RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRHL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000134317

Ensembl transcript IDs: ENST00000324907.14, ENST00000405379.6, ENST00000439493.5, ENST00000464418.5, ENST00000472167.5, ENST00000480736.1, ENST00000494520.1, ENST00000497403.5

Found 500 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTaGCAAACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGG +
Preference number: 1 (lower is better)
Translates to: HRPVLATWLTGVTCS*QTVRSRNTCTELLG
Trigger: CCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
3UTR GCA 90 bp ACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACACCTaGACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCTTTAGATCT +
Preference number: 1 (lower is better)
Translates to: TGVTCSCQTVRSRNT*TELLGSCGPQAFRS
Trigger: AGATCTAAAGGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472167.5
3UTR CCA 90 bp CCTGCAAGGAACCCATTCCCTCGACATAGACCTGTGCTGGCGACATaGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGA +
Preference number: 1 (lower is better)
Translates to: PARNPFPRHRPVLAT*LTGVTCSCQTVRSR
Trigger: TCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAATGGGTTCCTTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000480736.1
3UTR GCA 90 bp CCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTaGAGTTGCCAAACCGTAAGATCTAGAAACACCTGCACTGAACTC +
Preference number: 1 (lower is better)
Translates to: PRHRPVLATWLTGVT*SCQTVRSRNTCTEL
Trigger: GAGTTCAGTGCAGGTGTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
3UTR TCA 90 bp CGCTGCAAGTTGGCAAAGTGCACGTCAGGAATGAAGAGGACAGGCTaGGTATCGAGATCAATGAAGGGTTTGAAAACTGTGATATCCATT +
Preference number: 1 (lower is better)
Translates to: RCKLAKCTSGMKRTG*VSRSMKGLKTVISI
Trigger: AATGGATATCACAGTTTTCAAACCCTTCATTGATCTCGATACTCAGCCTGTCCTCTTCATTCCTGACGTGCACTTTGCCAACTTGCAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
3UTR TCA 90 bp CTTCAAAGATGGGGTTTTGAGCATCAGGGCATCAAAGACTTCTTCTaGCTCCTTTCGAACGTAGAGCAGCACTCTCTTTGGTTCTTCTAT +
Preference number: 1 (lower is better)
Translates to: LQRWGFEHQGIKDFF*LLSNVEQHSLWFFY
Trigger: ATAGAAGAACCAAAGAGAGTGCTGCTCTACGTTCGAAAGGAGTCAGAAGAAGTCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
3UTR GCA 90 bp CTATCTCTTTCACTAGTGGTTGTTCATTTAAACAAACTCCCATTTTaGTGTTACAGAAACGTGGCATTTCCCCCTGCACTCTTTATGCTG +
Preference number: 1 (lower is better)
Translates to: LSLSLVVVHLNKLPF*CYRNVAFPPALFML
Trigger: CAGCATAAAGAGTGCAGGGGGAAATGCCACGTTTCTGTAACAGCAAAATGGGAGTTTGTTTAAATGAACAACCACTAGTGAAAGAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439493.5
3UTR-3UTR TCA 90 bp CCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCACAAGGCAGTGCTGGCGACATGGCTaGCTGGGGTTACCTGCAGTT +
Preference number: 2 (lower is better)
Translates to: PFLTSASEQAHDTVGTRQCWRHG*LGLPAV
Trigger: AACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCA...CTGCCTTGTGCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
3UTR-3UTR CCA 90 bp CCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCACAAGGCAGGGCGACATGGCTGACTaGGGTTACCTGCAGTTGCCA +
Preference number: 2 (lower is better)
Translates to: PFLTSASEQAHDTVGTRQGDMAD*GYLQLP
Trigger: TGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCC...CTGCCTTGTGCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
3UTR-3UTR GCA 90 bp CCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCACAAGGCAGAGATCTAGAAACACCTaGACTGAACTCCTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: PFLTSASEQAHDTVGTRQRSRNT*TELLGS
Trigger: GCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCT...CTGCCTTGTGCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
3UTR-3UTR GCA 90 bp ACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCCCGCCTCCAACCTaGAAGGAACCCATTCCCTCG +
Preference number: 2 (lower is better)
Translates to: TKSLKPSLSPFLTSASEQAPPPT*KEPIPS
Trigger: CGAGGGAATGGGTTCCTTGCAGGTTGGAGGCGGGGC...CTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGCTTGGCTTTAAGGATTTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
3UTR-3UTR CCA 90 bp AAATCCTTAAAGCCAAGCCTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCCCTGTGCTGGCGACATaGCTGACTGGGGTTACCTGC +
Preference number: 2 (lower is better)
Translates to: KSLKPSLSPFLTSASEQAPVLAT*LTGVTC
Trigger: GCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG...GGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGCTTGGCTTTAAGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
3UTR-3UTR GCA 90 bp AGTGCCCCGCTGCAAGTTGGCAAAGTGCACGTCAGGAATGAAGAGGACAGGCTGGGTGCACAGGCTTGTTaGTGCGGTTGTTGTAACTAT +
Preference number: 2 (lower is better)
Translates to: SAPLQVGKVHVRNEEDRLGAQAC*CGCCNY
Trigger: ATAGTTACAACAACCGCAGCAACAAGCCTGTGCACC...CAGCCTGTCCTCTTCATTCCTGACGTGCACTTTGCCAACTTGCAGCGGGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
3UTR-3UTR GCA 90 bp GTACTCTTCAGGTGCGCTCCCGCTAACGTGAGGCAGTGGAGTTGTACTGAATTCAGATCTAGAAACACCTaGACTGAACTCCTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: VLFRCAPANVRQWSCTEFRSRNT*TELLGS
Trigger: GCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCT...GAATTCAGTACAACTCCACTGCCTCACGTTAGCGGGAGCGCACCTGAAGAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
3UTR-3UTR TCA 90 bp TTTCGTTCTTCATCCCTGATTTTCCGCTCAGCTCCCTTGTCACAGAAGACCTTGTCACCTCCTTCAAGGTaGTGGGATAGAACTGGCCTT +
Preference number: 2 (lower is better)
Translates to: FRSSSLIFRSAPLSQKTLSPPSR*WDRTGL
Trigger: AAGGCCAGTTCTATCCCATCACCTTGAAGGAGGTGA...CAAGGTCTTCTGTGACAAGGGAGCTGAGCGGAAAATCAGGGATGAAGAACGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
3UTR-3UTR GCA 90 bp GCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGAATAAAGTTTTCTACCACCAAGCCAGATaGAGCCCCGCCTCCAACCTG +
Preference number: 2 (lower is better)
Translates to: ADVLKLPRDSVNSWNKVFYHQAR*SPASNL
Trigger: CAGGTTGGAGGCGGGGCTGCATCTGGCTTGGTGGTA...GAAAACTTTATTCCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
3UTR-3UTR GCA 90 bp ATAAATAACGTAGCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGTACCACCAAGCCAGATaGAGCCCCGCCTCCAACCTG +
Preference number: 2 (lower is better)
Translates to: INNVADVLKLPRDSVNSWYHQAR*SPASNL
Trigger: CAGGTTGGAGGCGGGGCTGCATCTGGCTTGGTGGTA...CCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGCTACGTTATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
3UTR-3UTR GCA 90 bp AGACTTCTTCTGACTCCTTTCGAACGTAGAGCAGCACTCTCTTTGGTTCTTCTAGTGTGCTGCCGGGAGTaGCAGTACTTCCAATGCCTT +
Preference number: 2 (lower is better)
Translates to: RLLLTPFERRAALSLVLLVCCRE*QYFQCL
Trigger: AAGGCATTGGAAGTACTGGCACTCCCGGCAGCACAC...TAGAAGAACCAAAGAGAGTGCTGCTCTACGTTCGAAAGGAGTCAGAAGAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464418.5
3UTR-3UTR GCA 90 bp AAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTCTGACTTCTGCTAGCGGGGTTACCTGCAGTTaGCAAACCGTAAGATCTAGA +
Preference number: 2 (lower is better)
Translates to: KGTKSLKPSLSPFLTSASGVTCS*QTVRSR
Trigger: TCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCC...GCTAGCAGAAGTCAGAAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
3UTR-3UTR GCA 90 bp TCTGAGATAGCTTCCATCAAGCCCTTCAAAGATGGGGTTTTGAGCATCAGGGCAGGGGTTACCTGCAGTTaGCAAACCGTAAGATCTAGA +
Preference number: 2 (lower is better)
Translates to: SEIASIKPFKDGVLSIRAGVTCS*QTVRSR
Trigger: TCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCC...TGCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTGATGGAAGCTATCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472167.5
3UTR-3UTR CCA 90 bp TTTCGTTCTTCATCCCTGATTTTCCGCTCAGCTCCCTTGTCACAGAAGACCTTGTGTTCAGGTACGTCATaGTACTGTCTCCTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: FRSSSLIFRSAPLSQKTLCSGTS*YCLLAS
Trigger: AGAAGCCAGGAGACAGTACCATGACGTACCTGAACA...CAAGGTCTTCTGTGACAAGGGAGCTGAGCGGAAAATCAGGGATGAAGAACGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
3UTR CAA 90 bp GTGCACAGGCTTGTTGCTGCGGTTGTTGTAACTATAGGTATCAACTaGAATGTTAAGAGGCAACCCCTTCACTCCCTTCTGGGAAGAGAA +
Preference number: 2 (lower is better)
Translates to: VHRLVAAVVVTIGIN*NVKRQPLHSLLGRE
Trigger: TTCTCTTCCCAGAAGGGAGTGAAGGGGTTGCCTCTTAACATTCAAGTTGATACCTATAGTTACAACAACCGCAGCAACAAGCCTGTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
3UTR-3UTR GCA 90 bp TCGTATTTGTCTGAGATAGCTTCCATCAAGCCCTTCAAAGATGGGGTTTTGAGCAGATCTAGAAACACCTaGACTGAACTCCTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: SYLSEIASIKPFKDGVLSRSRNT*TELLGS
Trigger: GCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCT...GCTCAAAACCCCATCTTTGAAGGGCTTGATGGAAGCTATCTCAGACAAATACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472167.5
3UTR-3UTR CCA 90 bp AAAAGGTTTTTAGCGGGTTCCACTAAGCACAGTATTCTATCTGCTTGGTATACAGGCGACATGGCTGACTaGGGTTACCTGCAGTTGCCA +
Preference number: 2 (lower is better)
Translates to: KRFLAGSTKHSILSAWYTGDMAD*GYLQLP
Trigger: TGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCC...TGTATACCAAGCAGATAGAATACTGTGCTTAGTGGAACCCGCTAAAAACCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324907.14
3UTR-3UTR CCA 90 bp TTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCATCAAGCCCTTCAAAGAGCAGCACTCTCTTTaGTTCTTCTATCCGGGCCAG +
Preference number: 2 (lower is better)
Translates to: LSWGTSYLSEIASIKPFKEQHSL*FFYPGQ
Trigger: CTGGCCCGGATAGAAGAACCAAAGAGAGTGCTGCTC...TTTGAAGGGCTTGATGGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
3UTR-3UTR CCA 90 bp TTCTTGAATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATACCTGTGCTGGCGACATaGCTGACTGGGGTTACCTGC +
Preference number: 2 (lower is better)
Translates to: FLNIFPILSWGTSYLSEIPVLAT*LTGVTC
Trigger: GCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG...TATCTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472167.5
3UTR CAA 90 bp TATTTGTCTGAGATAGCTTCCATCAAGCCCTTCAAAGATGGGGTTTaGAGCATCAGGGCATCAAAGACTTCTTCTGACTCCTTTCGAACG +
Preference number: 2 (lower is better)
Translates to: YLSEIASIKPFKDGV*SIRASKTSSDSFRT
Trigger: CGTTCGAAAGGAGTCAGAAGAAGTCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTGATGGAAGCTATCTCAGACAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
3UTR-3UTR TCA 90 bp TGTGATATCCATTCGCTTGTGAGAGGGAAGCAGTGGCACTTTAACATCAGAAACCAGCAAAAACCACCATaGTCACACTTCGAACTTTGC +
Preference number: 2 (lower is better)
Translates to: CDIHSLVRGKQWHFNIRNQQKPP*SHFELC
Trigger: GCAAAGTTCGAAGTGTGATCATGGTGGTTTTTGCTG...GTTTCTGATGTTAAAGTGCCACTGCTTCCCTCTCACAAGCGAATGGATATCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464418.5
3UTR-3UTR TCA 90 bp TGCTTCATCGTTGATGTCCCATGTGAAGGAAATGGCGTTATACGCAATCTCCTCTTCCAATGCCTTAACTaGTCTTCTCTGCTTTTGTCT +
Preference number: 2 (lower is better)
Translates to: CFIVDVPCEGNGVIRNLLFQCLN*SSLLLS
Trigger: AGACAAAAGCAGAGAAGATCAGTTAAGGCATTGGAA...GAGGAGATTGCGTATAACGCCATTTCCTTCACATGGGACATCAACGATGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
3UTR-3UTR GCA 90 bp CACTTCTTGAATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGCTGACTGGGGTTACCTaGAGTTGCCAAACCGTAAGA +
Preference number: 2 (lower is better)
Translates to: HFLNIFPILSWGTSYLSELTGVT*SCQTVR
Trigger: TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAG...CTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472167.5
3UTR-3UTR GCA 90 bp TTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCATCAAGCCCTTCAAAGGGAAGAGAAATCTGTaGTTAAGCAGTTCACAGAGA +
Preference number: 2 (lower is better)
Translates to: LSWGTSYLSEIASIKPFKGKRNL*LSSSQR
Trigger: TCTCTGTGAACTGCTTAAGCACAGATTTCTCTTCCC...TTTGAAGGGCTTGATGGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
3UTR CAA 90 bp TCTATCTCTTTCACTAGTGGTTGTTCATTTAAACAAACTCCCATTTaGCTGTTACAGAAACGTGGCATTTCCCCCTGCACTCTTTATGCT +
Preference number: 2 (lower is better)
Translates to: SISFTSGCSFKQTPI*LLQKRGISPCTLYA
Trigger: AGCATAAAGAGTGCAGGGGGAAATGCCACGTTTCTGTAACAGCAAAATGGGAGTTTGTTTAAATGAACAACCACTAGTGAAAGAGATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439493.5
3UTR GCA 72 bp ACCTGCAGTTGCCAAACCGTAAGATCTAGAAACACCTaGACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCC +
Preference number: 3 (lower is better)
Translates to: TCSCQTVRSRNT*TELLGSCGPQA
Trigger: GGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGTTTGGCAACTGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
3UTR CCA 72 bp AACCCATTCCCTCGACATAGACCTGTGCTGGCGACATaGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTA +
Preference number: 3 (lower is better)
Translates to: NPFPRHRPVLAT*LTGVTCSCQTV
Trigger: TACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAATGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
3UTR CCA 72 bp GTACTCTTCAGGTGCGCTCCCGCTAACGTGAGGCAGTaGAGTTGTACTGAATTCAGGCAAGGGCACGAAATC +
Preference number: 3 (lower is better)
Translates to: VLFRCAPANVRQ*SCTEFRQGHEI
Trigger: GATTTCGTGCCCTTGCCTGAATTCAGTACAACTCCACTGCCTCACGTTAGCGGGAGCGCACCTGAAGAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
3UTR GCA 72 bp GTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTaGCAAACCGTAAGATCTAGAAACACCTGCACTGAA +
Preference number: 3 (lower is better)
Translates to: VLATWLTGVTCS*QTVRSRNTCTE
Trigger: TTCAGTGCAGGTGTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
3UTR-3UTR CAA 90 bp AGTGCCCCGCTGCAAGTTGGCAAAGTGCACGTCAGGAATGAAGAGGACAGGCTGACCTTTGCTTCATCGTaGATGTCCCATGTGAAGGAA +
Preference number: 3 (lower is better)
Translates to: SAPLQVGKVHVRNEEDRLTFASS*MSHVKE
Trigger: TTCCTTCACATGGGACATCAACGATGAAGCAAAGGT...CAGCCTGTCCTCTTCATTCCTGACGTGCACTTTGCCAACTTGCAGCGGGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
3UTR TCA 72 bp TGGGGTTTTGAGCATCAGGGCATCAAAGACTTCTTCTaGCTCCTTTCGAACGTAGAGCAGCACTCTCTTTGG +
Preference number: 3 (lower is better)
Translates to: WGFEHQGIKDFF*LLSNVEQHSLW
Trigger: CCAAAGAGAGTGCTGCTCTACGTTCGAAAGGAGTCAGAAGAAGTCTTTGATGCCCTGATGCTCAAAACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
3UTR TCA 72 bp TTGGCAAAGTGCACGTCAGGAATGAAGAGGACAGGCTaGGTATCGAGATCAATGAAGGGTTTGAAAACTGTG +
Preference number: 3 (lower is better)
Translates to: LAKCTSGMKRTG*VSRSMKGLKTV
Trigger: CACAGTTTTCAAACCCTTCATTGATCTCGATACTCAGCCTGTCCTCTTCATTCCTGACGTGCACTTTGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
3UTR CCA 72 bp TTTTTACACTTCTTGAATATTTTCCCAATCTTGTCATaGGGAACATCGTATTTGTCTGAGATAGCTTCCATC +
Preference number: 3 (lower is better)
Translates to: FLHFLNIFPILS*GTSYLSEIASI
Trigger: GATGGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAAGTGTAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp GTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCGCCCCGCCTCCAACCTaGAAGGAACCCATTCCCTCG +
Preference number: 4 (lower is better)
Translates to: VRSRNTCTELLGSCGPQAAPPPT*KEPIPS
Trigger: CGAGGGAATGGGTTCCTTGCAGGTTGGAGGCGGGGC...GGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000480736.1
CDS-3UTR GCA 90 bp ACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGGCCCCGCCTCCAACCTaGAAGGAACCCATTCCCTCG +
Preference number: 4 (lower is better)
Translates to: TCAGDMADWGYLQLPNRKAPPPT*KEPIPS
Trigger: CGAGGGAATGGGTTCCTTGCAGGTTGGAGGCGGGGC...CTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000480736.1
CDS-3UTR GCA 90 bp GTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCTACCACCAAGCCAGATaGAGCCCCGCCTCCAACCTG +
Preference number: 4 (lower is better)
Translates to: VRSRNTCTELLGSCGPQAYHQAR*SPASNL
Trigger: CAGGTTGGAGGCGGGGCTGCATCTGGCTTGGTGGTA...GGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR TCA 90 bp GTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCTGCTGGCGACATGGCTaGCTGGGGTTACCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: VRSRNTCTELLGSCGPQACWRHG*LGLPAV
Trigger: AACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCA...GGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR GCA 90 bp TGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCTTTAGATCTCCGTCAGGGCCGGCTTCTTCAATCTaGAGCTGGAAGGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: CTELLGSCGPQAFRSPSGPASSI*SWKVSS
Trigger: TGAGGACACCTTCCAGCTGCAGATTGAAGAAGCCGG...CCCTGACGGAGATCTAAAGGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472167.5
CDS-3UTR GCA 90 bp AACCCATTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTACCACCAAGCCAGATaGAGCCCCGCCTCCAACCTG +
Preference number: 4 (lower is better)
Translates to: NPFPRHRPVLATWLTGVTYHQAR*SPASNL
Trigger: CAGGTTGGAGGCGGGGCTGCATCTGGCTTGGTGGTA...GGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAATGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGACCTGTGCTGGCGACATaGCTGACTGGGGTTACCTGC +
Preference number: 4 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRPVLAT*LTGVTC
Trigger: GCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CCA 90 bp CGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAACCTGTGCTGGCGACATaGCTGACTGGGGTTACCTGC +
Preference number: 4 (lower is better)
Translates to: RHRPVLATWLTGVTCSCQPVLAT*LTGVTC
Trigger: GCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG...TTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR TCA 90 bp AACCCATTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCGCAATGGGAAGGACATaGGTGCCCCGCTGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: NPFPRHRPVLATWLTGVTAMGRT*VPRCKL
Trigger: CAACTTGCAGCGGGGCACTCATGTCCTTCCCATTGC...GGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAATGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR TCA 90 bp AGCCTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCTGCTGGCGACATGGCTaGCTGGGGTTACCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SLSPFLTSASEQAHDTVGCWRHG*LGLPAV
Trigger: AACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCA...GCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR TCA 90 bp ACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGTGCTGGCGACATGGCTaGCTGGGGTTACCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: TVRSRNTCTELLGSCGPQCWRHG*LGLPAV
Trigger: AACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCA...CTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR GCA 90 bp GTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCTGTTTAGCGGTGTGCTaGCGGGAGTGCCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: VRSRNTCTELLGSCGPQACLAVC*RECQYF
Trigger: GAAGTACTGGCACTCCCGGCAGCACACCGCTAAACA...GGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR GCA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCCCCGTACTCTTCAGGTaGGCTCCCGCTAACGTGAGG +
Preference number: 4 (lower is better)
Translates to: CAGDMADWGYLQLPNRKIPVLFR*APANVR
Trigger: CCTCACGTTAGCGGGAGCGCACCTGAAGAGTACGGG...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp CTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCACAGCGGCCCCGACGGGTTaGGTTTGCTTTTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: LSPFLTSASEQAHDTVGTAAPTG*VCFSRS
Trigger: AGAGCGAGAAAAGCAAACCCAACCCGTCGGGGCCGC...TGTGCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CCA 90 bp AGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTGCCGTACGGCCCCCTTGCGGCCCCGACGGGTTaGGTTTGCTTTTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SLVEGGTAKSSSVPYGPLAAPTG*VCFSRS
Trigger: AGAGCGAGAAAAGCAAACCCAACCCGTCGGGGCCGC...AAGGGGGCCGTACGGCACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CCA 90 bp AGTGCCCCGCTGCAAGTTGGCAAAGTGCACGTCAGGAATGAAGAGGACAGGCTGCCACCACCCGCTCAGTaGGCTCAGGATGATACACTG +
Preference number: 4 (lower is better)
Translates to: SAPLQVGKVHVRNEEDRLPPPAQ*AQDDTL
Trigger: CAGTGTATCATCCTGAGCCCACTGAGCGGGTGGTGG...CAGCCTGTCCTCTTCATTCCTGACGTGCACTTTGCCAACTTGCAGCGGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CCA 90 bp AACCCATTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCCCACCACCCGCTCAGTaGGCTCAGGATGATACACTG +
Preference number: 4 (lower is better)
Translates to: NPFPRHRPVLATWLTGVTPPPAQ*AQDDTL
Trigger: CAGTGTATCATCCTGAGCCCACTGAGCGGGTGGTGG...GGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAATGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CCA 90 bp GTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCTGCCCCGCTGCAAGTTaGCAAAGTGCACGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: VRSRNTCTELLGSCGPQACPAAS*QSARQE
Trigger: TTCCTGACGTGCACTTTGCCAACTTGCAGCGGGGCA...GGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CCA 90 bp CGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAGGCGACATGGCTGACTaGGGTTACCTGCAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: RHRPVLATWLTGVTCSCQGDMAD*GYLQLP
Trigger: TGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCC...TTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CCA 90 bp CAAACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCCTGTGCTGGCGACATaGCTGACTGGGGTTACCTGC +
Preference number: 4 (lower is better)
Translates to: QTVRSRNTCTELLGSCGPPVLAT*LTGVTC
Trigger: GCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG...CGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR TCA 90 bp AACCCATTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCCCTGAACGCCTTCCTTaGAGGTCTCTGAGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: NPFPRHRPVLATWLTGVTPERLP*RSLRRS
