RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GREB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000196208

Ensembl transcript IDs: ENST00000234142.9, ENST00000263834.9, ENST00000381483.6, ENST00000381486.7, ENST00000389825.7, ENST00000396123.2, ENST00000432985.1, ENST00000470980.1, ENST00000472040.1, ENST00000628795.2

Found 1199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCCACTaGGGAGTCTTCCTGGCTCCCAGGACCACGGCCTCGGGGGCCCAT +
Preference number: 1 (lower is better)
Translates to: GWPRTWESQVFILTH*GVFLAPRTTASGAH
Trigger: ATGGGCCCCCGAGGCCGTGGTCCTGGGAGCCAGGAAGACTCCGCAGTGGGTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR CCA 90 bp CTTGGGAGTCTCAAGTTTTCATTCTCACCCACTGCGGAGTCTTCCTaGCTCCCAGGACCACGGCCTCGGGGGCCCATGTGTACTAGGAGG +
Preference number: 1 (lower is better)
Translates to: LGSLKFSFSPTAESS*LPGPRPRGPMCTRR
Trigger: CCTCCTAGTACACATGGGCCCCCGAGGCCGTGGTCCTGGGAGCCAGGAAGACTCCGCAGTGGGTGAGAATGAAAACTTGAGACTCCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR GCA 90 bp GTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTTaGTGGTGCCACCCAGGGCTTCTGATGCAGAAGTGGGGCCTGATT +
Preference number: 1 (lower is better)
Translates to: VTFSKTLLLKGLPNT*WCHPGLLMQKWGLI
Trigger: AATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR CCA 90 bp TTGCCAAACACTTGCTGGTGCCACCCAGGGCTTCTGATGCAGAAGTaGGGCCTGATTCTGATTCCAGGATGGGTCCATGAATTCACGCCT +
Preference number: 1 (lower is better)
Translates to: LPNTCWCHPGLLMQK*GLILIPGWVHEFTP
Trigger: AGGCGTGAATTCATGGACCCATCCTGGAATCAGAATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR CCA 90 bp ACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTaGTGCCACCCAGGGCTTCTGATGCAGAAGTGGGGCCTGATTCTG +
Preference number: 1 (lower is better)
Translates to: TFSKTLLLKGLPNTC*CHPGLLMQKWGLIL
Trigger: CAGAATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR CCA 90 bp TTATATGCAGATGTCCTGCTGGGCTCGGGGAGTAAAGCTGGTGCCTaGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTT +
Preference number: 1 (lower is better)
Translates to: LYADVLLGSGSKAGA*GTGHVLKDTASQGL
Trigger: AAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCAGGCACCAGCTTTACTCCCCGAGCCCAGCAGGACATCTGCATATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR CCA 90 bp AACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTaGCCTCTCAACTGTGGCTTTAAAAACCATTCTGGGGCAGGCACG +
Preference number: 1 (lower is better)
Translates to: NKMNKMITVQAPGNG*PLNCGFKNHSGAGT
Trigger: CGTGCCTGCCCCAGAATGGTTTTTAAAGCCACAGTTGAGAGGCCACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR GCA 90 bp TTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTaGCACCCAGGGCTTCTGATGCAGAAGTGGGGCCTGATTCTGATT +
Preference number: 1 (lower is better)
Translates to: FSKTLLLKGLPNTCW*HPGLLMQKWGLILI
Trigger: AATCAGAATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR TCA 90 bp TGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTaGACTGTGCTTCTAGCTCTTTCCAGCAGTGAGAACTTGGAAAGG +
Preference number: 1 (lower is better)
Translates to: WEKGDLDCRVQKPEL*TVLLALSSSENLER
Trigger: CCTTTCCAAGTTCTCACTGCTGGAAAGAGCTAGAAGCACAGTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR CCA 90 bp AAATGGGCTTTAAAACAGCCCAGAGCAATGGGCTGGCCCAGAACTTaGGAGTCTCAAGTTTTCATTCTCACCCACTGCGGAGTCTTCCTG +
Preference number: 1 (lower is better)
Translates to: KWALKQPRAMGWPRT*ESQVFILTHCGVFL
Trigger: CAGGAAGACTCCGCAGTGGGTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGCTGTTTTAAAGCCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR TCA 90 bp TACAGAACCAGCTACTACATATCATCAGATTGCTTCCCAAGAGCCTaGATGCGTCAGTTTACCACGCGAACGGTGCATCGGACAAGCGCT +
Preference number: 1 (lower is better)
Translates to: YRTSYYISSDCFPRA*MRQFTTRTVHRTSA
Trigger: AGCGCTTGTCCGATGCACCGTTCGCGTGGTAAACTGACGCATTCAGGCTCTTGGGAAGCAATCTGATGATATGTAGTAGCTGGTTCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
3UTR CCA 90 bp TTGTTCCTCGTGAAATGGGCTTTAAAACAGCCCAGAGCAATGGGCTaGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCCACTGC +
Preference number: 1 (lower is better)
Translates to: LFLVKWALKQPRAMG*PRTWESQVFILTHC
Trigger: GCAGTGGGTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGCTGTTTTAAAGCCCATTTCACGAGGAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR CCA 90 bp TGCCCAGCCCATCAGAAGATTCATTCTGAGGACAGCCCTCAGAGGTaGAATTGCCCAGGTCGGGTTCAAATATCTTTCCACCATTCTTTA +
Preference number: 1 (lower is better)
Translates to: CPAHQKIHSEDSPQR*NCPGRVQISFHHSL
Trigger: TAAAGAATGGTGGAAAGATATTTGAACCCGACCTGGGCAATTCCACCTCTGAGGGCTGTCCTCAGAATGAATCTTCTGATGGGCTGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR GCA 90 bp GCCCATCAGAAGATTCATTCTGAGGACAGCCCTCAGAGGTGGAATTaGCCAGGTCGGGTTCAAATATCTTTCCACCATTCTTTACCTACA +
Preference number: 1 (lower is better)
Translates to: AHQKIHSEDSPQRWN*PGRVQISFHHSLPT
Trigger: TGTAGGTAAAGAATGGTGGAAAGATATTTGAACCCGACCTGGGCAATTCCACCTCTGAGGGCTGTCCTCAGAATGAATCTTCTGATGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR TCA 90 bp CCAGAAGCCAGAACTTTGAACTGTGCTTCTAGCTCTTTCCAGCAGTaGGAACTTGGAAAGGTAGACTCTTTGCATCTCAACCTTCTCATC +
Preference number: 1 (lower is better)
Translates to: PEARTLNCASSSFQQ*ELGKVDSLHLNLLI
Trigger: GATGAGAAGGTTGAGATGCAAAGAGTCTACCTTTCCAAGTTCTCACTGCTGGAAAGAGCTAGAAGCACAGTTCAAAGTTCTGGCTTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR CCA 90 bp GTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGAAATACTaGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGAGAA +
Preference number: 1 (lower is better)
Translates to: VTGEPTWLKSHLLKY*HRYKITQDSLELRE
Trigger: TTCTCTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR-3UTR TCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGAGGCAGGAGAATGGTaGGAACCCGGGAGGCGGAGC +
Preference number: 2 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVEAGEW*EPGRRS
Trigger: GCTCCGCCTCCCGGGTTCTCACCATTCTCCTGCCTC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGACTGCGGAGTCTTCCTaGCTCCCAGGACCACGGCCT +
Preference number: 2 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVTAESS*LPGPRP
Trigger: AGGCCGTGGTCCTGGGAGCCAGGAAGACTCCGCAGT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACTGTACTAGGAGGGGCTaGACCTGGACAGTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNCTRRG*TWTVPG
Trigger: CCCAGGGACTGTCCAGGTGCAGCCCCTCCTAGTACA...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR CAA 90 bp GGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTaGCTGGTGCCACCCAGGGCTTCTGATGCAGAAGTGGGGCCTGAT +
Preference number: 2 (lower is better)
Translates to: GHVLKDTASQGLAKH*LVPPRASDAEVGPD
Trigger: ATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACCACCTGGACAGTCCCTaGGGTCCATTCCAGTCAAAC +
Preference number: 2 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNHLDSP*GPFQSN
Trigger: GTTTGACTGGAATGGACCCCAGGGACTGTCCAGGTG...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCACCTGGACAGTCCCTaGGGTCCATTCCAGTCAAAC +
Preference number: 2 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSHLDSP*GPFQSN
Trigger: GTTTGACTGGAATGGACCCCAGGGACTGTCCAGGTG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTACTGCGGAGTCTTCCTaGCTCCCAGGACCACGGCCT +
Preference number: 2 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTTAESS*LPGPRP
Trigger: AGGCCGTGGTCCTGGGAGCCAGGAAGACTCCGCAGT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR CAA 90 bp GAAATGGGCTTTAAAACAGCCCAGAGCAATGGGCTGGCCCAGAACTaGGGAGTCTCAAGTTTTCATTCTCACCCACTGCGGAGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: EMGFKTAQSNGLAQN*GVSSFHSHPLRSLP
Trigger: AGGAAGACTCCGCAGTGGGTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGCTGTTTTAAAGCCCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR-3UTR TCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCTTTGGGCTAGCCTCTaGAACAGCAAACTTATAGGC +
Preference number: 2 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVLWASL*NSKLIG
Trigger: GCCTATAAGTTTGCTGTTTCAGAGGCTAGCCCAAAG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR-3UTR GCA 90 bp ATTGCTCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTCCACAGGTGTCTCACTaGTCCTTGGCACATACGGTA +
Preference number: 2 (lower is better)
Translates to: IAPKFYHPPAVQPIGQVTPQVSH*SLAHTV
Trigger: TACCGTATGTGCCAAGGAGCAGTGAGACACCTGTGG...AGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGGAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
3UTR-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACAATCAGGTTTGTCCATaGAAGCACACGAATGGCAGG +
Preference number: 2 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNNQVCP*KHTNGR
Trigger: CCTGCCATTCGTGTGCTTCCATGGACAAACCTGATT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACACAGGGGAACCTACTTaGCTGAAATCCCATCTACTG +
Preference number: 2 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNTGEPT*LKSHLL
Trigger: CAGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAATCAGGTTTGTCCATaGAAGCACACGAATGGCAGG +
Preference number: 2 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSNQVCP*KHTNGR
Trigger: CCTGCCATTCGTGTGCTTCCATGGACAAACCTGATT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR CAA 90 bp GTTTGTCCATGGAAGCACACGAATGGCAGGACAGGAAGTAAATCTTaGTTCCTCGTGAAATGGGCTTTAAAACAGCCCAGAGCAATGGGC +
Preference number: 2 (lower is better)
Translates to: VCPWKHTNGRTGSKS*FLVKWALKQPRAMG
Trigger: GCCCATTGCTCTGGGCTGTTTTAAAGCCCATTTCACGAGGAACAAAGATTTACTTCCTGTCCTGCCATTCGTGTGCTTCCATGGACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGTTCCTTTGGAATATTaGTTTGTAGGAGGTTACAGG +
Preference number: 2 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNVPLEY*FVGGYR
Trigger: CCTGTAACCTCCTACAAAGCAATATTCCAAAGGAAC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGTGTACTAGGAGGGGCTaGACCTGGACAGTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: STEILAPLQNNPRFFRTKCTRRG*TWTVPG
Trigger: CCCAGGGACTGTCCAGGTGCAGCCCCTCCTAGTACA...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR CAA 90 bp TTCTCAAAGGTGGATTTACAGAACCAGCTACTACATATCATCAGATaGCTTCCCAAGAGCCTGAATGCGTCAGTTTACCACGCGAACGGT +
Preference number: 2 (lower is better)
Translates to: FSKVDLQNQLLHIIR*LPKSLNASVYHANG
Trigger: ACCGTTCGCGTGGTAAACTGACGCATTCAGGCTCTTGGGAAGCAATCTGATGATATGTAGTAGCTGGTTCTGTAAATCCACCTTTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTAGTCACCAAAAATATCCAAACACTTGCTGGTaGCACCCAGGGCTTCTGATG +
Preference number: 2 (lower is better)
Translates to: CVCVLSCTPGTPFSHQKYPNTCW*HPGLLM
Trigger: CATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGG...ATATTTTTGGTGACTAAATGGAGTACCTGGAGTACAAGATAACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTAGTCACCAAAAATATAGTAAAGCTGGTGCCTaGGGCACAGGTCACGTTCTC +
Preference number: 2 (lower is better)
Translates to: CVCVLSCTPGTPFSHQKYSKAGA*GTGHVL
Trigger: GAGAACGTGACCTGTGCCCCAGGCACCAGCTTTACT...ATATTTTTGGTGACTAAATGGAGTACCTGGAGTACAAGATAACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR CAA 90 bp GTTCCTTTGGAATATTGCTTTGTAGGAGGTTACAGGGGAACCTACTaGGCTGAAATCCCATCTACTGAAATACTGGCACCGCTACAAAAT +
Preference number: 2 (lower is better)
Translates to: VPLEYCFVGGYRGTY*AEIPSTEILAPLQN
Trigger: ATTTTGTAGCGGTGCCAGTATTTCAGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATATTCCAAAGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTAGTCACCAAAAATATTATATGCAGATGTCCTaGTGGGCTCGGGGAGTAAAG +
Preference number: 2 (lower is better)
Translates to: CVCVLSCTPGTPFSHQKYYMQMS*WARGVK
Trigger: CTTTACTCCCCGAGCCCAGCAGGACATCTGCATATA...ATATTTTTGGTGACTAAATGGAGTACCTGGAGTACAAGATAACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGGCTGGCCCAGAACTTaGGAGTCTCAAGTTTTCATT +
Preference number: 2 (lower is better)
Translates to: STEILAPLQNNPRFFRTKGWPRT*ESQVFI
Trigger: AATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGAATCAGGTTTGTCCATaGAAGCACACGAATGGCAGG +
Preference number: 2 (lower is better)
Translates to: STEILAPLQNNPRFFRTKNQVCP*KHTNGR
Trigger: CCTGCCATTCGTGTGCTTCCATGGACAAACCTGATT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR CAA 90 bp TTCTTCCAAATATTCACCTTTATAAATCCCTCTGCAATGCACATCTaGACATATAGAACGTTACTTCCTTCGCCTAAATTCTCAAAGGTG +
Preference number: 2 (lower is better)
Translates to: FFQIFTFINPSAMHI*TYRTLLPSPKFSKV
Trigger: CACCTTTGAGAATTTAGGCGAAGGAAGTAACGTTCTATATGTCAAGATGTGCATTGCAGAGGGATTTATAAAGGTGAATATTTGGAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
3UTR CCA 72 bp CTCAAGTTTTCATTCTCACCCACTGCGGAGTCTTCCTaGCTCCCAGGACCACGGCCTCGGGGGCCCATGTGT +
Preference number: 3 (lower is better)
Translates to: LKFSFSPTAESS*LPGPRPRGPMC
Trigger: ACACATGGGCCCCCGAGGCCGTGGTCCTGGGAGCCAGGAAGACTCCGCAGTGGGTGAGAATGAAAACTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR CCA 72 bp GATGTCCTGCTGGGCTCGGGGAGTAAAGCTGGTGCCTaGGGCACAGGTCACGTTCTCAAAGACACTGCTTCT +
Preference number: 3 (lower is better)
Translates to: DVLLGSGSKAGA*GTGHVLKDTAS
Trigger: AGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCAGGCACCAGCTTTACTCCCCGAGCCCAGCAGGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR GCA 72 bp TGGTGCCTGGGGCACAGGTCACGTTCTCAAAGACACTaGTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCC +
Preference number: 3 (lower is better)
Translates to: WCLGHRSRSQRH*FSRACQTLAGA
Trigger: GGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCAGGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR CCA 72 bp AAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTaGTGCCACCCAGGGCTTCTGATGCAGAAGTGGGGC +
Preference number: 3 (lower is better)
Translates to: KTLLLKGLPNTC*CHPGLLMQKWG
Trigger: GCCCCACTTCTGCATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR CCA 72 bp ACTTGCTGGTGCCACCCAGGGCTTCTGATGCAGAAGTaGGGCCTGATTCTGATTCCAGGATGGGTCCATGAA +
Preference number: 3 (lower is better)
Translates to: TCWCHPGLLMQK*GLILIPGWVHE
Trigger: TTCATGGACCCATCCTGGAATCAGAATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCACCAGCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR GCA 72 bp TCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTTaGTGGTGCCACCCAGGGCTTCTGATGCAGAAGTGG +
Preference number: 3 (lower is better)
Translates to: SKTLLLKGLPNT*WCHPGLLMQKW
Trigger: CCACTTCTGCATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR GCA 72 bp AGGACAGGTCACTCGCCATTACCACAGGTGTCTCACTaGTCCTTGGCACATACGGTAACTCCCAAGTGTCAC +
Preference number: 3 (lower is better)
Translates to: RTGHSPLPQVSH*SLAHTVTPKCH
Trigger: GTGACACTTGGGAGTTACCGTATGTGCCAAGGAGCAGTGAGACACCTGTGGTAATGGCGAGTGACCTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389825.7
3UTR CCA 72 bp TATCAAATCCTCTCGGGGCTGCTGAGCTCCCAAAGGTaGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: YQILSGLLSSQR*RVCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACACACGCCACCTTTGGGAGCTCAGCAGCCCCGAGAGGATTTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGGGCTGGCCCAGAACTaGGGAGTCTCAAGTTTTCAT +
Preference number: 3 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVGLAQN*GVSSFH
Trigger: ATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR-3UTR CAA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGGGCTGGCCCAGAACTaGGGAGTCTCAAGTTTTCAT +
Preference number: 3 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNGLAQN*GVSSFH
Trigger: ATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR-3UTR CAA 90 bp CCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCAGCTGTGGTGTCTCACTGCTCCTaGGCACATACGGTAACTCCC +
Preference number: 3 (lower is better)
Translates to: PNNTLPTIAPKFYHPPAVVSHCS*AHTVTP
Trigger: GGGAGTTACCGTATGTGCCAAGGAGCAGTGAGACAC...CACAGCTGGAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
3UTR-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTTACAGGGGAACCTACTaGGCTGAAATCCCATCTACT +
Preference number: 3 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSYRGTY*AEIPST
Trigger: AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTA...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR TCA 72 bp AGCTACTACATATCATCAGATTGCTTCCCAAGAGCCTaGATGCGTCAGTTTACCACGCGAACGGTGCATCGG +
Preference number: 3 (lower is better)
Translates to: SYYISSDCFPRA*MRQFTTRTVHR
Trigger: CCGATGCACCGTTCGCGTGGTAAACTGACGCATTCAGGCTCTTGGGAAGCAATCTGATGATATGTAGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
3UTR-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGAGCTTCTTTGCATTTTaGCCCTTTCTAAGAGGTAGG +
Preference number: 3 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVSFFAF*PFLRGR
Trigger: CCTACCTCTTAGAAAGGGCAAAAATGCAAAGAAGCT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR CCA 72 bp GTGAAATGGGCTTTAAAACAGCCCAGAGCAATGGGCTaGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTC +
Preference number: 3 (lower is better)
Translates to: VKWALKQPRAMG*PRTWESQVFIL
Trigger: GAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGCTGTTTTAAAGCCCATTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTTGTTCCTTTGGAATATaGCTTTGTAGGAGGTTACAG +
Preference number: 3 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSCSFGI*LCRRLQ
Trigger: CTGTAACCTCCTACAAAGCAATATTCCAAAGGAACA...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR GCA 72 bp AAGATTCATTCTGAGGACAGCCCTCAGAGGTGGAATTaGCCAGGTCGGGTTCAAATATCTTTCCACCATTCT +
Preference number: 3 (lower is better)
Translates to: KIHSEDSPQRWN*PGRVQISFHHS
Trigger: AGAATGGTGGAAAGATATTTGAACCCGACCTGGGCAATTCCACCTCTGAGGGCTGTCCTCAGAATGAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
3UTR CCA 72 bp CGGACAAGCGCTGGTTTTACCGCACCTAAGCACCACTaGGTACCATCATTTGGGTTATTAATTCAGAAAAAG +
Preference number: 3 (lower is better)
Translates to: RTSAGFTAPKHH*VPSFGLLIQKK
Trigger: CTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGCGGTAAAACCAGCGCTTGTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381483.6
3UTR TCA 72 bp AGAACTTTGAACTGTGCTTCTAGCTCTTTCCAGCAGTaGGAACTTGGAAAGGTAGACTCTTTGCATCTCAAC +
Preference number: 3 (lower is better)
Translates to: RTLNCASSSFQQ*ELGKVDSLHLN
Trigger: GTTGAGATGCAAAGAGTCTACCTTTCCAAGTTCTCACTGCTGGAAAGAGCTAGAAGCACAGTTCAAAGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR CCA 72 bp GAACCTACTTGGCTGAAATCCCATCTACTGAAATACTaGCACCGCTACAAAATAACCCAAGATTCTTTAGAA +
Preference number: 3 (lower is better)
Translates to: EPTWLKSHLLKY*HRYKITQDSLE
Trigger: TTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGATGGGATTTCAGCCAAGTAGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR-3UTR CAA 90 bp ATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCATGACCCTACTACATATCATCAGATaGCTTCCCAAGAGCCTGAAT +
Preference number: 3 (lower is better)
Translates to: MIVSINFGSCILSLTMTLLHIIR*LPKSLN
Trigger: ATTCAGGCTCTTGGGAAGCAATCTGATGATATGTAG...TAGGGTCATGGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
3UTR TCA 72 bp TCTTTGCATCTCAACCTTCTCATCTTTCAAAGGGGATaGATAATTCCAATCACACAAGAAAGGACTGAACAA +
Preference number: 3 (lower is better)
Translates to: SLHLNLLIFQRG*IIPITQERTEQ
Trigger: TTGTTCAGTCCTTTCTTGTGTGATTGGAATTATTCATCCCCTTTGAAAGATGAGAAGGTTGAGATGCAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR GCA 72 bp ATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTaGATTCTTTCCTTAACCATGACCCTATCATCAGTT +
Preference number: 3 (lower is better)
Translates to: IAAMIVSINFGS*ILSLTMTLSSV
Trigger: AACTGATGATAGGGTCATGGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
3UTR CCA 72 bp CTTACAAATAGCTGCAATGATTGTCAGTATAAACTTTaGGTCTTGCATTCTTTCCTTAACCATGACCCTATC +
Preference number: 3 (lower is better)
Translates to: LTNSCNDCQYKL*VLHSFLNHDPI
Trigger: GATAGGGTCATGGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTATTTGTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCCGATGCAGGAGTCGATaGCCGCGCTGCGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPRCRSR*PRCGRR
Trigger: GCGCCTGCCGCAGCGCGGCCATCGACTCCTGCATCG...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAGCAGCCTGCGGGGGTaGAAGCCGTCCACGCGGCCC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSSSLRG*KPSTRP
Trigger: GGGCCGCGTGGACGGCTTCCACCCCCGCAGGCTGCT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCGGGACTGTGCCTGCTaGTGGCCGAGGGTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSRDCAC*WPRVAP
Trigger: AGGGGCCACCCTCGGCCATCAGCAGGCACAGTCCCG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGAGCACTGGGAGGCCTaGAGGACCCACGTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPEHWEA*RTHVPA
Trigger: TGCCGGCACGTGGGTCCTGCAGGCCTCCCAGTGCTC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAGGCTACAGTCGGGCTaGGGCGTCGGCCCGGGACTG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSRLQSG*GVGPGL
Trigger: CAGTCCCGGGCCGACGCCCCAGCCCGACTGTAGCCT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGGGGCACAGATGTACTaGGCCGGCACGACCGCGGCA +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPGAQMY*AGTTAA
Trigger: TGCCGCGGTCGTGCCGGCCCAGTACATCTGTGCCCC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCCCCACGGTGACGCCTaGGCTGGGACTGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSPHGDA*AGTAQD
Trigger: ATCCTGGGCAGTCCCAGCTCAGGCGTCACCGTGGGG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTCCTCTGGCCGGTCCTaGGGCTACAGTCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSSSGRS*GYSRAG
Trigger: CCCAGCCCGACTGTAGCCTCAGGACCGGCCAGAGGA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGAGGCAGGAGAATGGTaGGAACCCGGGAGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPEAGEW*EPGRRS
Trigger: GCTCCGCCTCCCGGGTTCTCACCATTCTCCTGCCTC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCCTCTCCCTGGGGGAGTaGTGTGGGCTGAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPLSLGE*CGLSRG
Trigger: TCCTCGGCTCAGCCCACAGCACTCCCCCAGGGAGAG...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCTGGGGCGACCTGGCATaGTCTCCCTGGGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPWGDLA*SPWGSA
Trigger: AGCACTCCCCCAGGGAGAGCATGCCAGGTCGCCCCA...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGTCGGCCCGGGACTGTaGCTGCTGATGGCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSVGPGL*LLMAEG
Trigger: ACCCTCGGCCATCAGCAGGCACAGTCCCGGGCCGAC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGGCCCTCGGCCCGGTTaGCGTAGTCCATGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSGPRPG*RSPCGW
Trigger: CCAGCCACATGGACTACGGCAACCGGGCCGAGGGCC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGAGCTGGGCGGGCGCTaGGAGGAACGTGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPELGGR*EERVLA
Trigger: AGCAAGCACACGTTCCTCGCAGCGCCCGCCCAGCTC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCTCGCGCAGCCGGAACTaGCACTCGTCCTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPSRSRN*HSSSSS
Trigger: GGAGCTCGAGGACGAGTGGCAGTTCCGGCTGCGCGA...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTGTCGTTGCAGGAGCTaGCGGCCAGGCTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSCRCRS*RPGWPA
Trigger: GGCTGGCCAGCCTGGCCGCCAGCTCCTGCAACGACA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGAGGTGACCGACACCTaGACGCTCCTCTGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPEVTDT*TLLWPV
Trigger: GACCGGCCAGAGGAGCGTCCAGGTGTCGGTCACCTC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGGAGGGAGGCGGCCTTaGGCAGGCCACTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSGGRRP*AGHCCQ
Trigger: CTGACAGCAGTGGCCTGCCCAAGGCCGCCTCCCTCC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCTGGCCCGGGTCTTGCTaGACCACTTCCGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPWPGSC*TTSAGP
Trigger: TGGGCCTGCGGAAGTGGTCCAGCAAGACCCGGGCCA...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGCTCTTGCACCTCGCTaGCCCGGGTCTTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPALAPR*PGSCWT
Trigger: GGTCCAGCAAGACCCGGGCCAGCGAGGTGCAAGAGC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAGGCGGACGACCGTCTaGCGCAGTGAGCTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSRRTTV*RSELRS
Trigger: GGACCGGAGCTCACTGCGCCAGACGGTCGTCCGCCT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCCCAGGCGCCGGGCAATaGGTGGCCTCTCAACTGTGG +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPPGAGQ*VASQLW
Trigger: CCACAGTTGAGAGGCCACCCATTGCCCGGCGCCTGG...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAAGAGCTGGCCCACATaGCCGAGGGGGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSKSWPT*PRGRAG
Trigger: TCCTGCCCTCCCCCTCGGTCATGTGGGCCAGCTCTT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCTGGGGAAGGCAGCCGTaGTCTCCAGGGCTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPWGRQP*SPGLGR
Trigger: TCTTCCCAGCCCTGGAGAGCACGGCTGCCTTCCCCA...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTGGCCGCAGGGGCACTaGTTCGGGGAGTTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSWPQGH*FGELRR
Trigger: CCTCCTCAACTCCCCGAAGCAGTGCCCCTGCGGCCA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGCTGCGAGGAACGTGTaGTTGCTGTCCGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPAARNV*LLSGAQ
Trigger: CTGTGCCCCGGACAGCAAGCACACGTTCCTCGCAGC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTCGCGCAGCCGGAACTaGCACTCGTCCTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSSRSRN*HSSSSS
Trigger: GGAGCTCGAGGACGAGTGGCAGTTCCGGCTGCGCGA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAGGACCATGAGCCCGTaGCCGCAGGGGCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSRTMSP*PQGHCF
Trigger: GAAGCAGTGCCCCTGCGGCCACGGGCTCATGGTCCT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCGTAGTCCATGTGGCTaGGCCGGGGCACCGTCCACT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSRSPCG*AGAPST
Trigger: AGTGGACGGTGCCCCGGCCCAGCCACATGGACTACG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCAGATGTCCTGCGGCTTaGTTCCCAGCTCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPRCPAA*FPAPPA
Trigger: GGCAGGAGGAGCTGGGAATCAAGCCGCAGGACATCT...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCCCACCAAGCCAACCTaGGGCACGCAGGACATGCCT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSPTKPT*GTQDMP
Trigger: AGGCATGTCCTGCGTGCCGCAGGTTGGCTTGGTGGG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGAGCTTCTGCGCTACTaGCAGCTGGAAGGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPELLRY*QLEGPD
Trigger: ATCCGGCCCTTCCAGCTGGCAGTAGCGCAGAAGCTC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAGGAGGCCGGCGCTGTaGACCCGCAGGTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSRRPAL*TRRLKS
Trigger: AGACTTCAACCTGCGGGTGCACAGCGCCGGCCTCCT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGCTGCGAGGAACGTGTaGTTGCTGTCCGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSAARNV*LLSGAQ
Trigger: CTGTGCCCCGGACAGCAAGCACACGTTCCTCGCAGC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCTGTACTAGGAGGGGCTaGACCTGGACAGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPCTRRG*TWTVPG
Trigger: CCCAGGGACTGTCCAGGTGCAGCCCCTCCTAGTACA...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGCATCTCCTCGGAGATaGGCTGGATGGCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSASPRR*AGWQRR
Trigger: GCGCCTCTGCCATCCAGCCCATCTCCGAGGAGATGC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGAGGATGCTGAGTCGTaGGAGCGGGACCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPEDAES*ERDLSL
Trigger: AAGGGAGAGGTCCCGCTCCCACGACTCAGCATCCTC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCACCTGGACGCTCCTCTaGCCGGTCCTGAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSTWTLL*PVLRLQ
Trigger: CTGTAGCCTCAGGACCGGCCAGAGGAGCGTCCAGGT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGCGGCCGGTCTTCCCTaGCATTGGCGGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSAAGLP*HWRSGT
Trigger: AGTTCCAGACCGCCAATGCCAGGGAAGACCGGCCGC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCCACTGGAAAGGTGACTaGAGCTGGTCCCACCAAGCC +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPHWKGD*SWSHQA
Trigger: GGCTTGGTGGGACCAGCTTCAGTCACCTTTCCAGTG...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp TGGTGCCTGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCTGGCTCGGGTCTGCCTaGCACCCAGGCTTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: WCLGHRSRSQRHCFSRACWLGSA*HPGFLA
Trigger: GGCCAGGAAGCCTGGGTGTCAGGCAGACCCGAGCCA...GCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCAGGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGCAGAGGCGCCGTACTaGTCGTATGCCCGTGAGACA +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSAEAPY*SYARET
Trigger: TGTCTCACGGGCATACGAGCAGTACGGCGCCTCTGC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGCTGGAAGGGCCGGATaGTGTGTGGCTCCAGATTGT +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPAGRAG*CVAPDC
Trigger: ACAATCTGGAGCCACACAGCATCCGGCCCTTCCAGC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGGCAAGGACTCCCCATaGGGGTCCATCCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSGKDSP*GSIPLK
Trigger: CTTCAGTGGGATGGACCCGCATGGGGAGTCCTTGCC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGTGGCTGTCCTCAGCTaGAGCTACTCCAGTCACCAC +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPVAVLS*SYSSHH
Trigger: GTGGTGACTGGAGTAGCTGCAGCTGAGGACAGCCAC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381486.7
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGGGAAAAGATGGGCCTaGGCACCAGGTTGTTGGACC +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPGKRWA*APGCWT
Trigger: GGTCCAACAACCTGGTGCCCAGGCCCATCTTTTCCC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCAGGTCCTTCCCGGCCTaGCAAAACCCGTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPRSFPA*QNPSVV
Trigger: TACCACAGACGGGTTTTGCCAGGCCGGGAAGGACCT...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTGCGCTACTGCCAGCTaGAAGGGCCGGATGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSCATAS*KGRMLC
Trigger: ACACAGCATCCGGCCCTTCCAGCTGGCAGTAGCGCA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGCGGGGCCACGGGGCTaGGGCGACCTGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNAGPRG*GDLACS
Trigger: AGAGCATGCCAGGTCGCCCCAGCCCCGTGGCCCCGC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTTGGTCAAGGAGCACTaGGAGGCCTGCAGGACCCAC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSLVKEH*EACRTH
Trigger: GTGGGTCCTGCAGGCCTCCCAGTGCTCCTTGACCAA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCAAGACAATGGGTGGCTaGCGGCAGGCCTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPKTMGG*RQALVK
Trigger: CTTGACCAAGGCCTGCCGCCAGCCACCCATTGTCTT...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCCAAGAAGACAATGGGTaGCTGGCGGCAGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPQEDNG*LAAGLG
Trigger: ACCAAGGCCTGCCGCCAGCCACCCATTGTCTTCTTG...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTGGGCAAGAAGACAATaGGTGGCTGGCGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSWARRQ*VAGGRP
Trigger: AGGCCTGCCGCCAGCCACCCATTGTCTTCTTGCCCA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGAGCAGCCTGCGGGGGTaGAAGCCGTCCACGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVSSLRG*KPSTRP
Trigger: GGGCCGCGTGGACGGCTTCCACCCCCGCAGGCTGCT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGAACAGCTCCAGGTCTaGCCAGGGGTCGCTAAGCTG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSEQLQV*PGVAKL
Trigger: CAGCTTAGCGACCCCTGGCCAGACCTGGAGCTGTTC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCACCAGCACGTGCAAATaGCTGGCACCGTCCATTGCG +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPTSTCK*LAPSIA
Trigger: CGCAATGGACGGTGCCAGCCATTTGCACGTGCTGGT...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCACCTTGGATGTGATGTaGAAGGACCTGTGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPTLDVM*KDLWPP
Trigger: GGGCGGCCACAGGTCCTTCCACATCACATCCAAGGT...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCAGCACTGGGTGGTCATaGTTCTTCAGGGACAGCGGG +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPSTGWS*FFRDSG
Trigger: CCCGCTGTCCCTGAAGAACCATGACCACCCAGTGCT...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGCGTTTAGTGAGGGGTaGTCAGAAGCTGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSAFSEG*SEAGPA
Trigger: GGCAGGACCAGCTTCTGATCACCCCTCACTAAACGC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCACTGGAAAGGTGACTaGAGCTGGTCCCACCAAGCC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSHWKGD*SWSHQA
Trigger: GGCTTGGTGGGACCAGCTTCAGTCACCTTTCCAGTG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCCACCACTGGAAAGGTaGCTGAAGCTGGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSPPLER*LKLVPP
Trigger: TGGTGGGACCAGCTTCAGTCACCTTTCCAGTGGTGG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCCTTGGTATTTTCCGGTaGCGGCGATGCAGGAGTCGA +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPLGIFR*RRCRSR
Trigger: TCGACTCCTGCATCGCCGTCACCGGAAAATACCAAG...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGGGAGTGCTGTGGGCTaGGCCGAGGACTCGCCACCG +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNGSAVG*AEDSPP
Trigger: CGGTGGCGAGTCCTCGGCTCAGCCCACAGCACTCCC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACCGGGACTGTGCCTGCTaGTGGCCGAGGGTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNRDCAC*WPRVAP
Trigger: AGGGGCCACCCTCGGCCATCAGCAGGCACAGTCCCG...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCGGGACTGTGCCTGCTaGTGGCCGAGGGTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVRDCAC*WPRVAP
Trigger: AGGGGCCACCCTCGGCCATCAGCAGGCACAGTCCCG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCCAGACACCTTGGATGTaGTGTGGAAGGACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPQTPWM*CGRTCG
Trigger: GCCACAGGTCCTTCCACATCACATCCAAGGTGTCTG...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAGCTACTCGGGAGGCTaGGGCAGGAGAATGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSSYSGG*GRRMVR
Trigger: TCTCACCATTCTCCTGCCTCAGCCTCCCGAGTAGCT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAGAGCGGCAAGCTGCTaGTCAGCTTCCAGGTACAGC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSRAASC*SASRYS
Trigger: GCTGTACCTGGAAGCTGAGCAGCAGCTTGCCGCTCT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGTACTGGCGGGGATCTaGCGGCTTCTAAACTCTGAG +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPVLAGI*RLLNSE
Trigger: CTCAGAGTTTAGAAGCCGGCAGATCCCCGCCAGTAC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCACGGTAAGCAGGAGCTaGATCTCCTCGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSTVSRS*ISSEMG
Trigger: GCCCATCTCCGAGGAGATGCAGCTCCTGCTTACCGT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGGCTGCGGCGGCGCCTaGTGGTACTGCCGGATCTCG +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVGCGGA*WYCRIS
Trigger: CGAGATCCGGCAGTACCAGCAGGCGCCGCCGCAGCC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGGCTGCGGCGGCGCCTaGTGGTACTGCCGGATCTCG +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNGCGGA*WYCRIS
Trigger: CGAGATCCGGCAGTACCAGCAGGCGCCGCCGCAGCC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGCACACTCGATGACGTaGACGCTGTCGTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSAHSMT*TLSLQE
Trigger: CTCCTGCAACGACAGCGTGCACGTCATCGAGTGTGC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTGGTCTTGGCAAGCTTaGCCTCGACCAACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSWSWQA*PRPTAG
Trigger: TCCGGCTGTTGGTCGAGGGCAAGCTTGCCAAGACCA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGAGTTGAGGAGGTTCTaGGTGATCTCCAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPELRRF*VISSVS
Trigger: GGAGACGCTGGAGATCACGCAGAACCTCCTCAACTC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAGGATGATCTCAAAGTaGTCCTCCAGCGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSRMISK*SSSASR
Trigger: CCGGCTGGCGCTGGAGGAGCACTTTGAGATCATCCT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCTTGACAACCAGCACGTaGAAATGGCTGGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPLTTST*KWLAPS
Trigger: GGACGGTGCCAGCCATTTGCACGTGCTGGTTGTCAA...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGGGGCCGCCTCGATGTaGTGCATGATGTGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPGAASM*CMMCFK
Trigger: TTTGAAGCACATCATGCAGCACATCGAGGCGGCCCC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCGAGGAACGTGTGCTTaGTGTCCGGGGCACAGATGT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSRGTCA*CPGHRC
Trigger: ACATCTGTGCCCCGGACAGCAAGCACACGTTCCTCG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCAAGAGGTGGCTGTGGTaGTGCAGGAACTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPKRWLW*CRNFSS
Trigger: GCTGGAGAAGTTCCTGCAGCACCACAGCCACCTCTT...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCCTGGGAAGAGGGAACTaGAACAAGTACTGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPLGRGN*NKYWRG
Trigger: TCCCCGCCAGTACTTGTTCCAGTTCCCTCTTCCCAG...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACCGATGCAGGAGTCGATaGCCGCGCTGCGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNRCRSR*PRCGRR
Trigger: GCGCCTGCCGCAGCGCGGCCATCGACTCCTGCATCG...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGAAGTGTCACAATGTTaGGGGCCTCCTTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPEVSQC*GPPSPP
Trigger: GGGAGGTGAAGGAGGCCCCCAACATTGTGACACTTC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGAGGCTACAGTCGGGCTaGGGCGTCGGCCCGGGACTG +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVRLQSG*GVGPGL
Trigger: CAGTCCCGGGCCGACGCCCCAGCCCGACTGTAGCCT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCTGTACGCTGCGTACTTaGACAGTCTCATCCGTGCCG +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPCTLRT*TVSSVP
Trigger: CGGCACGGATGAGACTGTCCAAGTACGCAGCGTACA...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCACCAGCACGTGCAAATaGCTGGCACCGTCCATTGCG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSTSTCK*LAPSIA
Trigger: CGCAATGGACGGTGCCAGCCATTTGCACGTGCTGGT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCATGAAGTTGTGCACGTaGCAGCGGGAGAAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPMKLCT*QREKGS
Trigger: AGAGCCCTTCTCCCGCTGCCACGTGCACAACTTCAT...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAGCACTGGGTGGTCATaGTTCTTCAGGGACAGCGGG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSSTGWS*FFRDSG
Trigger: CCCGCTGTCCCTGAAGAACCATGACCACCCAGTGCT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAACAGCCCAGAGCAATaGGCTGGCCCAGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSNSPEQ*AGPELG
Trigger: CCCAAGTTCTGGGCCAGCCCATTGCTCTGGGCTGTT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACGACACCCAGGCTTCCTaGCCCCTGCCCGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: WGTGHVLKDTASQGLAKHDTQAS*PLPGRE
Trigger: CTCCCTGCCGGGCAGGGGCCAGGAAGCCTGGGTGTC...GTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR TCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGGGAATCTTTGCCGTTaGAAACAGCCGGACCCATTG +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPGNLCR*KQPDPL
Trigger: CAATGGGTCCGGCTGTTTTCAACGGCAAAGATTCCC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTGTACAAGAGGGGGCTaGCCACGACGTCATTCAGGT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSCTRGG*PRRHSG
Trigger: ACCTGAATGACGTCGTGGTCAGCCCCCTCTTGTACA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCTTGGTATTTTCCGGTaGCGGCGATGCAGGAGTCGA +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSLGIFR*RRCRSR
