RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRB7 (Homo sapiens)

Ensembl gene IDs: ENSG00000141738

Ensembl transcript IDs: ENST00000309156.9, ENST00000394204.1, ENST00000394209.6, ENST00000394211.7, ENST00000445327.6, ENST00000461756.1, ENST00000473071.1, ENST00000485182.5, ENST00000577695.5, ENST00000578702.5, ENST00000583813.1, ENST00000584053.1, ENST00000584819.5, ENST00000584853.1

Found 530 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTaGGGCATGAGCCAGTCCACGGCCTGGTCAGAGGGCCACCCGCGT +
Preference number: 1 (lower is better)
Translates to: VHWMGGGAAGSLKAG*GMSQSTAWSEGHPR
Trigger: ACGCGGGTGGCCCTCTGACCAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394204.1
3UTR GCA 90 bp CTGAGGCATGAGCCAGTCCACGGCCTGGTCAGAGGGCCACCCGCGTaGAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCT +
Preference number: 1 (lower is better)
Translates to: LRHEPVHGLVRGPPA*SNGAASTAGCRGSA
Trigger: AGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCGTGGACTGGCTCATGCCTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
3UTR GCA 90 bp TTCCGGAAGACGAAGCGGCTATCTCCGCCCACGGGCCAGGCAGCCTaGACTTCCACCACGGACTCGTGGTCCTCCAAACCCCGCTCCAGT +
Preference number: 1 (lower is better)
Translates to: FRKTKRLSPPTGQAA*TSTTDSWSSKPRSS
Trigger: ACTGGAGCGGGGTTTGGAGGACCACGAGTCCGTGGTGGAAGTGCAGGCTGCCTGGCCCGTGGGCGGAGATAGCCGCTTCGTCTTCCGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583813.1
3UTR GCA 90 bp GGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCATAATTCCCTaGCCTAGAGCAGCACCTCCAGAGCTAGGAGAAGGAGAGGGGGCC +
Preference number: 1 (lower is better)
Translates to: GRETAWAAPTSPIIP*PRAAPPELGEGEGA
Trigger: GGCCCCCTCTCCTTCTCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR CCA 90 bp GTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTaGTGGAACTCCACGAGCTGCAGCAGGTCAGTGAAGCGGGTCTGG +
Preference number: 1 (lower is better)
Translates to: VQQWRSKHGRMPRFS*WNSTSCSRSVKRVW
Trigger: CCAGACCCGCTTCACTGACCTGCTGCAGCTCGTGGAGTTCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
3UTR CCA 90 bp AGCTGGTGGAACTCCACGAGCTGCAGCAGGTCAGTGAAGCGGGTCTaGCCATCATCCATGCTGAAGTACAGGCGGCCCTCCTCCTCGCTC +
Preference number: 1 (lower is better)
Translates to: SWWNSTSCSRSVKRV*PSSMLKYRRPSSSL
Trigger: GAGCGAGGAGGAGGGCCGCCTGTACTTCAGCATGGATGATGGCCAGACCCGCTTCACTGACCTGCTGCAGCTCGTGGAGTTCCACCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
3UTR CCA 90 bp CAACTGGCCTCTCGGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTaGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTAGAGCAGCA +
Preference number: 1 (lower is better)
Translates to: QLASRSVQSVGRETA*AAPTSPIIPCPRAA
Trigger: TGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAGAGGCCAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR-3UTR CCA 90 bp CCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCAGCAGAGGAGAAAACTaGAGTGGCGGAACCCTCCCG +
Preference number: 2 (lower is better)
Translates to: PCGRAPESTGWVEGRRAASRGEN*SGGTLP
Trigger: CGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCT...GGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR-3UTR CCA 90 bp CATGAGCCAGTCCACGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCGCATCATCCCGTCCCCTGTaGCCGCGCCCCAGAGTCCAC +
Preference number: 2 (lower is better)
Translates to: HEPVHGLVRGPPACSNGASSRPL*PRPRVH
Trigger: GTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGA...TGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCGTGGACTGGCTCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394204.1
3UTR-3UTR CCA 90 bp GCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGCGCCCCAGAGTCCACTaGATGGGTGGAGGGGCGGCG +
Preference number: 2 (lower is better)
Translates to: AEEKTGVAEPSRSSSRPLRPRVH*MGGGAA
Trigger: CGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG...CAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR-3UTR CCA 90 bp GAGCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGTCCACTGGATGGGTaGAGGGGCGGCGGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: ELGEGEGATQGLPLRRGVSPLDG*RGGGQP
Trigger: AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACT...GACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR-3UTR CCA 90 bp CGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTGGAACCAGAGTCCACTGGATaGGTGGAGGGGCGGCGGGCA +
Preference number: 2 (lower is better)
Translates to: RAAMAQQARQDAAVQLVEPESTG*VEGRRA
Trigger: TGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGG...TTCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394204.1
3UTR-3UTR CCA 90 bp GTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTCCAGAGTCCACTGGATaGGTGGAGGGGCGGCGGGCA +
Preference number: 2 (lower is better)
Translates to: VGRETAWAAPTSPIIPCPPESTG*VEGRRA
Trigger: TGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGG...AGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR-3UTR CCA 90 bp CATGAGCCAGTCCACGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCGCACCGCGGTTCAGCTGGTaGAACTCCACGAGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: HEPVHGLVRGPPACSNGAPRFSW*NSTSCS
Trigger: GCTGCAGCTCGTGGAGTTCCACCAGCTGAACCGCGG...TGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCGTGGACTGGCTCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
3UTR-3UTR TCA 90 bp GAGCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGCCTGAAGGCGGGCTaGGGCATGAGCCAGTCCACG +
Preference number: 2 (lower is better)
Translates to: ELGEGEGATQGLPLRRGVSLKAG*GMSQST
Trigger: CGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCT...GACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR-3UTR TCA 90 bp CGGAAGACGAAGCGGCTATCTCCGCCCACGGGCCAGGCAGCCTGCACTTCCACCTCGTCGCTCAAGGCGTaGGCTCGCTGCACCAGCATT +
Preference number: 2 (lower is better)
Translates to: RKTKRLSPPTGQAACTSTSSLKA*ARCTSI
Trigger: AATGCTGGTGCAGCGAGCTCACGCCTTGAGCGACGA...GGTGGAAGTGCAGGCTGCCTGGCCCGTGGGCGGAGATAGCCGCTTCGTCTTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583813.1
3UTR-3UTR CCA 90 bp CCTCTCGGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCCAGAGTCCACTGGATaGGTGGAGGGGCGGCGGGCA +
Preference number: 2 (lower is better)