Trigger: CGACCTTCTCAGAGACCTTCAAGGAAGGCGTTCAGG...GGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAATGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR TCA 90 bp CGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAACCTGAACGCCTTCCTTaGAGGTCTCTGAGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: RHRPVLATWLTGVTCSCQPERLP*RSLRRS
Trigger: CGACCTTCTCAGAGACCTTCAAGGAAGGCGTTCAGG...TTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR TCA 90 bp CCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCACAAGGCAGCAGGCATCCGCAGACTaGGATCCGAGGGGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: PFLTSASEQAHDTVGTRQQASAD*DPRGRK
Trigger: TTTTCTTCCCCTCGGATCTCAGTCTGCGGATGCCTG...CTGCCTTGTGCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR TCA 90 bp AACCCATTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCCAGGCATCCGCAGACTaGGATCCGAGGGGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: NPFPRHRPVLATWLTGVTQASAD*DPRGRK
Trigger: TTTTCTTCCCCTCGGATCTCAGTCTGCGGATGCCTG...GGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAATGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR TCA 90 bp ACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGGCCTATCGCCTTTTCTaGCTTCTGCTAGCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TCAGDMADWGYLQLPNRKAYRLF*LLLASR
Trigger: CCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGC...CTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR TCA 90 bp CTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAGCGCTCCCGCTAACGTaGGGCAGTGGAGTTGTACTG +
Preference number: 4 (lower is better)
Translates to: LATWLTGVTCSCQTVRSRALPLT*GSGVVL
Trigger: CAGTACAACTCCACTGCCTCACGTTAGCGGGAGCGC...TCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR GCA 90 bp CGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAGGCCTCTCTTATCAATaGCCAGCTGGTTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: RHRPVLATWLTGVTCSCQGLSYQ*PAGCHG
Trigger: CCCATGGCAACCAGCTGGGCATTGATAAGAGAGGCC...TTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR GCA 90 bp CGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAATGTTTAGCGGTGTGCTaGCGGGAGTGCCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: RHRPVLATWLTGVTCSCQCLAVC*RECQYF
Trigger: GAAGTACTGGCACTCCCGGCAGCACACCGCTAAACA...TTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR GCA 90 bp CGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAACTTTGTTTAGCGGTGTaGTGCCGGGAGTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: RHRPVLATWLTGVTCSCQLCLAV*CRECQY
Trigger: GTACTGGCACTCCCGGCAGCACACCGCTAAACAAAG...TTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CCA 90 bp TGGTTCTTCTATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCGCCGGGCCGCAGAACTaGACTTTCGGGTTGGGACAG +
Preference number: 4 (lower is better)
Translates to: WFFYPGQLGRRRDSKVIFAGPQN*TFGLGQ
Trigger: CTGTCCCAACCCGAAAGTCCAGTTCTGCGGCCCGGC...GAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGAAGAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CCA 90 bp CAAACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGGGCGACATGGCTGACTaGGGTTACCTGCAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: QTVRSRNTCTELLGSCGPGDMAD*GYLQLP
Trigger: TGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCC...CGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR TCA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCCTTTGGTCGCTGCAGTaGGAGGGTTTTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: CAGDMADWGYLQLPNRKILWSLQ*EGFPGR
Trigger: CCTTCCTGGAAAACCCTCTCACTGCAGCGACCAAAG...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR TCA 90 bp AGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTGCCGTACGGCCCCCTTCTTTGGTCGCTGCAGTaGGAGGGTTTTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLVEGGTAKSSSVPYGPLLWSLQ*EGFPGR
Trigger: CCTTCCTGGAAAACCCTCTCACTGCAGCGACCAAAG...AAGGGGGCCGTACGGCACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR TCA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGAGGGAAGAAAACCTCCTaGACGCCTTCCTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRGKKTS*TPSLKV
Trigger: GACCTTCAAGGAAGGCGTTCAGGAGGTTTTCTTCCC...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR TCA 90 bp ACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGGCAGTGGAGTTGTACTaGATTCAGGCAAGGGCACGA +
Preference number: 4 (lower is better)
Translates to: TCAGDMADWGYLQLPNRKAVELY*IQARAR
Trigger: TCGTGCCCTTGCCTGAATTCAGTACAACTCCACTGC...CTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR GCA 90 bp ACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGCAATGCCCAGCTGGTTaGCATGGGGAAGGACAATGT +
Preference number: 4 (lower is better)
Translates to: TVRSRNTCTELLGSCGPQQCPAG*HGEGQC
Trigger: ACATTGTCCTTCCCCATGGCAACCAGCTGGGCATTG...CTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR GCA 90 bp AGTGCCCCGCTGCAAGTTGGCAAAGTGCACGTCAGGAATGAAGAGGACAGGCTGCAATGCCCAGCTGGTTaGCATGGGGAAGGACAATGT +
Preference number: 4 (lower is better)
Translates to: SAPLQVGKVHVRNEEDRLQCPAG*HGEGQC
Trigger: ACATTGTCCTTCCCCATGGCAACCAGCTGGGCATTG...CAGCCTGTCCTCTTCATTCCTGACGTGCACTTTGCCAACTTGCAGCGGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR GCA 90 bp GTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCGATGGATTCCTTCACTaGTGCTCACCTCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: VRSRNTCTELLGSCGPQADGFLH*CSPPSR
Trigger: CCTTGAAGGAGGTGAGCAGCAGTGAAGGAATCCATC...GGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR GCA 90 bp TCTATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTGCCGTGTTTAGCGGTGTGCTaGCGGGAGTGCCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: SIRASLVEGGTAKSSSVPCLAVC*RECQYF
Trigger: GAAGTACTGGCACTCCCGGCAGCACACCGCTAAACA...CGGCACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp CTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCACACTTTGTTTAGCGGTGTaGTGCCGGGAGTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: LSPFLTSASEQAHDTVGTLCLAV*CRECQY
Trigger: GTACTGGCACTCCCGGCAGCACACCGCTAAACAAAG...TGTGCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR GCA 90 bp CAAACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGTGGGAAGGACATGAGTaGCCCGCTGCAAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: QTVRSRNTCTELLGSCGPWEGHE*PAASWQ
Trigger: TTGCCAACTTGCAGCGGGGCACTCATGTCCTTCCCA...CGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR GCA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGACCGGCTTCTTCAATCTaGAGCTGGAAGGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRPASSI*SWKVSS
Trigger: TGAGGACACCTTCCAGCTGCAGATTGAAGAAGCCGG...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR GCA 90 bp CGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAACCGGCTTCTTCAATCTaGAGCTGGAAGGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RHRPVLATWLTGVTCSCQPASSI*SWKVSS
Trigger: TGAGGACACCTTCCAGCTGCAGATTGAAGAAGCCGG...TTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CCA 90 bp AGCCTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCAGGATGATACACTGCTaGGGGGATTCCCACAGCGAA +
Preference number: 4 (lower is better)
Translates to: SLSPFLTSASEQAHDTVGRMIHC*GDSHSE
Trigger: TTCGCTGTGGGAATCCCCCCAGCAGTGTATCATCCT...GCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp ACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGAGGATGATACACTGCTaGGGGGATTCCCACAGCGAA +
Preference number: 4 (lower is better)
Translates to: TVRSRNTCTELLGSCGPQRMIHC*GDSHSE
Trigger: TTCGCTGTGGGAATCCCCCCAGCAGTGTATCATCCT...CTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CCA 90 bp AACCCATTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTCGCCTTTGAGCATTTaGGGCTTGAGCACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: NPFPRHRPVLATWLTGVTSPLSI*GLSTRA
Trigger: AGCTCTGGTGCTCAAGCCCCAAATGCTCAAAGGCGA...GGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAATGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CCA 90 bp CCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCACAAGGCAGTCGCCTTTGAGCATTTaGGGCTTGAGCACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PFLTSASEQAHDTVGTRQSPLSI*GLSTRA
Trigger: AGCTCTGGTGCTCAAGCCCCAAATGCTCAAAGGCGA...CTGCCTTGTGCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp CTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCACATGCCCCGCTGCAAGTTaGCAAAGTGCACGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LSPFLTSASEQAHDTVGTCPAAS*QSARQE
Trigger: TTCCTGACGTGCACTTTGCCAACTTGCAGCGGGGCA...TGTGCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp ACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGGAGCAGCACTCTCTTTaGTTCTTCTATCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TCAGDMADWGYLQLPNRKEQHSL*FFYPGQ
Trigger: CTGGCCCGGATAGAAGAACCAAAGAGAGTGCTGCTC...CTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CCA 90 bp GTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCCAAGCCCTTCAAAGATaGGGTTTTGAGCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: VRSRNTCTELLGSCGPQAQALQR*GFEHQG
Trigger: GCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTG...GGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CCA 90 bp GCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACCCTGTGCTGGCGACATaGCTGACTGGGGTTACCTGC +
Preference number: 4 (lower is better)
Translates to: ATWLTGVTCSCQTVRSRNPVLAT*LTGVTC
Trigger: GCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG...GTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR TCA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGAATATCCATTCGCTTGTaGGAGGGAAGCAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRISIRL*EGSSGT
Trigger: AGTGCCACTGCTTCCCTCTCACAAGCGAATGGATAT...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR TCA 90 bp GCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACGCAATGGGAAGGACATaGGTGCCCCGCTGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: ATWLTGVTCSCQTVRSRNAMGRT*VPRCKL
Trigger: CAACTTGCAGCGGGGCACTCATGTCCTTCCCATTGC...GTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR GCA 90 bp AGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTGCCGTACGGCCCCCTTCAATGCCCAGCTGGTTaGCATGGGGAAGGACAATGT +
Preference number: 4 (lower is better)
Translates to: SLVEGGTAKSSSVPYGPLQCPAG*HGEGQC
Trigger: ACATTGTCCTTCCCCATGGCAACCAGCTGGGCATTG...AAGGGGGCCGTACGGCACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp TTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTGTGGGTAGGCATCGTTaGTATGGAGACAGTGACTGT +
Preference number: 4 (lower is better)
Translates to: FPRHRPVLATWLTGVTCSVGRHR*YGDSDC
Trigger: ACAGTCACTGTCTCCATAGCAACGATGCCTACCCAC...ACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR GCA 90 bp AACCCATTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCGATGGATTCCTTCACTaGTGCTCACCTCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: NPFPRHRPVLATWLTGVTDGFLH*CSPPSR
Trigger: CCTTGAAGGAGGTGAGCAGCAGTGAAGGAATCCATC...GGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAATGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR GCA 90 bp AGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAGATGGATTCCTTCACTaGTGCTCACCTCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: RPVLATWLTGVTCSCQTVDGFLH*CSPPSR
Trigger: CCTTGAAGGAGGTGAGCAGCAGTGAAGGAATCCATC...TACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR GCA 90 bp GTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCTGCAAGTTGGCAAAGTaGACGTCAGGAATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: VRSRNTCTELLGSCGPQACKLAK*TSGMKR
Trigger: CCTCTTCATTCCTGACGTGCACTTTGCCAACTTGCA...GGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR GCA 90 bp ACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGAGATCTAGAAACACCTaGACTGAACTCCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TVRSRNTCTELLGSCGPQRSRNT*TELLGS
Trigger: GCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCT...CTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR GCA 90 bp AACCCATTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCCTGACTGGGGTTACCTaGAGTTGCCAAACCGTAAGA +
Preference number: 4 (lower is better)
Translates to: NPFPRHRPVLATWLTGVTLTGVT*SCQTVR
Trigger: TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAG...GGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAATGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR GCA 90 bp AAATCCTTAAAGCCAAGCCTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCCCCGTACTCTTCAGGTaGGCTCCCGCTAACGTGAGG +
Preference number: 4 (lower is better)
Translates to: KSLKPSLSPFLTSASEQAPVLFR*APANVR
Trigger: CCTCACGTTAGCGGGAGCGCACCTGAAGAGTACGGG...GGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGCTTGGCTTTAAGGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp CCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCACAAGGCAGTTATCAATGCCCAGCTaGTTGCCATGGGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: PFLTSASEQAHDTVGTRQLSMPS*LPWGRT
Trigger: TGTCCTTCCCCATGGCAACCAGCTGGGCATTGATAA...CTGCCTTGTGCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CCA 90 bp ACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGTCTGGAGCTGTCAGATaGCCTCTCTTATCAATGCCC +
Preference number: 4 (lower is better)
Translates to: TCAGDMADWGYLQLPNRKSGAVR*PLLSMP
Trigger: GGGCATTGATAAGAGAGGCCATCTGACAGCTCCAGA...CTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR CCA 90 bp CGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAAGTGACTGTCGTATCTaGAGCTGTCAGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RHRPVLATWLTGVTCSCQSDCRI*SCQMAS
Trigger: AGAGGCCATCTGACAGCTCCAGATACGACAGTCACT...TTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CCA 90 bp ACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGCACAGCGAAGCCATGTaGCTGGGTTTCTGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: TCAGDMADWGYLQLPNRKHSEAM*LGFCLD
Trigger: ATCAAGACAGAAACCCAGCCACATGGCTTCGCTGTG...CTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CCA 90 bp AAGTCATCTTCTGTGCCGTACGGCCCCCTTTTCAAGACAGAGCCTTCACCCTCCAGGATGATACACTGCTaGGGGGATTCCCACAGCGAA +
Preference number: 4 (lower is better)
Translates to: KSSSVPYGPLFKTEPSPSRMIHC*GDSHSE
Trigger: TTCGCTGTGGGAATCCCCCCAGCAGTGTATCATCCT...GGAGGGTGAAGGCTCTGTCTTGAAAAGGGGGCCGTACGGCACAGAAGATGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CCA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCAGGATGATACACTGCTaGGGGGATTCCCACAGCGAA +
Preference number: 4 (lower is better)
Translates to: CAGDMADWGYLQLPNRKIRMIHC*GDSHSE
Trigger: TTCGCTGTGGGAATCCCCCCAGCAGTGTATCATCCT...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CCA 90 bp GCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACCCACCACCCGCTCAGTaGGCTCAGGATGATACACTG +
Preference number: 4 (lower is better)
Translates to: ATWLTGVTCSCQTVRSRNPPPAQ*AQDDTL
Trigger: CAGTGTATCATCCTGAGCCCACTGAGCGGGTGGTGG...GTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CCA 90 bp AGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCTTTATTCTTCAGAGGCAATaGGAAGGACATGAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: RSRNTCTELLGSCGPQAFILQRQ*EGHECP
Trigger: GGGGCACTCATGTCCTTCCCATTGCCTCTGAAGAAT...AAAGGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472167.5
CDS-3UTR CCA 90 bp CCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCACAAGGCAGCAAGCCCTTCAAAGATaGGGTTTTGAGCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: PFLTSASEQAHDTVGTRQQALQR*GFEHQG
Trigger: GCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTG...CTGCCTTGTGCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR TCA 90 bp CTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCACATTCCTTGAAGGTCTCTaGGAAGGTCGAGTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LSPFLTSASEQAHDTVGTFLEGL*EGRVWS
Trigger: ACTCCAGACTCGACCTTCTCAGAGACCTTCAAGGAA...TGTGCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR TCA 90 bp CTGTGCCGTACGGCCCCCTTTTCAAGACAGAGCCTTCACCCTCCAATTCTTCAGTTCCTTGAAGGTCTCTaGGAAGGTCGAGTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LCRTAPFSRQSLHPPILQFLEGL*EGRVWS
Trigger: ACTCCAGACTCGACCTTCTCAGAGACCTTCAAGGAA...CTGAAGAATTGGAGGGTGAAGGCTCTGTCTTGAAAAGGGGGCCGTACGGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR TCA 90 bp CTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCACATCACCTCCTTCAAGGTaGTGGGATAGAACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LSPFLTSASEQAHDTVGTSPPSR*WDRTGL
Trigger: AAGGCCAGTTCTATCCCATCACCTTGAAGGAGGTGA...TGTGCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR TCA 90 bp TCTATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTGCCGTTCGTTCTTCATCCCTaGTTTTCCGCTCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SIRASLVEGGTAKSSSVPFVLHP*FSAQLP
Trigger: AGGGAGCTGAGCGGAAAATCAGGGATGAAGAACGAA...CGGCACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR TCA 90 bp CTCTTCAGGTGCGCTCCCGCTAACGTGAGGCAGTGGAGTTGTACTGAATTCAGGATATCCATTCGCTTGTaGGAGGGAAGCAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: LFRCAPANVRQWSCTEFRISIRL*EGSSGT
Trigger: AGTGCCACTGCTTCCCTCTCACAAGCGAATGGATAT...CCTGAATTCAGTACAACTCCACTGCCTCACGTTAGCGGGAGCGCACCTGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR TCA 90 bp TCTATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTGCCGATATCCATTCGCTTGTaGGAGGGAAGCAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: SIRASLVEGGTAKSSSVPISIRL*EGSSGT
Trigger: AGTGCCACTGCTTCCCTCTCACAAGCGAATGGATAT...CGGCACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR TCA 90 bp GTACTCTTCAGGTGCGCTCCCGCTAACGTGAGGCAGTGGAGTTGTACTGAATTCGCAGTGGAGTTGTACTaGATTCAGGCAAGGGCACGA +
Preference number: 4 (lower is better)
Translates to: VLFRCAPANVRQWSCTEFAVELY*IQARAR
Trigger: TCGTGCCCTTGCCTGAATTCAGTACAACTCCACTGC...GAATTCAGTACAACTCCACTGCCTCACGTTAGCGGGAGCGCACCTGAAGAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR GCA 90 bp GTACTCTTCAGGTGCGCTCCCGCTAACGTGAGGCAGTGGAGTTGTACTGAATTCCATCGCTTTGGTCGCTaGAGTGAGAGGGTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: VLFRCAPANVRQWSCTEFHRFGR*SERVFQ
Trigger: CTGGAAAACCCTCTCACTGCAGCGACCAAAGCGATG...GAATTCAGTACAACTCCACTGCCTCACGTTAGCGGGAGCGCACCTGAAGAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR GCA 90 bp TGGTTCTTCTATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCGTGTGCTGCCGGGAGTaGCAGTACTTCCAATGCCTT +
Preference number: 4 (lower is better)
Translates to: WFFYPGQLGRRRDSKVIFVCCRE*QYFQCL
Trigger: AAGGCATTGGAAGTACTGGCACTCCCGGCAGCACAC...GAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGAAGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp TTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTGGTGCACAGGCTTGTTaGTGCGGTTGTTGTAACTAT +
Preference number: 4 (lower is better)
Translates to: FPRHRPVLATWLTGVTCSGAQAC*CGCCNY
Trigger: ATAGTTACAACAACCGCAGCAACAAGCCTGTGCACC...ACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR GCA 90 bp AGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTATGCAAGTTGGCAAAGTaGACGTCAGGAATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RPVLATWLTGVTCSCQTVCKLAK*TSGMKR
Trigger: CCTCTTCATTCCTGACGTGCACTTTGCCAACTTGCA...TACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR GCA 90 bp CAAACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAAAGTCATCTTCTGTaGCGTACGGCCCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: QTVRSRNTCTELLGSCGPQSHLL*RTAPFS
Trigger: TGAAAAGGGGGCCGTACGGCACAGAAGATGACTTTG...CGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR GCA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCCAAAGTCATCTTCTGTaGCGTACGGCCCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: CAGDMADWGYLQLPNRKIQSHLL*RTAPFS
Trigger: TGAAAAGGGGGCCGTACGGCACAGAAGATGACTTTG...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR GCA 90 bp CAAACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGAGATCTAGAAACACCTaGACTGAACTCCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: QTVRSRNTCTELLGSCGPRSRNT*TELLGS
Trigger: GCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCT...CGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR GCA 90 bp CGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAGGGGTTACCTGCAGTTaGCAAACCGTAAGATCTAGA +
Preference number: 4 (lower is better)
Translates to: RHRPVLATWLTGVTCSCQGVTCS*QTVRSR
Trigger: TCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCC...TTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR GCA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGAGGGGTTACCTGCAGTTaGCAAACCGTAAGATCTAGA +
Preference number: 4 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRGVTCS*QTVRSR
Trigger: TCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCC...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR GCA 90 bp CTCTTCAGGTGCGCTCCCGCTAACGTGAGGCAGTGGAGTTGTACTGAATTCAGGCTGACTGGGGTTACCTaGAGTTGCCAAACCGTAAGA +
Preference number: 4 (lower is better)
Translates to: LFRCAPANVRQWSCTEFRLTGVT*SCQTVR