Trigger: TCGACTCCTGCATCGCCGTCACCGGAAAATACCAAG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGGTACTCCGCAGGAGTaGGAAGGCTCTCGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSGTPQE*EGSRKE
Trigger: TTCTTTCCGAGAGCCTTCTCACTCCTGCGGAGTACC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTCACCTCCCTGCAGTTaGGCAATCGGTCCACCAATC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSSPPCS*AIGPPI
Trigger: GATTGGTGGACCGATTGCTCAACTGCAGGGAGGTGA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGGGAAGGAGGTCACGTaGAGTGTCACAATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSGKEVT*SVTMLG
Trigger: CCCCAACATTGTGACACTTCACGTGACCTCCTTCCC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTGGGACTGCCCAGGATaGTCTCAAAGTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSWDCPG*SQSAPP
Trigger: TGGAGGAGCACTTTGAGATCATCCTGGGCAGTCCCA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACTCCTCTGGCCGGTCCTaGGGCTACAGTCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHSSGRS*GYSRAG
Trigger: CCCAGCCCGACTGTAGCCTCAGGACCGGCCAGAGGA...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGGGAGCACGACGAGGTaGCCGACACCTGGACGCTCC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNGSTTR*PTPGRS
Trigger: GGAGCGTCCAGGTGTCGGTCACCTCGTCGTGCTCCC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGGGAGCACGACGAGGTaGCCGACACCTGGACGCTCC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVGSTTR*PTPGRS
Trigger: GGAGCGTCCAGGTGTCGGTCACCTCGTCGTGCTCCC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTCTCCCCAGCAGAGTTaGCATCCACCACGTTCCACA +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSSPQQS*HPPRST
Trigger: TGTGGAACGTGGTGGATGTCAACTCTGCTGGGGAGA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGCAGGGCGTAGTGCATaGTGTCGGGGGCCGCCTCGA +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHAGRSA*CRGPPR
Trigger: TCGAGGCGGCCCCCGACATCATGCACTACGCCCTGC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTCCGGTCCTGACAGATaGCACACAACGTCGCACCTT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSSGPDR*HTTSHL
Trigger: AAGGTGCGACGTTGTGTGTCATCTGTCAGGACCGGA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGCATCTCAGATTCGGTaGAAAAGCCTGGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSASQIR*KSLAPR
Trigger: GCGTGGAGCCAGGCTTTTGCACCGAATCTGAGATGC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACCGTGCACGCTGTCGTTaGAGGAGCTGGCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNRARCR*RSWRPG
Trigger: GCCTGGCCGCCAGCTCCTGCAACGACAGCGTGCACG...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGGGCTGATGAGGGTGTaGTGTGTCTGCAGTGCATAC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSGLMRV*CVCSAY
Trigger: GTATGCACTGCAGACACAGCACACCCTCATCAGCCC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAGTCCACTCCATTACTaGAGGAGGCAGGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSSPLHY*RRQASG
Trigger: TCCACTGGCCTGCCTCCTGCAGTAATGGAGTGGACT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCCCAAGGGAACCTCGTTaGTCACAAAGTAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPPREPR*SQSRQP
Trigger: TGGCTGCCTACTTTGTGAGCAACGAGGTTCCCTTGG...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGTCGGCCCGGGACTGTaGCTGCTGATGGCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHVGPGL*LLMAEG
Trigger: ACCCTCGGCCATCAGCAGGCACAGTCCCGGGCCGAC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGTCGGCCCGGGACTGTaGCTGCTGATGGCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVVGPGL*LLMAEG
Trigger: ACCCTCGGCCATCAGCAGGCACAGTCCCGGGCCGAC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGAGCACTGGGAGGCCTaGAGGACCCACGTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVEHWEA*RTHVPA
Trigger: TGCCGGCACGTGGGTCCTGCAGGCCTCCCAGTGCTC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGAGAAGGCAAAGGCGTaGAGGGTGGACTCATACAGC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSEKAKA*RVDSYS
Trigger: GCTGTATGAGTCCACCCTGCACGCCTTTGCCTTCTC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTTGACAACCAGCACGTaGAAATGGCTGGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSLTTST*KWLAPS
Trigger: GGACGGTGCCAGCCATTTGCACGTGCTGGTTGTCAA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCACCAGGAGAACTCCCTaGTTCTCTCCCCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSTRRTP*FSPQQS
Trigger: ACTCTGCTGGGGAGAGAAGCAGGGAGTTCTCCTGGT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACCGCTGGCCCGGGTCTTaGTGGACCACTTCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNRWPGS*WTTSAG
Trigger: GCCTGCGGAAGTGGTCCAGCAAGACCCGGGCCAGCG...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCGGGAGAAGGGCTCTTaGACCTCGCTGGCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVREKGS*TSLARV
Trigger: GACCCGGGCCAGCGAGGTGCAAGAGCCCTTCTCCCG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCGGGAGAAGGGCTCTTaGACCTCGCTGGCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHREKGS*TSLARV
Trigger: GACCCGGGCCAGCGAGGTGCAAGAGCCCTTCTCCCG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp GTGCCACCCAGGGCTTCTGATGCAGAAGTGGGGCCTGATTCTGATTCCAGGATGTCCCGCCTCCTGGGCTaGGCCTTTGATCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: VPPRASDAEVGPDSDSRMSRLLG*AFDLCL
Trigger: CAGGCACAGATCAAAGGCGCAGCCCAGGAGGCGGGA...CATCCTGGAATCAGAATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp CCAGGTGAAGCGGTGAAGCTATCAAATCCTCTCGGGGCTGCTGAGCTCCCAAAGCAGAGGTGGAAAGTGTaGAGGGGCTCCCGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PGEAVKLSNPLGAAELPKQRWKV*RGSRLL
Trigger: CAGGAGGCGGGAGCCCCTGCACACTTTCCACCTCTG...CTTTGGGAGCTCAGCAGCCCCGAGAGGATTTGATAGCTTCACCGCTTCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp CACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATGCCCAGCAGCTCCCATaGCCCCTCTGGCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: HTAHYCSKILPSSSCAAHAQQLP*PLWPWP
Trigger: GGGCCAAGGCCAGAGGGGGCATGGGAGCTGCTGGGC...ATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGGCAAAACCCGTCTGTaGTACAGCATCCTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPGKTRL*YSILQA
Trigger: TGCCTGAAGGATGCTGTACCACAGACGGGTTTTGCC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGTCAGGAACAGACACTaGTTCTCCAGAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSVRNRH*FSRGHH
Trigger: GTGGTGGCCTCTGGAGAACCAGTGTCTGTTCCTGAC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACTGCGGCGGCGCCTGCTaGTACTGCCGGATCTCGGTC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHCGGAC*YCRISV
Trigger: GACCGAGATCCGGCAGTACCAGCAGGCGCCGCCGCA...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACTGTCGTTGCAGGAGCTaGCGGCCAGGCTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHCRCRS*RPGWPA
Trigger: GGCTGGCCAGCCTGGCCGCCAGCTCCTGCAACGACA...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGAAAGAATCCGGGCTTaGTATTTTCCGGTGACGGCG +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPERIRA*YFPVTA
Trigger: CGCCGTCACCGGAAAATACCAAGCCCGGATTCTTTC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGGGCCGGATGCTGTGTaGCTCCAGATTGTAACTTGT +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPGPDAV*LQIVTC
Trigger: ACAAGTTACAATCTGGAGCCACACAGCATCCGGCCC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGAAGTGTCACAATGTTaGGGGCCTCCTTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSEVSQC*GPPSPP
Trigger: GGGAGGTGAAGGAGGCCCCCAACATTGTGACACTTC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGGAGGGAGGCGGCCTTaGGCAGGCCACTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHGGRRP*AGHCCQ
Trigger: CTGACAGCAGTGGCCTGCCCAAGGCCGCCTCCCTCC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTGTACGCTGCGTACTTaGACAGTCTCATCCGTGCCG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSCTLRT*TVSSVP
Trigger: CGGCACGGATGAGACTGTCCAAGTACGCAGCGTACA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGTGACGGCCGGTGGTTaGAGTGAATGTCGGACTTTT +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPVTAGG*SECRTF
Trigger: AAAAGTCCGACATTCACTCCAACCACCGGCCGTCAC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGGGGCACAGATGTACTaGGCCGGCACGACCGCGGCA +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNGAQMY*AGTTAA
Trigger: TGCCGCGGTCGTGCCGGCCCAGTACATCTGTGCCCC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCAAGAAGAGGTGGCTGTaGTGCTGCAGGAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPKKRWL*CCRNFS
Trigger: GGAGAAGTTCCTGCAGCACCACAGCCACCTCTTCTT...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCACCTGGACAGTCCCTaGGGTCCATTCCAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSHLDSP*GPFQSN
Trigger: GTTTGACTGGAATGGACCCCAGGGACTGTCCAGGTG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCACGCAAGGTAGAAGGTaGAACAGCTGCAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPTQGRR*NSCKEE
Trigger: TTCCTCCTTGCAGCTGTTTCACCTTCTACCTTGCGT...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGCAGGCTGGGGGACTTaGCCCCCACGAGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVAGWGT*PPRGES
Trigger: GCTTTCTCCTCGTGGGGGTCAAGTCCCCCAGCCTGC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGCAGGCTGGGGGACTTaGCCCCCACGAGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNAGWGT*PPRGES
Trigger: GCTTTCTCCTCGTGGGGGTCAAGTCCCCCAGCCTGC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp CTCGCCATTACCACAGGTGTCTCACTGCTCCTTGGCACATACGGTAACTCCCAAGCAGGCTGGGGGACTTaGCCCCCACGAGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LAITTGVSLLLGTYGNSQAGWGT*PPRGES
Trigger: GCTTTCTCCTCGTGGGGGTCAAGTCCCCCAGCCTGC...TTGGGAGTTACCGTATGTGCCAAGGAGCAGTGAGACACCTGTGGTAATGGCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR TCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCCCCACGGTGACGCCTaGGCTGGGACTGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSPHGDA*AGTAQD
Trigger: ATCCTGGGCAGTCCCAGCTCAGGCGTCACCGTGGGG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGGGAGCACGACGAGGTaGCCGACACCTGGACGCTCC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSGSTTR*PTPGRS
Trigger: GGAGCGTCCAGGTGTCGGTCACCTCGTCGTGCTCCC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACAAGAGCTGGCCCACATaGCCGAGGGGGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHKSWPT*PRGRAG
Trigger: TCCTGCCCTCCCCCTCGGTCATGTGGGCCAGCTCTT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGAAGAGCTGGCCCACATaGCCGAGGGGGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVKSWPT*PRGRAG
Trigger: TCCTGCCCTCCCCCTCGGTCATGTGGGCCAGCTCTT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGAGGCAGGAGAATGGTaGGAACCCGGGAGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNEAGEW*EPGRRS
Trigger: GCTCCGCCTCCCGGGTTCTCACCATTCTCCTGCCTC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCTCAGCTGCAGCTACTaGCGGGCAATTACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSLSCSY*RAITGS
Trigger: ACTTCCTGTAATTGCCCGGCAGTAGCTGCAGCTGAG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234142.9
CDS-3UTR GCA 90 bp AAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCACCCAGGGCTTTGGGGAAGGCAGCCGTaGTCTCCAGGGCTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: KTLLLKGLPNTCWCHPGLWGRQP*SPGLGR
Trigger: TCTTCCCAGCCCTGGAGAGCACGGCTGCCTTCCCCA...AAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCACGCAGGACATGCCTaGGCTCTCATACTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSHAGHA*ALILSS
Trigger: AGAGCTAAGTATGAGAGCGCAGGCATGTCCTGCGTG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCGGATCTCGGTCAGGTaGGACTCGCGCCAAGAGCGC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHRISVR*DSRQER
Trigger: GCGCTCTTGGCGCGAGTCGCACCTGACCGAGATCCG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGGCGCCTGCTGGTACTaGCGGATCTCGGTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNGACWY*RISVRC
Trigger: GCACCTGACCGAGATCCGGCAGTACCAGCAGGCGCC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGGCGCCTGCTGGTACTaGCGGATCTCGGTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVGACWY*RISVRC
Trigger: GCACCTGACCGAGATCCGGCAGTACCAGCAGGCGCC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGGTCCAGATTTTGGGTaGTGGAATCCGCAATGGAAC +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPGPDFG*WNPQWN
Trigger: GTTCCATTGCGGATTCCAGCACCCAAAATCTGGACC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACTGGCCGCAGGGGCACTaGTTCGGGGAGTTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNWPQGH*FGELRR
Trigger: CCTCCTCAACTCCCCGAAGCAGTGCCCCTGCGGCCA...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTGCCACATCCTGAGCTaGTTTACGAAGTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSCHILS*FTKCFP
Trigger: GGGGAAGCACTTCGTAAAGCAGCTCAGGATGTGGCA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCCAAGGGAACCTCGTTaGTCACAAAGTAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSPREPR*SQSRQP
Trigger: TGGCTGCCTACTTTGTGAGCAACGAGGTTCCCTTGG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCTCTCCCTGGGGGAGTaGTGTGGGCTGAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVLSLGE*CGLSRG
Trigger: TCCTCGGCTCAGCCCACAGCACTCCCCCAGGGAGAG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACTGGGGCGACCTGGCATaGTCTCCCTGGGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNWGDLA*SPWGSA
Trigger: AGCACTCCCCCAGGGAGAGCATGCCAGGTCGCCCCA...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGTGGGGCGACCTGGCATaGTCTCCCTGGGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVWGDLA*SPWGSA
Trigger: AGCACTCCCCCAGGGAGAGCATGCCAGGTCGCCCCA...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGGCCCTCGGCCCGGTTaGCGTAGTCCATGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSGPRPG*RSPCGW
Trigger: CCAGCCACATGGACTACGGCAACCGGGCCGAGGGCC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGCTGGCACCGTCCATTaGGTGGTACAGATTAAAGAG +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPAGTVH*VVQIKE
Trigger: CTCTTTAATCTGTACCACGCAATGGACGGTGCCAGC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACTCGCGCAGCCGGAACTaGCACTCGTCCTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHSRSRN*HSSSSS
Trigger: GGAGCTCGAGGACGAGTGGCAGTTCCGGCTGCGCGA...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AAGCTGGTGCCTGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCAGCTGGGATGACAGGTaGGCATCACCACCACACCCG +
Preference number: 4 (lower is better)
Translates to: KLVPGAQVTFSKTLLLKGSWDDR*ASPPHP
Trigger: CGGGTGTGGTGGTGATGCGCACCTGTCATCCCAGCT...GCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCAGGCACCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCATCCATGGGCTCGTTaGAAATGGAGACAAGGCGCA +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSHPWAR*KWRQGA
Trigger: TGCGCCTTGTCTCCATTTCCAACGAGCCCATGGATG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCAGGAACGGGCTCGCTaGGGAAGGCAGCCGTGCTCT +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVQERAR*GRQPCS
Trigger: AGAGCACGGCTGCCTTCCCCAGCGAGCCCGTTCCTG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCAGGAACGGGCTCGCTaGGGAAGGCAGCCGTGCTCT +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHQERAR*GRQPCS
Trigger: AGAGCACGGCTGCCTTCCCCAGCGAGCCCGTTCCTG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp CCAGGTGAAGCGGTGAAGCTATCAAATCCTCTCGGGGCTGCTGAGCTCCCAAAGGGGGTGATCAGAAGCTaGTCCTGCCTGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PGEAVKLSNPLGAAELPKGVIRS*SCLLSS
Trigger: GGAGCTCAGCAGGCAGGACCAGCTTCTGATCACCCC...CTTTGGGAGCTCAGCAGCCCCGAGAGGATTTGATAGCTTCACCGCTTCACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTTGCGGCGGCGCCTGCTaGTACTGCCGGATCTCGGTC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSCGGAC*YCRISV
Trigger: GACCGAGATCCGGCAGTACCAGCAGGCGCCGCCGCA...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACAGGACCATGAGCCCGTaGCCGCAGGGGCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHRTMSP*PQGHCF
Trigger: GAAGCAGTGCCCCTGCGGCCACGGGCTCATGGTCCT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGAGGTGACCGACACCTaGACGCTCCTCTGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHEVTDT*TLLWPV
Trigger: GACCGGCCAGAGGAGCGTCCAGGTGTCGGTCACCTC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGAGGTGACCGACACCTaGACGCTCCTCTGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNEVTDT*TLLWPV
Trigger: GACCGGCCAGAGGAGCGTCCAGGTGTCGGTCACCTC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGGCCACTGCTGTCAGTaGACACAACCATGTCGTACA +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSGHCCQ*TQPCRT
Trigger: TGTACGACATGGTTGTGTCCACTGACAGCAGTGGCC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCGTAGTCCATGTGGCTaGGCCGGGGCACCGTCCACT +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHRSPCG*AGAPST
Trigger: AGTGGACGGTGCCCCGGCCCAGCCACATGGACTACG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTGGCTGAAGACAAAGTaGTGCTCCTTGGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSWLKTK*CSLDLG
Trigger: CCCCAAGTCCAAGGAGCACCACTTTGTCTTCAGCCA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGCTCTTGCACCTCGCTaGCCCGGGTCTTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVALAPR*PGSCWT
Trigger: GGTCCAGCAAGACCCGGGCCAGCGAGGTGCAAGAGC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGCTCTTGCACCTCGCTaGCCCGGGTCTTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNALAPR*PGSCWT
Trigger: GGTCCAGCAAGACCCGGGCCAGCGAGGTGCAAGAGC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTTGTACTGCACGTTCTaGGTCAGGTCCACGTTCAGG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSLYCTF*VRSTFR
Trigger: CCTGAACGTGGACCTGACCCAGAACGTGCAGTACAA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCACAGGAACCGGTTCTaGTTGTACTGCACGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSHRNRF*LYCTFW
Trigger: CCAGAACGTGCAGTACAACCAGAACCGGTTCCTGTG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGGGGCACAGATGTACTaGGCCGGCACGACCGCGGCA +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSGAQMY*AGTTAA
Trigger: TGCCGCGGTCGTGCCGGCCCAGTACATCTGTGCCCC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACTTCTCCAGCAGGAGCTaGGCGGGCGCTGCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHFSSRS*AGAARN
Trigger: GTTCCTCGCAGCGCCCGCCCAGCTCCTGCTGGAGAA...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGTTCTCCAGCAGGAGCTaGGCGGGCGCTGCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVFSSRS*AGAARN
Trigger: GTTCCTCGCAGCGCCCGCCCAGCTCCTGCTGGAGAA...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCACAGACAGCACTGGGTaGTCATGGTTCTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSTDSTG*SWFFRD
Trigger: GTCCCTGAAGAACCATGACCACCCAGTGCTGTCTGT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAGGCGGACGACCGTCTaGCGCAGTGAGCTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSRRTTV*RSELRS
Trigger: GGACCGGAGCTCACTGCGCCAGACGGTCGTCCGCCT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACCCAGGCGCCGGGCAATaGGTGGCCTCTCAACTGTGG +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNPGAGQ*VASQLW
Trigger: CCACAGTTGAGAGGCCACCCATTGCCCGGCGCCTGG...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AAGCTGGTGCCTGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCATCTGTGCCTGGGGATaGAAGAGGATGCGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: KLVPGAQVTFSKTLLLKGICAWG*KRMRGA
Trigger: CGCCCCACGCATCCTCTTCCATCCCCAGGCACAGAT...GCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCAGGCACCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR TCA 90 bp CCAGGTGAAGCGGTGAAGCTATCAAATCCTCTCGGGGCTGCTGAGCTCCCAAAGGCGTTTAGTGAGGGGTaGTCAGAAGCTGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PGEAVKLSNPLGAAELPKAFSEG*SEAGPA
Trigger: GGCAGGACCAGCTTCTGATCACCCCTCACTAAACGC...CTTTGGGAGCTCAGCAGCCCCGAGAGGATTTGATAGCTTCACCGCTTCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR TCA 90 bp CTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCACCCAGGGCTTCTGATGCACTGGAAAGGTGACTaGAGCTGGTCCCACCAAGCC +
Preference number: 4 (lower is better)
Translates to: LLLKGLPNTCWCHPGLLMHWKGD*SWSHQA
Trigger: GGCTTGGTGGGACCAGCTTCAGTCACCTTTCCAGTG...CATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR TCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAGTGCTTCCCCACGGTaGCGCCTGAGCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSSASPR*RLSWDC
Trigger: GCAGTCCCAGCTCAGGCGTCACCGTGGGGAAGCACT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCCCATCTCGTATTCCTTaGCAACCAGCACGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPPSRIP*QPARAN
Trigger: ATTTGCACGTGCTGGTTGTCAAGGAATACGAGATGG...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGACCGTCTGGCGCAGTaGGCTCCGGTCCTGACAGAT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNDRLAQ*APVLTD
Trigger: ATCTGTCAGGACCGGAGCTCACTGCGCCAGACGGTC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACCCTGGGCTGCGCCTTTaGTCTGTGCCTGGGGATGGA +
Preference number: 4 (lower is better)
Translates to: WGTGHVLKDTASQGLAKHPGLRL*SVPGDG
Trigger: TCCATCCCCAGGCACAGATCAAAGGCGCAGCCCAGG...GTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGCCTCGATGGAATTGTaGAAGACCTCTTCAAAGCGT +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPASMEL*KTSSKR
Trigger: ACGCTTTGAAGAGGTCTTGCACAATTCCATCGAGGC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CCAAACACTTGCTGGTGCCACCCAGGGCTTCTGATGCAGAAGTGGGGCCTGATTAGAGCGGCAAGCTGCTaGTCAGCTTCCAGGTACAGC +
Preference number: 4 (lower is better)
Translates to: PNTCWCHPGLLMQKWGLIRAASC*SASRYS
Trigger: GCTGTACCTGGAAGCTGAGCAGCAGCTTGCCGCTCT...AATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCCCACCAAGCCAACCTaGGGCACGCAGGACATGCCT +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVPTKPT*GTQDMP
Trigger: AGGCATGTCCTGCGTGCCGCAGGTTGGCTTGGTGGG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCTGAAGACAAAGTGGTaGTCCTTGGACTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSLKTKW*SLDLGM
Trigger: CATCCCCAAGTCCAAGGAGCACCACTTTGTCTTCAG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCGAGGGGTAGTCGCATaGTCTCCAGCTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHRGVVA*SPAGLQ
Trigger: CTGGAGGCCAGCTGGAGAGCATGCGACTACCCCTCG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGATTCCCAGCTCCTCCTaGCGGTTCCGCTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVIPSSS*RFRSSS
Trigger: GGAGCTCGAGCGGAACCGGCAGGAGGAGCTGGGAAT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACAGGAGGCCGGCGCTGTaGACCCGCAGGTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHRRPAL*TRRLKS
Trigger: AGACTTCAACCTGCGGGTGCACAGCGCCGGCCTCCT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGCATCTCCTCGGAGATaGGCTGGATGGCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHASPRR*AGWQRR
Trigger: GCGCCTCTGCCATCCAGCCCATCTCCGAGGAGATGC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTTCCATCAAGGGCACCTaGTCCGCGGCCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSSIKGT*SAASWT
Trigger: GGTCCAGCTGGCCGCGGACCAGGTGCCCTTGATGGA...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGAGGAGGAGGACAGCTaGGAGCACGACGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHEEEDS*EHDEVT
Trigger: GGTCACCTCGTCGTGCTCCCAGCTGTCCTCCTCCTC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGAGGAGGAGGACAGCTaGGAGCACGACGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNEEEDS*EHDEVT
Trigger: GGTCACCTCGTCGTGCTCCCAGCTGTCCTCCTCCTC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCGTAGTCCATGTGGCTaGGCCGGGGCACCGTCCACT +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSRSPCG*AGAPST
Trigger: AGTGGACGGTGCCCCGGCCCAGCCACATGGACTACG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGCGAACAAATCAGGCTaGCATCTTCATACTTCGGGT +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPANKSG*HLHTSG
Trigger: ACCCGAAGTATGAAGATGCCAGCCTGATTTGTTCGC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGCGGCCGGTCTTCCCTaGCATTGGCGGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHAAGLP*HWRSGT
Trigger: AGTTCCAGACCGCCAATGCCAGGGAAGACCGGCCGC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGCGGCCGGTCTTCCCTaGCATTGGCGGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNAAGLP*HWRSGT
Trigger: AGTTCCAGACCGCCAATGCCAGGGAAGACCGGCCGC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACACTGCGGAGTCTTCCTaGCTCCCAGGACCACGGCCT +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHTAESS*LPGPRP
Trigger: AGGCCGTGGTCCTGGGAGCCAGGAAGACTCCGCAGT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCAATCAGGTTTGTCCATaGAAGCACACGAATGGCAGG +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPNQVCP*KHTNGR
Trigger: CCTGCCATTCGTGTGCTTCCATGGACAAACCTGATT...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCACAGGGGAACCTACTTaGCTGAAATCCCATCTACTG +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPTGEPT*LKSHLL
Trigger: CAGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGT...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAAAATTAGCTGGGCATaGTGGTGGGCGCCCATAATC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSKISWA*WWAPII
Trigger: GATTATGGGCGCCCACCACCATGCCCAGCTAATTTT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TTCATTCTGAGGACAGCCCTCAGAGGTGGAATTGCCCAGGTCGGGTTCAAATATGCAGGCTGGGGGACTTaGCCCCCACGAGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: FILRTALRGGIAQVGFKYAGWGT*PPRGES
Trigger: GCTTTCTCCTCGTGGGGGTCAAGTCCCCCAGCCTGC...ATATTTGAACCCGACCTGGGCAATTCCACCTCTGAGGGCTGTCCTCAGAATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCACTTCGGGTCGTGAATaGTGTAGTCAAAGGGCAACT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSTSGRE*CSQRAT
Trigger: AGTTGCCCTTTGACTACATCATTCACGACCCGAAGT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGGCCGGTGGTTGGAGTaGATGTCGGACTTTTTATAT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSGRWLE*MSDFLY
Trigger: ATATAAAAAGTCCGACATTCACTCCAACCACCGGCC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACAAGAGCCCATGTTCGTaGCGGCCGGTGGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHKSPCS*RPVVGV
Trigger: CACTCCAACCACCGGCCGTCACGAACATGGGCTCTT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACAGATGTCCTGCGGCTTaGTTCCCAGCTCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNRCPAA*FPAPPA
Trigger: GGCAGGAGGAGCTGGGAATCAAGCCGCAGGACATCT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACACAGCAGCAGCCCACTaGACAGCAAGTCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHTAAAH*TASPSS
Trigger: GCTGCTCGGACTTGCTGTTCAGTGGGCTGCTGCTGT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCTTTGGGCTAGCCTCTaGAACAGCAAACTTATAGGC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSLWASL*NSKLIG
Trigger: GCCTATAAGTTTGCTGTTTCAGAGGCTAGCCCAAAG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCAGTCTGTGAAGGGGTaGGCCCTAAGAAATACATCT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSQSVKG*ALRNTS
Trigger: AGATGTATTTCTTAGGGCTCACCCCTTCACAGACTG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAGCTCTTTCCAGCAGTaGGAACTTGGAAAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSSSFQQ*ELGKVD
Trigger: GTCTACCTTTCCAAGTTCTCACTGCTGGAAAGAGCT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCGAGGGGTAGTCGCATaGTCTCCAGCTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSRGVVA*SPAGLQ
Trigger: CTGGAGGCCAGCTGGAGAGCATGCGACTACCCCTCG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTATTCCCAGCTCCTCCTaGCGGTTCCGCTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSIPSSS*RFRSSS
Trigger: GGAGCTCGAGCGGAACCGGCAGGAGGAGCTGGGAAT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAGGAGGCCGGCGCTGTaGACCCGCAGGTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSRRPAL*TRRLKS
Trigger: AGACTTCAACCTGCGGGTGCACAGCGCCGGCCTCCT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGCTGCGAGGAACGTGTaGTTGCTGTCCGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSAARNV*LLSGAQ
Trigger: CTGTGCCCCGGACAGCAAGCACACGTTCCTCGCAGC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp GGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGAGCCTGGCTCGGGTCTaGCTGACACCCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GHVLKDTASQGLAKHLLVSLARV*LTPRLP
Trigger: AGGAAGCCTGGGTGTCAGGCAGACCCGAGCCAGGCT...CACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp CTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCACCCAGGGCTTCTGATGCCAAACACTTGCTGGTaGCACCCAGGGCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: LLLKGLPNTCWCHPGLLMPNTCW*HPGLLM
Trigger: CATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGG...CATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp CTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCACCCAGGGCTTCTGATGTTTGAGACAGTGTCTTaGTCTGTCCCCGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LLLKGLPNTCWCHPGLLMFETVS*SVPGLE
Trigger: CTCCAGCCCGGGGACAGAGCAAGACACTGTCTCAAA...CATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACTGGGCACCAGGTTGTTaGACCGCAGGGATGCCTCGA +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNWAPGC*TAGMPR
Trigger: TCGAGGCATCCCTGCGGTCCAACAACCTGGTGCCCA...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACTGGGCACCAGGTTGTTaGACCGCAGGGATGCCTCGA +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHWAPGC*TAGMPR
Trigger: TCGAGGCATCCCTGCGGTCCAACAACCTGGTGCCCA...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp AAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCACCCAGGGCTTGGGAAAAGATGGGCCTaGGCACCAGGTTGTTGGACC +
Preference number: 4 (lower is better)
Translates to: KTLLLKGLPNTCWCHPGLGKRWA*APGCWT
Trigger: GGTCCAACAACCTGGTGCCCAGGCCCATCTTTTCCC...AAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp AAGCTGGTGCCTGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCACAGCTGGGAAAAGATaGGCCTGGGCACCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: KLVPGAQVTFSKTLLLKGTAGKR*AWAPGC
Trigger: ACAACCTGGTGCCCAGGCCCATCTTTTCCCAGCTGT...GCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCAGGCACCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp AAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCACCCAGGGCTTAGGTCCTTCCCGGCCTaGCAAAACCCGTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: KTLLLKGLPNTCWCHPGLRSFPA*QNPSVV
Trigger: TACCACAGACGGGTTTTGCCAGGCCGGGAAGGACCT...AAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCCAAGAAGAGCATTGTaGCCATTGTCATCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSPRRAL*PLSSGK
Trigger: CTTGCCAGATGACAATGGCCACAATGCTCTTCTTGG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp AAGCTGGTGCCTGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCCTGGGAAGAGGGAACTaGAACAAGTACTGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: KLVPGAQVTFSKTLLLKGLGRGN*NKYWRG
Trigger: TCCCCGCCAGTACTTGTTCCAGTTCCCTCTTCCCAG...GCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCAGGCACCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp CACTATTGCTCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCAGGAACGGGCTCGCTaGGGAAGGCAGCCGTGCTCT +
Preference number: 4 (lower is better)
Translates to: HYCSKILPSSSCAAHRTGQERAR*GRQPCS
Trigger: AGAGCACGGCTGCCTTCCCCAGCGAGCCCGTTCCTG...ACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGGAGCAATAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCTCCCATCAGGATGCTaGGGTTCGTCCCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVLPSGC*GSSQER
Trigger: CCGTTCCTGGGACGAACCCCAGCATCCTGATGGGAG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTCGCCACTCCCATCAGGATGCTaGGGTTCGTCCCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: SKILPSSSCAAHRTGHSPLPSGC*GSSQER
Trigger: CCGTTCCTGGGACGAACCCCAGCATCCTGATGGGAG...TGGCGAGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGGGGTGATCAGAAGCTaGTCCTGCCTGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHGVIRS*SCLLSS
Trigger: GGAGCTCAGCAGGCAGGACCAGCTTCTGATCACCCC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCTTCTTTGCCAGTTGTTaGCACTTCGGGGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPFFASC*HFGESL
Trigger: CAAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAA...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCTGTTCCCACCACCTTaGGGGCAGCCACCATCTGGA +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVLFPPP*GQPPSG
Trigger: TCCAGATGGTGGCTGCCCCCAAGGTGGTGGGAACAG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp CCAAACACTTGCTGGTGCCACCCAGGGCTTCTGATGCAGAAGTGGGGCCTGATTGTCAGGAACAGACACTaGTTCTCCAGAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: PNTCWCHPGLLMQKWGLIVRNRH*FSRGHH
Trigger: GTGGTGGCCTCTGGAGAACCAGTGTCTGTTCCTGAC...AATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCGGAGATGGGCTGGATaGCAGAGGCGCCGTACTGCT +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSRRWAG*QRRRTA
Trigger: AGCAGTACGGCGCCTCTGCCATCCAGCCCATCTCCG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGTGCGCTACTGCCAGCTaGAAGGGCCGGATGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVCATAS*KGRMLC
Trigger: ACACAGCATCCGGCCCTTCCAGCTGGCAGTAGCGCA...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCCAGATTTTGGGTGCTaGAATCCGCAATGGAACACA +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSPDFGC*NPQWNT
Trigger: TGTGTTCCATTGCGGATTCCAGCACCCAAAATCTGG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCAGATCCCAGTGCGCATaGTCATGGATTAGGACAAAA +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPRSQCA*SWIRTK
Trigger: TTTTGTCCTAATCCATGACCATGCGCACTGGGATCT...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGAGGATGCTGAGTCGTaGGAGCGGGACCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNEDAES*ERDLSL
Trigger: AAGGGAGAGGTCCCGCTCCCACGACTCAGCATCCTC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTACCTGGACGCTCCTCTaGCCGGTCCTGAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSTWTLL*PVLRLQ
Trigger: CTGTAGCCTCAGGACCGGCCAGAGGAGCGTCCAGGT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGTTGGTCAAGGAGCACTaGGAGGCCTGCAGGACCCAC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVLVKEH*EACRTH
Trigger: GTGGGTCCTGCAGGCCTCCCAGTGCTCCTTGACCAA...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACTGGGCAAGAAGACAATaGGTGGCTGGCGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNWARRQ*VAGGRP
Trigger: AGGCCTGCCGCCAGCCACCCATTGTCTTCTTGCCCA...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGTGGGCAAGAAGACAATaGGTGGCTGGCGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVWARRQ*VAGGRP
Trigger: AGGCCTGCCGCCAGCCACCCATTGTCTTCTTGCCCA...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGAACAGCTCCAGGTCTaGCCAGGGGTCGCTAAGCTG +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHEQLQV*PGVAKL
Trigger: CAGCTTAGCGACCCCTGGCCAGACCTGGAGCTGTTC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGCGAACAAATCAGGCTaGCATCTTCATACTTCGGGT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSANKSG*HLHTSG
Trigger: ACCCGAAGTATGAAGATGCCAGCCTGATTTGTTCGC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGATGTGGAAGGACCTGTaGCCGCCCACCACGATCTGC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVMWKDL*PPTTIC
Trigger: GCAGATCGTGGTGGGCGGCCACAGGTCCTTCCACAT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACATGTGGAAGGACCTGTaGCCGCCCACCACGATCTGC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNMWKDL*PPTTIC
Trigger: GCAGATCGTGGTGGGCGGCCACAGGTCCTTCCACAT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTACTGCGGAGTCTTCCTaGCTCCCAGGACCACGGCCT +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSTAESS*LPGPRP
Trigger: AGGCCGTGGTCCTGGGAGCCAGGAAGACTCCGCAGT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCACAGGGGAACCTACTTaGCTGAAATCCCATCTACTG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSTGEPT*LKSHLL
Trigger: CAGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGCGCCGGGCAATGGGTaGCCTCTCAACTGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVAPGNG*PLNCGF
Trigger: AAAGCCACAGTTGAGAGGCCACCCATTGCCCGGCGC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGCGCCGGGCAATGGGTaGCCTCTCAACTGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNAPGNG*PLNCGF
Trigger: AAAGCCACAGTTGAGAGGCCACCCATTGCCCGGCGC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AAGCTGGTGCCTGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCATGCAGATGTCCTGCTaGGCTCGGGGAGTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: KLVPGAQVTFSKTLLLKGMQMSC*ARGVKL
Trigger: CAGCTTTACTCCCCGAGCCCAGCAGGACATCTGCAT...GCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCAGGCACCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp AAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCACCCAGGGCTTGACAGCCCTCAGAGGTaGAATTGCCCAGGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: KTLLLKGLPNTCWCHPGLDSPQR*NCPGRV
Trigger: AACCCGACCTGGGCAATTCCACCTCTGAGGGCTGTC...AAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp TGCTCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTCGCTCCCATGCCCCCTCTaGCCTTGGCCCAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: CSKILPSSSCAAHRTGHSLPCPL*PWPKEE
Trigger: CTCTTCTTTGGGCCAAGGCCAGAGGGGGCATGGGAG...CGAGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR TCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGATTGGAGAATTCCGTaGAGTAACAGAAGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPDWRIP*SNRSLS
Trigger: AGAAAGGCTTCTGTTACTTCACGGAATTCTCCAATC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCTTCTGCTTCTTGGGTTaGGTGGTCAGTTTCAGATTT +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPFCFLG*VVSFRF
Trigger: AAATCTGAAACTGACCACTCAACCCAAGAAGCAGAA...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp AAGCTGGTGCCTGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCGGGAATCTTTGCCGTTaGAAACAGCCGGACCCATTG +
Preference number: 4 (lower is better)
Translates to: KLVPGAQVTFSKTLLLKGGNLCR*KQPDPL
Trigger: CAATGGGTCCGGCTGTTTTCAACGGCAAAGATTCCC...GCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCAGGCACCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR TCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACACACCGGTGTCCCACTaGCATCCAGGGATGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNTPVSH*HPGMLL
Trigger: AAGCAGCATCCCTGGATGTCAGTGGGACACCGGTGT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCGAGAACAAAGGTCCTaGTCACCGCGCTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSREQRS*SPRCAG
Trigger: GCCTGCACAGCGCGGTGATCAGGACCTTTGTTCTCG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGCGGGTCCATCCCACTaGAGATCAGGATGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNAGPSH*RSGCKA
Trigger: TGCCTTGCATCCTGATCTTCAGTGGGATGGACCCGC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGCGGGTCCATCCCACTaGAGATCAGGATGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVAGPSH*RSGCKA
Trigger: TGCCTTGCATCCTGATCTTCAGTGGGATGGACCCGC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGCGGGTCCATCCCACTaGAGATCAGGATGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHAGPSH*RSGCKA
Trigger: TGCCTTGCATCCTGATCTTCAGTGGGATGGACCCGC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGGGAGTGCTGTGGGCTaGGCCGAGGACTCGCCACCG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTGSAVG*AEDSPP
Trigger: CGGTGGCGAGTCCTCGGCTCAGCCCACAGCACTCCC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACATGTCATGGTCTTGCTaGGCAGGGGGCGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHMSWSC*AGGGKS