Translates to: PLGLYKVWGVKPPGLPPLPESTG*VEGRRA
Trigger: TGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGG...AAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR-3UTR TCA 90 bp AGAGCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTAGCCTGAAGGCGGGCTaGGGCATGAGCCAGTCCACG +
Preference number: 2 (lower is better)
Translates to: RARRRRGGHPRPSLEERGSLKAG*GMSQST
Trigger: CGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCT...ACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR-3UTR TCA 90 bp CCTCTCGGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTAGCCTGAAGGCGGGCTaGGGCATGAGCCAGTCCACG +
Preference number: 2 (lower is better)
Translates to: PLGLYKVWGVKPPGLPPLSLKAG*GMSQST
Trigger: CGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCT...AAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR-3UTR GCA 90 bp CAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGGTCAGAGGGCCATGGAACTCCACGAGCTaGAGCAGGTCAGTGAAGCGG +
Preference number: 2 (lower is better)
Translates to: QPEGGLRHEPVHGLVRGPWNSTS*SRSVKR
Trigger: CCGCTTCACTGACCTGCTGCAGCTCGTGGAGTTCCA...TGGCCCTCTGACCAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
3UTR-3UTR CCA 90 bp GCCCCCACTTCTCCCATAATTCCCTGCCCTAGAGCAGCACCTCCAGAGCTAGGATCATCCCGTCCCCTGTaGCCGCGCCCCAGAGTCCAC +
Preference number: 2 (lower is better)
Translates to: APTSPIIPCPRAAPPELGSSRPL*PRPRVH
Trigger: GTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGA...TCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR-3UTR CCA 90 bp GCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGAGGAGAAAACTGGAGTaGCGGAACCCTCCCGCTCCT +
Preference number: 2 (lower is better)
Translates to: ARRRRGGHPRPSLEERGQRRKLE*RNPPAP
Trigger: AGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCT...CTGACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR-3UTR CCA 90 bp ATTCCCTGCCCTAGAGCAGCACCTCCAGAGCTAGGAGAAGGAGAGGGGGCCACCAGGAGAAAACTGGAGTaGCGGAACCCTCCCGCTCCT +
Preference number: 2 (lower is better)
Translates to: IPCPRAAPPELGEGEGATRRKLE*RNPPAP
Trigger: AGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCT...GGTGGCCCCCTCTCCTTCTCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR-3UTR CCA 90 bp AGAGCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTAGGAGAAAACTGGAGTaGCGGAACCCTCCCGCTCCT +
Preference number: 2 (lower is better)
Translates to: RARRRRGGHPRPSLEERGRRKLE*RNPPAP
Trigger: AGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCT...ACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR-3UTR TCA 90 bp AGAGCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTGGGCTGTTTTCTATCTaGGGGAGGCAAAGAAGCAGA +
Preference number: 2 (lower is better)
Translates to: RARRRRGGHPRPSLEERGGLFSI*GRQRSR
Trigger: TCTGCTTCTTTGCCTCCCTCAGATAGAAAACAGCCC...ACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR CCA 72 bp GTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTaGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGG +
Preference number: 3 (lower is better)
Translates to: VAEPSRSSSRPL*PRPRVHWMGGG
Trigger: CCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR GCA 72 bp GAGCCAGTCCACGGCCTGGTCAGAGGGCCACCCGCGTaGAGCAATGGCGCAGCAAGCACGGCAGGATGCCGC +
Preference number: 3 (lower is better)
Translates to: EPVHGLVRGPPA*SNGAASTAGCR
Trigger: GCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCGTGGACTGGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
3UTR CCA 72 bp CCACGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATaGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGC +
Preference number: 3 (lower is better)
Translates to: PRPGQRATRVQQ*RSKHGRMPRFS
Trigger: GCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
3UTR GCA 72 bp CCCGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGATaGCGCGGTTCAGCTGGTGGAACTCCACGAGCTGCA +
Preference number: 3 (lower is better)
Translates to: PACSNGAASTAG*RGSAGGTPRAA
Trigger: TGCAGCTCGTGGAGTTCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
3UTR GCA 72 bp ACGAAGCGGCTATCTCCGCCCACGGGCCAGGCAGCCTaGACTTCCACCACGGACTCGTGGTCCTCCAAACCC +
Preference number: 3 (lower is better)
Translates to: TKRLSPPTGQAA*TSTTDSWSSKP
Trigger: GGGTTTGGAGGACCACGAGTCCGTGGTGGAAGTGCAGGCTGCCTGGCCCGTGGGCGGAGATAGCCGCTTCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583813.1
3UTR CCA 72 bp TGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTaGTGGAACTCCACGAGCTGCAGCAGGTCAGTGAAG +
Preference number: 3 (lower is better)
Translates to: WRSKHGRMPRFS*WNSTSCSRSVK
Trigger: CTTCACTGACCTGCTGCAGCTCGTGGAGTTCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
3UTR-3UTR CAA 90 bp CTCGGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCACCCAAGGCCTTCCCTaGAGGAGAGGGGTCAGGAGT +
Preference number: 3 (lower is better)
Translates to: LGLYKVWGVKPPGLPPLLTQGLP*RRGVRS
Trigger: ACTCCTGACCCCTCTCCTCAAGGGAAGGCCTTGGGT...GAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR GCA 72 bp ACCGCCTGGGCTGCCCCCACTTCTCCCATAATTCCCTaGCCTAGAGCAGCACCTCCAGAGCTAGGAGAAGGA +
Preference number: 3 (lower is better)
Translates to: TAWAAPTSPIIP*PRAAPPELGEG
Trigger: TCCTTCTCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCAGGCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR CCA 72 bp GAGCAGATCAACTGGCCTCTCGGTCTGTACAAAGTGTaGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTC +
Preference number: 3 (lower is better)
Translates to: EQINWPLGLYKV*GVKPPGLPPLL
Trigger: GAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAGAGGCCAGTTGATCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCGCTCGTGCCGGAGGCTaGCATGGGCAGGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: PCGRAPESTGWVEGRRAAARAGG*HGQAEA
Trigger: CGCCTCAGCCTGCCCATGCCAGCCTCCGGCACGAGC...GGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGCTCGTGCCGGAGGCTaGCATGGGCAGGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPARAGG*HGQAEA
Trigger: CGCCTCAGCCTGCCCATGCCAGCCTCCGGCACGAGC...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCCCAGAGTCCACTGGATaGGTGGAGGGGCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PCGRAPESTGWVEGRRAAPESTG*VEGRRA
