGTCCTCATGCTATCTTAGCTGGGGGAAGGTCAGCCTCTTTGAGTTATTCTTGTGGTCGCAGTaGTTGGTGGTGGTTGCGTTT +
Preference number: 2 (lower is better)
Translates to: NTTSSCYLSWGKVSLFELFLWSQ*LVVVAF
Trigger: AAACGCAACCACCACCAACCACTGCGACCACAAGAA...TAACTCAAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACGAGTGGAGGGTAACATaGAGAGCCCCCATGGAGAAT +
Preference number: 2 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHEWRVT*RAPMEN
Trigger: ATTCTCCATGGGGGCTCTCCATGTTACCCTCCACTC...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGCCTAGCAGAGAAAATTaGATAGAAGTAGGGGGTAAG +
Preference number: 2 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQPSREN*IEVGGK
Trigger: CTTACCCCCTACTTCTATCCAATTTTCTCTGCTAGG...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR CAA 90 bp GTTGAGCCTGAGCACACCAGGAGGACATACTTCTCAGGGCCAAGGTaGACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATG +
Preference number: 2 (lower is better)
Translates to: VEPEHTRRTYFSGPR*TLKKYTIPPMTYEM
Trigger: CATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGTCAACCTTGGCCCTGAGAAGTATGTCCTCCTGGTGTGCTCAGGCTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR TCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCATGTTGTTTTTGGCACTaGAGGGTTTGGGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSCCFWH*RVWDGA
Trigger: AGCCCCATCCCAAACCCTTCAGTGCCAAAAACAACA...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR TCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTGTTGTTTTTGGCACTaGAGGGTTTGGGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSCCFWH*RVWDGA
Trigger: AGCCCCATCCCAAACCCTTCAGTGCCAAAAACAACA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
3UTR-3UTR TCA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACTGTTGTTTTTGGCACTaGAGGGTTTGGGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHCCFWH*RVWDGA
Trigger: AGCCCCATCCCAAACCCTTCAGTGCCAAAAACAACA...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR TCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATGTTGTTTTTGGCACTaGAGGGTTTGGGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: STLRDTGFIRQGYSPLIACCFWH*RVWDGA
Trigger: AGCCCCATCCCAAACCCTTCAGTGCCAAAAACAACA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
3UTR-3UTR CCA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACGGTCGCAGTGGTTGGTaGTGGTTGCGTTTCATTTTG +
Preference number: 2 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHGRSGW*WLRFIL
Trigger: CAAAATGAAACGCAACCACCACCAACCACTGCGACC...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATGTGGTCGCAGTGGTTaGTGGTGGTTGCGTTTCATT +
Preference number: 2 (lower is better)
Translates to: STLRDTGFIRQGYSPLIACGRSG*WWLRFI
Trigger: AATGAAACGCAACCACCACCAACCACTGCGACCACA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
3UTR-3UTR CCA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACTGTGGTCGCAGTGGTTaGTGGTGGTTGCGTTTCATT +
Preference number: 2 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHCGRSG*WWLRFI
Trigger: AATGAAACGCAACCACCACCAACCACTGCGACCACA...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATTCTTGTGGTCGCAGTaGTTGGTGGTGGTTGCGTTT +
Preference number: 2 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAFLWSQ*LVVVAF
Trigger: AAACGCAACCACCACCAACCACTGCGACCACAAGAA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
3UTR-3UTR CCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCAGAATCATCCTTCTTGTaGTCGCAGTGGTTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSESSFL*SQWLVV
Trigger: CACCACCAACCACTGCGACCACAAGAAGGATGATTC...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTGAATCATCCTTCTTGTaGTCGCAGTGGTTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSESSFL*SQWLVV
Trigger: CACCACCAACCACTGCGACCACAAGAAGGATGATTC...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
3UTR-3UTR TCA 90 bp GTTGATGTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTCTCCAATCTGAAAACTaGAGAGGGGTGGGTAGGGAG +
Preference number: 2 (lower is better)
Translates to: VDVKGLFPTLPRCRLPNGLQSEN*RGVGRE
Trigger: CTCCCTACCCACCCCTCTTCAGTTTTCAGATTGGAG...ACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAACATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR GCA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACACCCTCATCCTGAGTTaGTTTTCACCTGTGTTCTCC +
Preference number: 2 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHTLILS*FSPVFS
Trigger: GGAGAACACAGGTGAAAAGCAACTCAGGATGAGGGT...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp GTAAGGAGAAGGAAAGGGCCTAACAGAACCTGCAAACCATGGATATTAGTAAGAGAATCATCCTTCTTGTaGTCGCAGTGGTTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: VRRRKGPNRTCKPWILVRESSFL*SQWLVV
Trigger: CACCACCAACCACTGCGACCACAAGAAGGATGATTC...TCTTACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCCTTTCCTTCTCCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACTCCCAAAATTCTGCTTaGTTTAGGAGGCCAAGTGCC +
Preference number: 2 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHSQNSA*FRRPSA
Trigger: GGCACTTGGCCTCCTAAACCAAGCAGAATTTTGGGA...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACAAGCTGAACTCAGCCTaGGCTTCTCTCTATAAACCC +
Preference number: 2 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHKLNSA*ASLYKP
Trigger: GGGTTTATAGAGAGAAGCCCAGGCTGAGTTCAGCTT...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR TCA 90 bp AGCCCCAATCATACGTATATTGGAATACAACGTCCTCATGCTATCTTAGCTGGGTCATTAGTGTTCCAGTaGCTCTACTCTCAGAGACAC +
Preference number: 2 (lower is better)
Translates to: SPNHTYIGIQRPHAILAGSLVFQ*LYSQRH
Trigger: GTGTCTCTGAGAGTAGAGTCACTGGAACACTAATGA...CCCAGCTAAGATAGCATGAGGACGTTGTATTCCAATATACGTATGATTGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR TCA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATATCAGGAGTCCTTCTCTaGCTGCACATCTGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRISGVLL*LHICPC
Trigger: GCAGGGGCAGATGTGCAGTCAGAGAAGGACTCCTGA...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR TCA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACTTCAGGAAAACCTGTTaGATCATCCTTCTTGTGGTC +
Preference number: 2 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHFRKTC*IILLVV
Trigger: GACCACAAGAAGGATGATTCAACAGGTTTTCCTGAA...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR TCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCAACCACCTATGACCTATaGAATGGCTCTTCCACATTA +
Preference number: 2 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSTTYDL*NGSSTL
Trigger: TAATGTGGAAGAGCCATTTCATAGGTCATAGGTGGT...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR TCA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATACCATACCACCTATaGCCTATGAAATGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHIPYHL*PMKWLF
Trigger: GAAGAGCCATTTCATAGGTCATAGGTGGTATGGTAT...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR TCA 90 bp GTTGATGTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTTCTGCAGTGGTAGGCTaGAGGCTGAGAAAAATCTTG +
Preference number: 2 (lower is better)
Translates to: VDVKGLFPTLPRCRLPNGSAVVG*RLRKIL
Trigger: CAAGATTTTTCTCAGCCTTCAGCCTACCACTGCAGA...ACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAACATCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR GCA 90 bp GTTGATGTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTACCCTCATCCTGAGTTaGTTTTCACCTGTGTTCTCC +
Preference number: 2 (lower is better)
Translates to: VDVKGLFPTLPRCRLPNGTLILS*FSPVFS
Trigger: GGAGAACACAGGTGAAAAGCAACTCAGGATGAGGGT...ACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAACATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR GCA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACCTTTTACACTTAGCTTaGTTAGCATTGCTCCCCATG +
Preference number: 2 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHLLHLA*LALLPM
Trigger: CATGGGGAGCAATGCTAAGCAAGCTAAGTGTAAAAG...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACAAAGCTAATGACACATaGCACGCACTGAATCATGCA +
Preference number: 2 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHKANDT*HALNHA
Trigger: TGCATGATTCAGTGCGTGCCATGTGTCATTAGCTTT...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR TCA 90 bp GAGAGTTGGGATCTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAAACCACCTATGACCTATaGAATGGCTCTTCCACATTA +
Preference number: 2 (lower is better)
Translates to: ESWDLQESYMSGILTSNKTTYDL*NGSSTL
Trigger: TAATGTGGAAGAGCCATTTCATAGGTCATAGGTGGT...TTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAGATCCCAACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATAGAGTGGAGGGTAACATaGAGAGCCCCCATGGAGAAT +
Preference number: 2 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRIEWRVT*RAPMEN
Trigger: ATTCTCCATGGGGGCTCTCCATGTTACCCTCCACTC...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR GCA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATTCTCCACTGAATAAGTaGTTAAGCAGTGCCCCACTT +
Preference number: 2 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHSPLNK*LSSAPL
Trigger: AAGTGGGGCACTGCTTAAGCACTTATTCAGTGGAGA...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CCA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATATTCTTGTGGTCGCAGTaGTTGGTGGTGGTTGCGTTT +
Preference number: 2 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRIFLWSQ*LVVVAF
Trigger: AAACGCAACCACCACCAACCACTGCGACCACAAGAA...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR CAA 90 bp CATTATCAACTTAATCCATCTCCCTATACTCCTTCAATTATTTCCTaGGTTATCTCACTTTCTAAAGATGACAGAGCATCATCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: HYQLNPSPYTPSIIS*VISLSKDDRASSGH
Trigger: GTGGCCAGATGATGCTCTGTCATCTTTAGAAAGTGAGATAACCAAGGAAATAATTGAAGGAGTATAGGGAGATGGATTAAGTTGATAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR GCA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATAGGGCCTAACAGAACCTaGAAACCATGGATATTAGTA +
Preference number: 2 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRIGPNRT*KPWILV
Trigger: TACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCC...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR GCA 90 bp CTTAATCCATCTCCCTATACTCCTTCAATTATTTCCTTGGTTATCTCACTTTCTCTTTTACACTTAGCTTaGTTAGCATTGCTCCCCATG +
Preference number: 2 (lower is better)
Translates to: LNPSPYTPSIISLVISLSLLHLA*LALLPM
Trigger: CATGGGGAGCAATGCTAAGCAAGCTAAGTGTAAAAG...AGAAAGTGAGATAACCAAGGAAATAATTGAAGGAGTATAGGGAGATGGATTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR CCA 72 bp CCACTTCTCCAACAATGTCTATCTCCATCAGAGGTTTaGGCCAAGGAGTGGAGGGTAACATGGAGAGCCCCC +
Preference number: 3 (lower is better)
Translates to: PLLQQCLSPSEV*AKEWRVTWRAP
Trigger: GGGGGCTCTCCATGTTACCCTCCACTCCTTGGCCCAAACCTCTGATGGAGATAGACATTGTTGGAGAAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp ACTTCTCCAACAATGTCTATCTCCATCAGAGGTTTGGGCCAAGGAGTGGAGGGTTTGTGGTCGCAGTGGTaGGTGGTGGTTGCGTTTCAT +
Preference number: 3 (lower is better)
Translates to: TSPTMSISIRGLGQGVEGLWSQW*VVVAFH
Trigger: ATGAAACGCAACCACCACCAACCACTGCGACCACAA...ACCCTCCACTCCTTGGCCCAAACCTCTGATGGAGATAGACATTGTTGGAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGTTAGCTTGCTTAGCATaGCTCCCCATGTCAGAGGCT +
Preference number: 3 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQLACLA*LPMSEA
Trigger: AGCCTCTGACATGGGGAGCAATGCTAAGCAAGCTAA...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR TCA 72 bp GACTGCTGGAGAGCTGGAAGCCAGTTGCACCAAGAATaGGAGTTGGGATCTCCAAGAAAGCTATATGTCAGG +
Preference number: 3 (lower is better)
Translates to: DCWRAGSQLHQE*ELGSPRKLYVR
Trigger: CCTGACATATAGCTTTCTTGGAGATCCCAACTCTCATTCTTGGTGCAACTGGCTTCCAGCTCTCCAGCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR CCA 72 bp ATCTCCCTGGCTGTTATCTCTTCCCAAAATTCTGCTTaGTTTAGGAGGCCAAGTGCCTTCAGCCACCAGACT +
Preference number: 3 (lower is better)
Translates to: ISLAVISSQNSA*FRRPSAFSHQT
Trigger: AGTCTGGTGGCTGAAGGCACTTGGCCTCCTAAACCAAGCAGAATTTTGGGAAGAGATAACAGCCAGGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTTGTGGTCGCAGTGGTaGGTGGTGGTTGCGTTTCAT +
Preference number: 3 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSLWSQW*VVVAFH
Trigger: ATGAAACGCAACCACCACCAACCACTGCGACCACAA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
3UTR-3UTR CAA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCATTGTGGTCGCAGTGGTaGGTGGTGGTTGCGTTTCAT +
Preference number: 3 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSLWSQW*VVVAFH
Trigger: ATGAAACGCAACCACCACCAACCACTGCGACCACAA...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGCACCCTCATCCTGAGTaGCTTTTCACCTGTGTTCTC +
Preference number: 3 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKHPHPE*LFTCVL
Trigger: GAGAACACAGGTGAAAAGCAACTCAGGATGAGGGTG...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGTCTTTTACACTTAGCTaGCTTAGCATTGCTCCCCAT +
Preference number: 3 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQSFTLS*LSIAPH
Trigger: ATGGGGAGCAATGCTAAGCAAGCTAAGTGTAAAAGA...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAATTCTCAGGGCCAAGGTaGACTCTGAAGAAATATACC +
Preference number: 3 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKFSGPR*TLKKYT
Trigger: GGTATATTTCTTCAGAGTCAACCTTGGCCCTGAGAA...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACTTAGCTTGCTTAGCATaGCTCCCCATGTCAGAGGCT +
Preference number: 3 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHLACLA*LPMSEA
Trigger: AGCCTCTGACATGGGGAGCAATGCTAAGCAAGCTAA...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR TCA 72 bp AGCTATATGTCAGGGATTCTCACTTCCAACAAAAGCTaGACTCAGCCTGGGCTTCTCTCTATAAACCCTGCC +
Preference number: 3 (lower is better)
Translates to: SYMSGILTSNKS*TQPGLLSINPA
Trigger: GGCAGGGTTTATAGAGAGAAGCCCAGGCTGAGTTCAGCTTTTGTTGGAAGTGAGAATCCCTGACATATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR GCA 72 bp CCCCAATCATACGTATATTGGAATACAACGTCCTCATaGTATCTTAGCTGGGGGAAGGTCAGCCTCTTTGAG +
Preference number: 3 (lower is better)
Translates to: PQSYVYWNTTSS*YLSWGKVSLFE
Trigger: CTCAAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATTCCAATATACGTATGATTGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR CCA 72 bp GTATATTGGAATACAACGTCCTCATGCTATCTTAGCTaGGGGAAGGTCAGCCTCTTTGAGTTAGAACCTGGG +
Preference number: 3 (lower is better)
Translates to: VYWNTTSSCYLS*GKVSLFELEPG
Trigger: CCCAGGTTCTAACTCAAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATTCCAATATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCATTTTGTTGTTGTTTTaGGCACTGAAGGGTTTGGGA +
Preference number: 3 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPILLLF*ALKGLG
Trigger: TCCCAAACCCTTCAGTGCCAAAAACAACAACAAAAT...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
3UTR-3UTR CAA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTCAGGAAAACCTGTaGAATCATCCTTCTTGTGGT +
Preference number: 3 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPLQENL*NHPSCG
Trigger: ACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
3UTR TCA 72 bp TTAAAAGCAATCATCCATCTTGAGGGTCCGGTTTCATaGACCATGACCACATTGACACGCGAGAGACTGAAC +
Preference number: 3 (lower is better)
Translates to: LKAIIHLEGPVS*TMTTLTRERLN
Trigger: GTTCAGTCTCTCGCGTGTCAATGTGGTCATGGTTCATGAAACCGGACCCTCAAGATGGATGATTGCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR CCA 72 bp TTTTTATCCGCTCATGTTACTTGTGGGCTCAGTAGCTaGAGAGGCATCTTACTAGGCCAAAGGCAAAAAGTC +
Preference number: 3 (lower is better)
Translates to: FLSAHVTCGLSS*RGILLGQRQKV
Trigger: GACTTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAACATGAGCGGATAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGTTTCATTTTGTTGTaGTTTTTGGCACTGAAGGGT +
Preference number: 3 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPRFILL*FLALKG
Trigger: ACCCTTCAGTGCCAAAAACAACAACAAAATGAAACG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
3UTR GCA 72 bp GTTGATGTTAAAGGGTTATTTCCAACTCTTCCAAGATaGAGACTCCCTAATGGTGGGTCACATCGGATTCTG +
Preference number: 3 (lower is better)
Translates to: VDVKGLFPTLPR*RLPNGGSHRIL
Trigger: CAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAACATCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR CCA 72 bp GCCAGAATATGGTTATCAGTAAAAGCTAATGACACATaGCACGCACTGAATCATGCACCTAGGAGAGTGACT +
Preference number: 3 (lower is better)
Translates to: ARIWLSVKANDT*HALNHAPRRVT
Trigger: AGTCACTCTCCTAGGTGCATGATTCAGTGCGTGCCATGTGTCATTAGCTTTTACTGATAACCATATTCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp AATACAACGTCCTCATGCTATCTTAGCTGGGGGAAGGTCAGCCTCTTTGAGTTAATTTTGTTGTTGTTTTaGGCACTGAAGGGTTTGGGA +
Preference number: 3 (lower is better)
Translates to: NTTSSCYLSWGKVSLFELILLLF*ALKGLG
Trigger: TCCCAAACCCTTCAGTGCCAAAAACAACAACAAAAT...TAACTCAAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACCTTCAGGAAAACCTGTaGAATCATCCTTCTTGTGGT +
Preference number: 3 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHLQENL*NHPSCG
Trigger: ACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAG...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTCTTCAGGAAAACCTGTaGAATCATCCTTCTTGTGGT +
Preference number: 3 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSLQENL*NHPSCG
Trigger: ACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAG...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
3UTR-3UTR CAA 90 bp CTTAATCCATCTCCCTATACTCCTTCAATTATTTCCTTGGTTATCTCACTTTCTATCTCCATCAGAGGTTaGGGCCAAGGAGTGGAGGGT +
Preference number: 3 (lower is better)
Translates to: LNPSPYTPSIISLVISLSISIRG*GQGVEG
Trigger: ACCCTCCACTCCTTGGCCCAAACCTCTGATGGAGAT...AGAAAGTGAGATAACCAAGGAAATAATTGAAGGAGTATAGGGAGATGGATTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCAATGGGAAGCTCTATTTaGTGTGAGCTTTTGATGAGG +
Preference number: 3 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSMGSSI*CELLMR
Trigger: CCTCATCAAAAGCTCACACAAAATAGAGCTTCCCAT...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTATTTTGTTGTTGTTTTaGGCACTGAAGGGTTTGGGA +
Preference number: 3 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSILLLF*ALKGLG
Trigger: TCCCAAACCCTTCAGTGCCAAAAACAACAACAAAAT...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
3UTR-3UTR CAA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCAATTTTGTTGTTGTTTTaGGCACTGAAGGGTTTGGGA +
Preference number: 3 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSILLLF*ALKGLG
Trigger: TCCCAAACCCTTCAGTGCCAAAAACAACAACAAAAT...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp GAGAGTTGGGATCTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAAGTTACTCTCCCCTTATaGCAGTACAGTGTTATTTTT +
Preference number: 3 (lower is better)
Translates to: ESWDLQESYMSGILTSNKVTLPL*QYSVIF
Trigger: AAAAATAACACTGTACTGCAATAAGGGGAGAGTAAC...TTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAGATCCCAACTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp GTTGATGTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTCCAATCATACGTATATaGGAATACAACGTCCTCATG +
Preference number: 3 (lower is better)
Translates to: VDVKGLFPTLPRCRLPNGPIIRI*EYNVLM
Trigger: CATGAGGACGTTGTATTCCAATATACGTATGATTGG...ACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAACATCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR TCA 72 bp GAGAGGCATCTTACTAGGCCAAAGGCAAAAAGTCTTTaGAGCATGTTGATGTTAAAGGGTTATTTCCAACTC +
Preference number: 3 (lower is better)
Translates to: ERHLTRPKAKSL*SMLMLKGYFQL
Trigger: GAGTTGGAAATAACCCTTTAACATCAACATGCTTCAAAGACTTTTTGCCTTTGGCCTAGTAAGATGCCTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp CTTAATCCATCTCCCTATACTCCTTCAATTATTTCCTTGGTTATCTCACTTTCTCTTCAGGAAAACCTGTaGAATCATCCTTCTTGTGGT +
Preference number: 3 (lower is better)
Translates to: LNPSPYTPSIISLVISLSLQENL*NHPSCG
Trigger: ACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAG...AGAAAGTGAGATAACCAAGGAAATAATTGAAGGAGTATAGGGAGATGGATTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR-3UTR CAA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATATCTTTTACACTTAGCTaGCTTAGCATTGCTCCCCAT +
Preference number: 3 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRISFTLS*LSIAPH
Trigger: ATGGGGAGCAATGCTAAGCAAGCTAAGTGTAAAAGA...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR TCA 72 bp GACTCTGAAGAAATATACCATACCACCTATGACCTATaGAATGGCTCTTCCACATTAAAGGAACTGTTTTTC +
Preference number: 3 (lower is better)
Translates to: DSEEIYHTTYDL*NGSSTLKELFF