Trigger: GCTCTTTCCGCCCCCTGCTCAGCAAGACCATGACAT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACATGTCATGGTCTTGCTaGGCAGGGGGCGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNMSWSC*AGGGKS
Trigger: GCTCTTTCCGCCCCCTGCTCAGCAAGACCATGACAT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGGCCTCCAGGTTGGCTaGAGACAAAGTGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVGLQVG*RQSGAP
Trigger: AGGAGCACCACTTTGTCTTCAGCCAACCTGGAGGCC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGGCCTCCAGGTTGGCTaGAGACAAAGTGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHGLQVG*RQSGAP
Trigger: AGGAGCACCACTTTGTCTTCAGCCAACCTGGAGGCC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAAGAGCCCATGTTCGTaGCGGCCGGTGGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSKSPCS*RPVVGV
Trigger: CACTCCAACCACCGGCCGTCACGAACATGGGCTCTT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACAGCTACTCGGGAGGCTaGGGCAGGAGAATGGTGAGA +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHSYSGG*GRRMVR
Trigger: TCTCACCATTCTCCTGCCTCAGCCTCCCGAGTAGCT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGAGGCAGAGGTTGCAGTaGGCCGAGGTCATTGCACCA +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVRQRLQ*AEVIAP
Trigger: TGGTGCAATGACCTCGGCTCACTGCAACCTCTGCCT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGGTGGGCAGATCACCTaGGGCCAGGAGTTCACAAGA +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNGGQIT*GQEFTR
Trigger: TCTTGTGAACTCCTGGCCTCAGGTGATCTGCCCACC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGGTGGGCAGATCACCTaGGGCCAGGAGTTCACAAGA +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVGGQIT*GQEFTR
Trigger: TCTTGTGAACTCCTGGCCTCAGGTGATCTGCCCACC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp AAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCACCCAGGGCTTCCTCCCAAGTTCAAGTaGTTCTCCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KTLLLKGLPNTCWCHPGLPPKFK*FSHLSL
Trigger: GAGGCTGAGGTGGGAGAATCACTTGAACTTGGGAGG...AAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR TCA 90 bp ATGCAGAAGTGGGGCCTGATTCTGATTCCAGGATGGGTCCATGAATTCACGCCTTGGAGTGCAGTGGCGTaGTCTCGGCTCACCACAACC +
Preference number: 4 (lower is better)
Translates to: MQKWGLILIPGWVHEFTPWSAVA*SRLTTT
Trigger: GGTTGTGGTGAGCCGAGATCACGCCACTGCACTCCA...AGGCGTGAATTCATGGACCCATCCTGGAATCAGAATCAGGCCCCACTTCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp AAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCACCCAGGGCTTTCTAGAGCGGCAAGCTaGTGCTCAGCTTCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: KTLLLKGLPNTCWCHPGLSRAAS*CSASRY
Trigger: GTACCTGGAAGCTGAGCAGCAGCTTGCCGCTCTAGA...AAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp CCAAACACTTGCTGGTGCCACCCAGGGCTTCTGATGCAGAAGTGGGGCCTGATTCACGCAGGACATGCCTaGGCTCTCATACTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: PNTCWCHPGLLMQKWGLIHAGHA*ALILSS
Trigger: AGAGCTAAGTATGAGAGCGCAGGCATGTCCTGCGTG...AATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCACTGACATCCAGGGATaGTGCTTTAGTGACAGAAGA +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSTDIQG*CFSDRR
Trigger: TCTTCTGTCACTAAAGCAGCATCCCTGGATGTCAGT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGCTGGAAGGGCCGGATaGTGTGTGGCTCCAGATTGT +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHAGRAG*CVAPDC
Trigger: ACAATCTGGAGCCACACAGCATCCGGCCCTTCCAGC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGAGCTTCTGCGCTACTaGCAGCTGGAAGGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSELLRY*QLEGPD
Trigger: ATCCGGCCCTTCCAGCTGGCAGTAGCGCAGAAGCTC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACCTGATCACCGCGCTGTaGAGGCGGGGGAACCTTTTT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNLITAL*RRGNLF
Trigger: AAAAAGGTTCCCCCGCCTGCACAGCGCGGTGATCAG...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGGCAAGGACTCCCCATaGGGGTCCATCCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSGKDSP*GSIPLK
Trigger: CTTCAGTGGGATGGACCCGCATGGGGAGTCCTTGCC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCCTTGGGCAGGCCACTaGTGTCAGTGGACACAACCA +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHPWAGH*CQWTQP
Trigger: TGGTTGTGTCCACTGACAGCAGTGGCCTGCCCAAGG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCCTTGGGCAGGCCACTaGTGTCAGTGGACACAACCA +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVPWAGH*CQWTQP
Trigger: TGGTTGTGTCCACTGACAGCAGTGGCCTGCCCAAGG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCATGTGCTGCATGATGTaGTTCAAAGACACGTTCCTT +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPMCCMM*FKDTFL
Trigger: AAGGAACGTGTCTTTGAAGCACATCATGCAGCACAT...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCGAGGAACGTGTGCTTaGTGTCCGGGGCACAGATGT +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHRGTCA*CPGHRC
Trigger: ACATCTGTGCCCCGGACAGCAAGCACACGTTCCTCG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCCAGGAGGCAGAGGTTaGAGTGAGCCGAGGTCATTG +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVPGGRG*SEPRSL
Trigger: CAATGACCTCGGCTCACTGCAACCTCTGCCTCCTGG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TTCATTCTGAGGACAGCCCTCAGAGGTGGAATTGCCCAGGTCGGGTTCAAATATGGGGATGGAAGAGGATaGGTGGGGCGCGTAATGCCC +
Preference number: 4 (lower is better)
Translates to: FILRTALRGGIAQVGFKYGDGRG*VGRVMP
Trigger: GGGCATTACGCGCCCCACGCATCCTCTTCCATCCCC...ATATTTGAACCCGACCTGGGCAATTCCACCTCTGAGGGCTGTCCTCAGAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp CCAGGTGAAGCGGTGAAGCTATCAAATCCTCTCGGGGCTGCTGAGCTCCCAAAGTGCTTCTCAAGGGCTTaGCAAACACTTGCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: PGEAVKLSNPLGAAELPKCFSRA*QTLAGA
Trigger: GGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCA...CTTTGGGAGCTCAGCAGCCCCGAGAGGATTTGATAGCTTCACCGCTTCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp GGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGTGGGCACCAGGTTGTTaGACCGCAGGGATGCCTCGA +
Preference number: 4 (lower is better)
Translates to: GHVLKDTASQGLAKHLLVWAPGC*TAGMPR
Trigger: TCGAGGCATCCCTGCGGTCCAACAACCTGGTGCCCA...CACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGGGAAAAGATGGGCCTaGGCACCAGGTTGTTGGACC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHGKRWA*APGCWT
Trigger: GGTCCAACAACCTGGTGCCCAGGCCCATCTTTTCCC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp AAGCTGGTGCCTGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCCAGCTGGAAAGGGTTTaGGGGGCCATTTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: KLVPGAQVTFSKTLLLKGQLERV*GAICFQ
Trigger: CTGGAAACAAATGGCCCCCCAAACCCTTTCCAGCTG...GCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCAGGCACCAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp CTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCACCCAGGGCTTCTGATGCATCCATGGGCTCGTTaGAAATGGAGACAAGGCGCA +
Preference number: 4 (lower is better)
Translates to: LLLKGLPNTCWCHPGLLMHPWAR*KWRQGA
Trigger: TGCGCCTTGTCTCCATTTCCAACGAGCCCATGGATG...CATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCTCCCATCAGGATGCTaGGGTTCGTCCCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSLPSGC*GSSQER
Trigger: CCGTTCCTGGGACGAACCCCAGCATCCTGATGGGAG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp AAATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTCGCCATTACGGGGTGATCAGAAGCTaGTCCTGCCTGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KFYHPPAVQPIGQVTRHYGVIRS*SCLLSS
Trigger: GGAGCTCAGCAGGCAGGACCAGCTTCTGATCACCCC...GTAATGGCGAGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTTCTTTGCCAGTTGTTaGCACTTCGGGGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSFFASC*HFGESL
Trigger: CAAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp GGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCTGTTCCCACCACCTTaGGGGCAGCCACCATCTGGA +
Preference number: 4 (lower is better)
Translates to: GHVLKDTASQGLAKHLLVLFPPP*GQPPSG
Trigger: TCCAGATGGTGGCTGCCCCCAAGGTGGTGGGAACAG...CACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGAGGATGCTGAGTCGTaGGAGCGGGACCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSEDAES*ERDLSL
Trigger: AAGGGAGAGGTCCCGCTCCCACGACTCAGCATCCTC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTTTGGTCAAGGAGCACTaGGAGGCCTGCAGGACCCAC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSLVKEH*EACRTH
Trigger: GTGGGTCCTGCAGGCCTCCCAGTGCTCCTTGACCAA...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACAAGACAATGGGTGGCTaGCGGCAGGCCTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNKTMGG*RQALVK
Trigger: CTTGACCAAGGCCTGCCGCCAGCCACCCATTGTCTT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACCAAGAAGACAATGGGTaGCTGGCGGCAGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNQEDNG*LAAGLG
Trigger: ACCAAGGCCTGCCGCCAGCCACCCATTGTCTTCTTG...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGAACAGCTCCAGGTCTaGCCAGGGGTCGCTAAGCTG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSEQLQV*PGVAKL
Trigger: CAGCTTAGCGACCCCTGGCCAGACCTGGAGCTGTTC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGCACGTGCAAATGGCTaGCACCGTCCATTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVARANG*HRPLRG
Trigger: ACCACGCAATGGACGGTGCCAGCCATTTGCACGTGC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACACCAGCACGTGCAAATaGCTGGCACCGTCCATTGCG +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHTSTCK*LAPSIA
Trigger: CGCAATGGACGGTGCCAGCCATTTGCACGTGCTGGT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACACCTTGGATGTGATGTaGAAGGACCTGTGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNTLDVM*KDLWPP
Trigger: GGGCGGCCACAGGTCCTTCCACATCACATCCAAGGT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGGTCTTCCCTGGCATTaGCGGTCTGGAACTCATCGC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNGLPWH*RSGTHR
Trigger: GCGATGAGTTCCAGACCGCCAATGCCAGGGAAGACC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGAACAGCCCAGAGCAATaGGCTGGCCCAGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVNSPEQ*AGPELG
Trigger: CCCAAGTTCTGGGCCAGCCCATTGCTCTGGGCTGTT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACAACAGCCCAGAGCAATaGGCTGGCCCAGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHNSPEQ*AGPELG
Trigger: CCCAAGTTCTGGGCCAGCCCATTGCTCTGGGCTGTT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCTTGTTCCTCGTGAAATaGGCTTTAAAACAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPLFLVK*ALKQPR
Trigger: TCTGGGCTGTTTTAAAGCCCATTTCACGAGGAACAA...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCCAGCAGTGAGAACTTaGAAAGGTAGACTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSPAVRT*KGRLFA
Trigger: TGCAAAGAGTCTACCTTTCCAAGTTCTCACTGCTGG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTCGCCATTACCACTCAGGAGGCACCTGTaGTCCTGGCCTGACTCTCAT +
Preference number: 4 (lower is better)
Translates to: ILPSSSCAAHRTGHSPLPLRRHL*SWPDSH
Trigger: ATGAGAGTCAGGCCAGGACCACAGGTGCCTCCTGAG...TGGTAATGGCGAGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR TCA 90 bp GGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCACCACTGGAAAGGTaGCTGAAGCTGGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: GHVLKDTASQGLAKHLLVPPLER*LKLVPP
Trigger: TGGTGGGACCAGCTTCAGTCACCTTTCCAGTGGTGG...CACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR TCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGTGTACAAGAGGGGGCTaGCCACGACGTCATTCAGGT +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVCTRGG*PRRHSG
Trigger: ACCTGAATGACGTCGTGGTCAGCCCCCTCTTGTACA...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCTGCTCGTATGCCCGTaGGACAGACTGGGAATTCTG +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVLLVCP*DRLGIL
Trigger: CAGAATTCCCAGTCTGTCTCACGGGCATACGAGCAG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCTGCTCGTATGCCCGTaGGACAGACTGGGAATTCTG +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHLLVCP*DRLGIL
Trigger: CAGAATTCCCAGTCTGTCTCACGGGCATACGAGCAG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACAGTAAGCACACTCGATaGCGTGCACGCTGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNSKHTR*RARCRC
Trigger: GCAACGACAGCGTGCACGTCATCGAGTGTGCTTACT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGGTACTCCGCAGGAGTaGGAAGGCTCTCGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNGTPQE*EGSRKE
Trigger: TTCTTTCCGAGAGCCTTCTCACTCCTGCGGAGTACC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGGGAAGGAGGTCACGTaGAGTGTCACAATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVGKEVT*SVTMLG
Trigger: CCCCAACATTGTGACACTTCACGTGACCTCCTTCCC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACTCTCCCCAGCAGAGTTaGCATCCACCACGTTCCACA +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHSPQQS*HPPRST
Trigger: TGTGGAACGTGGTGGATGTCAACTCTGCTGGGGAGA...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGCAGGGCGTAGTGCATaGTGTCGGGGGCCGCCTCGA +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTAGRSA*CRGPPR
Trigger: TCGAGGCGGCCCCCGACATCATGCACTACGCCCTGC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCAGACACCTTGGATGTaGTGTGGAAGGACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHQTPWM*CGRTCG
Trigger: GCCACAGGTCCTTCCACATCACATCCAAGGTGTCTG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGCAAGTCCGAGCAGCTaGTGTTTAAAGAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHASPSS*CLKSGA
Trigger: GGCCCCACTCTTTAAACATCAGCTGCTCGGACTTGC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACTCCGGTCCTGACAGATaGCACACAACGTCGCACCTT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNSGPDR*HTTSHL
Trigger: AAGGTGCGACGTTGTGTGTCATCTGTCAGGACCGGA...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACAGTGAGCTCCGGTCCTaGCAGATGACACACAACGTC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHSELRS*QMTHNV
Trigger: GACGTTGTGTGTCATCTGTCAGGACCGGAGCTCACT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGGTGGGCAGATCACCTaGGGCCAGGAGTTCACAAGA +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSGGQIT*GQEFTR
Trigger: TCTTGTGAACTCCTGGCCTCAGGTGATCTGCCCACC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCACCCAGGGCTTCTGATGTCAGAAGATTCATTCTaGGGACAGCCCTCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LLLKGLPNTCWCHPGLLMSEDSF*GQPSEV
Trigger: CACCTCTGAGGGCTGTCCTCAGAATGAATCTTCTGA...CATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGCATCTCAGATTCGGTaGAAAAGCCTGGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVASQIR*KSLAPR
Trigger: GCGTGGAGCCAGGCTTTTGCACCGAATCTGAGATGC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACGCATCTCAGATTCGGTaGAAAAGCCTGGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: WGTGHVLKDTASQGLAKHASQIR*KSLAPR
Trigger: GCGTGGAGCCAGGCTTTTGCACCGAATCTGAGATGC...GTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAGAGCGGCAAGCTGCTaGTCAGCTTCCAGGTACAGC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSRAASC*SASRYS
Trigger: GCTGTACCTGGAAGCTGAGCAGCAGCTTGCCGCTCT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACTCTAGAGCGGCAAGCTaGTGCTCAGCTTCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNSRAAS*CSASRY
Trigger: GTACCTGGAAGCTGAGCAGCAGCTTGCCGCTCTAGA...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGTACTGGCGGGGATCTaGCGGCTTCTAAACTCTGAG +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNVLAGI*RLLNSE
Trigger: CTCAGAGTTTAGAAGCCGGCAGATCCCCGCCAGTAC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGAGCTCCCATCAGGATaGTGGGGTTCGTCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSELPSG*WGSSQE
Trigger: TTCCTGGGACGAACCCCAGCATCCTGATGGGAGCTC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CTCGCCATTACCACAGGTGTCTCACTGCTCCTTGGCACATACGGTAACTCCCAAATCAGAAGCTGGTCCTaGCTGCTGAGCTCCCATCAG +
Preference number: 4 (lower is better)
Translates to: LAITTGVSLLLGTYGNSQIRSWS*LLSSHQ
Trigger: CTGATGGGAGCTCAGCAGGCAGGACCAGCTTCTGAT...TTGGGAGTTACCGTATGTGCCAAGGAGCAGTGAGACACCTGTGGTAATGGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGAGCGCAGGAAGATCTaGTCCAGGTCCTCCATCAAG +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNERRKI*SRSSIK
Trigger: CTTGATGGAGGACCTGGAGCAGATCTTCCTGCGCTC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCGTGCACGCTGTCGTTaGAGGAGCTGGCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTRARCR*RSWRPG
Trigger: GCCTGGCCGCCAGCTCCTGCAACGACAGCGTGCACG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGTGCTGTGTCTGCAGTaGATACGGGAAGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNVLCLQ*IREGGH
Trigger: GTGACCTCCTTCCCGTATGCACTGCAGACACAGCAC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACAGGGTGTGCTGTGTCTaGAGTGCATACGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNRVCCV*SAYGKE
Trigger: CTCCTTCCCGTATGCACTGCAGACACAGCACACCCT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCTGATCACCGCGCTGTaGAGGCGGGGGAACCTTTTT +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSLITAL*RRGNLF
Trigger: AAAAAGGTTCCCCCGCCTGCACAGCGCGGTGATCAG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGAGTTGAGGAGGTTCTaGGTGATCTCCAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVELRRF*VISSVS
Trigger: GGAGACGCTGGAGATCACGCAGAACCTCCTCAACTC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAGGATGATCTCAAAGTaGTCCTCCAGCGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSRMISK*SSSASR
Trigger: CCGGCTGGCGCTGGAGGAGCACTTTGAGATCATCCT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCACATCCTCAATTTTCTaGCACATCCTGAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSTSSIF*HILSCF
Trigger: AAAGCAGCTCAGGATGTGGCAGAAAATTGAGGATGT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGAGCACTGGGAGGCCTaGAGGACCCACGTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTEHWEA*RTHVPA
Trigger: TGCCGGCACGTGGGTCCTGCAGGCCTCCCAGTGCTC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGAGAAGGCAAAGGCGTaGAGGGTGGACTCATACAGC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNEKAKA*RVDSYS
Trigger: GCTGTATGAGTCCACCCTGCACGCCTTTGCCTTCTC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGAGAAGGCAAAGGCGTaGAGGGTGGACTCATACAGC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHEKAKA*RVDSYS
Trigger: GCTGTATGAGTCCACCCTGCACGCCTTTGCCTTCTC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACACCAGGAGAACTCCCTaGTTCTCTCCCCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHTRRTP*FSPQQS
Trigger: ACTCTGCTGGGGAGAGAAGCAGGGAGTTCTCCTGGT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACACCAGGAGAACTCCCTaGTTCTCTCCCCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNTRRTP*FSPQQS
Trigger: ACTCTGCTGGGGAGAGAAGCAGGGAGTTCTCCTGGT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCATGTGCTGCATGATGTaGTTCAAAGACACGTTCCTT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSMCCMM*FKDTFL
Trigger: AAGGAACGTGTCTTTGAAGCACATCATGCAGCACAT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGGGGCCGCCTCGATGTaGTGCATGATGTGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNGAASM*CMMCFK
Trigger: TTTGAAGCACATCATGCAGCACATCGAGGCGGCCCC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCGGGAGAAGGGCTCTTaGACCTCGCTGGCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTREKGS*TSLARV
Trigger: GACCCGGGCCAGCGAGGTGCAAGAGCCCTTCTCCCG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCGGTTCTGGTTGTACTaGACGTTCTGGGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHRFWLY*TFWVRS
Trigger: GGACCTGACCCAGAACGTGCAGTACAACCAGAACCG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCGGTTCTGGTTGTACTaGACGTTCTGGGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVRFWLY*TFWVRS
Trigger: GGACCTGACCCAGAACGTGCAGTACAACCAGAACCG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGAAGAGGTGGCTGTGGTaGTGCAGGAACTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVKRWLW*CRNFSS
Trigger: GCTGGAGAAGTTCCTGCAGCACCACAGCCACCTCTT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGTTCCTTTGGAATATTaGTTTGTAGGAGGTTACAGG +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPVPLEY*FVGGYR
Trigger: CCTGTAACCTCCTACAAAGCAATATTCCAAAGGAAC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCCAGGAGGCAGAGGTTaGAGTGAGCCGAGGTCATTG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSPGGRG*SEPRSL
Trigger: CAATGACCTCGGCTCACTGCAACCTCTGCCTCCTGG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TTCATTCTGAGGACAGCCCTCAGAGGTGGAATTGCCCAGGTCGGGTTCAAATATCGTAATGCCCTGCTGTaGAGAGCCTGGCTCGGGTCT +
Preference number: 4 (lower is better)
Translates to: FILRTALRGGIAQVGFKYRNALL*RAWLGS
Trigger: AGACCCGAGCCAGGCTCTGCACAGCAGGGCATTACG...ATATTTGAACCCGACCTGGGCAATTCCACCTCTGAGGGCTGTCCTCAGAATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp GGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGAGGCGTGAGCCACCGTaGCCAGCCCATCAGAAGATT +
Preference number: 4 (lower is better)
Translates to: GHVLKDTASQGLAKHLLVRREPP*PAHQKI
Trigger: AATCTTCTGATGGGCTGGGCACGGTGGCTCACGCCT...CACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGTCTTCTGTTTAAAATaGCATCTCAGATTCGGTGCA +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPVFCLK*HLRFGA
Trigger: TGCACCGAATCTGAGATGCCATTTTAAACAGAAGAC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGACAGCTGGGAAAAGATaGGCCTGGGCACCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVTAGKR*AWAPGC
Trigger: ACAACCTGGTGCCCAGGCCCATCTTTTCCCAGCTGT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAGGTCCTTCCCGGCCTaGCAAAACCCGTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSRSFPA*QNPSVV
Trigger: TACCACAGACGGGTTTTGCCAGGCCGGGAAGGACCT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACTGGGCTCGTTGGAAATaGAGACAAGGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHWARWK*RQGAGP
Trigger: AGGACCTGCGCCTTGTCTCCATTTCCAACGAGCCCA...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGTGGGCTCGTTGGAAATaGAGACAAGGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVWARWK*RQGAGP
Trigger: AGGACCTGCGCCTTGTCTCCATTTCCAACGAGCCCA...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCCGCAGGGACATCCATaGGCTCGTTGGAAATGGAGA +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHPQGHP*ARWKWR
Trigger: TCTCCATTTCCAACGAGCCCATGGATGTCCCTGCGG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp ATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTCGCCATTACCACCGCAGGGACATCCATaGGCTCGTTGGAAATGGAGA +
Preference number: 4 (lower is better)
Translates to: ILPSSSCAAHRTGHSPLPPQGHP*ARWKWR
Trigger: TCTCCATTTCCAACGAGCCCATGGATGTCCCTGCGG...TGGTAATGGCGAGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGAACTGGAACAAGTACTaGCGGGGATCTGCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVNWNKY*RGSAGF
Trigger: GAAGCCGGCAGATCCCCGCCAGTACTTGTTCCAGTT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCCACGTAGTTGGTCTTaGCAAGCTTGCCCTCGACCA +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHPRSWS*QACPRP
Trigger: TGGTCGAGGGCAAGCTTGCCAAGACCAACTACGTGG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAAGACAATGGGTGGCTaGCGGCAGGCCTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSKTMGG*RQALVK
Trigger: CTTGACCAAGGCCTGCCGCCAGCCACCCATTGTCTT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGTGGAAGCCCATGTACTaGTGGCACTGCTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVWKPMY*WHCSQW
Trigger: CCACTGTGAGCAGTGCCACCAGTACATGGGCTTCCA...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCAAAGGCGTGCAGGGTaGACTCATACAGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHQRRAG*THTAGS
Trigger: GCTACCAGCTGTATGAGTCCACCCTGCACGCCTTTG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGCACGTGCAAATGGCTaGCACCGTCCATTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSARANG*HRPLRG
Trigger: ACCACGCAATGGACGGTGCCAGCCATTTGCACGTGC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACATGAAGTTGTGCACGTaGCAGCGGGAGAAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNMKLCT*QREKGS
Trigger: AGAGCCCTTCTCCCGCTGCCACGTGCACAACTTCAT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGGTCTTCCCTGGCATTaGCGGTCTGGAACTCATCGC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSGLPWH*RSGTHR
Trigger: GCGATGAGTTCCAGACCGCCAATGCCAGGGAAGACC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCACCTGGACAGTCCCTaGGGTCCATTCCAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVHLDSP*GPFQSN
Trigger: GTTTGACTGGAATGGACCCCAGGGACTGTCCAGGTG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTTGTTCCTCGTGAAATaGGCTTTAAAACAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSLFLVK*ALKQPR
Trigger: TCTGGGCTGTTTTAAAGCCCATTTCACGAGGAACAA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CCATTACCACAGGTGTCTCACTGCTCCTTGGCACATACGGTAACTCCCAAGTGTAGGCACCTGTGGTCCTaGCCTGACTCTCATGGAAGC +
Preference number: 4 (lower is better)
Translates to: PLPQVSHCSLAHTVTPKCRHLWS*PDSHGS
Trigger: GCTTCCATGAGAGTCAGGCCAGGACCACAGGTGCCT...ACACTTGGGAGTTACCGTATGTGCCAAGGAGCAGTGAGACACCTGTGGTAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389825.7
3UTR CAA 72 bp CTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTaGCTGGTGCCACCCAGGGCTTCTGATGCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: LKDTASQGLAKH*LVPPRASDAEV
Trigger: CACTTCTGCATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGCACTCAGCAGAGCCTaGCACCTCTTAGACTGTTTC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHALSRA*HLLDCF
Trigger: GAAACAGTCTAAGAGGTGTCAGGCTCTGCTGAGTGC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234142.9
CDS-3UTR TCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGGGAATCTTTGCCGTTaGAAACAGCCGGACCCATTG +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVGNLCR*KQPDPL
Trigger: CAATGGGTCCGGCTGTTTTCAACGGCAAAGATTCCC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTTCACCTCCCTGCAGTTaGGCAATCGGTCCACCAATC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSSPPCS*AIGPPI
Trigger: GATTGGTGGACCGATTGCTCAACTGCAGGGAGGTGA...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACAGACATCCACTTCTGTaGGCCGAACAAGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHRHPLL*AEQASW
Trigger: CCAGGATGCTTGTTCGGCTCACAGAAGTGGATGTCT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACTGTGCACCCGCAGGTTaGAGTCTACATCGTCACACA +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHCAPAG*SLHRHT
Trigger: TGTGTGACGATGTAGACTTCAACCTGCGGGTGCACA...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCAGACACCTTGGATGTaGTGTGGAAGGACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSQTPWM*CGRTCG
Trigger: GCCACAGGTCCTTCCACATCACATCCAAGGTGTCTG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGAGGCAGGAGAATGGTaGGAACCCGGGAGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTEAGEW*EPGRRS
Trigger: GCTCCGCCTCCCGGGTTCTCACCATTCTCCTGCCTC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGTTGGACCGCAGGGATaGCTCGATGGAATTGTGCAA +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVVGPQG*LDGIVQ
Trigger: TTGCACAATTCCATCGAGGCATCCCTGCGGTCCAAC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGTTGGACCGCAGGGATaGCTCGATGGAATTGTGCAA +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHVGPQG*LDGIVQ
Trigger: TTGCACAATTCCATCGAGGCATCCCTGCGGTCCAAC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TGTTCTTCCCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCTGGGGAAGGCAGCCGTaGTCTCCAGGGCTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: CSSPTTHCPLLLQNSTILWGRQP*SPGLGR
Trigger: TCTTCCCAGCCCTGGAGAGCACGGCTGCCTTCCCCA...GAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGGGAAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR GCA 90 bp CACTATTGCTCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTGAGCTCCCATCAGGATaGTGGGGTTCGTCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: HYCSKILPSSSCAAHRTGELPSG*WGSSQE
Trigger: TTCCTGGGACGAACCCCAGCATCCTGATGGGAGCTC...ACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGGAGCAATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTATCAGAAGCTGGTCCTaGCTGCTGAGCTCCCATCAG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSIRSWS*LLSSHQ
Trigger: CTGATGGGAGCTCAGCAGGCAGGACCAGCTTCTGAT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCGGATCTCGGTCAGGTaGGACTCGCGCCAAGAGCGC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTRISVR*DSRQER
Trigger: GCGCTCTTGGCGCGAGTCGCACCTGACCGAGATCCG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAGGGTGTGCTGTGTCTaGAGTGCATACGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSRVCCV*SAYGKE
Trigger: CTCCTTCCCGTATGCACTGCAGACACAGCACACCCT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAGCTGCTTTACGAAGTaGTTCCCCACGGTGACGCCT +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSSCFTK*FPTVTP
Trigger: AGGCGTCACCGTGGGGAAGCACTTCGTAAAGCAGCT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGTGCCACATCCTGAGCTaGTTTACGAAGTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVCHILS*FTKCFP
Trigger: GGGGAAGCACTTCGTAAAGCAGCTCAGGATGTGGCA...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGCCGCCTCGATGTGCTaGATGATGTGCTTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNAASMC*MMCFKD
Trigger: GTCTTTGAAGCACATCATGCAGCACATCGAGGCGGC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACAGGATGATGAAGTTGTaGACGTGGCAGCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHRMMKL*TWQREK
Trigger: CTTCTCCCGCTGCCACGTGCACAACTTCATCATCCT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACAGGATGATGAAGTTGTaGACGTGGCAGCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNRMMKL*TWQREK
Trigger: CTTCTCCCGCTGCCACGTGCACAACTTCATCATCCT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCCGCCCACCACGATCTaGTTCTTCATCACGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSPPTTI*FFITLK
Trigger: CTTCAGCGTGATGAAGAAGCAGATCGTGGTGGGCGG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGAGCTGGGCGGGCGCTaGGAGGAACGTGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTELGGR*EERVLA
Trigger: AGCAAGCACACGTTCCTCGCAGCGCCCGCCCAGCTC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAAGAGGTGGCTGTGGTaGTGCAGGAACTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSKRWLW*CRNFSS
Trigger: GCTGGAGAAGTTCCTGCAGCACCACAGCCACCTCTT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGAAGGGAGACCTGGACTaGAGAGTCCAGAAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVKGDLD*RVQKPE
Trigger: TTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACAAGGGAGACCTGGACTaGAGAGTCCAGAAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHKGDLD*RVQKPE
Trigger: TTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTGGGCGCGTAATGCCCTaGTGTGCAGAGCCTGGCTCG +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCVLSCTPGTPFGRVMP*CAEPGS
Trigger: CGAGCCAGGCTCTGCACAGCAGGGCATTACGCGCCC...AAATGGAGTACCTGGAGTACAAGATAACACACACACACACACACACACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp AAGCTGGTGCCTGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCGTGGCTGTCCTCAGCTaGAGCTACTTACAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: KLVPGAQVTFSKTLLLKGVAVLS*SYLQKA
Trigger: AGCTTTTTGTAAGTAGCTGCAGCTGAGGACAGCCAC...GCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCAGGCACCAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp TGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACCGGCTGTGTGTTATATaGAGATGTCCTGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: WGTGHVLKDTASQGLAKHRLCVI*RCPAGL
Trigger: GAGCCCAGCAGGACATCTGCATATAACACACAGCCG...GTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp AAGCTGGTGCCTGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCAGCAAGAAGCTTAACTaGCCTAAACCTCAGTCTCCG +
Preference number: 4 (lower is better)
Translates to: KLVPGAQVTFSKTLLLKGSKKLN*PKPQSP
Trigger: CGGAGACTGAGGTTTAGGGCAGTTAAGCTTCTTGCT...GCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCAGGCACCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACCAGCTGGAAAGGGTTTaGGGGGCCATTTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNQLERV*GAICFQ
Trigger: CTGGAAACAAATGGCCCCCCAAACCCTTTCCAGCTG...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGGCAAAACCCGTCTGTaGTACAGCATCCTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNGKTRL*YSILQA
Trigger: TGCCTGAAGGATGCTGTACCACAGACGGGTTTTGCC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp ATTGCTCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTAGGTCCTTCCCGGCCTaGCAAAACCCGTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: IAPKFYHPPAVQPIGQVTRSFPA*QNPSVV
Trigger: TACCACAGACGGGTTTTGCCAGGCCGGGAAGGACCT...AGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGGAGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp ATGCAGAAGTGGGGCCTGATTCTGATTCCAGGATGGGTCCATGAATTCACGCCTTGGGCTCGTTGGAAATaGAGACAAGGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: MQKWGLILIPGWVHEFTPWARWK*RQGAGP
Trigger: AGGACCTGCGCCTTGTCTCCATTTCCAACGAGCCCA...AGGCGTGAATTCATGGACCCATCCTGGAATCAGAATCAGGCCCCACTTCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCATCCATGGGCTCGTTaGAAATGGAGACAAGGCGCA +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVHPWAR*KWRQGA
Trigger: TGCGCCTTGTCTCCATTTCCAACGAGCCCATGGATG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp CCAAACACTTGCTGGTGCCACCCAGGGCTTCTGATGCAGAAGTGGGGCCTGATTGTGGCCATTGTCATCTaGCAAGAACCTCTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: PNTCWCHPGLLMQKWGLIVAIVI*QEPLVN
Trigger: GTTGACAAGAGGTTCTTGCCAGATGACAATGGCCAC...AATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAGATTAAAGGTCCTTTaGTTAGAGTCCCTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSRLKVL*LESLVH
Trigger: ATGCACAAGGGACTCTAACCAAAGGACCTTTAATCT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp AAATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTCGCCATTACCTGGGAAGAGGGAACTaGAACAAGTACTGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: KFYHPPAVQPIGQVTRHYLGRGN*NKYWRG
Trigger: TCCCCGCCAGTACTTGTTCCAGTTCCCTCTTCCCAG...GTAATGGCGAGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTCAGGAACGGGCTCGCTaGGGAAGGCAGCCGTGCTCT +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCVLSCTPGTPFQERAR*GRQPCS
Trigger: AGAGCACGGCTGCCTTCCCCAGCGAGCCCGTTCCTG...AAATGGAGTACCTGGAGTACAAGATAACACACACACACACACACACACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGCCTTTAAATATCACTaGCTTGGCCTTGCATATTTT +
Preference number: 4 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPAFKYH*LGLAYF
Trigger: AAAATATGCAAGGCCAAGCCAGTGATATTTAAAGGC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTCCATCAAGGGCACCTaGTCCGCGGCCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTSIKGT*SAASWT
Trigger: GGTCCAGCTGGCCGCGGACCAGGTGCCCTTGATGGA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGAAAGAATCCGGGCTTaGTATTTTCCGGTGACGGCG +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVERIRA*YFPVTA
Trigger: CGCCGTCACCGGAAAATACCAAGCCCGGATTCTTTC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGGGCCGGATGCTGTGTaGCTCCAGATTGTAACTTGT +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHGPDAV*LQIVTC
Trigger: ACAAGTTACAATCTGGAGCCACACAGCATCCGGCCC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCCCAGGTCCAGATTTTaGGTGCTGGAATCCGCAATG +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHPRSRF*VLESAM
Trigger: CATTGCGGATTCCAGCACCCAAAATCTGGACCTGGG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGGCCACTGCTGTCAGTaGACACAACCATGTCGTACA +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNGHCCQ*TQPCRT
Trigger: TGTACGACATGGTTGTGTCCACTGACAGCAGTGGCC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTTGGAAGCCCATGTACTaGTGGCACTGCTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSWKPMY*WHCSQW
Trigger: CCACTGTGAGCAGTGCCACCAGTACATGGGCTTCCA...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCAAAGGCGTGCAGGGTaGACTCATACAGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSQRRAG*THTAGS
Trigger: GCTACCAGCTGTATGAGTCCACCCTGCACGCCTTTG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACTGGCTGAAGACAAAGTaGTGCTCCTTGGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHWLKTK*CSLDLG
Trigger: CCCCAAGTCCAAGGAGCACCACTTTGTCTTCAGCCA...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAGCTGGCCTCCAGGTTaGCTGAAGACAAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSSWPPG*LKTKWC
Trigger: GCACCACTTTGTCTTCAGCCAACCTGGAGGCCAGCT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGTGACGGCCGGTGGTTaGAGTGAATGTCGGACTTTT +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVVTAGG*SECRTF
Trigger: AAAAGTCCGACATTCACTCCAACCACCGGCCGTCAC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTGGCCCGGGTCTTGCTaGACCACTTCCGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTWPGSC*TTSAGP
Trigger: TGGGCCTGCGGAAGTGGTCCAGCAAGACCCGGGCCA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCACAGGAACCGGTTCTaGTTGTACTGCACGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVHRNRF*LYCTFW
Trigger: CCAGAACGTGCAGTACAACCAGAACCGGTTCCTGTG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACAAGAAGAGGTGGCTGTaGTGCTGCAGGAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNKKRWL*CCRNFS
Trigger: GGAGAAGTTCCTGCAGCACCACAGCCACCTCTTCTT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGTCGACAGACAGCACTaGGTGGTCATGGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHVDRQH*VVMVLQ
Trigger: CTGAAGAACCATGACCACCCAGTGCTGTCTGTCGAC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCCAGGCGCCGGGCAATaGGTGGCCTCTCAACTGTGG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTPGAGQ*VASQLW
Trigger: CCACAGTTGAGAGGCCACCCATTGCCCGGCGCCTGG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp GGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGAGTAAAGCTGGTGCCTaGGGCACAGGTCACGTTCTC +
Preference number: 4 (lower is better)
Translates to: GHVLKDTASQGLAKHLLVSKAGA*GTGHVL
Trigger: GAGAACGTGACCTGTGCCCCAGGCACCAGCTTTACT...CACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR TCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGAGAAGAGGCAGCGAGTaGGGAAGAAATATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVRRGSE*GRNMAL
Trigger: CAAGGCCATATTTCTTCCTCACTCGCTGCCTCTTCT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAGACATCCACTTCTGTaGGCCGAACAAGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSRHPLL*AEQASW
Trigger: CCAGGATGCTTGTTCGGCTCACAGAAGTGGATGTCT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCAACTCCAGCACTGTTaGAGATACTGGGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSQLQHC*RYWGAP
Trigger: TGGTGCTCCCCAGTATCTTCAACAGTGCTGGAGTTG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACTCCTTGATGAGGAAATaGGCAGCACCAACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNSLMRK*AAPTPA
Trigger: TGCTGGAGTTGGTGCTGCTCATTTCCTCATCAAGGA...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGACCGTCTGGCGCAGTaGGCTCCGGTCCTGACAGAT +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTDRLAQ*APVLTD
Trigger: ATCTGTCAGGACCGGAGCTCACTGCGCCAGACGGTC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp GTTCTTCCCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCCCTGTGGTCCTGGCCTaGCTCTCATGGAAGCCACAT +
Preference number: 4 (lower is better)
Translates to: VLPQQHTAHYCSKILPSSPVVLA*LSWKPH