Trigger: TGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGG...GGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGCGCCCCAGAGTCCACTaGATGGGTGGAGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLRPRVH*MGGGAA
Trigger: CGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCCGCCCCAGAGTCCACTaGATGGGTGGAGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: AAPQSPLDGWRGGGQPEGRPRVH*MGGGAA
Trigger: CGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG...GCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCGCCCCAGAGTCCACTaGATGGGTGGAGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGRPRVH*MGGGAA
Trigger: CGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGTGGATGGCTGCACTaGGGCTCGTGCCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AAPQSPLDGWRGGGQPEGGGWLH*GSCRRL
Trigger: CAGCCTCCGGCACGAGCCTCAGTGCAGCCATCCACC...GCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGCCCTGGGGGTTCCGCTaGCTCTCCCGGACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLPWGFR*LSRTRN
Trigger: GTTCCTGGTCCGGGAGAGTCAGCGGAACCCCCAGGG...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCAGGCGGGCTGAGGCATaGGCCAGTCCACGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGRRAEA*ASPRPG
Trigger: ACCAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCT...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCACGGGCCAGGCAGCCTaGACTTCCACCACGGACTCG +
Preference number: 4 (lower is better)
Translates to: PCGRAPESTGWVEGRRAATGQAA*TSTTDS
Trigger: CGAGTCCGTGGTGGAAGTGCAGGCTGCCTGGCCCGT...GGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCAGAGGGCCACCCGCGTaGAGCAATGGCGCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: PCGRAPESTGWVEGRRAARGPPA*SNGAAS
Trigger: GCTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCT...GGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp TGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGCTACATGGGGGCGGCTaGCATCGCGGGGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: WPRPRVHWMGGGAAGSLKLHGGG*HRGGAA
Trigger: GGCTGCTCCCCCGCGATGCCAGCCGCCCCCATGTAG...CTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGCTACATGGGGGCGGCTaGCATCGCGGGGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLLHGGG*HRGGAA
Trigger: GGCTGCTCCCCCGCGATGCCAGCCGCCCCCATGTAG...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGAGCCAGTCCACGGCCTaGTCAGAGGGCCACCCGCGT +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGSQSTA*SEGHPR
Trigger: ACGCGGGTGGCCCTCTGACCAGGCCGTGGACTGGCT...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGAGTCCACTGGATGGGTaGAGGGGCGGCGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGSPLDG*RGGGQP
Trigger: AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACT...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTCCAGAGTCCACTGGATaGGTGGAGGGGCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPPESTG*VEGRRA
Trigger: TGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGG...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGTCATCCCGTCCCCTGTaGCCGCGCCCCAGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGSSRPL*PRPRVH
Trigger: GTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGA...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCGTGAAACCGCCTaGGCTGCCCCCACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: AAPQSPLDGWRGGGQPEGGRETA*AAPTSP
Trigger: GGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCC...GCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGGGGCGTGAAACCGCCTaGGCTGCCCCCACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLGRETA*AAPTSP
Trigger: GGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCC...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCCCCGGGGGTTCTCAATaGCACGCCCAGCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: AAPQSPLDGWRGGGQPEGPGGSQ*HAQHGQ
Trigger: CTGGCCATGCTGGGCGTGTCATTGAGAACCCCCGGG...GCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGCCCGGGGGTTCTCAATaGCACGCCCAGCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLPGGSQ*HAQHGQ
Trigger: CTGGCCATGCTGGGCGTGTCATTGAGAACCCCCGGG...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp TGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGGTGGATGGCTGCACTaGGGCTCGTGCCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: WPRPRVHWMGGGAAGSLKGGWLH*GSCRRL
Trigger: CAGCCTCCGGCACGAGCCTCAGTGCAGCCATCCACC...CTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGCCCTGGGGGTTCCGCTaGCTCTCCCGGACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLPWGFR*LSRTRN
Trigger: GTTCCTGGTCCGGGAGAGTCAGCGGAACCCCCAGGG...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp TGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGCCCTGGGGGTTCCGCTaGCTCTCCCGGACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: WPRPRVHWMGGGAAGSLKPWGFR*LSRTRN
Trigger: GTTCCTGGTCCGGGAGAGTCAGCGGAACCCCCAGGG...CTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGAGCCTGAAGGCGGGCTaGGGCATGAGCCAGTCCACG +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGSLKAG*GMSQST
Trigger: CGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCT...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGACAAAGTGTGGGGCGTaGAACCGCCTGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLTKCGA*NRLGCP
Trigger: GGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGT...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGACGGGCCAGGCAGCCTaGACTTCCACCACGGACTCG +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLTGQAA*TSTTDS
Trigger: CGAGTCCGTGGTGGAAGTGCAGGCTGCCTGGCCCGT...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGGGTGCGGTGGATGGCTaGACTGAGGCTCGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGGAVDG*TEARAG
Trigger: TCCGGCACGAGCCTCAGTGCAGCCATCCACCGCACC...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGGGTGCGGTGGATGGCTaGACTGAGGCTCGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLGAVDG*TEARAG
Trigger: TCCGGCACGAGCCTCAGTGCAGCCATCCACCGCACC...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCGCAAGCACGGCAGGATaGCGCGGTTCAGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: PCGRAPESTGWVEGRRAAASTAG*RGSAGG