Trigger: GAAAAACAGTTCCTTTAATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGCCGCTGCTGGCTCCTaGCCCGCTGTTGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPAAAGS*PAVAGE
Trigger: CTCCCCCGCAACAGCGGGGCAGGAGCCAGCAGCGGC...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCTCCACTGCCGCCGCTaGTGGCTCCTGCCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPLHCRR*WLLPRC
Trigger: ACAGCGGGGCAGGAGCCAGCAGCGGCGGCAGTGGAG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCACTGCCGCCGCTGCTaGCTCCTGCCCCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPHCRRC*LLPRCC
Trigger: GCAACAGCGGGGCAGGAGCCAGCAGCGGCGGCAGTG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTCCACTGCCGCCGCTaGTGGCTCCTGCCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPLHCRR*WLLPRC
Trigger: ACAGCGGGGCAGGAGCCAGCAGCGGCGGCAGTGGAG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAACACTGCCGCCGCTGCTaGCTCCTGCCCCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKHCRRC*LLPRCC
Trigger: GCAACAGCGGGGCAGGAGCCAGCAGCGGCGGCAGTG...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR CAA 72 bp TTAGGAGGCCAAGTGCCTTCAGCCACCAGACTGCCGTaGAGCCTGAGCACACCAGGAGGACATACTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LGGQVPSATRLP*SLSTPGGHTSQ
Trigger: CTGAGAAGTATGTCCTCCTGGTGTGCTCAGGCTCAACGGCAGTCTGGTGGCTGAAGGCACTTGGCCTCCTAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGCTCCACTGCCGCCGCTaGTGGCTCCTGCCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWLHCRR*WLLPRC
Trigger: ACAGCGGGGCAGGAGCCAGCAGCGGCGGCAGTGGAG...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGACCATTCTCTCCACTaGCGCCGCTGCTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPDHSLH*RRCWLL
Trigger: CAGGAGCCAGCAGCGGCGGCAGTGGAGAGAATGGTC...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTCACTGCCGCCGCTGCTaGCTCCTGCCCCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSHCRRC*LLPRCC
Trigger: GCAACAGCGGGGCAGGAGCCAGCAGCGGCGGCAGTG...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCACACTGCCGCCGCTGCTaGCTCCTGCCCCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAHCRRC*LLPRCC
Trigger: GCAACAGCGGGGCAGGAGCCAGCAGCGGCGGCAGTG...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCAGGTTTGGGATGGGGCTaGGGAGCCCGAGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HTMGSSILCELLMRLPLPGLGWG*GARACS
Trigger: GGAGCAGGCTCGGGCTCCCCAGCCCCATCCCAAACC...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp GTTGATGTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGCCGCTGCTGGCTCCTaGCCCGCTGTTGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: VDVKGLFPTLPRCRLPNGAAAGS*PAVAGE
Trigger: CTCCCCCGCAACAGCGGGGCAGGAGCCAGCAGCGGC...ACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAACATCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAAGACCATTCTCTCCACTaGCGCCGCTGCTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKDHSLH*RRCWLL
Trigger: CAGGAGCCAGCAGCGGCGGCAGTGGAGAGAATGGTC...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCGACCATTCTCTCCACTaGCGCCGCTGCTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPDHSLH*RRCWLL
Trigger: CAGGAGCCAGCAGCGGCGGCAGTGGAGAGAATGGTC...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGGAGTCCTTCTCTGACTaGACATCTGCCCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQESFSD*TSAPAL
Trigger: GAGGGCAGGGGCAGATGTGCAGTCAGAGAAGGACTC...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCTTATCGCCCCCAGCTTaGGCATCGGTGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPLSPPA*ASVAAG
Trigger: CCCTGCAGCCACCGATGCCCAAGCTGGGGGCGATAA...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGGTTTGGGATGGGGCTaGGGAGCCCGAGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAGLGWG*GARACS
Trigger: GGAGCAGGCTCGGGCTCCCCAGCCCCATCCCAAACC...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGGCTTCGGGGGCTCTGTaGGTTGCGACAAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQASGAL*VATKQI
Trigger: GATTTGCTTTGTCGCAACTCACAGAGCCCCCGAAGC...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTCAGGAGTCCTTCTCTaGCTGCACATCTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPSGVLL*LHICPC
Trigger: GCAGGGGCAGATGTGCAGTCAGAGAAGGACTCCTGA...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCCAGCTCTCCCACCATaGCATTCCAGGCCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPPALPP*HSRPSC
Trigger: ACACGAAGGCCTGGAATGGCATGGTGGGAGAGCTGG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCAGACGCCACCAACGATaGGACCAGACAGGGACCTGG +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPRRHQR*DQTGTW
Trigger: CCAGGTCCCTGTCTGGTCGCATCGTTGGTGGCGTCT...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGCTCCTTAGTAGATCCTaGTTCCAGCGTCCCGTAGGC +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQLLSRS*FQRPVG
Trigger: GCCTACGGGACGCTGGAAGCAGGATCTACTAAGGAG...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATGCCGCTGCTGGCTCCTaGCCCGCTGTTGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHAAAGS*PAVAGE
Trigger: CTCCCCCGCAACAGCGGGGCAGGAGCCAGCAGCGGC...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCTGCCTCCGCAGGCTCTaGAAAGCCTCAGCCATCACC +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPCLRRL*KASAIT
Trigger: GGTGATGGCTGAGGCTTTCCAGAGCCTGCGGAGGCA...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp AATACAACGTCCTCATGCTATCTTAGCTGGGGGAAGGTCAGCCTCTTTGAGTTATTATCGCCCCCAGCTTaGGCATCGGTGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: NTTSSCYLSWGKVSLFELLSPPA*ASVAAG
Trigger: CCCTGCAGCCACCGATGCCCAAGCTGGGGGCGATAA...TAACTCAAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCAGTAGCCCACGTGCTTaGCAATCTCTGCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPSSPRA*QSLPPA
Trigger: AGCTGGCGGCAGAGATTGCCAAGCACGTGGGCTACT...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGGACTTGGGGAAGTCATaGCTGACCACCCGACCATTC +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQDLGKS*LTTRPF
Trigger: GAATGGTCGGGTGGTCAGCCATGACTTCCCCAAGTC...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCCAGTTACAATCCCGTaGCTCCCAAGGGCATCCCTG +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPPVTIP*LPRASL
Trigger: CAGGGATGCCCTTGGGAGCCACGGGATTGTAACTGG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGCTTCGGGGGCTCTGTaGGTTGCGACAAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPASGAL*VATKQI
Trigger: GATTTGCTTTGTCGCAACTCACAGAGCCCCCGAAGC...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCTCACCCCATCGTAGGTaGGCGCAGAGGTGTACTTGG +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPSPHRR*AQRCTW
Trigger: CCAAGTACACCTCTGCGCTCACCTACGATGGGGTGA...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp ACTTCTCCAACAATGTCTATCTCCATCAGAGGTTTGGGCCAAGGAGTGGAGGGTGTATCCAGGACTTTCTaGAGGACGGATAAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: TSPTMSISIRGLGQGVEGVSRTF*RTDKPR
Trigger: CCGGGGCTTATCCGTCCTGCAGAAAGTCCTGGATAC...ACCCTCCACTCCTTGGCCCAAACCTCTGATGGAGATAGACATTGTTGGAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGAGACGCCACCAACGATaGGACCAGACAGGGACCTGG +
Preference number: 4 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKRRHQR*DQTGTW
Trigger: CCAGGTCCCTGTCTGGTCGCATCGTTGGTGGCGTCT...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGCAAGGGGTCTCCATCTaGTCCAGTTACAATCCCGTG +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQQGVSI*SSYNPV
Trigger: CACGGGATTGTAACTGGAGCAGATGGAGACCCCTTG...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCGAGTCCTTCTCTGACTaGACATCTGCCCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPESFSD*TSAPAL
Trigger: GAGGGCAGGGGCAGATGTGCAGTCAGAGAAGGACTC...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCTGCTGCAGAGCTCTCTaGATGTCGATCCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPCCRAL*MSIPWP
Trigger: GGGCCAAGGGATCGACATCCAGAGAGCTCTGCAGCA...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCGTGGAGCGTGTAGTTaGTCCGGCGTCCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPRGACS*SGVLSH
Trigger: ATGAGAAAGGACGCCGGACCAACTACACGCTCCACG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGTTATCGCCCCCAGCTTaGGCATCGGTGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWLSPPA*ASVAAG
Trigger: CCCTGCAGCCACCGATGCCCAAGCTGGGGGCGATAA...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCAGTAGCCCACGTGCTTaGCAATCTCTGCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPSSPRA*QSLPPA
Trigger: AGCTGGCGGCAGAGATTGCCAAGCACGTGGGCTACT...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGACTTGGGGAAGTCATaGCTGACCACCCGACCATTC +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPDLGKS*LTTRPF
Trigger: GAATGGTCGGGTGGTCAGCCATGACTTCCCCAAGTC...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAACCAGTTACAATCCCGTaGCTCCCAAGGGCATCCCTG +
Preference number: 4 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKPVTIP*LPRASL
Trigger: CAGGGATGCCCTTGGGAGCCACGGGATTGTAACTGG...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCAGTTACAATCCCGTaGCTCCCAAGGGCATCCCTG +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPPVTIP*LPRASL
Trigger: CAGGGATGCCCTTGGGAGCCACGGGATTGTAACTGG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGTTTGGGCCAAGGAGTaGAGGGTAACATGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPVWAKE*RVTWRA
Trigger: GGCTCTCCATGTTACCCTCCACTCCTTGGCCCAAAC...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGTGTGGGCTCAGTAGCTaGAGAGGCATCTTACTAGGC +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQCGLSS*RGILLG
Trigger: GCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACA...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCAGCATTGAGGCGTTCTaGTTCACAGTCCACCACCAC +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPSIEAF*FTVHHH
Trigger: GTGGTGGTGGACTGTGAATCAGAACGCCTCAATGCT...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGTCACCCCATCGTAGGTaGGCGCAGAGGTGTACTTGG +
Preference number: 4 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKSPHRR*AQRCTW
Trigger: CCAAGTACACCTCTGCGCTCACCTACGATGGGGTGA...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCATCACCCCATCGTAGGTaGGCGCAGAGGTGTACTTGG +
Preference number: 4 (lower is better)
Translates to: HTMGSSILCELLMRLPLPSPHRR*AQRCTW
Trigger: CCAAGTACACCTCTGCGCTCACCTACGATGGGGTGA...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCATGGGGAAGTCATGGCTaGCCACCCGACCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: HTMGSSILCELLMRLPLPWGSHG*PPDHSL
Trigger: GAGAGAATGGTCGGGTGGTCAGCCATGACTTCCCCA...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCACACATGGCACGCACTaGATCATGCACCTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPTHGTH*IMHLGE
Trigger: CTCTCCTAGGTGCATGATTCAGTGCGTGCCATGTGT...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCGTATCCAGGACTTTCTaGAGGACGGATAAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPVSRTF*RTDKPR
Trigger: CCGGGGCTTATCCGTCCTGCAGAAAGTCCTGGATAC...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp ACTTCTCCAACAATGTCTATCTCCATCAGAGGTTTGGGCCAAGGAGTGGAGGGTGTGCTTGGCAATCTCTaGCGCCAGCTCTACACAGTA +
Preference number: 4 (lower is better)
Translates to: TSPTMSISIRGLGQGVEGVLGNL*RQLYTV
Trigger: TACTGTGTAGAGCTGGCGGCAGAGATTGCCAAGCAC...ACCCTCCACTCCTTGGCCCAAACCTCTGATGGAGATAGACATTGTTGGAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGCCAGCTCTCCCACCATaGCATTCCAGGCCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKPALPP*HSRPSC
Trigger: ACACGAAGGCCTGGAATGGCATGGTGGGAGAGCTGG...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAAGACGCCACCAACGATaGGACCAGACAGGGACCTGG +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIARRHQR*DQTGTW
Trigger: CCAGGTCCCTGTCTGGTCGCATCGTTGGTGGCGTCT...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp GTAAGGAGAAGGAAAGGGCCTAACAGAACCTGCAAACCATGGATATTAGTAAGAGACCATTCTCTCCACTaGCGCCGCTGCTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VRRRKGPNRTCKPWILVRDHSLH*RRCWLL
Trigger: CAGGAGCCAGCAGCGGCGGCAGTGGAGAGAATGGTC...TCTTACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCCTTTCCTTCTCCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCAAGGGGTCTCCATCTaGTCCAGTTACAATCCCGTG +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPQGVSI*SSYNPV
Trigger: CACGGGATTGTAACTGGAGCAGATGGAGACCCCTTG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATGCCTCCGCAGGCTCTaGAAAGCCTCAGCCATCACC +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIACLRRL*KASAIT
Trigger: GGTGATGGCTGAGGCTTTCCAGAGCCTGCGGAGGCA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTGCCTCCGCAGGCTCTaGAAAGCCTCAGCCATCACC +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSCLRRL*KASAIT
Trigger: GGTGATGGCTGAGGCTTTCCAGAGCCTGCGGAGGCA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCATGGATGTCGATCCCTTaGCCCCAGGGAACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSWMSIP*PQGTAG
Trigger: CCCAGCTGTTCCCTGGGGCCAAGGGATCGACATCCA...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGTGGATGTCGATCCCTTaGCCCCAGGGAACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWWMSIP*PQGTAG
Trigger: CCCAGCTGTTCCCTGGGGCCAAGGGATCGACATCCA...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGTGCTGCAGAGCTCTCTaGATGTCGATCCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKCCRAL*MSIPWP
Trigger: GGGCCAAGGGATCGACATCCAGAGAGCTCTGCAGCA...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAACGTGGAGCGTGTAGTTaGTCCGGCGTCCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKRGACS*SGVLSH
Trigger: ATGAGAAAGGACGCCGGACCAACTACACGCTCCACG...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCAGCTTGGGCATCGGTaGCTGCAGGGACAAACTTAT +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPQLGHR*LQGQTY
Trigger: ATAAGTTTGTCCCTGCAGCCACCGATGCCCAAGCTG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp ACTTCTCCAACAATGTCTATCTCCATCAGAGGTTTGGGCCAAGGAGTGGAGGGTTACCTCCCACCTTCATaGTGTCACAGGGTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: TSPTMSISIRGLGQGVEGYLPPS*CHRVSA
Trigger: AGCGGAAACCCTGTGACACCATGAAGGTGGGAGGTA...ACCCTCCACTCCTTGGCCCAAACCTCTGATGGAGATAGACATTGTTGGAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCACTGCCAGGTTTACTaGATTTCTCAGGGCAGACCC +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPHCQVY*ISQGRP
Trigger: GGGTCTGCCCTGAGAAATCCAGTAAACCTGGCAGTG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285900.10
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCACCAGTTACAATCCCGTaGCTCCCAAGGGCATCCCTG +
Preference number: 4 (lower is better)
Translates to: HTMGSSILCELLMRLPLPPVTIP*LPRASL
Trigger: CAGGGATGCCCTTGGGAGCCACGGGATTGTAACTGG...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCAAAGCAGTGCCCCACTTaGGGAAGGCAGCCCACTTCT +
Preference number: 4 (lower is better)
Translates to: HTMGSSILCELLMRLPLPKQCPT*GRQPTS
Trigger: AGAAGTGGGCTGCCTTCCCCAAGTGGGGCACTGCTT...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTCACCCCATCGTAGGTaGGCGCAGAGGTGTACTTGG +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSSPHRR*AQRCTW
Trigger: CCAAGTACACCTCTGCGCTCACCTACGATGGGGTGA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGTCTGTTCTGAACACTTaGATTATCGCCCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQSVLNT*IIAPSL
Trigger: CAAGCTGGGGGCGATAATTCAAGTGTTCAGAACAGA...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGCGTATTTTCCATCACTaGCAATCTCCAGACGGTAGG +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQRIFHH*QSPDGR
Trigger: CCTACCGTCTGGAGATTGTCAGTGATGGAAAATACG...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTCCGTATGGCTTCGTTaGTGGATTGCTGTGGGATCA +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPSVWLR*WIAVGS
Trigger: TGATCCCACAGCAATCCATCAACGAAGCCATACGGA...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATGGGGAAGTCATGGCTaGCCACCCGACCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAWGSHG*PPDHSL
Trigger: GAGAGAATGGTCGGGTGGTCAGCCATGACTTCCCCA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTGGGGAAGTCATGGCTaGCCACCCGACCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSWGSHG*PPDHSL
Trigger: GAGAGAATGGTCGGGTGGTCAGCCATGACTTCCCCA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTGTTGTTTTTGGCACTaGAGGGTTTGGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPCCFWH*RVWDGA
Trigger: AGCCCCATCCCAAACCCTTCAGTGCCAAAAACAACA...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGAGGGTCCGGTTTCATaGACCATGACCACATTGACA +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPEGPVS*TMTTLT
Trigger: TGTCAATGTGGTCATGGTTCATGAAACCGGACCCTC...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGTTCTTCTCGCTGTTCTaGCTGTTCTTTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQFFSLF*LFFSSC
Trigger: GCAGGAGGAAAAGAACAGGCAGAACAGCGAGAAGAA...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285900.10
CDS-3UTR GCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTGACTGCTGTCACCTaGCAGTTCTTCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPLTAVT*QFFSAA
Trigger: AGCTGCTGAGAAGAACTGGCAGGTGACAGCAGTCAA...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCTTCAAATCGCACCTaGTGCAGAGCTCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPPSNRT*CRALWM
Trigger: CATCCAGAGAGCTCTGCAGCAGGTGCGATTTGAAGG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCGTGCTTGGCAATCTCTaGCGCCAGCTCTACACAGTA +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPVLGNL*RQLYTV
Trigger: TACTGTGTAGAGCTGGCGGCAGAGATTGCCAAGCAC...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTCCAGCTCTCCCACCATaGCATTCCAGGCCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSPALPP*HSRPSC
Trigger: ACACGAAGGCCTGGAATGGCATGGTGGGAGAGCTGG...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCAGCCACAGCCACATCTaGTCTTCCATAGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPSHSHI*SSIDQL
Trigger: GAGCTGGTCTATGGAAGAGCAGATGTGGCTGTGGCT...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp GTAAGGAGAAGGAAAGGGCCTAACAGAACCTGCAAACCATGGATATTAGTAAGAAGACGCCACCAACGATaGGACCAGACAGGGACCTGG +
Preference number: 4 (lower is better)
Translates to: VRRRKGPNRTCKPWILVRRRHQR*DQTGTW
Trigger: CCAGGTCCCTGTCTGGTCGCATCGTTGGTGGCGTCT...TCTTACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCCTTTCCTTCTCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp CTTAATCCATCTCCCTATACTCCTTCAATTATTTCCTTGGTTATCTCACTTTCTCTCCACTGCCGCCGCTaGTGGCTCCTGCCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: LNPSPYTPSIISLVISLSLHCRR*WLLPRC
Trigger: ACAGCGGGGCAGGAGCCAGCAGCGGCGGCAGTGGAG...AGAAAGTGAGATAACCAAGGAAATAATTGAAGGAGTATAGGGAGATGGATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCAAGGGGTCTCCATCTaGTCCAGTTACAATCCCGTG +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPQGVSI*SSYNPV
Trigger: CACGGGATTGTAACTGGAGCAGATGGAGACCCCTTG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGTCCACAATGGGTTCCTaGTTAGATGCCAGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQSTMGS*LDARQR
Trigger: TCTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGA...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp AGCCCCAATCATACGTATATTGGAATACAACGTCCTCATGCTATCTTAGCTGGGGCGCAGAGGTGTACTTaGGTCTCTTCCAGTCCACCC +
Preference number: 4 (lower is better)
Translates to: SPNHTYIGIQRPHAILAGAQRCT*VSSSPP
Trigger: GGGTGGACTGGAAGAGACCCAAGTACACCTCTGCGC...CCCAGCTAAGATAGCATGAGGACGTTGTATTCCAATATACGTATGATTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGGCGCAGAGGTGTACTTaGGTCTCTTCCAGTCCACCC +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWAQRCT*VSSSPP
Trigger: GGGTGGACTGGAAGAGACCCAAGTACACCTCTGCGC...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGCGCAGAGGTGTACTTaGGTCTCTTCCAGTCCACCC +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAAQRCT*VSSSPP
Trigger: GGGTGGACTGGAAGAGACCCAAGTACACCTCTGCGC...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATGCTGCAGAGCTCTCTaGATGTCGATCCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIACCRAL*MSIPWP
Trigger: GGGCCAAGGGATCGACATCCAGAGAGCTCTGCAGCA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTGCTGCAGAGCTCTCTaGATGTCGATCCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSCCRAL*MSIPWP
Trigger: GGGCCAAGGGATCGACATCCAGAGAGCTCTGCAGCA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCAGCTTGGGCATCGGTaGCTGCAGGGACAAACTTAT +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPQLGHR*LQGQTY