Trigger: ATGTGGCTTCCATGAGAGTCAGGCCAGGACCACAGG...GGAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGGGAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR GCA 90 bp GGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGGTTGGACCGCAGGGATaGCTCGATGGAATTGTGCAA +
Preference number: 4 (lower is better)
Translates to: GHVLKDTASQGLAKHLLVVGPQG*LDGIVQ
Trigger: TTGCACAATTCCATCGAGGCATCCCTGCGGTCCAAC...CACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp ATTACCACAGGTGTCTCACTGCTCCTTGGCACATACGGTAACTCCCAAGTGTCAGTACTGGCGGGGATCTaGCGGCTTCTAAACTCTGAG +
Preference number: 4 (lower is better)
Translates to: ITTGVSLLLGTYGNSQVSVLAGI*RLLNSE
Trigger: CTCAGAGTTTAGAAGCCGGCAGATCCCCGCCAGTAC...TGACACTTGGGAGTTACCGTATGTGCCAAGGAGCAGTGAGACACCTGTGGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR GCA 90 bp TTCATTCTGAGGACAGCCCTCAGAGGTGGAATTGCCCAGGTCGGGTTCAAATATATCAGAAGCTGGTCCTaGCTGCTGAGCTCCCATCAG +
Preference number: 4 (lower is better)
Translates to: FILRTALRGGIAQVGFKYIRSWS*LLSSHQ
Trigger: CTGATGGGAGCTCAGCAGGCAGGACCAGCTTCTGAT...ATATTTGAACCCGACCTGGGCAATTCCACCTCTGAGGGCTGTCCTCAGAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTCCCACCAAGCCAACCTaGGGCACGCAGGACATGCCT +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCVLSCTPGTPFPTKPT*GTQDMP
Trigger: AGGCATGTCCTGCGTGCCGCAGGTTGGCTTGGTGGG...AAATGGAGTACCTGGAGTACAAGATAACACACACACACACACACACACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCATCCTCGTTGTCTGTaGTGCTCAGCTTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVHPRCL*CSASQH
Trigger: ATGCTGAGAAGCTGAGCAGCACAGACAACGAGGATG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGTTGGGGATGATGAAGTaGAGCTGGATCTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVLGMMK*SWISSP
Trigger: AGGAGAGGAGATCCAGCTGCACTTCATCATCCCCAA...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACCTGAAGACAAAGTGGTaGTCCTTGGACTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNLKTKW*SLDLGM
Trigger: CATCCCCAAGTCCAAGGAGCACCACTTTGTCTTCAG...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGCTGGCACCGTCCATTaGGTGGTACAGATTAAAGAG +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNAGTVH*VVQIKE
Trigger: CTCTTTAATCTGTACCACGCAATGGACGGTGCCAGC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGCCGCCTCGATGTGCTaGATGATGTGCTTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSAASMC*MMCFKD
Trigger: GTCTTTGAAGCACATCATGCAGCACATCGAGGCGGC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGCAGGGATGCCTCGATaGAATTGTGCAAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNAGMPR*NCARPL
Trigger: AAGAGGTCTTGCACAATTCCATCGAGGCATCCCTGC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp CCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCAGCTGTGTGGGCTCGTTGGAAATaGAGACAAGGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PNNTLPTIAPKFYHPPAVWARWK*RQGAGP
Trigger: AGGACCTGCGCCTTGTCTCCATTTCCAACGAGCCCA...CACAGCTGGAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp TTCATTCTGAGGACAGCCCTCAGAGGTGGAATTGCCCAGGTCGGGTTCAAATATCCGCAGGGACATCCATaGGCTCGTTGGAAATGGAGA +
Preference number: 4 (lower is better)
Translates to: FILRTALRGGIAQVGFKYPQGHP*ARWKWR
Trigger: TCTCCATTTCCAACGAGCCCATGGATGTCCCTGCGG...ATATTTGAACCCGACCTGGGCAATTCCACCTCTGAGGGCTGTCCTCAGAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGCTTCTTGGGTTGAGTaGTCAGTTTCAGATTTATAT +
Preference number: 4 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSASWVE*SVSDLY
Trigger: ATATAAATCTGAAACTGACCACTCAACCCAAGAAGC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp CCAAACACTTGCTGGTGCCACCCAGGGCTTCTGATGCAGAAGTGGGGCCTGATTTTCTTTGCCAGTTGTTaGCACTTCGGGGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: PNTCWCHPGLLMQKWGLIFFASC*HFGESL
Trigger: CAAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAA...AATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCGGAGATGGGCTGGATaGCAGAGGCGCCGTACTGCT +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTRRWAG*QRRRTA
Trigger: AGCAGTACGGCGCCTCTGCCATCCAGCCCATCTCCG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACTGCTGGAATCCGCAATaGAACACACATGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNCWNPQ*NTHGRG
Trigger: TCCTCTCCCATGTGTGTTCCATTGCGGATTCCAGCA...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACTGCTGGAATCCGCAATaGAACACACATGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHCWNPQ*NTHGRG
Trigger: TCCTCTCCCATGTGTGTTCCATTGCGGATTCCAGCA...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGCGGGGCCACGGGGCTaGGGCGACCTGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKAGPRG*GDLACS
Trigger: AGAGCATGCCAGGTCGCCCCAGCCCCGTGGCCCCGC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGAGGAGGAGGACAGCTaGGAGCACGACGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTEEEDS*EHDEVT
Trigger: GGTCACCTCGTCGTGCTCCCAGCTGTCCTCCTCCTC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACTGTCGTACACGAGCTTaGGCAAGAAGACAATGGGTG +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNCRTRA*ARRQWV
Trigger: CACCCATTGTCTTCTTGCCCAAGCTCGTGTACGACA...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGAGCAGCCTGCGGGGGTaGAAGCCGTCCACGCGGCCC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKSSLRG*KPSTRP
Trigger: GGGCCGCGTGGACGGCTTCCACCCCCGCAGGCTGCT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGCACCGTCCATTGCGTaGTACAGATTAAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVAPSIA*YRLKSP
Trigger: TGGGCTCTTTAATCTGTACCACGCAATGGACGGTGC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTTTGTACTGCACGTTCTaGGTCAGGTCCACGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSLYCTF*VRSTFR
Trigger: CCTGAACGTGGACCTGACCCAGAACGTGCAGTACAA...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp GGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCTTTGATCTGTGCCTaGGGATGGAAGAGGATGCGT +
Preference number: 4 (lower is better)
Translates to: GHVLKDTASQGLAKHLLVPLICA*GWKRMR
Trigger: ACGCATCCTCTTCCATCCCCAGGCACAGATCAAAGG...CACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp CTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCACCCAGGGCTTCTGATGCTACTTACAAAAAGCTaGTCACTTCAGGCACTCCAC +
Preference number: 4 (lower is better)
Translates to: LLLKGLPNTCWCHPGLLMLLTKS*SLQALH
Trigger: GTGGAGTGCCTGAAGTGACCAGCTTTTTGTAAGTAG...CATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACTGTCCTTCTTCCATTTaGCAGGTCCTCAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHCPSSI*QVLKSC
Trigger: GCAGCTCTTGAGGACCTGCCAAATGGAAGAAGGACA...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381486.7
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACAGCACACCATCCACTTaGCCACCGTATTTTCAGTCG +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHSTPST*PPYFQS
Trigger: CGACTGAAAATACGGTGGCCAAGTGGATGGTGTGCT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396123.2
CDS-3UTR TCA 90 bp ATGCAGAAGTGGGGCCTGATTCTGATTCCAGGATGGGTCCATGAATTCACGCCTACGCAAGGTAGAAGGTaGAACAGCTGCAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: MQKWGLILIPGWVHEFTPTQGRR*NSCKEE
Trigger: TTCCTCCTTGCAGCTGTTTCACCTTCTACCTTGCGT...AGGCGTGAATTCATGGACCCATCCTGGAATCAGAATCAGGCCCCACTTCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR TCA 90 bp GTGCCACCCAGGGCTTCTGATGCAGAAGTGGGGCCTGATTCTGATTCCAGGATGGATTGGAGAATTCCGTaGAGTAACAGAAGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: VPPRASDAEVGPDSDSRMDWRIP*SNRSLS
Trigger: AGAAAGGCTTCTGTTACTTCACGGAATTCTCCAATC...CATCCTGGAATCAGAATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR TCA 90 bp CCATGTTCTTCCCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATCGCGTTTAGTGAGGGGTaGTCAGAAGCTGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PCSSPTTHCPLLLQNSTIAFSEG*SEAGPA
Trigger: GGCAGGACCAGCTTCTGATCACCCCTCACTAAACGC...GATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGGGAAGAACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR TCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAGAAGAGGCAGCGAGTaGGGAAGAAATATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSRRGSE*GRNMAL
Trigger: CAAGGCCATATTTCTTCCTCACTCGCTGCCTCTTCT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGGGAGTGCTGTGGGCTaGGCCGAGGACTCGCCACCG +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKGSAVG*AEDSPP
Trigger: CGGTGGCGAGTCCTCGGCTCAGCCCACAGCACTCCC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTTCCTTGATGAGGAAATaGGCAGCACCAACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSSLMRK*AAPTPA
Trigger: TGCTGGAGTTGGTGCTGCTCATTTCCTCATCAAGGA...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCATCAGAGATCACAATaGAAGGCCAGATGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSHQRSQ*KARCPA
Trigger: CGCAGGACATCTGGCCTTTCATTGTGATCTCTGATG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTACAGCAGCAGCCCACTaGACAGCAAGTCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTTAAAH*TASPSS
Trigger: GCTGCTCGGACTTGCTGTTCAGTGGGCTGCTGCTGT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACCTTTGGGCTAGCCTCTaGAACAGCAAACTTATAGGC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNLWASL*NSKLIG
Trigger: GCCTATAAGTTTGCTGTTTCAGAGGCTAGCCCAAAG...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACCAGTCTGTGAAGGGGTaGGCCCTAAGAAATACATCT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNQSVKG*ALRNTS
Trigger: AGATGTATTTCTTAGGGCTCACCCCTTCACAGACTG...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACAGCTCTTTCCAGCAGTaGGAACTTGGAAAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHSSFQQ*ELGKVD
Trigger: GTCTACCTTTCCAAGTTCTCACTGCTGGAAAGAGCT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CCAGGGCTTCTGATGCAGAAGTGGGGCCTGATTCTGATTCCAGGATGGGTCCATCTGATCTTGAACTTCTaGCCTAAAGTGATCTACCCG +
Preference number: 4 (lower is better)
Translates to: PGLLMQKWGLILIPGWVHLILNF*PKVIYP
Trigger: CGGGTAGATCACTTTAGGTCAGAAGTTCAAGATCAG...ATGGACCCATCCTGGAATCAGAATCAGGCCCCACTTCTGCATCAGAAGCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR TCA 90 bp ATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTCGCCATTACCATTGATTCTTTCTCCATaGACACACTGCTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ILPSSSCAAHRTGHSPLPLILSP*THCCSA
Trigger: GGCTGAGCAGCAGTGTGTTCATGGAGAAAGAATCAA...TGGTAATGGCGAGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR GCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGCCTCGATGGAATTGTaGAAGACCTCTTCAAAGCGT +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHASMEL*KTSSKR
Trigger: ACGCTTTGAAGAGGTCTTGCACAATTCCATCGAGGC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGCAGAGGCGCCGTACTaGTCGTATGCCCGTGAGACA +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTAEAPY*SYARET
Trigger: TGTCTCACGGGCATACGAGCAGTACGGCGCCTCTGC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGGTCCAGATTTTGGGTaGTGGAATCCGCAATGGAAC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSGPDFG*WNPQWN
Trigger: GTTCCATTGCGGATTCCAGCACCCAAAATCTGGACC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAGCAAAACCCCTGAATaGCACACATGGAGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSSKTPE*HTWSRV
Trigger: GACTCTGCTCCATGTGTGGCATTCAGGGGTTTTGCT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCTCTGCTTCGTCATGTaGTCTTTCTTCAGACCAAGC +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHLCFVM*SFFRPS
Trigger: GCTTGGTCTGAAGAAAGAGCACATGACGAAGCAGAG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCATCCTCGTTGTCTGTaGTGCTCAGCTTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSHPRCL*CSASQH
Trigger: ATGCTGAGAAGCTGAGCAGCACAGACAACGAGGATG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCTGAAGACAAAGTGGTaGTCCTTGGACTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSLKTKW*SLDLGM
Trigger: CATCCCCAAGTCCAAGGAGCACCACTTTGTCTTCAG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTGTACTAGGAGGGGCTaGACCTGGACAGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTCTRRG*TWTVPG
Trigger: CCCAGGGACTGTCCAGGTGCAGCCCCTCCTAGTACA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ATTACCACAGGTGTCTCACTGCTCCTTGGCACATACGGTAACTCCCAAGTGTCACAGCTGGAAAGGGTTTaGGGGGCCATTTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ITTGVSLLLGTYGNSQVSQLERV*GAICFQ
Trigger: CTGGAAACAAATGGCCCCCCAAACCCTTTCCAGCTG...TGACACTTGGGAGTTACCGTATGTGCCAAGGAGCAGTGAGACACCTGTGGTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp GTCTCCGCATTTGTAAAACCAGGTGAAGCGGTGAAGCTATCAAATCCTCTCGGGGGCAAAACCCGTCTGTaGTACAGCATCCTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: VSAFVKPGEAVKLSNPLGGKTRL*YSILQA
Trigger: TGCCTGAAGGATGCTGTACCACAGACGGGTTTTGCC...CCCGAGAGGATTTGATAGCTTCACCGCTTCACCTGGTTTTACAAATGCGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp ATTGCTCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTGGCAAAACCCGTCTGTaGTACAGCATCCTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: IAPKFYHPPAVQPIGQVTGKTRL*YSILQA
Trigger: TGCCTGAAGGATGCTGTACCACAGACGGGTTTTGCC...AGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGGAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp ATTACCACAGGTGTCTCACTGCTCCTTGGCACATACGGTAACTCCCAAGTGTCACATCCATGGGCTCGTTaGAAATGGAGACAAGGCGCA +
Preference number: 4 (lower is better)
Translates to: ITTGVSLLLGTYGNSQVSHPWAR*KWRQGA
Trigger: TGCGCCTTGTCTCCATTTCCAACGAGCCCATGGATG...TGACACTTGGGAGTTACCGTATGTGCCAAGGAGCAGTGAGACACCTGTGGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGTGGCCATTGTCATCTaGCAAGAACCTCTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNVAIVI*QEPLVN
Trigger: GTTGACAAGAGGTTCTTGCCAGATGACAATGGCCAC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGGGGTGATCAGAAGCTaGTCCTGCCTGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTGVIRS*SCLLSS
Trigger: GGAGCTCAGCAGGCAGGACCAGCTTCTGATCACCCC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp ACCGCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGCGGAGATGGGCTGGATaGCAGAGGCGCCGTACTGCT +
Preference number: 4 (lower is better)
Translates to: TAPKHHWVPSFGLLIQKKRRWAG*QRRRTA
Trigger: AGCAGTACGGCGCCTCTGCCATCCAGCCCATCTCCG...CTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGTCAATGTCACCCTCTaGACAGAGGGTGCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVVNVTL*TEGAKE
Trigger: TTCTTTAGCACCCTCTGTCCAGAGGGTGACATTGAC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGAGGCTACAGTCGGGCTaGGGCGTCGGCCCGGGACTG +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKRLQSG*GVGPGL
Trigger: CAGTCCCGGGCCGACGCCCCAGCCCGACTGTAGCCT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGCGAACAAATCAGGCTaGCATCTTCATACTTCGGGT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNANKSG*HLHTSG
Trigger: ACCCGAAGTATGAAGATGCCAGCCTGATTTGTTCGC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACATGATGAAGTGCAGCTaGATCTCCTCTCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHMMKCS*ISSPSM
Trigger: CATGCTAGGAGAGGAGATCCAGCTGCACTTCATCAT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGATGATGAAGTGCAGCTaGATCTCCTCTCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVMMKCS*ISSPSM
Trigger: CATGCTAGGAGAGGAGATCCAGCTGCACTTCATCAT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGTTAAAGAGTGGGGCCTaGAGCTCACATAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVLKSGA*SSHSKQ
Trigger: CTGTTTGCTATGTGAGCTCCAGGCCCCACTCTTTAA...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGGCTGGCCCAGAACTTaGGAGTCTCAAGTTTTCATT +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVGWPRT*ESQVFI
Trigger: AATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGGCTGGCCCAGAACTTaGGAGTCTCAAGTTTTCATT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNGWPRT*ESQVFI
Trigger: AATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACAATCAGGTTTGTCCATaGAAGCACACGAATGGCAGG +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHNQVCP*KHTNGR
Trigger: CCTGCCATTCGTGTGCTTCCATGGACAAACCTGATT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAAAATTAGCTGGGCATaGTGGTGGGCGCCCATAATC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSKISWA*WWAPII
Trigger: GATTATGGGCGCCCACCACCATGCCCAGCTAATTTT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CCATGTTCTTCCCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATCTGCCCCCTCTGGCCTTaGCCCAAAGAAGAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: PCSSPTTHCPLLLQNSTICPLWP*PKEEQD
Trigger: ATCCTGCTCTTCTTTGGGCCAAGGCCAGAGGGGGCA...GATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGGGAAGAACATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389825.7
3UTR CAA 72 bp CTTCAAGTTATGGGCCACTTCAAAAACAGTGTGGCATaGAGGGTAGGCAAGTGGGAGAAGGGAGACCTGGAC +
Preference number: 4 (lower is better)
Translates to: LQVMGHFKNSVA*RVGKWEKGDLD
Trigger: GTCCAGGTCTCCCTTCTCCCACTTGCCTACCCTCAATGCCACACTGTTTTTGAAGTGGCCCATAACTTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CATATAGAACGTTACTTCCTTCGCCTAAATTCTCAAAGGTGGATTTACAGAACCGCAGGCTGGGGGACTTaGCCCCCACGAGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: HIERYFLRLNSQRWIYRTAGWGT*PPRGES
Trigger: GCTTTCTCCTCGTGGGGGTCAAGTCCCCCAGCCTGC...GGTTCTGTAAATCCACCTTTGAGAATTTAGGCGAAGGAAGTAACGTTCTATATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCCACCACTGGAAAGGTaGCTGAAGCTGGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTPPLER*LKLVPP
Trigger: TGGTGGGACCAGCTTCAGTCACCTTTCCAGTGGTGG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTACACCGGTGTCCCACTaGCATCCAGGGATGCTGCTT +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTTPVSH*HPGMLL
Trigger: AAGCAGCATCCCTGGATGTCAGTGGGACACCGGTGT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTTTTTTCCTAATGCAGTaGCCATGGCCTCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSFFLMQ*PWPQRS
Trigger: GCTCCTTTGAGGCCATGGTCACTGCATTAGGAAAAA...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGTCCTCTGGCCGGTCCTaGGGCTACAGTCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKSSGRS*GYSRAG
Trigger: CCCAGCCCGACTGTAGCCTCAGGACCGGCCAGAGGA...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTATGTCATGGTCTTGCTaGGCAGGGGGCGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTMSWSC*AGGGKS
Trigger: GCTCTTTCCGCCCCCTGCTCAGCAAGACCATGACAT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGCAGGGCGTAGTGCATaGTGTCGGGGGCCGCCTCGA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKAGRSA*CRGPPR
Trigger: TCGAGGCGGCCCCCGACATCATGCACTACGCCCTGC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTTCCTCTCTAGTCAAGTaGGATTCTTCCCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSSSLVK*DSSLRN
Trigger: GTTCCTCAGGGAAGAATCTCACTTGACTAGAGAGGA...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTAGGCAGAGGTTGCAGTaGGCCGAGGTCATTGCACCA +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTRQRLQ*AEVIAP
Trigger: TGGTGCAATGACCTCGGCTCACTGCAACCTCTGCCT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCAACAGGTTATTCTTTaGCAGTTGTTGGCACTTCGG +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVQQVIL*QLLALR
Trigger: CCGAAGTGCCAACAACTGGCAAAGAATAACCTGTTG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACCAACAGGTTATTCTTTaGCAGTTGTTGGCACTTCGG +
Preference number: 4 (lower is better)
Translates to: WGTGHVLKDTASQGLAKHQQVIL*QLLALR
Trigger: CCGAAGTGCCAACAACTGGCAAAGAATAACCTGTTG...GTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp CCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTCGCCATCAACAGGTTATTCTTTaGCAGTTGTTGGCACTTCGG +
Preference number: 4 (lower is better)
Translates to: PKFYHPPAVQPIGQVTRHQQVIL*QLLALR
Trigger: CCGAAGTGCCAACAACTGGCAAAGAATAACCTGTTG...ATGGCGAGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR GCA 90 bp TTCTCAAAGGTGGATTTACAGAACCAGCTACTACATATCATCAGATTGCTTCCCCCCACCAAGCCAACCTaGGGCACGCAGGACATGCCT +
Preference number: 4 (lower is better)
Translates to: FSKVDLQNQLLHIIRLLPPTKPT*GTQDMP
Trigger: AGGCATGTCCTGCGTGCCGCAGGTTGGCTTGGTGGG...GGGAAGCAATCTGATGATATGTAGTAGCTGGTTCTGTAAATCCACCTTTGAGAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR GCA 90 bp GAGCACCACCGTTTACTTAGCAAGGTCTCTATTGTGGATTCTCTTATTTCTTCCGCAGAGGCGCCGTACTaGTCGTATGCCCGTGAGACA +
Preference number: 4 (lower is better)
Translates to: EHHRLLSKVSIVDSLISSAEAPY*SYARET
Trigger: TGTCTCACGGGCATACGAGCAGTACGGCGCCTCTGC...GGAAGAAATAAGAGAATCCACAATAGAGACCTTGCTAAGTAAACGGTGGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGACTGACATCCAGGGATaGTGCTTTAGTGACAGAAGA +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVTDIQG*CFSDRR
Trigger: TCTTCTGTCACTAAAGCAGCATCCCTGGATGTCAGT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTTACTGTTCCACCCTCTaGTTCGTCATGTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSYCSTL*FVMCSF
Trigger: GAAAGAGCACATGACGAAGCAGAGGGTGGAACAGTA...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGGCCCTCGGCCCGGTTaGCGTAGTCCATGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKGPRPG*RSPCGW
Trigger: CCAGCCACATGGACTACGGCAACCGGGCCGAGGGCC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGGACAGTCTCATCCGTaGCGTCTGACGCCGCACATA +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTGQSHP*RLTPHI
Trigger: TATGTGCGGCGTCAGACGGCACGGATGAGACTGTCC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCGCTGGCCCGGGTCTTaGTGGACCACTTCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKRWPGS*WTTSAG
Trigger: GCCTGCGGAAGTGGTCCAGCAAGACCCGGGCCAGCG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCGAGGAACGTGTGCTTaGTGTCCGGGGCACAGATGT +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTRGTCA*CPGHRC
Trigger: ACATCTGTGCCCCGGACAGCAAGCACACGTTCCTCG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp GGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCGTTCTCAAAGACACTaGTTCTCAAGGGCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: GHVLKDTASQGLAKHLLVRSQRH*FSRACQ
Trigger: TTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACG...CACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp TTCATTCTGAGGACAGCCCTCAGAGGTGGAATTGCCCAGGTCGGGTTCAAATATTATATGCAGATGTCCTaGTGGGCTCGGGGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: FILRTALRGGIAQVGFKYYMQMS*WARGVK
Trigger: CTTTACTCCCCGAGCCCAGCAGGACATCTGCATATA...ATATTTGAACCCGACCTGGGCAATTCCACCTCTGAGGGCTGTCCTCAGAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp GTGCCACCCAGGGCTTCTGATGCAGAAGTGGGGCCTGATTCTGATTCCAGGATGGTCTTCTGTTTAAAATaGCATCTCAGATTCGGTGCA +
Preference number: 4 (lower is better)
Translates to: VPPRASDAEVGPDSDSRMVFCLK*HLRFGA
Trigger: TGCACCGAATCTGAGATGCCATTTTAAACAGAAGAC...CATCCTGGAATCAGAATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp GTGGATTTACAGAACCAGCTACTACATATCATCAGATTGCTTCCCAAGAGCCTGAGGTCCTTCCCGGCCTaGCAAAACCCGTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: VDLQNQLLHIIRLLPKSLRSFPA*QNPSVV
Trigger: TACCACAGACGGGTTTTGCCAGGCCGGGAAGGACCT...CAGGCTCTTGGGAAGCAATCTGATGATATGTAGTAGCTGGTTCTGTAAATCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGTGGCCATTGTCATCTaGCAAGAACCTCTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSVAIVI*QEPLVN
Trigger: GTTGACAAGAGGTTCTTGCCAGATGACAATGGCCAC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp GGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCAAGAAGAGCATTGTaGCCATTGTCATCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GHVLKDTASQGLAKHLLVPRRAL*PLSSGK
Trigger: CTTGCCAGATGACAATGGCCACAATGCTCTTCTTGG...CACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp CCATGTTCTTCCCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATCAACTGGAACAAGTACTaGCGGGGATCTGCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: PCSSPTTHCPLLLQNSTINWNKY*RGSAGF
Trigger: GAAGCCGGCAGATCCCCGCCAGTACTTGTTCCAGTT...GATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGGGAAGAACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp TCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTCGCCATTCTTTGCCAGTTGTTaGCACTTCGGGGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: SKILPSSSCAAHRTGHSPFFASC*HFGESL
Trigger: CAAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAA...TGGCGAGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp ACCGCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGCTGTTCCCACCACCTTaGGGGCAGCCACCATCTGGA +
Preference number: 4 (lower is better)
Translates to: TAPKHHWVPSFGLLIQKKLFPPP*GQPPSG
Trigger: TCCAGATGGTGGCTGCCCCCAAGGTGGTGGGAACAG...CTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp GCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGATGGCATCTCCTCGGAGATaGGCTGGATGGCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: APKHHWVPSFGLLIQKKMASPRR*AGWQRR
Trigger: GCGCCTCTGCCATCCAGCCCATCTCCGAGGAGATGC...CATCTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCCAGATTTTGGGTGCTaGAATCCGCAATGGAACACA +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSPDFGC*NPQWNT
Trigger: TGTGTTCCATTGCGGATTCCAGCACCCAAAATCTGG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCAAGAAGACAATGGGTaGCTGGCGGCAGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTQEDNG*LAAGLG
Trigger: ACCAAGGCCTGCCGCCAGCCACCCATTGTCTTCTTG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTACCTTGGATGTGATGTaGAAGGACCTGTGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTTLDVM*KDLWPP
Trigger: GGGCGGCCACAGGTCCTTCCACATCACATCCAAGGT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTAGCACTGGGTGGTCATaGTTCTTCAGGGACAGCGGG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTSTGWS*FFRDSG
Trigger: CCCGCTGTCCCTGAAGAACCATGACCACCCAGTGCT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACCCAGCAGTGAGAACTTaGAAAGGTAGACTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNPAVRT*KGRLFA
Trigger: TGCAAAGAGTCTACCTTTCCAAGTTCTCACTGCTGG...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGATTGGAGAATTCCGTaGAGTAACAGAAGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHDWRIP*SNRSLS
Trigger: AGAAAGGCTTCTGTTACTTCACGGAATTCTCCAATC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp ACCGCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGGCGTTTAGTGAGGGGTaGTCAGAAGCTGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: TAPKHHWVPSFGLLIQKKAFSEG*SEAGPA
Trigger: GGCAGGACCAGCTTCTGATCACCCCTCACTAAACGC...CTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR TCA 90 bp TGTTCTTCCCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCGGGAATCTTTGCCGTTaGAAACAGCCGGACCCATTG +
Preference number: 4 (lower is better)
Translates to: CSSPTTHCPLLLQNSTILGNLCR*KQPDPL
Trigger: CAATGGGTCCGGCTGTTTTCAACGGCAAAGATTCCC...GAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGGGAAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTGGGACTGCCCAGGATaGTCTCAAAGTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTWDCPG*SQSAPP
Trigger: TGGAGGAGCACTTTGAGATCATCCTGGGCAGTCCCA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTCTCCCCAGCAGAGTTaGCATCCACCACGTTCCACA +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTSPQQS*HPPRST
Trigger: TGTGGAACGTGGTGGATGTCAACTCTGCTGGGGAGA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTCCGGTCCTGACAGATaGCACACAACGTCGCACCTT +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTSGPDR*HTTSHL
Trigger: AAGGTGCGACGTTGTGTGTCATCTGTCAGGACCGGA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTCGCCAACAAGATGTGCGCTTTaGTTCTTTCTCCATGAACAC +
Preference number: 4 (lower is better)
Translates to: SKILPSSSCAAHRTGHSPTRCAL*FFLHEH
Trigger: GTGTTCATGGAGAAAGAATCAAAGCGCACATCTTGT...TGGCGAGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR TCA 90 bp ATTACCACAGGTGTCTCACTGCTCCTTGGCACATACGGTAACTCCCAAGTGTCACACTCGGCTACCACCTaGACTCACTTTGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: ITTGVSLLLGTYGNSQVSHSATT*THFVVF
Trigger: GAAAACAACAAAGTGAGTTCAGGTGGTAGCCGAGTG...TGACACTTGGGAGTTACCGTATGTGCCAAGGAGCAGTGAGACACCTGTGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR GCA 90 bp GTGGATTTACAGAACCAGCTACTACATATCATCAGATTGCTTCCCAAGAGCCTGGCATCTCAGATTCGGTaGAAAAGCCTGGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: VDLQNQLLHIIRLLPKSLASQIR*KSLAPR
Trigger: GCGTGGAGCCAGGCTTTTGCACCGAATCTGAGATGC...CAGGCTCTTGGGAAGCAATCTGATGATATGTAGTAGCTGGTTCTGTAAATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR GCA 90 bp GAGCACCACCGTTTACTTAGCAAGGTCTCTATTGTGGATTCTCTTATTTCTTCCGAGCTCCCATCAGGATaGTGGGGTTCGTCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: EHHRLLSKVSIVDSLISSELPSG*WGSSQE
Trigger: TTCCTGGGACGAACCCCAGCATCCTGATGGGAGCTC...GGAAGAAATAAGAGAATCCACAATAGAGACCTTGCTAAGTAAACGGTGGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTATCAGAAGCTGGTCCTaGCTGCTGAGCTCCCATCAG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTIRSWS*LLSSHQ
Trigger: CTGATGGGAGCTCAGCAGGCAGGACCAGCTTCTGAT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGAGCGCAGGAAGATCTaGTCCAGGTCCTCCATCAAG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTERRKI*SRSSIK
Trigger: CTTGATGGAGGACCTGGAGCAGATCTTCCTGCGCTC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGTGCTGTGTCTGCAGTaGATACGGGAAGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTVLCLQ*IREGGH
Trigger: GTGACCTCCTTCCCGTATGCACTGCAGACACAGCAC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACACATCCTCAATTTTCTaGCACATCCTGAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNTSSIF*HILSCF
Trigger: AAAGCAGCTCAGGATGTGGCAGAAAATTGAGGATGT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCTCTCCCTGGGGGAGTaGTGTGGGCTGAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKLSLGE*CGLSRG
Trigger: TCCTCGGCTCAGCCCACAGCACTCCCCCAGGGAGAG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGTAAGTGTTGTACGCTaGGTACTTGGACAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSVSVVR*VLGQSH
Trigger: ATGAGACTGTCCAAGTACGCAGCGTACAACACTTAC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGGGGCCGCCTCGATGTaGTGCATGATGTGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTGAASM*CMMCFK
Trigger: TTTGAAGCACATCATGCAGCACATCGAGGCGGCCCC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCGGTTCTGGTTGTACTaGACGTTCTGGGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTRFWLY*TFWVRS
Trigger: GGACCTGACCCAGAACGTGCAGTACAACCAGAACCG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCAGGTCCTCAAGAGCTaGAAGCCTTCCATTGAAAAA +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSQVLKS*KPSIEK
Trigger: TTTTTCAATGGAAGGCTTGCAGCTCTTGAGGACCTG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381486.7
CDS-3UTR GCA 90 bp AACACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCCACACTGCCCACTATTaGTCCAAAATTCTACCATCC +
Preference number: 4 (lower is better)
Translates to: NTLPTIAPKFYHPPAVQPHTAHY*SKILPS
Trigger: GGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTG...GGGCTGCACAGCTGGAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp TTCTCAAAGGTGGATTTACAGAACCAGCTACTACATATCATCAGATTGCTTCCCTGGGCACCAGGTTGTTaGACCGCAGGGATGCCTCGA +
Preference number: 4 (lower is better)
Translates to: FSKVDLQNQLLHIIRLLPWAPGC*TAGMPR
Trigger: TCGAGGCATCCCTGCGGTCCAACAACCTGGTGCCCA...GGGAAGCAATCTGATGATATGTAGTAGCTGGTTCTGTAAATCCACCTTTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTACAGCTGGGAAAAGATaGGCCTGGGCACCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTTAGKR*AWAPGC
Trigger: ACAACCTGGTGCCCAGGCCCATCTTTTCCCAGCTGT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp GTGGATTTACAGAACCAGCTACTACATATCATCAGATTGCTTCCCAAGAGCCTGACAGCTGGGAAAAGATaGGCCTGGGCACCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: VDLQNQLLHIIRLLPKSLTAGKR*AWAPGC
Trigger: ACAACCTGGTGCCCAGGCCCATCTTTTCCCAGCTGT...CAGGCTCTTGGGAAGCAATCTGATGATATGTAGTAGCTGGTTCTGTAAATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp ACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATACCAAGAAGAGCATTGTaGCCATTGTCATCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: TLPTIAPKFYHPPAVQPIPRRAL*PLSSGK
Trigger: CTTGCCAGATGACAATGGCCACAATGCTCTTCTTGG...TATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp CCAAACACTTGCTGGTGCCACCCAGGGCTTCTGATGCAGAAGTGGGGCCTGATTGCTTCTTGGGTTGAGTaGTCAGTTTCAGATTTATAT +
Preference number: 4 (lower is better)
Translates to: PNTCWCHPGLLMQKWGLIASWVE*SVSDLY
Trigger: ATATAAATCTGAAACTGACCACTCAACCCAAGAAGC...AATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTAACTGGAACAAGTACTaGCGGGGATCTGCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCVLSCTPGTPFNWNKY*RGSAGF
Trigger: GAAGCCGGCAGATCCCCGCCAGTACTTGTTCCAGTT...AAATGGAGTACCTGGAGTACAAGATAACACACACACACACACACACACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp ATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCCAGGAACGGGCTCGCTaGGGAAGGCAGCCGTGCTCT +
Preference number: 4 (lower is better)
Translates to: IAAMIVSINFGSCILSLTQERAR*GRQPCS
Trigger: AGAGCACGGCTGCCTTCCCCAGCGAGCCCGTTCCTG...GGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACAGTGTATGCGGGTTCTaGAAGGAGTTTTGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHSVCGF*KEFCRK
Trigger: TTTTCTGCAAAACTCCTTCCAGAACCCGCATACACT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAGATCCCAGTGCGCATaGTCATGGATTAGGACAAAA +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSRSQCA*SWIRTK
Trigger: TTTTGTCCTAATCCATGACCATGCGCACTGGGATCT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTGTACGCTGCGTACTTaGACAGTCTCATCCGTGCCG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTCTLRT*TVSSVP
Trigger: CGGCACGGATGAGACTGTCCAAGTACGCAGCGTACA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCAAAGGCGTGCAGGGTaGACTCATACAGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTQRRAG*THTAGS
Trigger: GCTACCAGCTGTATGAGTCCACCCTGCACGCCTTTG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTAGCTGGCCTCCAGGTTaGCTGAAGACAAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTSWPPG*LKTKWC
Trigger: GCACCACTTTGTCTTCAGCCAACCTGGAGGCCAGCT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGTTCTCCAGCAGGAGCTaGGCGGGCGCTGCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKFSSRS*AGAARN
Trigger: GTTCCTCGCAGCGCCCGCCCAGCTCCTGCTGGAGAA...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTAGTCACCAAAAATATGGGGCTCCCGCCTCCTaGGCTGCGCCTTTGATCTGT +
Preference number: 4 (lower is better)
Translates to: CVCVLSCTPGTPFSHQKYGAPAS*AAPLIC
Trigger: ACAGATCAAAGGCGCAGCCCAGGAGGCGGGAGCCCC...ATATTTTTGGTGACTAAATGGAGTACCTGGAGTACAAGATAACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp ACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATAGGAGAGCCCTTCCTATaGGCATCAAAGTACAAGATG +
Preference number: 4 (lower is better)
Translates to: TLPTIAPKFYHPPAVQPIGEPFL*ASKYKM
Trigger: CATCTTGTACTTTGATGCCCATAGGAAGGGCTCTCC...TATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR TCA 90 bp GAGCACCACCGTTTACTTAGCAAGGTCTCTATTGTGGATTCTCTTATTTCTTCCCTGCTCGTATGCCCGTaGGACAGACTGGGAATTCTG +
Preference number: 4 (lower is better)
Translates to: EHHRLLSKVSIVDSLISSLLVCP*DRLGIL
Trigger: CAGAATTCCCAGTCTGTCTCACGGGCATACGAGCAG...GGAAGAAATAAGAGAATCCACAATAGAGACCTTGCTAAGTAAACGGTGGTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTAGACATCCACTTCTGTaGGCCGAACAAGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTRHPLL*AEQASW
Trigger: CCAGGATGCTTGTTCGGCTCACAGAAGTGGATGTCT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCAACTCCAGCACTGTTaGAGATACTGGGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTQLQHC*RYWGAP
Trigger: TGGTGCTCCCCAGTATCTTCAACAGTGCTGGAGTTG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTGTGCACCCGCAGGTTaGAGTCTACATCGTCACACA +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTCAPAG*SLHRHT
Trigger: TGTGTGACGATGTAGACTTCAACCTGCGGGTGCACA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGACCGTCTGGCGCAGTaGGCTCCGGTCCTGACAGAT +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKDRLAQ*APVLTD
Trigger: ATCTGTCAGGACCGGAGCTCACTGCGCCAGACGGTC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACATTTGTAAAACCAGGTaGAGCGGTGAAGCTATCAAA +
Preference number: 4 (lower is better)
Translates to: WGTGHVLKDTASQGLAKHICKTR*SGEAIK
Trigger: TTTGATAGCTTCACCGCTTCACCTGGTTTTACAAAT...GTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp GAGCACCACCGTTTACTTAGCAAGGTCTCTATTGTGGATTCTCTTATTTCTTCCGTACTGGCGGGGATCTaGCGGCTTCTAAACTCTGAG +
Preference number: 4 (lower is better)
Translates to: EHHRLLSKVSIVDSLISSVLAGI*RLLNSE
Trigger: CTCAGAGTTTAGAAGCCGGCAGATCCCCGCCAGTAC...GGAAGAAATAAGAGAATCCACAATAGAGACCTTGCTAAGTAAACGGTGGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR GCA 90 bp ATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCTGGGGAAGGCAGCCGTaGTCTCCAGGGCTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: IAAMIVSINFGSCILSLTWGRQP*SPGLGR
Trigger: TCTTCCCAGCCCTGGAGAGCACGGCTGCCTTCCCCA...GGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGTGGGGAAGGCAGCCGTaGTCTCCAGGGCTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKWGRQP*SPGLGR
Trigger: TCTTCCCAGCCCTGGAGAGCACGGCTGCCTTCCCCA...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTAGGATGATGAAGTTGTaGACGTGGCAGCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTRMMKL*TWQREK
Trigger: CTTCTCCCGCTGCCACGTGCACAACTTCATCATCCT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGTTCCTTTGGAATATTaGTTTGTAGGAGGTTACAGG +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVVPLEY*FVGGYR
Trigger: CCTGTAACCTCCTACAAAGCAATATTCCAAAGGAAC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AAATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTCGCCATTACCACTTTGTTGTTTTCTaGTCCAAACAAAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KFYHPPAVQPIGQVTRHYHFVVF*SKQSQR
Trigger: CCTCTGGCTTTGTTTGGAGCAGAAAACAACAAAGTG...GTAATGGCGAGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR GCA 90 bp ATGTTCTTCCCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCACAGGTGTCTCACTaGTCCTTGGCACATACGGTA +
Preference number: 4 (lower is better)
Translates to: MFFPNNTLPTIAPKFYHPPQVSH*SLAHTV
Trigger: TACCGTATGTGCCAAGGAGCAGTGAGACACCTGTGG...AGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGGGAAGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCAGCTGGAAAGGGTTTaGGGGGCCATTTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTQLERV*GAICFQ
Trigger: CTGGAAACAAATGGCCCCCCAAACCCTTTCCAGCTG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp ACCGCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGCCGCAGGGACATCCATaGGCTCGTTGGAAATGGAGA +
Preference number: 4 (lower is better)
Translates to: TAPKHHWVPSFGLLIQKKPQGHP*ARWKWR
Trigger: TCTCCATTTCCAACGAGCCCATGGATGTCCCTGCGG...CTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp GTTCTTCCCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCGTGGCCATTGTCATCTaGCAAGAACCTCTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: VLPQQHTAHYCSKILPSSVAIVI*QEPLVN
Trigger: GTTGACAAGAGGTTCTTGCCAGATGACAATGGCCAC...GGAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGGGAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACAGATTAAAGGTCCTTTaGTTAGAGTCCCTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNRLKVL*LESLVH
Trigger: ATGCACAAGGGACTCTAACCAAAGGACCTTTAATCT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp ACCGCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGAACTGGAACAAGTACTaGCGGGGATCTGCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: TAPKHHWVPSFGLLIQKKNWNKY*RGSAGF