Trigger: TCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGC...GGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAGAGGGCCACCCGCGTaGAGCAATGGCGCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLRGPPA*SNGAAS
Trigger: GCTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCT...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTAGAGGGCCACCCGCGTaGAGCAATGGCGCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPRGPPA*SNGAAS
Trigger: GCTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCT...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGAGAGGGCCACCCGCGTaGAGCAATGGCGCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGRGPPA*SNGAAS
Trigger: GCTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCT...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTAGTGCTAGGTGGGGGTaGCACTCCACCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPSARWG*HSTSPQ
Trigger: CTGGGGGCTGGTGGAGTGCCACCCCCACCTAGCACT...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCAGTGCTAGGTGGGGGTaGCACTCCACCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGSARWG*HSTSPQ
Trigger: CTGGGGGCTGGTGGAGTGCCACCCCCACCTAGCACT...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGGCTCGTGCCGGAGGCTaGCATGGGCAGGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: PHPVPCGRAPESTGWVEGARAGG*HGQAEA
Trigger: CGCCTCAGCCTGCCCATGCCAGCCTCCGGCACGAGC...CCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAAGCCAGTCCACGGCCTaGTCAGAGGGCCACCCGCGT +
Preference number: 4 (lower is better)
Translates to: VAAPQSPLDGWRGGGQPESQSTA*SEGHPR
Trigger: ACGCGGGTGGCCCTCTGACCAGGCCGTGGACTGGCT...TTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGTCCACTGGATGGGTaGAGGGGCGGCGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLSPLDG*RGGGQP
Trigger: AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACT...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAACCAGAGTCCACTGGATaGGTGGAGGGGCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: VAAPQSPLDGWRGGGQPEPESTG*VEGRRA
Trigger: TGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGG...TTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGCCCCAGAGTCCACTaGATGGGTGGAGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: PHPVPCGRAPESTGWVEGRPRVH*MGGGAA
Trigger: CGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG...CCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp TGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGCCCGGGGGTTCTCAATaGCACGCCCAGCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: WPRPRVHWMGGGAAGSLKPGGSQ*HAQHGQ
Trigger: CTGGCCATGCTGGGCGTGTCATTGAGAACCCCCGGG...CTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGAGCCTGAAGGCGGGCTaGGGCATGAGCCAGTCCACG +
Preference number: 4 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLSLKAG*GMSQST
Trigger: CGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCT...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGACAAAGTGTGGGGCGTaGAACCGCCTGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLTKCGA*NRLGCP
Trigger: GGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGT...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGACGGGCCAGGCAGCCTaGACTTCCACCACGGACTCG +
Preference number: 4 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLTGQAA*TSTTDS
Trigger: CGAGTCCGTGGTGGAAGTGCAGGCTGCCTGGCCCGT...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGGCATCCCGTAGAGCTTaGGGCCCTGCGTCACCACGT +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGASRRA*GPASPR
Trigger: ACGTGGTGACGCAGGGCCGCAAGCTCTACGGGATGC...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGCAAGCACGGCAGGATaGCGCGGTTCAGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: AAPQSPLDGWRGGGQPEGASTAG*RGSAGG
Trigger: TCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGC...GCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGCAAGCACGGCAGGATaGCGCGGTTCAGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPASTAG*RGSAGG
Trigger: TCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGC...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGAGGGGTCCCAGGGGCTaGGCAAAGGTCTTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGRGPRG*AKVFRR
Trigger: TCTCCGGAAGACCTTTGCCCAGCCCCTGGGACCCCT...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGACTACATGGGGGCGGCTaGCATCGCGGGGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: RSSSRPLWPRPRVHWMGGLHGGG*HRGGAA
Trigger: GGCTGCTCCCCCGCGATGCCAGCCGCCCCCATGTAG...TCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCACACGTGGCGAGCTGTaGCACCTGCTGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGTRGEL*HLLPPP
Trigger: TGGAGGTGGCAGCAGGTGCCACAGCTCGCCACGTGT...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGACACGTGGCGAGCTGTaGCACCTGCTGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLTRGEL*HLLPPP
Trigger: TGGAGGTGGCAGCAGGTGCCACAGCTCGCCACGTGT...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp TGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGCGCTCCAGTGCTAGGTaGGGGTGGCACTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: WPRPRVHWMGGGAAGSLKRSSAR*GWHSTS
Trigger: GCTGGTGGAGTGCCACCCCCACCTAGCACTGGAGCG...CTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGCGCTCCAGTGCTAGGTaGGGGTGGCACTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLRSSAR*GWHSTS
Trigger: GCTGGTGGAGTGCCACCCCCACCTAGCACTGGAGCG...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTTCCACCACGGACTCGTaGTCCTCCAAACCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPSTTDS*SSKPRS
Trigger: GGAGCGGGGTTTGGAGGACCACGAGTCCGTGGTGGA...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGACCCGCGTGCAGCAATaGCGCAGCAAGCACGGCAGG +
Preference number: 4 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLTRVQQ*RSKHGR
Trigger: CCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGGT...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGACCCGCGTGCAGCAATaGCGCAGCAAGCACGGCAGG +
Preference number: 4 (lower is better)
Translates to: EWRNPPAPHPVPCGRAPETRVQQ*RSKHGR