Trigger: ATAAGTTTGTCCCTGCAGCCACCGATGCCCAAGCTG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTAGTAGCCCACGTGCTTaGCAATCTCTGCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSSSPRA*QSLPPA
Trigger: AGCTGGCGGCAGAGATTGCCAAGCACGTGGGCTACT...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp AGCCCCAATCATACGTATATTGGAATACAACGTCCTCATGCTATCTTAGCTGGGAGTAGCCCACGTGCTTaGCAATCTCTGCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SPNHTYIGIQRPHAILAGSSPRA*QSLPPA
Trigger: AGCTGGCGGCAGAGATTGCCAAGCACGTGGGCTACT...CCCAGCTAAGATAGCATGAGGACGTTGTATTCCAATATACGTATGATTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCATTGGACTGGTCACTaGTTGTCTGGTCCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPHWTGH*LSGPVL
Trigger: AAGGACGGGACCAGACAACCAGTGACCAGTCCAATG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAACATTGGACTGGTCACTaGTTGTCTGGTCCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKHWTGH*LSGPVL
Trigger: AAGGACGGGACCAGACAACCAGTGACCAGTCCAATG...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCCAAACTCATTGGACTaGTCACTGGTTGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPPNSLD*SLVVWS
Trigger: GGACCAGACAACCAGTGACCAGTCCAATGAGTTTGG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGACCAGACAGGGACCTaGGAGAAATGTCACATCCTT +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPDQTGT*EKCHIL
Trigger: AAGGATGTGACATTTCTCCCAGGTCCCTGTCTGGTC...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCTACCTCCCACCTTCATaGTGTCACAGGGTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPYLPPS*CHRVSA
Trigger: AGCGGAAACCCTGTGACACCATGAAGGTGGGAGGTA...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGAAGGAATCGATTGCATaGACTTGGGGAAGTCATGGC +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQKESIA*TWGSHG
Trigger: GCCATGACTTCCCCAAGTCCATGCAATCGATTCCTT...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGGCATCCCTGAACTGTaGCTCATGCAAGGAATCGAT +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPGIPEL*LMQGID
Trigger: ATCGATTCCTTGCATGAGCCACAGTTCAGGGATGCC...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGGTCGCAGTGGTTGGTaGTGGTTGCGTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPGRSGW*WLRFIL
Trigger: CAAAATGAAACGCAACCACCACCAACCACTGCGACC...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGGTTTGGGCCAAGGAGTaGAGGGTAACATGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKVWAKE*RVTWRA
Trigger: GGCTCTCCATGTTACCCTCCACTCCTTGGCCCAAAC...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCAAAGCAGTGCCCCACTTaGGGAAGGCAGCCCACTTCT +
Preference number: 4 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSKQCPT*GRQPTS
Trigger: AGAAGTGGGCTGCCTTCCCCAAGTGGGGCACTGCTT...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGGCTTCGGGGGCTCTGTaGGTTGCGACAAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWASGAL*VATKQI
Trigger: GATTTGCTTTGTCGCAACTCACAGAGCCCCCGAAGC...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTGGTTGTCAAAATGTTaGCTGCTGTCACCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPWLSKC*LLSPAS
Trigger: ACTGGCAGGTGACAGCAGTCAACATTTTGACAACCA...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCGTATTTTCCATCACTaGCAATCTCCAGACGGTAGG +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPRIFHH*QSPDGR
Trigger: CCTACCGTCTGGAGATTGTCAGTGATGGAAAATACG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGAAGGTCAGCCTCTTTaGGTTAGAACCTGGGATCAA +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPEGQPL*VRTWDQ
Trigger: TTGATCCCAGGTTCTAACTCAAAGAGGCTGACCTTC...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAAACTTCCAACAAAAGCTaGACTCAGCCTGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKTSNKS*TQPGLL
Trigger: GAGAAGCCCAGGCTGAGTTCAGCTTTTGTTGGAAGT...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp AGCCCCAATCATACGTATATTGGAATACAACGTCCTCATGCTATCTTAGCTGGGATGCACCTAGGAGAGTaGCTGCTGGAGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SPNHTYIGIQRPHAILAGMHLGE*LLESWK
Trigger: CTTCCAGCTCTCCAGCAGTCACTCTCCTAGGTGCAT...CCCAGCTAAGATAGCATGAGGACGTTGTATTCCAATATACGTATGATTGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCAGCTAGCTGGAGAGGCTaGAAGAGATGGGTACTGCAG +
Preference number: 4 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSASWRG*KRWVLQ
Trigger: CTGCAGTACCCATCTCTTTCAGCCTCTCCAGCTAGC...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518783.1
CDS-3UTR GCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGGGGGGCTCTGTGAGTTaGGACAAAGCAAATCTAAAA +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQGGSVS*DKANLK
Trigger: TTTTAGATTTGCTTTGTCGCAACTCACAGAGCCCCC...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTGTATCCAGGACTTTCTaGAGGACGGATAAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSVSRTF*RTDKPR
Trigger: CCGGGGCTTATCCGTCCTGCAGAAAGTCCTGGATAC...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGCTATTCTTCCACTGCTaGATGATCTTGGCCGGAATA +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQLFFHC*MILAGI
Trigger: TATTCCGGCCAAGATCATGCAGCAGTGGAAGAATAG...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTCACTATTCTTCCACTaGTGCATGATCTTGGCCGGA +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPSLFFH*CMILAG
Trigger: TCCGGCCAAGATCATGCAGCAGTGGAAGAATAGTGA...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp GAGAGTTGGGATCTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAACCAGCTCTCCCACCATaGCATTCCAGGCCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: ESWDLQESYMSGILTSNKPALPP*HSRPSC
Trigger: ACACGAAGGCCTGGAATGGCATGGTGGGAGAGCTGG...TTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAGATCCCAACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGAGCCACAGCCACATCTaGTCTTCCATAGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKSHSHI*SSIDQL
Trigger: GAGCTGGTCTATGGAAGAGCAGATGTGGCTGTGGCT...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp AGCCCCAATCATACGTATATTGGAATACAACGTCCTCATGCTATCTTAGCTGGGCTCCTTAGTAGATCCTaGTTCCAGCGTCCCGTAGGC +
Preference number: 4 (lower is better)
Translates to: SPNHTYIGIQRPHAILAGLLSRS*FQRPVG
Trigger: GCCTACGGGACGCTGGAAGCAGGATCTACTAAGGAG...CCCAGCTAAGATAGCATGAGGACGTTGTATTCCAATATACGTATGATTGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCACTCCTTAGTAGATCCTaGTTCCAGCGTCCCGTAGGC +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIALLSRS*FQRPVG
Trigger: GCCTACGGGACGCTGGAAGCAGGATCTACTAAGGAG...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTCTCCTTAGTAGATCCTaGTTCCAGCGTCCCGTAGGC +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSLLSRS*FQRPVG
Trigger: GCCTACGGGACGCTGGAAGCAGGATCTACTAAGGAG...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp GTTGATGTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTTGCCTCCGCAGGCTCTaGAAAGCCTCAGCCATCACC +
Preference number: 4 (lower is better)
Translates to: VDVKGLFPTLPRCRLPNGCLRRL*KASAIT
Trigger: GGTGATGGCTGAGGCTTTCCAGAGCCTGCGGAGGCA...ACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAACATCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGCGTGGAGCGTGTAGTTaGTCCGGCGTCCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWRGACS*SGVLSH
Trigger: ATGAGAAAGGACGCCGGACCAACTACACGCTCCACG...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCAAACTCATTGGACTaGTCACTGGTTGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPPNSLD*SLVVWS
Trigger: GGACCAGACAACCAGTGACCAGTCCAATGAGTTTGG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp AATACAACGTCCTCATGCTATCTTAGCTGGGGGAAGGTCAGCCTCTTTGAGTTATACCTCCCACCTTCATaGTGTCACAGGGTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: NTTSSCYLSWGKVSLFELYLPPS*CHRVSA
Trigger: AGCGGAAACCCTGTGACACCATGAAGGTGGGAGGTA...TAACTCAAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCTTAAGGCAACCAGCATaGCTAGTCCAAGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPLRQPA*LVQVLR
Trigger: TCGGAGGACTTGGACTAGCCATGCTGGTTGCCTTAA...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTGACTTGGGGAAGTCATaGCTGACCACCCGACCATTC +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSDLGKS*LTTRPF
Trigger: GAATGGTCGGGTGGTCAGCCATGACTTCCCCAAGTC...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCAGACTTGGGGAAGTCATaGCTGACCACCCGACCATTC +
Preference number: 4 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSDLGKS*LTTRPF
Trigger: GAATGGTCGGGTGGTCAGCCATGACTTCCCCAAGTC...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCGGCATCCCTGAACTGTaGCTCATGCAAGGAATCGAT +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPGIPEL*LMQGID
Trigger: ATCGATTCCTTGCATGAGCCACAGTTCAGGGATGCC...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCTGTGGTCGCAGTGGTTaGTGGTGGTTGCGTTTCATT +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPCGRSG*WWLRFI
Trigger: AATGAAACGCAACCACCACCAACCACTGCGACCACA...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCTTCTTGTGGTCGCAGTaGTTGGTGGTGGTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPFLWSQ*LVVVAF
Trigger: AAACGCAACCACCACCAACCACTGCGACCACAAGAA...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAAGAATCATCCTTCTTGTaGTCGCAGTGGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKESSFL*SQWLVV
Trigger: CACCACCAACCACTGCGACCACAAGAAGGATGATTC...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTCCCAAAATTCTGCTTaGTTTAGGAGGCCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPSQNSA*FRRPSA
Trigger: GGCACTTGGCCTCCTAAACCAAGCAGAATTTTGGGA...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCAGCACCTACCCCTAGGTaGGCTCCAAAACCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: HTMGSSILCELLMRLPLPAPTPR*APKPLA
Trigger: TGCTAAAGGTTTTGGAGCCCACCTAGGGGTAGGTGC...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTGAAGGCAGGAGAGTaGAGAGACATAGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPLKAGE*RDIEMV
Trigger: CACCATCTCTATGTCTCTCCACTCTCCTGCCTTCAG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR CAA 72 bp GAGCACACCAGGAGGACATACTTCTCAGGGCCAAGGTaGACTCTGAAGAAATATACCATACCACCTATGACC +
Preference number: 4 (lower is better)
Translates to: EHTRRTYFSGPR*TLKKYTIPPMT
Trigger: GGTCATAGGTGGTATGGTATATTTCTTCAGAGTCAACCTTGGCCCTGAGAAGTATGTCCTCCTGGTGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATTCTTCTCCAGGTCCTaGAAGAGCATCCGGTATCCC +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAFFSRS*KSIRYP
Trigger: GGGATACCGGATGCTCTTTCAGGACCTGGAGAAGAA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCATTCTTCTCCAGGTCCTaGAAGAGCATCCGGTATCCC +
Preference number: 4 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSFFSRS*KSIRYP
Trigger: GGGATACCGGATGCTCTTTCAGGACCTGGAGAAGAA...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTTCTTCTCCAGGTCCTaGAAGAGCATCCGGTATCCC +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSFFSRS*KSIRYP
Trigger: GGGATACCGGATGCTCTTTCAGGACCTGGAGAAGAA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACAGCATTGAGGCGTTCTaGTTCACAGTCCACCACCAC +
Preference number: 4 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHSIEAF*FTVHHH
Trigger: GTGGTGGTGGACTGTGAATCAGAACGCCTCAATGCT...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAAGCATTGAGGCGTTCTaGTTCACAGTCCACCACCAC +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIASIEAF*FTVHHH
Trigger: GTGGTGGTGGACTGTGAATCAGAACGCCTCAATGCT...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTAGCATTGAGGCGTTCTaGTTCACAGTCCACCACCAC +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSSIEAF*FTVHHH
Trigger: GTGGTGGTGGACTGTGAATCAGAACGCCTCAATGCT...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGTGGCGCCACTCTCCTTaGATTTGTTTAAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQWRHSP*ICLSQC
Trigger: ACATTGACTTAAACAAATTCAAGGAGAGTGGCGCCA...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCAACTTCCAACAAAAGCTaGACTCAGCCTGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: HTMGSSILCELLMRLPLPTSNKS*TQPGLL
Trigger: GAGAAGCCCAGGCTGAGTTCAGCTTTTGTTGGAAGT...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCAGTTGCACCAAGAATaGGAGTTGGGATCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPQLHQE*ELGSPR
Trigger: TCTTGGAGATCCCAACTCTCATTCTTGGTGCAACTG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp AATACAACGTCCTCATGCTATCTTAGCTGGGGGAAGGTCAGCCTCTTTGAGTTACCTTCCTTGCTTGCTTaGTTCCTTCCTTTCGTGAGG +
Preference number: 4 (lower is better)
Translates to: NTTSSCYLSWGKVSLFELPSLLA*FLPFVR
Trigger: CCTCACGAAAGGAAGGAAGCAAGCAAGCAAGGAAGG...TAACTCAAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285900.10
CDS-3UTR GCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCATGAAGCCCAGATTTaGAAGAATGTAGTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPHEAQI*KNVVVA
Trigger: GGCTACCACTACATTCTTGCAAATCTGGGCTTCATG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp ACTTCTCCAACAATGTCTATCTCCATCAGAGGTTTGGGCCAAGGAGTGGAGGGTGATATATCAATTCTCTaGCTCCGCAGGCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TSPTMSISIRGLGQGVEGDISIL*LRRLWK
Trigger: TTTCCAGAGCCTGCGGAGGCAGAGAATTGATATATC...ACCCTCCACTCCTTGGCCCAAACCTCTGATGGAGATAGACATTGTTGGAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGATATATCAATTCTCTaGCTCCGCAGGCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPDISIL*LRRLWK
Trigger: TTTCCAGAGCCTGCGGAGGCAGAGAATTGATATATC...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCACCTTCAAATCGCACCTaGTGCAGAGCTCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAPSNRT*CRALWM
Trigger: CATCCAGAGAGCTCTGCAGCAGGTGCGATTTGAAGG...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp AGCCCCAATCATACGTATATTGGAATACAACGTCCTCATGCTATCTTAGCTGGGGTGCTTGGCAATCTCTaGCGCCAGCTCTACACAGTA +
Preference number: 4 (lower is better)
Translates to: SPNHTYIGIQRPHAILAGVLGNL*RQLYTV
Trigger: TACTGTGTAGAGCTGGCGGCAGAGATTGCCAAGCAC...CCCAGCTAAGATAGCATGAGGACGTTGTATTCCAATATACGTATGATTGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGGTGCTTGGCAATCTCTaGCGCCAGCTCTACACAGTA +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWVLGNL*RQLYTV
Trigger: TACTGTGTAGAGCTGGCGGCAGAGATTGCCAAGCAC...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGAGCCACAGCCACATCTaGTCTTCCATAGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWSHSHI*SSIDQL
Trigger: GAGCTGGTCTATGGAAGAGCAGATGTGGCTGTGGCT...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCAAGCCACAGCCACATCTaGTCTTCCATAGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSSHSHI*SSIDQL
Trigger: GAGCTGGTCTATGGAAGAGCAGATGTGGCTGTGGCT...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGATGTAGAACACGCCTaGCACATTGCTGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIADVEHA*HIAEAQ
Trigger: CTGAGCCTCAGCAATGTGGCAGGCGTGTTCTACATC...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGGATGTAGAACACGCCTaGCACATTGCTGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWDVEHA*HIAEAQ
Trigger: CTGAGCCTCAGCAATGTGGCAGGCGTGTTCTACATC...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTGATGTAGAACACGCCTaGCACATTGCTGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSDVEHA*HIAEAQ
Trigger: CTGAGCCTCAGCAATGTGGCAGGCGTGTTCTACATC...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCATGCAAGGAATCGATTaGATGGACTTGGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPMQGID*MDLGKS
Trigger: TGACTTCCCCAAGTCCATGCAATCGATTCCTTGCAT...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGGGGCCTAACAGAACCTaGAAACCATGGATATTAGTA +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQGPNRT*KPWILV
Trigger: TACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCC...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGCCAACTCTTCCAAGATaGAGACTCCCTAATGGTGGG +
Preference number: 4 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKPTLPR*RLPNGG
Trigger: CCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCTATTGTTGGGGAAATTaGCACCTACTACCGCGCCTA +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPYCWGN*HLLPRL
Trigger: TAGGCGCGGTAGTAGGTGCCAATTTCCCCAACAATA...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000340592.9
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGCAGTCCACCCGTGTGTaGTCTCGAGCATCACTATTC +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWQSTRV*SRASLF
Trigger: GAATAGTGATGCTCGAGACCACACACGGGTGGACTG...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACAGTCCACCCGTGTGTaGTCTCGAGCATCACTATTC +
Preference number: 4 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSQSTRV*SRASLF
Trigger: GAATAGTGATGCTCGAGACCACACACGGGTGGACTG...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCACAGCTTGGGCATCGGTaGCTGCAGGGACAAACTTAT +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAQLGHR*LQGQTY
Trigger: ATAAGTTTGTCCCTGCAGCCACCGATGCCCAAGCTG...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATGGTCACTGGTTGTCTaGTCCCGTCCTTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAWSLVV*SRPSSN
Trigger: GTTTGAGGAAGGACGGGACCAGACAACCAGTGACCA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTGGTCACTGGTTGTCTaGTCCCGTCCTTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSWSLVV*SRPSSN
Trigger: GTTTGAGGAAGGACGGGACCAGACAACCAGTGACCA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGCATTGGACTGGTCACTaGTTGTCTGGTCCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWHWTGH*LSGPVL
Trigger: AAGGACGGGACCAGACAACCAGTGACCAGTCCAATG...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTACCTCCCACCTTCATaGTGTCACAGGGTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSYLPPS*CHRVSA
Trigger: AGCGGAAACCCTGTGACACCATGAAGGTGGGAGGTA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGCACTGCCAGGTTTACTaGATTTCTCAGGGCAGACCC +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWHCQVY*ISQGRP
Trigger: GGGTCTGCCCTGAGAAATCCAGTAAACCTGGCAGTG...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285900.10
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCAAGGAATCGATTGCATaGACTTGGGGAAGTCATGGC +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPKESIA*TWGSHG
Trigger: GCCATGACTTCCCCAAGTCCATGCAATCGATTCCTT...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGGAATCATCCTTCTTGTaGTCGCAGTGGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKESSFL*SQWLVV
Trigger: CACCACCAACCACTGCGACCACAAGAAGGATGATTC...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTCTCCATCAGAGGTTTaGGCCAAGGAGTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSSPSEV*AKEWRV
Trigger: TACCCTCCACTCCTTGGCCCAAACCTCTGATGGAGA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCAAGCTGAACTCAGCCTaGGCTTCTCTCTATAAACCC +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPKLNSA*ASLYKP
Trigger: GGGTTTATAGAGAGAAGCCCAGGCTGAGTTCAGCTT...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGAAAGCTAATGACACATaGCACGCACTGAATCATGCA +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQKANDT*HALNHA
Trigger: TGCATGATTCAGTGCGTGCCATGTGTCATTAGCTTT...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGCTGAAGGCAGGAGAGTaGAGAGACATAGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKLKAGE*RDIEMV
Trigger: CACCATCTCTATGTCTCTCCACTCTCCTGCCTTCAG...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTGTGGGCTCAGTAGCTaGAGAGGCATCTTACTAGGC +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSCGLSS*RGILLG
Trigger: GCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp GTAAGGAGAAGGAAAGGGCCTAACAGAACCTGCAAACCATGGATATTAGTAAGAAAGCAAGTTACTCCATaGCCACTCCAAGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: VRRRKGPNRTCKPWILVRKQVTP*PLQAAS
Trigger: GCTGGCGGCTTGGAGTGGCCATGGAGTAACTTGCTT...TCTTACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCCTTTCCTTCTCCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518783.1
CDS-3UTR TCA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCAGCTTCCTTCCTTTCGTaGGGTTTGTCTGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: HTMGSSILCELLMRLPLPASFLS*GLSVSL
Trigger: AAGGGAAACAGACAAACCTCACGAAAGGAAGGAAGC...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285900.10
CDS-3UTR TCA 90 bp GTTGATGTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGCTTCGGGGGCTCTGTaGGTTGCGACAAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: VDVKGLFPTLPRCRLPNGASGAL*VATKQI
Trigger: GATTTGCTTTGTCGCAACTCACAGAGCCCCCGAAGC...ACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAACATCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGATGTATGTTCTGTTCTaGACACTTGAATTATCGCCC +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQMYVLF*TLELSP