Trigger: TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAG...CCTGAATTCAGTACAACTCCACTGCCTCACGTTAGCGGGAGCGCACCTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR GCA 90 bp CAAACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCTGACTGGGGTTACCTaGAGTTGCCAAACCGTAAGA +
Preference number: 4 (lower is better)
Translates to: QTVRSRNTCTELLGSCGPLTGVT*SCQTVR
Trigger: TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAG...CGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR GCA 90 bp ACTGAATTCAGGCAAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTCTGCCCCGCCTCCAACCTaGAAGGAACCCATTCCCTCG +
Preference number: 4 (lower is better)
Translates to: TEFRQGHEILKAKPIAFSAPPPT*KEPIPS
Trigger: CGAGGGAATGGGTTCCTTGCAGGTTGGAGGCGGGGC...AGAAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTTGCCTGAATTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp CAAACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGGTAGGACCGCCGCTGTaGATAAAGTGCTTCATTCTG +
Preference number: 4 (lower is better)
Translates to: QTVRSRNTCTELLGSCGPVGPPL*IKCFIL
Trigger: CAGAATGAAGCACTTTATCCACAGCGGCGGTCCTAC...CGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR CCA 90 bp TCTATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTGCCGTTATCAATGCCCAGCTaGTTGCCATGGGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: SIRASLVEGGTAKSSSVPLSMPS*LPWGRT
Trigger: TGTCCTTCCCCATGGCAACCAGCTGGGCATTGATAA...CGGCACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp CTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCACAAGTGACTGTCGTATCTaGAGCTGTCAGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LSPFLTSASEQAHDTVGTSDCRI*SCQMAS
Trigger: AGAGGCCATCTGACAGCTCCAGATACGACAGTCACT...TGTGCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp ACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGTCTGTCTTGATGGAGTaGGTAGGCATCGTTGCTATG +
Preference number: 4 (lower is better)
Translates to: TVRSRNTCTELLGSCGPQSVLME*VGIVAM
Trigger: CATAGCAACGATGCCTACCCACTCCATCAAGACAGA...CTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CCA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCCACAGCGAAGCCATGTaGCTGGGTTTCTGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: CAGDMADWGYLQLPNRKIHSEAM*LGFCLD
Trigger: ATCAAGACAGAAACCCAGCCACATGGCTTCGCTGTG...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CCA 90 bp GTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCGTGAGAGGGAAGCAGTaGCACTTTAACATCAGAAAC +
Preference number: 4 (lower is better)
Translates to: VRSRNTCTELLGSCGPQAVRGKQ*HFNIRN
Trigger: GTTTCTGATGTTAAAGTGCCACTGCTTCCCTCTCAC...GGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CCA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCATTCTTCAGAGGCAATaGGAAGGACATGAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: CAGDMADWGYLQLPNRKIILQRQ*EGHECP
Trigger: GGGGCACTCATGTCCTTCCCATTGCCTCTGAAGAAT...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CCA 90 bp CTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAGAGCAGCACTCTCTTTaGTTCTTCTATCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LATWLTGVTCSCQTVRSREQHSL*FFYPGQ
Trigger: CTGGCCCGGATAGAAGAACCAAAGAGAGTGCTGCTC...TCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CCA 90 bp AGCCTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCTCTTCAATCTGCAGCTaGAAGGTGTCCTCATTGGAG +
Preference number: 4 (lower is better)
Translates to: SLSPFLTSASEQAHDTVGSSICS*KVSSLE
Trigger: CTCCAATGAGGACACCTTCCAGCTGCAGATTGAAGA...GCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp GATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCTTTATCTTCAATCTGCAGCTaGAAGGTGTCCTCATTGGAG +
Preference number: 4 (lower is better)
Translates to: DLETPALNSWGAVARRPLSSICS*KVSSLE
Trigger: CTCCAATGAGGACACCTTCCAGCTGCAGATTGAAGA...TAAAGGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472167.5
CDS-3UTR CCA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTTCAATCTGCAGCTaGAAGGTGTCCTCATTGGAG +
Preference number: 4 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRSSICS*KVSSLE
Trigger: CTCCAATGAGGACACCTTCCAGCTGCAGATTGAAGA...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CCA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATTTCAAGACAGAGCTTaGCCTCCCAAAGTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRFQDRA*PPKVLE
Trigger: TTCCAGCACTTTGGGAGGCCAAGCTCTGTCTTGAAA...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480736.1
CDS-3UTR TCA 90 bp AACCCATTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGTCTTCATCTCCATTaGTGCTCATCATCGCTTTGG +
Preference number: 4 (lower is better)
Translates to: NPFPRHRPVLATWLTGVTCLHLH*CSSSLW
Trigger: CCAAAGCGATGATGAGCATCAATGGAGATGAAGACA...GGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAATGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR TCA 90 bp TGGTTCTTCTATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCGGGAAGAAAACCTCCTaGACGCCTTCCTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: WFFYPGQLGRRRDSKVIFGKKTS*TPSLKV
Trigger: GACCTTCAAGGAAGGCGTTCAGGAGGTTTTCTTCCC...GAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGAAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472167.5
CDS-3UTR TCA 90 bp AGCCTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCCACTTCGAACTTTGCTaGTGGGATGATGGATTCCTT +
Preference number: 4 (lower is better)
Translates to: SLSPFLTSASEQAHDTVGHFELC*WDDGFL
Trigger: AAGGAATCCATCATCCCATCAGCAAAGTTCGAAGTG...GCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR TCA 90 bp ACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGCACTTCGAACTTTGCTaGTGGGATGATGGATTCCTT +
Preference number: 4 (lower is better)
Translates to: TVRSRNTCTELLGSCGPQHFELC*WDDGFL
Trigger: AAGGAATCCATCATCCCATCAGCAAAGTTCGAAGTG...CTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR TCA 90 bp GTACTCTTCAGGTGCGCTCCCGCTAACGTGAGGCAGTGGAGTTGTACTGAATTCTTCGTTCTTCATCCCTaGTTTTCCGCTCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: VLFRCAPANVRQWSCTEFFVLHP*FSAQLP
Trigger: AGGGAGCTGAGCGGAAAATCAGGGATGAAGAACGAA...GAATTCAGTACAACTCCACTGCCTCACGTTAGCGGGAGCGCACCTGAAGAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR TCA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGAATGAAGAGGACAGGCTaGGTATCGAGATCAATGAAG +
Preference number: 4 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRMKRTG*VSRSMK
Trigger: CTTCATTGATCTCGATACTCAGCCTGTCCTCTTCAT...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR TCA 90 bp ACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATGAAGAGGACAGGCTaGGTATCGAGATCAATGAAG +
Preference number: 4 (lower is better)
Translates to: TCAGDMADWGYLQLPNRKMKRTG*VSRSMK
Trigger: CTTCATTGATCTCGATACTCAGCCTGTCCTCTTCAT...CTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR TCA 90 bp AGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCTTTAGATCTATGAAGAGGACAGGCTaGGTATCGAGATCAATGAAG +
Preference number: 4 (lower is better)
Translates to: RNTCTELLGSCGPQAFRSMKRTG*VSRSMK
Trigger: CTTCATTGATCTCGATACTCAGCCTGTCCTCTTCAT...AGATCTAAAGGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472167.5
CDS-3UTR TCA 90 bp TCTGAGATAGCTTCCATCAAGCCCTTCAAAGATGGGGTTTTGAGCATCAGGGCAGCAATGGGAAGGACATaGGTGCCCCGCTGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: SEIASIKPFKDGVLSIRAAMGRT*VPRCKL
Trigger: CAACTTGCAGCGGGGCACTCATGTCCTTCCCATTGC...TGCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTGATGGAAGCTATCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR TCA 90 bp GTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCATCAAAGACTTCTTCTaGCTCCTTTCGAACGTAGAG +
Preference number: 4 (lower is better)
Translates to: VRSRNTCTELLGSCGPQAIKDFF*LLSNVE
Trigger: CTCTACGTTCGAAAGGAGTCAGAAGAAGTCTTTGAT...GGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR TCA 90 bp AAATCCTTAAAGCCAAGCCTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCGCCTATCGCCTTTTCTaGCTTCTGCTAGCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: KSLKPSLSPFLTSASEQAAYRLF*LLLASR
Trigger: CCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGC...GGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGCTTGGCTTTAAGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR GCA 90 bp ACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGTATGCTGTTTCTTTTaGTGTGATCTGGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: TVRSRNTCTELLGSCGPQVCCFF*CDLAQG
Trigger: ACCCTGAGCCAGATCACAGCAAAAGAAACAGCATAC...CTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR GCA 90 bp GTACTCTTCAGGTGCGCTCCCGCTAACGTGAGGCAGTGGAGTTGTACTGAATTCGTGGGTAGGCATCGTTaGTATGGAGACAGTGACTGT +
Preference number: 4 (lower is better)
Translates to: VLFRCAPANVRQWSCTEFVGRHR*YGDSDC
Trigger: ACAGTCACTGTCTCCATAGCAACGATGCCTACCCAC...GAATTCAGTACAACTCCACTGCCTCACGTTAGCGGGAGCGCACCTGAAGAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR GCA 90 bp TTCTTCTATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTTGTTTAGCGGTGTGCTaGCGGGAGTGCCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: FFYPGQLGRRRDSKVIFCCLAVC*RECQYF
Trigger: GAAGTACTGGCACTCCCGGCAGCACACCGCTAAACA...ACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp CTCTTCAGGTGCGCTCCCGCTAACGTGAGGCAGTGGAGTTGTACTGAATTCAGGGCACAGGCTTGTTGCTaGGGTTGTTGTAACTATAGG +
Preference number: 4 (lower is better)
Translates to: LFRCAPANVRQWSCTEFRAQACC*GCCNYR
Trigger: CCTATAGTTACAACAACCGCAGCAACAAGCCTGTGC...CCTGAATTCAGTACAACTCCACTGCCTCACGTTAGCGGGAGCGCACCTGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR GCA 90 bp CACCCTCCAATTCTTCAGAGGCAATGGGAAGGACATGAGTGCCCCGCTGCAAGTGCACAGGCTTGTTGCTaGGGTTGTTGTAACTATAGG +
Preference number: 4 (lower is better)
Translates to: HPPILQRQWEGHECPAASAQACC*GCCNYR
Trigger: CCTATAGTTACAACAACCGCAGCAACAAGCCTGTGC...ACTTGCAGCGGGGCACTCATGTCCTTCCCATTGCCTCTGAAGAATTGGAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR GCA 90 bp AAGTCATCTTCTGTGCCGTACGGCCCCCTTTTCAAGACAGAGCCTTCACCCTCCGGTGCACAGGCTTGTTaGTGCGGTTGTTGTAACTAT +
Preference number: 4 (lower is better)
Translates to: KSSSVPYGPLFKTEPSPSGAQAC*CGCCNY
Trigger: ATAGTTACAACAACCGCAGCAACAAGCCTGTGCACC...GGAGGGTGAAGGCTCTGTCTTGAAAAGGGGGCCGTACGGCACAGAAGATGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR GCA 90 bp CTCTTCAGGTGCGCTCCCGCTAACGTGAGGCAGTGGAGTTGTACTGAATTCAGGGGGGTTACCTGCAGTTaGCAAACCGTAAGATCTAGA +
Preference number: 4 (lower is better)
Translates to: LFRCAPANVRQWSCTEFRGVTCS*QTVRSR
Trigger: TCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCC...CCTGAATTCAGTACAACTCCACTGCCTCACGTTAGCGGGAGCGCACCTGAAGAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp GGGCTGCTCTGTCACAATTGGTATGCTGTTTCTATCTCTTTCACTAGTGGTTGTGCCGGGCCGCAGAACTaGACTTTCGGGTTGGGACAG +
Preference number: 4 (lower is better)
Translates to: GLLCHNWYAVSISFTSGCAGPQN*TFGLGQ
Trigger: CTGTCCCAACCCGAAAGTCCAGTTCTGCGGCCCGGC...ACAACCACTAGTGAAAGAGATAGAAACAGCATACCAATTGTGACAGAGCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR CCA 90 bp AGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTGCCGTACGGCCCCCTTCTGAAGAACCAACACTaGCCGTTTGTTGTCGTACTC +
Preference number: 4 (lower is better)
Translates to: SLVEGGTAKSSSVPYGPLLKNQH*PFVVVL
Trigger: GAGTACGACAACAAACGGCCAGTGTTGGTTCTTCAG...AAGGGGGCCGTACGGCACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472167.5
CDS-3UTR CCA 90 bp GTAGAAGGAGGGACAGCAAAGTCATCTTCTGTGCCGTACGGCCCCCTTTTCAAGGTAGGACCGCCGCTGTaGATAAAGTGCTTCATTCTG +
Preference number: 4 (lower is better)
Translates to: VEGGTAKSSSVPYGPLFKVGPPL*IKCFIL
Trigger: CAGAATGAAGCACTTTATCCACAGCGGCGGTCCTAC...CTTGAAAAGGGGGCCGTACGGCACAGAAGATGACTTTGCTGTCCCTCCTTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CCA 90 bp CTTCACCCTCCAATTCTTCAGAGGCAATGGGAAGGACATGAGTGCCCCGCTGCATCTGTCTTGATGGAGTaGGTAGGCATCGTTGCTATG +
Preference number: 4 (lower is better)
Translates to: LHPPILQRQWEGHECPAASVLME*VGIVAM
Trigger: CATAGCAACGATGCCTACCCACTCCATCAAGACAGA...TGCAGCGGGGCACTCATGTCCTTCCCATTGCCTCTGAAGAATTGGAGGGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CCA 90 bp GTAGAAGGAGGGACAGCAAAGTCATCTTCTGTGCCGTACGGCCCCCTTTTCAAGCACAGCGAAGCCATGTaGCTGGGTTTCTGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: VEGGTAKSSSVPYGPLFKHSEAM*LGFCLD
Trigger: ATCAAGACAGAAACCCAGCCACATGGCTTCGCTGTG...CTTGAAAAGGGGGCCGTACGGCACAGAAGATGACTTTGCTGTCCCTCCTTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CCA 90 bp AAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTCTGACTTCTGCTAGCCCACCACCCGCTCAGTaGGCTCAGGATGATACACTG +
Preference number: 4 (lower is better)
Translates to: KGTKSLKPSLSPFLTSASPPPAQ*AQDDTL
Trigger: CAGTGTATCATCCTGAGCCCACTGAGCGGGTGGTGG...GCTAGCAGAAGTCAGAAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp CTCTTCAGGTGCGCTCCCGCTAACGTGAGGCAGTGGAGTTGTACTGAATTCAGGGCACCAGAGCTGAACTaGTCAGTATTGAGATTCCGA +
Preference number: 4 (lower is better)
Translates to: LFRCAPANVRQWSCTEFRAPELN*SVLRFR
Trigger: TCGGAATCTCAATACTGACCAGTTCAGCTCTGGTGC...CCTGAATTCAGTACAACTCCACTGCCTCACGTTAGCGGGAGCGCACCTGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp GCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACGAGCAGCACTCTCTTTaGTTCTTCTATCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ATWLTGVTCSCQTVRSRNEQHSL*FFYPGQ
Trigger: CTGGCCCGGATAGAAGAACCAAAGAGAGTGCTGCTC...GTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CCA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCGCTAACGTGAGGCAGTaGAGTTGTACTGAATTCAGG +
Preference number: 4 (lower is better)
Translates to: CAGDMADWGYLQLPNRKIANVRQ*SCTEFR
Trigger: CCTGAATTCAGTACAACTCCACTGCCTCACGTTAGC...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTTTAACATCAGAAACTaGGAGCTGGGGTCAGGACAC +
Preference number: 4 (lower is better)
Translates to: CAGDMADWGYLQLPNRKIFNIRN*ELGSGH
Trigger: GTGTCCTGACCCCAGCTCCCAGTTTCTGATGTTAAA...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472167.5
CDS-3UTR TCA 90 bp GCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACTCACCTCCTTCAAGGTaGTGGGATAGAACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: ATWLTGVTCSCQTVRSRNSPPSR*WDRTGL
Trigger: AAGGCCAGTTCTATCCCATCACCTTGAAGGAGGTGA...GTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR TCA 90 bp CTCTTCAGGTGCGCTCCCGCTAACGTGAGGCAGTGGAGTTGTACTGAATTCAGGCACTTCGAACTTTGCTaGTGGGATGATGGATTCCTT +
Preference number: 4 (lower is better)
Translates to: LFRCAPANVRQWSCTEFRHFELC*WDDGFL
Trigger: AAGGAATCCATCATCCCATCAGCAAAGTTCGAAGTG...CCTGAATTCAGTACAACTCCACTGCCTCACGTTAGCGGGAGCGCACCTGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR TCA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCCAGCAAAAACCACCATaGTCACACTTCGAACTTTGC +
Preference number: 4 (lower is better)
Translates to: CAGDMADWGYLQLPNRKIQQKPP*SHFELC
Trigger: GCAAAGTTCGAAGTGTGATCATGGTGGTTTTTGCTG...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR TCA 90 bp AAGTCATCTTCTGTGCCGTACGGCCCCCTTTTCAAGACAGAGCCTTCACCCTCCCAGCAAAAACCACCATaGTCACACTTCGAACTTTGC +
Preference number: 4 (lower is better)
Translates to: KSSSVPYGPLFKTEPSPSQQKPP*SHFELC
Trigger: GCAAAGTTCGAAGTGTGATCATGGTGGTTTTTGCTG...GGAGGGTGAAGGCTCTGTCTTGAAAAGGGGGCCGTACGGCACAGAAGATGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR TCA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGAAGCAGTTCACAGAGATaGAAACCTTTGCTTCATCGT +
Preference number: 4 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRSSSQR*KPLLHR
Trigger: ACGATGAAGCAAAGGTTTTCATCTCTGTGAACTGCT...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR TCA 90 bp AGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGCAGTTCACAGAGATaGAAACCTTTGCTTCATCGT +
Preference number: 4 (lower is better)
Translates to: RPVLATWLTGVTCSCQTVSSSQR*KPLLHR
Trigger: ACGATGAAGCAAAGGTTTTCATCTCTGTGAACTGCT...TACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR TCA 90 bp TGGTTCTTCTATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCATATCCATTCGCTTGTaGGAGGGAAGCAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: WFFYPGQLGRRRDSKVIFISIRL*EGSSGT
Trigger: AGTGCCACTGCTTCCCTCTCACAAGCGAATGGATAT...GAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGAAGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR TCA 90 bp ACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGATCAAAGACTTCTTCTaGCTCCTTTCGAACGTAGAG +
Preference number: 4 (lower is better)
Translates to: TVRSRNTCTELLGSCGPQIKDFF*LLSNVE
Trigger: CTCTACGTTCGAAAGGAGTCAGAAGAAGTCTTTGAT...CTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR TCA 90 bp CTGTGCCGTACGGCCCCCTTTTCAAGACAGAGCCTTCACCCTCCAATTCTTCAGTCAAAGATGGGGTTTTaGGCATCAGGGCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: LCRTAPFSRQSLHPPILQSKMGF*ASGHQR
Trigger: TCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGA...CTGAAGAATTGGAGGGTGAAGGCTCTGTCTTGAAAAGGGGGCCGTACGGCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR TCA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTCAAAGATGGGGTTTTaGGCATCAGGGCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: CAGDMADWGYLQLPNRKISKMGF*ASGHQR
Trigger: TCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGA...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR GCA 90 bp AGTGCCCCGCTGCAAGTTGGCAAAGTGCACGTCAGGAATGAAGAGGACAGGCTGCCGCTGTGGATAAAGTaGTTCATTCTGAAGAACCAA +
Preference number: 4 (lower is better)
Translates to: SAPLQVGKVHVRNEEDRLPLWIK*FILKNQ
Trigger: TTGGTTCTTCAGAATGAAGCACTTTATCCACAGCGG...CAGCCTGTCCTCTTCATTCCTGACGTGCACTTTGCCAACTTGCAGCGGGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR GCA 90 bp ACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGCCGCTGTGGATAAAGTaGTTCATTCTGAAGAACCAA +
Preference number: 4 (lower is better)
Translates to: TVRSRNTCTELLGSCGPQPLWIK*FILKNQ
Trigger: TTGGTTCTTCAGAATGAAGCACTTTATCCACAGCGG...CTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR GCA 90 bp CTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAGCACAGGCTTGTTGCTaGGGTTGTTGTAACTATAGG +
Preference number: 4 (lower is better)
Translates to: LATWLTGVTCSCQTVRSRAQACC*GCCNYR
Trigger: CCTATAGTTACAACAACCGCAGCAACAAGCCTGTGC...TCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR GCA 90 bp CTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAGGTGCACAGGCTTGTTaGTGCGGTTGTTGTAACTAT +
Preference number: 4 (lower is better)
Translates to: LATWLTGVTCSCQTVRSRGAQAC*CGCCNY
Trigger: ATAGTTACAACAACCGCAGCAACAAGCCTGTGCACC...TCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CCA 90 bp TTAAACAAACTCCCATTTTGCTGTTACAGAAACGTGGCATTTCCCCCTGCACTCGCGGCCCCGACGGGTTaGGTTTGCTTTTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: LNKLPFCCYRNVAFPPALAAPTG*VCFSRS
Trigger: AGAGCGAGAAAAGCAAACCCAACCCGTCGGGGCCGC...GAGTGCAGGGGGAAATGCCACGTTTCTGTAACAGCAAAATGGGAGTTTGTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR CCA 90 bp AAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTCTGACTTCTGCTAGCACTGGACTTTCGGGTTaGGACAGTACACCCGATCCG +
Preference number: 4 (lower is better)
Translates to: KGTKSLKPSLSPFLTSASTGLSG*DSTPDP
Trigger: CGGATCGGGTGTACTGTCCCAACCCGAAAGTCCAGT...GCTAGCAGAAGTCAGAAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CCA 90 bp GCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACGTAGGACCGCCGCTGTaGATAAAGTGCTTCATTCTG +
Preference number: 4 (lower is better)
Translates to: ATWLTGVTCSCQTVRSRNVGPPL*IKCFIL
Trigger: CAGAATGAAGCACTTTATCCACAGCGGCGGTCCTAC...GTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR CCA 90 bp TATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTGCCGTATCTGTCTTGATGGAGTaGGTAGGCATCGTTGCTATG +
Preference number: 4 (lower is better)
Translates to: YPGQLGRRRDSKVIFCAVSVLME*VGIVAM
Trigger: CATAGCAACGATGCCTACCCACTCCATCAAGACAGA...TACGGCACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp TATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTGCCGTAGCACCAGAGCTGAACTaGTCAGTATTGAGATTCCGA +
Preference number: 4 (lower is better)
Translates to: YPGQLGRRRDSKVIFCAVAPELN*SVLRFR
Trigger: TCGGAATCTCAATACTGACCAGTTCAGCTCTGGTGC...TACGGCACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp TGGTTCTTCTATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCCAAGCCCTTCAAAGATaGGGTTTTGAGCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: WFFYPGQLGRRRDSKVIFQALQR*GFEHQG
Trigger: GCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTG...GAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGAAGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp GCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACCAAGCCCTTCAAAGATaGGGTTTTGAGCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: ATWLTGVTCSCQTVRSRNQALQR*GFEHQG
Trigger: GCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTG...GTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CCA 90 bp CGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAGGAAGGTGTCCTCATTaGAGTAATGCTTCACAATGT +
Preference number: 4 (lower is better)
Translates to: RHRPVLATWLTGVTCSCQGRCPH*SNASQC
Trigger: ACATTGTGAAGCATTACTCCAATGAGGACACCTTCC...TTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR TCA 90 bp AAATCCTTAAAGCCAAGCCTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCTTGCTATGGAGACAGTaGCTGTCGTATCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KSLKPSLSPFLTSASEQALLWRQ*LSYLEL