Trigger: CCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGGT...CTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGAGTCCACTGGATGGGTaGAGGGGCGGCGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PHPVPCGRAPESTGWVEGSPLDG*RGGGQP
Trigger: AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACT...CCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGCCAGAGTCCACTGGATaGGTGGAGGGGCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RPGQRATRVQQWRSKHGRPESTG*VEGRRA
Trigger: TGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGG...CCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR TCA 90 bp CCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCGAGAATTGGGCTCTGTaGGGGAGGACTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: PCGRAPESTGWVEGRRAAENWAL*GRTAEL
Trigger: GAGCTCTGCAGTCCTCCCTCACAGAGCCCAATTCTC...GGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTCGTCGCTCAAGGCGTaGGCTCGCTGCACCAGCATT +
Preference number: 4 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGSSLKA*ARCTSI
Trigger: AATGCTGGTGCAGCGAGCTCACGCCTTGAGCGACGA...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGTCGTCGCTCAAGGCGTaGGCTCGCTGCACCAGCATT +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLSSLKA*ARCTSI
Trigger: AATGCTGGTGCAGCGAGCTCACGCCTTGAGCGACGA...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCCCAAAGCTTCCGTCCTaGACCCCGCAGCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PCGRAPESTGWVEGRRAAPKLPS*TPQLQK
Trigger: TTTCTGCAGCTGCGGGGTTCAGGACGGAAGCTTTGG...GGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTCTGGCATGGGCAGGCTaGGGCGGTGGTTTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPLAWAG*GGGLSS
Trigger: AGAAGACAAACCACCGCCTCAGCCTGCCCATGCCAG...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGGGCCATCATCCATGCTaGAGTACAGGCGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGGHHPC*STGGPP
Trigger: AGGAGGGCCGCCTGTACTTCAGCATGGATGATGGCC...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGGCCATCATCCATGCTaGAGTACAGGCGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPGHHPC*STGGPP
Trigger: AGGAGGGCCGCCTGTACTTCAGCATGGATGATGGCC...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGGGCCATCATCCATGCTaGAGTACAGGCGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLGHHPC*STGGPP
Trigger: AGGAGGGCCGCCTGTACTTCAGCATGGATGATGGCC...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGGCTGCAGCAGGTCAGTaGAGCGGGTCTGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGAAAGQ*SGSGHH
Trigger: ATGATGGCCAGACCCGCTTCACTGACCTGCTGCAGC...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGGCTGCAGCAGGTCAGTaGAGCGGGTCTGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLAAAGQ*SGSGHH
Trigger: ATGATGGCCAGACCCGCTTCACTGACCTGCTGCAGC...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCGCTGCAGCAGGTCAGTaGAGCGGGTCTGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGAAAGQ*SGSGHH
Trigger: ATGATGGCCAGACCCGCTTCACTGACCTGCTGCAGC...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGAGGAACAGGCTGCACTaGGGCTCGTGCCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PHPVPCGRAPESTGWVEGRNRLH*GSCRRL
Trigger: CAGCCTCCGGCACGAGCCTCAGTGCAGCCTGTTCCT...CCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR GCA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGCCACCTCCACAGACCTaGAGGCCCCATCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKAPPPQT*RPHPHC
Trigger: ACAGTGAGGATGGGGCCTGCAGGTCTGTGGAGGTGG...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAGCTGTGGCACCTGCTaGCACCTCCACAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLSCGTC*HLHRPA
Trigger: TGCAGGTCTGTGGAGGTGGCAGCAGGTGCCACAGCT...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGAGCTGTGGCACCTGCTaGCACCTCCACAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKASCGTC*HLHRPA
Trigger: TGCAGGTCTGTGGAGGTGGCAGCAGGTGCCACAGCT...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGCAGCCAGCCAGCAGGTaGGGCTCTGCTCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKAQPASR*GSAHLH
Trigger: GTGAAGATGAGCAGAGCCGCACCTGCTGGCTGGCTG...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGCAGGGGGCCACGCCTaGCTCGAAATCACAGACCAA +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPAGGHA*LEITDQ
Trigger: TTGGTCTGTGATTTCGAGGCAGGCGTGGCCCCCTGC...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394209.6
CDS-3UTR CCA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGACCCGTTCCGAAGTCTaGCTCCGTCTAGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKATRSEV*LRLGTP
Trigger: GGGGGTTCCTAGACGGAGCCAGACTTCGGAACGGGT...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309156.9
CDS-3UTR CCA 90 bp GAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGAGGGGTCCCAGGGGCTaGGCAAAGGTCTTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: EWRNPPAPHPVPCGRAPERGPRG*AKVFRR
Trigger: TCTCCGGAAGACCTTTGCCCAGCCCCTGGGACCCCT...CTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAAGGGGTCCCAGGGGCTaGGCAAAGGTCTTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: VAAPQSPLDGWRGGGQPERGPRG*AKVFRR
Trigger: TCTCCGGAAGACCTTTGCCCAGCCCCTGGGACCCCT...TTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp TGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGACACGTGGCGAGCTGTaGCACCTGCTGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: WPRPRVHWMGGGAAGSLKTRGEL*HLLPPP
Trigger: TGGAGGTGGCAGCAGGTGCCACAGCTCGCCACGTGT...CTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAATCCACCACGGACTCGTaGTCCTCCAAACCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: VAAPQSPLDGWRGGGQPESTTDS*SSKPRS
Trigger: GGAGCGGGGTTTGGAGGACCACGAGTCCGTGGTGGA...TTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp TGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGTCCACCACGGACTCGTaGTCCTCCAAACCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: WPRPRVHWMGGGAAGSLKSTTDS*SSKPRS
Trigger: GGAGCGGGGTTTGGAGGACCACGAGTCCGTGGTGGA...CTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGCCGTGGAACCAGAGTTaGGTGCGGTGGATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKAPWNQS*VRWMAA
Trigger: TGCAGCCATCCACCGCACCCAACTCTGGTTCCACGG...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGCCGCGGTTCAGCTGGTaGAACTCCACGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLPRFSW*NSTSCS