Trigger: GGGCGATAATTCAAGTGTTCAGAACAGAACATACAT...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGTCATTGCCCTCAAACTaGTTGGCGTTCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKSLPSN*LAFFLS
Trigger: GCTCAAGAAGAACGCCAATCAGTTTGAGGGCAATGA...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCATCATTGCCCTCAAACTaGTTGGCGTTCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: HTMGSSILCELLMRLPLPSLPSN*LAFFLS
Trigger: GCTCAAGAAGAACGCCAATCAGTTTGAGGGCAATGA...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGTCCGTATGGCTTCGTTaGTGGATTGCTGTGGGATCA +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWSVWLR*WIAVGS
Trigger: TGATCCCACAGCAATCCATCAACGAAGCCATACGGA...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTCAGGAAAACCTGTTaGATCATCCTTCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPFRKTC*IILLVV
Trigger: GACCACAAGAAGGATGATTCAACAGGTTTTCCTGAA...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAATCATTAGTGTTCCAGTaGCTCTACTCTCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKSLVFQ*LYSQRH
Trigger: GTGTCTCTGAGAGTAGAGTCACTGGAACACTAATGA...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp GAGAGTTGGGATCTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAACTCCAATCTGAAAACTaGAGAGGGGTGGGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: ESWDLQESYMSGILTSNKLQSEN*RGVGRE
Trigger: CTCCCTACCCACCCCTCTTCAGTTTTCAGATTGGAG...TTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAGATCCCAACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATTCAGGAGTCCTTCTCTaGCTGCACATCTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHSGVLL*LHICPC
Trigger: GCAGGGGCAGATGTGCAGTCAGAGAAGGACTCCTGA...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCACCACCTATGACCTATaGAATGGCTCTTCCACATTA +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPTTYDL*NGSSTL
Trigger: TAATGTGGAAGAGCCATTTCATAGGTCATAGGTGGT...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp GTAAGGAGAAGGAAAGGGCCTAACAGAACCTGCAAACCATGGATATTAGTAAGAACACATGGCACGCACTaGATCATGCACCTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: VRRRKGPNRTCKPWILVRTHGTH*IMHLGE
Trigger: CTCTCCTAGGTGCATGATTCAGTGCGTGCCATGTGT...TCTTACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCCTTTCCTTCTCCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATGGTGTGGGTCCACTaGGAGAATCCACAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHMVWVH*ENPQKS
Trigger: GCTTTTCTGTGGATTCTCTCAGTGGACCCACACCAT...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTATGGTGTGGGTCCACTaGGAGAATCCACAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSMVWVH*ENPQKS
Trigger: GCTTTTCTGTGGATTCTCTCAGTGGACCCACACCAT...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCAGAGGGTCCGGTTTCATaGACCATGACCACATTGACA +
Preference number: 4 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSEGPVS*TMTTLT
Trigger: TGTCAATGTGGTCATGGTTCATGAAACCGGACCCTC...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp AATACAACGTCCTCATGCTATCTTAGCTGGGGGAAGGTCAGCCTCTTTGAGTTACTGTTCTTTTCCTCCTaGAGTTCCTTCCTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: NTTSSCYLSWGKVSLFELLFFSS*SSFLAC
Trigger: GCAAGCAAGGAAGGAACTGCAGGAGGAAAAGAACAG...TAACTCAAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285900.10
CDS-3UTR GCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCGCATGTTCCTGTGACTaGTGGTTTGGAAATAATCCC +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPACSCD*WFGNNP
Trigger: GGGATTATTTCCAAACCAGCAGTCACAGGAACATGC...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCGGGGGCTCTGTGAGTTaGGACAAAGCAAATCTAAAA +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPGGSVS*DKANLK
Trigger: TTTTAGATTTGCTTTGTCGCAACTCACAGAGCCCCC...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAAGGGGGCTCTGTGAGTTaGGACAAAGCAAATCTAAAA +
Preference number: 4 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKGGSVS*DKANLK
Trigger: TTTTAGATTTGCTTTGTCGCAACTCACAGAGCCCCC...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTTGACTGCTGTCACCTaGCAGTTCTTCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSLTAVT*QFFSAA
Trigger: AGCTGCTGAGAAGAACTGGCAGGTGACAGCAGTCAA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCATTGACTGCTGTCACCTaGCAGTTCTTCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSLTAVT*QFFSAA
Trigger: AGCTGCTGAGAAGAACTGGCAGGTGACAGCAGTCAA...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTGTAGTGGTAGCCGATaGCATTCTTCTCTAGCTTTA +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPCSGSR*HSSLAL
Trigger: TAAAGCTAGAGAAGAATGGCATCGGCTACCACTACA...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTATTCTTCCACTGCTaGATGATCTTGGCCGGAATA +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPLFFHC*MILAGI
Trigger: TATTCCGGCCAAGATCATGCAGCAGTGGAAGAATAG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCGATATATCAATTCTCTaGCTCCGCAGGCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPDISIL*LRRLWK
Trigger: TTTCCAGAGCCTGCGGAGGCAGAGAATTGATATATC...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp GAGAGTTGGGATCTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAACCTTCAAATCGCACCTaGTGCAGAGCTCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: ESWDLQESYMSGILTSNKPSNRT*CRALWM
Trigger: CATCCAGAGAGCTCTGCAGCAGGTGCGATTTGAAGG...TTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAGATCCCAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCACCTCGTAACGGTCATTaGCCTCAAACTGATTGGCGT +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAPRNGH*PQTDWR
Trigger: ACGCCAATCAGTTTGAGGGCAATGACCGTTACGAGG...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTCCTCGTAACGGTCATTaGCCTCAAACTGATTGGCGT +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSPRNGH*PQTDWR
Trigger: ACGCCAATCAGTTTGAGGGCAATGACCGTTACGAGG...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGCCTCGTAACGGTCATTaGCCTCAAACTGATTGGCGT +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWPRNGH*PQTDWR
Trigger: ACGCCAATCAGTTTGAGGGCAATGACCGTTACGAGG...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCTCTCCACTGAATAAGTaGTTAAGCAGTGCCCCACTT +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPSPLNK*LSSAPL
Trigger: AAGTGGGGCACTGCTTAAGCACTTATTCAGTGGAGA...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGACCCTCATCCTGAGTTaGTTTTCACCTGTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKTLILS*FSPVFS
Trigger: GGAGAACACAGGTGAAAAGCAACTCAGGATGAGGGT...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACCAACTCTTCCAAGATaGAGACTCCCTAATGGTGGG +
Preference number: 4 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSPTLPR*RLPNGG
Trigger: CCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGTCTAGCTTTATAATCTaGCCCAAGATAGCATTGAGG +
Preference number: 4 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQSSFII*PKIALR
Trigger: CCTCAATGCTATCTTGGGCCAGATTATAAAGCTAGA...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp GTAAGGAGAAGGAAAGGGCCTAACAGAACCTGCAAACCATGGATATTAGTAAGACAGCTTGGGCATCGGTaGCTGCAGGGACAAACTTAT +
Preference number: 4 (lower is better)
Translates to: VRRRKGPNRTCKPWILVRQLGHR*LQGQTY
Trigger: ATAAGTTTGTCCCTGCAGCCACCGATGCCCAAGCTG...TCTTACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCCTTTCCTTCTCCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp GTAAGGAGAAGGAAAGGGCCTAACAGAACCTGCAAACCATGGATATTAGTAAGATGGTCACTGGTTGTCTaGTCCCGTCCTTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: VRRRKGPNRTCKPWILVRWSLVV*SRPSSN
Trigger: GTTTGAGGAAGGACGGGACCAGACAACCAGTGACCA...TCTTACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCCTTTCCTTCTCCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp GAGAGTTGGGATCTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAACATTGGACTGGTCACTaGTTGTCTGGTCCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: ESWDLQESYMSGILTSNKHWTGH*LSGPVL
Trigger: AAGGACGGGACCAGACAACCAGTGACCAGTCCAATG...TTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAGATCCCAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGACCAGACAGGGACCTaGGAGAAATGTCACATCCTT +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIADQTGT*EKCHIL
Trigger: AAGGATGTGACATTTCTCCCAGGTCCCTGTCTGGTC...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGGACCAGACAGGGACCTaGGAGAAATGTCACATCCTT +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWDQTGT*EKCHIL
Trigger: AAGGATGTGACATTTCTCCCAGGTCCCTGTCTGGTC...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGTTAAGGCAACCAGCATaGCTAGTCCAAGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWLRQPA*LVQVLR
Trigger: TCGGAGGACTTGGACTAGCCATGCTGGTTGCCTTAA...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCAACCCTTCATCCGCTTaGATTCACTACGGGATTTGT +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPNPSSA*IHYGIC
Trigger: ACAAATCCCGTAGTGAATCCAAGCGGATGAAGGGTT...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGGCATCCCTGAACTGTaGCTCATGCAAGGAATCGAT +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAGIPEL*LMQGID
Trigger: ATCGATTCCTTGCATGAGCCACAGTTCAGGGATGCC...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTGGTCGCAGTGGTTGGTaGTGGTTGCGTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSGRSGW*WLRFIL
Trigger: CAAAATGAAACGCAACCACCACCAACCACTGCGACC...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCATGTGGTCGCAGTGGTTaGTGGTGGTTGCGTTTCATT +
Preference number: 4 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSCGRSG*WWLRFI
Trigger: AATGAAACGCAACCACCACCAACCACTGCGACCACA...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTTCTTGTGGTCGCAGTaGTTGGTGGTGGTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSFLWSQ*LVVVAF
Trigger: AAACGCAACCACCACCAACCACTGCGACCACAAGAA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGGAATCATCCTTCTTGTaGTCGCAGTGGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWESSFL*SQWLVV
Trigger: CACCACCAACCACTGCGACCACAAGAAGGATGATTC...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp GTAAGGAGAAGGAAAGGGCCTAACAGAACCTGCAAACCATGGATATTAGTAAGAGAGTGGAGGGTAACATaGAGAGCCCCCATGGAGAAT +
Preference number: 4 (lower is better)
Translates to: VRRRKGPNRTCKPWILVREWRVT*RAPMEN
Trigger: ATTCTCCATGGGGGCTCTCCATGTTACCCTCCACTC...TCTTACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCCTTTCCTTCTCCTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCATCATGCTATCTTAGCTaGGGGAAGGTCAGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: HTMGSSILCELLMRLPLPSCYLS*GKVSLF
Trigger: AAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGA...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTCTCAAAGCTGTCGCTaGTGTTCACAATATCAATCT +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPSQSCR*CSQYQS
Trigger: AGATTGATATTGTGAACATCAGCGACAGCTTTGAGA...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATGGTTGTCAAAATGTTaGCTGCTGTCACCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAWLSKC*LLSPAS
Trigger: ACTGGCAGGTGACAGCAGTCAACATTTTGACAACCA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAATGGCGCCACTCTCCTTaGATTTGTTTAAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKWRHSP*ICLSQC
Trigger: ACATTGACTTAAACAAATTCAAGGAGAGTGGCGCCA...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGTCTGTTCTGAACACTTaGATTATCGCCCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWSVLNT*IIAPSL
Trigger: CAAGCTGGGGGCGATAATTCAAGTGTTCAGAACAGA...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACTCTGTTCTGAACACTTaGATTATCGCCCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHSVLNT*IIAPSL
Trigger: CAAGCTGGGGGCGATAATTCAAGTGTTCAGAACAGA...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCTTCTAGGATTGTTGTaGCGATGTATGTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPLLGLL*RCMFCS
Trigger: AGAACAGAACATACATCGTCACAACAATCCTAGAAG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCGATTGGCGTTCTTCTTaGGCATCACATAAGGATCTT +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPDWRSS*ASHKDL
Trigger: AAGATCCTTATGTGATGCTCAAGAAGAACGCCAATC...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTCATTGCCCTCAAACTaGTTGGCGTTCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSSLPSN*LAFFLS
Trigger: GCTCAAGAAGAACGCCAATCAGTTTGAGGGCAATGA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATCATTGCCCTCAAACTaGTTGGCGTTCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIASLPSN*LAFFLS
Trigger: GCTCAAGAAGAACGCCAATCAGTTTGAGGGCAATGA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCACGTATTTTCCATCACTaGCAATCTCCAGACGGTAGG +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIARIFHH*QSPDGR
Trigger: CCTACCGTCTGGAGATTGTCAGTGATGGAAAATACG...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp GTAAGGAGAAGGAAAGGGCCTAACAGAACCTGCAAACCATGGATATTAGTAAGATCCGTATGGCTTCGTTaGTGGATTGCTGTGGGATCA +
Preference number: 4 (lower is better)
Translates to: VRRRKGPNRTCKPWILVRSVWLR*WIAVGS
Trigger: TGATCCCACAGCAATCCATCAACGAAGCCATACGGA...TCTTACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCCTTTCCTTCTCCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCTTCAGGAAAACCTGTTaGATCATCCTTCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPFRKTC*IILLVV
Trigger: GACCACAAGAAGGATGATTCAACAGGTTTTCCTGAA...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCACCACCTATGACCTATaGAATGGCTCTTCCACATTA +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPTTYDL*NGSSTL
Trigger: TAATGTGGAAGAGCCATTTCATAGGTCATAGGTGGT...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAAATACCATACCACCTATaGCCTATGAAATGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKIPYHL*PMKWLF
Trigger: GAAGAGCCATTTCATAGGTCATAGGTGGTATGGTAT...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGGAAGGTCAGCCTCTTTaGGTTAGAACCTGGGATCAA +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWEGQPL*VRTWDQ
Trigger: TTGATCCCAGGTTCTAACTCAAAGAGGCTGACCTTC...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATATGCACCTAGGAGAGTaGCTGCTGGAGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHMHLGE*LLESWK
Trigger: CTTCCAGCTCTCCAGCAGTCACTCTCCTAGGTGCAT...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTAGCAATCATCCATCTTaGGGGTCCGGTTTCATGAAC +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSSNHPS*GSGFMN
Trigger: GTTCATGAAACCGGACCCTCAAGATGGATGATTGCT...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCATCTGCAGTGGTAGGCTaGAGGCTGAGAAAAATCTTG +
Preference number: 4 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSSAVVG*RLRKIL
Trigger: CAAGATTTTTCTCAGCCTTCAGCCTACCACTGCAGA...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCAGCATGTTCCTGTGACTaGTGGTTTGGAAATAATCCC +
Preference number: 4 (lower is better)
Translates to: HTMGSSILCELLMRLPLPACSCD*WFGNNP
Trigger: GGGATTATTTCCAAACCAGCAGTCACAGGAACATGC...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp AATACAACGTCCTCATGCTATCTTAGCTGGGGGAAGGTCAGCCTCTTTGAGTTACATGAAGCCCAGATTTaGAAGAATGTAGTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: NTTSSCYLSWGKVSLFELHEAQI*KNVVVA
Trigger: GGCTACCACTACATTCTTGCAAATCTGGGCTTCATG...TAACTCAAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp AATACAACGTCCTCATGCTATCTTAGCTGGGGGAAGGTCAGCCTCTTTGAGTTATCTCCACTGAATAAGTaGTTAAGCAGTGCCCCACTT +
Preference number: 4 (lower is better)
Translates to: NTTSSCYLSWGKVSLFELSPLNK*LSSAPL
Trigger: AAGTGGGGCACTGCTTAAGCACTTATTCAGTGGAGA...TAACTCAAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCATCCACAATGGGTTCCTaGTTAGATGCCAGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSSTMGS*LDARQR
Trigger: TCTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGA...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGAATACAACGTCCTCATaGTATCTTAGCTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKNTTSS*YLSWGK
Trigger: CTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATT...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTATTGTTGGGGAAATTaGCACCTACTACCGCGCCTA +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSYCWGN*HLLPRL
Trigger: TAGGCGCGGTAGTAGGTGCCAATTTCCCCAACAATA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000340592.9
CDS-3UTR CCA 90 bp AGCCCCAATCATACGTATATTGGAATACAACGTCCTCATGCTATCTTAGCTGGGTGTTCCTGTGACTGCTaGTTTGGAAATAATCCCCCG +
Preference number: 4 (lower is better)
Translates to: SPNHTYIGIQRPHAILAGCSCDC*FGNNPP
Trigger: CGGGGGATTATTTCCAAACCAGCAGTCACAGGAACA...CCCAGCTAAGATAGCATGAGGACGTTGTATTCCAATATACGTATGATTGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285900.10
CDS-3UTR CCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATGTTCCTGTGACTGCTaGTTTGGAAATAATCCCCCG +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIACSCDC*FGNNPP
Trigger: CGGGGGATTATTTCCAAACCAGCAGTCACAGGAACA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000340592.9
CDS-3UTR CCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTCTAGCTTTATAATCTaGCCCAAGATAGCATTGAGG +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPSSFII*PKIALR
Trigger: CCTCAATGCTATCTTGGGCCAGATTATAAAGCTAGA...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp GAGAGTTGGGATCTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAACCAAACTCATTGGACTaGTCACTGGTTGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ESWDLQESYMSGILTSNKPNSLD*SLVVWS
Trigger: GGACCAGACAACCAGTGACCAGTCCAATGAGTTTGG...TTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAGATCCCAACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCATATCCCAAACTCATTaGACTGGTCACTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPISQTH*TGHWLS
Trigger: AGACAACCAGTGACCAGTCCAATGAGTTTGGGATAT...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGAAGGAATCGATTGCATaGACTTGGGGAAGTCATGGC +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWKESIA*TWGSHG
Trigger: GCCATGACTTCCCCAAGTCCATGCAATCGATTCCTT...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAAAGGAATCGATTGCATaGACTTGGGGAAGTCATGGC +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAKESIA*TWGSHG
Trigger: GCCATGACTTCCCCAAGTCCATGCAATCGATTCCTT...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTCATGCTATCTTAGCTaGGGGAAGGTCAGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSSCYLS*GKVSLF
Trigger: AAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGAAGGATTCTTTGCTATaGCTGAAGGCAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWKDSLL*LKAGEW
Trigger: CCACTCTCCTGCCTTCAGCCATAGCAAAGAATCCTT...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCTCTCAAAGCTGTCGCTaGTGTTCACAATATCAATCT +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPSQSCR*CSQYQS
Trigger: AGATTGATATTGTGAACATCAGCGACAGCTTTGAGA...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTAGGAGGTCAGCATGTTaGCAGTCCTACGTTCATAAA +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSRRSAC*QSYVHK
Trigger: TTTATGAACGTAGGACTGTCAACATGCTGACCTCCT...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGAGGAGGTCAGCATGTTaGCAGTCCTACGTTCATAAA +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWRRSAC*QSYVHK
Trigger: TTTATGAACGTAGGACTGTCAACATGCTGACCTCCT...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp GAGAGTTGGGATCTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAATGGTTGTCAAAATGTTaGCTGCTGTCACCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: ESWDLQESYMSGILTSNKWLSKC*LLSPAS
Trigger: ACTGGCAGGTGACAGCAGTCAACATTTTGACAACCA...TTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAGATCCCAACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCATGTATGTTCTGTTCTaGACACTTGAATTATCGCCC +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPMYVLF*TLELSP
Trigger: GGGCGATAATTCAAGTGTTCAGAACAGAACATACAT...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp AATACAACGTCCTCATGCTATCTTAGCTGGGGGAAGGTCAGCCTCTTTGAGTTAGATTGGCGTTCTTCTTaGGCATCACATAAGGATCTT +
Preference number: 4 (lower is better)
Translates to: NTTSSCYLSWGKVSLFELDWRSS*ASHKDL
Trigger: AAGATCCTTATGTGATGCTCAAGAAGAACGCCAATC...TAACTCAAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCAGATTGGCGTTCTTCTTaGGCATCACATAAGGATCTT +
Preference number: 4 (lower is better)
Translates to: HTMGSSILCELLMRLPLPDWRSS*ASHKDL
Trigger: AAGATCCTTATGTGATGCTCAAGAAGAACGCCAATC...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp GTTGATGTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTTGTTGTTTTTGGCACTaGAGGGTTTGGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: VDVKGLFPTLPRCRLPNGCCFWH*RVWDGA