Trigger: CAGCTCCAGATACGACAGTCACTGTCTCCATAGCAA...GGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGCTTGGCTTTAAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR TCA 90 bp ACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACACCTTGCTATGGAGACAGTaGCTGTCGTATCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TWLTGVTCSCQTVRSRNTLLWRQ*LSYLEL
Trigger: CAGCTCCAGATACGACAGTCACTGTCTCCATAGCAA...GGTGTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR TCA 90 bp TTCTTCTATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTTTCCTTGAAGGTCTCTaGGAAGGTCGAGTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: FFYPGQLGRRRDSKVIFCFLEGL*EGRVWS
Trigger: ACTCCAGACTCGACCTTCTCAGAGACCTTCAAGGAA...ACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR TCA 90 bp CTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGATCAAAGATGGGGTTTTaGGCATCAGGGCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: LATWLTGVTCSCQTVRSRSKMGF*ASGHQR
Trigger: TCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGA...TCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR TCA 90 bp AGACTTCTTCTGACTCCTTTCGAACGTAGAGCAGCACTCTCTTTGGTTCTTCTATGCTGGCGACATGGCTaGCTGGGGTTACCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: RLLLTPFERRAALSLVLLCWRHG*LGLPAV
Trigger: AACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCA...TAGAAGAACCAAAGAGAGTGCTGCTCTACGTTCGAAAGGAGTCAGAAGAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472167.5
CDS-3UTR GCA 90 bp TATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTGCCGTAGTATGCTGTTTCTTTTaGTGTGATCTGGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: YPGQLGRRRDSKVIFCAVVCCFF*CDLAQG
Trigger: ACCCTGAGCCAGATCACAGCAAAAGAAACAGCATAC...TACGGCACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp GTACTGAATTCAGGCAAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTGTGTGCTGCCGGGAGTaGCAGTACTTCCAATGCCTT +
Preference number: 4 (lower is better)
Translates to: VLNSGKGTKSLKPSLSPFVCCRE*QYFQCL
Trigger: AAGGCATTGGAAGTACTGGCACTCCCGGCAGCACAC...AAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTTGCCTGAATTCAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR GCA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCGGGAAGAGAAATCTGTaGTTAAGCAGTTCACAGAGA +
Preference number: 4 (lower is better)
Translates to: CAGDMADWGYLQLPNRKIGKRNL*LSSSQR
Trigger: TCTCTGTGAACTGCTTAAGCACAGATTTCTCTTCCC...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR GCA 90 bp ACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACACCAGATCTAGAAACACCTaGACTGAACTCCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TWLTGVTCSCQTVRSRNTRSRNT*TELLGS
Trigger: GCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCT...GGTGTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR GCA 90 bp TGGTTCTTCTATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCGGGGTTACCTGCAGTTaGCAAACCGTAAGATCTAGA +
Preference number: 4 (lower is better)
Translates to: WFFYPGQLGRRRDSKVIFGVTCS*QTVRSR
Trigger: TCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCC...GAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGAAGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472167.5
CDS-3UTR GCA 90 bp ACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACACCCTGACTGGGGTTACCTaGAGTTGCCAAACCGTAAGA +
Preference number: 4 (lower is better)
Translates to: TWLTGVTCSCQTVRSRNTLTGVT*SCQTVR
Trigger: TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAG...GGTGTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR GCA 90 bp ACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGAGAAGGTTTTGCTATaGTACAGAATGCCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: TVRSRNTCTELLGSCGPQEKVLL*YRMPVF
Trigger: AAACACAGGCATTCTGTAGCATAGCAAAACCTTCTC...CTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CCA 90 bp GCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGAATAAAGTTTTCGCCGGGCCGCAGAACTaGACTTTCGGGTTGGGACAG +
Preference number: 4 (lower is better)
Translates to: ADVLKLPRDSVNSWNKVFAGPQN*TFGLGQ
Trigger: CTGTCCCAACCCGAAAGTCCAGTTCTGCGGCCCGGC...GAAAACTTTATTCCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CCA 90 bp CGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAACTGCTCTGTCACAATTaGTATGCTGTTTCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: RHRPVLATWLTGVTCSCQLLCHN*YAVSFA
Trigger: AGCAAAAGAAACAGCATACCAATTGTGACAGAGCAG...TTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR CCA 90 bp TTCTTCTATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTCACAGCGAAGCCATGTaGCTGGGTTTCTGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: FFYPGQLGRRRDSKVIFCHSEAM*LGFCLD
Trigger: ATCAAGACAGAAACCCAGCCACATGGCTTCGCTGTG...ACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp TCTGAGATAGCTTCCATCAAGCCCTTCAAAGATGGGGTTTTGAGCATCAGGGCATCGCCTTTGAGCATTTaGGGCTTGAGCACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SEIASIKPFKDGVLSIRASPLSI*GLSTRA
Trigger: AGCTCTGGTGCTCAAGCCCCAAATGCTCAAAGGCGA...TGCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTGATGGAAGCTATCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp CTTTTCAAGACAGAGCCTTCACCCTCCAATTCTTCAGAGGCAATGGGAAGGACAGAGCAGCACTCTCTTTaGTTCTTCTATCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LFKTEPSPSNSSEAMGRTEQHSL*FFYPGQ
Trigger: CTGGCCCGGATAGAAGAACCAAAGAGAGTGCTGCTC...TGTCCTTCCCATTGCCTCTGAAGAATTGGAGGGTGAAGGCTCTGTCTTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CCA 90 bp AGCCTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCTTCCCAATCTTGTCATaGGGAACATCGTATTTGTCT +
Preference number: 4 (lower is better)
Translates to: SLSPFLTSASEQAHDTVGFPILS*GTSYLS
Trigger: AGACAAATACGATGTTCCCCATGACAAGATTGGGAA...GCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp ACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGTTCCCAATCTTGTCATaGGGAACATCGTATTTGTCT +
Preference number: 4 (lower is better)
Translates to: TVRSRNTCTELLGSCGPQFPILS*GTSYLS
Trigger: AGACAAATACGATGTTCCCCATGACAAGATTGGGAA...CTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CCA 90 bp AGTGCCCCGCTGCAAGTTGGCAAAGTGCACGTCAGGAATGAAGAGGACAGGCTGTTCCCAATCTTGTCATaGGGAACATCGTATTTGTCT +
Preference number: 4 (lower is better)
Translates to: SAPLQVGKVHVRNEEDRLFPILS*GTSYLS
Trigger: AGACAAATACGATGTTCCCCATGACAAGATTGGGAA...CAGCCTGTCCTCTTCATTCCTGACGTGCACTTTGCCAACTTGCAGCGGGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CCA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATTCCCAATCTTGTCATaGGGAACATCGTATTTGTCT +
Preference number: 4 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRFPILS*GTSYLS
Trigger: AGACAAATACGATGTTCCCCATGACAAGATTGGGAA...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CCA 90 bp CAAACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGGGAAGGTGTCCTCATTaGAGTAATGCTTCACAATGT +
Preference number: 4 (lower is better)
Translates to: QTVRSRNTCTELLGSCGPGRCPH*SNASQC
Trigger: ACATTGTGAAGCATTACTCCAATGAGGACACCTTCC...CGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CCA 90 bp CTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCACAGGAAGGTGTCCTCATTaGAGTAATGCTTCACAATGT +
Preference number: 4 (lower is better)
Translates to: LSPFLTSASEQAHDTVGTGRCPH*SNASQC
Trigger: ACATTGTGAAGCATTACTCCAATGAGGACACCTTCC...TGTGCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp GCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACGCTAACGTGAGGCAGTaGAGTTGTACTGAATTCAGG +
Preference number: 4 (lower is better)
Translates to: ATWLTGVTCSCQTVRSRNANVRQ*SCTEFR
Trigger: CCTGAATTCAGTACAACTCCACTGCCTCACGTTAGC...GTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp ACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGTCGAGTTGTATCACTTaGTACGCAATACTTGCAATC +
Preference number: 4 (lower is better)
Translates to: TVRSRNTCTELLGSCGPQSSCIT*YAILAI
Trigger: GATTGCAAGTATTGCGTACCAAGTGATACAACTCGA...CTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR TCA 90 bp AACAAACTCCCATTTTGCTGTTACAGAAACGTGGCATTTCCCCCTGCACTCTTTCTTTGGTCGCTGCAGTaGGAGGGTTTTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: NKLPFCCYRNVAFPPALFLWSLQ*EGFPGR
Trigger: CCTTCCTGGAAAACCCTCTCACTGCAGCGACCAAAG...AAAGAGTGCAGGGGGAAATGCCACGTTTCTGTAACAGCAAAATGGGAGTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR TCA 90 bp CTTTTCAAGACAGAGCCTTCACCCTCCAATTCTTCAGAGGCAATGGGAAGGACATTGCTATGGAGACAGTaGCTGTCGTATCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LFKTEPSPSNSSEAMGRTLLWRQ*LSYLEL
Trigger: CAGCTCCAGATACGACAGTCACTGTCTCCATAGCAA...TGTCCTTCCCATTGCCTCTGAAGAATTGGAGGGTGAAGGCTCTGTCTTGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR TCA 90 bp TGTGATATCCATTCGCTTGTGAGAGGGAAGCAGTGGCACTTTAACATCAGAAACCCTGAACGCCTTCCTTaGAGGTCTCTGAGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: CDIHSLVRGKQWHFNIRNPERLP*RSLRRS
Trigger: CGACCTTCTCAGAGACCTTCAAGGAAGGCGTTCAGG...GTTTCTGATGTTAAAGTGCCACTGCTTCCCTCTCACAAGCGAATGGATATCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR TCA 90 bp GCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACTCAAAGATGGGGTTTTaGGCATCAGGGCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: ATWLTGVTCSCQTVRSRNSKMGF*ASGHQR
Trigger: TCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGA...GTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR TCA 90 bp ACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGCAAAGTTGTTCCTCCTaGACGCCTTCCTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TKSLKPSLSPFLTSASEQQSCSS*TPSLKV
Trigger: GACCTTCAAGGAAGGCGTTCAGGAGGAACAACTTTG...CTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGCTTGGCTTTAAGGATTTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405379.6
CDS-3UTR GCA 90 bp TGCTTCACAATGTTGTCGTCCATGTTCACCAGGATCCCCTTTTTACACTTCTTGGGCCTCTCTTATCAATaGCCAGCTGGTTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: CFTMLSSMFTRIPFLHFLGLSYQ*PAGCHG
Trigger: CCCATGGCAACCAGCTGGGCATTGATAAGAGAGGCC...CAAGAAGTGTAAAAAGGGGATCCTGGTGAACATGGACGACAACATTGTGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp TTTCGTTCTTCATCCCTGATTTTCCGCTCAGCTCCCTTGTCACAGAAGACCTTGGTGGGTAGGCATCGTTaGTATGGAGACAGTGACTGT +
Preference number: 4 (lower is better)
Translates to: FRSSSLIFRSAPLSQKTLVGRHR*YGDSDC
Trigger: ACAGTCACTGTCTCCATAGCAACGATGCCTACCCAC...CAAGGTCTTCTGTGACAAGGGAGCTGAGCGGAAAATCAGGGATGAAGAACGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR GCA 90 bp ATCAAGCCCTTCAAAGATGGGGTTTTGAGCATCAGGGCATCAAAGACTTCTTCTGTGTGCTGCCGGGAGTaGCAGTACTTCCAATGCCTT +
Preference number: 4 (lower is better)
Translates to: IKPFKDGVLSIRASKTSSVCCRE*QYFQCL
Trigger: AAGGCATTGGAAGTACTGGCACTCCCGGCAGCACAC...AGAAGAAGTCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp ATCAAGCCCTTCAAAGATGGGGTTTTGAGCATCAGGGCATCAAAGACTTCTTCTCTTTGTTTAGCGGTGTaGTGCCGGGAGTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: IKPFKDGVLSIRASKTSSLCLAV*CRECQY
Trigger: GTACTGGCACTCCCGGCAGCACACCGCTAAACAAAG...AGAAGAAGTCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp CACCCTCCAATTCTTCAGAGGCAATGGGAAGGACATGAGTGCCCCGCTGCAAGTAGAGATGAAAACCTTTaGTTCATCGTTGATGTCCCA +
Preference number: 4 (lower is better)
Translates to: HPPILQRQWEGHECPAASRDENL*FIVDVP
Trigger: TGGGACATCAACGATGAAGCAAAGGTTTTCATCTCT...ACTTGCAGCGGGGCACTCATGTCCTTCCCATTGCCTCTGAAGAATTGGAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR GCA 90 bp AGACTTCTTCTGACTCCTTTCGAACGTAGAGCAGCACTCTCTTTGGTTCTTCTATGGGAAGGACATGAGTaGCCCGCTGCAAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: RLLLTPFERRAALSLVLLWEGHE*PAASWQ
Trigger: TTGCCAACTTGCAGCGGGGCACTCATGTCCTTCCCA...TAGAAGAACCAAAGAGAGTGCTGCTCTACGTTCGAAAGGAGTCAGAAGAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp TGCTTCACAATGTTGTCGTCCATGTTCACCAGGATCCCCTTTTTACACTTCTTGTGGGAAGGACATGAGTaGCCCGCTGCAAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: CFTMLSSMFTRIPFLHFLWEGHE*PAASWQ
Trigger: TTGCCAACTTGCAGCGGGGCACTCATGTCCTTCCCA...CAAGAAGTGTAAAAAGGGGATCCTGGTGAACATGGACGACAACATTGTGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp ACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGCAAAGTCATCTTCTGTaGCGTACGGCCCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: TKSLKPSLSPFLTSASEQQSHLL*RTAPFS
Trigger: TGAAAAGGGGGCCGTACGGCACAGAAGATGACTTTG...CTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGCTTGGCTTTAAGGATTTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp AGGGGCTGCTCTGTCACAATTGGTATGCTGTTTCTATCTCTTTCACTAGTGGTTACTGGACTTTCGGGTTaGGACAGTACACCCGATCCG +
Preference number: 4 (lower is better)
Translates to: RGCSVTIGMLFLSLSLVVTGLSG*DSTPDP
Trigger: CGGATCGGGTGTACTGTCCCAACCCGAAAGTCCAGT...AACCACTAGTGAAAGAGATAGAAACAGCATACCAATTGTGACAGAGCAGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR CCA 90 bp GGTATCAACTTGAATGTTAAGAGGCAACCCCTTCACTCCCTTCTGGGAAGAGAATCTTTTGCTGTGATCTaGCTCAGGGTGCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: GINLNVKRQPLHSLLGRESFAVI*LRVLHL
Trigger: GAGGTGGAGCACCCTGAGCCAGATCACAGCAAAAGA...TTCTCTTCCCAGAAGGGAGTGAAGGGGTTGCCTCTTAACATTCAAGTTGATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CCA 90 bp AAATCCTTAAAGCCAAGCCTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCTCTGTCTTGATGGAGTaGGTAGGCATCGTTGCTATG +
Preference number: 4 (lower is better)
Translates to: KSLKPSLSPFLTSASEQASVLME*VGIVAM
Trigger: CATAGCAACGATGCCTACCCACTCCATCAAGACAGA...GGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGCTTGGCTTTAAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp CTCCCATTTTGCTGTTACAGAAACGTGGCATTTCCCCCTGCACTCTTTATGCTGGCTGTTACAGAAACGTaGCATTTCCCCCTGCACTCT +
Preference number: 4 (lower is better)
Translates to: LPFCCYRNVAFPPALFMLAVTET*HFPLHS
Trigger: AGAGTGCAGGGGGAAATGCCACGTTTCTGTAACAGC...CAGCATAAAGAGTGCAGGGGGAAATGCCACGTTTCTGTAACAGCAAAATGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR TCA 90 bp ACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACACCAAAAACATAGTCCTCTaGATTCATGCCAGGCATCCG +
Preference number: 4 (lower is better)
Translates to: TWLTGVTCSCQTVRSRNTKNIVL*IHARHP
Trigger: CGGATGCCTGGCATGAATTCAGAGGACTATGTTTTT...GGTGTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR TCA 90 bp ACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACACCCAGCAAAAACCACCATaGTCACACTTCGAACTTTGC +
Preference number: 4 (lower is better)
Translates to: TWLTGVTCSCQTVRSRNTQQKPP*SHFELC
Trigger: GCAAAGTTCGAAGTGTGATCATGGTGGTTTTTGCTG...GGTGTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR TCA 90 bp CTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGATTCCAATGCCTTAACTaGTCTTCTCTGCTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LATWLTGVTCSCQTVRSRFQCLN*SSLLLS
Trigger: AGACAAAAGCAGAGAAGATCAGTTAAGGCATTGGAA...TCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR TCA 90 bp GGGCTGCTCTGTCACAATTGGTATGCTGTTTCTATCTCTTTCACTAGTGGTTGTTGTTACCTTTTGCTGTaGTCTGGCTCAGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLLCHNWYAVSISFTSGCCYLLL*SGSGCS
Trigger: GGAGCACCCTGAGCCAGATCACAGCAAAAGGTAACA...ACAACCACTAGTGAAAGAGATAGAAACAGCATACCAATTGTGACAGAGCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR GCA 90 bp TGTTCAGGTACGTCATGGTACTGTCTCCTGGCTTCTGTCGAAGTGATTTTGAAGCAAAGTCATCTTCTGTaGCGTACGGCCCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: CSGTSWYCLLASVEVILKQSHLL*RTAPFS
Trigger: TGAAAAGGGGGCCGTACGGCACAGAAGATGACTTTG...CTTCAAAATCACTTCGACAGAAGCCAGGAGACAGTACCATGACGTACCTGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR GCA 90 bp CCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCATCAAGCCCCAAAGTCATCTTCTGTaGCGTACGGCCCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: PILSWGTSYLSEIASIKPQSHLL*RTAPFS
Trigger: TGAAAAGGGGGCCGTACGGCACAGAAGATGACTTTG...GGGCTTGATGGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAAGATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp AGACTTCTTCTGACTCCTTTCGAACGTAGAGCAGCACTCTCTTTGGTTCTTCTACCGGCTTCTTCAATCTaGAGCTGGAAGGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RLLLTPFERRAALSLVLLPASSI*SWKVSS
Trigger: TGAGGACACCTTCCAGCTGCAGATTGAAGAAGCCGG...TAGAAGAACCAAAGAGAGTGCTGCTCTACGTTCGAAAGGAGTCAGAAGAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp GTACTGAATTCAGGCAAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTAGATCTAGAAACACCTaGACTGAACTCCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VLNSGKGTKSLKPSLSPFRSRNT*TELLGS
Trigger: GCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCT...AAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTTGCCTGAATTCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR GCA 90 bp CAAACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGGCACAGTATTCTATCTaGTTGGTATACACGATCAAA +
Preference number: 4 (lower is better)
Translates to: QTVRSRNTCTELLGSCGPAQYSI*LVYTIK
Trigger: TTTGATCGTGTATACCAAGCAGATAGAATACTGTGC...CGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR GCA 90 bp CTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGACATTTGAGAAGGTTTTaGTATGCTACAGAATGCCTG +
Preference number: 4 (lower is better)
Translates to: LATWLTGVTCSCQTVRSRHLRRF*YATECL
Trigger: CAGGCATTCTGTAGCATAGCAAAACCTTCTCAAATG...TCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CCA 90 bp GTACTGAATTCAGGCAAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTAGTGACTGTCGTATCTaGAGCTGTCAGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: VLNSGKGTKSLKPSLSPFSDCRI*SCQMAS
Trigger: AGAGGCCATCTGACAGCTCCAGATACGACAGTCACT...AAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTTGCCTGAATTCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp TGTGATATCCATTCGCTTGTGAGAGGGAAGCAGTGGCACTTTAACATCAGAAACTCGCCTTTGAGCATTTaGGGCTTGAGCACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: CDIHSLVRGKQWHFNIRNSPLSI*GLSTRA
Trigger: AGCTCTGGTGCTCAAGCCCCAAATGCTCAAAGGCGA...GTTTCTGATGTTAAAGTGCCACTGCTTCCCTCTCACAAGCGAATGGATATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CCA 90 bp ACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACACCGTGAGAGGGAAGCAGTaGCACTTTAACATCAGAAAC +
Preference number: 4 (lower is better)
Translates to: TWLTGVTCSCQTVRSRNTVRGKQ*HFNIRN
Trigger: GTTTCTGATGTTAAAGTGCCACTGCTTCCCTCTCAC...GGTGTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CCA 90 bp GTACTGAATTCAGGCAAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTATTCTTCAGAGGCAATaGGAAGGACATGAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: VLNSGKGTKSLKPSLSPFILQRQ*EGHECP
Trigger: GGGGCACTCATGTCCTTCCCATTGCCTCTGAAGAAT...AAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTTGCCTGAATTCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp ACTGAATTCAGGCAAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTCTCAAGCCCTTCAAAGATaGGGTTTTGAGCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: TEFRQGHEILKAKPIAFSQALQR*GFEHQG
Trigger: GCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTG...AGAAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTTGCCTGAATTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp ATAAATAACGTAGCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGGGCGACATGGCTGACTaGGGTTACCTGCAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: INNVADVLKLPRDSVNSWGDMAD*GYLQLP
Trigger: TGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCC...CCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGCTACGTTATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp GGCTGCTCTGTCACAATTGGTATGCTGTTTCTATCTCTTTCACTAGTGGTTGTTCCTTTTGCTGTGATCTaGCTCAGGGTGCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: GCSVTIGMLFLSLSLVVVPFAVI*LRVLHL
Trigger: GAGGTGGAGCACCCTGAGCCAGATCACAGCAAAAGG...AACAACCACTAGTGAAAGAGATAGAAACAGCATACCAATTGTGACAGAGCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR TCA 90 bp AACGTAGCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGAATAAACCTGAACGCCTTCCTTaGAGGTCTCTGAGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: NVADVLKLPRDSVNSWNKPERLP*RSLRRS
Trigger: CGACCTTCTCAGAGACCTTCAAGGAAGGCGTTCAGG...TTTATTCCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGCTACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR TCA 90 bp TGTGATATCCATTCGCTTGTGAGAGGGAAGCAGTGGCACTTTAACATCAGAAACTCACCTCCTTCAAGGTaGTGGGATAGAACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: CDIHSLVRGKQWHFNIRNSPPSR*WDRTGL
Trigger: AAGGCCAGTTCTATCCCATCACCTTGAAGGAGGTGA...GTTTCTGATGTTAAAGTGCCACTGCTTCCCTCTCACAAGCGAATGGATATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR TCA 90 bp TGCTTCACAATGTTGTCGTCCATGTTCACCAGGATCCCCTTTTTACACTTCTTGTCACCTCCTTCAAGGTaGTGGGATAGAACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: CFTMLSSMFTRIPFLHFLSPPSR*WDRTGL
Trigger: AAGGCCAGTTCTATCCCATCACCTTGAAGGAGGTGA...CAAGAAGTGTAAAAAGGGGATCCTGGTGAACATGGACGACAACATTGTGAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR TCA 90 bp CACTTCTTGAATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGGCAATGGGAAGGACATaGGTGCCCCGCTGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: HFLNIFPILSWGTSYLSEAMGRT*VPRCKL