Trigger: GCTGCAGCTCGTGGAGTTCCACCAGCTGAACCGCGG...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAACCGCGGTTCAGCTGGTaGAACTCCACGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VAAPQSPLDGWRGGGQPEPRFSW*NSTSCS
Trigger: GCTGCAGCTCGTGGAGTTCCACCAGCTGAACCGCGG...TTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp TGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGCCGCGGTTCAGCTGGTaGAACTCCACGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WPRPRVHWMGGGAAGSLKPRFSW*NSTSCS
Trigger: GCTGCAGCTCGTGGAGTTCCACCAGCTGAACCGCGG...CTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCATGCCGCGGTTCAGCTaGTGGAACTCCACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AAPQSPLDGWRGGGQPEGMPRFS*WNSTSC
Trigger: GCAGCTCGTGGAGTTCCACCAGCTGAACCGCGGCAT...GCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGATGCCGCGGTTCAGCTaGTGGAACTCCACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGMPRFS*WNSTSC
Trigger: GCAGCTCGTGGAGTTCCACCAGCTGAACCGCGGCAT...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGACCCGCGTGCAGCAATaGCGCAGCAAGCACGGCAGG +
Preference number: 4 (lower is better)
Translates to: PHPVPCGRAPESTGWVEGTRVQQ*RSKHGR
Trigger: CCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGGT...CCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGTCATCCCGTCCCCTGTaGCCGCGCCCCAGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: APHPVPCGRAPESTGWVESSRPL*PRPRVH
Trigger: GTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGA...CTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGAGAGGGGTCAGGAGTaGACTGGAGTGGGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: AAPQSPLDGWRGGGQPEGERGQE*TGVGAV
Trigger: AACAGCCCCCACTCCAGTCCACTCCTGACCCCTCTC...GCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGAGAATTGGGCTCTGTaGGGGAGGACTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: AAPQSPLDGWRGGGQPEGENWAL*GRTAEL
Trigger: GAGCTCTGCAGTCCTCCCTCACAGAGCCCAATTCTC...GCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp TGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGCTGGCATGGGCAGGCTaGGGCGGTGGTTTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: WPRPRVHWMGGGAAGSLKLAWAG*GGGLSS
Trigger: AGAAGACAAACCACCGCCTCAGCCTGCCCATGCCAG...CTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGGGCCATCATCCATGCTaGAGTACAGGCGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLGHHPC*STGGPP
Trigger: AGGAGGGCCGCCTGTACTTCAGCATGGATGATGGCC...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAAGCCTGAAGGCGGGCTaGGGCATGAGCCAGTCCACG +
Preference number: 4 (lower is better)
Translates to: RSSSRPLWPRPRVHWMGGSLKAG*GMSQST
Trigger: CGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCT...TCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGACAAAGTGTGGGGCGTaGAACCGCCTGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LLIPSPVAAPQSPLDGWRTKCGA*NRLGCP
Trigger: GGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGT...CCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGACGGGCCAGGCAGCCTaGACTTCCACCACGGACTCG +
Preference number: 4 (lower is better)
Translates to: LLIPSPVAAPQSPLDGWRTGQAA*TSTTDS
Trigger: CGAGTCCGTGGTGGAAGTGCAGGCTGCCTGGCCCGT...CCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGCCTGAACCCCGCAGCTaGAGAAAGCCCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKAPEPRS*RKPWIS
Trigger: TGAGATCCAGGGCTTTCTGCAGCTGCGGGGTTCAGG...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGCCACGTACTGCAGGTaGCTCGGATCCTTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPATYCR*LGSLEV
Trigger: CACCTCTAAGGATCCGAGGCACCTGCAGTACGTGGC...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCGGACTCGTTCACATCTaGCACGTACTGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PCGRAPESTGWVEGRRAAGLVHI*HVLQVP
Trigger: AGGCACCTGCAGTACGTGGCAGATGTGAACGAGTCC...GGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCCAGCAGGTGCGGCTCTaGTCATCTTCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PCGRAPESTGWVEGRRAAQQVRL*SSSLQK
Trigger: CTTCTGCAGTGAAGATGAGCAGAGCCGCACCTGCTG...GGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGCAGCCAGCCAGCAGGTaGGGCTCTGCTCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLQPASR*GSAHLH
Trigger: GTGAAGATGAGCAGAGCCGCACCTGCTGGCTGGCTG...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCCCGTCTACCAAGCCCTaGTGTCCAATAAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGPSTKP*CPISRW
Trigger: CCAGCGGCTTATTGGACAGCAGGGCTTGGTAGACGG...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGCCGTCTACCAAGCCCTaGTGTCCAATAAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLPSTKP*CPISRW
Trigger: CCAGCGGCTTATTGGACAGCAGGGCTTGGTAGACGG...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTTGGAACTCCACGAGCTaGAGCAGGTCAGTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPWNSTS*SRSVKR
Trigger: CCGCTTCACTGACCTGCTGCAGCTCGTGGAGTTCCA...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGTGGAACTCCACGAGCTaGAGCAGGTCAGTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKAWNSTS*SRSVKR
Trigger: CCGCTTCACTGACCTGCTGCAGCTCGTGGAGTTCCA...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGGCAAGCACGGCAGGATaGCGCGGTTCAGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LPLLIPSPVAAPQSPLDGASTAG*RGSAGG
Trigger: TCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGC...CCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGACGGAACCAGTTGTGTaGCCTTGTCCCGGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLTEPVV*PCPGLH
Trigger: GTGGAGGCCGGGACAAGGGCACACAACTGGTTCCGT...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445327.6
CDS-3UTR CCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGTTTCCTGCCGGTGGTTaGGATGAGGAGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGFPAGG*DEERLG
Trigger: TCCCAGCCTCTCCTCATCCCAACCACCGGCAGGAAA...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTTTCCTGCCGGTGGTTaGGATGAGGAGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGFPAGG*DEERLG
Trigger: TCCCAGCCTCTCCTCATCCCAACCACCGGCAGGAAA...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGTTTCCTGCCGGTGGTTaGGATGAGGAGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLFPAGG*DEERLG