Trigger: GAAGCCGGCAGATCCCCGCCAGTACTTGTTCCAGTT...CTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp GAGCACCACCGTTTACTTAGCAAGGTCTCTATTGTGGATTCTCTTATTTCTTCCCTGGGAAGAGGGAACTaGAACAAGTACTGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: EHHRLLSKVSIVDSLISSLGRGN*NKYWRG
Trigger: TCCCCGCCAGTACTTGTTCCAGTTCCCTCTTCCCAG...GGAAGAAATAAGAGAATCCACAATAGAGACCTTGCTAAGTAAACGGTGGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp CATATAGAACGTTACTTCCTTCGCCTAAATTCTCAAAGGTGGATTTACAGAACCGGGGTGATCAGAAGCTaGTCCTGCCTGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: HIERYFLRLNSQRWIYRTGVIRS*SCLLSS
Trigger: GGAGCTCAGCAGGCAGGACCAGCTTCTGATCACCCC...GGTTCTGTAAATCCACCTTTGAGAATTTAGGCGAAGGAAGTAACGTTCTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGGCCACTGCTGTCAGTaGACACAACCATGTCGTACA +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTGHCCQ*TQPCRT
Trigger: TGTACGACATGGTTGTGTCCACTGACAGCAGTGGCC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTGGCTGAAGACAAAGTaGTGCTCCTTGGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTWLKTK*CSLDLG
Trigger: CCCCAAGTCCAAGGAGCACCACTTTGTCTTCAGCCA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGTGACGGCCGGTGGTTaGAGTGAATGTCGGACTTTT +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTVTAGG*SECRTF
Trigger: AAAAGTCCGACATTCACTCCAACCACCGGCCGTCAC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTAAGAAGAGGTGGCTGTaGTGCTGCAGGAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTKKRWL*CCRNFS
Trigger: GGAGAAGTTCCTGCAGCACCACAGCCACCTCTTCTT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGTCGACAGACAGCACTaGGTGGTCATGGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTVDRQH*VVMVLQ
Trigger: CTGAAGAACCATGACCACCCAGTGCTGTCTGTCGAC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTTTGTTCCTCGTGAAATaGGCTTTAAAACAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSLFLVK*ALKQPR
Trigger: TCTGGGCTGTTTTAAAGCCCATTTCACGAGGAACAA...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCATCTACTGAAATACTaGCACCGCTACAAAATAACC +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVHLLKY*HRYKIT
Trigger: GGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGATG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TTCATTCTGAGGACAGCCCTCAGAGGTGGAATTGCCCAGGTCGGGTTCAAATATTTCTGCTTCTTGGGTTaGGTGGTCAGTTTCAGATTT +
Preference number: 4 (lower is better)
Translates to: FILRTALRGGIAQVGFKYFCFLG*VVSFRF
Trigger: AAATCTGAAACTGACCACTCAACCCAAGAAGCAGAA...ATATTTGAACCCGACCTGGGCAATTCCACCTCTGAGGGCTGTCCTCAGAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR TCA 90 bp CCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCAGCTGTGTTCTGCTTCTTGGGTTaGGTGGTCAGTTTCAGATTT +
Preference number: 4 (lower is better)
Translates to: PNNTLPTIAPKFYHPPAVFCFLG*VVSFRF
Trigger: AAATCTGAAACTGACCACTCAACCCAAGAAGCAGAA...CACAGCTGGAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR TCA 90 bp CATATAGAACGTTACTTCCTTCGCCTAAATTCTCAAAGGTGGATTTACAGAACCCACTGGAAAGGTGACTaGAGCTGGTCCCACCAAGCC +
Preference number: 4 (lower is better)
Translates to: HIERYFLRLNSQRWIYRTHWKGD*SWSHQA
Trigger: GGCTTGGTGGGACCAGCTTCAGTCACCTTTCCAGTG...GGTTCTGTAAATCCACCTTTGAGAATTTAGGCGAAGGAAGTAACGTTCTATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCGAGAACAAAGGTCCTaGTCACCGCGCTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKREQRS*SPRCAG
Trigger: GCCTGCACAGCGCGGTGATCAGGACCTTTGTTCTCG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGAGATGTCCTGCGGCTTaGTTCCCAGCTCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKRCPAA*FPAPPA
Trigger: GGCAGGAGGAGCTGGGAATCAAGCCGCAGGACATCT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGACAGCAGCAGCCCACTaGACAGCAAGTCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKTAAAH*TASPSS
Trigger: GCTGCTCGGACTTGCTGTTCAGTGGGCTGCTGCTGT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACTTTACCTTTGCACTTTaGGGTAAAATCCCATCTCTA +
Preference number: 4 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHFTFAL*GKIPSL
Trigger: TAGAGATGGGATTTTACCTCAAAGTGCAAAGGTAAA...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381486.7
CDS-3UTR GCA 90 bp GCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGATGTCTAGAGCGGCAAGCTaGTGCTCAGCTTCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: APKHHWVPSFGLLIQKKMSRAAS*CSASRY
Trigger: GTACCTGGAAGCTGAGCAGCAGCTTGCCGCTCTAGA...CATCTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR GCA 90 bp TTCTCAAAGGTGGATTTACAGAACCAGCTACTACATATCATCAGATTGCTTCCCATCAGAAGCTGGTCCTaGCTGCTGAGCTCCCATCAG +
Preference number: 4 (lower is better)
Translates to: FSKVDLQNQLLHIIRLLPIRSWS*LLSSHQ
Trigger: CTGATGGGAGCTCAGCAGGCAGGACCAGCTTCTGAT...GGGAAGCAATCTGATGATATGTAGTAGCTGGTTCTGTAAATCCACCTTTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTAGCAAAACCCCTGAATaGCACACATGGAGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTSKTPE*HTWSRV
Trigger: GACTCTGCTCCATGTGTGGCATTCAGGGGTTTTGCT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTTGGGGATGATGAAGTaGAGCTGGATCTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTLGMMK*SWISSP
Trigger: AGGAGAGGAGATCCAGCTGCACTTCATCATCCCCAA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGCTGGCACCGTCCATTaGGTGGTACAGATTAAAGAG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTAGTVH*VVQIKE
Trigger: CTCTTTAATCTGTACCACGCAATGGACGGTGCCAGC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp ATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTCGCCATTACCATCAAAGTACAAGATGTaGGCTTTGATTCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ILPSSSCAAHRTGHSPLPSKYKM*ALILSP
Trigger: TGGAGAAAGAATCAAAGCGCACATCTTGTACTTTGA...TGGTAATGGCGAGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp ACCGCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGCAGCTGGAAAGGGTTTaGGGGGCCATTTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TAPKHHWVPSFGLLIQKKQLERV*GAICFQ
Trigger: CTGGAAACAAATGGCCCCCCAAACCCTTTCCAGCTG...CTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp GAGCACCACCGTTTACTTAGCAAGGTCTCTATTGTGGATTCTCTTATTTCTTCCGGCAAAACCCGTCTGTaGTACAGCATCCTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: EHHRLLSKVSIVDSLISSGKTRL*YSILQA
Trigger: TGCCTGAAGGATGCTGTACCACAGACGGGTTTTGCC...GGAAGAAATAAGAGAATCCACAATAGAGACCTTGCTAAGTAAACGGTGGTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGCTTCTTGGGTTGAGTaGTCAGTTTCAGATTTATAT +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNASWVE*SVSDLY
Trigger: ATATAAATCTGAAACTGACCACTCAACCCAAGAAGC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTAGTCACCAAAAATATCTCCCATCAGGATGCTaGGGTTCGTCCCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: CVCVLSCTPGTPFSHQKYLPSGC*GSSQER
Trigger: CCGTTCCTGGGACGAACCCCAGCATCCTGATGGGAG...ATATTTTTGGTGACTAAATGGAGTACCTGGAGTACAAGATAACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp ATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCCTCCCATCAGGATGCTaGGGTTCGTCCCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: IAAMIVSINFGSCILSLTLPSGC*GSSQER
Trigger: CCGTTCCTGGGACGAACCCCAGCATCCTGATGGGAG...GGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCTGTTCCCACCACCTTaGGGGCAGCCACCATCTGGA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKLFPPP*GQPPSG
Trigger: TCCAGATGGTGGCTGCCCCCAAGGTGGTGGGAACAG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTGTCGTACACGAGCTTaGGCAAGAAGACAATGGGTG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTCRTRA*ARRQWV
Trigger: CACCCATTGTCTTCTTGCCCAAGCTCGTGTACGACA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACCTTTTTATATATTCATaGCTCTTGTCTGTCACGAGG +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNLFIYS*LLSVTR
Trigger: CCTCGTGACAGACAAGAGCCATGAATATATAAAAAG...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGCGCCGGGCAATGGGTaGCCTCTCAACTGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKAPGNG*PLNCGF
Trigger: AAAGCCACAGTTGAGAGGCCACCCATTGCCCGGCGC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGTTTTCCTTCAAGTTATaGGCCACTTCAAAAACAGTG +
Preference number: 4 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVFSFKL*ATSKTV
Trigger: CACTGTTTTTGAAGTGGCCCATAACTTGAAGGAAAA...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACTTTTCCTTCAAGTTATaGGCCACTTCAAAAACAGTG +
Preference number: 4 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNFSFKL*ATSKTV
Trigger: CACTGTTTTTGAAGTGGCCCATAACTTGAAGGAAAA...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTAAAATTAGCTGGGCATaGTGGTGGGCGCCCATAATC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTKISWA*WWAPII
Trigger: GATTATGGGCGCCCACCACCATGCCCAGCTAATTTT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp GATTCAGAAGCCCATGTTCTTCCCCAACAACACACTGCCCACTATTGCTCCAAAGATTGGAGAATTCCGTaGAGTAACAGAAGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: DSEAHVLPQQHTAHYCSKDWRIP*SNRSLS
Trigger: AGAAAGGCTTCTGTTACTTCACGGAATTCTCCAATC...TTTGGAGCAATAGTGGGCAGTGTGTTGTTGGGGAAGAACATGGGCTTCTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGCGTTTAGTGAGGGGTaGTCAGAAGCTGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKAFSEG*SEAGPA
Trigger: GGCAGGACCAGCTTCTGATCACCCCTCACTAAACGC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp ATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCCCACCACTGGAAAGGTaGCTGAAGCTGGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: IAAMIVSINFGSCILSLTPPLER*LKLVPP
Trigger: TGGTGGGACCAGCTTCAGTCACCTTTCCAGTGGTGG...GGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR TCA 90 bp TATAGAACGTTACTTCCTTCGCCTAAATTCTCAAAGGTGGATTTACAGAACCAGTGTACAAGAGGGGGCTaGCCACGACGTCATTCAGGT +
Preference number: 4 (lower is better)
Translates to: YRTLLPSPKFSKVDLQNQCTRGG*PRRHSG
Trigger: ACCTGAATGACGTCGTGGTCAGCCCCCTCTTGTACA...CTGGTTCTGTAAATCCACCTTTGAGAATTTAGGCGAAGGAAGTAACGTTCTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTTTTCTGCCACATCCTaGGCTGCTTTACGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTFSATS*AALRSA
Trigger: AGCACTTCGTAAAGCAGCTCAGGATGTGGCAGAAAA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGGCCTCCAGGTTGGCTaGAGACAAAGTGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKGLQVG*RQSGAP
Trigger: AGGAGCACCACTTTGTCTTCAGCCAACCTGGAGGCC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGGCCGGTGGTTGGAGTaGATGTCGGACTTTTTATAT +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTGRWLE*MSDFLY
Trigger: ATATAAAAAGTCCGACATTCACTCCAACCACCGGCC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTCCTCTCTAGTCAAGTaGGATTCTTCCCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTSSLVK*DSSLRN
Trigger: GTTCCTCAGGGAAGAATCTCACTTGACTAGAGAGGA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGAGGCAGAGGTTGCAGTaGGCCGAGGTCATTGCACCA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKRQRLQ*AEVIAP
Trigger: TGGTGCAATGACCTCGGCTCACTGCAACCTCTGCCT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTGCCTCGATGGAATTGTaGAAGACCTCTTCAAAGCGT +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCVLSCTPGTPFASMEL*KTSSKR
Trigger: ACGCTTTGAAGAGGTCTTGCACAATTCCATCGAGGC...AAATGGAGTACCTGGAGTACAAGATAACACACACACACACACACACACACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp TTCTCAAAGGTGGATTTACAGAACCAGCTACTACATATCATCAGATTGCTTCCCGTTGGACCGCAGGGATaGCTCGATGGAATTGTGCAA +
Preference number: 4 (lower is better)
Translates to: FSKVDLQNQLLHIIRLLPVGPQG*LDGIVQ
Trigger: TTGCACAATTCCATCGAGGCATCCCTGCGGTCCAAC...GGGAAGCAATCTGATGATATGTAGTAGCTGGTTCTGTAAATCCACCTTTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR GCA 90 bp ATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCAGAGCGGCAAGCTGCTaGTCAGCTTCCAGGTACAGC +
Preference number: 4 (lower is better)
Translates to: IAAMIVSINFGSCILSLTRAASC*SASRYS
Trigger: GCTGTACCTGGAAGCTGAGCAGCAGCTTGCCGCTCT...GGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGAGCTCCCATCAGGATaGTGGGGTTCGTCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKELPSG*WGSSQE
Trigger: TTCCTGGGACGAACCCCAGCATCCTGATGGGAGCTC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTAGTCACCAAAAATATGAGCTCCCATCAGGATaGTGGGGTTCGTCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: CVCVLSCTPGTPFSHQKYELPSG*WGSSQE
Trigger: TTCCTGGGACGAACCCCAGCATCCTGATGGGAGCTC...ATATTTTTGGTGACTAAATGGAGTACCTGGAGTACAAGATAACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGACGGTAAGCAGGAGCTaGATCTCCTCGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKTVSRS*ISSEMG
Trigger: GCCCATCTCCGAGGAGATGCAGCTCCTGCTTACCGT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGCACACTCGATGACGTaGACGCTGTCGTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKAHSMT*TLSLQE
Trigger: CTCCTGCAACGACAGCGTGCACGTCATCGAGTGTGC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGTGGTCTTGGCAAGCTTaGCCTCGACCAACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKWSWQA*PRPTAG
Trigger: TCCGGCTGTTGGTCGAGGGCAAGCTTGCCAAGACCA...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCTCTGCTTCGTCATGTaGTCTTTCTTCAGACCAAGC +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTLCFVM*SFFRPS
Trigger: GCTTGGTCTGAAGAAAGAGCACATGACGAAGCAGAG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCCTTGGGCAGGCCACTaGTGTCAGTGGACACAACCA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKPWAGH*CQWTQP
Trigger: TGGTTGTGTCCACTGACAGCAGTGGCCTGCCCAAGG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGGACAGTCTCATCCGTaGCGTCTGACGCCGCACATA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKGQSHP*RLTPHI
Trigger: TATGTGCGGCGTCAGACGGCACGGATGAGACTGTCC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCCAGGAGGCAGAGGTTaGAGTGAGCCGAGGTCATTG +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKPGGRG*SEPRSL
Trigger: CAATGACCTCGGCTCACTGCAACCTCTGCCTCCTGG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCCAAGAAGAGCATTGTaGCCATTGTCATCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTPRRAL*PLSSGK
Trigger: CTTGCCAGATGACAATGGCCACAATGCTCTTCTTGG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCTTTTTATATATTCATaGCTCTTGTCTGTCACGAGG +
Preference number: 4 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSLFIYS*LLSVTR
Trigger: CCTCGTGACAGACAAGAGCCATGAATATATAAAAAG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTTAAAGAGTGGGGCCTaGAGCTCACATAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTLKSGA*SSHSKQ
Trigger: CTGTTTGCTATGTGAGCTCCAGGCCCCACTCTTTAA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGGTCTTCCCTGGCATTaGCGGTCTGGAACTCATCGC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKGLPWH*RSGTHR
Trigger: GCGATGAGTTCCAGACCGCCAATGCCAGGGAAGACC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTACAGGGGAACCTACTTaGCTGAAATCCCATCTACTG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTTGEPT*LKSHLL
Trigger: CAGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR CAA 72 bp GAATATTGCTTTGTAGGAGGTTACAGGGGAACCTACTaGGCTGAAATCCCATCTACTGAAATACTGGCACCG +
Preference number: 4 (lower is better)
Translates to: EYCFVGGYRGTY*AEIPSTEILAP
Trigger: CGGTGCCAGTATTTCAGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TTCTCAAAGGTGGATTTACAGAACCAGCTACTACATATCATCAGATTGCTTCCCACGCAAGGTAGAAGGTaGAACAGCTGCAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: FSKVDLQNQLLHIIRLLPTQGRR*NSCKEE
Trigger: TTCCTCCTTGCAGCTGTTTCACCTTCTACCTTGCGT...GGGAAGCAATCTGATGATATGTAGTAGCTGGTTCTGTAAATCCACCTTTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGAGTAAGCACACTCGATaGCGTGCACGCTGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKSKHTR*RARCRC
Trigger: GCAACGACAGCGTGCACGTCATCGAGTGTGCTTACT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGAGGAGCTATCGTATCTaGGCAAGGGGAGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKRSYRI*ARGGCV
Trigger: GACACAGCCTCCCCTTGCTCAGATACGATAGCTCCT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGCAAGTCCGAGCAGCTaGTGTTTAAAGAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKASPSS*CLKSGA
Trigger: GGCCCCACTCTTTAAACATCAGCTGCTCGGACTTGC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGAGTGAGCTCCGGTCCTaGCAGATGACACACAACGTC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKSELRS*QMTHNV
Trigger: GACGTTGTGTGTCATCTGTCAGGACCGGAGCTCACT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TATAGAACGTTACTTCCTTCGCCTAAATTCTCAAAGGTGGATTTACAGAACCAGTGCTTCCCAAGAGCCTaGATGCGTCAGTTTACCACG +
Preference number: 4 (lower is better)
Translates to: YRTLLPSPKFSKVDLQNQCFPRA*MRQFTT
Trigger: CGTGGTAAACTGACGCATTCAGGCTCTTGGGAAGCA...CTGGTTCTGTAAATCCACCTTTGAGAATTTAGGCGAAGGAAGTAACGTTCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGTCTAGAGCGGCAAGCTaGTGCTCAGCTTCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKSRAAS*CSASRY
Trigger: GTACCTGGAAGCTGAGCAGCAGCTTGCCGCTCTAGA...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTAGTCACCAAAAATATGTACTGGCGGGGATCTaGCGGCTTCTAAACTCTGAG +
Preference number: 4 (lower is better)
Translates to: CVCVLSCTPGTPFSHQKYVLAGI*RLLNSE
Trigger: CTCAGAGTTTAGAAGCCGGCAGATCCCCGCCAGTAC...ATATTTTTGGTGACTAAATGGAGTACCTGGAGTACAAGATAACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp AATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACACGGTAAGCAGGAGCTaGATCTCCTCGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: NSCNDCQYKLWVLHSFLNTVSRS*ISSEMG
Trigger: GCCCATCTCCGAGGAGATGCAGCTCCTGCTTACCGT...GTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGAGTCCACTCCATTACTaGAGGAGGCAGGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKSPLHY*RRQASG
Trigger: TCCACTGGCCTGCCTCCTGCAGTAATGGAGTGGACT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGAGCTGCTTTACGAAGTaGTTCCCCACGGTGACGCCT +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKSCFTK*FPTVTP
Trigger: AGGCGTCACCGTGGGGAAGCACTTCGTAAAGCAGCT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp AATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACGGGAAAAGATGGGCCTaGGCACCAGGTTGTTGGACC +
Preference number: 4 (lower is better)
Translates to: NSCNDCQYKLWVLHSFLNGKRWA*APGCWT
Trigger: GGTCCAACAACCTGGTGCCCAGGCCCATCTTTTCCC...GTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp ATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCTGGGCTCGTTGGAAATaGAGACAAGGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: IAAMIVSINFGSCILSLTWARWK*RQGAGP
Trigger: AGGACCTGCGCCTTGTCTCCATTTCCAACGAGCCCA...GGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCCGCAGGGACATCCATaGGCTCGTTGGAAATGGAGA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKPQGHP*ARWKWR
Trigger: TCTCCATTTCCAACGAGCCCATGGATGTCCCTGCGG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGAACTGGAACAAGTACTaGCGGGGATCTGCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKNWNKY*RGSAGF
Trigger: GAAGCCGGCAGATCCCCGCCAGTACTTGTTCCAGTT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGTCAGGAACAGACACTaGTTCTCCAGAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKVRNRH*FSRGHH
Trigger: GTGGTGGCCTCTGGAGAACCAGTGTCTGTTCCTGAC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGAGCTGGCCTCCAGGTTaGCTGAAGACAAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKSWPPG*LKTKWC
Trigger: GCACCACTTTGTCTTCAGCCAACCTGGAGGCCAGCT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGATGAAGTTGTGCACGTaGCAGCGGGAGAAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKMKLCT*QREKGS
Trigger: AGAGCCCTTCTCCCGCTGCCACGTGCACAACTTCAT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCCAGCAGTGAGAACTTaGAAAGGTAGACTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTPAVRT*KGRLFA
Trigger: TGCAAAGAGTCTACCTTTCCAAGTTCTCACTGCTGG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTAGTCACCAAAAATATTTGCCAAACACTTGCTaGTGCCACCCAGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: CVCVLSCTPGTPFSHQKYLPNTC*CHPGLL
Trigger: CAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAA...ATATTTTTGGTGACTAAATGGAGTACCTGGAGTACAAGATAACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp GAGCACCACCGTTTACTTAGCAAGGTCTCTATTGTGGATTCTCTTATTTCTTCCGGAGAGCCCTTCCTATaGGCATCAAAGTACAAGATG +
Preference number: 4 (lower is better)
Translates to: EHHRLLSKVSIVDSLISSGEPFL*ASKYKM
Trigger: CATCTTGTACTTTGATGCCCATAGGAAGGGCTCTCC...GGAAGAAATAAGAGAATCCACAATAGAGACCTTGCTAAGTAAACGGTGGTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
3UTR CAA 72 bp GTGGATTTACAGAACCAGCTACTACATATCATCAGATaGCTTCCCAAGAGCCTGAATGCGTCAGTTTACCAC +
Preference number: 4 (lower is better)
Translates to: VDLQNQLLHIIR*LPKSLNASVYH
Trigger: GTGGTAAACTGACGCATTCAGGCTCTTGGGAAGCAATCTGATGATATGTAGTAGCTGGTTCTGTAAATCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCAACTCCAGCACTGTTaGAGATACTGGGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKQLQHC*RYWGAP
Trigger: TGGTGCTCCCCAGTATCTTCAACAGTGCTGGAGTTG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGTGTGCACCCGCAGGTTaGAGTCTACATCGTCACACA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKCAPAG*SLHRHT
Trigger: TGTGTGACGATGTAGACTTCAACCTGCGGGTGCACA...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp ATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCTCCGGATTTCGTATTTaGTGTGCCAGCTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: IAAMIVSINFGSCILSLTSGFRI*CASWTR
Trigger: CCTGGTCCAGCTGGCACATCAAATACGAAATCCGGA...GGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCACGCAGGACATGCCTaGGCTCTCATACTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKHAGHA*ALILSS
Trigger: AGAGCTAAGTATGAGAGCGCAGGCATGTCCTGCGTG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp ATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCATGACCCTACACGCAGGACATGCCTaGGCTCTCATACTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: MIVSINFGSCILSLTMTLHAGHA*ALILSS
Trigger: AGAGCTAAGTATGAGAGCGCAGGCATGTCCTGCGTG...TAGGGTCATGGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCCAAGGGAACCTCGTTaGTCACAAAGTAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKPREPR*SQSRQP
Trigger: TGGCTGCCTACTTTGTGAGCAACGAGGTTCCCTTGG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGCCGCCTCGATGTGCTaGATGATGTGCTTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKAASMC*MMCFKD
Trigger: GTCTTTGAAGCACATCATGCAGCACATCGAGGCGGC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGAAGGGAGACCTGGACTaGAGAGTCCAGAAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKKGDLD*RVQKPE
Trigger: TTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TTCCCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCAGCTGCTTCTTGGGTTGAGTaGTCAGTTTCAGATTTATAT +
Preference number: 4 (lower is better)
Translates to: FPNNTLPTIAPKFYHPPAASWVE*SVSDLY
Trigger: ATATAAATCTGAAACTGACCACTCAACCCAAGAAGC...AGCTGGAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp CCCATGTTCTTCCCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATAGATTAAAGGTCCTTTaGTTAGAGTCCCTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: PMFFPNNTLPTIAPKFYHRLKVL*LESLVH
Trigger: ATGCACAAGGGACTCTAACCAAAGGACCTTTAATCT...ATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGGGAAGAACATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CCA 90 bp AATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACGTCAGGAACAGACACTaGTTCTCCAGAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: NSCNDCQYKLWVLHSFLNVRNRH*FSRGHH
Trigger: GTGGTGGCCTCTGGAGAACCAGTGTCTGTTCCTGAC...GTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCCCAGGTCCAGATTTTaGGTGCTGGAATCCGCAATG +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKPRSRF*VLESAM
Trigger: CATTGCGGATTCCAGCACCCAAAATCTGGACCTGGG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTAGTGTATGCGGGTTCTaGAAGGAGTTTTGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTSVCGF*KEFCRK
Trigger: TTTTCTGCAAAACTCCTTCCAGAACCCGCATACACT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCAGTGCGCATGGTCATaGATTAGGACAAAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTQCAWS*IRTKSV
Trigger: TACACTTTTTGTCCTAATCCATGACCATGCGCACTG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGTTGTACTGCACGTTCTaGGTCAGGTCCACGTTCAGG +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKLYCTF*VRSTFR
Trigger: CCTGAACGTGGACCTGACCCAGAACGTGCAGTACAA...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCACAGGAACCGGTTCTaGTTGTACTGCACGTTCTGG +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKHRNRF*LYCTFW
Trigger: CCAGAACGTGCAGTACAACCAGAACCGGTTCCTGTG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGACAGACAGCACTGGGTaGTCATGGTTCTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKTDSTG*SWFFRD
Trigger: GTCCCTGAAGAACCATGACCACCCAGTGCTGTCTGT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCAGTCGGCTAGAACATaGAGATTAGCCAGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKQSART*RLASQS
Trigger: GCTCTGGCTGGCTAATCTCCATGTTCTAGCCGACTG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396123.2
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGACGCAAGGTAGAAGGTaGAACAGCTGCAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKTQGRR*NSCKEE
Trigger: TTCCTCCTTGCAGCTGTTTCACCTTCTACCTTGCGT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp GAGCACCACCGTTTACTTAGCAAGGTCTCTATTGTGGATTCTCTTATTTCTTCCTTCTGCTTCTTGGGTTaGGTGGTCAGTTTCAGATTT +
Preference number: 4 (lower is better)
Translates to: EHHRLLSKVSIVDSLISSFCFLG*VVSFRF
Trigger: AAATCTGAAACTGACCACTCAACCCAAGAAGCAGAA...GGAAGAAATAAGAGAATCCACAATAGAGACCTTGCTAAGTAAACGGTGGTGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR TCA 90 bp AATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACGGGAATCTTTGCCGTTaGAAACAGCCGGACCCATTG +
Preference number: 4 (lower is better)
Translates to: NSCNDCQYKLWVLHSFLNGNLCR*KQPDPL
Trigger: CAATGGGTCCGGCTGTTTTCAACGGCAAAGATTCCC...GTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCATCAGAGATCACAATaGAAGGCCAGATGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKHQRSQ*KARCPA
Trigger: CGCAGGACATCTGGCCTTTCATTGTGATCTCTGATG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTAGTCACCAAAAATATAACCAGGTGAAGCGGTaGAGCTATCAAATCCTCTCG +
Preference number: 4 (lower is better)
Translates to: CVCVLSCTPGTPFSHQKYNQVKR*SYQILS
Trigger: CGAGAGGATTTGATAGCTTCACCGCTTCACCTGGTT...ATATTTTTGGTGACTAAATGGAGTACCTGGAGTACAAGATAACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp TTCTCAAAGGTGGATTTACAGAACCAGCTACTACATATCATCAGATTGCTTCCCCAACAGGTTATTCTTTaGCAGTTGTTGGCACTTCGG +
Preference number: 4 (lower is better)
Translates to: FSKVDLQNQLLHIIRLLPQQVIL*QLLALR
Trigger: CCGAAGTGCCAACAACTGGCAAAGAATAACCTGTTG...GGGAAGCAATCTGATGATATGTAGTAGCTGGTTCTGTAAATCCACCTTTGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGACATCCAGGGATGCTaGTTTAGTGACAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKDIQGC*FSDRRG
Trigger: GCCTCTTCTGTCACTAAAGCAGCATCCCTGGATGTC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGTTGGGGATGATGAAGTaGAGCTGGATCTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKLGMMK*SWISSP
Trigger: AGGAGAGGAGATCCAGCTGCACTTCATCATCCCCAA...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGTTCCTTTGGAATATTaGTTTGTAGGAGGTTACAGG +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTVPLEY*FVGGYR
Trigger: CCTGTAACCTCCTACAAAGCAATATTCCAAAGGAAC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTAGTCACCAAAAATATGCTCACCACAACCTCTaGCTCCCAAGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: CVCVLSCTPGTPFSHQKYAHHNL*LPSSSD
Trigger: ATCACTTGAACTTGGGAGGCAGAGGTTGTGGTGAGC...ATATTTTTGGTGACTAAATGGAGTACCTGGAGTACAAGATAACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR GCA 90 bp TATAGAACGTTACTTCCTTCGCCTAAATTCTCAAAGGTGGATTTACAGAACCAGGTGGCTGTCCTCAGCTaGAGTTTGTTGTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: YRTLLPSPKFSKVDLQNQVAVLS*SLLFSA
Trigger: AGCAGAAAACAACAAACTGCAGCTGAGGACAGCCAC...CTGGTTCTGTAAATCCACCTTTGAGAATTTAGGCGAAGGAAGTAACGTTCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGTCTTCTGTTTAAAATaGCATCTCAGATTCGGTGCA +
Preference number: 4 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTVFCLK*HLRFGA
Trigger: TGCACCGAATCTGAGATGCCATTTTAAACAGAAGAC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp AATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCATCCATGGGCTCGTTaGAAATGGAGACAAGGCGCA +
Preference number: 4 (lower is better)
Translates to: NSCNDCQYKLWVLHSFLNHPWAR*KWRQGA
Trigger: TGCGCCTTGTCTCCATTTCCAACGAGCCCATGGATG...GTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTAGATTAAAGGTCCTTTaGTTAGAGTCCCTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCVLSCTPGTPFRLKVL*LESLVH
Trigger: ATGCACAAGGGACTCTAACCAAAGGACCTTTAATCT...AAATGGAGTACCTGGAGTACAAGATAACACACACACACACACACACACACACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGCACCGTCCATTGCGTaGTACAGATTAAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKAPSIA*YRLKSP
Trigger: TGGGCTCTTTAATCTGTACCACGCAATGGACGGTGC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGTTTTCTGCCACATCCTaGGCTGCTTTACGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKFSATS*AALRSA
Trigger: AGCACTTCGTAAAGCAGCTCAGGATGTGGCAGAAAA...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCCATCTCGTATTCCTTaGCAACCAGCACGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKPSRIP*QPARAN
Trigger: ATTTGCACGTGCTGGTTGTCAAGGAATACGAGATGG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGTCCTCTCTAGTCAAGTaGGATTCTTCCCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKSSLVK*DSSLRN
Trigger: GTTCCTCAGGGAAGAATCTCACTTGACTAGAGAGGA...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR TCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCAGTCTGTGAAGGGGTaGGCCCTAAGAAATACATCT +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKQSVKG*ALRNTS
Trigger: AGATGTATTTCTTAGGGCTCACCCCTTCACAGACTG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ACCGCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGAGATTAAAGGTCCTTTaGTTAGAGTCCCTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: TAPKHHWVPSFGLLIQKKRLKVL*LESLVH
Trigger: ATGCACAAGGGACTCTAACCAAAGGACCTTTAATCT...CTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGCGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGTCAATGTCACCCTCTaGACAGAGGGTGCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKVNVTL*TEGAKE
Trigger: TTCTTTAGCACCCTCTGTCCAGAGGGTGACATTGAC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGTTAAAGAGTGGGGCCTaGAGCTCACATAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKLKSGA*SSHSKQ
Trigger: CTGTTTGCTATGTGAGCTCCAGGCCCCACTCTTTAA...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR GCA 90 bp AATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACGCCTCGATGGAATTGTaGAAGACCTCTTCAAAGCGT +
Preference number: 4 (lower is better)
Translates to: NSCNDCQYKLWVLHSFLNASMEL*KTSSKR
Trigger: ACGCTTTGAAGAGGTCTTGCACAATTCCATCGAGGC...GTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGTAAGTGTTGTACGCTaGGTACTTGGACAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKVSVVR*VLGQSH
Trigger: ATGAGACTGTCCAAGTACGCAGCGTACAACACTTAC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp AATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACGTGGCCATTGTCATCTaGCAAGAACCTCTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: NSCNDCQYKLWVLHSFLNVAIVI*QEPLVN
Trigger: GTTGACAAGAGGTTCTTGCCAGATGACAATGGCCAC...GTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp AATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCCAAGAAGAGCATTGTaGCCATTGTCATCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: NSCNDCQYKLWVLHSFLNPRRAL*PLSSGK
Trigger: CTTGCCAGATGACAATGGCCACAATGCTCTTCTTGG...GTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp ACCGCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGGCTTCTTGGGTTGAGTaGTCAGTTTCAGATTTATAT +
Preference number: 4 (lower is better)
Translates to: TAPKHHWVPSFGLLIQKKASWVE*SVSDLY
Trigger: ATATAAATCTGAAACTGACCACTCAACCCAAGAAGC...CTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp ATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCATGACCCTATTCTTTGCCAGTTGTTaGCACTTCGGGGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: MIVSINFGSCILSLTMTLFFASC*HFGESL
Trigger: CAAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAA...TAGGGTCATGGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp ACCGCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGGCCTTTAAATATCACTaGCTTGGCCTTGCATATTTT +
Preference number: 4 (lower is better)
Translates to: TAPKHHWVPSFGLLIQKKAFKYH*LGLAYF
Trigger: AAAATATGCAAGGCCAAGCCAGTGATATTTAAAGGC...CTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR TCA 90 bp ATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCGATTGGAGAATTCCGTaGAGTAACAGAAGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: IAAMIVSINFGSCILSLTDWRIP*SNRSLS
Trigger: AGAAAGGCTTCTGTTACTTCACGGAATTCTCCAATC...GGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR GCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGATGTGCTGCATGATGTaGTTCAAAGACACGTTCCTT +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKMCCMM*FKDTFL
Trigger: AAGGAACGTGTCTTTGAAGCACATCATGCAGCACAT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp CATATAGAACGTTACTTCCTTCGCCTAAATTCTCAAAGGTGGATTTACAGAACCGTCTTCTGTTTAAAATaGCATCTCAGATTCGGTGCA +
Preference number: 4 (lower is better)
Translates to: HIERYFLRLNSQRWIYRTVFCLK*HLRFGA
Trigger: TGCACCGAATCTGAGATGCCATTTTAAACAGAAGAC...GGTTCTGTAAATCCACCTTTGAGAATTTAGGCGAAGGAAGTAACGTTCTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCAGTGCGCATGGTCATaGATTAGGACAAAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKQCAWS*IRTKSV
Trigger: TACACTTTTTGTCCTAATCCATGACCATGCGCACTG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
3UTR CAA 72 bp TACGTGAGCACCACCGTTTACTTAGCAAGGTCTCTATaGTGGATTCTCTTATTTCTTCCAAATATTCACCTT +
Preference number: 4 (lower is better)
Translates to: YVSTTVYLARSL*WILLFLPNIHL
Trigger: AAGGTGAATATTTGGAAGAAATAAGAGAATCCACAATAGAGACCTTGCTAAGTAAACGGTGGTGCTCACGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCATCTACTGAAATACTaGCACCGCTACAAAATAACC +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKHLLKY*HRYKIT
Trigger: GGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGATG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
3UTR CAA 72 bp AATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTaGCATTCTTTCCTTAACCATGACCCTATCATCAGT +
Preference number: 4 (lower is better)
Translates to: NSCNDCQYKLWV*HSFLNHDPIIS
Trigger: ACTGATGATAGGGTCATGGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGCCTTTAAATATCACTaGCTTGGCCTTGCATATTTT +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKAFKYH*LGLAYF
Trigger: AAAATATGCAAGGCCAAGCCAGTGATATTTAAAGGC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CCA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCTTTTTATATATTCATaGCTCTTGTCTGTCACGAGG +
Preference number: 4 (lower is better)
Translates to: STEILAPLQNNPRFFRTKLFIYS*LLSVTR
Trigger: CCTCGTGACAGACAAGAGCCATGAATATATAAAAAG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CCA 90 bp ATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCGCAAGGTCTCTATTGTaGATTCTCTTATTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: IAAMIVSINFGSCILSLTARSLL*ILLFLP
Trigger: TGGAAGAAATAAGAGAATCCACAATAGAGACCTTGC...GGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CCA 90 bp CATATAGAACGTTACTTCCTTCGCCTAAATTCTCAAAGGTGGATTTACAGAACCTGTCAGTATAAACTTTaGGTCTTGCATTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: HIERYFLRLNSQRWIYRTCQYKL*VLHSFL
Trigger: AAGGAAAGAATGCAAGACCCAAAGTTTATACTGACA...GGTTCTGTAAATCCACCTTTGAGAATTTAGGCGAAGGAAGTAACGTTCTATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS GCA 90 bp GGCAGGCCTTGGTCAAGGAGCACTGGGAGGCCTGCAGGACCCACGTaGCGGCAGCGGGCGCCACGGATGAGGAGGATGAGCCCGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GRPWSRSTGRPAGPT*RQRAPRMRRMSPRR
Trigger: CCTCCTCGGGCTCATCCTCCTCATCCGTGGCGCCCGCTGCCGGCACGTGGGTCCTGCAGGCCTCCCAGTGCTCCTTGACCAAGGCCTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 90 bp GACAGCTGGGAGCACGACGAGGTGACCGACACCTGGACGCTCCTCTaGCCGGTCCTGAGGCTACAGTCGGGCTGGGGCGTCGGCCCGGGA +
Preference number: 5 (lower is better)
Translates to: DSWEHDEVTDTWTLL*PVLRLQSGWGVGPG
Trigger: TCCCGGGCCGACGCCCCAGCCCGACTGTAGCCTCAGGACCGGCCAGAGGAGCGTCCAGGTGTCGGTCACCTCGTCGTGCTCCCAGCTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS GCA 90 bp CCCACGGTGACGCCTGAGCTGGGACTGCCCAGGATGATCTCAAAGTaGTCCTCCAGCGCCAGCCGGGCCCGCACGTGGGCCAGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: PTVTPELGLPRMISK*SSSASRARTWASRS
Trigger: TGAGCGGCTGGCCCACGTGCGGGCCCGGCTGGCGCTGGAGGAGCACTTTGAGATCATCCTGGGCAGTCCCAGCTCAGGCGTCACCGTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS GCA 90 bp ATGGGTGGCTGGCGGCAGGCCTTGGTCAAGGAGCACTGGGAGGCCTaGAGGACCCACGTGCCGGCAGCGGGCGCCACGGATGAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: MGGWRQALVKEHWEA*RTHVPAAGATDEED
Trigger: ATCCTCCTCATCCGTGGCGCCCGCTGCCGGCACGTGGGTCCTGCAGGCCTCCCAGTGCTCCTTGACCAAGGCCTGCCGCCAGCCACCCAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 90 bp CCCGAGGAGGAGGACAGCTGGGAGCACGACGAGGTGACCGACACCTaGACGCTCCTCTGGCCGGTCCTGAGGCTACAGTCGGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: PEEEDSWEHDEVTDT*TLLWPVLRLQSGWG
Trigger: GCCCCAGCCCGACTGTAGCCTCAGGACCGGCCAGAGGAGCGTCCAGGTGTCGGTCACCTCGTCGTGCTCCCAGCTGTCCTCCTCCTCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS GCA 90 bp AAGGGCTGCGGCGGCGCCTGCTGGTACTGCCGGATCTCGGTCAGGTaGGACTCGCGCCAAGAGCGCAGGAAGATCTGCTCCAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: KGCGGACWYCRISVR*DSRQERRKICSRSS
Trigger: GGAGGACCTGGAGCAGATCTTCCTGCGCTCTTGGCGCGAGTCGCACCTGACCGAGATCCGGCAGTACCAGCAGGCGCCGCCGCAGCCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS GCA 90 bp CAGGGCACCCGCAGCAGGACCATGAGCCCGTGGCCGCAGGGGCACTaGTTCGGGGAGTTGAGGAGGTTCTGCGTGATCTCCAGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: QGTRSRTMSPWPQGH*FGELRRFCVISSVS
Trigger: GGAGACGCTGGAGATCACGCAGAACCTCCTCAACTCCCCGAAGCAGTGCCCCTGCGGCCACGGGCTCATGGTCCTGCTGCGGGTGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS CCA 90 bp AAGAAGACAATGGGTGGCTGGCGGCAGGCCTTGGTCAAGGAGCACTaGGAGGCCTGCAGGACCCACGTGCCGGCAGCGGGCGCCACGGAT +
Preference number: 5 (lower is better)
Translates to: KKTMGGWRQALVKEH*EACRTHVPAAGATD
Trigger: ATCCGTGGCGCCCGCTGCCGGCACGTGGGTCCTGCAGGCCTCCCAGTGCTCCTTGACCAAGGCCTGCCGCCAGCCACCCATTGTCTTCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS GCA 90 bp CGGATCTCGGTCAGGTGCGACTCGCGCCAAGAGCGCAGGAAGATCTaGTCCAGGTCCTCCATCAAGGGCACCTGGTCCGCGGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: RISVRCDSRQERRKI*SRSSIKGTWSAASW
Trigger: CCAGCTGGCCGCGGACCAGGTGCCCTTGATGGAGGACCTGGAGCAGATCTTCCTGCGCTCTTGGCGCGAGTCGCACCTGACCGAGATCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS CCA 90 bp TGTGCAGGGGCTCCCGCCTCCTGGGCTGCGCCTTTGATCTGTGCCTaGGGATGGAAGAGGATGCGTGGGGCGCGTAATGCCCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: CAGAPASWAAPLICA*GWKRMRGARNALLC
Trigger: GCACAGCAGGGCATTACGCGCCCCACGCATCCTCTTCCATCCCCAGGCACAGATCAAAGGCGCAGCCCAGGAGGCGGGAGCCCCTGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS TCA 90 bp GGAACATCTCGGAGAGGCCCTCGGCCAGGGAGTAAGCACACTCGATaGCGTGCACGCTGTCGTTGCAGGAGCTGGCGGCCAGGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: GTSRRGPRPGSKHTR*RARCRCRSWRPGWP