Trigger: CAACTTGCAGCGGGGCACTCATGTCCTTCCCATTGC...CTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp TTTCGTTCTTCATCCCTGATTTTCCGCTCAGCTCCCTTGTCACAGAAGACCTTGGTATGCTGTTTCTTTTaGTGTGATCTGGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: FRSSSLIFRSAPLSQKTLVCCFF*CDLAQG
Trigger: ACCCTGAGCCAGATCACAGCAAAAGAAACAGCATAC...CAAGGTCTTCTGTGACAAGGGAGCTGAGCGGAAAATCAGGGATGAAGAACGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR GCA 90 bp GCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGAATAAAGTTTTCGGCCTCTCTTATCAATaGCCAGCTGGTTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: ADVLKLPRDSVNSWNKVFGLSYQ*PAGCHG
Trigger: CCCATGGCAACCAGCTGGGCATTGATAAGAGAGGCC...GAAAACTTTATTCCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR GCA 90 bp ATCAAGCCCTTCAAAGATGGGGTTTTGAGCATCAGGGCATCAAAGACTTCTTCTGATGGATTCCTTCACTaGTGCTCACCTCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: IKPFKDGVLSIRASKTSSDGFLH*CSPPSR
Trigger: CCTTGAAGGAGGTGAGCAGCAGTGAAGGAATCCATC...AGAAGAAGTCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp ATAAATAACGTAGCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGGTGTGCTGCCGGGAGTaGCAGTACTTCCAATGCCTT +
Preference number: 4 (lower is better)
Translates to: INNVADVLKLPRDSVNSWVCCRE*QYFQCL
Trigger: AAGGCATTGGAAGTACTGGCACTCCCGGCAGCACAC...CCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGCTACGTTATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR GCA 90 bp ACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACACCGGGAAGAGAAATCTGTaGTTAAGCAGTTCACAGAGA +
Preference number: 4 (lower is better)
Translates to: TWLTGVTCSCQTVRSRNTGKRNL*LSSSQR
Trigger: TCTCTGTGAACTGCTTAAGCACAGATTTCTCTTCCC...GGTGTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR GCA 90 bp GCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACTGCTATGCTACAGAATaGCTGTGTTTGGAAAAACAG +
Preference number: 4 (lower is better)
Translates to: ATWLTGVTCSCQTVRSRNCYATE*LCLEKQ
Trigger: CTGTTTTTCCAAACACAGGCATTCTGTAGCATAGCA...GTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR GCA 90 bp CACCAATGCAATAGATTAAATGCTACCACCAAGCCAGATGCAGCCCCGCCTCCACAGGAAGATGAGAACTaGATTTCGAGTTGTATCACT +
Preference number: 4 (lower is better)
Translates to: HQCNRLNATTKPDAAPPPQEDEN*ISSCIT
Trigger: AGTGATACAACTCGAAATGCAGTTCTCATCTTCCTG...TGGAGGCGGGGCTGCATCTGGCTTGGTGGTAGCATTTAATCTATTGCATTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR GCA 90 bp AAACAAACTCCCATTTTGCTGTTACAGAAACGTGGCATTTCCCCCTGCACTCTTCGTGGCATTTCCCCCTaGACTCTTTATGCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: KQTPILLLQKRGISPCTLRGISP*TLYAVR
Trigger: CCTAACAGCATAAAGAGTGCAGGGGGAAATGCCACG...AAGAGTGCAGGGGGAAATGCCACGTTTCTGTAACAGCAAAATGGGAGTTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR CCA 90 bp GATGAGGGGCTGCTCTGTCACAATTGGTATGCTGTTTCTATCTCTTTCACTAGTGTAGGACCGCCGCTGTaGATAAAGTGCTTCATTCTG +
Preference number: 4 (lower is better)
Translates to: DEGLLCHNWYAVSISFTSVGPPL*IKCFIL
Trigger: CAGAATGAAGCACTTTATCCACAGCGGCGGTCCTAC...ACTAGTGAAAGAGATAGAAACAGCATACCAATTGTGACAGAGCAGCCCCTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR CCA 90 bp TTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCATCAAGCCCTTCAAATCTTTTGCTGTGATCTaGCTCAGGGTGCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: LSWGTSYLSEIASIKPFKSFAVI*LRVLHL
Trigger: GAGGTGGAGCACCCTGAGCCAGATCACAGCAAAAGA...TTTGAAGGGCTTGATGGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp ATCAAGCCCTTCAAAGATGGGGTTTTGAGCATCAGGGCATCAAAGACTTCTTCTTCTGGAGCTGTCAGATaGCCTCTCTTATCAATGCCC +
Preference number: 4 (lower is better)
Translates to: IKPFKDGVLSIRASKTSSSGAVR*PLLSMP
Trigger: GGGCATTGATAAGAGAGGCCATCTGACAGCTCCAGA...AGAAGAAGTCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp GTACTGAATTCAGGCAAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTTGTTCAGGTACGTCATaGTACTGTCTCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VLNSGKGTKSLKPSLSPFCSGTS*YCLLAS
Trigger: AGAAGCCAGGAGACAGTACCATGACGTACCTGAACA...AAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTTGCCTGAATTCAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp CACAGGCTTGTTGCTGCGGTTGTTGTAACTATAGGTATCAACTTGAATGTTAAGTGCCCCGCTGCAAGTTaGCAAAGTGCACGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: HRLVAAVVVTIGINLNVKCPAAS*QSARQE
Trigger: TTCCTGACGTGCACTTTGCCAACTTGCAGCGGGGCA...CTTAACATTCAAGTTGATACCTATAGTTACAACAACCGCAGCAACAAGCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
3UTR CAA 72 bp GAGATAGCTTCCATCAAGCCCTTCAAAGATGGGGTTTaGAGCATCAGGGCATCAAAGACTTCTTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: EIASIKPFKDGV*SIRASKTSSDS
Trigger: GGAGTCAGAAGAAGTCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTGATGGAAGCTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR TCA 90 bp AATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCCTTTGGTCGCTGCAGTaGGAGGGTTTTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: NIFPILSWGTSYLSEIASLWSLQ*EGFPGR
Trigger: CCTTCCTGGAAAACCCTCTCACTGCAGCGACCAAAG...GGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR TCA 90 bp TTTCGTTCTTCATCCCTGATTTTCCGCTCAGCTCCCTTGTCACAGAAGACCTTGATCAAAGACTTCTTCTaGCTCCTTTCGAACGTAGAG +
Preference number: 4 (lower is better)
Translates to: FRSSSLIFRSAPLSQKTLIKDFF*LLSNVE
Trigger: CTCTACGTTCGAAAGGAGTCAGAAGAAGTCTTTGAT...CAAGGTCTTCTGTGACAAGGGAGCTGAGCGGAAAATCAGGGATGAAGAACGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR GCA 90 bp AATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCCTTTGTTTAGCGGTGTaGTGCCGGGAGTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: NIFPILSWGTSYLSEIASLCLAV*CRECQY
Trigger: GTACTGGCACTCCCGGCAGCACACCGCTAAACAAAG...GGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp AAATCCTTAAAGCCAAGCCTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCAGAGATGAAAACCTTTaGTTCATCGTTGATGTCCCA +
Preference number: 4 (lower is better)
Translates to: KSLKPSLSPFLTSASEQARDENL*FIVDVP
Trigger: TGGGACATCAACGATGAAGCAAAGGTTTTCATCTCT...GGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGCTTGGCTTTAAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR GCA 90 bp ATCAAGCCCTTCAAAGATGGGGTTTTGAGCATCAGGGCATCAAAGACTTCTTCTGGTGCACAGGCTTGTTaGTGCGGTTGTTGTAACTAT +
Preference number: 4 (lower is better)
Translates to: IKPFKDGVLSIRASKTSSGAQAC*CGCCNY
Trigger: ATAGTTACAACAACCGCAGCAACAAGCCTGTGCACC...AGAAGAAGTCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp ATCAAGCCCTTCAAAGATGGGGTTTTGAGCATCAGGGCATCAAAGACTTCTTCTTGCAAGTTGGCAAAGTaGACGTCAGGAATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: IKPFKDGVLSIRASKTSSCKLAK*TSGMKR
Trigger: CCTCTTCATTCCTGACGTGCACTTTGCCAACTTGCA...AGAAGAAGTCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp TCCCATTTTGCTGTTACAGAAACGTGGCATTTCCCCCTGCACTCTTTATGCTGTCTGAATGTTACCTTTTaGTGTGATCTGGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SHFAVTETWHFPLHSLCCLNVTF*CDLAQG
Trigger: ACCCTGAGCCAGATCACAGCAAAAGGTAACATTCAG...ACAGCATAAAGAGTGCAGGGGGAAATGCCACGTTTCTGTAACAGCAAAATGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR CCA 90 bp AAACTCCCATTTTGCTGTTACAGAAACGTGGCATTTCCCCCTGCACTCTTTATGCTGAAGAACCAACACTaGCCGTTTGTTGTCGTACTC +
Preference number: 4 (lower is better)
Translates to: KLPFCCYRNVAFPPALFMLKNQH*PFVVVL
Trigger: GAGTACGACAACAAACGGCCAGTGTTGGTTCTTCAG...CATAAAGAGTGCAGGGGGAAATGCCACGTTTCTGTAACAGCAAAATGGGAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR CCA 90 bp GCTGCGGTTGTTGTAACTATAGGTATCAACTTGAATGTTAAGAGGCAACCCCTTAGTGACTGTCGTATCTaGAGCTGTCAGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: AAVVVTIGINLNVKRQPLSDCRI*SCQMAS
Trigger: AGAGGCCATCTGACAGCTCCAGATACGACAGTCACT...AAGGGGTTGCCTCTTAACATTCAAGTTGATACCTATAGTTACAACAACCGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CCA 90 bp TCGTTGATGTCCCATGTGAAGGAAATGGCGTTATACGCAATCTCCTCGATGTTATGTTCAGGTACGTCATaGTACTGTCTCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLMSHVKEMALYAISSMLCSGTS*YCLLAS
Trigger: AGAAGCCAGGAGACAGTACCATGACGTACCTGAACA...TAACATCGAGGAGATTGCGTATAACGCCATTTCCTTCACATGGGACATCAACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CCA 90 bp AGACTTCTTCTGACTCCTTTCGAACGTAGAGCAGCACTCTCTTTGGTTCTTCTATGTTCAGGTACGTCATaGTACTGTCTCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RLLLTPFERRAALSLVLLCSGTS*YCLLAS
Trigger: AGAAGCCAGGAGACAGTACCATGACGTACCTGAACA...TAGAAGAACCAAAGAGAGTGCTGCTCTACGTTCGAAAGGAGTCAGAAGAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp GGCTTCTTCAATCTGCAGCTGGAAGGTGTCCTCATTGGAGTAATGCTTCACAATGTGAGAGGGAAGCAGTaGCACTTTAACATCAGAAAC +
Preference number: 4 (lower is better)
Translates to: GFFNLQLEGVLIGVMLHNVRGKQ*HFNIRN
Trigger: GTTTCTGATGTTAAAGTGCCACTGCTTCCCTCTCAC...ATTGTGAAGCATTACTCCAATGAGGACACCTTCCAGCTGCAGATTGAAGAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp AAAAGGTTTTTAGCGGGTTCCACTAAGCACAGTATTCTATCTGCTTGGTATACATGCCCCGCTGCAAGTTaGCAAAGTGCACGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: KRFLAGSTKHSILSAWYTCPAAS*QSARQE
Trigger: TTCCTGACGTGCACTTTGCCAACTTGCAGCGGGGCA...TGTATACCAAGCAGATAGAATACTGTGCTTAGTGGAACCCGCTAAAAACCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CCA 90 bp TTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCATCAAGCCCTTCAAAATTCTTCAGAGGCAATaGGAAGGACATGAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LSWGTSYLSEIASIKPFKILQRQ*EGHECP
Trigger: GGGGCACTCATGTCCTTCCCATTGCCTCTGAAGAAT...TTTGAAGGGCTTGATGGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp GATGGGGTTTTGAGCATCAGGGCATCAAAGACTTCTTCTGACTCCTTTCGAACGGGAAGGTGTCCTCATTaGAGTAATGCTTCACAATGT +
Preference number: 4 (lower is better)
Translates to: DGVLSIRASKTSSDSFRTGRCPH*SNASQC
Trigger: ACATTGTGAAGCATTACTCCAATGAGGACACCTTCC...CGTTCGAAAGGAGTCAGAAGAAGTCTTTGATGCCCTGATGCTCAAAACCCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR TCA 90 bp AACGTAGCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGAATAAATTCCTTGAAGGTCTCTaGGAAGGTCGAGTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: NVADVLKLPRDSVNSWNKFLEGL*EGRVWS
Trigger: ACTCCAGACTCGACCTTCTCAGAGACCTTCAAGGAA...TTTATTCCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGCTACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR TCA 90 bp AAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTCTGACTTCTGCTAGCTTCCAATGCCTTAACTaGTCTTCTCTGCTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: KGTKSLKPSLSPFLTSASFQCLN*SSLLLS
Trigger: AGACAAAAGCAGAGAAGATCAGTTAAGGCATTGGAA...GCTAGCAGAAGTCAGAAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR TCA 90 bp ACTGAATTCAGGCAAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTCTAGCAGTTCACAGAGATaGAAACCTTTGCTTCATCGT +
Preference number: 4 (lower is better)
Translates to: TEFRQGHEILKAKPIAFSSSSQR*KPLLHR
Trigger: ACGATGAAGCAAAGGTTTTCATCTCTGTGAACTGCT...AGAAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTTGCCTGAATTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR TCA 90 bp CCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCATCAAGCCCAGCAGTTCACAGAGATaGAAACCTTTGCTTCATCGT +
Preference number: 4 (lower is better)
Translates to: PILSWGTSYLSEIASIKPSSSQR*KPLLHR
Trigger: ACGATGAAGCAAAGGTTTTCATCTCTGTGAACTGCT...GGGCTTGATGGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAAGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp AAAGTCTTTAAGGTAGCTCTTACTGCATATCTTCACTATATGTACACAGACACCTGGGAAGGACATGAGTaGCCCGCTGCAAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: KVFKVALTAYLHYMYTDTWEGHE*PAASWQ
Trigger: TTGCCAACTTGCAGCGGGGCACTCATGTCCTTCCCA...GGTGTCTGTGTACATATAGTGAAGATATGCAGTAAGAGCTACCTTAAAGACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324907.14
3UTR CAA 72 bp CTTGTTGCTGCGGTTGTTGTAACTATAGGTATCAACTaGAATGTTAAGAGGCAACCCCTTCACTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LVAAVVVTIGIN*NVKRQPLHSLL
Trigger: CAGAAGGGAGTGAAGGGGTTGCCTCTTAACATTCAAGTTGATACCTATAGTTACAACAACCGCAGCAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR TCA 90 bp AAAAGGTTTTTAGCGGGTTCCACTAAGCACAGTATTCTATCTGCTTGGTATACATTCGTTCTTCATCCCTaGTTTTCCGCTCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: KRFLAGSTKHSILSAWYTFVLHP*FSAQLP
Trigger: AGGGAGCTGAGCGGAAAATCAGGGATGAAGAACGAA...TGTATACCAAGCAGATAGAATACTGTGCTTAGTGGAACCCGCTAAAAACCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR TCA 90 bp AGACTTCTTCTGACTCCTTTCGAACGTAGAGCAGCACTCTCTTTGGTTCTTCTAATCAAAGACTTCTTCTaGCTCCTTTCGAACGTAGAG +
Preference number: 4 (lower is better)
Translates to: RLLLTPFERRAALSLVLLIKDFF*LLSNVE
Trigger: CTCTACGTTCGAAAGGAGTCAGAAGAAGTCTTTGAT...TAGAAGAACCAAAGAGAGTGCTGCTCTACGTTCGAAAGGAGTCAGAAGAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp TTAAACAAACTCCCATTTTGCTGTTACAGAAACGTGGCATTTCCCCCTGCACTCCCGCTGTGGATAAAGTaGTTCATTCTGAAGAACCAA +
Preference number: 4 (lower is better)
Translates to: LNKLPFCCYRNVAFPPALPLWIK*FILKNQ
Trigger: TTGGTTCTTCAGAATGAAGCACTTTATCCACAGCGG...GAGTGCAGGGGGAAATGCCACGTTTCTGTAACAGCAAAATGGGAGTTTGTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR GCA 90 bp CCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCATCAAGCCCAGAGATGAAAACCTTTaGTTCATCGTTGATGTCCCA +
Preference number: 4 (lower is better)
Translates to: PILSWGTSYLSEIASIKPRDENL*FIVDVP
Trigger: TGGGACATCAACGATGAAGCAAAGGTTTTCATCTCT...GGGCTTGATGGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAAGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp AGACTTCTTCTGACTCCTTTCGAACGTAGAGCAGCACTCTCTTTGGTTCTTCTAGGGAAGAGAAATCTGTaGTTAAGCAGTTCACAGAGA +
Preference number: 4 (lower is better)
Translates to: RLLLTPFERRAALSLVLLGKRNL*LSSSQR
Trigger: TCTCTGTGAACTGCTTAAGCACAGATTTCTCTTCCC...TAGAAGAACCAAAGAGAGTGCTGCTCTACGTTCGAAAGGAGTCAGAAGAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp ATCAAGCCCTTCAAAGATGGGGTTTTGAGCATCAGGGCATCAAAGACTTCTTCTGGGAAGAGAAATCTGTaGTTAAGCAGTTCACAGAGA +
Preference number: 4 (lower is better)
Translates to: IKPFKDGVLSIRASKTSSGKRNL*LSSSQR
Trigger: TCTCTGTGAACTGCTTAAGCACAGATTTCTCTTCCC...AGAAGAAGTCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp AACGTAGCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGAATAAATGCAAGTTGGCAAAGTaGACGTCAGGAATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: NVADVLKLPRDSVNSWNKCKLAK*TSGMKR
Trigger: CCTCTTCATTCCTGACGTGCACTTTGCCAACTTGCA...TTTATTCCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGCTACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR GCA 90 bp AAAGTCTTTAAGGTAGCTCTTACTGCATATCTTCACTATATGTACACAGACACCCCGGCTTCTTCAATCTaGAGCTGGAAGGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: KVFKVALTAYLHYMYTDTPASSI*SWKVSS
Trigger: TGAGGACACCTTCCAGCTGCAGATTGAAGAAGCCGG...GGTGTCTGTGTACATATAGTGAAGATATGCAGTAAGAGCTACCTTAAAGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CCA 90 bp AACGTAGCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGAATAAACTGAAGAACCAACACTaGCCGTTTGTTGTCGTACTC +
Preference number: 4 (lower is better)
Translates to: NVADVLKLPRDSVNSWNKLKNQH*PFVVVL
Trigger: GAGTACGACAACAAACGGCCAGTGTTGGTTCTTCAG...TTTATTCCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGCTACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CCA 90 bp AAAGTCTTTAAGGTAGCTCTTACTGCATATCTTCACTATATGTACACAGACACCTCTTTTGCTGTGATCTaGCTCAGGGTGCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: KVFKVALTAYLHYMYTDTSFAVI*LRVLHL
Trigger: GAGGTGGAGCACCCTGAGCCAGATCACAGCAAAAGA...GGTGTCTGTGTACATATAGTGAAGATATGCAGTAAGAGCTACCTTAAAGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CCA 90 bp GGCTTCTTCAATCTGCAGCTGGAAGGTGTCCTCATTGGAGTAATGCTTCACAATCTGCTCTGTCACAATTaGTATGCTGTTTCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GFFNLQLEGVLIGVMLHNLLCHN*YAVSFA
Trigger: AGCAAAAGAAACAGCATACCAATTGTGACAGAGCAG...ATTGTGAAGCATTACTCCAATGAGGACACCTTCCAGCTGCAGATTGAAGAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp AAAAGGTTTTTAGCGGGTTCCACTAAGCACAGTATTCTATCTGCTTGGTATACATCTGGAGCTGTCAGATaGCCTCTCTTATCAATGCCC +
Preference number: 4 (lower is better)
Translates to: KRFLAGSTKHSILSAWYTSGAVR*PLLSMP
Trigger: GGGCATTGATAAGAGAGGCCATCTGACAGCTCCAGA...TGTATACCAAGCAGATAGAATACTGTGCTTAGTGGAACCCGCTAAAAACCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CCA 90 bp AACGTAGCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGAATAAAGCACCAGAGCTGAACTaGTCAGTATTGAGATTCCGA +
Preference number: 4 (lower is better)
Translates to: NVADVLKLPRDSVNSWNKAPELN*SVLRFR
Trigger: TCGGAATCTCAATACTGACCAGTTCAGCTCTGGTGC...TTTATTCCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGCTACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp ATAAATAACGTAGCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGTGTTCAGGTACGTCATaGTACTGTCTCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: INNVADVLKLPRDSVNSWCSGTS*YCLLAS
Trigger: AGAAGCCAGGAGACAGTACCATGACGTACCTGAACA...CCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGCTACGTTATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp GGCTTCTTCAATCTGCAGCTGGAAGGTGTCCTCATTGGAGTAATGCTTCACAATTTCCCAATCTTGTCATaGGGAACATCGTATTTGTCT +
Preference number: 4 (lower is better)
Translates to: GFFNLQLEGVLIGVMLHNFPILS*GTSYLS
Trigger: AGACAAATACGATGTTCCCCATGACAAGATTGGGAA...ATTGTGAAGCATTACTCCAATGAGGACACCTTCCAGCTGCAGATTGAAGAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp TCGTATTTGTCTGAGATAGCTTCCATCAAGCCCTTCAAAGATGGGGTTTTGAGCGGAAGGTGTCCTCATTaGAGTAATGCTTCACAATGT +
Preference number: 4 (lower is better)
Translates to: SYLSEIASIKPFKDGVLSGRCPH*SNASQC
Trigger: ACATTGTGAAGCATTACTCCAATGAGGACACCTTCC...GCTCAAAACCCCATCTTTGAAGGGCTTGATGGAAGCTATCTCAGACAAATACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp GCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGAATAAAGTTTTCTCTTCAATCTGCAGCTaGAAGGTGTCCTCATTGGAG +
Preference number: 4 (lower is better)
Translates to: ADVLKLPRDSVNSWNKVFSSICS*KVSSLE
Trigger: CTCCAATGAGGACACCTTCCAGCTGCAGATTGAAGA...GAAAACTTTATTCCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp CACAGGCTTGTTGCTGCGGTTGTTGTAACTATAGGTATCAACTTGAATGTTAAGCTGAAGAACCAACACTaGCCGTTTGCAGTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: HRLVAAVVVTIGINLNVKLKNQH*PFAVAF
Trigger: AAAGGCAACTGCAAACGGCCAGTGTTGGTTCTTCAG...CTTAACATTCAAGTTGATACCTATAGTTACAACAACCGCAGCAACAAGCCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR TCA 90 bp CACAGGCTTGTTGCTGCGGTTGTTGTAACTATAGGTATCAACTTGAATGTTAAGCACTTCGAACTTTGCTaGTGGGATGATGGATTCCTT +
Preference number: 4 (lower is better)
Translates to: HRLVAAVVVTIGINLNVKHFELC*WDDGFL
Trigger: AAGGAATCCATCATCCCATCAGCAAAGTTCGAAGTG...CTTAACATTCAAGTTGATACCTATAGTTACAACAACCGCAGCAACAAGCCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR TCA 90 bp GGTATCAACTTGAATGTTAAGAGGCAACCCCTTCACTCCCTTCTGGGAAGAGAAGATCTCTCAGACTTCTaGAATATGTTTCAGGCAATA +
Preference number: 4 (lower is better)
Translates to: GINLNVKRQPLHSLLGREDLSDF*NMFQAI
Trigger: TATTGCCTGAAACATATTTCAGAAGTCTGAGAGATC...TTCTCTTCCCAGAAGGGAGTGAAGGGGTTGCCTCTTAACATTCAAGTTGATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR GCA 90 bp CACTTCTTGAATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGGCACAGGCTTGTTGCTaGGGTTGTTGTAACTATAGG +
Preference number: 4 (lower is better)
Translates to: HFLNIFPILSWGTSYLSEAQACC*GCCNYR
Trigger: CCTATAGTTACAACAACCGCAGCAACAAGCCTGTGC...CTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp TTTTGCTGTTACAGAAACGTGGCATTTCCCCCTGCACTCTTTATGCTGTTAGGCCTGTCACAATTGGTATaGTGTTTCTATCTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: FCCYRNVAFPPALFMLLGLSQLV*CFYLFH
Trigger: GTGAAAGAGATAGAAACAGCATACCAATTGTGACAG...GCCTAACAGCATAAAGAGTGCAGGGGGAAATGCCACGTTTCTGTAACAGCAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR CCA 90 bp AGACTTCTTCTGACTCCTTTCGAACGTAGAGCAGCACTCTCTTTGGTTCTTCTACTGCTCTGTCACAATTaGTATGCTGTTTCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: RLLLTPFERRAALSLVLLLLCHN*YAVSFA
Trigger: AGCAAAAGAAACAGCATACCAATTGTGACAGAGCAG...TAGAAGAACCAAAGAGAGTGCTGCTCTACGTTCGAAAGGAGTCAGAAGAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp AATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCGCACCAGAGCTGAACTaGTCAGTATTGAGATTCCGA +
Preference number: 4 (lower is better)
Translates to: NIFPILSWGTSYLSEIASAPELN*SVLRFR
Trigger: TCGGAATCTCAATACTGACCAGTTCAGCTCTGGTGC...GGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp ATAAATAACGTAGCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGGTGAGAGGGAAGCAGTaGCACTTTAACATCAGAAAC +
Preference number: 4 (lower is better)
Translates to: INNVADVLKLPRDSVNSWVRGKQ*HFNIRN
Trigger: GTTTCTGATGTTAAAGTGCCACTGCTTCCCTCTCAC...CCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGCTACGTTATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CCA 90 bp TTCTTGAATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATAGAGCAGCACTCTCTTTaGTTCTTCTATCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: FLNIFPILSWGTSYLSEIEQHSL*FFYPGQ
Trigger: CTGGCCCGGATAGAAGAACCAAAGAGAGTGCTGCTC...TATCTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp AATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCTCTTCAATCTGCAGCTaGAAGGTGTCCTCATTGGAG +
Preference number: 4 (lower is better)