Trigger: TCCCAGCCTCTCCTCATCCCAACCACCGGCAGGAAA...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGTACACCTTTACTACATaGGGGCGGCTGGCATCGCGG +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLYTFTT*GRLASR
Trigger: CCGCGATGCCAGCCGCCCCCATGTAGTAAAGGTGTA...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGTACACCTTTACTACATaGGGGCGGCTGGCATCGCGG +
Preference number: 4 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKAYTFTT*GRLASR
Trigger: CCGCGATGCCAGCCGCCCCCATGTAGTAAAGGTGTA...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGTCCACCACGGACTCGTaGTCCTCCAAACCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RPGQRATRVQQWRSKHGRSTTDS*SSKPRS
Trigger: GGAGCGGGGTTTGGAGGACCACGAGTCCGTGGTGGA...CCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp GCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCATGACACGCCCAGCATaGCCAGAGAAGTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: AAPQSPLDGWRGGGQPEGMTRPA*PEKSMA
Trigger: GGCCATGGACTTCTCTGGCCATGCTGGGCGTGTCAT...GCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGGGCAGGCTGAGGCGGTaGTTTGTCTTCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLGRLRR*FVFFLQ
Trigger: CTGGAGGAAGAAGACAAACCACCGCCTCAGCCTGCC...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGGGCAGGCTGAGGCGGTaGTTTGTCTTCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGGRLRR*FVFFLQ
Trigger: CTGGAGGAAGAAGACAAACCACCGCCTCAGCCTGCC...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGCAGAGTTGGGTGCGGTaGATGGCTGCACTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLQSWVR*MAALRL
Trigger: GAGCCTCAGTGCAGCCATCCACCGCACCCAACTCTG...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGCAGAGTTGGGTGCGGTaGATGGCTGCACTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: EWRNPPAPHPVPCGRAPEQSWVR*MAALRL
Trigger: GAGCCTCAGTGCAGCCATCCACCGCACCCAACTCTG...CTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCCGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTTCATCCCGTCCCCTGTaGCCGCGCCCCAGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: PACSNGAASTAGCRGSAGSSRPL*PRPRVH
Trigger: GTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGA...ACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp GAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGGAGAGGGGTCAGGAGTaGACTGGAGTGGGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: EWRNPPAPHPVPCGRAPEERGQE*TGVGAV
Trigger: AACAGCCCCCACTCCAGTCCACTCCTGACCCCTCTC...CTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGGAGAGGGGTCAGGAGTaGACTGGAGTGGGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLERGQE*TGVGAV
Trigger: AACAGCCCCCACTCCAGTCCACTCCTGACCCCTCTC...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGTCTGTACAAAGTGTaGGGCGTGAAACCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKAGLYKV*GVKPPG
Trigger: CCCAGGCGGTTTCACGCCCCACACTTTGTACAGACC...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGCAGCTCCATGGCGTCTaGGCAAGAGAGGGGCTTAAC +
Preference number: 4 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLQLHGV*AREGLN
Trigger: GTTAAGCCCCTCTCTTGCTCAGACGCCATGGAGCTG...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp TGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGCAGCTCCATGGCGTCTaGGCAAGAGAGGGGCTTAAC +
Preference number: 4 (lower is better)
Translates to: WPRPRVHWMGGGAAGSLKQLHGV*AREGLN
Trigger: GTTAAGCCCCTCTCTTGCTCAGACGCCATGGAGCTG...CTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGGAGAGCTGCTAAGATaGGGTGGAGACAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPGELLR*GGDRSS
Trigger: GCTGGATCTGTCTCCACCTCATCTTAGCAGCTCTCC...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp TGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGAGAATTGGGCTCTGTaGGGGAGGACTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: WPRPRVHWMGGGAAGSLKENWAL*GRTAEL
Trigger: GAGCTCTGCAGTCCTCCCTCACAGAGCCCAATTCTC...CTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGCCAAAGCTTCCGTCCTaGACCCCGCAGCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLPKLPS*TPQLQK
Trigger: TTTCTGCAGCTGCGGGGTTCAGGACGGAAGCTTTGG...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTGGAGCCTGAAGGCGGGCTaGGGCATGAGCCAGTCCACG +
Preference number: 4 (lower is better)
Translates to: RVQQWRSKHGRMPRFSWWSLKAG*GMSQST
Trigger: CGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCT...CCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR GCA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGACGGAACCAGTTGTGTaGCCTTGTCCTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLTEPVV*PCPGGA
Trigger: GGCTCCTCCAGGACAAGGGCACACAACTGGTTCCGT...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309156.9
CDS-3UTR GCA 90 bp CCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGAGCTGTGGCACCTGCTaGCACCTCCACAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: PHPVPCGRAPESTGWVEGSCGTC*HLHRPA
Trigger: TGCAGGTCTGTGGAGGTGGCAGCAGGTGCCACAGCT...CCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGACTCGTTCACATCTaGCACGTACTGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKAGLVHI*HVLQVP
Trigger: AGGCACCTGCAGTACGTGGCAGATGTGAACGAGTCC...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGGGACTCGTTCACATCTaGCACGTACTGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGGLVHI*HVLQVP
Trigger: AGGCACCTGCAGTACGTGGCAGATGTGAACGAGTCC...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGCATCCCGTAGAGCTTaGGGCCCTGCGTCACCACGT +
Preference number: 4 (lower is better)
Translates to: RSSSRPLWPRPRVHWMGGASRRA*GPASPR
Trigger: ACGTGGTGACGCAGGGCCGCAAGCTCTACGGGATGC...TCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGCAGCAGGTGCGGCTCTaGTCATCTTCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKAQQVRL*SSSLQK
Trigger: CTTCTGCAGTGAAGATGAGCAGAGCCGCACCTGCTG...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCCAGCAGGTGCGGCTCTaGTCATCTTCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGQQVRL*SSSLQK
Trigger: CTTCTGCAGTGAAGATGAGCAGAGCCGCACCTGCTG...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGCAGCCAGCCAGCAGGTaGGGCTCTGCTCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: RPGQRATRVQQWRSKHGRQPASR*GSAHLH