Trigger: TGGCCAGCCTGGCCGCCAGCTCCTGCAACGACAGCGTGCACGTCATCGAGTGTGCTTACTCCCTGGCCGAGGGCCTCTCCGAGATGTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS GCA 90 bp TGCTGGGGTTCGTCCCAGGAACGGGCTCGCTGGGGAAGGCAGCCGTaGTCTCCAGGGCTGGGAAGAGGGAACTGGAACAAGTACTGGCGG +
Preference number: 5 (lower is better)
Translates to: CWGSSQERARWGRQP*SPGLGRGNWNKYWR
Trigger: CCGCCAGTACTTGTTCCAGTTCCCTCTTCCCAGCCCTGGAGAGCACGGCTGCCTTCCCCAGCGAGCCCGTTCCTGGGACGAACCCCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS GCA 90 bp TCTTCCCTGGCATTGGCGGTCTGGAACTCATCGCGCAGCCGGAACTaGCACTCGTCCTCGAGCTCCAGGCGGACGACCGTCTGGCGCAGT +
Preference number: 5 (lower is better)
Translates to: SSLALAVWNSSRSRN*HSSSSSRRTTVWRS
Trigger: ACTGCGCCAGACGGTCGTCCGCCTGGAGCTCGAGGACGAGTGGCAGTTCCGGCTGCGCGATGAGTTCCAGACCGCCAATGCCAGGGAAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS GCA 90 bp TCTGTGCCTGGGGATGGAAGAGGATGCGTGGGGCGCGTAATGCCCTaGTGTGCAGAGCCTGGCTCGGGTCTGCCTGACACCCAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SVPGDGRGCVGRVMP*CAEPGSGLPDTQAS
Trigger: GGAAGCCTGGGTGTCAGGCAGACCCGAGCCAGGCTCTGCACAGCAGGGCATTACGCGCCCCACGCATCCTCTTCCATCCCCAGGCACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS CCA 90 bp GGTGATCAGAAGCTGGTCCTGCCTGCTGAGCTCCCATCAGGATGCTaGGGTTCGTCCCAGGAACGGGCTCGCTGGGGAAGGCAGCCGTGC +
Preference number: 5 (lower is better)
Translates to: GDQKLVLPAELPSGC*GSSQERARWGRQPC
Trigger: GCACGGCTGCCTTCCCCAGCGAGCCCGTTCCTGGGACGAACCCCAGCATCCTGATGGGAGCTCAGCAGGCAGGACCAGCTTCTGATCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CCA 90 bp ACACGAGCTTGGGCAAGAAGACAATGGGTGGCTGGCGGCAGGCCTTaGTCAAGGAGCACTGGGAGGCCTGCAGGACCCACGTGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: TRAWARRQWVAGGRP*SRSTGRPAGPTCRQ
Trigger: CTGCCGGCACGTGGGTCCTGCAGGCCTCCCAGTGCTCCTTGACCAAGGCCTGCCGCCAGCCACCCATTGTCTTCTTGCCCAAGCTCGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 90 bp AAGAAGAGGTGGCTGTGGTGCTGCAGGAACTTCTCCAGCAGGAGCTaGGCGGGCGCTGCGAGGAACGTGTGCTTGCTGTCCGGGGCACAG +
Preference number: 5 (lower is better)
Translates to: KKRWLWCCRNFSSRS*AGAARNVCLLSGAQ
Trigger: CTGTGCCCCGGACAGCAAGCACACGTTCCTCGCAGCGCCCGCCCAGCTCCTGCTGGAGAAGTTCCTGCAGCACCACAGCCACCTCTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 90 bp GGGTGGTCATGGTTCTTCAGGGACAGCGGGAAGAAGAGGTGGCTGTaGTGCTGCAGGAACTTCTCCAGCAGGAGCTGGGCGGGCGCTGCG +
Preference number: 5 (lower is better)
Translates to: GWSWFFRDSGKKRWL*CCRNFSSRSWAGAA
Trigger: CGCAGCGCCCGCCCAGCTCCTGCTGGAGAAGTTCCTGCAGCACCACAGCCACCTCTTCTTCCCGCTGTCCCTGAAGAACCATGACCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 90 bp AGGGCCTGGGCCCAGACCCACGGACTCAGGAGGCACCTGTGGTCCTaGCCTGACTCTCATGGAAGCCACATCAGACTCCAGGAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: RAWAQTHGLRRHLWS*PDSHGSHIRLQEAQ
Trigger: CTGAGCCTCCTGGAGTCTGATGTGGCTTCCATGAGAGTCAGGCCAGGACCACAGGTGCCTCCTGAGTCCGTGGGTCTGGGCCCAGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS CCA 90 bp AGCACCAGGGCCTGGGCCCAGACCCACGGACTCAGGAGGCACCTGTaGTCCTGGCCTGACTCTCATGGAAGCCACATCAGACTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: STRAWAQTHGLRRHL*SWPDSHGSHIRLQE
Trigger: CTCCTGGAGTCTGATGTGGCTTCCATGAGAGTCAGGCCAGGACCACAGGTGCCTCCTGAGTCCGTGGGTCTGGGCCCAGGCCCTGGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS GCA 90 bp TTCAGGATGATGAAGTTGTGCACGTGGCAGCGGGAGAAGGGCTCTTaGACCTCGCTGGCCCGGGTCTTGCTGGACCACTTCCGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: FRMMKLCTWQREKGS*TSLARVLLDHFRRP
Trigger: GGGCCTGCGGAAGTGGTCCAGCAAGACCCGGGCCAGCGAGGTGCAAGAGCCCTTCTCCCGCTGCCACGTGCACAACTTCATCATCCTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 90 bp GGCGCTGCGAGGAACGTGTGCTTGCTGTCCGGGGCACAGATGTACTaGGCCGGCACGACCGCGGCAGAGTTATCAGACACCTTGGATGTG +
Preference number: 5 (lower is better)
Translates to: GAARNVCLLSGAQMY*AGTTAAELSDTLDV
Trigger: CACATCCAAGGTGTCTGATAACTCTGCCGCGGTCGTGCCGGCCCAGTACATCTGTGCCCCGGACAGCAAGCACACGTTCCTCGCAGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS TCA 90 bp CGGCCATCAGGGCGGCCGCGTAGTGCTGCACGAGAACAAAGGTCCTaGTCACCGCGCTGTGCAGGCGGGGGAACCTTTTTCCTAATGCAG +
Preference number: 5 (lower is better)
Translates to: RPSGRPRSAAREQRS*SPRCAGGGTFFLMQ
Trigger: CTGCATTAGGAAAAAGGTTCCCCCGCCTGCACAGCGCGGTGATCAGGACCTTTGTTCTCGTGCAGCACTACGCGGCCGCCCTGATGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS TCA 90 bp TGCGCCAGGTCCCTCGAGTGCCCTGTCCTGGGAAGCCTTGCTCATTaGGTGCACCTGCTCACCCTCCTGGAGCCTAGGATGAGAGGAGTC +
Preference number: 5 (lower is better)
Translates to: CARSLECPVLGSLAH*VHLLTLLEPRMRGV
Trigger: GACTCCTCTCATCCTAGGCTCCAGGAGGGTGAGCAGGTGCACTCAATGAGCAAGGCTTCCCAGGACAGGGCACTCGAGGGACCTGGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432985.1
CDS CCA 90 bp CCACGAGGAGAAAGCCCGCAGGGACATCCATGGGCTCGTTGGAAATaGAGACAAGGCGCAGGTCCTTCCCGGCCTGGCAAAACCCGTCTG +
Preference number: 5 (lower is better)
Translates to: PRGESPQGHPWARWK*RQGAGPSRPGKTRL
Trigger: CAGACGGGTTTTGCCAGGCCGGGAAGGACCTGCGCCTTGTCTCCATTTCCAACGAGCCCATGGATGTCCCTGCGGGCTTTCTCCTCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CCA 90 bp GGGAGGGCAGGAGGGAGGCGGCCTTGGGCAGGCCACTGCTGTCAGTaGACACAACCATGTCGTACACGAGCTTGGGCAAGAAGACAATGG +
Preference number: 5 (lower is better)
Translates to: GRAGGRRPWAGHCCQ*TQPCRTRAWARRQW
Trigger: CCATTGTCTTCTTGCCCAAGCTCGTGTACGACATGGTTGTGTCCACTGACAGCAGTGGCCTGCCCAAGGCCGCCTCCCTCCTGCCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 90 bp GACTGTCCAAAGAGTGGCACAGAGGCCTGCCTTAGCATCCCAGGATaGTGTCTCTGGAGCTCCTGTTTCAGGAGGGCAGGCCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: DCPKSGTEACLSIPG*CLWSSCFRRAGRAS
Trigger: GCTGGCCCGGCCTGCCCTCCTGAAACAGGAGCTCCAGAGACACCATCCTGGGATGCTAAGGCAGGCCTCTGTGCCACTCTTTGGACAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470980.1
CDS-3UTR CAA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTTGGTCTTGGCAAGCTaGCCCTCGACCAACAGCCGG +
Preference number: 5 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSLVLAS*PSTNSR
Trigger: CCGGCTGTTGGTCGAGGGCAAGCTTGCCAAGACCAA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCCAGATGTCCTGCGGCTaGATTCCCAGCTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSQMSCG*IPSSSC
Trigger: GCAGGAGGAGCTGGGAATCAAGCCGCAGGACATCTG...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCCTCTCCCCAGCAGAGTaGACATCCACCACGTTCCAC +
Preference number: 5 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPLSPAE*TSTTFH
Trigger: GTGGAACGTGGTGGATGTCAACTCTGCTGGGGAGAG...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS GCA 90 bp ATCACGCTGAAGCGGTTGAACCGGCAGAGCAGGAGGCCGGCGCTGTaGACCCGCAGGTTGAAGTCTACATCGTCACACAGGAACCGGTTC +
Preference number: 5 (lower is better)
Translates to: ITLKRLNRQSRRPAL*TRRLKSTSSHRNRF
Trigger: GAACCGGTTCCTGTGTGACGATGTAGACTTCAACCTGCGGGTGCACAGCGCCGGCCTCCTGCTCTGCCGGTTCAACCGCTTCAGCGTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS GCA 90 bp GGGACACCTTGTGGGCAGAGCACCTTCCAGAGCTTCACTGGGTGCTaGCTGCCAGGTCTTGCCTCCCTGACTCCAAGCAGGGAGGATTCT +
Preference number: 5 (lower is better)
Translates to: GTPCGQSTFQSFTGC*LPGLASLTPSREDS
Trigger: AGAATCCTCCCTGCTTGGAGTCAGGGAGGCAAGACCTGGCAGGCAGCACCCAGTGAAGCTCTGGAAGGTGCTCTGCCCACAAGGTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432985.1
CDS CCA 90 bp TTGTCATCTGGCAAGAACCTCTTGTCAACGGCGCACACCAGGAGATaGTCCGGCAGGCTGGGGGACTTGACCCCCACGAGGAGAAAGCCC +
Preference number: 5 (lower is better)
Translates to: LSSGKNLLSTAHTRR*SGRLGDLTPTRRKP
Trigger: GGGCTTTCTCCTCGTGGGGGTCAAGTCCCCCAGCCTGCCGGACCATCTCCTGGTGTGCGCCGTTGACAAGAGGTTCTTGCCAGATGACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CCA 90 bp ACAACCATGTCGTACACGAGCTTGGGCAAGAAGACAATGGGTGGCTaGCGGCAGGCCTTGGTCAAGGAGCACTGGGAGGCCTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: TTMSYTSLGKKTMGG*RQALVKEHWEACRT
Trigger: GGTCCTGCAGGCCTCCCAGTGCTCCTTGACCAAGGCCTGCCGCCAGCCACCCATTGTCTTCTTGCCCAAGCTCGTGTACGACATGGTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 90 bp GGACACAACCATGTCGTACACGAGCTTGGGCAAGAAGACAATGGGTaGCTGGCGGCAGGCCTTGGTCAAGGAGCACTGGGAGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: GHNHVVHELGQEDNG*LAAGLGQGALGGLQ
Trigger: CTGCAGGCCTCCCAGTGCTCCTTGACCAAGGCCTGCCGCCAGCCACCCATTGTCTTCTTGCCCAAGCTCGTGTACGACATGGTTGTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGCTCCAGATTGTAACTaGTGCACACCGGTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPAPDCN*CTPVSH
Trigger: GTGGGACACCGGTGTGCACAAGTTACAATCTGGAGC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGCGGGAGAAGGGCTCTaGCACCTCGCTGGCCCGGGT +
Preference number: 5 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNAGEGL*HLAGPG
Trigger: ACCCGGGCCAGCGAGGTGCAAGAGCCCTTCTCCCGC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGCGGGAGAAGGGCTCTaGCACCTCGCTGGCCCGGGT +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVAGEGL*HLAGPG
Trigger: ACCCGGGCCAGCGAGGTGCAAGAGCCCTTCTCCCGC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAGTGAGCCGAGGTCATaGCACCATTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSSEPRS*HHCTPA
Trigger: GGCTGGAGTGCAATGGTGCAATGACCTCGGCTCACT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS TCA 90 bp AGGAACAGACACTGGTTCTCCAGAGGCCACCACTGGAAAGGTGACTaGAGCTGGTCCCACCAAGCCAACCTGCGGCACGCAGGACATGCC +
Preference number: 5 (lower is better)
Translates to: RNRHWFSRGHHWKGD*SWSHQANLRHAGHA
Trigger: GGCATGTCCTGCGTGCCGCAGGTTGGCTTGGTGGGACCAGCTTCAGTCACCTTTCCAGTGGTGGCCTCTGGAGAACCAGTGTCTGTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
CDS TCA 90 bp GGAGATGGGCTGGATGGCAGAGGCGCCGTACTGCTCGTATGCCCGTaGGACAGACTGGGAATTCTGGTAGCACGTGTACAAGAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: GDGLDGRGAVLLVCP*DRLGILVARVQEGA
Trigger: AGCCCCCTCTTGTACACGTGCTACCAGAATTCCCAGTCTGTCTCACGGGCATACGAGCAGTACGGCGCCTCTGCCATCCAGCCCATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000234142.9
ENST00000381483.6
ENST00000381486.7
ENST00000432985.1
CDS TCA 90 bp CCACATCCTGAGCTGCTTTACGAAGTGCTTCCCCACGGTGACGCCTaGGCTGGGACTGCCCAGGATGATCTCAAAGTGCTCCTCCAGCGC +
Preference number: 5 (lower is better)
Translates to: PHPELLYEVLPHGDA*AGTAQDDLKVLLQR
Trigger: GCGCTGGAGGAGCACTTTGAGATCATCCTGGGCAGTCCCAGCTCAGGCGTCACCGTGGGGAAGCACTTCGTAAAGCAGCTCAGGATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS GCA 90 bp CATGGGAGAGGAGCTTCTGCGCTACTGCCAGCTGGAAGGGCCGGATaGTGTGTGGCTCCAGATTGTAACTTGTGCACACCGGTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: HGRGASALLPAGRAG*CVAPDCNLCTPVSH
Trigger: GTGGGACACCGGTGTGCACAAGTTACAATCTGGAGCCACACAGCATCCGGCCCTTCCAGCTGGCAGTAGCGCAGAAGCTCCTCTCCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS CCA 90 bp CAGTGGACACAACCATGTCGTACACGAGCTTGGGCAAGAAGACAATaGGTGGCTGGCGGCAGGCCTTGGTCAAGGAGCACTGGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: QWTQPCRTRAWARRQ*VAGGRPWSRSTGRP
Trigger: AGGCCTCCCAGTGCTCCTTGACCAAGGCCTGCCGCCAGCCACCCATTGTCTTCTTGCCCAAGCTCGTGTACGACATGGTTGTGTCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 90 bp GCAGGCCACTGCTGTCAGTGGACACAACCATGTCGTACACGAGCTTaGGCAAGAAGACAATGGGTGGCTGGCGGCAGGCCTTGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: AGHCCQWTQPCRTRA*ARRQWVAGGRPWSR
Trigger: CCTTGACCAAGGCCTGCCGCCAGCCACCCATTGTCTTCTTGCCCAAGCTCGTGTACGACATGGTTGTGTCCACTGACAGCAGTGGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCTCTTCCTCTTCCTCATaGTCCACTCGGCTACCACCT +
Preference number: 5 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPSSSSS*STRLPP
Trigger: AGGTGGTAGCCGAGTGGACAATGAGGAAGAGGAAGA...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACACGTGCACGCTGTCGTaGCAGGAGCTGGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNTCTLS*QELAAR
Trigger: CCTGGCCGCCAGCTCCTGCAACGACAGCGTGCACGT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGACGTGCACGCTGTCGTaGCAGGAGCTGGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVTCTLS*QELAAR
Trigger: CCTGGCCGCCAGCTCCTGCAACGACAGCGTGCACGT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCTTCACCTCCCTGCAGTaGAGCAATCGGTCCACCAAT +
Preference number: 5 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPFTSLQ*SNRSTN
Trigger: ATTGGTGGACCGATTGCTCAACTGCAGGGAGGTGAA...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAGCTCCTCATCCTCGTaGTCTGTGCTGCTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSSSSSS*SVLLSF
Trigger: GAAGCTGAGCAGCACAGACAACGAGGATGAGGAGCT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGGCTGGCGGCAGGCCTaGGTCAAGGAGCACTGGGAG +
Preference number: 5 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHGWRQA*VKEHWE
Trigger: CTCCCAGTGCTCCTTGACCAAGGCCTGCCGCCAGCC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGGCTGGCGGCAGGCCTaGGTCAAGGAGCACTGGGAG +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVGWRQA*VKEHWE
Trigger: CTCCCAGTGCTCCTTGACCAAGGCCTGCCGCCAGCC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGTCGCTGGCCCGGGTCTaGCTGGACCACTTCCGCAGG +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVSLARV*LDHFRR
Trigger: CCTGCGGAAGTGGTCCAGCAAGACCCGGGCCAGCGA...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTTCAGGATGATGAAGTaGTGCACGTGGCAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSFRMMK*CTWQRE
Trigger: CTCCCGCTGCCACGTGCACAACTTCATCATCCTGAA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGGGCTGGCCCAGAACTaGGGAGTCTCAAGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPGLAQN*GVSSFH
Trigger: ATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGTAATCCCAGCACTTTaGGAGGATGAGGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPVIPAL*EDEVGR
Trigger: TCTGCCCACCTCATCCTCCAAAAGTGCTGGGATTAC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS GCA 90 bp GCCACCACTGGAAAGGTGACTGAAGCTGGTCCCACCAAGCCAACCTaGGGCACGCAGGACATGCCTGCGCTCTCATACTTAGCTCTGTTC +
Preference number: 5 (lower is better)
Translates to: ATTGKVTEAGPTKPT*GTQDMPALSYLALF
Trigger: GAACAGAGCTAAGTATGAGAGCGCAGGCATGTCCTGCGTGCCGCAGGTTGGCTTGGTGGGACCAGCTTCAGTCACCTTTCCAGTGGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
CDS-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTTCGCTGGCCCGGGTCTaGCTGGACCACTTCCGCAGG +
Preference number: 5 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSSLARV*LDHFRR
Trigger: CCTGCGGAAGTGGTCCAGCAAGACCCGGGCCAGCGA...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGGGCTGGCCCAGAACTaGGGAGTCTCAAGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSGLAQN*GVSSFH
Trigger: ATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS GCA 90 bp GTGGTGGTAAGTGTTGTACGCTGCGTACTTGGACAGTCTCATCCGTaGCGTCTGACGCCGCACATAAAGGTCCTCCGGCTTCCGGGACAT +
Preference number: 5 (lower is better)
Translates to: VVVSVVRCVLGQSHP*RLTPHIKVLRLPGH
Trigger: ATGTCCCGGAAGCCGGAGGACCTTTATGTGCGGCGTCAGACGGCACGGATGAGACTGTCCAAGTACGCAGCGTACAACACTTACCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 90 bp CAGGACATGCCTGCGCTCTCATACTTAGCTCTGTTCCCACCACCTTaGGGGCAGCCACCATCTGGAGCTGATGGAGATTCTGGAGACCAC +
Preference number: 5 (lower is better)
Translates to: QDMPALSYLALFPPP*GQPPSGADGDSGDH
Trigger: GTGGTCTCCAGAATCTCCATCAGCTCCAGATGGTGGCTGCCCCCAAGGTGGTGGGAACAGAGCTAAGTATGAGAGCGCAGGCATGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
CDS-3UTR CAA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGATGCCTCGATGGAATaGTGCAAGACCTCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPDASME*CKTSSK
Trigger: CTTTGAAGAGGTCTTGCACAATTCCATCGAGGCATC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCTGGGCACCAGGTTGTaGGACCGCAGGGATGCCTCG +
Preference number: 5 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSLGTRL*DRRDAS
Trigger: CGAGGCATCCCTGCGGTCCAACAACCTGGTGCCCAG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TTCATTCTGAGGACAGCCCTCAGAGGTGGAATTGCCCAGGTCGGGTTCAAATATGGCCTGGGCACCAGGTaGTTGGACCGCAGGGATGCC +
Preference number: 5 (lower is better)
Translates to: FILRTALRGGIAQVGFKYGLGTR*LDRRDA
Trigger: GGCATCCCTGCGGTCCAACAACCTGGTGCCCAGGCC...ATATTTGAACCCGACCTGGGCAATTCCACCTCTGAGGGCTGTCCTCAGAATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCAAACCAAGAAGAGCATaGTGGCCATTGTCATCTGGC +
Preference number: 5 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPKPRRA*WPLSSG
Trigger: GCCAGATGACAATGGCCACAATGCTCTTCTTGGTTT...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGTTATTCTTTGCCAGTaGTTGGCACTTCGGGGAATC +
Preference number: 5 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPVILCQ*LALRGI
Trigger: GATTCCCCGAAGTGCCAACAACTGGCAAAGAATAAC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCCCAACAGGTTATTCTTaGCCAGTTGTTGGCACTTCG +
Preference number: 5 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPPTGYS*PVVGTS
Trigger: CGAAGTGCCAACAACTGGCAAAGAATAACCTGTTGG...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCATGTCGTACACGAGCTaGGGCAAGAAGACAATGGGT +
Preference number: 5 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSMSYTS*GKKTMG
Trigger: ACCCATTGTCTTCTTGCCCAAGCTCGTGTACGACAT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGAGTTATCAGACACCTaGGATGTGATGTGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPELSDT*DVMWKD
Trigger: GTCCTTCCACATCACATCCAAGGTGTCTGATAACTC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGCGAGGAACGTGTGCTaGCTGTCCGGGGCACAGATG +
Preference number: 5 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNARNVC*LSGAQM
Trigger: CATCTGTGCCCCGGACAGCAAGCACACGTTCCTCGC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCTACAGGGGAACCTACTaGGCTGAAATCCCATCTACT +
Preference number: 5 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPYRGTY*AEIPST
Trigger: AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTA...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTCCTGGGCTGCGCCTTaGATCTGTGCCTGGGGATGG +
Preference number: 5 (lower is better)
Translates to: WGTGHVLKDTASQGLAKHSWAAP*ICAWGW
Trigger: CCATCCCCAGGCACAGATCAAAGGCGCAGCCCAGGA...GTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCAAGCACACCATCCACTaGGCCACCGTATTTTCAGTC +
Preference number: 5 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSKHTIH*ATVFSV
Trigger: GACTGAAAATACGGTGGCCAAGTGGATGGTGTGCTT...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396123.2
CDS TCA 90 bp ACCTCAAAGACCTCGGCAAGGACTCCCCATGCGGGTCCATCCCACTaGAGATCAGGATGCAAGGCAGACCCTCCAGCTCCAAGTAAGTCT +
Preference number: 5 (lower is better)
Translates to: TSKTSARTPHAGPSH*RSGCKADPPAPSKS
Trigger: AGACTTACTTGGAGCTGGAGGGTCTGCCTTGCATCCTGATCTTCAGTGGGATGGACCCGCATGGGGAGTCCTTGCCGAGGTCTTTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
ENST00000472040.1
CDS GCA 90 bp GGAATCCGCAATGGAACACACATGGGAGAGGAGCTTCTGCGCTACTaGCAGCTGGAAGGGCCGGATGCTGTGTGGCTCCAGATTGTAACT +
Preference number: 5 (lower is better)
Translates to: GIRNGTHMGEELLRY*QLEGPDAVWLQIVT
Trigger: AGTTACAATCTGGAGCCACACAGCATCCGGCCCTTCCAGCTGGCAGTAGCGCAGAAGCTCCTCTCCCATGTGTGTTCCATTGCGGATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS GCA 90 bp GTGGATCTCGTTGTAGGGGCTGATGAGGGTGTGCTGTGTCTGCAGTaGATACGGGAAGGAGGTCACGTGAAGTGTCACAATGTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: VDLVVGADEGVLCLQ*IREGGHVKCHNVGG
Trigger: GCCCCCAACATTGTGACACTTCACGTGACCTCCTTCCCGTATGCACTGCAGACACAGCACACCCTCATCAGCCCCTACAACGAGATCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS GCA 90 bp GACGTCATTCAGGTTCCCACAGAGGTAAGGGAAGTTCCCATGGCCTaGAGAGGAACAGCAGCGACTTGGCACCCAGTCTTGTGCACAGCT +
Preference number: 5 (lower is better)
Translates to: DVIQVPTEVREVPMA*RGTAATWHPVLCTA
Trigger: AGCTGTGCACAAGACTGGGTGCCAAGTCGCTGCTGTTCCTCTGCAGGCCATGGGAACTTCCCTTACCTCTGTGGGAACCTGAATGACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432985.1
CDS CCA 90 bp GCGGCAGAGTTATCAGACACCTTGGATGTGATGTGGAAGGACCTGTaGCCGCCCACCACGATCTGCTTCTTCATCACGCTGAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: AAELSDTLDVMWKDL*PPTTICFFITLKRL
Trigger: CAACCGCTTCAGCGTGATGAAGAAGCAGATCGTGGTGGGCGGCCACAGGTCCTTCCACATCACATCCAAGGTGTCTGATAACTCTGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 90 bp GAGGTAAGGGAAGTTCCCATGGCCTGCAGAGGAACAGCAGCGACTTaGCACCCAGTCTTGTGCACAGCTTACGGTCCCATACATGTGGGT +
Preference number: 5 (lower is better)
Translates to: EVREVPMACRGTAAT*HPVLCTAYGPIHVG
Trigger: ACCCACATGTATGGGACCGTAAGCTGTGCACAAGACTGGGTGCCAAGTCGCTGCTGTTCCTCTGCAGGCCATGGGAACTTCCCTTACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432985.1
CDS-3UTR CAA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCCAGATTAAAGGTCCTTaGGTTAGAGTCCCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPQIKGP*VRVPCA
Trigger: TGCACAAGGGACTCTAACCAAAGGACCTTTAATCTG...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACCAGATGTCCTGCGGCTaGATTCCCAGCTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNQMSCG*IPSSSC
Trigger: GCAGGAGGAGCTGGGAATCAAGCCGCAGGACATCTG...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCAGATGTCCTGCGGCTaGATTCCCAGCTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHQMSCG*IPSSSC
Trigger: GCAGGAGGAGCTGGGAATCAAGCCGCAGGACATCTG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACATCACGCTGAAGCGGTaGAACCGGCAGAGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNITLKR*NRQSRR
Trigger: CCTCCTGCTCTGCCGGTTCAACCGCTTCAGCGTGAT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGATCACGCTGAAGCGGTaGAACCGGCAGAGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVITLKR*NRQSRR
Trigger: CCTCCTGCTCTGCCGGTTCAACCGCTTCAGCGTGAT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCGGTCTTCCCTGGCATaGGCGGTCTGGAACTCATCG +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVRSSLA*AVWNSS
Trigger: CGATGAGTTCCAGACCGCCAATGCCAGGGAAGACCG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCGGTCTTCCCTGGCATaGGCGGTCTGGAACTCATCG +
Preference number: 5 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHRSSLA*AVWNSS
Trigger: CGATGAGTTCCAGACCGCCAATGCCAGGGAAGACCG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCGGAAAGGTAGACTCTTaGCATCTCAACCTTCTCATC +
Preference number: 5 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPGKVDS*HLNLLI
Trigger: GATGAGAAGGTTGAGATGCAAAGAGTCTACCTTTCC...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS TCA 90 bp ATCTCAGATTCGGTGCAAAAGCCTGGCTCCACGCAAGGTAGAAGGTaGAACAGCTGCAAGGAGGAAGGGCCGTGTAGCCTTCGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: ISDSVQKPGSTQGRR*NSCKEEGPCSLRSA
Trigger: TGCTGAGCGAAGGCTACACGGCCCTTCCTCCTTGCAGCTGTTTCACCTTCTACCTTGCGTGGAGCCAGGCTTTTGCACCGAATCTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000628795.2
CDS TCA 90 bp CGTGAAGTGTCACAATGTTGGGGGCCTCCTTCACCTCCCTGCAGTTaGGCAATCGGTCCACCAATCCCACCGACGGGTCACTTTGAGAAT +
Preference number: 5 (lower is better)
Translates to: REVSQCWGPPSPPCS*AIGPPIPPTGHFEN
Trigger: ATTCTCAAAGTGACCCGTCGGTGGGATTGGTGGACCGATTGCTCAACTGCAGGGAGGTGAAGGAGGCCCCCAACATTGTGACACTTCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS TCA 90 bp GCCTTGCTCATTGAGTGCACCTGCTCACCCTCCTGGAGCCTAGGATaGGAGGAGTCACCTTTTCTAACCAATGGGGCTGTGCCACTTGCT +
Preference number: 5 (lower is better)
Translates to: ALLIECTCSPSWSLG*EESPFLTNGAVPLA
Trigger: AGCAAGTGGCACAGCCCCATTGGTTAGAAAAGGTGACTCCTCTCATCCTAGGCTCCAGGAGGGTGAGCAGGTGCACTCAATGAGCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432985.1
CDS CCA 90 bp GCCGATGGTCGCGGCAGGGCCAACAGGTTATTCTTTGCCAGTTGTTaGCACTTCGGGGAATCTTTGCCGTTGAAAACAGCCGGACCCATT +
Preference number: 5 (lower is better)
Translates to: ADGRGRANRLFFASC*HFGESLPLKTAGPI
Trigger: AATGGGTCCGGCTGTTTTCAACGGCAAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAATAACCTGTTGGCCCTGCCGCGACCATCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS-3UTR CAA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACTCTGGCAAGAACCTCTaGTCAACGGCGCACACCAGG +
Preference number: 5 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNSGKNL*STAHTR
Trigger: CCTGGTGTGCGCCGTTGACAAGAGGTTCTTGCCAGA...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGTCTGGCAAGAACCTCTaGTCAACGGCGCACACCAGG +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVSGKNL*STAHTR
Trigger: CCTGGTGTGCGCCGTTGACAAGAGGTTCTTGCCAGA...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp CCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTCGCCATTCTGGCAAGAACCTCTaGTCAACGGCGCACACCAGG +
Preference number: 5 (lower is better)
Translates to: PKFYHPPAVQPIGQVTRHSGKNL*STAHTR
Trigger: CCTGGTGTGCGCCGTTGACAAGAGGTTCTTGCCAGA...ATGGCGAGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CAA 90 bp GTGCCACCCAGGGCTTCTGATGCAGAAGTGGGGCCTGATTCTGATTCCAGGATGCACTTCGGGGAATCTTaGCCGTTGAAAACAGCCGGA +
Preference number: 5 (lower is better)
Translates to: VPPRASDAEVGPDSDSRMHFGES*PLKTAG
Trigger: TCCGGCTGTTTTCAACGGCAAAGATTCCCCGAAGTG...CATCCTGGAATCAGAATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCACTGCTTCGGGGAGTaGAGGAGGTTCTGCGTGATC +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVHCFGE*RRFCVI
Trigger: GATCACGCAGAACCTCCTCAACTCCCCGAAGCAGTG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGTGGATGTCATGGTCTaGCTGAGCAGGGGGCGGAAA +
Preference number: 5 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNVDVMV*LSRGRK
Trigger: TTTCCGCCCCCTGCTCAGCAAGACCATGACATCCAC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCAGCTGGCCTCCAGGTaGGCTGAAGACAAAGTGGTG +
Preference number: 5 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHQLASR*AEDKVV
Trigger: CACCACTTTGTCTTCAGCCAACCTGGAGGCCAGCTG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCTCTCCCCAGCAGAGTaGACATCCACCACGTTCCAC +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVLSPAE*TSTTFH
Trigger: GTGGAACGTGGTGGATGTCAACTCTGCTGGGGAGAG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACCTCTCCCCAGCAGAGTaGACATCCACCACGTTCCAC +
Preference number: 5 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNLSPAE*TSTTFH
Trigger: GTGGAACGTGGTGGATGTCAACTCTGCTGGGGAGAG...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGCGGGAGAAGGGCTCTaGCACCTCGCTGGCCCGGGT +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTAGEGL*HLAGPG
Trigger: ACCCGGGCCAGCGAGGTGCAAGAGCCCTTCTCCCGC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTATCACGCTGAAGCGGTaGAACCGGCAGAGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSITLKR*NRQSRR
Trigger: CCTCCTGCTCTGCCGGTTCAACCGCTTCAGCGTGAT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCAGCTTCTTTGCATTTTaGCCCTTTCTAAGAGGTAGG +
Preference number: 5 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPSFFAF*PFLRGR
Trigger: CCTACCTCTTAGAAAGGGCAAAAATGCAAAGAAGCT...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCGGAAAGGTAGACTCTTaGCATCTCAACCTTCTCATC +
Preference number: 5 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSGKVDS*HLNLLI
Trigger: GATGAGAAGGTTGAGATGCAAAGAGTCTACCTTTCC...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGAGTGAGCCGAGGTCATaGCACCATTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVSEPRS*HHCTPA
Trigger: GGCTGGAGTGCAATGGTGCAATGACCTCGGCTCACT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp CACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATATGCCCCCTCTGGCCTaGGCCCAAAGAAGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: HTAHYCSKILPSSSCAAHMPPLA*AQRRAG
Trigger: TCCTGCTCTTCTTTGGGCCAAGGCCAGAGGGGGCAT...ATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS TCA 90 bp GTGAGACAGACTGGGAATTCTGGTAGCACGTGTACAAGAGGGGGCTaGCCACGACGTCATTCAGGTTCCCACAGAGGTAAGGGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: VRQTGNSGSTCTRGG*PRRHSGSHRGKGSS
Trigger: GGAACTTCCCTTACCTCTGTGGGAACCTGAATGACGTCGTGGTCAGCCCCCTCTTGTACACGTGCTACCAGAATTCCCAGTCTGTCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000234142.9
ENST00000381483.6
ENST00000381486.7
ENST00000432985.1
CDS GCA 90 bp GTATTCCTTGACAACCAGCACGTGCAAATGGCTGGCACCGTCCATTaGGTGGTACAGATTAAAGAGCCCATGTTCGTGACGGCCGGTGGT +
Preference number: 5 (lower is better)
Translates to: VFLDNQHVQMAGTVH*VVQIKEPMFVTAGG
Trigger: ACCACCGGCCGTCACGAACATGGGCTCTTTAATCTGTACCACGCAATGGACGGTGCCAGCCATTTGCACGTGCTGGTTGTCAAGGAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 90 bp TCTCAAAGGATCCCAGGTCCAGATTTTGGGTGCTGGAATCCGCAATaGAACACACATGGGAGAGGAGCTTCTGCGCTACTGCCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: SQRIPGPDFGCWNPQ*NTHGRGASALLPAG
Trigger: TCCAGCTGGCAGTAGCGCAGAAGCTCCTCTCCCATGTGTGTTCCATTGCGGATTCCAGCACCCAAAATCTGGACCTGGGATCCTTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGGCCTGGGCACCAGGTaGTTGGACCGCAGGGATGCC +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTGLGTR*LDRRDA
Trigger: GGCATCCCTGCGGTCCAACAACCTGGTGCCCAGGCC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp CCAGGGCTTCTGATGCAGAAGTGGGGCCTGATTCTGATTCCAGGATGGGTCCATTCTTCCTCTTCCTCATaGTCCACTCGGCTACCACCT +
Preference number: 5 (lower is better)
Translates to: PGLLMQKWGLILIPGWVHSSSSS*STRLPP
Trigger: AGGTGGTAGCCGAGTGGACAATGAGGAAGAGGAAGA...ATGGACCCATCCTGGAATCAGAATCAGGCCCCACTTCTGCATCAGAAGCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGACATCCATGGGCTCGTaGGAAATGGAGACAAGGCGC +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVTSMGS*EMETRR
Trigger: GCGCCTTGTCTCCATTTCCAACGAGCCCATGGATGT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp CCAAACACTTGCTGGTGCCACCCAGGGCTTCTGATGCAGAAGTGGGGCCTGATTAGAGCATTGTGGCCATaGTCATCTGGCAAGAACCTC +
Preference number: 5 (lower is better)
Translates to: PNTCWCHPGLLMQKWGLIRALWP*SSGKNL
Trigger: GAGGTTCTTGCCAGATGACAATGGCCACAATGCTCT...AATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp TGGACAGTCCCTGGGGTCCATTCCAGTCAAACGCCCCACCGTTCCAGGCCTCCCTTAAATATCACTGGCTaGGCCTTGCATATTTTCAGC +
Preference number: 5 (lower is better)
Translates to: WTVPGVHSSQTPHRSRPPLNITG*ALHIFS
Trigger: GCTGAAAATATGCAAGGCCAAGCCAGTGATATTTAA...GGGAGGCCTGGAACGGTGGGGCGTTTGACTGGAATGGACCCCAGGGACTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGGAAAGAATCCGGGCTaGGTATTTTCCGGTGACGGC +
Preference number: 5 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNGKNPG*VFSGDG
Trigger: GCCGTCACCGGAAAATACCAAGCCCGGATTCTTTCC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGGAAAGAATCCGGGCTaGGTATTTTCCGGTGACGGC +
Preference number: 5 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHGKNPG*VFSGDG
Trigger: GCCGTCACCGGAAAATACCAAGCCCGGATTCTTTCC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGAGCTCCTCATCCTCGTaGTCTGTGCTGCTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVSSSSS*SVLLSF
Trigger: GAAGCTGAGCAGCACAGACAACGAGGATGAGGAGCT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGTGGATGTCATGGTCTaGCTGAGCAGGGGGCGGAAA +
Preference number: 5 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSVDVMV*LSRGRK
Trigger: TTTCCGCCCCCTGCTCAGCAAGACCATGACATCCAC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACTTGTACGCTGCGTACTaGGACAGTCTCATCCGTGCC +
Preference number: 5 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHLYAAY*DSLIRA
Trigger: GGCACGGATGAGACTGTCCAAGTACGCAGCGTACAA...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCAGCTGGCCTCCAGGTaGGCTGAAGACAAAGTGGTG +
Preference number: 5 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSQLASR*AEDKVV
Trigger: CACCACTTTGTCTTCAGCCAACCTGGAGGCCAGCTG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCCAACTCCAGCACTGTaGAAGATACTGGGGAGCACC +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVPTPAL*KILGST
Trigger: GGTGCTCCCCAGTATCTTCAACAGTGCTGGAGTTGG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTCGCTGGCCCGGGTCTaGCTGGACCACTTCCGCAGG +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTSLARV*LDHFRR
Trigger: CCTGCGGAAGTGGTCCAGCAAGACCCGGGCCAGCGA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGAGGAACCGGTTCTGGTaGTACTGCACGTTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVRNRFW*YCTFWV
Trigger: GACCCAGAACGTGCAGTACAACCAGAACCGGTTCCT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACAGGAACCGGTTCTGGTaGTACTGCACGTTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHRNRFW*YCTFWV
Trigger: GACCCAGAACGTGCAGTACAACCAGAACCGGTTCCT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTAGTGAGCCGAGGTCATaGCACCATTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSSEPRS*HHCTPA
Trigger: GGCTGGAGTGCAATGGTGCAATGACCTCGGCTCACT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS TCA 90 bp GAGGAGAGCCCTTCCTATGGGCATCAAAGTACAAGATGTGCGCTTTaGTTCTTTCTCCATGAACACACTGCTGCTCAGCCGCCCCGTGTC +
Preference number: 5 (lower is better)
Translates to: EESPSYGHQSTRCAL*FFLHEHTAAQPPRV
Trigger: GACACGGGGCGGCTGAGCAGCAGTGTGTTCATGGAGAAAGAATCAAAGCGCACATCTTGTACTTTGATGCCCATAGGAAGGGCTCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS CCA 90 bp TCTACATCGTCACACAGGAACCGGTTCTGGTTGTACTGCACGTTCTaGGTCAGGTCCACGTTCAGGATGATGAAGTTGTGCACGTGGCAG +
Preference number: 5 (lower is better)
Translates to: STSSHRNRFWLYCTF*VRSTFRMMKLCTWQ
Trigger: CTGCCACGTGCACAACTTCATCATCCTGAACGTGGACCTGACCCAGAACGTGCAGTACAACCAGAACCGGTTCCTGTGTGACGATGTAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 90 bp AGAAATCTGAGATCCCAGGTTCAGGTAACAGTCGACAGACAGCACTaGGTGGTCATGGTTCTTCAGGGACAGCGGGAAGAAGAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: RNLRSQVQVTVDRQH*VVMVLQGQREEEVA
Trigger: AGCCACCTCTTCTTCCCGCTGTCCCTGAAGAACCATGACCACCCAGTGCTGTCTGTCGACTGTTACCTGAACCTGGGATCTCAGATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp GGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGACATCCATGGGCTCGTaGGAAATGGAGACAAGGCGC +
Preference number: 5 (lower is better)
Translates to: GHVLKDTASQGLAKHLLVTSMGS*EMETRR
Trigger: GCGCCTTGTCTCCATTTCCAACGAGCCCATGGATGT...CACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp GGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGAAACAGCCGGACCCATaGCTGCGTTTAGTGAGGGGT +
Preference number: 5 (lower is better)
Translates to: GHVLKDTASQGLAKHLLVKQPDP*LRLVRG
Trigger: ACCCCTCACTAAACGCAGCAATGGGTCCGGCTGTTT...CACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCACTTCGGGGAATCTTaGCCGTTGAAAACAGCCGGA +
Preference number: 5 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHHFGES*PLKTAG
Trigger: TCCGGCTGTTTTCAACGGCAAAGATTCCCCGAAGTG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACCACTTCGGGGAATCTTaGCCGTTGAAAACAGCCGGA +
Preference number: 5 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNHFGES*PLKTAG
Trigger: TCCGGCTGTTTTCAACGGCAAAGATTCCCCGAAGTG...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp CTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCACCCAGGGCTTCTGATGGTTATTCTTTGCCAGTaGTTGGCACTTCGGGGAATC +
Preference number: 5 (lower is better)
Translates to: LLLKGLPNTCWCHPGLLMVILCQ*LALRGI
Trigger: GATTCCCCGAAGTGCCAACAACTGGCAAAGAATAAC...CATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACTTCACCTCCCTGCAGTaGAGCAATCGGTCCACCAAT +
Preference number: 5 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNFTSLQ*SNRSTN
Trigger: ATTGGTGGACCGATTGCTCAACTGCAGGGAGGTGAA...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTTTGTACGCTGCGTACTaGGACAGTCTCATCCGTGCC +
Preference number: 5 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSLYAAY*DSLIRA
Trigger: GGCACGGATGAGACTGTCCAAGTACGCAGCGTACAA...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCCAACTCCAGCACTGTaGAAGATACTGGGGAGCACC +
Preference number: 5 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSPTPAL*KILGST
Trigger: GGTGCTCCCCAGTATCTTCAACAGTGCTGGAGTTGG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTTTCAGGATGATGAAGTaGTGCACGTGGCAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSFRMMK*CTWQRE
Trigger: CTCCCGCTGCCACGTGCACAACTTCATCATCCTGAA...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCTGTGCACCCGCAGGTaGAAGTCTACATCGTCACAC +
Preference number: 5 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSLCTRR*KSTSSH
Trigger: GTGTGACGATGTAGACTTCAACCTGCGGGTGCACAG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp ACGCCCCACCGTTCCAGGCCTCCCTTTAGCCTCAACAGCATGAGGGCTCTGAGCTGTTCCTTTGGAATATaGCTTTGTAGGAGGTTACAG +
Preference number: 5 (lower is better)
Translates to: TPHRSRPPFSLNSMRALSCSFGI*LCRRLQ
Trigger: CTGTAACCTCCTACAAAGCAATATTCCAAAGGAACA...GCTCAGAGCCCTCATGCTGTTGAGGCTAAAGGGAGGCCTGGAACGGTGGGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 90 bp ACAATTCCCAGAGAAACCAAGAAGAGCATTGTGGCCATTGTCATCTaGCAAGAACCTCTTGTCAACGGCGCACACCAGGAGATGGTCCGG +
Preference number: 5 (lower is better)
Translates to: TIPRETKKSIVAIVI*QEPLVNGAHQEMVR
Trigger: CCGGACCATCTCCTGGTGTGCGCCGTTGACAAGAGGTTCTTGCCAGATGACAATGGCCACAATGCTCTTCTTGGTTTCTCTGGGAATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CCA 90 bp GAAAGTCCACCTTCTCAAAGGATCCCAGGTCCAGATTTTGGGTGCTaGAATCCGCAATGGAACACACATGGGAGAGGAGCTTCTGCGCTA +
Preference number: 5 (lower is better)
Translates to: ESPPSQRIPGPDFGC*NPQWNTHGRGASAL
Trigger: TAGCGCAGAAGCTCCTCTCCCATGTGTGTTCCATTGCGGATTCCAGCACCCAAAATCTGGACCTGGGATCCTTTGAGAAGGTGGACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS-3UTR CAA 90 bp CCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCAGCTGTGACATCCATGGGCTCGTaGGAAATGGAGACAAGGCGC +
Preference number: 5 (lower is better)
Translates to: PNNTLPTIAPKFYHPPAVTSMGS*EMETRR
Trigger: GCGCCTTGTCTCCATTTCCAACGAGCCCATGGATGT...CACAGCTGGAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CAA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACAGAGCATTGTGGCCATaGTCATCTGGCAAGAACCTC +
Preference number: 5 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNRALWP*SSGKNL
Trigger: GAGGTTCTTGCCAGATGACAATGGCCACAATGCTCT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGAGAGCATTGTGGCCATaGTCATCTGGCAAGAACCTC +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVRALWP*SSGKNL
Trigger: GAGGTTCTTGCCAGATGACAATGGCCACAATGCTCT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp CCAGGGCTTCTGATGCAGAAGTGGGGCCTGATTCTGATTCCAGGATGGGTCCATAAACCAAGAAGAGCATaGTGGCCATTGTCATCTGGC +
Preference number: 5 (lower is better)
Translates to: PGLLMQKWGLILIPGWVHKPRRA*WPLSSG
Trigger: GCCAGATGACAATGGCCACAATGCTCTTCTTGGTTT...ATGGACCCATCCTGGAATCAGAATCAGGCCCCACTTCTGCATCAGAAGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp CACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATCACTTCGGGGAATCTTaGCCGTTGAAAACAGCCGGA +
Preference number: 5 (lower is better)
Translates to: HTAHYCSKILPSSSCAAHHFGES*PLKTAG
Trigger: TCCGGCTGTTTTCAACGGCAAAGATTCCCCGAAGTG...ATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTCTGTTCCCACCACCTaGGGGGCAGCCACCATCTGG +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTSVPTT*GAATIW
Trigger: CCAGATGGTGGCTGCCCCCAAGGTGGTGGGAACAGA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTTCTGTTCCCACCACCTaGGGGGCAGCCACCATCTGG +
Preference number: 5 (lower is better)
Translates to: VCVCVCVCVLSCTPGTPFSVPTT*GAATIW
Trigger: CCAGATGGTGGCTGCCCCCAAGGTGGTGGGAACAGA...AAATGGAGTACCTGGAGTACAAGATAACACACACACACACACACACACACACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACACAAAGTGGTGCTCCTaGGACTTGGGGATGATGAAG +
Preference number: 5 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHTKWCS*DLGMMK