Translates to: NIFPILSWGTSYLSEIASSSICS*KVSSLE
Trigger: CTCCAATGAGGACACCTTCCAGCTGCAGATTGAAGA...GGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp CCATTTTGCTGTTACAGAAACGTGGCATTTCCCCCTGCACTCTTTATGCTGTTACTGCTCTGTCACAATTaGTATGCTGTTTCTATCTCT +
Preference number: 4 (lower is better)
Translates to: PFCCYRNVAFPPALFMLLLLCHN*YAVSIS
Trigger: AGAGATAGAAACAGCATACCAATTGTGACAGAGCAG...TAACAGCATAAAGAGTGCAGGGGGAAATGCCACGTTTCTGTAACAGCAAAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR CCA 90 bp TTCTTGAATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATATCAGAAACTGGGAGCTaGGGTCAGGACACTTGCCTT +
Preference number: 4 (lower is better)
Translates to: FLNIFPILSWGTSYLSEISETGS*GQDTCL
Trigger: AAGGCAAGTGTCCTGACCCCAGCTCCCAGTTTCTGA...TATCTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472167.5
CDS-3UTR TCA 90 bp TTCTTGAATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATATTGCTATGGAGACAGTaGCTGTCGTATCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: FLNIFPILSWGTSYLSEILLWRQ*LSYLEL
Trigger: CAGCTCCAGATACGACAGTCACTGTCTCCATAGCAA...TATCTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR TCA 90 bp AATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCAAAAACATAGTCCTCTaGATTCATGCCAGGCATCCG +
Preference number: 4 (lower is better)
Translates to: NIFPILSWGTSYLSEIASKNIVL*IHARHP
Trigger: CGGATGCCTGGCATGAATTCAGAGGACTATGTTTTT...GGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472167.5
CDS-3UTR TCA 90 bp AATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCATGAAGAGGACAGGCTaGGTATCGAGATCAATGAAG +
Preference number: 4 (lower is better)
Translates to: NIFPILSWGTSYLSEIASMKRTG*VSRSMK
Trigger: CTTCATTGATCTCGATACTCAGCCTGTCCTCTTCAT...GGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR TCA 90 bp GCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGAATAAAGTTTTCATCAAAGACTTCTTCTaGCTCCTTTCGAACGTAGAG +
Preference number: 4 (lower is better)
Translates to: ADVLKLPRDSVNSWNKVFIKDFF*LLSNVE
Trigger: CTCTACGTTCGAAAGGAGTCAGAAGAAGTCTTTGAT...GAAAACTTTATTCCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR TCA 90 bp TTCTTGAATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATACAAAGTTGTTCCTCCTaGACGCCTTCCTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: FLNIFPILSWGTSYLSEIQSCSS*TPSLKV
Trigger: GACCTTCAAGGAAGGCGTTCAGGAGGAACAACTTTG...TATCTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR GCA 90 bp GCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGAATAAAGTTTTCCCGCTGTGGATAAAGTaGTTCATTCTGAAGAACCAA +
Preference number: 4 (lower is better)
Translates to: ADVLKLPRDSVNSWNKVFPLWIK*FILKNQ
Trigger: TTGGTTCTTCAGAATGAAGCACTTTATCCACAGCGG...GAAAACTTTATTCCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR GCA 90 bp TTCTTGAATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATAGTGGGTAGGCATCGTTaGTATGGAGACAGTGACTGT +
Preference number: 4 (lower is better)
Translates to: FLNIFPILSWGTSYLSEIVGRHR*YGDSDC
Trigger: ACAGTCACTGTCTCCATAGCAACGATGCCTACCCAC...TATCTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CCA 90 bp TTCTTGAATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATATTATCAATGCCCAGCTaGTTGCCATGGGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: FLNIFPILSWGTSYLSEILSMPS*LPWGRT
Trigger: TGTCCTTCCCCATGGCAACCAGCTGGGCATTGATAA...TATCTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR TCA 90 bp AACGTAGCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGAATAAATTCCAATGCCTTAACTaGTCTTCTCTGCTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: NVADVLKLPRDSVNSWNKFQCLN*SSLLLS
Trigger: AGACAAAAGCAGAGAAGATCAGTTAAGGCATTGGAA...TTTATTCCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGCTACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR TCA 90 bp AAAGTCTTTAAGGTAGCTCTTACTGCATATCTTCACTATATGTACACAGACACCTCAAAGATGGGGTTTTaGGCATCAGGGCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: KVFKVALTAYLHYMYTDTSKMGF*ASGHQR
Trigger: TCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGA...GGTGTCTGTGTACATATAGTGAAGATATGCAGTAAGAGCTACCTTAAAGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR TCA 90 bp CACTTCTTGAATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGTTCCAATGCCTTAACTaGTCTTCTCTGCTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: HFLNIFPILSWGTSYLSEFQCLN*SSLLLS
Trigger: AGACAAAAGCAGAGAAGATCAGTTAAGGCATTGGAA...CTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR GCA 90 bp AAAAGGTTTTTAGCGGGTTCCACTAAGCACAGTATTCTATCTGCTTGGTATACAAGAGATGAAAACCTTTaGTTCATCGTTGATGTCCCA +
Preference number: 4 (lower is better)
Translates to: KRFLAGSTKHSILSAWYTRDENL*FIVDVP
Trigger: TGGGACATCAACGATGAAGCAAAGGTTTTCATCTCT...TGTATACCAAGCAGATAGAATACTGTGCTTAGTGGAACCCGCTAAAAACCTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS GCA 90 bp GGCCGTTTGTTGTCGTACTCCTGTGTCATCGCGCCCGCTCGCCGCTaGCGGGCCGCAGAACTGGACTTTCGGGTTGGGACAGTACACCCG +
Preference number: 5 (lower is better)
Translates to: GRLLSYSCVIAPARR*RAAELDFRVGTVHP
Trigger: CGGGTGTACTGTCCCAACCCGAAAGTCCAGTTCTGCGGCCCGGCAGCGGCGAGCGGGCGCGATGACACAGGAGTACGACAACAAACGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000439493.5
ENST00000497403.5
CDS GCA 90 bp CTGCATATTTTGTCGTACTCCTGTGTCATCGCGCCCGCTCGCCGCTaGCGGGCCGCAGAACTGGACTTTCGGGTTGGGACAGTACACCCG +
Preference number: 5 (lower is better)
Translates to: LHILSYSCVIAPARR*RAAELDFRVGTVHP
Trigger: CGGGTGTACTGTCCCAACCCGAAAGTCCAGTTCTGCGGCCCGGCAGCGGCGAGCGGGCGCGATGACACAGGAGTACGACAAAATATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CAA 90 bp TGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCTTTAGATCTCCGTCAGGGGTGCCCCGCTGCAAGTaGGCAAAGTGCACGTCAGGA +
Preference number: 5 (lower is better)
Translates to: CTELLGSCGPQAFRSPSGVPRCK*AKCTSG
Trigger: TCCTGACGTGCACTTTGCCAACTTGCAGCGGGGCAC...CCCTGACGGAGATCTAAAGGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472167.5
CDS-3UTR CAA 90 bp CCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCACAAGGCAGGTGCCCCGCTGCAAGTaGGCAAAGTGCACGTCAGGA +
Preference number: 5 (lower is better)
Translates to: PFLTSASEQAHDTVGTRQVPRCK*AKCTSG
Trigger: TCCTGACGTGCACTTTGCCAACTTGCAGCGGGGCAC...CTGCCTTGTGCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CAA 90 bp TTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTGTGCCCCGCTGCAAGTaGGCAAAGTGCACGTCAGGA +
Preference number: 5 (lower is better)
Translates to: FPRHRPVLATWLTGVTCSVPRCK*AKCTSG
Trigger: TCCTGACGTGCACTTTGCCAACTTGCAGCGGGGCAC...ACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CAA 90 bp TGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCTTTAGATCTCCGTCAGGGAGAGCAGCACTCTCTTaGGTTCTTCTATCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: CTELLGSCGPQAFRSPSGRAALS*VLLSGP
Trigger: TGGCCCGGATAGAAGAACCAAAGAGAGTGCTGCTCT...CCCTGACGGAGATCTAAAGGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472167.5
CDS CCA 90 bp ATCGAAAACCACCACCCGCTCAGTGGGCTCAGGATGATACACTGCTaGGGGGATTCCCACAGCGAAGCCATGTGGCTGGGTTTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: IENHHPLSGLRMIHC*GDSHSEAMWLGFCL
Trigger: AAGACAGAAACCCAGCCACATGGCTTCGCTGTGGGAATCCCCCCAGCAGTGTATCATCCTGAGCCCACTGAGCGGGTGGTGGTTTTCGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000464418.5
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS-3UTR CAA 90 bp ACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACACCGGCGGCCCCGACGGGTaGGGTTTGCTTTTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: TWLTGVTCSCQTVRSRNTGGPDG*GLLFSL
Trigger: GAGCGAGAAAAGCAAACCCAACCCGTCGGGGCCGCC...GGTGTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CAA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGAAACTGGACTTTCGGGTaGGGACAGTACACCCGATCC +
Preference number: 5 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRNWTFG*GQYTRS
Trigger: GGATCGGGTGTACTGTCCCAACCCGAAAGTCCAGTT...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CAA 90 bp ACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGATGCTCATCATCGCTTaGGTCGCTGCAGTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: TVRSRNTCTELLGSCGPQMLIIA*VAAVRG
Trigger: CCCTCTCACTGCAGCGACCAAAGCGATGATGAGCAT...CTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR CAA 90 bp ACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGTTCGCCTTTGAGCATTaGGGGCTTGAGCACCAGAGC +
Preference number: 5 (lower is better)
Translates to: TCAGDMADWGYLQLPNRKFAFEH*GLEHQS
Trigger: GCTCTGGTGCTCAAGCCCCAAATGCTCAAAGGCGAA...CTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CAA 90 bp AACCCATTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCGTCTGGAGTTCGCCTTaGAGCATTTGGGGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: NPFPRHRPVLATWLTGVTVWSSP*SIWGLS
Trigger: GCTCAAGCCCCAAATGCTCAAAGGCGAACTCCAGAC...GGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAATGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CAA 90 bp ACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGGTCTGGAGTTCGCCTTaGAGCATTTGGGGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: TCAGDMADWGYLQLPNRKVWSSP*SIWGLS
Trigger: GCTCAAGCCCCAAATGCTCAAAGGCGAACTCCAGAC...CTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CAA 90 bp AGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAGTCTGGAGTTCGCCTTaGAGCATTTGGGGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: RPVLATWLTGVTCSCQTVVWSSP*SIWGLS
Trigger: GCTCAAGCCCCAAATGCTCAAAGGCGAACTCCAGAC...TACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CAA 90 bp GTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCTTCCGCTCAGCTCCCTaGTCACAGAAGACCTTGATC +
Preference number: 5 (lower is better)
Translates to: VRSRNTCTELLGSCGPQAFRSAP*SQKTLI
Trigger: GATCAAGGTCTTCTGTGACAAGGGAGCTGAGCGGAA...GGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS CCA 90 bp AGCTACATGGCTTCTGGCCCTAGTGTCCTGTGGAAAGCCACCACGTaGGCACATGTCCCATTACTGCATGGGAGCAATGGTGAGAGCACT +
Preference number: 5 (lower is better)
Translates to: SYMASGPSVLWKATT*AHVPLLHGSNGEST
Trigger: AGTGCTCTCACCATTGCTCCCATGCAGTAATGGGACATGTGCCCACGTGGTGGCTTTCCACAGGACACTAGGGCCAGAAGCCATGTAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS CCA 90 bp ATTCTCAGGTTAGCCAGCTACATGGCTTCTGGCCCTAGTGTCCTGTaGAAAGCCACCACGTGGGCACATGTCCCATTACTGCATGGGAGC +
Preference number: 5 (lower is better)
Translates to: ILRLASYMASGPSVL*KATTWAHVPLLHGS
Trigger: GCTCCCATGCAGTAATGGGACATGTGCCCACGTGGTGGCTTTCCACAGGACACTAGGGCCAGAAGCCATGTAGCTGGCTAACCTGAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS-3UTR CAA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGAGCTCCACCTCTGGCTTaGCTGTTGATGACCTTCTCT +
Preference number: 5 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRAPPLA*LLMTFS
Trigger: AGAGAAGGTCATCAACAGCAAAGCCAGAGGTGGAGC...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR CAA 90 bp AACCCATTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCAGAGCAGCACTCTCTTaGGTTCTTCTATCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: NPFPRHRPVLATWLTGVTRAALS*VLLSGP
Trigger: TGGCCCGGATAGAAGAACCAAAGAGAGTGCTGCTCT...GGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAATGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CAA 90 bp TTTTGCTGTTACAGAAACGTGGCATTTCCCCCTGCACTCTTTATGCTGTTAGGCGGCGGCCCCGACGGGTaGGGTTTGCTTTTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: FCCYRNVAFPPALFMLLGGGPDG*GLLFSL
Trigger: GAGCGAGAAAAGCAAACCCAACCCGTCGGGGCCGCC...GCCTAACAGCATAAAGAGTGCAGGGGGAAATGCCACGTTTCTGTAACAGCAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR CAA 90 bp CCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCATCAAGCCCGGCGGCCCCGACGGGTaGGGTTTGCTTTTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: PILSWGTSYLSEIASIKPGGPDG*GLLFSL
Trigger: GAGCGAGAAAAGCAAACCCAACCCGTCGGGGCCGCC...GGGCTTGATGGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAAGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CAA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGAAACACTGGCCGTTTGTaGTCGTACTCCTGTGTCATC +
Preference number: 5 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRNTGRL*SYSCVI
Trigger: GATGACACAGGAGTACGACAACAAACGGCCAGTGTT...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR CAA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCGCTCCACCTCTGGCTTaGCTGTTGATGACCTTCTCT +
Preference number: 5 (lower is better)
Translates to: CAGDMADWGYLQLPNRKIAPPLA*LLMTFS
Trigger: AGAGAAGGTCATCAACAGCAAAGCCAGAGGTGGAGC...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR CAA 90 bp CTCTTCAGGTGCGCTCCCGCTAACGTGAGGCAGTGGAGTTGTACTGAATTCAGGTTGAGCATTTGGGGCTaGAGCACCAGAGCTGAACTG +
Preference number: 5 (lower is better)
Translates to: LFRCAPANVRQWSCTEFRLSIWG*STRAEL
Trigger: CAGTTCAGCTCTGGTGCTCAAGCCCCAAATGCTCAA...CCTGAATTCAGTACAACTCCACTGCCTCACGTTAGCGGGAGCGCACCTGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CAA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCAGAGCAGCACTCTCTTaGGTTCTTCTATCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: CAGDMADWGYLQLPNRKIRAALS*VLLSGP
Trigger: TGGCCCGGATAGAAGAACCAAAGAGAGTGCTGCTCT...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CAA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATTTTCAAGACAGAGCTaGGCCTCCCAAAGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRFSRQS*ASQSAG
Trigger: TCCAGCACTTTGGGAGGCCAAGCTCTGTCTTGAAAA...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480736.1
CDS-3UTR CAA 90 bp TATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTGCCGTATTGAGCATTTGGGGCTaGAGCACCAGAGCTGAACTG +
Preference number: 5 (lower is better)
Translates to: YPGQLGRRRDSKVIFCAVLSIWG*STRAEL
Trigger: CAGTTCAGCTCTGGTGCTCAAGCCCCAAATGCTCAA...TACGGCACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CAA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATATGTCAATGCATCTTaGTTTAGCGGTGTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRYVNAS*FSGVLP
Trigger: CGGCAGCACACCGCTAAACAAAGATGCATTGACATA...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CAA 90 bp GTAGAAGGAGGGACAGCAAAGTCATCTTCTGTGCCGTACGGCCCCCTTTTCAAGAGAGCAGCACTCTCTTaGGTTCTTCTATCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: VEGGTAKSSSVPYGPLFKRAALS*VLLSGP
Trigger: TGGCCCGGATAGAAGAACCAAAGAGAGTGCTGCTCT...CTTGAAAAGGGGGCCGTACGGCACAGAAGATGACTTTGCTGTCCCTCCTTCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS GCA 90 bp CTCAAATGGCTGGACATAAGGCGCCCAGACCTCACCACCCACCTTTaGTTCATCGTTGATGTCCCATGTGAAGGAAATGGCGTTATACGC +
Preference number: 5 (lower is better)
Translates to: LKWLDIRRPDLTTHL*FIVDVPCEGNGVIR
Trigger: GCGTATAACGCCATTTCCTTCACATGGGACATCAACGATGAAGCAAAGGTGGGTGGTGAGGTCTGGGCGCCTTATGTCCAGCCATTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS CCA 90 bp ATCGTTGCTATGGAGACAGTGACTGTCGTATCTGGAGCTGTCAGATaGCCTCTCTTATCAATGCCCAGCTGGTTGCCATGGGGAAGGACA +
Preference number: 5 (lower is better)
Translates to: IVAMETVTVVSGAVR*PLLSMPSWLPWGRT
Trigger: TGTCCTTCCCCATGGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCCAGATACGACAGTCACTGTCTCCATAGCAACGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324907.14
ENST00000464418.5
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS-3UTR CAA 90 bp AACCCATTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCGCTGCTCTGTCACAATaGGTATGCTGTTTCTTTTGC +
Preference number: 5 (lower is better)
Translates to: NPFPRHRPVLATWLTGVTAALSQ*VCCFFC
Trigger: GCAAAAGAAACAGCATACCAATTGTGACAGAGCAGC...GGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAATGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR CAA 90 bp TTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTCTGAACTGGTCAGTATaGAGATTCCGATCGAAAACC +
Preference number: 5 (lower is better)
Translates to: FPRHRPVLATWLTGVTCSLNWSV*RFRSKT
Trigger: GGTTTTCGATCGGAATCTCAATACTGACCAGTTCAG...ACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CAA 90 bp CGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAACTGAACTGGTCAGTATaGAGATTCCGATCGAAAACC +
Preference number: 5 (lower is better)
Translates to: RHRPVLATWLTGVTCSCQLNWSV*RFRSKT
Trigger: GGTTTTCGATCGGAATCTCAATACTGACCAGTTCAG...TTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CAA 90 bp TTCTTCTATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTTTCGCCTTTGAGCATTaGGGGCTTGAGCACCAGAGC +
Preference number: 5 (lower is better)
Translates to: FFYPGQLGRRRDSKVIFCFAFEH*GLEHQS
Trigger: GCTCTGGTGCTCAAGCCCCAAATGCTCAAAGGCGAA...ACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CAA 90 bp TGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGGCCTTTAGATCTCCGTCAGGGTCTGTCGAAGTGATTTaGAAGCTTCTAGGGTATATT +
Preference number: 5 (lower is better)
Translates to: CTELLGSCGPQAFRSPSGSVEVI*KLLGYI
Trigger: AATATACCCTAGAAGCTTCAAAATCACTTCGACAGA...CCCTGACGGAGATCTAAAGGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472167.5
CDS-3UTR CAA 90 bp CTGTGCCGTACGGCCCCCTTTTCAAGACAGAGCCTTCACCCTCCAATTCTTCAGTATGTCAATGCATCTTaGTTTAGCGGTGTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: LCRTAPFSRQSLHPPILQYVNAS*FSGVLP
Trigger: CGGCAGCACACCGCTAAACAAAGATGCATTGACATA...CTGAAGAATTGGAGGGTGAAGGCTCTGTCTTGAAAAGGGGGCCGTACGGCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CAA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGAACCTTTGCTTCATCGTaGATGTCCCATGTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRTFASS*MSHVKE
Trigger: TTCCTTCACATGGGACATCAACGATGAAGCAAAGGT...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CAA 90 bp CACCAATGCAATAGATTAAATGCTACCACCAAGCCAGATGCAGCCCCGCCTCCATTCCGCTCAGCTCCCTaGTCACAGAAGACCTTGATC +
Preference number: 5 (lower is better)
Translates to: HQCNRLNATTKPDAAPPPFRSAP*SQKTLI
Trigger: GATCAAGGTCTTCTGTGACAAGGGAGCTGAGCGGAA...TGGAGGCGGGGCTGCATCTGGCTTGGTGGTAGCATTTAATCTATTGCATTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CAA 90 bp ACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGTTCAAAGATGGGGTTTaGAGCATCAGGGCATCAAAG +
Preference number: 5 (lower is better)
Translates to: TVRSRNTCTELLGSCGPQFKDGV*SIRASK
Trigger: CTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAA...CTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CAA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATTCAAAGATGGGGTTTaGAGCATCAGGGCATCAAAG +
Preference number: 5 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRFKDGV*SIRASK
Trigger: CTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAA...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CAA 90 bp ACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGTGGGGAACATCGTATTaGTCTGAGATAGCTTCCATC +
Preference number: 5 (lower is better)
Translates to: TCAGDMADWGYLQLPNRKWGTSY*SEIASI
Trigger: GATGGAAGCTATCTCAGACAAATACGATGTTCCCCA...CTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS TCA 90 bp CAGAAACGTGGCATTTCCCCCTGCACTCTTTATGCTGTTAGGCACTaGATGTTACCTTTTGCTGTGATCTGGCTCAGGGTGCTCCACCTC +
Preference number: 5 (lower is better)
Translates to: QKRGISPCTLYAVRH*MLPFAVIWLRVLHL
Trigger: GAGGTGGAGCACCCTGAGCCAGATCACAGCAAAAGGTAACATTCAGTGCCTAACAGCATAAAGAGTGCAGGGGGAAATGCCACGTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439493.5
ENST00000497403.5
CDS GCA 90 bp AAACTGGATGGCTGCACCTCTGGGAATAAAAGCGGGCTCTTGAGCTaGTTACCTATGTCAATGCATCTTTGTTTAGCGGTGTGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: KLDGCTSGNKSGLLS*LPMSMHLCLAVCCR
Trigger: CCGGCAGCACACCGCTAAACAAAGATGCATTGACATAGGTAAGCAGCTCAAGAGCCCGCTTTTATTCCCAGAGGTGCAGCCATCCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS-3UTR CAA 90 bp AGCCTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCCACGACACTGTAGGCATGACCTTCTCTCTCTaGGAACCTTGTAGTAGTCAT +
Preference number: 5 (lower is better)
Translates to: SLSPFLTSASEQAHDTVGMTFSL*EPCSSH
Trigger: ATGACTACTACAAGGTTCCAAGAGAGAGAAGGTCAT...GCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CAA 90 bp AACCCATTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCATGACCTTCTCTCTCTaGGAACCTTGTAGTAGTCAT +
Preference number: 5 (lower is better)
Translates to: NPFPRHRPVLATWLTGVTMTFSL*EPCSSH
Trigger: ATGACTACTACAAGGTTCCAAGAGAGAGAAGGTCAT...GGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAATGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR CAA 90 bp ACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGCACATTTTTCAGTACTaGCACTCTGTTTTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TCAGDMADWGYLQLPNRKHIFQY*HSVFSS
Trigger: GCTGGAGAAAACAGAGTGCAAGTACTGAAAAATGTG...CTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000472167.5
CDS-3UTR CAA 90 bp TCTATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTGCCGCTGAACTGGTCAGTATaGAGATTCCGATCGAAAACC +
Preference number: 5 (lower is better)
Translates to: SIRASLVEGGTAKSSSVPLNWSV*RFRSKT
Trigger: GGTTTTCGATCGGAATCTCAATACTGACCAGTTCAG...CGGCACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CAA 90 bp CTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGATATGTCAATGCATCTTaGTTTAGCGGTGTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: LATWLTGVTCSCQTVRSRYVNAS*FSGVLP