Trigger: AGCCCCATCCCAAACCCTTCAGTGCCAAAAACAACA...ACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAACATCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCATCATTAGTGTTCCAGTaGCTCTACTCTCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSSLVFQ*LYSQRH
Trigger: GTGTCTCTGAGAGTAGAGTCACTGGAACACTAATGA...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTCATTAGTGTTCCAGTaGCTCTACTCTCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSSLVFQ*LYSQRH
Trigger: GTGTCTCTGAGAGTAGAGTCACTGGAACACTAATGA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGTCATTAGTGTTCCAGTaGCTCTACTCTCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWSLVFQ*LYSQRH
Trigger: GTGTCTCTGAGAGTAGAGTCACTGGAACACTAATGA...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATCTCCAATCTGAAAACTaGAGAGGGGTGGGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHLQSEN*RGVGRE
Trigger: CTCCCTACCCACCCCTCTTCAGTTTTCAGATTGGAG...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTGGGGGCTCTGTGAGTTaGGACAAAGCAAATCTAAAA +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSGGSVS*DKANLK
Trigger: TTTTAGATTTGCTTTGTCGCAACTCACAGAGCCCCC...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGTGTCAAAATGTTGACTaGTGTCACCTGCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKCQNVD*CHLPVL
Trigger: AAGAACTGGCAGGTGACAGCAGTCAACATTTTGACA...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTCATGAAGCCCAGATTTaGAAGAATGTAGTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSHEAQI*KNVVVA
Trigger: GGCTACCACTACATTCTTGCAAATCTGGGCTTCATG...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGCTATTCTTCCACTGCTaGATGATCTTGGCCGGAATA +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWLFFHC*MILAGI
Trigger: TATTCCGGCCAAGATCATGCAGCAGTGGAAGAATAG...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCACTATTCTTCCACTGCTaGATGATCTTGGCCGGAATA +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIALFFHC*MILAGI
Trigger: TATTCCGGCCAAGATCATGCAGCAGTGGAAGAATAG...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp GAGAGTTGGGATCTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAATCACTATTCTTCCACTaGTGCATGATCTTGGCCGGA +
Preference number: 4 (lower is better)
Translates to: ESWDLQESYMSGILTSNKSLFFH*CMILAG
Trigger: TCCGGCCAAGATCATGCAGCAGTGGAAGAATAGTGA...TTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAGATCCCAACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCAACCAATCTTTCGGATaGCGTCATGTTTCATTTCAA +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPNQSFG*RHVSFQ
Trigger: TTGAAATGAAACATGACGGCATCCGAAAGATTGGTT...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp AGCCCCAATCATACGTATATTGGAATACAACGTCCTCATGCTATCTTAGCTGGGATGCAAGGAATCGATTaGATGGACTTGGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SPNHTYIGIQRPHAILAGMQGID*MDLGKS
Trigger: TGACTTCCCCAAGTCCATGCAATCGATTCCTTGCAT...CCCAGCTAAGATAGCATGAGGACGTTGTATTCCAATATACGTATGATTGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGATGCAAGGAATCGATTaGATGGACTTGGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWMQGID*MDLGKS
Trigger: TGACTTCCCCAAGTCCATGCAATCGATTCCTTGCAT...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp AATACAACGTCCTCATGCTATCTTAGCTGGGGGAAGGTCAGCCTCTTTGAGTTAGAAGGACAAACTGATTaGATGTATCAACGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: NTTSSCYLSWGKVSLFELEGQTD*MYQRES
Trigger: GCTTTCCCGTTGATACATCCAATCAGTTTGTCCTTC...TAACTCAAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATCAGTCCACCCGTGTGTaGTCTCGAGCATCACTATTC +
Preference number: 4 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHQSTRV*SRASLF
Trigger: GAATAGTGATGCTCGAGACCACACACGGGTGGACTG...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATAGCGCAGAGGTGTACTTaGGTCTCTTCCAGTCCACCC +
Preference number: 4 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRIAQRCT*VSSSPP
Trigger: GGGTGGACTGGAAGAGACCCAAGTACACCTCTGCGC...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAAACCCTTCATCCGCTTaGATTCACTACGGGATTTGT +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIANPSSA*IHYGIC
Trigger: ACAAATCCCGTAGTGAATCCAAGCGGATGAAGGGTT...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCAAACCCTTCATCCGCTTaGATTCACTACGGGATTTGT +
Preference number: 4 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSNPSSA*IHYGIC
Trigger: ACAAATCCCGTAGTGAATCCAAGCGGATGAAGGGTT...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAAGTTGATGGATTGCTGTaGGATCAAACAAAAACCCTT +
Preference number: 4 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKVDGLL*DQTKTL
Trigger: AAGGGTTTTTGTTTGATCCCACAGCAATCCATCAAC...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATTCTCCATCAGAGGTTTaGGCCAAGGAGTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHSPSEV*AKEWRV
Trigger: TACCCTCCACTCCTTGGCCCAAACCTCTGATGGAGA...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGTGGGCAATATCTCCCTaGCTGTTATCTCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWWAISP*LLSLPK
Trigger: TTTGGGAAGAGATAACAGCCAGGGAGATATTGCCCA...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCAATCATACGTATATTaGAATACAACGTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPQSYVY*NTTSSC
Trigger: GCATGAGGACGTTGTATTCCAATATACGTATGATTG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp GTAAGGAGAAGGAAAGGGCCTAACAGAACCTGCAAACCATGGATATTAGTAAGAAAGGATTCTTTGCTATaGCTGAAGGCAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: VRRRKGPNRTCKPWILVRKDSLL*LKAGEW
Trigger: CCACTCTCCTGCCTTCAGCCATAGCAAAGAATCCTT...TCTTACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCCTTTCCTTCTCCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGTGTTCCTGTGACTGCTaGTTTGGAAATAATCCCCAC +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWCSCDC*FGNNPH
Trigger: GTGGGGATTATTTCCAAACCAGCAGTCACAGGAACA...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518783.1
CDS-3UTR TCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATGGCGCCACTCTCCTTaGATTTGTTTAAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAWRHSP*ICLSQC
Trigger: ACATTGACTTAAACAAATTCAAGGAGAGTGGCGCCA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGTGGCGCCACTCTCCTTaGATTTGTTTAAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWWRHSP*ICLSQC
Trigger: ACATTGACTTAAACAAATTCAAGGAGAGTGGCGCCA...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp AATACAACGTCCTCATGCTATCTTAGCTGGGGGAAGGTCAGCCTCTTTGAGTTAATGTATGTTCTGTTCTaGACACTTGAATTATCGCCC +
Preference number: 4 (lower is better)
Translates to: NTTSSCYLSWGKVSLFELMYVLF*TLELSP
Trigger: GGGCGATAATTCAAGTGTTCAGAACAGAACATACAT...TAACTCAAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATTCAGGAAAACCTGTTaGATCATCCTTCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAFRKTC*IILLVV
Trigger: GACCACAAGAAGGATGATTCAACAGGTTTTCCTGAA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGTTCAGGAAAACCTGTTaGATCATCCTTCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWFRKTC*IILLVV
Trigger: GACCACAAGAAGGATGATTCAACAGGTTTTCCTGAA...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp GTTGATGTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTCAGTTGCACCAAGAATaGGAGTTGGGATCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: VDVKGLFPTLPRCRLPNGQLHQE*ELGSPR
Trigger: TCTTGGAGATCCCAACTCTCATTCTTGGTGCAACTG...ACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAACATCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCACTGCATATTCCTTTTTaGATTGGCGAAAAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: HTMGSSILCELLMRLPLPLHIPF*IGEKEA
Trigger: GGCTTCTTTTTCGCCAATGCAAAAAGGAATATGCAG...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000285900.10
CDS-3UTR GCA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATAGTATCCAGGACTTTCTaGAGGACGGATAAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRIVSRTF*RTDKPR
Trigger: CCGGGGCTTATCCGTCCTGCAGAAAGTCCTGGATAC...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATGTCAAAATGTTGACTaGTGTCACCTGCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIACQNVD*CHLPVL
Trigger: AAGAACTGGCAGGTGACAGCAGTCAACATTTTGACA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTGTCAAAATGTTGACTaGTGTCACCTGCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSCQNVD*CHLPVL
Trigger: AAGAACTGGCAGGTGACAGCAGTCAACATTTTGACA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTGTAGTGGTAGCCGATaGCATTCTTCTCTAGCTTTA +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSCSGSR*HSSLAL
Trigger: TAAAGCTAGAGAAGAATGGCATCGGCTACCACTACA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp GAGAGTTGGGATCTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAAATGCAAGGAATCGATTaGATGGACTTGGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: ESWDLQESYMSGILTSNKMQGID*MDLGKS
Trigger: TGACTTCCCCAAGTCCATGCAATCGATTCCTTGCAT...TTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAGATCCCAACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTGGGCCTAACAGAACCTaGAAACCATGGATATTAGTA +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSGPNRT*KPWILV
Trigger: TACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCC...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCAACTGCAGCACATGTATaGCCGACAAAATATCAATTG +
Preference number: 4 (lower is better)
Translates to: HTMGSSILCELLMRLPLPTAAHV*PTKYQL
Trigger: CAATTGATATTTTGTCGGGCATACATGTGCTGCAGT...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518783.1
CDS-3UTR CCA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACGATCTGGATATTGTTaGGGAAATTGGCACCTACTA +
Preference number: 4 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSRSGYC*GNWHLL
Trigger: TAGTAGGTGCCAATTTCCCCAACAATATCCAGATCG...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285900.10
CDS-3UTR CCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGAAGGACAAACTGATTaGATGTATCAACGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAEGQTD*MYQRES
Trigger: GCTTTCCCGTTGATACATCCAATCAGTTTGTCCTTC...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTGAAGGACAAACTGATTaGATGTATCAACGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSEGQTD*MYQRES
Trigger: GCTTTCCCGTTGATACATCCAATCAGTTTGTCCTTC...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGATATCCCAAACTCATTaGACTGGTCACTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWISQTH*TGHWLS
Trigger: AGACAACCAGTGACCAGTCCAATGAGTTTGGGATAT...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAATATCCCAAACTCATTaGACTGGTCACTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAISQTH*TGHWLS
Trigger: AGACAACCAGTGACCAGTCCAATGAGTTTGGGATAT...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATGGCATCCCTGAACTGTaGCTCATGCAAGGAATCGAT +
Preference number: 4 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHGIPEL*LMQGID
Trigger: ATCGATTCCTTGCATGAGCCACAGTTCAGGGATGCC...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp GTTGATGTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTTCCCAAAATTCTGCTTaGTTTAGGAGGCCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: VDVKGLFPTLPRCRLPNGSQNSA*FRRPSA
Trigger: GGCACTTGGCCTCCTAAACCAAGCAGAATTTTGGGA...ACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAACATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGAAAGCTAATGACACATaGCACGCACTGAATCATGCA +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWKANDT*HALNHA
Trigger: TGCATGATTCAGTGCGTGCCATGTGTCATTAGCTTT...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGTGTTCCTGTGACTGCTaGTTTGGAAATAATCCCCAT +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWCSCDC*FGNNPH
Trigger: ATGGGGATTATTTCCAAACCAGCAGTCACAGGAACA...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521843.6
CDS-3UTR TCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATCTCAAAGCTGTCGCTaGTGTTCACAATATCAATCT +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIASQSCR*CSQYQS
Trigger: AGATTGATATTGTGAACATCAGCGACAGCTTTGAGA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATTGGTTGTCAAAATGTTaGCTGCTGTCACCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHWLSKC*LLSPAS
Trigger: ACTGGCAGGTGACAGCAGTCAACATTTTGACAACCA...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATATTCTTCTCCAGGTCCTaGAAGAGCATCCGGTATCCC +
Preference number: 4 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRIFFSRS*KSIRYP
Trigger: GGGATACCGGATGCTCTTTCAGGACCTGGAGAAGAA...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGATGTATGTTCTGTTCTaGACACTTGAATTATCGCCC +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWMYVLF*TLELSP
Trigger: GGGCGATAATTCAAGTGTTCAGAACAGAACATACAT...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTCTTCTAGGATTGTTGTaGCGATGTATGTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSLLGLL*RCMFCS
Trigger: AGAACAGAACATACATCGTCACAACAATCCTAGAAG...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR TCA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACCTTCTAGGATTGTTGTaGCGATGTATGTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHLLGLL*RCMFCS
Trigger: AGAACAGAACATACATCGTCACAACAATCCTAGAAG...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATCGTATTTTCCATCACTaGCAATCTCCAGACGGTAGG +
Preference number: 4 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHRIFHH*QSPDGR
Trigger: CCTACCGTCTGGAGATTGTCAGTGATGGAAAATACG...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCACTGCATATTCCTTTTTaGATTGGCGAAAAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIALHIPF*IGEKEA
Trigger: GGCTTCTTTTTCGCCAATGCAAAAAGGAATATGCAG...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000340592.9
CDS-3UTR GCA 90 bp GAGAGTTGGGATCTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAATGTCAAAATGTTGACTaGTGTCACCTGCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: ESWDLQESYMSGILTSNKCQNVD*CHLPVL
Trigger: AAGAACTGGCAGGTGACAGCAGTCAACATTTTGACA...TTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAGATCCCAACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATACCTTCAAATCGCACCTaGTGCAGAGCTCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRIPSNRT*CRALWM
Trigger: CATCCAGAGAGCTCTGCAGCAGGTGCGATTTGAAGG...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCAAACCAATCTTTCGGATaGCGTCATGTTTCATTTCAA +
Preference number: 4 (lower is better)
Translates to: HTMGSSILCELLMRLPLPNQSFG*RHVSFQ
Trigger: TTGAAATGAAACATGACGGCATCCGAAAGATTGGTT...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTATTCCTTTTTGCATTaGCGAAAAAGAAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSYSFLH*RKRSPG
Trigger: ACCTGGGCTTCTTTTTCGCCAATGCAAAAAGGAATA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000340592.9
CDS-3UTR CCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGAATAATCCCCCGATCTaGATATTGTTGGGGAAATTG +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWNNPPI*ILLGKL
Trigger: CAATTTCCCCAACAATATCCAGATCGGGGGATTATT...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000340592.9
CDS-3UTR CCA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCCCAAACTCATAAATaGTTTGGAGAAATCTATAAC +
Preference number: 4 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPPQTHK*FGEIYN
Trigger: GTTATAGATTTCTCCAAACCATTTATGAGTTTGGGG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp CTTAATCCATCTCCCTATACTCCTTCAATTATTTCCTTGGTTATCTCACTTTCTTGGTCACTGGTTGTCTaGTCCCGTCCTTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: LNPSPYTPSIISLVISLSWSLVV*SRPSSN
Trigger: GTTTGAGGAAGGACGGGACCAGACAACCAGTGACCA...AGAAAGTGAGATAACCAAGGAAATAATTGAAGGAGTATAGGGAGATGGATTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATACACTGCCAGGTTTACTaGATTTCTCAGGGCAGACCC +
Preference number: 4 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRIHCQVY*ISQGRP
Trigger: GGGTCTGCCCTGAGAAATCCAGTAAACCTGGCAGTG...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTGTTGATGGATTGCTGTaGGATCAAACAAAAACCCTT +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSVDGLL*DQTKTL
Trigger: AAGGGTTTTTGTTTGATCCCACAGCAATCCATCAAC...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp AGCCCCAATCATACGTATATTGGAATACAACGTCCTCATGCTATCTTAGCTGGGGTTGATGGATTGCTGTaGGATCAAACAAAAACCCTT +
Preference number: 4 (lower is better)
Translates to: SPNHTYIGIQRPHAILAGVDGLL*DQTKTL
Trigger: AAGGGTTTTTGTTTGATCCCACAGCAATCCATCAAC...CCCAGCTAAGATAGCATGAGGACGTTGTATTCCAATATACGTATGATTGGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTTGATGGATTGCTGTaGGATCAAACAAAAACCCTT +
Preference number: 4 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAVDGLL*DQTKTL
Trigger: AAGGGTTTTTGTTTGATCCCACAGCAATCCATCAAC...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CCA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATAAGCTGAACTCAGCCTaGGCTTCTCTCTATAAACCC +
Preference number: 4 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHKLNSA*ASLYKP
Trigger: GGGTTTATAGAGAGAAGCCCAGGCTGAGTTCAGCTT...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp GAGAGTTGGGATCTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAACCTAGCAGAGAAAATTaGATAGAAGTAGGGGGTAAG +
Preference number: 4 (lower is better)
Translates to: ESWDLQESYMSGILTSNKPSREN*IEVGGK
Trigger: CTTACCCCCTACTTCTATCCAATTTTCTCTGCTAGG...TTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAGATCCCAACTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATAGCACCTACCCCTAGGTaGGCTCCAAAACCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRIAPTPR*APKPLA
Trigger: TGCTAAAGGTTTTGGAGCCCACCTAGGGGTAGGTGC...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATAGGAGGTCAGCATGTTaGCAGTCCTACGTTCATAAA +
Preference number: 4 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHRRSAC*QSYVHK
Trigger: TTTATGAACGTAGGACTGTCAACATGCTGACCTCCT...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CTTAATCCATCTCCCTATACTCCTTCAATTATTTCCTTGGTTATCTCACTTTCTTGTTGTTTTTGGCACTaGAGGGTTTGGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: LNPSPYTPSIISLVISLSCCFWH*RVWDGA
Trigger: AGCCCCATCCCAAACCCTTCAGTGCCAAAAACAACA...AGAAAGTGAGATAACCAAGGAAATAATTGAAGGAGTATAGGGAGATGGATTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp GTTGATGTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTATACCATACCACCTATaGCCTATGAAATGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VDVKGLFPTLPRCRLPNGIPYHL*PMKWLF
Trigger: GAAGAGCCATTTCATAGGTCATAGGTGGTATGGTAT...ACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAACATCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATGATATATCAATTCTCTaGCTCCGCAGGCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHDISIL*LRRLWK
Trigger: TTTCCAGAGCCTGCGGAGGCAGAGAATTGATATATC...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGAACCAATCTTTCGGATaGCGTCATGTTTCATTTCAA +
Preference number: 4 (lower is better)
Translates to: SILQENLLNHPSCGRSGWNQSFG*RHVSFQ
Trigger: TTGAAATGAAACATGACGGCATCCGAAAGATTGGTT...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTAACCAATCTTTCGGATaGCGTCATGTTTCATTTCAA +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSNQSFG*RHVSFQ
Trigger: TTGAAATGAAACATGACGGCATCCGAAAGATTGGTT...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATAATACAACGTCCTCATaGTATCTTAGCTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHNTTSS*YLSWGK
Trigger: CTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATT...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp GTTGATGTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGAAGGACAAACTGATTaGATGTATCAACGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: VDVKGLFPTLPRCRLPNGEGQTD*MYQRES
Trigger: GCTTTCCCGTTGATACATCCAATCAGTTTGTCCTTC...ACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAACATCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGCCCCAAACTCATAAATaGTTTGGAGAAATCTATAAC +
Preference number: 4 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKPQTHK*FGEIYN
Trigger: GTTATAGATTTCTCCAAACCATTTATGAGTTTGGGG...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATAGACCAGACAGGGACCTaGGAGAAATGTCACATCCTT +
Preference number: 4 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRIDQTGT*EKCHIL
Trigger: AAGGATGTGACATTTCTCCCAGGTCCCTGTCTGGTC...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATATTAAGGCAACCAGCATaGCTAGTCCAAGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRILRQPA*LVQVLR