Trigger: CTTCATCATCCCCAAGTCCAAGGAGCACCACTTTGT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGCCATCTCGTATTCCTaGACAACCAGCACGTGCAAA +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVAISYS*TTSTCK
Trigger: TTTGCACGTGCTGGTTGTCAAGGAATACGAGATGGC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGTAATCCCAGCACTTTaGGAGGATGAGGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSVIPAL*EDEVGR
Trigger: TCTGCCCACCTCATCCTCCAAAAGTGCTGGGATTAC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTGGGCTTGCCAAACACTaGCTGGTGCCACCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: VCVCVCVCVLSCTPGTPFGLAKH*LVPPRA
Trigger: AGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCC...AAATGGAGTACCTGGAGTACAAGATAACACACACACACACACACACACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS TCA 90 bp GGTTATTCTTTGCCAGTTGTTGGCACTTCGGGGAATCTTTGCCGTTaGAAACAGCCGGACCCATTGCTGCGTTTAGTGAGGGGTGATCAG +
Preference number: 5 (lower is better)
Translates to: GYSLPVVGTSGNLCR*KQPDPLLRLVRGDQ
Trigger: CTGATCACCCCTCACTAAACGCAGCAATGGGTCCGGCTGTTTTCAACGGCAAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAATAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS TCA 90 bp GGCCTCAAAGGAGCTATCGTATCTGAGCAAGGGGAGGCTGTGTCCTaGAAGGGTGGATTCAATAAACTCCGACAGCCCGAAGTACTTCTT +
Preference number: 5 (lower is better)
Translates to: GLKGAIVSEQGEAVS*KGGFNKLRQPEVLL
Trigger: AAGAAGTACTTCGGGCTGTCGGAGTTTATTGAATCCACCCTTTCAGGACACAGCCTCCCCTTGCTCAGATACGATAGCTCCTTTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS CCA 90 bp AAGCTCCGGGGCGATGCAGGTTCTGCCGGACCAAGGGCTACCATTTaGGTAGCACCATTTACAAATACTTTAAATATCACTGGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: KLRGDAGSAGPRATI*VAPFTNTLNITGLA
Trigger: GGCCAAGCCAGTGATATTTAAAGTATTTGTAAATGGTGCTACCCAAATGGTAGCCCTTGGTCCGGCAGAACCTGCATCGCCCCGGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGATGCCTCGATGGAATaGTGCAAGACCTCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNDASME*CKTSSK
Trigger: CTTTGAAGAGGTCTTGCACAATTCCATCGAGGCATC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp GATTCAGAAGCCCATGTTCTTCCCCAACAACACACTGCCCACTATTGCTCCAAAAAACAGCCGGACCCATaGCTGCGTTTAGTGAGGGGT +
Preference number: 5 (lower is better)
Translates to: DSEAHVLPQQHTAHYCSKKQPDP*LRLVRG
Trigger: ACCCCTCACTAAACGCAGCAATGGGTCCGGCTGTTT...TTTGGAGCAATAGTGGGCAGTGTGTTGTTGGGGAAGAACATGGGCTTCTGAATC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CAA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACGTTATTCTTTGCCAGTaGTTGGCACTTCGGGGAATC +
Preference number: 5 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHVILCQ*LALRGI
Trigger: GATTCCCCGAAGTGCCAACAACTGGCAAAGAATAAC...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCCAACAGGTTATTCTTaGCCAGTTGTTGGCACTTCG +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVPTGYS*PVVGTS
Trigger: CGAAGTGCCAACAACTGGCAAAGAATAACCTGTTGG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TGCTCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTCGCCAACAGGTTATTCTTaGCCAGTTGTTGGCACTTCG +
Preference number: 5 (lower is better)
Translates to: CSKILPSSSCAAHRTGHSPTGYS*PVVGTS
Trigger: CGAAGTGCCAACAACTGGCAAAGAATAACCTGTTGG...CGAGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTTGGTCTTGGCAAGCTaGCCCTCGACCAACAGCCGG +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTLVLAS*PSTNSR
Trigger: CCGGCTGTTGGTCGAGGGCAAGCTTGCCAAGACCAA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGCACCGACGGGTCACTTaGAGAATAGAGGTTATGAAC +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVHRRVT*RIEVMN
Trigger: GTTCATAACCTCTATTCTCAAAGTGACCCGTCGGTG...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTATGTCGTACACGAGCTaGGGCAAGAAGACAATGGGT +
Preference number: 5 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSMSYTS*GKKTMG
Trigger: ACCCATTGTCTTCTTGCCCAAGCTCGTGTACGACAT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGCCATCTCGTATTCCTaGACAACCAGCACGTGCAAA +
Preference number: 5 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSAISYS*TTSTCK
Trigger: TTTGCACGTGCTGGTTGTCAAGGAATACGAGATGGC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGAGTTATCAGACACCTaGGATGTGATGTGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVELSDT*DVMWKD
Trigger: GTCCTTCCACATCACATCCAAGGTGTCTGATAACTC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCGGTCTTCCCTGGCATaGGCGGTCTGGAACTCATCG +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTRSSLA*AVWNSS
Trigger: CGATGAGTTCCAGACCGCCAATGCCAGGGAAGACCG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGTACAGGGGAACCTACTaGGCTGAAATCCCATCTACT +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVYRGTY*AEIPST
Trigger: AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTA...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS GCA 90 bp GTGTCTAGCTTCAGAACATACTGTTCCACCCTCTGCTTCGTCATGTaGTCTTTCTTCAGACCAAGCTCCAGCAAAACCCCTGAATGCCAC +
Preference number: 5 (lower is better)
Translates to: VSSFRTYCSTLCFVM*SFFRPSSSKTPECH
Trigger: GTGGCATTCAGGGGTTTTGCTGGAGCTTGGTCTGAAGAAAGAGCACATGACGAAGCAGAGGGTGGAACAGTATGTTCTGAAGCTAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS CCA 90 bp CAAATGAGAAAGTCCACCTTCTCAAAGGATCCCAGGTCCAGATTTTaGGTGCTGGAATCCGCAATGGAACACACATGGGAGAGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: QMRKSTFSKDPRSRF*VLESAMEHTWERSF
Trigger: GAAGCTCCTCTCCCATGTGTGTTCCATTGCGGATTCCAGCACCCAAAATCTGGACCTGGGATCCTTTGAGAAGGTGGACTTTCTCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS CCA 90 bp GTGAATGATGTAGTCAAAGGGCAACTTCTTGAACAGCTCCAGGTCTaGCCAGGGGTCGCTAAGCTGGAGATAATGCCAGTCAGATTCTTC +
Preference number: 5 (lower is better)
Translates to: VNDVVKGQLLEQLQV*PGVAKLEIMPVRFF
Trigger: GAAGAATCTGACTGGCATTATCTCCAGCTTAGCGACCCCTGGCCAGACCTGGAGCTGTTCAAGAAGTTGCCCTTTGACTACATCATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 90 bp ACCCTCCTGGAGCCTAGGATGAGAGGAGTCACCTTTTCTAACCAATaGGGCTGTGCCACTTGCTGGTTCATTTCGTCCAATCCTCTTATT +
Preference number: 5 (lower is better)
Translates to: TLLEPRMRGVTFSNQ*GCATCWFISSNPLI
Trigger: AATAAGAGGATTGGACGAAATGAACCAGCAAGTGGCACAGCCCCATTGGTTAGAAAAGGTGACTCCTCTCATCCTAGGCTCCAGGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432985.1
CDS-3UTR CAA 90 bp ATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCATGACCCTAGGCCTGGGCACCAGGTaGTTGGACCGCAGGGATGCC +
Preference number: 5 (lower is better)
Translates to: MIVSINFGSCILSLTMTLGLGTR*LDRRDA
Trigger: GGCATCCCTGCGGTCCAACAACCTGGTGCCCAGGCC...TAGGGTCATGGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTTCTGGCAAGAACCTCTaGTCAACGGCGCACACCAGG +
Preference number: 5 (lower is better)
Translates to: VCVCVCVCVLSCTPGTPFSGKNL*STAHTR
Trigger: CCTGGTGTGCGCCGTTGACAAGAGGTTCTTGCCAGA...AAATGGAGTACCTGGAGTACAAGATAACACACACACACACACACACACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp CCATTACCACAGGTGTCTCACTGCTCCTTGGCACATACGGTAACTCCCAAGTGTAAACCAAGAAGAGCATaGTGGCCATTGTCATCTGGC +
Preference number: 5 (lower is better)
Translates to: PLPQVSHCSLAHTVTPKCKPRRA*WPLSSG
Trigger: GCCAGATGACAATGGCCACAATGCTCTTCTTGGTTT...ACACTTGGGAGTTACCGTATGTGCCAAGGAGCAGTGAGACACCTGTGGTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CAA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCAGATTAAAGGTCCTTaGGTTAGAGTCCCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHQIKGP*VRVPCA
Trigger: TGCACAAGGGACTCTAACCAAAGGACCTTTAATCTG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TTCCCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCAGCTGGGGAATCTTTGCCGTaGAAAACAGCCGGACCCATT +
Preference number: 5 (lower is better)
Translates to: FPNNTLPTIAPKFYHPPAGESLP*KTAGPI
Trigger: AATGGGTCCGGCTGTTTTCAACGGCAAAGATTCCCC...AGCTGGAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGATTCTTTGCCAGTTGTaGGCACTTCGGGGAATCTTT +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVILCQL*ALRGIF
Trigger: AAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAAT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TGGGGCACAGGTCACGTTCTCAAAGACACTGCTTCTCAAGGGCTTGCCAAACACATTCTTTGCCAGTTGTaGGCACTTCGGGGAATCTTT +
Preference number: 5 (lower is better)
Translates to: WGTGHVLKDTASQGLAKHILCQL*ALRGIF
Trigger: AAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAAT...GTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTTTGAGAACGTGACCTGTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp CCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTCGCCATATTCTTTGCCAGTTGTaGGCACTTCGGGGAATCTTT +
Preference number: 5 (lower is better)
Translates to: PKFYHPPAVQPIGQVTRHILCQL*ALRGIF
Trigger: AAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAAT...ATGGCGAGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CAA 90 bp ATGCAGAAGTGGGGCCTGATTCTGATTCCAGGATGGGTCCATGAATTCACGCCTCCAACAGGTTATTCTTaGCCAGTTGTTGGCACTTCG +
Preference number: 5 (lower is better)
Translates to: MQKWGLILIPGWVHEFTPPTGYS*PVVGTS
Trigger: CGAAGTGCCAACAACTGGCAAAGAATAACCTGTTGG...AGGCGTGAATTCATGGACCCATCCTGGAATCAGAATCAGGCCCCACTTCTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp AAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCACCCAGGGCTTCATATTTTCAGCAAGTaGTCAGGAACAGACACTGGT +
Preference number: 5 (lower is better)
Translates to: KTLLLKGLPNTCWCHPGLHIFSK*SGTDTG
Trigger: ACCAGTGTCTGTTCCTGACAACTTGCTGAAAATATG...AAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACATCACTGGCTTGGCCTaGCATATTTTCAGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNITGLA*HIFSKL
Trigger: CAACTTGCTGAAAATATGCAAGGCCAAGCCAGTGAT...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp CCAAACACTTGCTGGTGCCACCCAGGGCTTCTGATGCAGAAGTGGGGCCTGATTTTAAATATCACTGGCTaGGCCTTGCATATTTTCAGC +
Preference number: 5 (lower is better)
Translates to: PNTCWCHPGLLMQKWGLILNITG*ALHIFS
Trigger: GCTGAAAATATGCAAGGCCAAGCCAGTGATATTTAA...AATCAGGCCCCACTTCTGCATCAGAAGCCCTGGGTGGCACCAGCAAGTGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTCACCGACGGGTCACTTaGAGAATAGAGGTTATGAAC +
Preference number: 5 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSHRRVT*RIEVMN
Trigger: GTTCATAACCTCTATTCTCAAAGTGACCCGTCGGTG...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGGCTGGCGGCAGGCCTaGGTCAAGGAGCACTGGGAG +
Preference number: 5 (lower is better)
Translates to: STEILAPLQNNPRFFRTKGWRQA*VKEHWE
Trigger: CTCCCAGTGCTCCTTGACCAAGGCCTGCCGCCAGCC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGTGGATGTCATGGTCTaGCTGAGCAGGGGGCGGAAA +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTVDVMV*LSRGRK
Trigger: TTTCCGCCCCCTGCTCAGCAAGACCATGACATCCAC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACGATTCTTCTCTGAGGTaGATATTGATCTCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNDSSLR*ILISSS
Trigger: CGAGGAGGAGATCAATATCAACCTCAGAGAAGAATC...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGATTCTTCTCTGAGGTaGATATTGATCTCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVDSSLR*ILISSS
Trigger: CGAGGAGGAGATCAATATCAACCTCAGAGAAGAATC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCAGCTGGCCTCCAGGTaGGCTGAAGACAAAGTGGTG +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTQLASR*AEDKVV
Trigger: CACCACTTTGTCTTCAGCCAACCTGGAGGCCAGCTG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGATATATTCATGGCTCTaGTCTGTCACGAGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVIYSWL*SVTRGS
Trigger: ACTACCCCTCGTGACAGACAAGAGCCATGAATATAT...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACATATATTCATGGCTCTaGTCTGTCACGAGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHIYSWL*SVTRGS
Trigger: ACTACCCCTCGTGACAGACAAGAGCCATGAATATAT...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp AAGACACTGCTTCTCAAGGGCTTGCCAAACACTTGCTGGTGCCACCCAGGGCTTTGTGTGTGTGTTATCTaGTACTCCAGGTACTCCATT +
Preference number: 5 (lower is better)
Translates to: KTLLLKGLPNTCWCHPGLCVCVI*YSRYSI
Trigger: AATGGAGTACCTGGAGTACAAGATAACACACACACA...AAGCCCTGGGTGGCACCAGCAAGTGTTTGGCAAGCCCTTGAGAAGCAGTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp CTCGCCATTACCACAGGTGTCTCACTGCTCCTTGGCACATACGGTAACTCCCAACCACCTGAACTCACTTaGTTGTTTTCTGCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: LAITTGVSLLLGTYGNSQPPELT*LFSAPN
Trigger: GTTTGGAGCAGAAAACAACAAAGTGAGTTCAGGTGG...TTGGGAGTTACCGTATGTGCCAAGGAGCAGTGAGACACCTGTGGTAATGGCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CAA 90 bp ATTCTACCATCCTCCAGCTGTGCAGCCCATAGGACAGGTCACTCGCCATTACCAACACACTGCCCACTATaGCTCCAAAATTCTACCATC +
Preference number: 5 (lower is better)
Translates to: ILPSSSCAAHRTGHSPLPTHCPL*LQNSTI
Trigger: GATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGT...TGGTAATGGCGAGTGACCTGTCCTATGGGCTGCACAGCTGGAGGATGGTAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS TCA 90 bp CTGGCACCGTCCATTGCGTGGTACAGATTAAAGAGCCCATGTTCGTaGCGGCCGGTGGTTGGAGTGAATGTCGGACTTTTTATATATTCA +
Preference number: 5 (lower is better)
Translates to: LAPSIAWYRLKSPCS*RPVVGVNVGLFIYS
Trigger: TGAATATATAAAAAGTCCGACATTCACTCCAACCACCGGCCGTCACGAACATGGGCTCTTTAATCTGTACCACGCAATGGACGGTGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp GTCTCCGCATTTGTAAAACCAGGTGAAGCGGTGAAGCTATCAAATCCTCTCGGGGATGCCTCGATGGAATaGTGCAAGACCTCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: VSAFVKPGEAVKLSNPLGDASME*CKTSSK
Trigger: CTTTGAAGAGGTCTTGCACAATTCCATCGAGGCATC...CCCGAGAGGATTTGATAGCTTCACCGCTTCACCTGGTTTTACAAATGCGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp GATTCAGAAGCCCATGTTCTTCCCCAACAACACACTGCCCACTATTGCTCCAAAAGAGCATTGTGGCCATaGTCATCTGGCAAGAACCTC +
Preference number: 5 (lower is better)
Translates to: DSEAHVLPQQHTAHYCSKRALWP*SSGKNL
Trigger: GAGGTTCTTGCCAGATGACAATGGCCACAATGCTCT...TTTGGAGCAATAGTGGGCAGTGTGTTGTTGGGGAAGAACATGGGCTTCTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CAA 90 bp ATGCAGAAGTGGGGCCTGATTCTGATTCCAGGATGGGTCCATGAATTCACGCCTCAGATTAAAGGTCCTTaGGTTAGAGTCCCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: MQKWGLILIPGWVHEFTPQIKGP*VRVPCA
Trigger: TGCACAAGGGACTCTAACCAAAGGACCTTTAATCTG...AGGCGTGAATTCATGGACCCATCCTGGAATCAGAATCAGGCCCCACTTCTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp AACACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCCAGATTAAAGGTCCTTaGGTTAGAGTCCCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: NTLPTIAPKFYHPPAVQPQIKGP*VRVPCA
Trigger: TGCACAAGGGACTCTAACCAAAGGACCTTTAATCTG...GGGCTGCACAGCTGGAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTATTCTTTGCCAGTTGTaGGCACTTCGGGGAATCTTT +
Preference number: 5 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSILCQL*ALRGIF
Trigger: AAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAAT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TATAGAACGTTACTTCCTTCGCCTAAATTCTCAAAGGTGGATTTACAGAACCAGTCTGTTCCCACCACCTaGGGGGCAGCCACCATCTGG +
Preference number: 5 (lower is better)
Translates to: YRTLLPSPKFSKVDLQNQSVPTT*GAATIW
Trigger: CCAGATGGTGGCTGCCCCCAAGGTGGTGGGAACAGA...CTGGTTCTGTAAATCCACCTTTGAGAATTTAGGCGAAGGAAGTAACGTTCTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACCATATTTTCAGCAAGTaGTCAGGAACAGACACTGGT +
Preference number: 5 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHHIFSK*SGTDTG
Trigger: ACCAGTGTCTGTTCCTGACAACTTGCTGAAAATATG...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGCTCCAGATTGTAACTaGTGCACACCGGTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTAPDCN*CTPVSH
Trigger: GTGGGACACCGGTGTGCACAAGTTACAATCTGGAGC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTTGTACGCTGCGTACTaGGACAGTCTCATCCGTGCC +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTLYAAY*DSLIRA
Trigger: GGCACGGATGAGACTGTCCAAGTACGCAGCGTACAA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTATATATTCATGGCTCTaGTCTGTCACGAGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSIYSWL*SVTRGS
Trigger: ACTACCCCTCGTGACAGACAAGAGCCATGAATATAT...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTTCAGGATGATGAAGTaGTGCACGTGGCAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTFRMMK*CTWQRE
Trigger: CTCCCGCTGCCACGTGCACAACTTCATCATCCTGAA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTAGGAACCGGTTCTGGTaGTACTGCACGTTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTRNRFW*YCTFWV
Trigger: GACCCAGAACGTGCAGTACAACCAGAACCGGTTCCT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCTGTGCACCCGCAGGTaGAAGTCTACATCGTCACAC +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTLCTRR*KSTSSH
Trigger: GTGTGACGATGTAGACTTCAACCTGCGGGTGCACAG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp ATGTTCTTCCCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATCCTGTGTCTCACTGCTCCTaGGCACATACGGTAACTCCC +
Preference number: 5 (lower is better)
Translates to: MFFPNNTLPTIAPKFYHPVSHCS*AHTVTP
Trigger: GGGAGTTACCGTATGTGCCAAGGAGCAGTGAGACAC...AGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGGGAAGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS GCA 90 bp TCAAGAGGATGGAGTCTTCTGTTTAAAATGGCATCTCAGATTCGGTaGAAAAGCCTGGCTCCACGCAAGGTAGAAGGTGAAACAGCTGCA +
Preference number: 5 (lower is better)
Translates to: SRGWSLLFKMASQIR*KSLAPRKVEGETAA
Trigger: TGCAGCTGTTTCACCTTCTACCTTGCGTGGAGCCAGGCTTTTGCACCGAATCTGAGATGCCATTTTAAACAGAAGACTCCATCCTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000628795.2
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTTCTTCCTCTTCCTCATaGTCCACTCGGCTACCACCT +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTSSSSS*STRLPP
Trigger: AGGTGGTAGCCGAGTGGACAATGAGGAAGAGGAAGA...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp ATGTTCTTCCCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATCCTTCTTCCTCTTCCTCATaGTCCACTCGGCTACCACCT +
Preference number: 5 (lower is better)
Translates to: MFFPNNTLPTIAPKFYHPSSSSS*STRLPP
Trigger: AGGTGGTAGCCGAGTGGACAATGAGGAAGAGGAAGA...AGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGGGAAGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CAA 90 bp ACCGCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGACATCCATGGGCTCGTaGGAAATGGAGACAAGGCGC +
Preference number: 5 (lower is better)
Translates to: TAPKHHWVPSFGLLIQKKTSMGS*EMETRR
Trigger: GCGCCTTGTCTCCATTTCCAACGAGCCCATGGATGT...CTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp GCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGATGTCTGGCAAGAACCTCTaGTCAACGGCGCACACCAGG +
Preference number: 5 (lower is better)
Translates to: APKHHWVPSFGLLIQKKMSGKNL*STAHTR
Trigger: CCTGGTGTGCGCCGTTGACAAGAGGTTCTTGCCAGA...CATCTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTGGGGAATCTTTGCCGTaGAAAACAGCCGGACCCATT +
Preference number: 5 (lower is better)
Translates to: VCVCVCVCVLSCTPGTPFGESLP*KTAGPI
Trigger: AATGGGTCCGGCTGTTTTCAACGGCAAAGATTCCCC...AAATGGAGTACCTGGAGTACAAGATAACACACACACACACACACACACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGGGGAATCTTTGCCGTaGAAAACAGCCGGACCCATT +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTGESLP*KTAGPI
Trigger: AATGGGTCCGGCTGTTTTCAACGGCAAAGATTCCCC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp GTGGATTTACAGAACCAGCTACTACATATCATCAGATTGCTTCCCAAGAGCCTGCACTTCGGGGAATCTTaGCCGTTGAAAACAGCCGGA +
Preference number: 5 (lower is better)
Translates to: VDLQNQLLHIIRLLPKSLHFGES*PLKTAG
Trigger: TCCGGCTGTTTTCAACGGCAAAGATTCCCCGAAGTG...CAGGCTCTTGGGAAGCAATCTGATGATATGTAGTAGCTGGTTCTGTAAATCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp GTTCTTCCCCAACAACACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCGTTATTCTTTGCCAGTaGTTGGCACTTCGGGGAATC +
Preference number: 5 (lower is better)
Translates to: VLPQQHTAHYCSKILPSSVILCQ*LALRGI
Trigger: GATTCCCCGAAGTGCCAACAACTGGCAAAGAATAAC...GGAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTGTTGTTGGGGAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CAA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGTCTGTTCCCACCACCTaGGGGGCAGCCACCATCTGG +
Preference number: 5 (lower is better)
Translates to: STEILAPLQNNPRFFRTKSVPTT*GAATIW
Trigger: CCAGATGGTGGCTGCCCCCAAGGTGGTGGGAACAGA...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TTCATTCTGAGGACAGCCCTCAGAGGTGGAATTGCCCAGGTCGGGTTCAAATATATCACTGGCTTGGCCTaGCATATTTTCAGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: FILRTALRGGIAQVGFKYITGLA*HIFSKL
Trigger: CAACTTGCTGAAAATATGCAAGGCCAAGCCAGTGAT...ATATTTGAACCCGACCTGGGCAATTCCACCTCTGAGGGCTGTCCTCAGAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp GCCCAGAGCAATGGGCTGGCCCAGAACTTGGGAGTCTCAAGTTTTCATTCTCACTTAAATATCACTGGCTaGGCCTTGCATATTTTCAGC +
Preference number: 5 (lower is better)
Translates to: AQSNGLAQNLGVSSFHSHLNITG*ALHIFS
Trigger: GCTGAAAATATGCAAGGCCAAGCCAGTGATATTTAA...GTGAGAATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCCATTGCTCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGCGAGGAACGTGTGCTaGCTGTCCGGGGCACAGATG +
Preference number: 5 (lower is better)
Translates to: STEILAPLQNNPRFFRTKARNVC*LSGAQM
Trigger: CATCTGTGCCCCGGACAGCAAGCACACGTTCCTCGC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGGGCTGGCCCAGAACTaGGGAGTCTCAAGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTGLAQN*GVSSFH
Trigger: ATGAAAACTTGAGACTCCCAAGTTCTGGGCCAGCCC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp CAAGTGGGAGAAGGGAGACCTGGACTGCAGAGTCCAGAAGCCAGAACTTTGAACTGTTCCTTTGGAATATaGCTTTGTAGGAGGTTACAG +
Preference number: 5 (lower is better)
Translates to: QVGEGRPGLQSPEARTLNCSFGI*LCRRLQ
Trigger: CTGTAACCTCCTACAAAGCAATATTCCAAAGGAACA...GTTCAAAGTTCTGGCTTCTGGACTCTGCAGTCCAGGTCTCCCTTCTCCCACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGTAATCCCAGCACTTTaGGAGGATGAGGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTVIPAL*EDEVGR
Trigger: TCTGCCCACCTCATCCTCCAAAAGTGCTGGGATTAC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp CACACTGCCCACTATTGCTCCAAAATTCTACCATCCTCCAGCTGTGCAGCCCATATGAAGAAACATTTATaGAGACTTGGCCAAGGTCCC +
Preference number: 5 (lower is better)
Translates to: HTAHYCSKILPSSSCAAHMKKHL*RLGQGP
Trigger: GGGACCTTGGCCAAGTCTCAATAAATGTTTCTTCAT...ATGGGCTGCACAGCTGGAGGATGGTAGAATTTTGGAGCAATAGTGGGCAGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS-3UTR CAA 90 bp GTGGATTTACAGAACCAGCTACTACATATCATCAGATTGCTTCCCAAGAGCCTGGTCCGGATTTCGTATTaGATGTGCCAGCTGGACCAG +
Preference number: 5 (lower is better)
Translates to: VDLQNQLLHIIRLLPKSLVRISY*MCQLDQ
Trigger: CTGGTCCAGCTGGCACATCAAATACGAAATCCGGAC...CAGGCTCTTGGGAAGCAATCTGATGATATGTAGTAGCTGGTTCTGTAAATCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS CCA 90 bp TGCGTGGTACAGATTAAAGAGCCCATGTTCGTGACGGCCGGTGGTTaGAGTGAATGTCGGACTTTTTATATATTCATGGCTCTTGTCTGT +
Preference number: 5 (lower is better)
Translates to: CVVQIKEPMFVTAGG*SECRTFYIFMALVC
Trigger: ACAGACAAGAGCCATGAATATATAAAAAGTCCGACATTCACTCCAACCACCGGCCGTCACGAACATGGGCTCTTTAATCTGTACCACGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp AGGACTGAACAAGATGAACAAGATGATCACTGTCCAGGCGCCGGGCAATGGGTGGTTCTGGAAGGAGTTTaGCAGAAAAGCCTTAAATTT +
Preference number: 5 (lower is better)
Translates to: RTEQDEQDDHCPGAGQWVVLEGV*QKSLKF
Trigger: AAATTTAAGGCTTTTCTGCAAAACTCCTTCCAGAAC...CACCCATTGCCCGGCGCCTGGACAGTGATCATCTTGTTCATCTTGTTCAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTACAAAGTGGTGCTCCTaGGACTTGGGGATGATGAAG +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTTKWCS*DLGMMK
Trigger: CTTCATCATCCCCAAGTCCAAGGAGCACCACTTTGT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGCCATCTCGTATTCCTaGACAACCAGCACGTGCAAA +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTAISYS*TTSTCK
Trigger: TTTGCACGTGCTGGTTGTCAAGGAATACGAGATGGC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS GCA 90 bp TTTTATGAATTGTCTGGTTTATACGTCCGGATTTCGTATTTGATGTaGCAGCTGGACCAGGTAGTAGACGGTAAGCAGGAGCTGCATCTC +
Preference number: 5 (lower is better)
Translates to: FYELSGLYVRISYLM*QLDQVVDGKQELHL
Trigger: GAGATGCAGCTCCTGCTTACCGTCTACTACCTGGTCCAGCTGGCACATCAAATACGAAATCCGGACGTATAAACCAGACAATTCATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp CATATAGAACGTTACTTCCTTCGCCTAAATTCTCAAAGGTGGATTTACAGAACCAAACAGCCGGACCCATaGCTGCGTTTAGTGAGGGGT +
Preference number: 5 (lower is better)
Translates to: HIERYFLRLNSQRWIYRTKQPDP*LRLVRG
Trigger: ACCCCTCACTAAACGCAGCAATGGGTCCGGCTGTTT...GGTTCTGTAAATCCACCTTTGAGAATTTAGGCGAAGGAAGTAACGTTCTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp GCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGATGGGGGAATCTTTGCCGTaGAAAACAGCCGGACCCATT +
Preference number: 5 (lower is better)
Translates to: APKHHWVPSFGLLIQKKMGESLP*KTAGPI
Trigger: AATGGGTCCGGCTGTTTTCAACGGCAAAGATTCCCC...CATCTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp CTGTCAGTCTGTGAAGGGGTGAGCCCTAAGAAATACATCTCCCTGCCTCCTTCTGTTCTGGAAGGAGTTTaGCAGAAAAGCCTTAAATTT +
Preference number: 5 (lower is better)
Translates to: LSVCEGVSPKKYISLPPSVLEGV*QKSLKF
Trigger: AAATTTAAGGCTTTTCTGCAAAACTCCTTCCAGAAC...AGAAGGAGGCAGGGAGATGTATTTCTTAGGGCTCACCCCTTCACAGACTGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp CATATAGAACGTTACTTCCTTCGCCTAAATTCTCAAAGGTGGATTTACAGAACCTCTTCCTCTTCCTCATaGTCCACTCGGCTACCACCT +
Preference number: 5 (lower is better)
Translates to: HIERYFLRLNSQRWIYRTSSSSS*STRLPP
Trigger: AGGTGGTAGCCGAGTGGACAATGAGGAAGAGGAAGA...GGTTCTGTAAATCCACCTTTGAGAATTTAGGCGAAGGAAGTAACGTTCTATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGACATCCATGGGCTCGTaGGAAATGGAGACAAGGCGC +
Preference number: 5 (lower is better)
Translates to: STEILAPLQNNPRFFRTKTSMGS*EMETRR
Trigger: GCGCCTTGTCTCCATTTCCAACGAGCCCATGGATGT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp GCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGATGAGAGCATTGTGGCCATaGTCATCTGGCAAGAACCTC +
Preference number: 5 (lower is better)
Translates to: APKHHWVPSFGLLIQKKMRALWP*SSGKNL
Trigger: GAGGTTCTTGCCAGATGACAATGGCCACAATGCTCT...CATCTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGAAACAGCCGGACCCATaGCTGCGTTTAGTGAGGGGT +
Preference number: 5 (lower is better)
Translates to: STEILAPLQNNPRFFRTKKQPDP*LRLVRG
Trigger: ACCCCTCACTAAACGCAGCAATGGGTCCGGCTGTTT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGATTCTTCTCTGAGGTaGATATTGATCTCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTDSSLR*ILISSS
Trigger: CGAGGAGGAGATCAATATCAACCTCAGAGAAGAATC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGCCAACTCCAGCACTGTaGAAGATACTGGGGAGCACC +
Preference number: 5 (lower is better)
Translates to: STEILAPLQNNPRFFRTKPTPAL*KILGST
Trigger: GGTGCTCCCCAGTATCTTCAACAGTGCTGGAGTTGG...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTGGAAAGGTAGACTCTTaGCATCTCAACCTTCTCATC +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTGKVDS*HLNLLI
Trigger: GATGAGAAGGTTGAGATGCAAAGAGTCTACCTTTCC...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS TCA 90 bp GTAGGGAAAATGTATTCTAGGTTCCAAGCAACCAACACAGAAAAATaGATGTCTGGCTCCCAAGCCACTGGTAAAGTTGAGACTGTCCAA +
Preference number: 5 (lower is better)
Translates to: VGKMYSRFQATNTEK*MSGSQATGKVETVQ
Trigger: TTGGACAGTCTCAACTTTACCAGTGGCTTGGGAGCCAGACATTCATTTTTCTGTGTTGGTTGCTTGGAACCTAGAATACATTTTCCCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470980.1
CDS-3UTR CAA 90 bp GCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGATGGATGCCTCGATGGAATaGTGCAAGACCTCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: APKHHWVPSFGLLIQKKMDASME*CKTSSK
Trigger: CTTTGAAGAGGTCTTGCACAATTCCATCGAGGCATC...CATCTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGGGGAATCTTTGCCGTaGAAAACAGCCGGACCCATT +
Preference number: 5 (lower is better)
Translates to: STEILAPLQNNPRFFRTKGESLP*KTAGPI
Trigger: AATGGGTCCGGCTGTTTTCAACGGCAAAGATTCCCC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTCATATTTTCAGCAAGTaGTCAGGAACAGACACTGGT +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTHIFSK*SGTDTG
Trigger: ACCAGTGTCTGTTCCTGACAACTTGCTGAAAATATG...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TATTGCTTTGTAGGAGGTTACAGGGGAACCTACTTGGCTGAAATCCCATCTACTAGCTTCTTTGCATTTTaGCCCTTTCTAAGAGGTAGG +
Preference number: 5 (lower is better)
Translates to: YCFVGGYRGTYLAEIPSTSFFAF*PFLRGR
Trigger: CCTACCTCTTAGAAAGGGCAAAAATGCAAAGAAGCT...AGTAGATGGGATTTCAGCCAAGTAGGTTCCCCTGTAACCTCCTACAAAGCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp GCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGATGGTCCTCAGCTGCAGTTaGTTGTTTTCTGCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: APKHHWVPSFGLLIQKKMVLSCS*LFSAPN
Trigger: GTTTGGAGCAGAAAACAACAAACTGCAGCTGAGGAC...CATCTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS TCA 90 bp TGGGTTGAGTGGTCAGTTTCAGATTTATATGATTGGAGAATTCCGTaGAGTAACAGAAGCCTTTCTTTCCACAGCCAACACAATTCCCAG +
Preference number: 5 (lower is better)
Translates to: WVEWSVSDLYDWRIP*SNRSLSFHSQHNSQ
Trigger: CTGGGAATTGTGTTGGCTGTGGAAAGAAAGGCTTCTGTTACTTCACGGAATTCTCCAATCATATAAATCTGAAACTGACCACTCAACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS TCA 90 bp TTCCTCCTAATCACTTGTGAGTTCAATATGCTGTGCAAACAGGCCTaGGTAGGGAAAATGTATTCTAGGTTCCAAGCAACCAACACAGAA +
Preference number: 5 (lower is better)
Translates to: FLLITCEFNMLCKQA*VGKMYSRFQATNTE
Trigger: TTCTGTGTTGGTTGCTTGGAACCTAGAATACATTTTCCCTACTCAGGCCTGTTTGCACAGCATATTGAACTCACAAGTGATTAGGAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470980.1
CDS-3UTR CAA 90 bp TATAGAACGTTACTTCCTTCGCCTAAATTCTCAAAGGTGGATTTACAGAACCAGCCAACAGGTTATTCTTaGCCAGTTGTTGGCACTTCG +
Preference number: 5 (lower is better)
Translates to: YRTLLPSPKFSKVDLQNQPTGYS*PVVGTS
Trigger: CGAAGTGCCAACAACTGGCAAAGAATAACCTGTTGG...CTGGTTCTGTAAATCCACCTTTGAGAATTTAGGCGAAGGAAGTAACGTTCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGATGTCGTACACGAGCTaGGGCAAGAAGACAATGGGT +
Preference number: 5 (lower is better)
Translates to: STEILAPLQNNPRFFRTKMSYTS*GKKTMG
Trigger: ACCCATTGTCTTCTTGCCCAAGCTCGTGTACGACAT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp ACCGCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGCTACATATCATCAGATaGCTTCCCAAGAGCCTGAAT +
Preference number: 5 (lower is better)
Translates to: TAPKHHWVPSFGLLIQKKLHIIR*LPKSLN
Trigger: ATTCAGGCTCTTGGGAAGCAATCTGATGATATGTAG...CTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGAAACCAAGAAGAGCATaGTGGCCATTGTCATCTGGC +
Preference number: 5 (lower is better)
Translates to: STEILAPLQNNPRFFRTKKPRRA*WPLSSG
Trigger: GCCAGATGACAATGGCCACAATGCTCTTCTTGGTTT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp ATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCAAACCAAGAAGAGCATaGTGGCCATTGTCATCTGGC +
Preference number: 5 (lower is better)
Translates to: IAAMIVSINFGSCILSLTKPRRA*WPLSSG
Trigger: GCCAGATGACAATGGCCACAATGCTCTTCTTGGTTT...GGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp ATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCATGACCCTAGTTATTCTTTGCCAGTaGTTGGCACTTCGGGGAATC +
Preference number: 5 (lower is better)
Translates to: MIVSINFGSCILSLTMTLVILCQ*LALRGI
Trigger: GATTCCCCGAAGTGCCAACAACTGGCAAAGAATAAC...TAGGGTCATGGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp TATAGAACGTTACTTCCTTCGCCTAAATTCTCAAAGGTGGATTTACAGAACCAGATCACTGGCTTGGCCTaGCATATTTTCAGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: YRTLLPSPKFSKVDLQNQITGLA*HIFSKL
Trigger: CAACTTGCTGAAAATATGCAAGGCCAAGCCAGTGAT...CTGGTTCTGTAAATCCACCTTTGAGAATTTAGGCGAAGGAAGTAACGTTCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGGAGTTATCAGACACCTaGGATGTGATGTGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: STEILAPLQNNPRFFRTKELSDT*DVMWKD
Trigger: GTCCTTCCACATCACATCCAAGGTGTCTGATAACTC...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp GCACCTAAGCACCACTGGGTACCATCATTTGGGTTATTAATTCAGAAAAAGATGCTCAGCTGCAGTTTGTaGTTTTCTGCTCCAAACAAA +
Preference number: 5 (lower is better)
Translates to: APKHHWVPSFGLLIQKKMLSCSL*FSAPNK
Trigger: TTTGTTTGGAGCAGAAAACAACAAACTGCAGCTGAG...CATCTTTTTCTGAATTAATAACCCAAATGATGGTACCCAGTGGTGCTTAGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGATCACTGGCTTGGCCTaGCATATTTTCAGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: STEILAPLQNNPRFFRTKITGLA*HIFSKL
Trigger: CAACTTGCTGAAAATATGCAAGGCCAAGCCAGTGAT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS-3UTR CAA 90 bp TTCTCAAAGGTGGATTTACAGAACCAGCTACTACATATCATCAGATTGCTTCCCTTAAATATCACTGGCTaGGCCTTGCATATTTTCAGC +
Preference number: 5 (lower is better)
Translates to: FSKVDLQNQLLHIIRLLPLNITG*ALHIFS
Trigger: GCTGAAAATATGCAAGGCCAAGCCAGTGATATTTAA...GGGAAGCAATCTGATGATATGTAGTAGCTGGTTCTGTAAATCCACCTTTGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTTATCTTGTACTCCAGGTACTCCATTTAGTCACCAAAAATATACCAAGGGCTACCATTaGGGTAGCACCATTTACAAA +
Preference number: 5 (lower is better)
Translates to: CVCVLSCTPGTPFSHQKYTKGYH*GSTIYK
Trigger: TTTGTAAATGGTGCTACCCAAATGGTAGCCCTTGGT...ATATTTTTGGTGACTAAATGGAGTACCTGGAGTACAAGATAACACACACACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS-3UTR CAA 90 bp AATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCAGATTAAAGGTCCTTaGGTTAGAGTCCCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: NSCNDCQYKLWVLHSFLNQIKGP*VRVPCA
Trigger: TGCACAAGGGACTCTAACCAAAGGACCTTTAATCTG...GTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp AATAGCTGCAATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACATTCTTTGCCAGTTGTaGGCACTTCGGGGAATCTTT +
Preference number: 5 (lower is better)
Translates to: NSCNDCQYKLWVLHSFLNILCQL*ALRGIF
Trigger: AAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAAT...GTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCATTGCAGCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp ATGATTGTCAGTATAAACTTTGGGTCTTGCATTCTTTCCTTAACCATGACCCTACATATTTTCAGCAAGTaGTCAGGAACAGACACTGGT +
Preference number: 5 (lower is better)
Translates to: MIVSINFGSCILSLTMTLHIFSK*SGTDTG
Trigger: ACCAGTGTCTGTTCCTGACAACTTGCTGAAAATATG...TAGGGTCATGGTTAAGGAAAGAATGCAAGACCCAAAGTTTATACTGACAATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp TCTACTGAAATACTGGCACCGCTACAAAATAACCCAAGATTCTTTAGAACTAAGAGCTTCTTTGCATTTTaGCCCTTTCTAAGAGGTAGG +
Preference number: 5 (lower is better)
Translates to: STEILAPLQNNPRFFRTKSFFAF*PFLRGR
Trigger: CCTACCTCTTAGAAAGGGCAAAAATGCAAAGAAGCT...CTTAGTTCTAAAGAATCTTGGGTTATTTTGTAGCGGTGCCAGTATTTCAGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS-3UTR CAA 90 bp TTCTCAAAGGTGGATTTACAGAACCAGCTACTACATATCATCAGATTGCTTCCCTTTCTCTTTTATGAATaGTCTGGTTTATACGTCCGG +
Preference number: 5 (lower is better)
Translates to: FSKVDLQNQLLHIIRLLPFLFYE*SGLYVR
Trigger: CCGGACGTATAAACCAGACAATTCATAAAAGAGAAA...GGGAAGCAATCTGATGATATGTAGTAGCTGGTTCTGTAAATCCACCTTTGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS-3UTR CAA 90 bp TATAGAACGTTACTTCCTTCGCCTAAATTCTCAAAGGTGGATTTACAGAACCAGTCTGCAATGCACATCTaGACATATAGAACGTTACTT +
Preference number: 5 (lower is better)
Translates to: YRTLLPSPKFSKVDLQNQSAMHI*TYRTLL
Trigger: AAGTAACGTTCTATATGTCAAGATGTGCATTGCAGA...CTGGTTCTGTAAATCCACCTTTGAGAATTTAGGCGAAGGAAGTAACGTTCTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS GCA 72 bp GGGGGTGGAAGCCGTCCACGCGGCCCTCGGCCCGGTTaGCGTAGTCCATGTGGCTGGGCCGGGGCACCGTCC +
Preference number: 6 (lower is better)
Translates to: GGGSRPRGPRPG*RSPCGWAGAPS
Trigger: GGACGGTGCCCCGGCCCAGCCACATGGACTACGGCAACCGGGCCGAGGGCCGCGTGGACGGCTTCCACCCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp ACGCTCCTCTGGCCGGTCCTGAGGCTACAGTCGGGCTaGGGCGTCGGCCCGGGACTGTGCCTGCTGATGGCC +
Preference number: 6 (lower is better)
Translates to: TLLWPVLRLQSG*GVGPGLCLLMA
Trigger: GGCCATCAGCAGGCACAGTCCCGGGCCGACGCCCCAGCCCGACTGTAGCCTCAGGACCGGCCAGAGGAGCGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp ATGGGTGGCTGGCGGCAGGCCTTGGTCAAGGAGCACTaGGAGGCCTGCAGGACCCACGTGCCGGCAGCGGGC +
Preference number: 6 (lower is better)
Translates to: MGGWRQALVKEH*EACRTHVPAAG
Trigger: GCCCGCTGCCGGCACGTGGGTCCTGCAGGCCTCCCAGTGCTCCTTGACCAAGGCCTGCCGCCAGCCACCCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp GGCGAACAGGGCACCCGCAGCAGGACCATGAGCCCGTaGCCGCAGGGGCACTGCTTCGGGGAGTTGAGGAGG +
Preference number: 6 (lower is better)
Translates to: GEQGTRSRTMSP*PQGHCFGELRR
Trigger: CCTCCTCAACTCCCCGAAGCAGTGCCCCTGCGGCCACGGGCTCATGGTCCTGCTGCGGGTGCCCTGTTCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS GCA 72 bp ACGCCTGAGCTGGGACTGCCCAGGATGATCTCAAAGTaGTCCTCCAGCGCCAGCCGGGCCCGCACGTGGGCC +
Preference number: 6 (lower is better)
Translates to: TPELGLPRMISK*SSSASRARTWA
Trigger: GGCCCACGTGCGGGCCCGGCTGGCGCTGGAGGAGCACTTTGAGATCATCCTGGGCAGTCCCAGCTCAGGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS GCA 72 bp TGGTCAAGGAGCACTGGGAGGCCTGCAGGACCCACGTaGCGGCAGCGGGCGCCACGGATGAGGAGGATGAGC +
Preference number: 6 (lower is better)
Translates to: WSRSTGRPAGPT*RQRAPRMRRMS
Trigger: GCTCATCCTCCTCATCCGTGGCGCCCGCTGCCGGCACGTGGGTCCTGCAGGCCTCCCAGTGCTCCTTGACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp GAGCACGACGAGGTGACCGACACCTGGACGCTCCTCTaGCCGGTCCTGAGGCTACAGTCGGGCTGGGGCGTC +
Preference number: 6 (lower is better)
Translates to: EHDEVTDTWTLL*PVLRLQSGWGV
Trigger: GACGCCCCAGCCCGACTGTAGCCTCAGGACCGGCCAGAGGAGCGTCCAGGTGTCGGTCACCTCGTCGTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp GCACGTGGCAGCGGGAGAAGGGCTCTTGCACCTCGCTaGCCCGGGTCTTGCTGGACCACTTCCGCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: ARGSGRRALAPR*PGSCWTTSAGP
Trigger: TGGGCCTGCGGAAGTGGTCCAGCAAGACCCGGGCCAGCGAGGTGCAAGAGCCCTTCTCCCGCTGCCACGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS GCA 72 bp GGCGGCGCCTGCTGGTACTGCCGGATCTCGGTCAGGTaGGACTCGCGCCAAGAGCGCAGGAAGATCTGCTCC +
Preference number: 6 (lower is better)
Translates to: GGACWYCRISVR*DSRQERRKICS
Trigger: GGAGCAGATCTTCCTGCGCTCTTGGCGCGAGTCGCACCTGACCGAGATCCGGCAGTACCAGCAGGCGCCGCC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS GCA 72 bp GGGAGAAGGGCTCTTGCACCTCGCTGGCCCGGGTCTTaGTGGACCACTTCCGCAGGCCCAGCAGGGCGTAGT +
Preference number: 6 (lower is better)
Translates to: GRRALAPRWPGS*WTTSAGPAGRS
Trigger: ACTACGCCCTGCTGGGCCTGCGGAAGTGGTCCAGCAAGACCCGGGCCAGCGAGGTGCAAGAGCCCTTCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS TCA 72 bp CGGAGAGGCCCTCGGCCAGGGAGTAAGCACACTCGATaGCGTGCACGCTGTCGTTGCAGGAGCTGGCGGCCA +
Preference number: 6 (lower is better)
Translates to: RRGPRPGSKHTR*RARCRCRSWRP
Trigger: TGGCCGCCAGCTCCTGCAACGACAGCGTGCACGTCATCGAGTGTGCTTACTCCCTGGCCGAGGGCCTCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS TCA 72 bp AGTGTGCAGGGGCTCCCGCCTCCTGGGCTGCGCCTTTaGTCTGTGCCTGGGGATGGAAGAGGATGCGTGGGG +
Preference number: 6 (lower is better)
Translates to: SVQGLPPPGLRL*SVPGDGRGCVG
Trigger: CCCCACGCATCCTCTTCCATCCCCAGGCACAGATCAAAGGCGCAGCCCAGGAGGCGGGAGCCCCTGCACACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS GCA 72 bp CGCAGCAGGACCATGAGCCCGTGGCCGCAGGGGCACTaGTTCGGGGAGTTGAGGAGGTTCTGCGTGATCTCC +
Preference number: 6 (lower is better)
Translates to: RSRTMSPWPQGH*FGELRRFCVIS
Trigger: GGAGATCACGCAGAACCTCCTCAACTCCCCGAAGCAGTGCCCCTGCGGCCACGGGCTCATGGTCCTGCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS GCA 72 bp GCATTGGCGGTCTGGAACTCATCGCGCAGCCGGAACTaGCACTCGTCCTCGAGCTCCAGGCGGACGACCGTC +
Preference number: 6 (lower is better)
Translates to: ALAVWNSSRSRN*HSSSSSRRTTV
Trigger: GACGGTCGTCCGCCTGGAGCTCGAGGACGAGTGGCAGTTCCGGCTGCGCGATGAGTTCCAGACCGCCAATGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS GCA 72 bp GGGGATGGAAGAGGATGCGTGGGGCGCGTAATGCCCTaGTGTGCAGAGCCTGGCTCGGGTCTGCCTGACACC +