Trigger: CGGCAGCACACCGCTAAACAAAGATGCATTGACATA...TCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CAA 90 bp CACCCTCCAATTCTTCAGAGGCAATGGGAAGGACATGAGTGCCCCGCTGCAAGTACCTTTGCTTCATCGTaGATGTCCCATGTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: HPPILQRQWEGHECPAASTFASS*MSHVKE
Trigger: TTCCTTCACATGGGACATCAACGATGAAGCAAAGGT...ACTTGCAGCGGGGCACTCATGTCCTTCCCATTGCCTCTGAAGAATTGGAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CAA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCACCTTTGCTTCATCGTaGATGTCCCATGTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: CAGDMADWGYLQLPNRKITFASS*MSHVKE
Trigger: TTCCTTCACATGGGACATCAACGATGAAGCAAAGGT...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CAA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTTCAAAGATGGGGTTTaGAGCATCAGGGCATCAAAG +
Preference number: 5 (lower is better)
Translates to: CAGDMADWGYLQLPNRKIFKDGV*SIRASK
Trigger: CTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAA...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CAA 90 bp CAAACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGTGGGGAACATCGTATTaGTCTGAGATAGCTTCCATC +
Preference number: 5 (lower is better)
Translates to: QTVRSRNTCTELLGSCGPWGTSY*SEIASI
Trigger: GATGGAAGCTATCTCAGACAAATACGATGTTCCCCA...CGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CAA 90 bp TTCCCTCGACATAGACCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTGAACTGCATTTCGAGTaGTATCACTTGGTACGCAAT +
Preference number: 5 (lower is better)
Translates to: FPRHRPVLATWLTGVTCSELHFE*YHLVRN
Trigger: ATTGCGTACCAAGTGATACAACTCGAAATGCAGTTC...ACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS TCA 90 bp CAGGAAGTAGGCTTCAGTCGCCGAAGGCTCATCATCACTTTCAGGTaGGCCTTAAACTCCGCGTCTGCGATCTCTCAGACTTCTGAAATA +
Preference number: 5 (lower is better)
Translates to: QEVGFSRRRLIITFR*ALNSASAISQTSEI
Trigger: TATTTCAGAAGTCTGAGAGATCGCAGACGCGGAGTTTAAGGCTCACCTGAAAGTGATGATGAGCCTTCGGCGACTGAAGCCTACTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS TCA 90 bp AGATATCACCTCCACTGTGCAAATGAGGAAATGAGGCAAAGCAAATaGGGAGTCAGACTCAAGGCTGAACAGGCAGGAGTGGCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: RYHLHCANEEMRQSK*GVRLKAEQAGVAEC
Trigger: GCACTCTGCCACTCCTGCCTGTTCAGCCTTGAGTCTGACTCCTCATTTGCTTTGCCTCATTTCCTCATTTGCACAGTGGAGGTGATATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS-3UTR CAA 90 bp TCCCATTTTGCTGTTACAGAAACGTGGCATTTCCCCCTGCACTCTTTATGCTGTATGCTCATCATCGCTTaGGTCGCTGCAGTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: SHFAVTETWHFPLHSLCCMLIIA*VAAVRG
Trigger: CCCTCTCACTGCAGCGACCAAAGCGATGATGAGCAT...ACAGCATAAAGAGTGCAGGGGGAAATGCCACGTTTCTGTAACAGCAAAATGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR CAA 90 bp TGTTCAGGTACGTCATGGTACTGTCTCCTGGCTTCTGTCGAAGTGATTTTGAAGTCAATGCCCAGCTGGTaGCCATGGGGAAGGACAATG +
Preference number: 5 (lower is better)
Translates to: CSGTSWYCLLASVEVILKSMPSW*PWGRTM
Trigger: CATTGTCCTTCCCCATGGCAACCAGCTGGGCATTGA...CTTCAAAATCACTTCGACAGAAGCCAGGAGACAGTACCATGACGTACCTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CAA 90 bp ACTGAATTCAGGCAAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTCTTTCGCCTTTGAGCATTaGGGGCTTGAGCACCAGAGC +
Preference number: 5 (lower is better)
Translates to: TEFRQGHEILKAKPIAFSFAFEH*GLEHQS
Trigger: GCTCTGGTGCTCAAGCCCCAAATGCTCAAAGGCGAA...AGAAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTTGCCTGAATTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CAA 90 bp ACCGTAAGATCTAGAAACACCTGCACTGAACTCCTGGGGAGCTGTGGCCCGCAGACTATAGGTATCAACTaGAATGTTAAGAGGCAACCC +
Preference number: 5 (lower is better)
Translates to: TVRSRNTCTELLGSCGPQTIGIN*NVKRQP
Trigger: GGGTTGCCTCTTAACATTCAAGTTGATACCTATAGT...CTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCTTACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CAA 90 bp AAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTCTGACTTCTGCTAGCTTCCGCTCAGCTCCCTaGTCACAGAAGACCTTGATC +
Preference number: 5 (lower is better)
Translates to: KGTKSLKPSLSPFLTSASFRSAP*SQKTLI
Trigger: GATCAAGGTCTTCTGTGACAAGGGAGCTGAGCGGAA...GCTAGCAGAAGTCAGAAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CAA 90 bp TCTGAGATAGCTTCCATCAAGCCCTTCAAAGATGGGGTTTTGAGCATCAGGGCATTCCGCTCAGCTCCCTaGTCACAGAAGACCTTGATC +
Preference number: 5 (lower is better)
Translates to: SEIASIKPFKDGVLSIRAFRSAP*SQKTLI
Trigger: GATCAAGGTCTTCTGTGACAAGGGAGCTGAGCGGAA...TGCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTGATGGAAGCTATCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CAA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCCTTGGTACGCAATACTaGCAATCTGTGTGCTGTAAT +
Preference number: 5 (lower is better)
Translates to: CAGDMADWGYLQLPNRKILGTQY*QSVCCN
Trigger: ATTACAGCACACAGATTGCAAGTATTGCGTACCAAG...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CAA 90 bp CCTGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATTCGAGTTGTATCACTaGGTACGCAATACTTGCAAT +
Preference number: 5 (lower is better)
Translates to: PVLATWLTGVTCSCQTVRFELYH*VRNTCN
Trigger: ATTGCAAGTATTGCGTACCAAGTGATACAACTCGAA...TCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CAA 90 bp CTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAGGGTATATTCAAAGTaGTTCCTCCTGAACGCCTTC +
Preference number: 5 (lower is better)
Translates to: LATWLTGVTCSCQTVRSRRVYSK*FLLNAF
Trigger: GAAGGCGTTCAGGAGGAACAACTTTGAATATACCCT...TCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405379.6
CDS TCA 90 bp GTATATTCAAAGTTGTTCCTCCTGAACGCCTTCCTTGAAGGTCTCTaGGAAGGTCGAGTCTGGAGTTCGCCTTTGAGCATTTGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: VYSKLFLLNAFLEGL*EGRVWSSPLSIWGL
Trigger: CAAGCCCCAAATGCTCAAAGGCGAACTCCAGACTCGACCTTCTCAGAGACCTTCAAGGAAGGCGTTCAGGAGGAACAACTTTGAATATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405379.6
ENST00000464418.5
CDS-3UTR CAA 90 bp AGGGGCTGCTCTGTCACAATTGGTATGCTGTTTCTATCTCTTTCACTAGTGGTTAACTGGACTTTCGGGTaGGGACAGTACACCCGATCC +
Preference number: 5 (lower is better)
Translates to: RGCSVTIGMLFLSLSLVVNWTFG*GQYTRS
Trigger: GGATCGGGTGTACTGTCCCAACCCGAAAGTCCAGTT...AACCACTAGTGAAAGAGATAGAAACAGCATACCAATTGTGACAGAGCAGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR CAA 90 bp AACTGTGATATCCATTCGCTTGTGAGAGGGAAGCAGTGGCACTTTAACATCAGAATGCTCATCATCGCTTaGGTCGCTGCAGTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: NCDIHSLVRGKQWHFNIRMLIIA*VAAVRG
Trigger: CCCTCTCACTGCAGCGACCAAAGCGATGATGAGCAT...TCTGATGTTAAAGTGCCACTGCTTCCCTCTCACAAGCGAATGGATATCACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CAA 90 bp AGACTTCTTCTGACTCCTTTCGAACGTAGAGCAGCACTCTCTTTGGTTCTTCTAATGCTCATCATCGCTTaGGTCGCTGCAGTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: RLLLTPFERRAALSLVLLMLIIA*VAAVRG
Trigger: CCCTCTCACTGCAGCGACCAAAGCGATGATGAGCAT...TAGAAGAACCAAAGAGAGTGCTGCTCTACGTTCGAAAGGAGTCAGAAGAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CAA 90 bp GTACTGAATTCAGGCAAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTTTGAGCATTTGGGGCTaGAGCACCAGAGCTGAACTG +
Preference number: 5 (lower is better)
Translates to: VLNSGKGTKSLKPSLSPFLSIWG*STRAEL
Trigger: CAGTTCAGCTCTGGTGCTCAAGCCCCAAATGCTCAA...AAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTTGCCTGAATTCAGTAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CAA 90 bp TGTTCAGGTACGTCATGGTACTGTCTCCTGGCTTCTGTCGAAGTGATTTTGAAGTTGAGCATTTGGGGCTaGAGCACCAGAGCTGAACTG +
Preference number: 5 (lower is better)
Translates to: CSGTSWYCLLASVEVILKLSIWG*STRAEL
Trigger: CAGTTCAGCTCTGGTGCTCAAGCCCCAAATGCTCAA...CTTCAAAATCACTTCGACAGAAGCCAGGAGACAGTACCATGACGTACCTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CAA 90 bp TTCTTCTATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTGTTATGTCAATGCATCTTaGTTTAGCGGTGTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: FFYPGQLGRRRDSKVIFCYVNAS*FSGVLP
Trigger: CGGCAGCACACCGCTAAACAAAGATGCATTGACATA...ACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CAA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCACTATAGGTATCAACTaGAATGTTAAGAGGCAACCC +
Preference number: 5 (lower is better)
Translates to: CAGDMADWGYLQLPNRKITIGIN*NVKRQP
Trigger: GGGTTGCCTCTTAACATTCAAGTTGATACCTATAGT...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CAA 90 bp ACTGAATTCAGGCAAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTCTAGAGCAGCACTCTCTTaGGTTCTTCTATCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: TEFRQGHEILKAKPIAFSRAALS*VLLSGP
Trigger: TGGCCCGGATAGAAGAACCAAAGAGAGTGCTGCTCT...AGAAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTTGCCTGAATTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CAA 90 bp TGGTTCTTCTATCCGGGCCAGCTTGGTAGAAGGAGGGACAGCAAAGTCATCTTCTTCAAAGATGGGGTTTaGAGCATCAGGGCATCAAAG +
Preference number: 5 (lower is better)
Translates to: WFFYPGQLGRRRDSKVIFFKDGV*SIRASK
Trigger: CTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAA...GAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGAAGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CAA 90 bp CTTTTCAAGACAGAGCCTTCACCCTCCAATTCTTCAGAGGCAATGGGAAGGACAACTGGCCGTTTGCAGTaGCCTTTCTTAGTCCACTTC +
Preference number: 5 (lower is better)
Translates to: LFKTEPSPSNSSEAMGRTTGRLQ*PFLVHF
Trigger: GAAGTGGACTAAGAAAGGCAACTGCAAACGGCCAGT...TGTCCTTCCCATTGCCTCTGAAGAATTGGAGGGTGAAGGCTCTGTCTTGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS TCA 90 bp TTGCCACTACAGCCCACAGAGAGGTTAGTTACACGGTTTAGCACGTaGCTAGGGAAGACTGTTAGGCAACTGCACAGCAGCAATATCTTT +
Preference number: 5 (lower is better)
Translates to: LPLQPTERLVTRFST*LGKTVRQLHSSNIF
Trigger: AAAGATATTGCTGCTGTGCAGTTGCCTAACAGTCTTCCCTAGTCACGTGCTAAACCGTGTAACTAACCTCTCTGTGGGCTGTAGTGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS CCA 90 bp GGAGCTGTCAGATGGCCTCTCTTATCAATGCCCAGCTGGTTGCCATaGGGAAGGACAATGTTAAATGGCACATTTTTCAGTACTTGCACT +
Preference number: 5 (lower is better)
Translates to: GAVRWPLLSMPSWLP*GRTMLNGTFFSTCT
Trigger: AGTGCAAGTACTGAAAAATGTGCCATTTAACATTGTCCTTCCCCATGGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324907.14
ENST00000464418.5
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS CCA 90 bp GTCGTATCTGGAGCTGTCAGATGGCCTCTCTTATCAATGCCCAGCTaGTTGCCATGGGGAAGGACAATGTTAAATGGCACATTTTTCAGT +
Preference number: 5 (lower is better)
Translates to: VVSGAVRWPLLSMPS*LPWGRTMLNGTFFS
Trigger: ACTGAAAAATGTGCCATTTAACATTGTCCTTCCCCATGGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCCAGATACGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324907.14
ENST00000464418.5
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS-3UTR CAA 90 bp AAACAAACTCCCATTTTGCTGTTACAGAAACGTGGCATTTCCCCCTGCACTCTTGCTCCACCTCTGGCTTaGCTGTTGATGACCTTCTCT +
Preference number: 5 (lower is better)
Translates to: KQTPILLLQKRGISPCTLAPPLA*LLMTFS
Trigger: AGAGAAGGTCATCAACAGCAAAGCCAGAGGTGGAGC...AAGAGTGCAGGGGGAAATGCCACGTTTCTGTAACAGCAAAATGGGAGTTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR CAA 90 bp ACTATAGGTATCAACTTGAATGTTAAGAGGCAACCCCTTCACTCCCTTCTGGGAGCTCCACCTCTGGCTTaGCTGTTGATGACCTTCTCT +
Preference number: 5 (lower is better)
Translates to: TIGINLNVKRQPLHSLLGAPPLA*LLMTFS
Trigger: AGAGAAGGTCATCAACAGCAAAGCCAGAGGTGGAGC...TCCCAGAAGGGAGTGAAGGGGTTGCCTCTTAACATTCAAGTTGATACCTATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CAA 90 bp TTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCATCAAGCCCTTCAAATCAATGCCCAGCTGGTaGCCATGGGGAAGGACAATG +
Preference number: 5 (lower is better)
Translates to: LSWGTSYLSEIASIKPFKSMPSW*PWGRTM
Trigger: CATTGTCCTTCCCCATGGCAACCAGCTGGGCATTGA...TTTGAAGGGCTTGATGGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CAA 90 bp TTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCATCAAGCCCTTCAAATTCGCCTTTGAGCATTaGGGGCTTGAGCACCAGAGC +
Preference number: 5 (lower is better)
Translates to: LSWGTSYLSEIASIKPFKFAFEH*GLEHQS
Trigger: GCTCTGGTGCTCAAGCCCCAAATGCTCAAAGGCGAA...TTTGAAGGGCTTGATGGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CAA 90 bp TTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCATCAAGCCCTTCAAAGTCTGGAGTTCGCCTTaGAGCATTTGGGGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: LSWGTSYLSEIASIKPFKVWSSP*SIWGLS
Trigger: GCTCAAGCCCCAAATGCTCAAAGGCGAACTCCAGAC...TTTGAAGGGCTTGATGGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CAA 90 bp TGTGCTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTCTGTCGAAGTGATTTaGAAGCTTCTAGGGTATATT +
Preference number: 5 (lower is better)
Translates to: CAGDMADWGYLQLPNRKISVEVI*KLLGYI
Trigger: AATATACCCTAGAAGCTTCAAAATCACTTCGACAGA...GATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS-3UTR CAA 90 bp ACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAACACCACCTTTGCTTCATCGTaGATGTCCCATGTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: TWLTGVTCSCQTVRSRNTTFASS*MSHVKE
Trigger: TTCCTTCACATGGGACATCAACGATGAAGCAAAGGT...GGTGTTTCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
CDS CCA 90 bp TCTGATCAACTGGGGTTACAGCATAGACGCCAGGGTCAAATTGCCTaGGTTCAAGTTCTGTGTCACCTGAGCAAGTTACTTCATCTCTTA +
Preference number: 5 (lower is better)
Translates to: SDQLGLQHRRQGQIA*VQVLCHLSKLLHLL
Trigger: TAAGAGATGAAGTAACTTGCTCAGGTGACACAGAACTTGAACCCAGGCAATTTGACCCTGGCGTCTATGCTGTAACCCCAGTTGATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS-3UTR CAA 90 bp AGGGGCTGCTCTGTCACAATTGGTATGCTGTTTCTATCTCTTTCACTAGTGGTTAACACTGGCCGTTTGTaGTCGTACTCCTGTGTCATC +
Preference number: 5 (lower is better)
Translates to: RGCSVTIGMLFLSLSLVVNTGRL*SYSCVI
Trigger: GATGACACAGGAGTACGACAACAAACGGCCAGTGTT...AACCACTAGTGAAAGAGATAGAAACAGCATACCAATTGTGACAGAGCAGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR CAA 90 bp ATAAATAACGTAGCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGTCAATGCCCAGCTGGTaGCCATGGGGAAGGACAATG +
Preference number: 5 (lower is better)
Translates to: INNVADVLKLPRDSVNSWSMPSW*PWGRTM
Trigger: CATTGTCCTTCCCCATGGCAACCAGCTGGGCATTGA...CCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGCTACGTTATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CAA 90 bp GATGGGGTTTTGAGCATCAGGGCATCAAAGACTTCTTCTGACTCCTTTCGAACGCTGAACTGGTCAGTATaGAGATTCCGATCGAAAACC +
Preference number: 5 (lower is better)
Translates to: DGVLSIRASKTSSDSFRTLNWSV*RFRSKT
Trigger: GGTTTTCGATCGGAATCTCAATACTGACCAGTTCAG...CGTTCGAAAGGAGTCAGAAGAAGTCTTTGATGCCCTGATGCTCAAAACCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CAA 90 bp CTGGCGACATGGCTGACTGGGGTTACCTGCAGTTGCCAAACCGTAAGATCTAGAAATATTTTCCCAATCTaGTCATGGGGAACATCGTAT +
Preference number: 5 (lower is better)
Translates to: LATWLTGVTCSCQTVRSRNIFPI*SWGTSY
Trigger: ATACGATGTTCCCCATGACAAGATTGGGAAAATATT...TCTAGATCTTACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000472167.5
ENST00000480736.1
CDS-3UTR CAA 90 bp CACCAATGCAATAGATTAAATGCTACCACCAAGCCAGATGCAGCCCCGCCTCCATCATTTGAGAAGGTTTaGCTATGCTACAGAATGCCT +
Preference number: 5 (lower is better)
Translates to: HQCNRLNATTKPDAAPPPSFEKV*LCYRMP
Trigger: AGGCATTCTGTAGCATAGCAAAACCTTCTCAAATGA...TGGAGGCGGGGCTGCATCTGGCTTGGTGGTAGCATTTAATCTATTGCATTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS TCA 90 bp TCGAGATCAATGAAGGGTTTGAAAACTGTGATATCCATTCGCTTGTaGGAGGGAAGCAGTGGCACTTTAACATCAGAAACTGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SRSMKGLKTVISIRL*EGSSGTLTSETGSW
Trigger: CCAGCTCCCAGTTTCTGATGTTAAAGTGCCACTGCTTCCCTCTCACAAGCGAATGGATATCACAGTTTTCAAACCCTTCATTGATCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472167.5
CDS CCA 90 bp TTACTGTGTTTTACTAGAAACCTGAAGCTATGCGATCTGATCAACTaGGGTTACAGCATAGACGCCAGGGTCAAATTGCCTGGGTTCAAG +
Preference number: 5 (lower is better)
Translates to: LLCFTRNLKLCDLIN*GYSIDARVKLPGFK
Trigger: CTTGAACCCAGGCAATTTGACCCTGGCGTCTATGCTGTAACCCCAGTTGATCAGATCGCATAGCTTCAGGTTTCTAGTAAAACACAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS-3UTR CAA 90 bp TTGTCATGGGGAACATCGTATTTGTCTGAGATAGCTTCCATCAAGCCCTTCAAAAACACTGGCCGTTTGTaGTCGTACTCCTGTGTCATC +
Preference number: 5 (lower is better)
Translates to: LSWGTSYLSEIASIKPFKNTGRL*SYSCVI
Trigger: GATGACACAGGAGTACGACAACAAACGGCCAGTGTT...TTTGAAGGGCTTGATGGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472167.5
CDS-3UTR CAA 90 bp TTCTTGAATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATAGTGCCCCGCTGCAAGTaGGCAAAGTGCACGTCAGGA +
Preference number: 5 (lower is better)
Translates to: FLNIFPILSWGTSYLSEIVPRCK*AKCTSG
Trigger: TCCTGACGTGCACTTTGCCAACTTGCAGCGGGGCAC...TATCTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CAA 90 bp ACTGAATTCAGGCAAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTCTTGGGGAACATCGTATTaGTCTGAGATAGCTTCCATC +
Preference number: 5 (lower is better)
Translates to: TEFRQGHEILKAKPIAFSWGTSY*SEIASI
Trigger: GATGGAAGCTATCTCAGACAAATACGATGTTCCCCA...AGAAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTTGCCTGAATTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CAA 90 bp CACCAATGCAATAGATTAAATGCTACCACCAAGCCAGATGCAGCCCCGCCTCCAAATATTTTCCCAATCTaGTCATGGGGAACATCGTAT +
Preference number: 5 (lower is better)
Translates to: HQCNRLNATTKPDAAPPPNIFPI*SWGTSY
Trigger: ATACGATGTTCCCCATGACAAGATTGGGAAAATATT...TGGAGGCGGGGCTGCATCTGGCTTGGTGGTAGCATTTAATCTATTGCATTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CAA 90 bp AAATCCTTAAAGCCAAGCCTATCGCCTTTTCTGACTTCTGCTAGCGAGCAGGCCCAGAATCTCTGTCATTaGAGAAGGTTTTGCTATGCT +
Preference number: 5 (lower is better)
Translates to: KSLKPSLSPFLTSASEQAQNLCH*RRFCYA
Trigger: AGCATAGCAAAACCTTCTCAAATGACAGAGATTCTG...GGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGCTTGGCTTTAAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CAA 90 bp CATGTGAAGGAAATGGCGTTATACGCAATCTCCTCGATGTTACTGATAGTGTTGACCAACACTGGCCGTTaGCAGTTGCCTTTCTTAGTC +
Preference number: 5 (lower is better)
Translates to: HVKEMALYAISSMLLIVLTNTGR*QLPFLV
Trigger: GACTAAGAAAGGCAACTGCAAACGGCCAGTGTTGGT...CAACACTATCAGTAACATCGAGGAGATTGCGTATAACGCCATTTCCTTCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS TCA 90 bp ATATTCAAAGTTGTTCCCAGAAACACTGTCAAAAACATAGTCCTCTaGATTCATGCCAGGCATCCGCAGACTGAGATCCGAGGGGAAGAA +
Preference number: 5 (lower is better)
Translates to: IFKVVPRNTVKNIVL*IHARHPQTEIRGEE
Trigger: TTCTTCCCCTCGGATCTCAGTCTGCGGATGCCTGGCATGAATTCAGAGGACTATGTTTTTGACAGTGTTTCTGGGAACAACTTTGAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS CCA 90 bp CCCACAAGGAGTAACTCTAGCCAATTAGAGTTACTCCAACTGAACTaGAGGCAACTCTTCAATGGGAAAAGCCCAAGACAGAAGAATCTT +
Preference number: 5 (lower is better)
Translates to: PTRSNSSQLELLQLN*RQLFNGKSPRQKNL
Trigger: AAGATTCTTCTGTCTTGGGCTTTTCCCATTGAAGAGTTGCCTCCAGTTCAGTTGGAGTAACTCTAATTGGCTAGAGTTACTCCTTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS-3UTR CAA 90 bp TTTTGCTGTTACAGAAACGTGGCATTTCCCCCTGCACTCTTTATGCTGTTAGGCATGACCTTCTCTCTCTaGGAACCTTGTAGTAGTCAT +
Preference number: 5 (lower is better)
Translates to: FCCYRNVAFPPALFMLLGMTFSL*EPCSSH
Trigger: ATGACTACTACAAGGTTCCAAGAGAGAGAAGGTCAT...GCCTAACAGCATAAAGAGTGCAGGGGGAAATGCCACGTTTCTGTAACAGCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR CAA 90 bp TCGTTGATGTCCCATGTGAAGGAAATGGCGTTATACGCAATCTCCTCGATGTTAGCTGCTCTGTCACAATaGGTATGCTGTTTCTTTTGC +
Preference number: 5 (lower is better)
Translates to: SLMSHVKEMALYAISSMLAALSQ*VCCFFC
Trigger: GCAAAAGAAACAGCATACCAATTGTGACAGAGCAGC...TAACATCGAGGAGATTGCGTATAACGCCATTTCCTTCACATGGGACATCAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CAA 90 bp ACTATAGGTATCAACTTGAATGTTAAGAGGCAACCCCTTCACTCCCTTCTGGGATTCAAAGATGGGGTTTaGAGCATCAGGGCATCAAAG +
Preference number: 5 (lower is better)
Translates to: TIGINLNVKRQPLHSLLGFKDGV*SIRASK
Trigger: CTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAA...TCCCAGAAGGGAGTGAAGGGGTTGCCTCTTAACATTCAAGTTGATACCTATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CAA 90 bp AGACTTCTTCTGACTCCTTTCGAACGTAGAGCAGCACTCTCTTTGGTTCTTCTATGGGGAACATCGTATTaGTCTGAGATAGCTTCCATC +
Preference number: 5 (lower is better)
Translates to: RLLLTPFERRAALSLVLLWGTSY*SEIASI
Trigger: GATGGAAGCTATCTCAGACAAATACGATGTTCCCCA...TAGAAGAACCAAAGAGAGTGCTGCTCTACGTTCGAAAGGAGTCAGAAGAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CAA 90 bp TCGTATTTGTCTGAGATAGCTTCCATCAAGCCCTTCAAAGATGGGGTTTTGAGCCACATTTTTCAGTACTaGCACTCTGTTTTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SYLSEIASIKPFKDGVLSHIFQY*HSVFSS
Trigger: GCTGGAGAAAACAGAGTGCAAGTACTGAAAAATGTG...GCTCAAAACCCCATCTTTGAAGGGCTTGATGGAAGCTATCTCAGACAAATACGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CAA 90 bp GGCTGCTCTGTCACAATTGGTATGCTGTTTCTATCTCTTTCACTAGTGGTTGTTGCTGCTCTGTCACAATaGGTATGCTGTTTCTATCTC +
Preference number: 5 (lower is better)
Translates to: GCSVTIGMLFLSLSLVVVAALSQ*VCCFYL
Trigger: GAGATAGAAACAGCATACCAATTGTGACAGAGCAGC...AACAACCACTAGTGAAAGAGATAGAAACAGCATACCAATTGTGACAGAGCAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS-3UTR CAA 90 bp GCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGAATAAAGTTTTCGCTGCTCTGTCACAATaGGTATGCTGTTTCTTTTGC +
Preference number: 5 (lower is better)
Translates to: ADVLKLPRDSVNSWNKVFAALSQ*VCCFFC
Trigger: GCAAAAGAAACAGCATACCAATTGTGACAGAGCAGC...GAAAACTTTATTCCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324907.14