Trigger: TCGGAGGACTTGGACTAGCCATGCTGGTTGCCTTAA...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CTTAATCCATCTCCCTATACTCCTTCAATTATTTCCTTGGTTATCTCACTTTCTGGTCGCAGTGGTTGGTaGTGGTTGCGTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: LNPSPYTPSIISLVISLSGRSGW*WLRFIL
Trigger: CAAAATGAAACGCAACCACCACCAACCACTGCGACC...AGAAAGTGAGATAACCAAGGAAATAATTGAAGGAGTATAGGGAGATGGATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATAAGCAATCATCCATCTTaGGGGTCCGGTTTCATGAAC +
Preference number: 4 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRISNHPS*GSGFMN
Trigger: GTTCATGAAACCGGACCCTCAAGATGGATGATTGCT...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR TCA 90 bp CTTAATCCATCTCCCTATACTCCTTCAATTATTTCCTTGGTTATCTCACTTTCTTCTGCAGTGGTAGGCTaGAGGCTGAGAAAAATCTTG +
Preference number: 4 (lower is better)
Translates to: LNPSPYTPSIISLVISLSSAVVG*RLRKIL
Trigger: CAAGATTTTTCTCAGCCTTCAGCCTACCACTGCAGA...AGAAAGTGAGATAACCAAGGAAATAATTGAAGGAGTATAGGGAGATGGATTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATAACCCTCATCCTGAGTTaGTTTTCACCTGTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRITLILS*FSPVFS
Trigger: GGAGAACACAGGTGAAAAGCAACTCAGGATGAGGGT...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACCCCCAAACTCATAAATaGTTTGGAGAAATCTATAAC +
Preference number: 4 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHPQTHK*FGEIYN
Trigger: GTTATAGATTTCTCCAAACCATTTATGAGTTTGGGG...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTCCCCAAACTCATAAATaGTTTGGAGAAATCTATAAC +
Preference number: 4 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSPQTHK*FGEIYN
Trigger: GTTATAGATTTCTCCAAACCATTTATGAGTTTGGGG...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR GCA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATAGCATGTTCCTGTGACTaGTGGTTTGGAAATAATCCC +
Preference number: 4 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRIACSCD*WFGNNP
Trigger: GGGATTATTTCCAAACCAGCAGTCACAGGAACATGC...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR GCA 90 bp CTTAATCCATCTCCCTATACTCCTTCAATTATTTCCTTGGTTATCTCACTTTCTCATGAAGCCCAGATTTaGAAGAATGTAGTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: LNPSPYTPSIISLVISLSHEAQI*KNVVVA
Trigger: GGCTACCACTACATTCTTGCAAATCTGGGCTTCATG...AGAAAGTGAGATAACCAAGGAAATAATTGAAGGAGTATAGGGAGATGGATTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp GTTGATGTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTCAATCATACGTATATTaGAATACAACGTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: VDVKGLFPTLPRCRLPNGQSYVY*NTTSSC
Trigger: GCATGAGGACGTTGTATTCCAATATACGTATGATTG...ACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAACATCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CCA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATATATTCCTTTTTGCATTaGCGAAAAAGAAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRIYSFLH*RKRSPG
Trigger: ACCTGGGCTTCTTTTTCGCCAATGCAAAAAGGAATA...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000285900.10
CDS-3UTR CCA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATATCTAGCTTTATAATCTaGCCCAAGATAGCATTGAGG +
Preference number: 4 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRISSFII*PKIALR
Trigger: CCTCAATGCTATCTTGGGCCAGATTATAAAGCTAGA...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
3UTR CAA 72 bp TTAATGAAAGCCAGAACTGTTAAGTATGGATTCCTGTaGAGAAAAATGTCAGTCTCTTTCAGAGTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: LMKARTVKYGFL*RKMSVSFRVFP
Trigger: TGGGAAAACTCTGAAAGAGACTGACATTTTTCTCAACAGGAATCCATACTTAACAGTTCTGGCTTTCATTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS TCA 90 bp GGCTCATGCAAGGAATCGATTGCATGGACTTGGGGAAGTCATGGCTaGCCACCCGACCATTCTCTCCACTGCCGCCGCTGCTGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: GSCKESIAWTWGSHG*PPDHSLHCRRCWLL
Trigger: CAGGAGCCAGCAGCGGCGGCAGTGGAGAGAATGGTCGGGTGGTCAGCCATGACTTCCCCAAGTCCATGCAATCGATTCCTTGCATGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS CCA 90 bp CTGTGGCTCATGCAAGGAATCGATTGCATGGACTTGGGGAAGTCATaGCTGACCACCCGACCATTCTCTCCACTGCCGCCGCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LWLMQGIDCMDLGKS*LTTRPFSPLPPLLA
Trigger: AGCCAGCAGCGGCGGCAGTGGAGAGAATGGTCGGGTGGTCAGCCATGACTTCCCCAAGTCCATGCAATCGATTCCTTGCATGAGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGCTCCTGCCCCGCTGTaGCGGGGGAGGGTCGATGTC +
Preference number: 5 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPAPAPL*RGRVDV
Trigger: GACATCGACCCTCCCCCGCAACAGCGGGGCAGGAGC...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS GCA 90 bp GAGCCACAGCCACATCTGCTCTTCCATAGACCAGCTCTCCCACCATaGCATTCCAGGCCTTCGTGTCAGGGTCTCGGGCTCCGTATTTTC +
Preference number: 5 (lower is better)
Translates to: EPQPHLLFHRPALPP*HSRPSCQGLGLRIF
Trigger: GAAAATACGGAGCCCGAGACCCTGACACGAAGGCCTGGAATGGCATGGTGGGAGAGCTGGTCTATGGAAGAGCAGATGTGGCTGTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCGCTCCTGCCCCGCTGTaGCGGGGGAGGGTCGATGTC +
Preference number: 5 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPAPAPL*RGRVDV
Trigger: GACATCGACCCTCCCCCGCAACAGCGGGGCAGGAGC...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS TCA 90 bp TCCAGGCCTTCGTGTCAGGGTCTCGGGCTCCGTATTTTCCATCACTaGCAATCTCCAGACGGTAGGAGTAGCCCACGTGCTTGGCAATCT +
Preference number: 5 (lower is better)
Translates to: SRPSCQGLGLRIFHH*QSPDGRSSPRAWQS
Trigger: AGATTGCCAAGCACGTGGGCTACTCCTACCGTCTGGAGATTGTCAGTGATGGAAAATACGGAGCCCGAGACCCTGACACGAAGGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS GCA 90 bp GCTCCCAAGGGCATCCCTGAACTGTGGCTCATGCAAGGAATCGATTaGATGGACTTGGGGAAGTCATGGCTGACCACCCGACCATTCTCT +
Preference number: 5 (lower is better)
Translates to: APKGIPELWLMQGID*MDLGKSWLTTRPFS
Trigger: AGAGAATGGTCGGGTGGTCAGCCATGACTTCCCCAAGTCCATGCAATCGATTCCTTGCATGAGCCACAGTTCAGGGATGCCCTTGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS CCA 90 bp GTGAGCGCAGAGGTGTACTTGGGTCTCTTCCAGTCCACCCGTGTGTaGTCTCGAGCATCACTATTCTTCCACTGCTGCATGATCTTGGCC +
Preference number: 5 (lower is better)
Translates to: VSAEVYLGLFQSTRV*SRASLFFHCCMILA
Trigger: GGCCAAGATCATGCAGCAGTGGAAGAATAGTGATGCTCGAGACCACACACGGGTGGACTGGAAGAGACCCAAGTACACCTCTGCGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTGCTCCTGCCCCGCTGTaGCGGGGGAGGGTCGATGTC +
Preference number: 5 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSAPAPL*RGRVDV
Trigger: GACATCGACCCTCCCCCGCAACAGCGGGGCAGGAGC...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGCTCCTGCCCCGCTGTaGCGGGGGAGGGTCGATGTC +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAAPAPL*RGRVDV
Trigger: GACATCGACCCTCCCCCGCAACAGCGGGGCAGGAGC...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS TCA 90 bp CTCCATCTGCTCCAGTTACAATCCCGTGGCTCCCAAGGGCATCCCTaGACTGTGGCTCATGCAAGGAATCGATTGCATGGACTTGGGGAA +
Preference number: 5 (lower is better)
Translates to: LHLLQLQSRGSQGHP*TVAHARNRLHGLGE
Trigger: TTCCCCAAGTCCATGCAATCGATTCCTTGCATGAGCCACAGTTCAGGGATGCCCTTGGGAGCCACGGGATTGTAACTGGAGCAGATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGCTGGATGTCGATCCCTaGGCCCCAGGGAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKLDVDP*APGNSW
Trigger: CCAGCTGTTCCCTGGGGCCAAGGGATCGACATCCAG...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTGGACTGGTCACTGGTaGTCTGGTCCCGTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPWTGHW*SGPVLP
Trigger: AGGAAGGACGGGACCAGACAACCAGTGACCAGTCCA...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCAGCCACCAGACTGCCGTaGAGCCTGAGCACACCAGGA +
Preference number: 5 (lower is better)
Translates to: HTMGSSILCELLMRLPLPATRLP*SLSTPG
Trigger: TCCTGGTGTGCTCAGGCTCAACGGCAGTCTGGTGGC...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS TCA 90 bp TCACAGTCCACCACCACCAGCCGCTCCTTTTTCTTCTCCAGGTCCTaGAAGAGCATCCGGTATCCCTCCTCTGTGGTTGTCAAAATGTTG +
Preference number: 5 (lower is better)
Translates to: SQSTTTSRSFFFSRS*KSIRYPSSVVVKML
Trigger: CAACATTTTGACAACCACAGAGGAGGGATACCGGATGCTCTTTCAGGACCTGGAGAAGAAAAAGGAGCGGCTGGTGGTGGTGGACTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000518862.5
ENST00000520966.1
ENST00000521843.6
CDS TCA 90 bp AAGTTACTCCATGGCCACTCCAAGCCGCCAGCTAGCTGGAGAGGCTaGAAGAGATGGGTACTGCAGCACATGTATGCCCGACAAAATATC +
Preference number: 5 (lower is better)
Translates to: KLLHGHSKPPASWRG*KRWVLQHMYARQNI
Trigger: GATATTTTGTCGGGCATACATGTGCTGCAGTACCCATCTCTTTCAGCCTCTCCAGCTAGCTGGCGGCTTGGAGTGGCCATGGAGTAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448073.8
ENST00000518783.1
CDS GCA 90 bp CGGTATCCCTCCTCTGTGGTTGTCAAAATGTTGACTGCTGTCACCTaGCAGTTCTTCTCAGCAGCTGTATCCAGGACTTTCTGCAGGACG +
Preference number: 5 (lower is better)
Translates to: RYPSSVVVKMLTAVT*QFFSAAVSRTFCRT
Trigger: CGTCCTGCAGAAAGTCCTGGATACAGCTGCTGAGAAGAACTGGCAGGTGACAGCAGTCAACATTTTGACAACCACAGAGGAGGGATACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000518862.5
ENST00000520966.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCAGCGCAGAGGTGTACTaGGGTCTCTTCCAGTCCACC +
Preference number: 5 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPSAEVY*GLFQST
Trigger: GGTGGACTGGAAGAGACCCAAGTACACCTCTGCGCT...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTCTGGATGTCGATCCCTaGGCCCCAGGGAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSLDVDP*APGNSW
Trigger: CCAGCTGTTCCCTGGGGCCAAGGGATCGACATCCAG...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCAATTATCGCCCCCAGCTaGGGCATCGGTGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSIIAPS*GIGGCR
Trigger: CCTGCAGCCACCGATGCCCAAGCTGGGGGCGATAAT...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTATTATCGCCCCCAGCTaGGGCATCGGTGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSIIAPS*GIGGCR
Trigger: CCTGCAGCCACCGATGCCCAAGCTGGGGGCGATAAT...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp AGCCCCAATCATACGTATATTGGAATACAACGTCCTCATGCTATCTTAGCTGGGATTATCGCCCCCAGCTaGGGCATCGGTGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SPNHTYIGIQRPHAILAGIIAPS*GIGGCR
Trigger: CCTGCAGCCACCGATGCCCAAGCTGGGGGCGATAAT...CCCAGCTAAGATAGCATGAGGACGTTGTATTCCAATATACGTATGATTGGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCTCAGAGCGCTTGTCTaGTCCTTGGAATCACCTCCC +
Preference number: 5 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPLRALV*SLESPP
Trigger: GGGAGGTGATTCCAAGGACAAGACAAGCGCTCTGAG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285900.10
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGGTCCGTATGGCTTCGTaGATGGATTGCTGTGGGATC +
Preference number: 5 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQVRMAS*MDCCGI
Trigger: GATCCCACAGCAATCCATCAACGAAGCCATACGGAC...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCATCTCCATCAGAGGTTaGGGCCAAGGAGTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPISIRG*GQGVEG
Trigger: ACCCTCCACTCCTTGGCCCAAACCTCTGATGGAGAT...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS TCA 90 bp CCTGAAAGAGCATCCGGTATCCCTCCTCTGTGGTTGTCAAAATGTTaGCTGCTGTCACCTGCCAGTTCTTCTCAGCAGCTGTATCCAGGA +
Preference number: 5 (lower is better)
Translates to: PERASGIPPLWLSKC*LLSPASSSQQLYPG
Trigger: TCCTGGATACAGCTGCTGAGAAGAACTGGCAGGTGACAGCAGTCAACATTTTGACAACCACAGAGGAGGGATACCGGATGCTCTTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000518862.5
ENST00000520966.1
ENST00000521843.6
CDS TCA 90 bp ACCTTTCAGCCGGACAAGATCTATAGGTCATCTCAAAGCTGTCGCTaGTGTTCACAATATCAATCTGGGGGAGCAGCTTCGGGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: TFQPDKIYRSSQSCR*CSQYQSGGAASGAL
Trigger: CAGAGCCCCCGAAGCTGCTCCCCCAGATTGATATTGTGAACATCAGCGACAGCTTTGAGATGACCTATAGATCTTGTCCGGCTGAAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000517469.1
CDS TCA 90 bp TCTGCAGGACGGATAAGCATCTATAGGTCATCTCAAAGCTGTCGCTaGTGTTCACAATATCAATCTGGGGGAGCAGCTTCGGGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: SAGRISIYRSSQSCR*CSQYQSGGAASGAL
Trigger: CAGAGCCCCCGAAGCTGCTCCCCCAGATTGATATTGTGAACATCAGCGACAGCTTTGAGATGACCTATAGATGCTTATCCGTCCTGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518142.5
CDS GCA 90 bp CTGTTGCGGGGGAGGGTCGATGTCCGTATGGCTTCGTTGATGGATTaGTGTGGGATCAAACAAAAACCCTTCATCCGCTTGGATTCACTA +
Preference number: 5 (lower is better)
Translates to: LLRGRVDVRMASLMD*CGIKQKPFIRLDSL
Trigger: TAGTGAATCCAAGCGGATGAAGGGTTTTTGTTTGATCCCACAGCAATCCATCAACGAAGCCATACGGACATCGACCCTCCCCCGCAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS CCA 90 bp GCTGGTTTGGAAATAATCCCCCGATCTGGATATTGTTGGGGAAATTaGCACCTACTACCGCGCCTAGGAAACCGGTGCAGAAGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: AGLEIIPRSGYCWGN*HLLPRLGNRCRRRQ
Trigger: TTGCCTTCTTCTGCACCGGTTTCCTAGGCGCGGTAGTAGGTGCCAATTTCCCCAACAATATCCAGATCGGGGGATTATTTCCAAACCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000474198.1
ENST00000518142.5
CDS-3UTR CAA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACGCGCTTGTCTTGTCCTaGGAATCACCTCCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHALVLS*ESPPPL
Trigger: CAGCGGGGGAGGTGATTCCAAGGACAAGACAAGCGC...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGGCGCTTGTCTTGTCCTaGGAATCACCTCCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: SILQENLLNHPSCGRSGWALVLS*ESPPPL
Trigger: CAGCGGGGGAGGTGATTCCAAGGACAAGACAAGCGC...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000285900.10
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTCAGAGCGCTTGTCTaGTCCTTACTTCCGGAGTCC +
Preference number: 5 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPLRALV*SLLPES
Trigger: GGACTCCGGAAGTAAGGACAAGACAAGCGCTCTGAG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340592.9
CDS TCA 90 bp TGGAGAACTGGGAACAGAATCTATAGGTCATCTCAAAGCTGTCGCTaGTGTTCACAATATCAATCTGGGGGAGCAGCTTCGGGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: WRTGNRIYRSSQSCR*CSQYQSGGAASGAL
Trigger: CAGAGCCCCCGAAGCTGCTCCCCCAGATTGATATTGTGAACATCAGCGACAGCTTTGAGATGACCTATAGATTCTGTTCCCAGTTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518783.1
ENST00000518862.5
ENST00000521843.6
CDS TCA 90 bp GAGAATCACTGCACTAGGATCTATAGGTCATCTCAAAGCTGTCGCTaGTGTTCACAATATCAATCTGGGGGAGCAGCTTCGGGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: ENHCTRIYRSSQSCR*CSQYQSGGAASGAL
Trigger: CAGAGCCCCCGAAGCTGCTCCCCCAGATTGATATTGTGAACATCAGCGACAGCTTTGAGATGACCTATAGATCCTAGTGCAGTGATTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000492291.1
CDS-3UTR CAA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAACCTGCAGTTCCTTCCTaGCTTGCTTGCTTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKPAVPS*LACFLP
Trigger: AGGAAGGAAGCAAGCAAGCAAGGAAGGAACTGCAGG...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285900.10
CDS-3UTR CAA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCCCCGATCTGGATATaGTTGGGGAAATTGGCACCT +
Preference number: 5 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPPPIWI*LGKLAP
Trigger: AGGTGCCAATTTCCCCAACAATATCCAGATCGGGGG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
50% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000340592.9
CDS-3UTR CAA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGTGGTTGTCAAAATGTaGACTGCTGTCACCTGCCAG +
Preference number: 5 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPVVVKM*TAVTCQ
Trigger: CTGGCAGGTGACAGCAGTCAACATTTTGACAACCAC...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTGGAAACCTGTCACATaGGCGCCACTCTCCTTGAAT +
Preference number: 5 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPWKPVT*APLSLN
Trigger: ATTCAAGGAGAGTGGCGCCAATGTGACAGGTTTCCA...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAAGCGCAGAGGTGTACTaGGGTCTCTTCCAGTCCACC +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIASAEVY*GLFQST
Trigger: GGTGGACTGGAAGAGACCCAAGTACACCTCTGCGCT...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATGGACTGGTCACTGGTaGTCTGGTCCCGTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAWTGHW*SGPVLP
Trigger: AGGAAGGACGGGACCAGACAACCAGTGACCAGTCCA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp GTAAGGAGAAGGAAAGGGCCTAACAGAACCTGCAAACCATGGATATTAGTAAGAGCGCTTGTCTTGTCCTaGGAATCACCTCCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: VRRRKGPNRTCKPWILVRALVLS*ESPPPL
Trigger: CAGCGGGGGAGGTGATTCCAAGGACAAGACAAGCGC...TCTTACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCCTTTCCTTCTCCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCGTCCGTATGGCTTCGTaGATGGATTGCTGTGGGATC +
Preference number: 5 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPVRMAS*MDCCGI
Trigger: GATCCCACAGCAATCCATCAACGAAGCCATACGGAC...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCATGCAAGGAATCGATaGCATGGACTTGGGGAAGTC +
Preference number: 5 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPHARNR*HGLGEV
Trigger: GACTTCCCCAAGTCCATGCAATCGATTCCTTGCATG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCACCCTCATCCTGAGTaGCTTTTCACCTGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPHPHPE*LFTCVL
Trigger: GAGAACACAGGTGAAAAGCAACTCAGGATGAGGGTG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp GTTGATGTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGCCACCAGACTGCCGTaGAGCCTGAGCACACCAGGA +
Preference number: 5 (lower is better)
Translates to: VDVKGLFPTLPRCRLPNGATRLP*SLSTPG
Trigger: TCCTGGTGTGCTCAGGCTCAACGGCAGTCTGGTGGC...ACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAACATCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS GCA 90 bp AAAGAGCATCCGGTATCCCTCCTCTGTGGTTGTCAAAATGTTGACTaGTGTCACCTGCCAGTTCTTCTCAGCAGCTGTATCCAGGACTTT +
Preference number: 5 (lower is better)
Translates to: KEHPVSLLCGCQNVD*CHLPVLLSSCIQDF
Trigger: AAAGTCCTGGATACAGCTGCTGAGAAGAACTGGCAGGTGACAGCAGTCAACATTTTGACAACCACAGAGGAGGGATACCGGATGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000518862.5
ENST00000520966.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGGGGGCTCTGTGAGTaGCGACAAAGCAAATCTAAA +
Preference number: 5 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPRGLCE*RQSKSK
Trigger: TTTAGATTTGCTTTGTCGCAACTCACAGAGCCCCCG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAAGTGGTTGTCAAAATGTaGACTGCTGTCACCTGCCAG +
Preference number: 5 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKVVVKM*TAVTCQ
Trigger: CTGGCAGGTGACAGCAGTCAACATTTTGACAACCAC...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCGTGGTTGTCAAAATGTaGACTGCTGTCACCTGCCAG +
Preference number: 5 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPVVVKM*TAVTCQ
Trigger: CTGGCAGGTGACAGCAGTCAACATTTTGACAACCAC...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp GAGAGTTGGGATCTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAATGGACTGGTCACTGGTaGTCTGGTCCCGTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: ESWDLQESYMSGILTSNKWTGHW*SGPVLP
Trigger: AGGAAGGACGGGACCAGACAACCAGTGACCAGTCCA...TTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAGATCCCAACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTCTCAGAGCGCTTGTCTaGTCCTTGGAATCACCTCCC +
Preference number: 5 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSLRALV*SLESPP
Trigger: GGGAGGTGATTCCAAGGACAAGACAAGCGCTCTGAG...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285900.10
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp AGCCCCAATCATACGTATATTGGAATACAACGTCCTCATGCTATCTTAGCTGGGCTCAGAGCGCTTGTCTaGTCCTTGGAATCACCTCCC +
Preference number: 5 (lower is better)
Translates to: SPNHTYIGIQRPHAILAGLRALV*SLESPP
Trigger: GGGAGGTGATTCCAAGGACAAGACAAGCGCTCTGAG...CCCAGCTAAGATAGCATGAGGACGTTGTATTCCAATATACGTATGATTGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGATCGATTGCATGGACTaGGGGAAGTCATGGCTGACC +
Preference number: 5 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKIDCMD*GKSWLT
Trigger: GGTCAGCCATGACTTCCCCAAGTCCATGCAATCGAT...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCATGCAAGGAATCGATaGCATGGACTTGGGGAAGTC +
Preference number: 5 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPHARNR*HGLGEV
Trigger: GACTTCCCCAAGTCCATGCAATCGATTCCTTGCATG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAATCTCCATCAGAGGTTaGGGCCAAGGAGTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAISIRG*GQGVEG
Trigger: ACCCTCCACTCCTTGGCCCAAACCTCTGATGGAGAT...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGTTCTCAGGGCCAAGGTaGACTCTGAAGAAATATACC +