Preference number: 6 (lower is better)
Translates to: GDGRGCVGRVMP*CAEPGSGLPDT
Trigger: GGTGTCAGGCAGACCCGAGCCAGGCTCTGCACAGCAGGGCATTACGCGCCCCACGCATCCTCTTCCATCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS CCA 72 bp GAGGACAGCTGGGAGCACGACGAGGTGACCGACACCTaGACGCTCCTCTGGCCGGTCCTGAGGCTACAGTCG +
Preference number: 6 (lower is better)
Translates to: EDSWEHDEVTDT*TLLWPVLRLQS
Trigger: CGACTGTAGCCTCAGGACCGGCCAGAGGAGCGTCCAGGTGTCGGTCACCTCGTCGTGCTCCCAGCTGTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp AGAAGGGCTCTTGCACCTCGCTGGCCCGGGTCTTGCTaGACCACTTCCGCAGGCCCAGCAGGGCGTAGTGCA +
Preference number: 6 (lower is better)
Translates to: RRALAPRWPGSC*TTSAGPAGRSA
Trigger: TGCACTACGCCCTGCTGGGCCTGCGGAAGTGGTCCAGCAAGACCCGGGCCAGCGAGGTGCAAGAGCCCTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp GCTCCCGCCTCCTGGGCTGCGCCTTTGATCTGTGCCTaGGGATGGAAGAGGATGCGTGGGGCGCGTAATGCC +
Preference number: 6 (lower is better)
Translates to: APASWAAPLICA*GWKRMRGARNA
Trigger: GGCATTACGCGCCCCACGCATCCTCTTCCATCCCCAGGCACAGATCAAAGGCGCAGCCCAGGAGGCGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS CAA 90 bp CTGTGGCCGCCCACCACGATCTGCTTCTTCATCACGCTGAAGCGGTaGAACCGGCAGAGCAGGAGGCCGGCGCTGTGCACCCGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: LWPPTTICFFITLKR*NRQSRRPALCTRRL
Trigger: CAACCTGCGGGTGCACAGCGCCGGCCTCCTGCTCTGCCGGTTCAACCGCTTCAGCGTGATGAAGAAGCAGATCGTGGTGGGCGGCCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS TCA 72 bp GGGTTCTCTGGGGGTGAGGGCACTGAAGGAGATAGGTaGGCTGCGCCAGGTCCCTCGAGTGCCCTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: GFSGGEGTEGDR*AAPGPSSALSW
Trigger: CCAGGACAGGGCACTCGAGGGACCTGGCGCAGCTCACCTATCTCCTTCAGTGCCCTCACCCCCAGAGAACCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432985.1
CDS GCA 72 bp TCGTCCCAGGAACGGGCTCGCTGGGGAAGGCAGCCGTaGTCTCCAGGGCTGGGAAGAGGGAACTGGAACAAG +
Preference number: 6 (lower is better)
Translates to: SSQERARWGRQP*SPGLGRGNWNK
Trigger: CTTGTTCCAGTTCCCTCTTCCCAGCCCTGGAGAGCACGGCTGCCTTCCCCAGCGAGCCCGTTCCTGGGACGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS GCA 72 bp GTCAGGTGCGACTCGCGCCAAGAGCGCAGGAAGATCTaGTCCAGGTCCTCCATCAAGGGCACCTGGTCCGCG +
Preference number: 6 (lower is better)
Translates to: VRCDSRQERRKI*SRSSIKGTWSA
Trigger: CGCGGACCAGGTGCCCTTGATGGAGGACCTGGAGCAGATCTTCCTGCGCTCTTGGCGCGAGTCGCACCTGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS GCA 72 bp CTGCAGGAACTTCTCCAGCAGGAGCTGGGCGGGCGCTaGGAGGAACGTGTGCTTGCTGTCCGGGGCACAGAT +
Preference number: 6 (lower is better)
Translates to: LQELLQQELGGR*EERVLAVRGTD
Trigger: ATCTGTGCCCCGGACAGCAAGCACACGTTCCTCGCAGCGCCCGCCCAGCTCCTGCTGGAGAAGTTCCTGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp AAGCTGGTCCTGCCTGCTGAGCTCCCATCAGGATGCTaGGGTTCGTCCCAGGAACGGGCTCGCTGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: KLVLPAELPSGC*GSSQERARWGR
Trigger: CCTTCCCCAGCGAGCCCGTTCCTGGGACGAACCCCAGCATCCTGATGGGAGCTCAGCAGGCAGGACCAGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CCA 72 bp TGGCTGTGGTGCTGCAGGAACTTCTCCAGCAGGAGCTaGGCGGGCGCTGCGAGGAACGTGTGCTTGCTGTCC +
Preference number: 6 (lower is better)
Translates to: WLWCCRNFSSRS*AGAARNVCLLS
Trigger: GGACAGCAAGCACACGTTCCTCGCAGCGCCCGCCCAGCTCCTGCTGGAGAAGTTCCTGCAGCACCACAGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CAA 72 bp ATGAGCCCGTGGCCGCAGGGGCACTGCTTCGGGGAGTaGAGGAGGTTCTGCGTGATCTCCAGCGTCTCCACC +
Preference number: 6 (lower is better)
Translates to: MSPWPQGHCFGE*RRFCVISSVST
Trigger: GGTGGAGACGCTGGAGATCACGCAGAACCTCCTCAACTCCCCGAAGCAGTGCCCCTGCGGCCACGGGCTCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS CAA 72 bp AAGTGTGCAGGGGCTCCCGCCTCCTGGGCTGCGCCTTaGATCTGTGCCTGGGGATGGAAGAGGATGCGTGGG +
Preference number: 6 (lower is better)
Translates to: KCAGAPASWAAP*ICAWGWKRMRG
Trigger: CCCACGCATCCTCTTCCATCCCCAGGCACAGATCAAAGGCGCAGCCCAGGAGGCGGGAGCCCCTGCACACTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS CAA 72 bp GCGCCAGGTCCCTCGAGTGCCCTGTCCTGGGAAGCCTaGCTCATTGAGTGCACCTGCTCACCCTCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: APGPSSALSWEA*LIECTCSPSWS
Trigger: GCTCCAGGAGGGTGAGCAGGTGCACTCAATGAGCAAGGCTTCCCAGGACAGGGCACTCGAGGGACCTGGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432985.1
CDS CAA 90 bp TACACGAGCTTGGGCAAGAAGACAATGGGTGGCTGGCGGCAGGCCTaGGTCAAGGAGCACTGGGAGGCCTGCAGGACCCACGTGCCGGCA +
Preference number: 6 (lower is better)
Translates to: YTSLGKKTMGGWRQA*VKEHWEACRTHVPA
Trigger: TGCCGGCACGTGGGTCCTGCAGGCCTCCCAGTGCTCCTTGACCAAGGCCTGCCGCCAGCCACCCATTGTCTTCTTGCCCAAGCTCGTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS TCA 72 bp GGGCGGCCGCGTAGTGCTGCACGAGAACAAAGGTCCTaGTCACCGCGCTGTGCAGGCGGGGGAACCTTTTTC +
Preference number: 6 (lower is better)
Translates to: GRPRSAAREQRS*SPRCAGGGTFF
Trigger: GAAAAAGGTTCCCCCGCCTGCACAGCGCGGTGATCAGGACCTTTGTTCTCGTGCAGCACTACGCGGCCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS CCA 72 bp GCCTGGGCCCAGACCCACGGACTCAGGAGGCACCTGTaGTCCTGGCCTGACTCTCATGGAAGCCACATCAGA +
Preference number: 6 (lower is better)
Translates to: AWAQTHGLRRHL*SWPDSHGSHIR
Trigger: TCTGATGTGGCTTCCATGAGAGTCAGGCCAGGACCACAGGTGCCTCCTGAGTCCGTGGGTCTGGGCCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS CCA 72 bp CTGCCTGGCCAGGAGCTGGCAGAGGCTCACCGTCTGTaGTACAGCATCCTTCAGGCAGAGGGTGCAGCTGGA +
Preference number: 6 (lower is better)
Translates to: LPGQELAEAHRL*YSILQAEGAAG
Trigger: TCCAGCTGCACCCTCTGCCTGAAGGATGCTGTACCACAGACGGTGAGCCTCTGCCAGCTCCTGGCCAGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470980.1
CDS CCA 72 bp ACAGAGGCCTGCCTTAGCATCCCAGGATGGTGTCTCTaGAGCTCCTGTTTCAGGAGGGCAGGCCGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: TEACLSIPGWCL*SSCFRRAGRAS
Trigger: GCTGGCCCGGCCTGCCCTCCTGAAACAGGAGCTCCAGAGACACCATCCTGGGATGCTAAGGCAGGCCTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470980.1
CDS CAA 72 bp CCCACCACGATCTGCTTCTTCATCACGCTGAAGCGGTaGAACCGGCAGAGCAGGAGGCCGGCGCTGTGCACC +
Preference number: 6 (lower is better)
Translates to: PTTICFFITLKR*NRQSRRPALCT
Trigger: GGTGCACAGCGCCGGCCTCCTGCTCTGCCGGTTCAACCGCTTCAGCGTGATGAAGAAGCAGATCGTGGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CAA 90 bp AGCAGCCGCCACCTGTCACTCCTCCAGCACCACCAATGGGACACCTaGTGGGCAGAGCACCTTCCAGAGCTTCACTGGGTGCTGCCTGCC +
Preference number: 6 (lower is better)
Translates to: SSRHLSLLQHHQWDT*WAEHLPELHWVLPA
Trigger: GGCAGGCAGCACCCAGTGAAGCTCTGGAAGGTGCTCTGCCCACAAGGTGTCCCATTGGTGGTGCTGGAGGAGTGACAGGTGGCGGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432985.1
CDS TCA 72 bp GGCAGAGCAGGAGGCCGGCGCTGTGCACCCGCAGGTTaGAGTCTACATCGTCACACAGGAACCGGTTCTGGT +
Preference number: 6 (lower is better)
Translates to: GRAGGRRCAPAG*SLHRHTGTGSG
Trigger: ACCAGAACCGGTTCCTGTGTGACGATGTAGACTTCAACCTGCGGGTGCACAGCGCCGGCCTCCTGCTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS GCA 72 bp ATGAAGTTGTGCACGTGGCAGCGGGAGAAGGGCTCTTaGACCTCGCTGGCCCGGGTCTTGCTGGACCACTTC +
Preference number: 6 (lower is better)
Translates to: MKLCTWQREKGS*TSLARVLLDHF
Trigger: GAAGTGGTCCAGCAAGACCCGGGCCAGCGAGGTGCAAGAGCCCTTCTCCCGCTGCCACGTGCACAACTTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS GCA 72 bp AAGCGGTTGAACCGGCAGAGCAGGAGGCCGGCGCTGTaGACCCGCAGGTTGAAGTCTACATCGTCACACAGG +
Preference number: 6 (lower is better)
Translates to: KRLNRQSRRPAL*TRRLKSTSSHR
Trigger: CCTGTGTGACGATGTAGACTTCAACCTGCGGGTGCACAGCGCCGGCCTCCTGCTCTGCCGGTTCAACCGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS GCA 72 bp AGGTGGAAAGTGTGCAGGGGCTCCCGCCTCCTGGGCTaGGCCTTTGATCTGTGCCTGGGGATGGAAGAGGAT +
Preference number: 6 (lower is better)
Translates to: RWKVCRGSRLLG*AFDLCLGMEED
Trigger: ATCCTCTTCCATCCCCAGGCACAGATCAAAGGCGCAGCCCAGGAGGCGGGAGCCCCTGCACACTTTCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS GCA 72 bp CCTTGTGGGCAGAGCACCTTCCAGAGCTTCACTGGGTaGTGCCTGCCAGGTCTTGCCTCCCTGACTCCAAGC +
Preference number: 6 (lower is better)
Translates to: PCGQSTFQSFTG*CLPGLASLTPS
Trigger: GCTTGGAGTCAGGGAGGCAAGACCTGGCAGGCAGCACCCAGTGAAGCTCTGGAAGGTGCTCTGCCCACAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432985.1
CDS CCA 72 bp CGAGGAGAAAGCCCGCAGGGACATCCATGGGCTCGTTaGAAATGGAGACAAGGCGCAGGTCCTTCCCGGCCT +
Preference number: 6 (lower is better)
Translates to: RGESPQGHPWAR*KWRQGAGPSRP
Trigger: AGGCCGGGAAGGACCTGCGCCTTGTCTCCATTTCCAACGAGCCCATGGATGTCCCTGCGGGCTTTCTCCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CCA 72 bp TCGTACACGAGCTTGGGCAAGAAGACAATGGGTGGCTaGCGGCAGGCCTTGGTCAAGGAGCACTGGGAGGCC +
Preference number: 6 (lower is better)
Translates to: SYTSLGKKTMGG*RQALVKEHWEA
Trigger: GGCCTCCCAGTGCTCCTTGACCAAGGCCTGCCGCCAGCCACCCATTGTCTTCTTGCCCAAGCTCGTGTACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp AGGAACGTGTGCTTGCTGTCCGGGGCACAGATGTACTaGGCCGGCACGACCGCGGCAGAGTTATCAGACACC +
Preference number: 6 (lower is better)
Translates to: RNVCLLSGAQMY*AGTTAAELSDT
Trigger: GGTGTCTGATAACTCTGCCGCGGTCGTGCCGGCCCAGTACATCTGTGCCCCGGACAGCAAGCACACGTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp GCCCAGACCCACGGACTCAGGAGGCACCTGTGGTCCTaGCCTGACTCTCATGGAAGCCACATCAGACTCCAG +
Preference number: 6 (lower is better)
Translates to: AQTHGLRRHLWS*PDSHGSHIRLQ
Trigger: CTGGAGTCTGATGTGGCTTCCATGAGAGTCAGGCCAGGACCACAGGTGCCTCCTGAGTCCGTGGGTCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS CAA 72 bp ACGAGGAGAAAGCCCGCAGGGACATCCATGGGCTCGTaGGAAATGGAGACAAGGCGCAGGTCCTTCCCGGCC +
Preference number: 6 (lower is better)
Translates to: TRRKPAGTSMGS*EMETRRRSFPA
Trigger: GGCCGGGAAGGACCTGCGCCTTGTCTCCATTTCCAACGAGCCCATGGATGTCCCTGCGGGCTTTCTCCTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CAA 90 bp TTGACCCCCACGAGGAGAAAGCCCGCAGGGACATCCATGGGCTCGTaGGAAATGGAGACAAGGCGCAGGTCCTTCCCGGCCTGGCAAAAC +
Preference number: 6 (lower is better)
Translates to: LTPTRRKPAGTSMGS*EMETRRRSFPAWQN
Trigger: GTTTTGCCAGGCCGGGAAGGACCTGCGCCTTGTCTCCATTTCCAACGAGCCCATGGATGTCCCTGCGGGCTTTCTCCTCGTGGGGGTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CAA 90 bp CGGTTGAACCGGCAGAGCAGGAGGCCGGCGCTGTGCACCCGCAGGTaGAAGTCTACATCGTCACACAGGAACCGGTTCTGGTTGTACTGC +
Preference number: 6 (lower is better)
Translates to: RLNRQSRRPALCTRR*KSTSSHRNRFWLYC
Trigger: GCAGTACAACCAGAACCGGTTCCTGTGTGACGATGTAGACTTCAACCTGCGGGTGCACAGCGCCGGCCTCCTGCTCTGCCGGTTCAACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS TCA 72 bp CACTGGTTCTCCAGAGGCCACCACTGGAAAGGTGACTaGAGCTGGTCCCACCAAGCCAACCTGCGGCACGCA +
Preference number: 6 (lower is better)
Translates to: HWFSRGHHWKGD*SWSHQANLRHA
Trigger: TGCGTGCCGCAGGTTGGCTTGGTGGGACCAGCTTCAGTCACCTTTCCAGTGGTGGCCTCTGGAGAACCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
CDS TCA 72 bp GCTTCACTGGGTGCTGCCTGCCAGGTCTTGCCTCCCTaGCTCCAAGCAGGGAGGATTCTGCCCTGCATTCTC +
Preference number: 6 (lower is better)
Translates to: ASLGAACQVLPP*LQAGRILPCIL
Trigger: GAGAATGCAGGGCAGAATCCTCCCTGCTTGGAGTCAGGGAGGCAAGACCTGGCAGGCAGCACCCAGTGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432985.1
CDS GCA 72 bp TCCTCGGAGATGGGCTGGATGGCAGAGGCGCCGTACTaGTCGTATGCCCGTGAGACAGACTGGGAATTCTGG +
Preference number: 6 (lower is better)
Translates to: SSEMGWMAEAPY*SYARETDWEFW
Trigger: CCAGAATTCCCAGTCTGTCTCACGGGCATACGAGCAGTACGGCGCCTCTGCCATCCAGCCCATCTCCGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234142.9
ENST00000381483.6
ENST00000381486.7
ENST00000432985.1
CDS CCA 72 bp GAAAGCCCGCAGGGACATCCATGGGCTCGTTGGAAATaGAGACAAGGCGCAGGTCCTTCCCGGCCTGGCAAA +
Preference number: 6 (lower is better)
Translates to: ESPQGHPWARWK*RQGAGPSRPGK
Trigger: TTTGCCAGGCCGGGAAGGACCTGCGCCTTGTCTCCATTTCCAACGAGCCCATGGATGTCCCTGCGGGCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CCA 72 bp CTGCGCTACTGCCAGCTGGAAGGGCCGGATGCTGTGTaGCTCCAGATTGTAACTTGTGCACACCGGTGTCCC +
Preference number: 6 (lower is better)
Translates to: LRYCQLEGPDAV*LQIVTCAHRCP
Trigger: GGGACACCGGTGTGCACAAGTTACAATCTGGAGCCACACAGCATCCGGCCCTTCCAGCTGGCAGTAGCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS CAA 90 bp GGCAGGCCACTGCTGTCAGTGGACACAACCATGTCGTACACGAGCTaGGGCAAGAAGACAATGGGTGGCTGGCGGCAGGCCTTGGTCAAG +
Preference number: 6 (lower is better)
Translates to: GRPLLSVDTTMSYTS*GKKTMGGWRQALVK
Trigger: CTTGACCAAGGCCTGCCGCCAGCCACCCATTGTCTTCTTGCCCAAGCTCGTGTACGACATGGTTGTGTCCACTGACAGCAGTGGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS TCA 72 bp TCACAATGTTGGGGGCCTCCTTCACCTCCCTGCAGTTaGGCAATCGGTCCACCAATCCCACCGACGGGTCAC +
Preference number: 6 (lower is better)
Translates to: SQCWGPPSPPCS*AIGPPIPPTGH
Trigger: GTGACCCGTCGGTGGGATTGGTGGACCGATTGCTCAACTGCAGGGAGGTGAAGGAGGCCCCCAACATTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS GCA 72 bp AATGGAACACACATGGGAGAGGAGCTTCTGCGCTACTaGCAGCTGGAAGGGCCGGATGCTGTGTGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: NGTHMGEELLRY*QLEGPDAVWLQ
Trigger: CTGGAGCCACACAGCATCCGGCCCTTCCAGCTGGCAGTAGCGCAGAAGCTCCTCTCCCATGTGTGTTCCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS GCA 72 bp GTGATGTGGAAGGACCTGTGGCCGCCCACCACGATCTaGTTCTTCATCACGCTGAAGCGGTTGAACCGGCAG +
Preference number: 6 (lower is better)
Translates to: VMWKDLWPPTTI*FFITLKRLNRQ
Trigger: CTGCCGGTTCAACCGCTTCAGCGTGATGAAGAAGCAGATCGTGGTGGGCGGCCACAGGTCCTTCCACATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp AAGAGTGGCACAGAGGCCTGCCTTAGCATCCCAGGATaGTGTCTCTGGAGCTCCTGTTTCAGGAGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: KSGTEACLSIPG*CLWSSCFRRAG
Trigger: GCCTGCCCTCCTGAAACAGGAGCTCCAGAGACACCATCCTGGGATGCTAAGGCAGGCCTCTGTGCCACTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470980.1
CDS CAA 72 bp GTCACAATGTTGGGGGCCTCCTTCACCTCCCTGCAGTaGAGCAATCGGTCCACCAATCCCACCGACGGGTCA +
Preference number: 6 (lower is better)
Translates to: VTMLGASFTSLQ*SNRSTNPTDGS
Trigger: TGACCCGTCGGTGGGATTGGTGGACCGATTGCTCAACTGCAGGGAGGTGAAGGAGGCCCCCAACATTGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS CAA 72 bp CTGCTGTCAGTGGACACAACCATGTCGTACACGAGCTaGGGCAAGAAGACAATGGGTGGCTGGCGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: LLSVDTTMSYTS*GKKTMGGWRQA
Trigger: GGCCTGCCGCCAGCCACCCATTGTCTTCTTGCCCAAGCTCGTGTACGACATGGTTGTGTCCACTGACAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CAA 72 bp CACCTGTCACTCCTCCAGCACCACCAATGGGACACCTaGTGGGCAGAGCACCTTCCAGAGCTTCACTGGGTG +
Preference number: 6 (lower is better)
Translates to: HLSLLQHHQWDT*WAEHLPELHWV
Trigger: CACCCAGTGAAGCTCTGGAAGGTGCTCTGCCCACAAGGTGTCCCATTGGTGGTGCTGGAGGAGTGACAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432985.1
CDS CAA 90 bp GGCCTGGGCACCAGGTTGTTGGACCGCAGGGATGCCTCGATGGAATaGTGCAAGACCTCTTCAAAGCGTGTCGTCTTCAGCTGTCCAGCG +
Preference number: 6 (lower is better)
Translates to: GLGTRLLDRRDASME*CKTSSKRVVFSCPA
Trigger: CGCTGGACAGCTGAAGACGACACGCTTTGAAGAGGTCTTGCACAATTCCATCGAGGCATCCCTGCGGTCCAACAACCTGGTGCCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000470980.1
ENST00000628795.2
CDS TCA 72 bp GAGCTGCTTTACGAAGTGCTTCCCCACGGTGACGCCTaGGCTGGGACTGCCCAGGATGATCTCAAAGTGCTC +
Preference number: 6 (lower is better)
Translates to: ELLYEVLPHGDA*AGTAQDDLKVL
Trigger: GAGCACTTTGAGATCATCCTGGGCAGTCCCAGCTCAGGCGTCACCGTGGGGAAGCACTTCGTAAAGCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS GCA 72 bp GGAAAGGTGACTGAAGCTGGTCCCACCAAGCCAACCTaGGGCACGCAGGACATGCCTGCGCTCTCATACTTA +
Preference number: 6 (lower is better)
Translates to: GKVTEAGPTKPT*GTQDMPALSYL
Trigger: TAAGTATGAGAGCGCAGGCATGTCCTGCGTGCCGCAGGTTGGCTTGGTGGGACCAGCTTCAGTCACCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
CDS GCA 72 bp TTCTGGGTCAGGTCCACGTTCAGGATGATGAAGTTGTaGACGTGGCAGCGGGAGAAGGGCTCTTGCACCTCG +
Preference number: 6 (lower is better)
Translates to: FWVRSTFRMMKL*TWQREKGSCTS
Trigger: CGAGGTGCAAGAGCCCTTCTCCCGCTGCCACGTGCACAACTTCATCATCCTGAACGTGGACCTGACCCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS GCA 72 bp CAGGTTCCCACAGAGGTAAGGGAAGTTCCCATGGCCTaGAGAGGAACAGCAGCGACTTGGCACCCAGTCTTG +
Preference number: 6 (lower is better)
Translates to: QVPTEVREVPMA*RGTAATWHPVL
Trigger: CAAGACTGGGTGCCAAGTCGCTGCTGTTCCTCTGCAGGCCATGGGAACTTCCCTTACCTCTGTGGGAACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432985.1
CDS CAA 72 bp TCAGAGATCACAATGAAAGGCCAGATGTCCTGCGGCTaGATTCCCAGCTCCTCCTGCCGGTTCCGCTCGAGC +
Preference number: 6 (lower is better)
Translates to: SEITMKGQMSCG*IPSSSCRFRSS
Trigger: GCTCGAGCGGAACCGGCAGGAGGAGCTGGGAATCAAGCCGCAGGACATCTGGCCTTTCATTGTGATCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CAA 72 bp ACGTTCTGGGTCAGGTCCACGTTCAGGATGATGAAGTaGTGCACGTGGCAGCGGGAGAAGGGCTCTTGCACC +
Preference number: 6 (lower is better)
Translates to: TFWVRSTFRMMK*CTWQREKGSCT
Trigger: GGTGCAAGAGCCCTTCTCCCGCTGCCACGTGCACAACTTCATCATCCTGAACGTGGACCTGACCCAGAACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CAA 72 bp GGAAGTTCCCATGGCCTGCAGAGGAACAGCAGCGACTaGGCACCCAGTCTTGTGCACAGCTTACGGTCCCAT +
Preference number: 6 (lower is better)
Translates to: GSSHGLQRNSSD*APSLVHSLRSH
Trigger: ATGGGACCGTAAGCTGTGCACAAGACTGGGTGCCAAGTCGCTGCTGTTCCTCTGCAGGCCATGGGAACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432985.1
CDS CAA 90 bp AGAGGTAAGGGAAGTTCCCATGGCCTGCAGAGGAACAGCAGCGACTaGGCACCCAGTCTTGTGCACAGCTTACGGTCCCATACATGTGGG +
Preference number: 6 (lower is better)
Translates to: RGKGSSHGLQRNSSD*APSLVHSLRSHTCG
Trigger: CCCACATGTATGGGACCGTAAGCTGTGCACAAGACTGGGTGCCAAGTCGCTGCTGTTCCTCTGCAGGCCATGGGAACTTCCCTTACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432985.1
CDS TCA 72 bp TCGGTGCAAAAGCCTGGCTCCACGCAAGGTAGAAGGTaGAACAGCTGCAAGGAGGAAGGGCCGTGTAGCCTT +
Preference number: 6 (lower is better)
Translates to: SVQKPGSTQGRR*NSCKEEGPCSL
Trigger: AAGGCTACACGGCCCTTCCTCCTTGCAGCTGTTTCACCTTCTACCTTGCGTGGAGCCAGGCTTTTGCACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000628795.2
CDS TCA 72 bp CTGGATGGCAGAGGCGCCGTACTGCTCGTATGCCCGTaGGACAGACTGGGAATTCTGGTAGCACGTGTACAA +
Preference number: 6 (lower is better)
Translates to: LDGRGAVLLVCP*DRLGILVARVQ
Trigger: TTGTACACGTGCTACCAGAATTCCCAGTCTGTCTCACGGGCATACGAGCAGTACGGCGCCTCTGCCATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234142.9
ENST00000381483.6
ENST00000381486.7
ENST00000432985.1
CDS TCA 72 bp TGCTGTGTCTGCAGTGCATACGGGAAGGAGGTCACGTaGAGTGTCACAATGTTGGGGGCCTCCTTCACCTCC +
Preference number: 6 (lower is better)
Translates to: CCVCSAYGKEVT*SVTMLGASFTS
Trigger: GGAGGTGAAGGAGGCCCCCAACATTGTGACACTTCACGTGACCTCCTTCCCGTATGCACTGCAGACACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS GCA 72 bp TGCTGCACGAGAACAAAGGTCCTGATCACCGCGCTGTaGAGGCGGGGGAACCTTTTTCCTAATGCAGTGACC +
Preference number: 6 (lower is better)
Translates to: CCTRTKVLITAL*RRGNLFPNAVT
Trigger: GGTCACTGCATTAGGAAAAAGGTTCCCCCGCCTGCACAGCGCGGTGATCAGGACCTTTGTTCTCGTGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS GCA 72 bp TCAATTTTCTGCCACATCCTGAGCTGCTTTACGAAGTaGTTCCCCACGGTGACGCCTGAGCTGGGACTGCCC +
Preference number: 6 (lower is better)
Translates to: SIFCHILSCFTK*FPTVTPELGLP
Trigger: GGGCAGTCCCAGCTCAGGCGTCACCGTGGGGAAGCACTTCGTAAAGCAGCTCAGGATGTGGCAGAAAATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234142.9
ENST00000381486.7
CDS GCA 72 bp AGCCTTCTGTCCCCAGCTCCTCATCCTCGTTGTCTGTaGTGCTCAGCTTCTCAGCATCACTCTCCAAGGCCT +
Preference number: 6 (lower is better)
Translates to: SLLSPAPHPRCL*CSASQHHSPRP
Trigger: AGGCCTTGGAGAGTGATGCTGAGAAGCTGAGCAGCACAGACAACGAGGATGAGGAGCTGGGGACAGAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
ENST00000472040.1
CDS GCA 72 bp AGTGTTGTACGCTGCGTACTTGGACAGTCTCATCCGTaGCGTCTGACGCCGCACATAAAGGTCCTCCGGCTT +
Preference number: 6 (lower is better)
Translates to: SVVRCVLGQSHP*RLTPHIKVLRL
Trigger: AAGCCGGAGGACCTTTATGTGCGGCGTCAGACGGCACGGATGAGACTGTCCAAGTACGCAGCGTACAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp GCTCACAGTGGTGGTAAGTGTTGTACGCTGCGTACTTaGACAGTCTCATCCGTGCCGTCTGACGCCGCACAT +
Preference number: 6 (lower is better)
Translates to: AHSGGKCCTLRT*TVSSVPSDAAH
Trigger: ATGTGCGGCGTCAGACGGCACGGATGAGACTGTCCAAGTACGCAGCGTACAACACTTACCACCACTGTGAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CAA 72 bp TACAGCTGGGAAAAGATGGGCCTGGGCACCAGGTTGTaGGACCGCAGGGATGCCTCGATGGAATTGTGCAAG +
Preference number: 6 (lower is better)
Translates to: YSWEKMGLGTRL*DRRDASMELCK
Trigger: CTTGCACAATTCCATCGAGGCATCCCTGCGGTCCAACAACCTGGTGCCCAGGCCCATCTTTTCCCAGCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000470980.1
ENST00000628795.2
CDS CAA 72 bp AGAGCATTGTGGCCATTGTCATCTGGCAAGAACCTCTaGTCAACGGCGCACACCAGGAGATGGTCCGGCAGG +
Preference number: 6 (lower is better)
Translates to: RALWPLSSGKNL*STAHTRRWSGR
Trigger: CCTGCCGGACCATCTCCTGGTGTGCGCCGTTGACAAGAGGTTCTTGCCAGATGACAATGGCCACAATGCTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CAA 90 bp AGCCGATGGTCGCGGCAGGGCCAACAGGTTATTCTTTGCCAGTTGTaGGCACTTCGGGGAATCTTTGCCGTTGAAAACAGCCGGACCCAT +
Preference number: 6 (lower is better)
Translates to: SRWSRQGQQVILCQL*ALRGIFAVENSRTH
Trigger: ATGGGTCCGGCTGTTTTCAACGGCAAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAATAACCTGTTGGCCCTGCCGCGACCATCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS GCA 72 bp AGCCGATGGTCGCGGCAGGGCCAACAGGTTATTCTTTaGCAGTTGTTGGCACTTCGGGGAATCTTTGCCGTT +
Preference number: 6 (lower is better)
Translates to: SRWSRQGQQVIL*QLLALRGIFAV
Trigger: AACGGCAAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAATAACCTGTTGGCCCTGCCGCGACCATCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CCA 72 bp TGGGCACCAGGTTGTTGGACCGCAGGGATGCCTCGATaGAATTGTGCAAGACCTCTTCAAAGCGTGTCGTCT +
Preference number: 6 (lower is better)
Translates to: WAPGCWTAGMPR*NCARPLQSVSS
Trigger: AGACGACACGCTTTGAAGAGGTCTTGCACAATTCCATCGAGGCATCCCTGCGGTCCAACAACCTGGTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000470980.1
ENST00000628795.2
CDS CAA 72 bp AAGCCGATGGTCGCGGCAGGGCCAACAGGTTATTCTTaGCCAGTTGTTGGCACTTCGGGGAATCTTTGCCGT +
Preference number: 6 (lower is better)
Translates to: KPMVAAGPTGYS*PVVGTSGNLCR
Trigger: ACGGCAAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAATAACCTGTTGGCCCTGCCGCGACCATCGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS TCA 72 bp ACTGGGAATTCTGGTAGCACGTGTACAAGAGGGGGCTaGCCACGACGTCATTCAGGTTCCCACAGAGGTAAG +
Preference number: 6 (lower is better)
Translates to: TGNSGSTCTRGG*PRRHSGSHRGK
Trigger: CTTACCTCTGTGGGAACCTGAATGACGTCGTGGTCAGCCCCCTCTTGTACACGTGCTACCAGAATTCCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000234142.9
ENST00000381483.6
ENST00000381486.7
ENST00000432985.1
CDS TCA 72 bp CGACCGTCTGGCGCAGTGAGCTCCGGTCCTGACAGATaGCACACAACGTCGCACCTTTCAGAAAATGAAACT +
Preference number: 6 (lower is better)
Translates to: RPSGAVSSGPDR*HTTSHLSENET
Trigger: AGTTTCATTTTCTGAAAGGTGCGACGTTGTGTGTCATCTGTCAGGACCGGAGCTCACTGCGCCAGACGGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp CGCGGCAGGGCCAACAGGTTATTCTTTGCCAGTTGTTaGCACTTCGGGGAATCTTTGCCGTTGAAAACAGCC +
Preference number: 6 (lower is better)
Translates to: RGRANRLFFASC*HFGESLPLKTA
Trigger: GGCTGTTTTCAACGGCAAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAATAACCTGTTGGCCCTGCCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CCA 72 bp ATCCCAGGTCCAGATTTTGGGTGCTGGAATCCGCAATaGAACACACATGGGAGAGGAGCTTCTGCGCTACTG +
Preference number: 6 (lower is better)
Translates to: IPGPDFGCWNPQ*NTHGRGASALL
Trigger: CAGTAGCGCAGAAGCTCCTCTCCCATGTGTGTTCCATTGCGGATTCCAGCACCCAAAATCTGGACCTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS CCA 72 bp TTATCAGACACCTTGGATGTGATGTGGAAGGACCTGTaGCCGCCCACCACGATCTGCTTCTTCATCACGCTG +
Preference number: 6 (lower is better)
Translates to: LSDTLDVMWKDL*PPTTICFFITL
Trigger: CAGCGTGATGAAGAAGCAGATCGTGGTGGGCGGCCACAGGTCCTTCCACATCACATCCAAGGTGTCTGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp AGATCCCAGGTTCAGGTAACAGTCGACAGACAGCACTaGGTGGTCATGGTTCTTCAGGGACAGCGGGAAGAA +
Preference number: 6 (lower is better)
Translates to: RSQVQVTVDRQH*VVMVLQGQREE
Trigger: TTCTTCCCGCTGTCCCTGAAGAACCATGACCACCCAGTGCTGTCTGTCGACTGTTACCTGAACCTGGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp CTGATGCAGAAGTGGGGCCTGATTCTGATTCCAGGATaGGTCCATGAATTCACGCCTCTCATAAGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: LMQKWGLILIPG*VHEFTPLISSG
Trigger: CCCGGAGCTTATGAGAGGCGTGAATTCATGGACCCATCCTGGAATCAGAATCAGGCCCCACTTCTGCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS CAA 72 bp ACCAGGTTGTTGGACCGCAGGGATGCCTCGATGGAATaGTGCAAGACCTCTTCAAAGCGTGTCGTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: TRLLDRRDASME*CKTSSKRVVFS
Trigger: GCTGAAGACGACACGCTTTGAAGAGGTCTTGCACAATTCCATCGAGGCATCCCTGCGGTCCAACAACCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000470980.1
ENST00000628795.2
CDS TCA 72 bp TTGCCAGTTGTTGGCACTTCGGGGAATCTTTGCCGTTaGAAACAGCCGGACCCATTGCTGCGTTTAGTGAGG +
Preference number: 6 (lower is better)
Translates to: LPVVGTSGNLCR*KQPDPLLRLVR
Trigger: CCTCACTAAACGCAGCAATGGGTCCGGCTGTTTTCAACGGCAAAGATTCCCCGAAGTGCCAACAACTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS TCA 72 bp GGAGCTATCGTATCTGAGCAAGGGGAGGCTGTGTCCTaGAAGGGTGGATTCAATAAACTCCGACAGCCCGAA +
Preference number: 6 (lower is better)
Translates to: GAIVSEQGEAVS*KGGFNKLRQPE
Trigger: TTCGGGCTGTCGGAGTTTATTGAATCCACCCTTTCAGGACACAGCCTCCCCTTGCTCAGATACGATAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS GCA 72 bp AGGTTGTTGGACCGCAGGGATGCCTCGATGGAATTGTaGAAGACCTCTTCAAAGCGTGTCGTCTTCAGCTGT +
Preference number: 6 (lower is better)
Translates to: RLLDRRDASMEL*KTSSKRVVFSC
Trigger: ACAGCTGAAGACGACACGCTTTGAAGAGGTCTTGCACAATTCCATCGAGGCATCCCTGCGGTCCAACAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000470980.1
ENST00000628795.2
CDS GCA 72 bp CCACCTTCTCAAAGGATCCCAGGTCCAGATTTTGGGTaGTGGAATCCGCAATGGAACACACATGGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: PPSQRIPGPDFG*WNPQWNTHGRG
Trigger: TCCTCTCCCATGTGTGTTCCATTGCGGATTCCAGCACCCAAAATCTGGACCTGGGATCCTTTGAGAAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS GCA 72 bp TCTACATCGTCACACAGGAACCGGTTCTGGTTGTACTaGACGTTCTGGGTCAGGTCCACGTTCAGGATGATG +
Preference number: 6 (lower is better)
Translates to: STSSHRNRFWLY*TFWVRSTFRMM
Trigger: CATCATCCTGAACGTGGACCTGACCCAGAACGTGCAGTACAACCAGAACCGGTTCCTGTGTGACGATGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp TCACACAGGAACCGGTTCTGGTTGTACTGCACGTTCTaGGTCAGGTCCACGTTCAGGATGATGAAGTTGTGC +
Preference number: 6 (lower is better)
Translates to: SHRNRFWLYCTF*VRSTFRMMKLC
Trigger: GCACAACTTCATCATCCTGAACGTGGACCTGACCCAGAACGTGCAGTACAACCAGAACCGGTTCCTGTGTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CAA 72 bp TCGCGGCAGGGCCAACAGGTTATTCTTTGCCAGTTGTaGGCACTTCGGGGAATCTTTGCCGTTGAAAACAGC +
Preference number: 6 (lower is better)
Translates to: SRQGQQVILCQL*ALRGIFAVENS
Trigger: GCTGTTTTCAACGGCAAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAATAACCTGTTGGCCCTGCCGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CAA 72 bp TGGTCGCGGCAGGGCCAACAGGTTATTCTTTGCCAGTaGTTGGCACTTCGGGGAATCTTTGCCGTTGAAAAC +
Preference number: 6 (lower is better)
Translates to: WSRQGQQVILCQ*LALRGIFAVEN
Trigger: GTTTTCAACGGCAAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAATAACCTGTTGGCCCTGCCGCGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CAA 90 bp GCCAACAGGTTATTCTTTGCCAGTTGTTGGCACTTCGGGGAATCTTaGCCGTTGAAAACAGCCGGACCCATTGCTGCGTTTAGTGAGGGG +
Preference number: 6 (lower is better)
Translates to: ANRLFFASCWHFGES*PLKTAGPIAAFSEG
Trigger: CCCCTCACTAAACGCAGCAATGGGTCCGGCTGTTTTCAACGGCAAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAATAACCTGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CAA 90 bp CCTGCAGTTGAGCAATCGGTCCACCAATCCCACCGACGGGTCACTTaGAGAATAGAGGTTATGAACAGTGCTACTCACAAGATCCCAGTG +
Preference number: 6 (lower is better)
Translates to: PAVEQSVHQSHRRVT*RIEVMNSATHKIPV
Trigger: CACTGGGATCTTGTGAGTAGCACTGTTCATAACCTCTATTCTCAAAGTGACCCGTCGGTGGGATTGGTGGACCGATTGCTCAACTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS GCA 72 bp CTCAGCAGAGACGAAGAAAGGGTGGCTGTCCTCAGCTaGAGCTACTGCCGGGCAATTACAGGAAGTTATATA +
Preference number: 6 (lower is better)
Translates to: LSRDEERVAVLS*SYCRAITGSYI
Trigger: TATATAACTTCCTGTAATTGCCCGGCAGTAGCTGCAGCTGAGGACAGCCACCCTTTCTTCGTCTCTGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234142.9
CDS CCA 72 bp AGAGAAACCAAGAAGAGCATTGTGGCCATTGTCATCTaGCAAGAACCTCTTGTCAACGGCGCACACCAGGAG +
Preference number: 6 (lower is better)
Translates to: RETKKSIVAIVI*QEPLVNGAHQE
Trigger: CTCCTGGTGTGCGCCGTTGACAAGAGGTTCTTGCCAGATGACAATGGCCACAATGCTCTTCTTGGTTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CCA 72 bp AAGTCCACCTTCTCAAAGGATCCCAGGTCCAGATTTTaGGTGCTGGAATCCGCAATGGAACACACATGGGAG +
Preference number: 6 (lower is better)
Translates to: KSTFSKDPRSRF*VLESAMEHTWE
Trigger: CTCCCATGTGTGTTCCATTGCGGATTCCAGCACCCAAAATCTGGACCTGGGATCCTTTGAGAAGGTGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS CCA 72 bp GCCATCTCGTATTCCTTGACAACCAGCACGTGCAAATaGCTGGCACCGTCCATTGCGTGGTACAGATTAAAG +
Preference number: 6 (lower is better)
Translates to: AISYSLTTSTCK*LAPSIAWYRLK
Trigger: CTTTAATCTGTACCACGCAATGGACGGTGCCAGCCATTTGCACGTGCTGGTTGTCAAGGAATACGAGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp TTCCATAGGGCTCCAGGTCTCTGTCCTTCTTCCATTTaGCAGGTCCTCAAGAGCTGCAAGCCTTCCATTGAA +
Preference number: 6 (lower is better)
Translates to: FHRAPGLCPSSI*QVLKSCKPSIE
Trigger: TTCAATGGAAGGCTTGCAGCTCTTGAGGACCTGCCAAATGGAAGAAGGACAGAGACCTGGAGCCCTATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381486.7
CDS CAA 72 bp TTTGCCAGTTGTTGGCACTTCGGGGAATCTTTGCCGTaGAAAACAGCCGGACCCATTGCTGCGTTTAGTGAG +
Preference number: 6 (lower is better)
Translates to: FASCWHFGESLP*KTAGPIAAFSE
Trigger: CTCACTAAACGCAGCAATGGGTCCGGCTGTTTTCAACGGCAAAGATTCCCCGAAGTGCCAACAACTGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CAA 90 bp GCAAATGAGAAAGTCCACCTTCTCAAAGGATCCCAGGTCCAGATTTaGGGTGCTGGAATCCGCAATGGAACACACATGGGAGAGGAGCTT +
Preference number: 6 (lower is better)
Translates to: ANEKVHLLKGSQVQI*GAGIRNGTHMGEEL
Trigger: AAGCTCCTCTCCCATGTGTGTTCCATTGCGGATTCCAGCACCCAAAATCTGGACCTGGGATCCTTTGAGAAGGTGGACTTTCTCATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS TCA 72 bp TCCATTGCGTGGTACAGATTAAAGAGCCCATGTTCGTaGCGGCCGGTGGTTGGAGTGAATGTCGGACTTTTT +
Preference number: 6 (lower is better)
Translates to: SIAWYRLKSPCS*RPVVGVNVGLF
Trigger: AAAAAGTCCGACATTCACTCCAACCACCGGCCGTCACGAACATGGGCTCTTTAATCTGTACCACGCAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS GCA 72 bp TCCGTGTCTAGCTTCAGAACATACTGTTCCACCCTCTaGTTCGTCATGTGCTCTTTCTTCAGACCAAGCTCC +
Preference number: 6 (lower is better)
Translates to: SVSSFRTYCSTL*FVMCSFFRPSS
Trigger: GGAGCTTGGTCTGAAGAAAGAGCACATGACGAAGCAGAGGGTGGAACAGTATGTTCTGAAGCTAGACACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS CCA 72 bp AACAAAGCCAGAGGGGCCAGAGGAGAGCCCTTCCTATaGGCATCAAAGTACAAGATGTGCGCTTTGATTCTT +
Preference number: 6 (lower is better)
Translates to: NKARGARGEPFL*ASKYKMCALIL
Trigger: AAGAATCAAAGCGCACATCTTGTACTTTGATGCCCATAGGAAGGGCTCTCCTCTGGCCCCTCTGGCTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381483.6
ENST00000389825.7
CDS CCA 72 bp TCCACTTGGCCACCGTATTTTCAGTCGGCTAGAACATaGAGATTAGCCAGCCAGAGCATGTCCAAGACATCT +
Preference number: 6 (lower is better)
Translates to: STWPPYFQSART*RLASQSMSKTS
Trigger: AGATGTCTTGGACATGCTCTGGCTGGCTAATCTCCATGTTCTAGCCGACTGAAAATACGGTGGCCAAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396123.2
CDS CCA 72 bp GAGCCTAGGATGAGAGGAGTCACCTTTTCTAACCAATaGGGCTGTGCCACTTGCTGGTTCATTTCGTCCAAT +
Preference number: 6 (lower is better)
Translates to: EPRMRGVTFSNQ*GCATCWFISSN
Trigger: ATTGGACGAAATGAACCAGCAAGTGGCACAGCCCCATTGGTTAGAAAAGGTGACTCCTCTCATCCTAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432985.1
CDS CAA 72 bp CAATTCCCAGAGAAACCAAGAAGAGCATTGTGGCCATaGTCATCTGGCAAGAACCTCTTGTCAACGGCGCAC +
Preference number: 6 (lower is better)
Translates to: QFPEKPRRALWP*SSGKNLLSTAH
Trigger: GTGCGCCGTTGACAAGAGGTTCTTGCCAGATGACAATGGCCACAATGCTCTTCTTGGTTTCTCTGGGAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CAA 72 bp GAGCAATCGGTCCACCAATCCCACCGACGGGTCACTTaGAGAATAGAGGTTATGAACAGTGCTACTCACAAG +
Preference number: 6 (lower is better)
Translates to: EQSVHQSHRRVT*RIEVMNSATHK
Trigger: CTTGTGAGTAGCACTGTTCATAACCTCTATTCTCAAAGTGACCCGTCGGTGGGATTGGTGGACCGATTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS CAA 72 bp AAAAATGAATGTCTGGCTCCCAAGCCACTGGTAAAGTaGAGACTGTCCAAAGAGTGGCACAGAGGCCTGCCT +
Preference number: 6 (lower is better)
Translates to: KNECLAPKPLVK*RLSKEWHRGLP
Trigger: AGGCAGGCCTCTGTGCCACTCTTTGGACAGTCTCAACTTTACCAGTGGCTTGGGAGCCAGACATTCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470980.1
CDS TCA 72 bp CCTTCCTATGGGCATCAAAGTACAAGATGTGCGCTTTaGTTCTTTCTCCATGAACACACTGCTGCTCAGCCG +
Preference number: 6 (lower is better)
Translates to: PSYGHQSTRCAL*FFLHEHTAAQP
Trigger: CGGCTGAGCAGCAGTGTGTTCATGGAGAAAGAATCAAAGCGCACATCTTGTACTTTGATGCCCATAGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389825.7
CDS GCA 72 bp TTCAGAACATACTGTTCCACCCTCTGCTTCGTCATGTaGTCTTTCTTCAGACCAAGCTCCAGCAAAACCCCT +
Preference number: 6 (lower is better)
Translates to: FRTYCSTLCFVM*SFFRPSSSKTP
Trigger: AGGGGTTTTGCTGGAGCTTGGTCTGAAGAAAGAGCACATGACGAAGCAGAGGGTGGAACAGTATGTTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000432985.1
CDS GCA 72 bp TTGTCTGGTTTATACGTCCGGATTTCGTATTTGATGTaGCAGCTGGACCAGGTAGTAGACGGTAAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: LSGLYVRISYLM*QLDQVVDGKQE
Trigger: CTCCTGCTTACCGTCTACTACCTGGTCCAGCTGGCACATCAAATACGAAATCCGGACGTATAAACCAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS CAA 72 bp TTATTCTTTGCCAGTTGTTGGCACTTCGGGGAATCTTaGCCGTTGAAAACAGCCGGACCCATTGCTGCGTTT +
Preference number: 6 (lower is better)
Translates to: LFFASCWHFGES*PLKTAGPIAAF
Trigger: AAACGCAGCAATGGGTCCGGCTGTTTTCAACGGCAAAGATTCCCCGAAGTGCCAACAACTGGCAAAGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
ENST00000389825.7
CDS CAA 72 bp AATATCACTGGCTTGGCCTTGCATATTTTCAGCAAGTaGTCAGGAACAGACACTGGTTCTCCAGAGGCCACC +
Preference number: 6 (lower is better)
Translates to: NITGLALHIFSK*SGTDTGSPEAT
Trigger: GGTGGCCTCTGGAGAACCAGTGTCTGTTCCTGACAACTTGCTGAAAATATGCAAGGCCAAGCCAGTGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234142.9
ENST00000263834.9
ENST00000381483.6
ENST00000381486.7
CDS CAA 90 bp TGGCCTTTAAATATCACTGGCTTGGCCTTGCATATTTTCAGCAAGTaGTCAGGAACAGACACTGGTTCTCCAGAGGCCACCACTGGAAAG +
Preference number: 6 (lower is better)
Translates to: WPLNITGLALHIFSK*SGTDTGSPEATTGK
Trigger: CTTTCCAGTGGTGGCCTCTGGAGAACCAGTGTCTGTTCCTGACAACTTGCTGAAAATATGCAAGGCCAAGCCAGTGATATTTAAAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381483.6
ENST00000381486.7
CDS TCA 72 bp GTAACAGCTTTCTCTAATTTAGCACTCAGCAGAGCCTaGCACCTCTTAGACTGTTTCACTAGGAGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: VTAFSNLALSRA*HLLDCFTRSCL
Trigger: GAGGCAGCTCCTAGTGAAACAGTCTAAGAGGTGTCAGGCTCTGCTGAGTGCTAAATTAGAGAAAGCTGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234142.9
CDS CCA 72 bp CAGATTAAAGAGCCCATGTTCGTGACGGCCGGTGGTTaGAGTGAATGTCGGACTTTTTATATATTCATGGCT +
Preference number: 6 (lower is better)
Translates to: QIKEPMFVTAGG*SECRTFYIFMA
Trigger: AGCCATGAATATATAAAAAGTCCGACATTCACTCCAACCACCGGCCGTCACGAACATGGGCTCTTTAATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381486.7
ENST00000396123.2
CDS CCA 72 bp GGCGATGCAGGTTCTGCCGGACCAAGGGCTACCATTTaGGTAGCACCATTTACAAATACTTTAAATATCACT +
Preference number: 6 (lower is better)
Translates to: GDAGSAGPRATI*VAPFTNTLNIT
Trigger: AGTGATATTTAAAGTATTTGTAAATGGTGCTACCCAAATGGTAGCCCTTGGTCCGGCAGAACCTGCATCGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS CAA 90 bp AATACTTTAAATATCACTGGCTTGGCCTTGCATATTTTCAGCAAGTaGTCAGGAACAGACACTGGTTCTCCAGAGGCCACCACTGGAAAG +
Preference number: 6 (lower is better)
Translates to: NTLNITGLALHIFSK*SGTDTGSPEATTGK
Trigger: CTTTCCAGTGGTGGCCTCTGGAGAACCAGTGTCTGTTCCTGACAACTTGCTGAAAATATGCAAGGCCAAGCCAGTGATATTTAAAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS CAA 90 bp TTTCTCTTTTATGAATTGTCTGGTTTATACGTCCGGATTTCGTATTaGATGTGCCAGCTGGACCAGGTAGTAGACGGTAAGCAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: FLFYELSGLYVRISY*MCQLDQVVDGKQEL
Trigger: CAGCTCCTGCTTACCGTCTACTACCTGGTCCAGCTGGCACATCAAATACGAAATCCGGACGTATAAACCAGACAATTCATAAAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS CAA 72 bp TATGAATTGTCTGGTTTATACGTCCGGATTTCGTATTaGATGTGCCAGCTGGACCAGGTAGTAGACGGTAAG +
Preference number: 6 (lower is better)
Translates to: YELSGLYVRISY*MCQLDQVVDGK
Trigger: CTTACCGTCTACTACCTGGTCCAGCTGGCACATCAAATACGAAATCCGGACGTATAAACCAGACAATTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381483.6
CDS TCA 72 bp ATCACTTGTGAGTTCAATATGCTGTGCAAACAGGCCTaGGTAGGGAAAATGTATTCTAGGTTCCAAGCAACC +
Preference number: 6 (lower is better)
Translates to: ITCEFNMLCKQA*VGKMYSRFQAT
Trigger: GGTTGCTTGGAACCTAGAATACATTTTCCCTACTCAGGCCTGTTTGCACAGCATATTGAACTCACAAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470980.1
CDS CAA 72 bp AAGTTCCCATGGCCTTTAAATATCACTGGCTTGGCCTaGCATATTTTCAGCAAGTTGTCAGGAACAGACACT +
Preference number: 6 (lower is better)
Translates to: KFPWPLNITGLA*HIFSKLSGTDT
Trigger: AGTGTCTGTTCCTGACAACTTGCTGAAAATATGCAAGGCCAAGCCAGTGATATTTAAAGGCCATGGGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234142.9
ENST00000381483.6
ENST00000381486.7
CDS CAA 90 bp TGGGTAGCACCATTTACAAATACTTTAAATATCACTGGCTTGGCCTaGCATATTTTCAGCAAGTTGTCAGGAACAGACACTGGTTCTCCA +
Preference number: 6 (lower is better)
Translates to: WVAPFTNTLNITGLA*HIFSKLSGTDTGSP
Trigger: TGGAGAACCAGTGTCTGTTCCTGACAACTTGCTGAAAATATGCAAGGCCAAGCCAGTGATATTTAAAGTATTTGTAAATGGTGCTACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS CAA 90 bp ACCATTTGGGTAGCACCATTTACAAATACTTTAAATATCACTGGCTaGGCCTTGCATATTTTCAGCAAGTTGTCAGGAACAGACACTGGT +
Preference number: 6 (lower is better)
Translates to: TIWVAPFTNTLNITG*ALHIFSKLSGTDTG
Trigger: ACCAGTGTCTGTTCCTGACAACTTGCTGAAAATATGCAAGGCCAAGCCAGTGATATTTAAAGTATTTGTAAATGGTGCTACCCAAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS TCA 72 bp AAGAAAGAAAGAAAGATTATTCCTCCTAATCACTTGTaGGTTCAATATGCTGTGCAAACAGGCCTGAGTAGG +
Preference number: 6 (lower is better)
Translates to: KKERKIIPPNHL*VQYAVQTGLSR
Trigger: CCTACTCAGGCCTGTTTGCACAGCATATTGAACTCACAAGTGATTAGGAGGAATAATCTTTCTTTCTTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470980.1
CDS CAA 72 bp CCATTTACAAATACTTTAAATATCACTGGCTTGGCCTaGCATATTTTCAGCAAGTTGTCAGGAACAGACACT +
Preference number: 6 (lower is better)
Translates to: PFTNTLNITGLA*HIFSKLSGTDT
Trigger: AGTGTCTGTTCCTGACAACTTGCTGAAAATATGCAAGGCCAAGCCAGTGATATTTAAAGTATTTGTAAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9
CDS CAA 72 bp GTAGCACCATTTACAAATACTTTAAATATCACTGGCTaGGCCTTGCATATTTTCAGCAAGTTGTCAGGAACA +
Preference number: 6 (lower is better)
Translates to: VAPFTNTLNITG*ALHIFSKLSGT
Trigger: TGTTCCTGACAACTTGCTGAAAATATGCAAGGCCAAGCCAGTGATATTTAAAGTATTTGTAAATGGTGCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263834.9