CDS-3UTR CAA 90 bp ACTGAATTCAGGCAAGGGCACGAAATCCTTAAAGCCAAGCCTATCGCCTTTTCTTCTGTCGAAGTGATTTaGAAGCTTCTAGGGTATATT +
Preference number: 5 (lower is better)
Translates to: TEFRQGHEILKAKPIAFSSVEVI*KLLGYI
Trigger: AATATACCCTAGAAGCTTCAAAATCACTTCGACAGA...AGAAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGCCCTTGCCTGAATTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CAA 90 bp TCGTTGATGTCCCATGTGAAGGAAATGGCGTTATACGCAATCTCCTCGATGTTAACTATAGGTATCAACTaGAATGTTAAGAGGCAACCC +
Preference number: 5 (lower is better)
Translates to: SLMSHVKEMALYAISSMLTIGIN*NVKRQP
Trigger: GGGTTGCCTCTTAACATTCAAGTTGATACCTATAGT...TAACATCGAGGAGATTGCGTATAACGCCATTTCCTTCACATGGGACATCAACGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CAA 90 bp AACGTAGCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGAATAAATGGGGAACATCGTATTaGTCTGAGATAGCTTCCATC +
Preference number: 5 (lower is better)
Translates to: NVADVLKLPRDSVNSWNKWGTSY*SEIASI
Trigger: GATGGAAGCTATCTCAGACAAATACGATGTTCCCCA...TTTATTCCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGCTACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CAA 90 bp GGCTGCTCTGTCACAATTGGTATGCTGTTTCTATCTCTTTCACTAGTGGTTGTTAAACAAACTCCCATTTaGCTGTTACAGAAACGTGGC +
Preference number: 5 (lower is better)
Translates to: GCSVTIGMLFLSLSLVVVKQTPI*LLQKRG
Trigger: GCCACGTTTCTGTAACAGCAAAATGGGAGTTTGTTT...AACAACCACTAGTGAAAGAGATAGAAACAGCATACCAATTGTGACAGAGCAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439493.5
CDS TCA 90 bp TCAAGTTCTGTGTCACCTGAGCAAGTTACTTCATCTCTTAGTAACTaGATCCTCATCTGCAAAATGGGGACAATAATGGCATCCATTCTC +
Preference number: 5 (lower is better)
Translates to: SSSVSPEQVTSSLSN*ILICKMGTIMASIL
Trigger: GAGAATGGATGCCATTATTGTCCCCATTTTGCAGATGAGGATTCAGTTACTAAGAGATGAAGTAACTTGCTCAGGTGACACAGAACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS-3UTR CAA 90 bp TTCACAGAGATGAAAACCTTTGCTTCATCGTTGATGTCCCATGTGAAGGAAATGATGACCTTCTCTCTCTaGGAACCTTGTAGTAGTCAT +
Preference number: 5 (lower is better)
Translates to: FTEMKTFASSLMSHVKEMMTFSL*EPCSSH
Trigger: ATGACTACTACAAGGTTCCAAGAGAGAGAAGGTCAT...CATTTCCTTCACATGGGACATCAACGATGAAGCAAAGGTTTTCATCTCTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CAA 90 bp TGTGATATCCATTCGCTTGTGAGAGGGAAGCAGTGGCACTTTAACATCAGAAACTCTGTCGAAGTGATTTaGAAGCTTCTAGGGTATATT +
Preference number: 5 (lower is better)
Translates to: CDIHSLVRGKQWHFNIRNSVEVI*KLLGYI
Trigger: AATATACCCTAGAAGCTTCAAAATCACTTCGACAGA...GTTTCTGATGTTAAAGTGCCACTGCTTCCCTCTCACAAGCGAATGGATATCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CAA 90 bp TGCTTCACAATGTTGTCGTCCATGTTCACCAGGATCCCCTTTTTACACTTCTTGAATATTTTCCCAATCTaGTCATGGGGAACATCGTAT +
Preference number: 5 (lower is better)
Translates to: CFTMLSSMFTRIPFLHFLNIFPI*SWGTSY
Trigger: ATACGATGTTCCCCATGACAAGATTGGGAAAATATT...CAAGAAGTGTAAAAAGGGGATCCTGGTGAACATGGACGACAACATTGTGAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CAA 90 bp CACTTCTTGAATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGCACATTTTTCAGTACTaGCACTCTGTTTTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: HFLNIFPILSWGTSYLSEHIFQY*HSVFSS
Trigger: GCTGGAGAAAACAGAGTGCAAGTACTGAAAAATGTG...CTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000464418.5
ENST00000472167.5
CDS-3UTR CAA 90 bp AACGTAGCAGATGTCCTAAAGCTTCCCAGAGACTCTGTTAACTCTTGGAATAAAAATATTTTCCCAATCTaGTCATGGGGAACATCGTAT +
Preference number: 5 (lower is better)
Translates to: NVADVLKLPRDSVNSWNKNIFPI*SWGTSY
Trigger: ATACGATGTTCCCCATGACAAGATTGGGAAAATATT...TTTATTCCAAGAGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGCTACGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324907.14
ENST00000405379.6
CDS-3UTR CAA 90 bp TTCACAGAGATGAAAACCTTTGCTTCATCGTTGATGTCCCATGTGAAGGAAATGAATATTTTCCCAATCTaGTCATGGGGAACATCGTAT +
Preference number: 5 (lower is better)
Translates to: FTEMKTFASSLMSHVKEMNIFPI*SWGTSY
Trigger: ATACGATGTTCCCCATGACAAGATTGGGAAAATATT...CATTTCCTTCACATGGGACATCAACGATGAAGCAAAGGTTTTCATCTCTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS-3UTR CAA 90 bp TTCTTGAATATTTTCCCAATCTTGTCATGGGGAACATCGTATTTGTCTGAGATAAGGGTATATTCAAAGTaGTTCCTCCTGAACGCCTTC +
Preference number: 5 (lower is better)
Translates to: FLNIFPILSWGTSYLSEIRVYSK*FLLNAF
Trigger: GAAGGCGTTCAGGAGGAACAACTTTGAATATACCCT...TATCTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS TCA 90 bp AGAGGGAAGAACAAATCAAACAAGAGGAATTGTGTTGATAACTGTTaGGGCTGGTCATGGATACATGTGGGCTTATACTGTTTTTCTATT +
Preference number: 5 (lower is better)
Translates to: RGKNKSNKRNCVDNC*GWSWIHVGLYCFSI
Trigger: AATAGAAAAACAGTATAAGCCCACATGTATCCATGACCAGCCTCAACAGTTATCAACACAATTCCTCTTGTTTGATTTGTTCTTCCCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS CCA 72 bp TCATCGCGCCCGCTCGCCGCTGCCGGGCCGCAGAACTaGACTTTCGGGTTGGGACAGTACACCCGATCCGGG +
Preference number: 6 (lower is better)
Translates to: SSRPLAAAGPQN*TFGLGQYTRSG
Trigger: CCCGGATCGGGTGTACTGTCCCAACCCGAAAGTCCAGTTCTGCGGCCCGGCAGCGGCGAGCGGGCGCGATGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000439493.5
ENST00000464418.5
ENST00000497403.5
CDS GCA 72 bp TTGTCGTACTCCTGTGTCATCGCGCCCGCTCGCCGCTaGCGGGCCGCAGAACTGGACTTTCGGGTTGGGACA +
Preference number: 6 (lower is better)
Translates to: LSYSCVIAPARR*RAAELDFRVGT
Trigger: TGTCCCAACCCGAAAGTCCAGTTCTGCGGCCCGGCAGCGGCGAGCGGGCGCGATGACACAGGAGTACGACAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324907.14
ENST00000439493.5
ENST00000464418.5
ENST00000472167.5
ENST00000497403.5
CDS CCA 72 bp CACCACCCGCTCAGTGGGCTCAGGATGATACACTGCTaGGGGGATTCCCACAGCGAAGCCATGTGGCTGGGT +
Preference number: 6 (lower is better)
Translates to: HHPLSGLRMIHC*GDSHSEAMWLG
Trigger: ACCCAGCCACATGGCTTCGCTGTGGGAATCCCCCCAGCAGTGTATCATCCTGAGCCCACTGAGCGGGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000464418.5
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS TCA 72 bp GTGGGCACATGTCCCATTACTGCATGGGAGCAATGGTaGGAGCACTGGTTCCAGGAGGCCGAGGACAGTGTT +
Preference number: 6 (lower is better)
Translates to: VGTCPITAWEQW*EHWFQEAEDSV
Trigger: AACACTGTCCTCGGCCTCCTGGAACCAGTGCTCTCACCATTGCTCCCATGCAGTAATGGGACATGTGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS CCA 72 bp GCTTCTGGCCCTAGTGTCCTGTGGAAAGCCACCACGTaGGCACATGTCCCATTACTGCATGGGAGCAATGGT +
Preference number: 6 (lower is better)
Translates to: ASGPSVLWKATT*AHVPLLHGSNG
Trigger: ACCATTGCTCCCATGCAGTAATGGGACATGTGCCCACGTGGTGGCTTTCCACAGGACACTAGGGCCAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS TCA 72 bp GATCCGAGGGGAAGAAAACCTCCTGAACGCCTTCCTTaGAGGTCTCTGAGAAGGTCGAGTCTGGAGTTCGCC +
Preference number: 6 (lower is better)
Translates to: DPRGRKPPERLP*RSLRRSSLEFA
Trigger: GGCGAACTCCAGACTCGACCTTCTCAGAGACCTTCAAGGAAGGCGTTCAGGAGGTTTTCTTCCCCTCGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS GCA 72 bp TGTGGAAAGCCACCACGTGGGCACATGTCCCATTACTaGATGGGAGCAATGGTGAGAGCACTGGTTCCAGGA +
Preference number: 6 (lower is better)
Translates to: CGKPPRGHMSHY*MGAMVRALVPG
Trigger: TCCTGGAACCAGTGCTCTCACCATTGCTCCCATGCAGTAATGGGACATGTGCCCACGTGGTGGCTTTCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS TCA 72 bp GGCTTCAGTCGCCGAAGGCTCATCATCACTTTCAGGTaGGCCTTAAACTCCGCGTCTGCGATCTCTCAGACT +
Preference number: 6 (lower is better)
Translates to: GFSRRRLIITFR*ALNSASAISQT
Trigger: AGTCTGAGAGATCGCAGACGCGGAGTTTAAGGCTCACCTGAAAGTGATGATGAGCCTTCGGCGACTGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS CAA 72 bp GGCGCCCAGACCTCACCACCCACCTTTGCTTCATCGTaGATGTCCCATGTGAAGGAAATGGCGTTATACGCA +
Preference number: 6 (lower is better)
Translates to: GAQTSPPTFASS*MSHVKEMALYA
Trigger: TGCGTATAACGCCATTTCCTTCACATGGGACATCAACGATGAAGCAAAGGTGGGTGGTGAGGTCTGGGCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS TCA 72 bp CATAGTCCTCTGAATTCATGCCAGGCATCCGCAGACTaGGATCCGAGGGGAAGAAAACCTCCTGAACGCCTT +
Preference number: 6 (lower is better)
Translates to: HSPLNSCQASAD*DPRGRKPPERL
Trigger: AAGGCGTTCAGGAGGTTTTCTTCCCCTCGGATCTCAGTCTGCGGATGCCTGGCATGAATTCAGAGGACTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS TCA 72 bp CAGCCCACAGAGAGGTTAGTTACACGGTTTAGCACGTaGCTAGGGAAGACTGTTAGGCAACTGCACAGCAGC +
Preference number: 6 (lower is better)
Translates to: QPTERLVTRFST*LGKTVRQLHSS
Trigger: GCTGCTGTGCAGTTGCCTAACAGTCTTCCCTAGTCACGTGCTAAACCGTGTAACTAACCTCTCTGTGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS CCA 72 bp ATGGAGACAGTGACTGTCGTATCTGGAGCTGTCAGATaGCCTCTCTTATCAATGCCCAGCTGGTTGCCATGG +
Preference number: 6 (lower is better)
Translates to: METVTVVSGAVR*PLLSMPSWLPW
Trigger: CCATGGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCCAGATACGACAGTCACTGTCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324907.14
ENST00000464418.5
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS CCA 72 bp GGAGCTGTCAGATGGCCTCTCTTATCAATGCCCAGCTaGTTGCCATGGGGAAGGACAATGTTAAATGGCACA +
Preference number: 6 (lower is better)
Translates to: GAVRWPLLSMPS*LPWGRTMLNGT
Trigger: TGTGCCATTTAACATTGTCCTTCCCCATGGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324907.14
ENST00000464418.5
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS CAA 72 bp GATCTGGCTCAGGGTGCTCCACCTCTGGCTTTGCTGTaGATGACCTTCTCTCTCTTGGAACCTTGTAGTAGT +
Preference number: 6 (lower is better)
Translates to: DLAQGAPPLALL*MTFSLLEPCSS
Trigger: ACTACTACAAGGTTCCAAGAGAGAGAAGGTCATCAACAGCAAAGCCAGAGGTGGAGCACCCTGAGCCAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324907.14
ENST00000439493.5
ENST00000464418.5
ENST00000472167.5
ENST00000497403.5
CDS CAA 72 bp GGTCGAGTCTGGAGTTCGCCTTTGAGCATTTGGGGCTaGAGCACCAGAGCTGAACTGGTCAGTATTGAGATT +
Preference number: 6 (lower is better)
Translates to: GRVWSSPLSIWG*STRAELVSIEI
Trigger: AATCTCAATACTGACCAGTTCAGCTCTGGTGCTCAAGCCCCAAATGCTCAAAGGCGAACTCCAGACTCGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324907.14
ENST00000405379.6
ENST00000464418.5
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS TCA 72 bp GAAGAAAACCTCCTGAACGCCTTCCTTGAAGGTCTCTaGGAAGGTCGAGTCTGGAGTTCGCCTTTGAGCATT +
Preference number: 6 (lower is better)
Translates to: EENLLNAFLEGL*EGRVWSSPLSI
Trigger: AATGCTCAAAGGCGAACTCCAGACTCGACCTTCTCAGAGACCTTCAAGGAAGGCGTTCAGGAGGTTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS TCA 72 bp AAGTTGTTCCTCCTGAACGCCTTCCTTGAAGGTCTCTaGGAAGGTCGAGTCTGGAGTTCGCCTTTGAGCATT +
Preference number: 6 (lower is better)
Translates to: KLFLLNAFLEGL*EGRVWSSPLSI
Trigger: AATGCTCAAAGGCGAACTCCAGACTCGACCTTCTCAGAGACCTTCAAGGAAGGCGTTCAGGAGGAACAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405379.6
ENST00000464418.5
CDS TCA 72 bp GGTATATTCAAAGTTGTTCCTCCTGAACGCCTTCCTTaGAGGTCTCTGAGAAGGTCGAGTCTGGAGTTCGCC +
Preference number: 6 (lower is better)
Translates to: GIFKVVPPERLP*RSLRRSSLEFA
Trigger: GGCGAACTCCAGACTCGACCTTCTCAGAGACCTTCAAGGAAGGCGTTCAGGAGGAACAACTTTGAATATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405379.6
ENST00000464418.5
CDS TCA 72 bp GGCATTTCCCCCTGCACTCTTTATGCTGTTAGGCACTaGATGTTACCTTTTGCTGTGATCTGGCTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: GISPCTLYAVRH*MLPFAVIWLRV
Trigger: CACCCTGAGCCAGATCACAGCAAAAGGTAACATTCAGTGCCTAACAGCATAAAGAGTGCAGGGGGAAATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439493.5
ENST00000497403.5
CDS GCA 72 bp ATCCTCACTAGTGTAGGACCGCCGCTGTGGATAAAGTaGTTCATTCTGAAGAACCAACACTGGCCGTTTGCA +
Preference number: 6 (lower is better)
Translates to: ILTSVGPPLWIK*FILKNQHWPFA
Trigger: TGCAAACGGCCAGTGTTGGTTCTTCAGAATGAAGCACTTTATCCACAGCGGCGGTCCTACACTAGTGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464418.5
CDS GCA 72 bp GGCTGCACCTCTGGGAATAAAAGCGGGCTCTTGAGCTaGTTACCTATGTCAATGCATCTTTGTTTAGCGGTG +
Preference number: 6 (lower is better)
Translates to: GCTSGNKSGLLS*LPMSMHLCLAV
Trigger: CACCGCTAAACAAAGATGCATTGACATAGGTAAGCAGCTCAAGAGCCCGCTTTTATTCCCAGAGGTGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS CAA 90 bp TTTTGCTGTGATCTGGCTCAGGGTGCTCCACCTCTGGCTTTGCTGTaGATGACCTTCTCTCTCTTGGAACCTTGTAGTAGTCATAGAGCA +
Preference number: 6 (lower is better)
Translates to: FCCDLAQGAPPLALL*MTFSLLEPCSSHRA
Trigger: TGCTCTATGACTACTACAAGGTTCCAAGAGAGAGAAGGTCATCAACAGCAAAGCCAGAGGTGGAGCACCCTGAGCCAGATCACAGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324907.14
ENST00000439493.5
ENST00000464418.5
ENST00000472167.5
ENST00000497403.5
CDS CAA 90 bp GTTACCTTTTGCTGTGATCTGGCTCAGGGTGCTCCACCTCTGGCTTaGCTGTTGATGACCTTCTCTCTCTTGGAACCTTGTAGTAGTCAT +
Preference number: 6 (lower is better)
Translates to: VTFCCDLAQGAPPLA*LLMTFSLLEPCSSH
Trigger: ATGACTACTACAAGGTTCCAAGAGAGAGAAGGTCATCAACAGCAAAGCCAGAGGTGGAGCACCCTGAGCCAGATCACAGCAAAAGGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439493.5
ENST00000497403.5
CDS GCA 72 bp ATCCTCACTAGTGTAGGACCGCCGCTGTGGATAAAGTaGTTCATTCTGAAGAACCAACACTGGCCGTTTGTT +
Preference number: 6 (lower is better)
Translates to: ILTSVGPPLWIK*FILKNQHWPFV
Trigger: AACAAACGGCCAGTGTTGGTTCTTCAGAATGAAGCACTTTATCCACAGCGGCGGTCCTACACTAGTGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000439493.5
ENST00000472167.5
ENST00000497403.5
CDS GCA 72 bp GTCAGACTCAAGGCTGAACAGGCAGGAGTGGCAGAGTaGAACTTAATCTCAATGTTTCACACACTGGACTCT +
Preference number: 6 (lower is better)
Translates to: VRLKAEQAGVAE*NLISMFHTLDS
Trigger: AGAGTCCAGTGTGTGAAACATTGAGATTAAGTTGCACTCTGCCACTCCTGCCTGTTCAGCCTTGAGTCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS CCA 72 bp AACTGTGATATCCATTCGCTTGTGAGAGGGAAGCAGTaGCACTTTAACATCAGAAACTGGGAGCTGGGGTCA +
Preference number: 6 (lower is better)
Translates to: NCDIHSLVRGKQ*HFNIRNWELGS
Trigger: TGACCCCAGCTCCCAGTTTCTGATGTTAAAGTGCCACTGCTTCCCTCTCACAAGCGAATGGATATCACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472167.5
CDS CCA 72 bp GGAGGCCGAGGACAGTGTTTGGAACAGATCAGTAGCTaGCATAAAAATTCAAATGCTTTCGGCAGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: GGRGQCLEQISS*HKNSNAFGRKL
Trigger: CAGCTTCCTGCCGAAAGCATTTGAATTTTTATGCCAGCTACTGATCTGTTCCAAACACTGTCCTCGGCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS CCA 72 bp AGTTGTCAAATCATTAAACTCCTCCCATTTCTCAAATaGCTGGACATAAGGCGCCCAGACCTCACCACCCAC +
Preference number: 6 (lower is better)
Translates to: SCQIIKLLPFLK*LDIRRPDLTTH
Trigger: GTGGGTGGTGAGGTCTGGGCGCCTTATGTCCAGCCATTTGAGAAATGGGAGGAGTTTAATGATTTGACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS CAA 72 bp GCTGTCAGATGGCCTCTCTTATCAATGCCCAGCTGGTaGCCATGGGGAAGGACAATGTTAAATGGCACATTT +
Preference number: 6 (lower is better)
Translates to: AVRWPLLSMPSW*PWGRTMLNGTF
Trigger: AAATGTGCCATTTAACATTGTCCTTCCCCATGGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324907.14
ENST00000464418.5
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS CAA 90 bp TGTTTCTTTTGCTGTGATCTGGCTCAGGGTGCTCCACCTCTGGCTTaGCTGTTGATGACCTTCTCTCTCTTGGAACCTTGTAGTAGTCAT +
Preference number: 6 (lower is better)
Translates to: CFFCCDLAQGAPPLA*LLMTFSLLEPCSSH
Trigger: ATGACTACTACAAGGTTCCAAGAGAGAGAAGGTCATCAACAGCAAAGCCAGAGGTGGAGCACCCTGAGCCAGATCACAGCAAAAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324907.14
ENST00000464418.5
ENST00000472167.5
CDS CAA 90 bp GTATCTGGAGCTGTCAGATGGCCTCTCTTATCAATGCCCAGCTGGTaGCCATGGGGAAGGACAATGTTAAATGGCACATTTTTCAGTACT +
Preference number: 6 (lower is better)
Translates to: VSGAVRWPLLSMPSW*PWGRTMLNGTFFST
Trigger: AGTACTGAAAAATGTGCCATTTAACATTGTCCTTCCCCATGGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCCAGATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324907.14
ENST00000464418.5
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS CAA 90 bp TTTAGAAAACTGGATGGCTGCACCTCTGGGAATAAAAGCGGGCTCTaGAGCTGCTTACCTATGTCAATGCATCTTTGTTTAGCGGTGTGC +
Preference number: 6 (lower is better)
Translates to: FRKLDGCTSGNKSGL*SCLPMSMHLCLAVC
Trigger: GCACACCGCTAAACAAAGATGCATTGACATAGGTAAGCAGCTCAAGAGCCCGCTTTTATTCCCAGAGGTGCAGCCATCCAGTTTTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS TCA 72 bp GTTGTTCCCAGAAACACTGTCAAAAACATAGTCCTCTaGATTCATGCCAGGCATCCGCAGACTGAGATCCGA +
Preference number: 6 (lower is better)
Translates to: VVPRNTVKNIVL*IHARHPQTEIR
Trigger: TCGGATCTCAGTCTGCGGATGCCTGGCATGAATTCAGAGGACTATGTTTTTGACAGTGTTTCTGGGAACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS CCA 72 bp AGATGGCCTCTCTTATCAATGCCCAGCTGGTTGCCATaGGGAAGGACAATGTTAAATGGCACATTTTTCAGT +
Preference number: 6 (lower is better)
Translates to: RWPLLSMPSWLP*GRTMLNGTFFS
Trigger: ACTGAAAAATGTGCCATTTAACATTGTCCTTCCCCATGGCAACCAGCTGGGCATTGATAAGAGAGGCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324907.14
ENST00000464418.5
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS CCA 72 bp TTTACTAGAAACCTGAAGCTATGCGATCTGATCAACTaGGGTTACAGCATAGACGCCAGGGTCAAATTGCCT +
Preference number: 6 (lower is better)
Translates to: FTRNLKLCDLIN*GYSIDARVKLP
Trigger: AGGCAATTTGACCCTGGCGTCTATGCTGTAACCCCAGTTGATCAGATCGCATAGCTTCAGGTTTCTAGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS CCA 72 bp AGATATTACCCCTTAAAGCAATTGCAGACTGAACAGTaGGGACATTCTCAGGTTAGCCAGCTACATGGCTTC +
Preference number: 6 (lower is better)
Translates to: RYYPLKQLQTEQ*GHSQVSQLHGF
Trigger: GAAGCCATGTAGCTGGCTAACCTGAGAATGTCCCCACTGTTCAGTCTGCAATTGCTTTAAGGGGTAATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS CCA 72 bp AGTAACTCTAGCCAATTAGAGTTACTCCAACTGAACTaGAGGCAACTCTTCAATGGGAAAAGCCCAAGACAG +
Preference number: 6 (lower is better)
Translates to: SNSSQLELLQLN*RQLFNGKSPRQ
Trigger: CTGTCTTGGGCTTTTCCCATTGAAGAGTTGCCTCCAGTTCAGTTGGAGTAACTCTAATTGGCTAGAGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS CAA 90 bp TCAGGTACGTCATGGTACTGTCTCCTGGCTTCTGTCGAAGTGATTTaGAAGCTTCTAGGGTATATTCAAAGTTGTTCCCAGAAACACTGT +
Preference number: 6 (lower is better)
Translates to: SGTSWYCLLASVEVI*KLLGYIQSCSQKHC
Trigger: ACAGTGTTTCTGGGAACAACTTTGAATATACCCTAGAAGCTTCAAAATCACTTCGACAGAAGCCAGGAGACAGTACCATGACGTACCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS CAA 72 bp TCATGGTACTGTCTCCTGGCTTCTGTCGAAGTGATTTaGAAGCTTCTAGGGTATATTCAAAGTTGTTCCCAG +
Preference number: 6 (lower is better)
Translates to: SWYCLLASVEVI*KLLGYIQSCSQ
Trigger: CTGGGAACAACTTTGAATATACCCTAGAAGCTTCAAAATCACTTCGACAGAAGCCAGGAGACAGTACCATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324907.14
ENST00000472167.5
ENST00000494520.1
ENST00000497403.5
CDS CAA 72 bp TCATGGTACTGTCTCCTGGCTTCTGTCGAAGTGATTTaGAAGCTTCTAGGGTATATTCAAAGTTGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: SWYCLLASVEVI*KLLGYIQSCSS
Trigger: GGAGGAACAACTTTGAATATACCCTAGAAGCTTCAAAATCACTTCGACAGAAGCCAGGAGACAGTACCATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405379.6
ENST00000464418.5
CDS CAA 72 bp CCGGGCCTGGCTTTCTCTTTCACCCAAGAAAACCTATaGTTACATTGCATCAGTAGACACATCTGCTTTTTA +
Preference number: 6 (lower is better)
Translates to: PGLAFSFTQENL*LHCISRHICFL
Trigger: TAAAAAGCAGATGTGTCTACTGATGCAATGTAACAATAGGTTTTCTTGGGTGAAAGAGAAAGCCAGGCCCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS GCA 72 bp AAACAATTACTGTGTTTTACTAGAAACCTGAAGCTATaGGATCTGATCAACTGGGGTTACAGCATAGACGCC +
Preference number: 6 (lower is better)
Translates to: KQLLCFTRNLKL*DLINWGYSIDA
Trigger: GGCGTCTATGCTGTAACCCCAGTTGATCAGATCGCATAGCTTCAGGTTTCTAGTAAAACACAGTAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS CAA 90 bp CCTATCTCTTTCACTAGTGGTTGTTCATTTAAACAAACTCCCATTTaGCTGTTACAGAAACGTGGCATTTCCCCCTGCACTCTTTATGCT +
Preference number: 6 (lower is better)
Translates to: PISFTSGCSFKQTPI*LLQKRGISPCTLYA
Trigger: AGCATAAAGAGTGCAGGGGGAAATGCCACGTTTCTGTAACAGCAAAATGGGAGTTTGTTTAAATGAACAACCACTAGTGAAAGAGATAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS TCA 72 bp TATTTAAGAGCCTTTCTCAAAGCCACTCCAACAGTTTaGTGGGCATTGTTTCATTACTCCTTACACCTCCTT +
Preference number: 6 (lower is better)
Translates to: YLRAFLKATPTV*WALFHYSLHLL
Trigger: AAGGAGGTGTAAGGAGTAATGAAACAATGCCCATCAAACTGTTGGAGTGGCTTTGAGAAAGGCTCTTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS CAA 72 bp ATATTTAAGAGCCTTTCTCAAAGCCACTCCAACAGTTaGATGGGCATTGTTTCATTACTCCTTACACCTCCT +
Preference number: 6 (lower is better)
Translates to: IFKSLSQSHSNS*MGIVSLLLTPP
Trigger: AGGAGGTGTAAGGAGTAATGAAACAATGCCCATCAAACTGTTGGAGTGGCTTTGAGAAAGGCTCTTAAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS CAA 90 bp AAAGTTGAAGAAGAGGGAAGAACAAATCAAACAAGAGGAATTGTGTaGATAACTGTTGAGGCTGGTCATGGATACATGTGGGCTTATACT +
Preference number: 6 (lower is better)
Translates to: KVEEEGRTNQTRGIV*ITVEAGHGYMWAYT
Trigger: AGTATAAGCCCACATGTATCCATGACCAGCCTCAACAGTTATCAACACAATTCCTCTTGTTTGATTTGTTCTTCCCTCTTCTTCAACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS TCA 72 bp AACAAATCAAACAAGAGGAATTGTGTTGATAACTGTTaGGGCTGGTCATGGATACATGTGGGCTTATACTGT +
Preference number: 6 (lower is better)
Translates to: NKSNKRNCVDNC*GWSWIHVGLYC
Trigger: ACAGTATAAGCCCACATGTATCCATGACCAGCCTCAACAGTTATCAACACAATTCCTCTTGTTTGATTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497403.5
CDS TCA 72 bp CTAAGTAGAAGAAAGTACACTACCAAATCCTATCTGTaGACACAACTACGCTACATAAAATTTGCATACACA +
Preference number: 6 (lower is better)
Translates to: LSRRKYTTKSYL*TQLRYIKFAYT
Trigger: TGTGTATGCAAATTTTATGTAGCGTAGTTGTGTTCACAGATAGGATTTGGTAGTGTACTTTCTTCTACTTAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497403.5