Preference number: 5 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQFSGPR*TLKKYT
Trigger: GGTATATTTCTTCAGAGTCAACCTTGGCCCTGAGAA...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGCCCCCGATCTGGATATaGTTGGGGAAATTGGCACCT +
Preference number: 5 (lower is better)
Translates to: SILQENLLNHPSCGRSGWPPIWI*LGKLAP
Trigger: AGGTGCCAATTTCCCCAACAATATCCAGATCGGGGG...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000340592.9
CDS-3UTR CAA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCACGGGGGCTCTGTGAGTaGCGACAAAGCAAATCTAAA +
Preference number: 5 (lower is better)
Translates to: HTMGSSILCELLMRLPLPRGLCE*RQSKSK
Trigger: TTTAGATTTGCTTTGTCGCAACTCACAGAGCCCCCG...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTCTGTTCTGAACACTaGAATTATCGCCCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPFCSEH*NYRPQL
Trigger: AAGCTGGGGGCGATAATTCAAGTGTTCAGAACAGAA...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCAATATCCCAAACTCATaGGACTGGTCACTGGTTGTC +
Preference number: 5 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPNIPNS*DWSLVV
Trigger: GACAACCAGTGACCAGTCCAATGAGTTTGGGATATT...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCAAACCCTTCATCCGCTaGGATTCACTACGGGATTTG +
Preference number: 5 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPKPFIR*DSLRDL
Trigger: CAAATCCCGTAGTGAATCCAAGCGGATGAAGGGTTT...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTGTCCGTATGGCTTCGTaGATGGATTGCTGTGGGATC +
Preference number: 5 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSVRMAS*MDCCGI
Trigger: GATCCCACAGCAATCCATCAACGAAGCCATACGGAC...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTATCGATTGCATGGACTaGGGGAAGTCATGGCTGACC +
Preference number: 5 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSIDCMD*GKSWLT
Trigger: GGTCAGCCATGACTTCCCCAAGTCCATGCAATCGAT...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGTTGTGGTCGCAGTGGTaGGTGGTGGTTGCGTTTCAT +
Preference number: 5 (lower is better)
Translates to: SILQENLLNHPSCGRSGWLWSQW*VVVAFH
Trigger: ATGAAACGCAACCACCACCAACCACTGCGACCACAA...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCTGTGACTGCTGGTTaGGAAATAATCCCCACACTT +
Preference number: 5 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPPVTAG*EIIPTL
Trigger: AAGTGTGGGGATTATTTCCAAACCAGCAGTCACAGG...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518783.1
CDS CCA 90 bp TTCTGTTCTGAACACTTGAATTATCGCCCCCAGCTTGGGCATCGGTaGCTGCAGGGACAAACTTATCATCTTCATTCCAGTAACCAATCT +
Preference number: 5 (lower is better)
Translates to: FCSEHLNYRPQLGHR*LQGQTYHLHSSNQS
Trigger: AGATTGGTTACTGGAATGAAGATGATAAGTTTGTCCCTGCAGCCACCGATGCCCAAGCTGGGGGCGATAATTCAAGTGTTCAGAACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAATATTGTTGGGGAAATaGGCACCTACTACCGCGCCT +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAILLGK*APTTAP
Trigger: AGGCGCGGTAGTAGGTGCCAATTTCCCCAACAATAT...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000340592.9
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCACCTGTGACTGCTGGTTaGGAAATAATCCCCCGATCT +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAPVTAG*EIIPRS
Trigger: AGATCGGGGGATTATTTCCAAACCAGCAGTCACAGG...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000340592.9
CDS-3UTR CAA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGCGGGGGCTCTGTGAGTaGCGACAAAGCAAATCTAAA +
Preference number: 5 (lower is better)
Translates to: SILQENLLNHPSCGRSGWRGLCE*RQSKSK
Trigger: TTTAGATTTGCTTTGTCGCAACTCACAGAGCCCCCG...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTGGTTGTCAAAATGTaGACTGCTGTCACCTGCCAG +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAVVVKM*TAVTCQ
Trigger: CTGGCAGGTGACAGCAGTCAACATTTTGACAACCAC...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATGGCCCAAGATAGCATaGAGGCGTTCTGATTCACAG +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAWPKIA*RRSDSQ
Trigger: CTGTGAATCAGAACGCCTCAATGCTATCTTGGGCCA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGTGGCCCAAGATAGCATaGAGGCGTTCTGATTCACAG +
Preference number: 5 (lower is better)
Translates to: SILQENLLNHPSCGRSGWWPKIA*RRSDSQ
Trigger: CTGTGAATCAGAACGCCTCAATGCTATCTTGGGCCA...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp ACTTCTCCAACAATGTCTATCTCCATCAGAGGTTTGGGCCAAGGAGTGGAGGGTTTGGCGCCACTCTCCTaGAATTTGTTTAAGTCAATG +
Preference number: 5 (lower is better)
Translates to: TSPTMSISIRGLGQGVEGLAPLS*NLFKSM
Trigger: CATTGACTTAAACAAATTCAAGGAGAGTGGCGCCAA...ACCCTCCACTCCTTGGCCCAAACCTCTGATGGAGATAGACATTGTTGGAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTGGCGCCACTCTCCTaGAATTTGTTTAAGTCAATG +
Preference number: 5 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPLAPLS*NLFKSM
Trigger: CATTGACTTAAACAAATTCAAGGAGAGTGGCGCCAA...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACTGGAAACCTGTCACATaGGCGCCACTCTCCTTGAAT +
Preference number: 5 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHWKPVT*APLSLN
Trigger: ATTCAAGGAGAGTGGCGCCAATGTGACAGGTTTCCA...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTGGAAACCTGTCACATaGGCGCCACTCTCCTTGAAT +
Preference number: 5 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSWKPVT*APLSLN
Trigger: ATTCAAGGAGAGTGGCGCCAATGTGACAGGTTTCCA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATAGCGCAGAGGTGTACTaGGGTCTCTTCCAGTCCACC +
Preference number: 5 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHSAEVY*GLFQST
Trigger: GGTGGACTGGAAGAGACCCAAGTACACCTCTGCGCT...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCGGCTTCGTTGATGGATaGCTGTGGGATCAAACAAAA +
Preference number: 5 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPGFVDG*LWDQTK
Trigger: TTTTGTTTGATCCCACAGCAATCCATCAACGAAGCC...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp GTAAGGAGAAGGAAAGGGCCTAACAGAACCTGCAAACCATGGATATTAGTAAGAATCGATTGCATGGACTaGGGGAAGTCATGGCTGACC +
Preference number: 5 (lower is better)
Translates to: VRRRKGPNRTCKPWILVRIDCMD*GKSWLT
Trigger: GGTCAGCCATGACTTCCCCAAGTCCATGCAATCGAT...TCTTACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCCTTTCCTTCTCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTCATGCAAGGAATCGATaGCATGGACTTGGGGAAGTC +
Preference number: 5 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSHARNR*HGLGEV
Trigger: GACTTCCCCAAGTCCATGCAATCGATTCCTTGCATG...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp GAGAGTTGGGATCTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAATTGTGGTCGCAGTGGTaGGTGGTGGTTGCGTTTCAT +
Preference number: 5 (lower is better)
Translates to: ESWDLQESYMSGILTSNKLWSQW*VVVAFH
Trigger: ATGAAACGCAACCACCACCAACCACTGCGACCACAA...TTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAGATCCCAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCTTCAGGAAAACCTGTaGAATCATCCTTCTTGTGGT +
Preference number: 5 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPLQENL*NHPSCG
Trigger: ACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATTAGCTTGCTTAGCATaGCTCCCCATGTCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIALACLA*LPMSEA
Trigger: AGCCTCTGACATGGGGAGCAATGCTAAGCAAGCTAA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS TCA 90 bp ATAGAAGCAATTACTTACATCTATAGGTCATCTCAAAGCTGTCGCTaGTGTTCACAATATCAATCTGGGGGAGCAGCTTCGGGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: IEAITYIYRSSQSCR*CSQYQSGGAASGAL
Trigger: CAGAGCCCCCGAAGCTGCTCCCCCAGATTGATATTGTGAACATCAGCGACAGCTTTGAGATGACCTATAGATGTAAGTAATTGCTTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474198.1
CDS TCA 90 bp GAAATTTTTCTTGGAGGGCTTTCTCTTACAAAGACGAATGGCAACTaGAGTCATTTTTGCAACACCACCACCTACCCACAGGCCCTCCTT +
Preference number: 5 (lower is better)
Translates to: EIFLGGLSLTKTNGN*SHFCNTTTYPQALL
Trigger: AAGGAGGGCCTGTGGGTAGGTGGTGGTGTTGCAAAAATGACTTCAGTTGCCATTCGTCTTTGTAAGAGAAAGCCCTCCAAGAAAAATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474198.1
CDS CCA 90 bp GCCTCTAGAAATTTTTCTTGGAGGGCTTTCTCTTACAAAGACGAATaGCAACTGAAGTCATTTTTGCAACACCACCACCTACCCACAGGC +
Preference number: 5 (lower is better)
Translates to: ASRNFSWRAFSYKDE*QLKSFLQHHHLPTG
Trigger: GCCTGTGGGTAGGTGGTGGTGTTGCAAAAATGACTTCAGTTGCCATTCGTCTTTGTAAGAGAAAGCCCTCCAAGAAAAATTTCTAGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474198.1
CDS-3UTR CAA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTCCGATCTGGATATTGTaGGGGAAATTGGCACCTACT +
Preference number: 5 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSPIWIL*GKLAPT
Trigger: AGTAGGTGCCAATTTCCCCAACAATATCCAGATCGG...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000340592.9
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCACCGATCTGGATATTGTaGGGGAAATTGGCACCTACT +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAPIWIL*GKLAPT
Trigger: AGTAGGTGCCAATTTCCCCAACAATATCCAGATCGG...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000340592.9
CDS-3UTR CAA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCCACTCTCCTTGAATTaGTTTAAGTCAATGTCCATG +
Preference number: 5 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPPLSLN*FKSMSM
Trigger: CATGGACATTGACTTAAACAAATTCAAGGAGAGTGG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp GTAAGGAGAAGGAAAGGGCCTAACAGAACCTGCAAACCATGGATATTAGTAAGATGGAAACCTGTCACATaGGCGCCACTCTCCTTGAAT +
Preference number: 5 (lower is better)
Translates to: VRRRKGPNRTCKPWILVRWKPVT*APLSLN
Trigger: ATTCAAGGAGAGTGGCGCCAATGTGACAGGTTTCCA...TCTTACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCCTTTCCTTCTCCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGAGAACCACAAACTGTaGAATATCCCAAACTCATTG +
Preference number: 5 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPENHKL*NIPNSL
Trigger: CAATGAGTTTGGGATATTCAACAGTTTGTGGTTCTC...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAAAACCCTTCATCCGCTaGGATTCACTACGGGATTTG +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAKPFIR*DSLRDL
Trigger: CAAATCCCGTAGTGAATCCAAGCGGATGAAGGGTTT...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTAAACCCTTCATCCGCTaGGATTCACTACGGGATTTG +
Preference number: 5 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSKPFIR*DSLRDL
Trigger: CAAATCCCGTAGTGAATCCAAGCGGATGAAGGGTTT...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCCGTTTCATTTTGTTGTaGTTTTTGGCACTGAAGGGT +
Preference number: 5 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPRFILL*FLALKG
Trigger: ACCCTTCAGTGCCAAAAACAACAACAAAATGAAACG...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp CCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATCGGATTCTGCAGGTTACTCTCCCCTTATaGCAGTACAGTGTTATTTTT +
Preference number: 5 (lower is better)
Translates to: PTLPRCRLPNGGSHRILQVTLPL*QYSVIF
Trigger: AAAAATAACACTGTACTGCAATAAGGGGAGAGTAAC...CTGCAGAATCCGATGTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp AATACAACGTCCTCATGCTATCTTAGCTGGGGGAAGGTCAGCCTCTTTGAGTTAAAGCAATCATCCATCTaGAGGGTCCGGTTTCATGAA +
Preference number: 5 (lower is better)
Translates to: NTTSSCYLSWGKVSLFELKQSSI*RVRFHE
Trigger: TTCATGAAACCGGACCCTCAAGATGGATGATTGCTT...TAACTCAAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGGTTTGTCTGTTTCCCTaGGAATCCGAACACTTAAAC +
Preference number: 5 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKVCLFP*ESEHLN
Trigger: GTTTAAGTGTTCGGATTCCAAGGGAAACAGACAAAC...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285900.10
CDS-3UTR CAA 90 bp CACACCATGGGAAGCTCTATTTTGTGTGAGCTTTTGATGAGGCTTCCTCTTCCAGCTGCATATTCCTTTTaGCATTGGCGAAAAAGAAGC +
Preference number: 5 (lower is better)
Translates to: HTMGSSILCELLMRLPLPAAYSF*HWRKRS
Trigger: GCTTCTTTTTCGCCAATGCAAAAAGGAATATGCAGC...TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAATAGAGCTTCCCATGGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000285900.10
CDS-3UTR CAA 90 bp AATACAACGTCCTCATGCTATCTTAGCTGGGGGAAGGTCAGCCTCTTTGAGTTATTGGCGCCACTCTCCTaGAATTTGTTTAAGTCAATG +
Preference number: 5 (lower is better)
Translates to: NTTSSCYLSWGKVSLFELLAPLS*NLFKSM
Trigger: CATTGACTTAAACAAATTCAAGGAGAGTGGCGCCAA...TAACTCAAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCATTCTGTTCTGAACACTaGAATTATCGCCCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAFCSEH*NYRPQL
Trigger: AAGCTGGGGGCGATAATTCAAGTGTTCAGAACAGAA...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp AGCCCCAATCATACGTATATTGGAATACAACGTCCTCATGCTATCTTAGCTGGGAATATCCCAAACTCATaGGACTGGTCACTGGTTGTC +
Preference number: 5 (lower is better)
Translates to: SPNHTYIGIQRPHAILAGNIPNS*DWSLVV
Trigger: GACAACCAGTGACCAGTCCAATGAGTTTGGGATATT...CCCAGCTAAGATAGCATGAGGACGTTGTATTCCAATATACGTATGATTGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTAATATCCCAAACTCATaGGACTGGTCACTGGTTGTC +
Preference number: 5 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSNIPNS*DWSLVV
Trigger: GACAACCAGTGACCAGTCCAATGAGTTTGGGATATT...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp GTAAGGAGAAGGAAAGGGCCTAACAGAACCTGCAAACCATGGATATTAGTAAGAAAACCCTTCATCCGCTaGGATTCACTACGGGATTTG +
Preference number: 5 (lower is better)
Translates to: VRRRKGPNRTCKPWILVRKPFIR*DSLRDL
Trigger: CAAATCCCGTAGTGAATCCAAGCGGATGAAGGGTTT...TCTTACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCCTTTCCTTCTCCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGGGCTTCGTTGATGGATaGCTGTGGGATCAAACAAAA +
Preference number: 5 (lower is better)
Translates to: SILQENLLNHPSCGRSGWGFVDG*LWDQTK
Trigger: TTTTGTTTGATCCCACAGCAATCCATCAACGAAGCC...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACGGCTTCGTTGATGGATaGCTGTGGGATCAAACAAAA +
Preference number: 5 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHGFVDG*LWDQTK
Trigger: TTTTGTTTGATCCCACAGCAATCCATCAACGAAGCC...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGGCTTCGTTGATGGATaGCTGTGGGATCAAACAAAA +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAGFVDG*LWDQTK
Trigger: TTTTGTTTGATCCCACAGCAATCCATCAACGAAGCC...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATGTCCGTATGGCTTCGTaGATGGATTGCTGTGGGATC +
Preference number: 5 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHVRMAS*MDCCGI
Trigger: GATCCCACAGCAATCCATCAACGAAGCCATACGGAC...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp GTTACTTGTGGGCTCAGTAGCTGGAGAGGCATCTTACTAGGCCAAAGGCAAAAACGTTTCATTTTGTTGTaGTTTTTGGCACTGAAGGGT +
Preference number: 5 (lower is better)
Translates to: VTCGLSSWRGILLGQRQKRFILL*FLALKG
Trigger: ACCCTTCAGTGCCAAAAACAACAACAAAATGAAACG...TTTTTGCCTTTGGCCTAGTAAGATGCCTCTCCAGCTACTGAGCCCACAAGTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp ATAGAAGAAGAGAGTCTACTCCACAATGGGTTCCTGCTTAGATGCCAGGCAAAGCTTCAGGAAAACCTGTaGAATCATCCTTCTTGTGGT +
Preference number: 5 (lower is better)
Translates to: IEEESLLHNGFLLRCQAKLQENL*NHPSCG
Trigger: ACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAG...CTTTGCCTGGCATCTAAGCAGGAACCCATTGTGGAGTAGACTCTCTTCTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp CCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCGTTACTCTCCCCTTATaGCAGTACAGTGTTATTTTT +
Preference number: 5 (lower is better)
Translates to: PVTLLSETQVSLDRVTLPVTLPL*QYSVIF
Trigger: AAAAATAACACTGTACTGCAATAAGGGGAGAGTAAC...GGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACTTCTCAGGGCCAAGGTaGACTCTGAAGAAATATACC +
Preference number: 5 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHFSGPR*TLKKYT
Trigger: GGTATATTTCTTCAGAGTCAACCTTGGCCCTGAGAA...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS GCA 90 bp GTGAGTTGCGACAAAGCAAATCTAAAAGCAGCATGTTCCTGTGACTaGTGGTTTGGAAATAATCCCCACACTTCAGGATGTAGCTTAACA +
Preference number: 5 (lower is better)
Translates to: VSCDKANLKAACSCD*WFGNNPHTSGCSLT
Trigger: TGTTAAGCTACATCCTGAAGTGTGGGGATTATTTCCAAACCAGCAGTCACAGGAACATGCTGCTTTTAGATTTGCTTTGTCGCAACTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448073.8
ENST00000518783.1
CDS-3UTR CAA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACATATTCCTTTTTGCATaGGCGAAAAAGAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHIFLFA*AKKKPR
Trigger: CCTGGGCTTCTTTTTCGCCAATGCAAAAAGGAATAT...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000285900.10
CDS-3UTR CAA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTATATTCCTTTTTGCATaGGCGAAAAAGAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSIFLFA*AKKKPR
Trigger: CCTGGGCTTCTTTTTCGCCAATGCAAAAAGGAATAT...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000340592.9
CDS-3UTR CAA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATCGGGGGCTCTGTGAGTaGCGACAAAGCAAATCTAAA +
Preference number: 5 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHRGLCE*RQSKSK
Trigger: TTTAGATTTGCTTTGTCGCAACTCACAGAGCCCCCG...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATTGGCCCAAGATAGCATaGAGGCGTTCTGATTCACAG +
Preference number: 5 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHWPKIA*RRSDSQ
Trigger: CTGTGAATCAGAACGCCTCAATGCTATCTTGGGCCA...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAGTACAGTTTGGCGCCACTCTCCTaGAATTTGTTTAAGTCAATG +
Preference number: 5 (lower is better)
Translates to: SETQVSLDRVTLPLLQYSLAPLS*NLFKSM
Trigger: CATTGACTTAAACAAATTCAAGGAGAGTGGCGCCAA...ACTGTACTGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCACTTCAGGAAAACCTGTaGAATCATCCTTCTTGTGGT +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIALQENL*NHPSCG
Trigger: ACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAG...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGCTTCAGGAAAACCTGTaGAATCATCCTTCTTGTGGT +
Preference number: 5 (lower is better)
Translates to: SILQENLLNHPSCGRSGWLQENL*NHPSCG
Trigger: ACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAG...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCCAGTGACTCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCGTTACTCTCCCCTTATaGCAGTACAGTGTTATTTTT +
Preference number: 5 (lower is better)
Translates to: SSDSTLRDTGFIRQGYSPVTLPL*QYSVIF
Trigger: AAAAATAACACTGTACTGCAATAAGGGGAGAGTAAC...GGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGAGTCACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATTTAGCTTGCTTAGCATaGCTCCCCATGTCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHLACLA*LPMSEA
Trigger: AGCCTCTGACATGGGGAGCAATGCTAAGCAAGCTAA...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCATCTTTTACACTTAGCTaGCTTAGCATTGCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSSFTLS*LSIAPH
Trigger: ATGGGGAGCAATGCTAAGCAAGCTAAGTGTAAAAGA...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAATTTTGTGTGAGCTTTaGATGAGGCTTCCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAILCEL*MRLPLP
Trigger: TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAAT...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGATGGGAAGCTCTATTTaGTGTGAGCTTTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: SILQENLLNHPSCGRSGWMGSSI*CELLMR
Trigger: CCTCATCAAAAGCTCACACAAAATAGAGCTTCCCAT...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp AATACAACGTCCTCATGCTATCTTAGCTGGGGGAAGGTCAGCCTCTTTGAGTTACCAATCATACGTATATaGGAATACAACGTCCTCATG +
Preference number: 5 (lower is better)
Translates to: NTTSSCYLSWGKVSLFELPIIRI*EYNVLM
Trigger: CATGAGGACGTTGTATTCCAATATACGTATGATTGG...TAACTCAAAGAGGCTGACCTTCCCCCAGCTAAGATAGCATGAGGACGTTGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCACCTTTAGCATGTCAATaGCTAATGATAACCCCTAGC +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAPLACQ*LMITPS
Trigger: GCTAGGGGTTATCATTAGCAATTGACATGCTAAAGG...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp GAGAGTTGGGATCTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAAAAGCAATCATCCATCTaGAGGGTCCGGTTTCATGAA +
Preference number: 5 (lower is better)
Translates to: ESWDLQESYMSGILTSNKKQSSI*RVRFHE
Trigger: TTCATGAAACCGGACCCTCAAGATGGATGATTGCTT...TTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAGATCCCAACTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCACCTGTGACTGCTGGTTaGGAAATAATCCCCATTAAA +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAPVTAG*EIIPIK
Trigger: TTTAATGGGGATTATTTCCAAACCAGCAGTCACAGG...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521843.6
CDS GCA 90 bp GCTGGTTTGGAAATAATCCCCACAGAGCAATTACATGAGTCATTTTaGAGGGATTCTAGTGAGAGGATTCAAGCTTCTTTCAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: AGLEIIPTEQLHESF*RDSSERIQASFRSF
Trigger: GAAAGACCTGAAAGAAGCTTGAATCCTCTCACTAGAATCCCTGCAAAATGACTCATGTAATTGCTCTGTGGGGATTATTTCCAAACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481559.6
CDS-3UTR CAA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACCACTCTCCTTGAATTaGTTTAAGTCAATGTCCATG +
Preference number: 5 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSPLSLN*FKSMSM
Trigger: CATGGACATTGACTTAAACAAATTCAAGGAGAGTGG...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGCCACTCTCCTTGAATTaGTTTAAGTCAATGTCCATG +
Preference number: 5 (lower is better)
Translates to: SILQENLLNHPSCGRSGWPLSLN*FKSMSM
Trigger: CATGGACATTGACTTAAACAAATTCAAGGAGAGTGG...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp AGCCCCAATCATACGTATATTGGAATACAACGTCCTCATGCTATCTTAGCTGGGCCACTCTCCTTGAATTaGTTTAAGTCAATGTCCATG +
Preference number: 5 (lower is better)
Translates to: SPNHTYIGIQRPHAILAGPLSLN*FKSMSM
Trigger: CATGGACATTGACTTAAACAAATTCAAGGAGAGTGG...CCCAGCTAAGATAGCATGAGGACGTTGTATTCCAATATACGTATGATTGGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCACGAGAACCACAAACTGTaGAATATCCCAAACTCATTG +
Preference number: 5 (lower is better)
Translates to: LKGYFQLFQDADSLMVGHENHKL*NIPNSL
Trigger: CAATGAGTTTGGGATATTCAACAGTTTGTGGTTCTC...GTGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp TCAATTCTTCAGGAAAACCTGTTGAATCATCCTTCTTGTGGTCGCAGTGGTTGGGAGAACCACAAACTGTaGAATATCCCAAACTCATTG +
Preference number: 5 (lower is better)
Translates to: SILQENLLNHPSCGRSGWENHKL*NIPNSL
Trigger: CAATGAGTTTGGGATATTCAACAGTTTGTGGTTCTC...CCAACCACTGCGACCACAAGAAGGATGATTCAACAGGTTTTCCTGAAGAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCAATTTTGTTGTTGTTTTaGGCACTGAAGGGTTTGGGA +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIAILLLF*ALKGLG
Trigger: TCCCAAACCCTTCAGTGCCAAAAACAACAACAAAAT...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp TCTACTCTCAGAGACACAGGTTTCATTAGACAGGGTTACTCTCCCCTTATTGCACGTTTCATTTTGTTGTaGTTTTTGGCACTGAAGGGT +
Preference number: 5 (lower is better)
Translates to: STLRDTGFIRQGYSPLIARFILL*FLALKG
Trigger: ACCCTTCAGTGCCAAAAACAACAACAAAATGAAACG...TGCAATAAGGGGAGAGTAACCCTGTCTAATGAAACCTGTGTCTCTGAGAGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000518783.1
ENST00000521843.6
CDS-3UTR CAA 90 bp CTTAATCCATCTCCCTATACTCCTTCAATTATTTCCTTGGTTATCTCACTTTCTTTGTGGTCGCAGTGGTaGGTGGTGGTTGCGTTTCAT +
Preference number: 5 (lower is better)
Translates to: LNPSPYTPSIISLVISLSLWSQW*VVVAFH
Trigger: ATGAAACGCAACCACCACCAACCACTGCGACCACAA...AGAAAGTGAGATAACCAAGGAAATAATTGAAGGAGTATAGGGAGATGGATTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp GTAAGGAGAAGGAAAGGGCCTAACAGAACCTGCAAACCATGGATATTAGTAAGATCTTTTACACTTAGCTaGCTTAGCATTGCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: VRRRKGPNRTCKPWILVRSFTLS*LSIAPH
Trigger: ATGGGGAGCAATGCTAAGCAAGCTAAGTGTAAAAGA...TCTTACTAATATCCATGGTTTGCAGGTTCTGTTAGGCCCTTTCCTTCTCCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS CCA 90 bp AATGCCAACTGCTGGAATCACTCAGAAGCCTCTAGAAATTTTTCTTaGAGGGCTTTCTCTTACAAAGACGAATGGCAACTGAAGTCATTT +
Preference number: 5 (lower is better)
Translates to: NANCWNHSEASRNFS*RAFSYKDEWQLKSF
Trigger: AAATGACTTCAGTTGCCATTCGTCTTTGTAAGAGAAAGCCCTCCAAGAAAAATTTCTAGAGGCTTCTGAGTGATTCCAGCAGTTGGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474198.1
CDS-3UTR CAA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATACCTGTGACTGCTGGTTaGGAAATAATCCCCCGATCT +
Preference number: 5 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRIPVTAG*EIIPRS
Trigger: AGATCGGGGGATTATTTCCAAACCAGCAGTCACAGG...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285900.10
CDS-3UTR CAA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATATGGCCCAAGATAGCATaGAGGCGTTCTGATTCACAG +
Preference number: 5 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRIWPKIA*RRSDSQ
Trigger: CTGTGAATCAGAACGCCTCAATGCTATCTTGGGCCA...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp GAGAGTTGGGATCTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAAGAGAACCACAAACTGTaGAATATCCCAAACTCATTG +
Preference number: 5 (lower is better)
Translates to: ESWDLQESYMSGILTSNKENHKL*NIPNSL
Trigger: CAATGAGTTTGGGATATTCAACAGTTTGTGGTTCTC...TTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAGATCCCAACTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp GAGAGTTGGGATCTCCAAGAAAGCTATATGTCAGGGATTCTCACTTCCAACAAACGTTTCATTTTGTTGTaGTTTTTGGCACTGAAGGGT +
Preference number: 5 (lower is better)
Translates to: ESWDLQESYMSGILTSNKRFILL*FLALKG
Trigger: ACCCTTCAGTGCCAAAAACAACAACAAAATGAAACG...TTTGTTGGAAGTGAGAATCCCTGACATATAGCTTTCTTGGAGATCCCAACTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp GTTAAAGGGTTATTTCCAACTCTTCCAAGATGCAGACTCCCTAATGGTGGGTCAGTTACTCTCCCCTTATaGCAGTACAGTGTTATTTTT +
Preference number: 5 (lower is better)
Translates to: VKGLFPTLPRCRLPNGGSVTLPL*QYSVIF
Trigger: AAAAATAACACTGTACTGCAATAAGGGGAGAGTAAC...TGACCCACCATTAGGGAGTCTGCATCTTGGAAGAGTTGGAAATAACCCTTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp CTTAATCCATCTCCCTATACTCCTTCAATTATTTCCTTGGTTATCTCACTTTCTCACCCTCATCCTGAGTaGCTTTTCACCTGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: LNPSPYTPSIISLVISLSHPHPE*LFTCVL
Trigger: GAGAACACAGGTGAAAAGCAACTCAGGATGAGGGTG...AGAAAGTGAGATAACCAAGGAAATAATTGAAGGAGTATAGGGAGATGGATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATATGGGAAGCTCTATTTaGTGTGAGCTTTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHMGSSI*CELLMR
Trigger: CCTCATCAAAAGCTCACACAAAATAGAGCTTCCCAT...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp CTTAATCCATCTCCCTATACTCCTTCAATTATTTCCTTGGTTATCTCACTTTCTTTCTGTTCTGAACACTaGAATTATCGCCCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: LNPSPYTPSIISLVISLSFCSEH*NYRPQL
Trigger: AAGCTGGGGGCGATAATTCAAGTGTTCAGAACAGAA...AGAAAGTGAGATAACCAAGGAAATAATTGAAGGAGTATAGGGAGATGGATTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp ACTCTGAAGAAATATACCATACCACCTATGACCTATGAAATGGCTCTTCCACATCCAATCATACGTATATaGGAATACAACGTCCTCATG +
Preference number: 5 (lower is better)
Translates to: TLKKYTIPPMTYEMALPHPIIRI*EYNVLM
Trigger: CATGAGGACGTTGTATTCCAATATACGTATGATTGG...ATGTGGAAGAGCCATTTCATAGGTCATAGGTGGTATGGTATATTTCTTCAGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp CCAAGTTCTTTGCATCAGCATAAACTTCATACGTGTTTTCTTAAACCTAGGATAATTTTGTGTGAGCTTTaGATGAGGCTTCCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: PSSLHQHKLHTCFLKPRIILCEL*MRLPLP
Trigger: TGGAAGAGGAAGCCTCATCAAAAGCTCACACAAAAT...TATCCTAGGTTTAAGAAAACACGTATGAAGTTTATGCTGATGCAAAGAACTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS-3UTR CAA 90 bp CTTAATCCATCTCCCTATACTCCTTCAATTATTTCCTTGGTTATCTCACTTTCTCCTTTAGCATGTCAATaGCTAATGATAACCCCTAGC +
Preference number: 5 (lower is better)
Translates to: LNPSPYTPSIISLVISLSPLACQ*LMITPS
Trigger: GCTAGGGGTTATCATTAGCAATTGACATGCTAAAGG...AGAAAGTGAGATAACCAAGGAAATAATTGAAGGAGTATAGGGAGATGGATTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285900.10
ENST00000518783.1
CDS TCA 72 bp CTGAGCTCGGTCTGCCCGCTCCCCCAGCCCCCAGGCTaGAGCTGCTGGGAATGTGGGTTCAGCTGTAAGTCA +
Preference number: 6 (lower is better)
Translates to: LSSVCPLPQPPG*SCWECGFSCKS
Trigger: TGACTTACAGCTGAACCCACATTCCCAGCAGCTTCAGCCTGGGGGCTGGGGGAGCGGGCAGACCGAGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520353.5
CDS TCA 72 bp AAGGAATCGATTGCATGGACTTGGGGAAGTCATGGCTaGCCACCCGACCATTCTCTCCACTGCCGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: KESIAWTWGSHG*PPDHSLHCRRC
Trigger: GCAGCGGCGGCAGTGGAGAGAATGGTCGGGTGGTCAGCCATGACTTCCCCAAGTCCATGCAATCGATTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS TCA 72 bp CATGGCCACTCCAAGCCGCCAGCTAGCTGGAGAGGCTaGAAGAGATGGGTACTGCAGCACATGTATGCCCGA +
Preference number: 6 (lower is better)
Translates to: HGHSKPPASWRG*KRWVLQHMYAR
Trigger: TCGGGCATACATGTGCTGCAGTACCCATCTCTTTCAGCCTCTCCAGCTAGCTGGCGGCTTGGAGTGGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448073.8
ENST00000518783.1
CDS CCA 72 bp ATGCAAGGAATCGATTGCATGGACTTGGGGAAGTCATaGCTGACCACCCGACCATTCTCTCCACTGCCGCCG +
Preference number: 6 (lower is better)
Translates to: MQGIDCMDLGKS*LTTRPFSPLPP
Trigger: CGGCGGCAGTGGAGAGAATGGTCGGGTGGTCAGCCATGACTTCCCCAAGTCCATGCAATCGATTCCTTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS TCA 72 bp TCGTGTCAGGGTCTCGGGCTCCGTATTTTCCATCACTaGCAATCTCCAGACGGTAGGAGTAGCCCACGTGCT +
Preference number: 6 (lower is better)
Translates to: SCQGLGLRIFHH*QSPDGRSSPRA
Trigger: AGCACGTGGGCTACTCCTACCGTCTGGAGATTGTCAGTGATGGAAAATACGGAGCCCGAGACCCTGACACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS CCA 72 bp GAGGTGTACTTGGGTCTCTTCCAGTCCACCCGTGTGTaGTCTCGAGCATCACTATTCTTCCACTGCTGCATG +
Preference number: 6 (lower is better)
Translates to: EVYLGLFQSTRV*SRASLFFHCCM
Trigger: CATGCAGCAGTGGAAGAATAGTGATGCTCGAGACCACACACGGGTGGACTGGAAGAGACCCAAGTACACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS CCA 72 bp ATCTCAAAGCTGTCGCTGATGTTCACAATATCAATCTaGGGGAGCAGCTTCGGGGGCTCTGTGAGTTGCGAC +
Preference number: 6 (lower is better)
Translates to: ISKLSLMFTISI*GSSFGGSVSCD
Trigger: GTCGCAACTCACAGAGCCCCCGAAGCTGCTCCCCCAGATTGATATTGTGAACATCAGCGACAGCTTTGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000474198.1
ENST00000481559.6
ENST00000517469.1
ENST00000518142.5
ENST00000518783.1
ENST00000518862.5
ENST00000520353.5
ENST00000521843.6
CDS CAA 72 bp GGAAATAATCCCCCGATCTGGATATTGTTGGGGAAATaGGCACCTACTACCGCGCCTAGGAAACCGGTGCAG +
Preference number: 6 (lower is better)
Translates to: GNNPPIWILLGK*APTTAPRKPVQ
Trigger: CTGCACCGGTTTCCTAGGCGCGGTAGTAGGTGCCAATTTCCCCAACAATATCCAGATCGGGGGATTATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000474198.1
ENST00000518142.5
CDS CAA 72 bp CTGTTGCGGGGGAGGGTCGATGTCCGTATGGCTTCGTaGATGGATTGCTGTGGGATCAAACAAAAACCCTTC +
Preference number: 6 (lower is better)
Translates to: LLRGRVDVRMAS*MDCCGIKQKPF
Trigger: GAAGGGTTTTTGTTTGATCCCACAGCAATCCATCAACGAAGCCATACGGACATCGACCCTCCCCCGCAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS CAA 90 bp GCTGTTGCGGGGGAGGGTCGATGTCCGTATGGCTTCGTTGATGGATaGCTGTGGGATCAAACAAAAACCCTTCATCCGCTTGGATTCACT +
Preference number: 6 (lower is better)
Translates to: AVAGEGRCPYGFVDG*LWDQTKTLHPLGFT
Trigger: AGTGAATCCAAGCGGATGAAGGGTTTTTGTTTGATCCCACAGCAATCCATCAACGAAGCCATACGGACATCGACCCTCCCCCGCAACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS TCA 72 bp TGTTGCGGGGGAGGGTCGATGTCCGTATGGCTTCGTTaGTGGATTGCTGTGGGATCAAACAAAAACCCTTCA +
Preference number: 6 (lower is better)
Translates to: CCGGGSMSVWLR*WIAVGSNKNPS
Trigger: TGAAGGGTTTTTGTTTGATCCCACAGCAATCCATCAACGAAGCCATACGGACATCGACCCTCCCCCGCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS GCA 72 bp CCGGTATCCCTCCTCTGTGGTTGTCAAAATGTTGACTaGTGTCACCTGCCAGTTCTTCTCAGCAGCTGTATC +
Preference number: 6 (lower is better)
Translates to: PVSLLCGCQNVD*CHLPVLLSSCI
Trigger: GATACAGCTGCTGAGAAGAACTGGCAGGTGACAGCAGTCAACATTTTGACAACCACAGAGGAGGGATACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000518862.5
ENST00000520966.1
ENST00000521843.6
CDS CCA 72 bp GAAATAATCCCCCGATCTGGATATTGTTGGGGAAATTaGCACCTACTACCGCGCCTAGGAAACCGGTGCAGA +
Preference number: 6 (lower is better)
Translates to: EIIPRSGYCWGN*HLLPRLGNRCR
Trigger: TCTGCACCGGTTTCCTAGGCGCGGTAGTAGGTGCCAATTTCCCCAACAATATCCAGATCGGGGGATTATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000474198.1
ENST00000518142.5
CDS CCA 72 bp GCAACACCACCACCTACCCACAGGCCCTCCTTTCATTaGTCTAGCGCAGAAAGACATCTCAGAAATAGAAGC +
Preference number: 6 (lower is better)
Translates to: ATPPPTHRPSFH*SSAERHLRNRS
Trigger: GCTTCTATTTCTGAGATGTCTTTCTGCGCTAGACCAATGAAAGGAGGGCCTGTGGGTAGGTGGTGGTGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474198.1
CDS CAA 72 bp GGGGAGGGTCGATGTCCGTATGGCTTCGTTGATGGATaGCTGTGGGATCAAACAAAAACCCTTCATCCGCTT +
Preference number: 6 (lower is better)
Translates to: GEGRCPYGFVDG*LWDQTKTLHPL
Trigger: AAGCGGATGAAGGGTTTTTGTTTGATCCCACAGCAATCCATCAACGAAGCCATACGGACATCGACCCTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS CAA 90 bp AAGGCTCCCAGGGAGAACCACAAACTGTTGAATATCCCAAACTCATaGGACTGGTCACTGGTTGTCTGGTCCCGTCCTTCCTCAAACTCT +
Preference number: 6 (lower is better)
Translates to: KAPRENHKLLNIPNS*DWSLVVWSRPSSNS
Trigger: AGAGTTTGAGGAAGGACGGGACCAGACAACCAGTGACCAGTCCAATGAGTTTGGGATATTCAACAGTTTGTGGTTCTCCCTGGGAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS CCA 72 bp GCTGGTTTGGAAATAATCCCCCGATCTGGATATTGTTaGGGAAATTGGCACCTACTACCGCGCCTAGGAAAC +
Preference number: 6 (lower is better)
Translates to: AGLEIIPRSGYC*GNWHLLPRLGN
Trigger: GTTTCCTAGGCGCGGTAGTAGGTGCCAATTTCCCCAACAATATCCAGATCGGGGGATTATTTCCAAACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000474198.1
ENST00000518142.5
CDS CCA 72 bp GAACACTTGAATTATCGCCCCCAGCTTGGGCATCGGTaGCTGCAGGGACAAACTTATCATCTTCATTCCAGT +
Preference number: 6 (lower is better)
Translates to: EHLNYRPQLGHR*LQGQTYHLHSS
Trigger: ACTGGAATGAAGATGATAAGTTTGTCCCTGCAGCCACCGATGCCCAAGCTGGGGGCGATAATTCAAGTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS CCA 72 bp AGGTCTTTCTGGATGCTGGTCATGTCTGGTGTAAGCTaGAACTTCATAGACTCTCCTAGACCAGGGCTTCTG +
Preference number: 6 (lower is better)
Translates to: RSFWMLVMSGVS*NFIDSPRPGLL
Trigger: CAGAAGCCCTGGTCTAGGAGAGTCTATGAAGTTCCAGCTTACACCAGACATGACCAGCATCCAGAAAGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481559.6
CDS CCA 72 bp GCTGGTTTGGAAATAATCCCCCGATCTGGATATTGTTaGGGAAATTGGCACCTACTACCGCGCCTTATCCTC +
Preference number: 6 (lower is better)
Translates to: AGLEIIPRSGYC*GNWHLLPRLIL
Trigger: GAGGATAAGGCGCGGTAGTAGGTGCCAATTTCCCCAACAATATCCAGATCGGGGGATTATTTCCAAACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520353.5
CDS CAA 72 bp AGGGAGAACCACAAACTGTTGAATATCCCAAACTCATaGGACTGGTCACTGGTTGTCTGGTCCCGTCCTTCC +
Preference number: 6 (lower is better)
Translates to: RENHKLLNIPNS*DWSLVVWSRPS
Trigger: GGAAGGACGGGACCAGACAACCAGTGACCAGTCCAATGAGTTTGGGATATTCAACAGTTTGTGGTTCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS TCA 72 bp CCGGACAAGATCTATAGGTCATCTCAAAGCTGTCGCTaGTGTTCACAATATCAATCTGGGGGAGCAGCTTCG +
Preference number: 6 (lower is better)
Translates to: PDKIYRSSQSCR*CSQYQSGGAAS
Trigger: CGAAGCTGCTCCCCCAGATTGATATTGTGAACATCAGCGACAGCTTTGAGATGACCTATAGATCTTGTCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517469.1
CDS GCA 72 bp GGAAATTGGCACCTACTACCGCGCCTAGGAAACCGGTaGAGAAGAAGGCAAAAATGTGCTGCATATTCCTTT +
Preference number: 6 (lower is better)
Translates to: GNWHLLPRLGNR*RRRQKCAAYSF
Trigger: AAAGGAATATGCAGCACATTTTTGCCTTCTTCTGCACCGGTTTCCTAGGCGCGGTAGTAGGTGCCAATTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000474198.1
ENST00000518142.5
CDS GCA 72 bp TCCTCTGTGGTTGTCAAAATGTTGACTGCTGTCACCTaGCAGTTCTTCTCAGCAGCTGTATCCAGGACTTTC +
Preference number: 6 (lower is better)
Translates to: SSVVVKMLTAVT*QFFSAAVSRTF
Trigger: GAAAGTCCTGGATACAGCTGCTGAGAAGAACTGGCAGGTGACAGCAGTCAACATTTTGACAACCACAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000518862.5
ENST00000520966.1
ENST00000521843.6
CDS CCA 72 bp AATATCCCAAACTCATTGGACTGGTCACTGGTTGTCTaGTCCCGTCCTTCCTCAAACTCTTCACTGTGCCAT +
Preference number: 6 (lower is better)
Translates to: NIPNSLDWSLVV*SRPSSNSSLCH
Trigger: ATGGCACAGTGAAGAGTTTGAGGAAGGACGGGACCAGACAACCAGTGACCAGTCCAATGAGTTTGGGATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS CCA 72 bp GGTCGATGTCCGTATGGCTTCGTTGATGGATTGCTGTaGGATCAAACAAAAACCCTTCATCCGCTTGGATTC +
Preference number: 6 (lower is better)
Translates to: GRCPYGFVDGLL*DQTKTLHPLGF
Trigger: GAATCCAAGCGGATGAAGGGTTTTTGTTTGATCCCACAGCAATCCATCAACGAAGCCATACGGACATCGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS CCA 72 bp GAAATAATCCCCCGATCTGGATATTGTTGGGGAAATTaGCACCTACTACCGCGCCTTATCCTCCTTTCTGTG +
Preference number: 6 (lower is better)
Translates to: EIIPRSGYCWGN*HLLPRLILLSV
Trigger: CACAGAAAGGAGGATAAGGCGCGGTAGTAGGTGCCAATTTCCCCAACAATATCCAGATCGGGGGATTATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520353.5
CDS CAA 72 bp GGAAATAATCCCCCGATCTGGATATTGTTGGGGAAATaGGCACCTACTACCGCGCCTTATCCTCCTTTCTGT +
Preference number: 6 (lower is better)
Translates to: GNNPPIWILLGK*APTTAPYPPFC
Trigger: ACAGAAAGGAGGATAAGGCGCGGTAGTAGGTGCCAATTTCCCCAACAATATCCAGATCGGGGGATTATTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520353.5
CDS CAA 90 bp TGGAGGGCTTTCTCTTACAAAGACGAATGGCAACTGAAGTCATTTTaGCAACACCACCACCTACCCACAGGCCCTCCTTTCATTGGTCTA +
Preference number: 6 (lower is better)
Translates to: WRAFSYKDEWQLKSF*QHHHLPTGPPFIGL
Trigger: TAGACCAATGAAAGGAGGGCCTGTGGGTAGGTGGTGGTGTTGCAAAAATGACTTCAGTTGCCATTCGTCTTTGTAAGAGAAAGCCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474198.1
CDS TCA 72 bp GGGAACAGAATCTATAGGTCATCTCAAAGCTGTCGCTaGTGTTCACAATATCAATCTGGGGGAGCAGCTTCG +
Preference number: 6 (lower is better)
Translates to: GNRIYRSSQSCR*CSQYQSGGAAS
Trigger: CGAAGCTGCTCCCCCAGATTGATATTGTGAACATCAGCGACAGCTTTGAGATGACCTATAGATTCTGTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518783.1
ENST00000518862.5
ENST00000521843.6
CDS TCA 72 bp TGCACTAGGATCTATAGGTCATCTCAAAGCTGTCGCTaGTGTTCACAATATCAATCTGGGGGAGCAGCTTCG +
Preference number: 6 (lower is better)
Translates to: CTRIYRSSQSCR*CSQYQSGGAAS
Trigger: CGAAGCTGCTCCCCCAGATTGATATTGTGAACATCAGCGACAGCTTTGAGATGACCTATAGATCCTAGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492291.1
CDS TCA 72 bp CGGATAAGCATCTATAGGTCATCTCAAAGCTGTCGCTaGTGTTCACAATATCAATCTGGGGGAGCAGCTTCG +
Preference number: 6 (lower is better)
Translates to: RISIYRSSQSCR*CSQYQSGGAAS
Trigger: CGAAGCTGCTCCCCCAGATTGATATTGTGAACATCAGCGACAGCTTTGAGATGACCTATAGATGCTTATCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518142.5
CDS CCA 72 bp AACCACAAACTGTTGAATATCCCAAACTCATTGGACTaGTCACTGGTTGTCTGGTCCCGTCCTTCCTCAAAC +
Preference number: 6 (lower is better)
Translates to: NHKLLNIPNSLD*SLVVWSRPSSN
Trigger: GTTTGAGGAAGGACGGGACCAGACAACCAGTGACCAGTCCAATGAGTTTGGGATATTCAACAGTTTGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS CAA 72 bp TTCTTCTCTAGCTTTATAATCTGGCCCAAGATAGCATaGAGGCGTTCTGATTCACAGTCCACCACCACCAGC +
Preference number: 6 (lower is better)
Translates to: FFSSFIIWPKIA*RRSDSQSTTTS
Trigger: GCTGGTGGTGGTGGACTGTGAATCAGAACGCCTCAATGCTATCTTGGGCCAGATTATAAAGCTAGAGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000520966.1
ENST00000521843.6
CDS CAA 72 bp ACCAGCTGGAAACCTGTCACATTGGCGCCACTCTCCTaGAATTTGTTTAAGTCAATGTCCATGAAGCCCAGA +
Preference number: 6 (lower is better)
Translates to: TSWKPVTLAPLS*NLFKSMSMKPR
Trigger: TCTGGGCTTCATGGACATTGACTTAAACAAATTCAAGGAGAGTGGCGCCAATGTGACAGGTTTCCAGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS CAA 72 bp TTCTCTTACAAAGACGAATGGCAACTGAAGTCATTTTaGCAACACCACCACCTACCCACAGGCCCTCCTTTC +
Preference number: 6 (lower is better)
Translates to: FSYKDEWQLKSF*QHHHLPTGPPF
Trigger: GAAAGGAGGGCCTGTGGGTAGGTGGTGGTGTTGCAAAAATGACTTCAGTTGCCATTCGTCTTTGTAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474198.1
CDS TCA 72 bp TCTTCTAGGATTGTTGTGACGATGTATGTTCTGTTCTaGACACTTGAATTATCGCCCCCAGCTTGGGCATCG +
Preference number: 6 (lower is better)
Translates to: SSRIVVTMYVLF*TLELSPPAWAS
Trigger: CGATGCCCAAGCTGGGGGCGATAATTCAAGTGTTCAGAACAGAACATACATCGTCACAACAATCCTAGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS CAA 72 bp TTGCTTCCTTCCTTTCGTGAGGTTTGTCTGTTTCCCTaGGAATCCGAACACTTAAACTGCAGCGTTAACACC +
Preference number: 6 (lower is better)
Translates to: LLPSFREVCLFP*ESEHLNCSVNT
Trigger: GGTGTTAACGCTGCAGTTTAAGTGTTCGGATTCCAAGGGAAACAGACAAACCTCACGAAAGGAAGGAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285900.10
ENST00000474198.1
ENST00000518142.5
CDS CAA 72 bp TGGAAACCTGTCACATTGGCGCCACTCTCCTTGAATTaGTTTAAGTCAATGTCCATGAAGCCCAGATTTGCA +
Preference number: 6 (lower is better)
Translates to: WKPVTLAPLSLN*FKSMSMKPRFA
Trigger: TGCAAATCTGGGCTTCATGGACATTGACTTAAACAAATTCAAGGAGAGTGGCGCCAATGTGACAGGTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285900.10
ENST00000340592.9
ENST00000448073.8
ENST00000481559.6
ENST00000518142.5
ENST00000518783.1
ENST00000521843.6
CDS TCA 72 bp ATTACTTACATCTATAGGTCATCTCAAAGCTGTCGCTaGTGTTCACAATATCAATCTGGGGGAGCAGCTTCG +
Preference number: 6 (lower is better)
Translates to: ITYIYRSSQSCR*CSQYQSGGAAS
Trigger: CGAAGCTGCTCCCCCAGATTGATATTGTGAACATCAGCGACAGCTTTGAGATGACCTATAGATGTAAGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474198.1