Trigger: GTGAAGATGAGCAGAGCCGCACCTGCTGGCTGGCTG...CCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR GCA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTCTCCTCACGGGAAATaGGCCCGTGGAACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGSPHGK*ARGTRV
Trigger: AACTCTGGTTCCACGGGCGCATTTCCCGTGAGGAGA...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGCCGTCTACCAAGCCCTaGTGTCCAATAAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLPSTKP*CPISRW
Trigger: CCAGCGGCTTATTGGACAGCAGGGCTTGGTAGACGG...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGGGATGAGGAGAGGCTaGGACCTCTTTACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPGMRRG*DLFTSS
Trigger: TGAGGAGGTAAAGAGGTCCCAGCCTCTCCTCATCCC...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGGGGATGAGGAGAGGCTaGGACCTCTTTACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGGMRRG*DLFTSS
Trigger: TGAGGAGGTAAAGAGGTCCCAGCCTCTCCTCATCCC...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAATACACCTTTACTACATaGGGGCGGCTGGCATCGCGG +
Preference number: 4 (lower is better)
Translates to: VAAPQSPLDGWRGGGQPEYTFTT*GRLASR
Trigger: CCGCGATGCCAGCCGCCCCCATGTAGTAAAGGTGTA...TTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGTACACCTTTACTACATaGGGGCGGCTGGCATCGCGG +
Preference number: 4 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLYTFTT*GRLASR
Trigger: CCGCGATGCCAGCCGCCCCCATGTAGTAAAGGTGTA...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCCAGTCCACGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCGCAGCAAGACACGTGGCGAGCTGTaGCACCTGCTGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: ASPRPGQRATRVQQWRSKTRGEL*HLLPPP
Trigger: TGGAGGTGGCAGCAGGTGCCACAGCTCGCCACGTGT...CTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCGTGGACTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGAGCATTTCACACACGTaGCGAGCTGTGGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKASISHT*RAVAPA
Trigger: AGCAGGTGCCACAGCTCGCCACGTGTGTGAAATGCT...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAGCATTTCACACACGTaGCGAGCTGTGGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLSISHT*RAVAPA
Trigger: AGCAGGTGCCACAGCTCGCCACGTGTGTGAAATGCT...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTGGAGTGCTAGGTGGGGGTaGCACTCCACCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: RVQQWRSKHGRMPRFSWWSARWG*HSTSPQ
Trigger: CTGGGGGCTGGTGGAGTGCCACCCCCACCTAGCACT...CCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp CCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGGGAACAGGGAGTGTaGGGAGCTCTTGAACAGTTC +
Preference number: 4 (lower is better)
Translates to: PCGRAPESTGWVEGRRAAWEQGV*GALEQF
Trigger: GAACTGTTCAAGAGCTCCCCACACTCCCTGTTCCCA...GGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCGGAGCCCAAACAAGATaGATGCAGATGGCGAGACTG +
Preference number: 4 (lower is better)
Translates to: PCGRAPESTGWVEGRRAAGAQTR*MQMARL
Trigger: CAGTCTCGCCATCTGCATCCATCTTGTTTGGGCTCC...GGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCACTTCTCAAGGGTaGGGAGCCCAAACAAGATGG +
Preference number: 4 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKAGTSQG*GAQTRW
Trigger: CCATCTTGTTTGGGCTCCCCACCCTTGAGAAGTGCC...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp TGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGATGACACGCCCAGCATaGCCAGAGAAGTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: WPRPRVHWMGGGAAGSLKMTRPA*PEKSMA
Trigger: GGCCATGGACTTCTCTGGCCATGCTGGGCGTGTCAT...CTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTGGAAGCTCGTGCCGGAGGCTaGCATGGGCAGGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: RAAMAQQARQDAAVQLVEARAGG*HGQAEA
Trigger: CGCCTCAGCCTGCCCATGCCAGCCTCCGGCACGAGC...TTCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp GCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGGCTCGTGCCGGAGGCTaGCATGGGCAGGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: ARRRRGGHPRPSLEERGQARAGG*HGQAEA
Trigger: CGCCTCAGCCTGCCCATGCCAGCCTCCGGCACGAGC...CTGACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGCCGTGGAACCAGAGTTaGGTGCGGTGGATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LPLLIPSPVAAPQSPLDGPWNQS*VRWMAA
Trigger: TGCAGCCATCCACCGCACCCAACTCTGGTTCCACGG...CCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGAGGAGAAAACTGGAGTaGCGGAACCCTCCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: EWRNPPAPHPVPCGRAPERRKLE*RNPPAP
Trigger: AGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCT...CTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGAGCAGAGGAGAAAACTaGAGTGGCGGAACCCTCCCG +
Preference number: 4 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLSRGEN*SGGTLP
Trigger: CGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCT...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGGGAGAGCTGCTAAGATaGGGTGGAGACAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLGELLR*GGDRSS
Trigger: GCTGGATCTGTCTCCACCTCATCTTAGCAGCTCTCC...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGGGAGAGCTGCTAAGATaGGGTGGAGACAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: EWRNPPAPHPVPCGRAPEGELLR*GGDRSS
Trigger: GCTGGATCTGTCTCCACCTCATCTTAGCAGCTCTCC...CTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGGAGAATTGGGCTCTGTaGGGGAGGACTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: PHPVPCGRAPESTGWVEGENWAL*GRTAEL
Trigger: GAGCTCTGCAGTCCTCCCTCACAGAGCCCAATTCTC...CCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAGTGTGGGGAGCTCTTaGACAGTTCGTACTTGGCGA +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLSVGSS*TVRTWR
Trigger: TCGCCAAGTACGAACTGTTCAAGAGCTCCCCACACT...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGCTGGCATGGGCAGGCTaGGGCGGTGGTTTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLIPSPVAAPQSPLDGWRLAWAG*GGGLSS
Trigger: AGAAGACAAACCACCGCCTCAGCCTGCCCATGCCAG...CCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGGGTGGATGGCTGCACTaGGGCTCGTGCCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ARRRRGGHPRPSLEERGQGGWLH*GSCRRL
Trigger: CAGCCTCCGGCACGAGCCTCAGTGCAGCCATCCACC...CTGACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGCCCTGGGGGTTCCGCTaGCTCTCCCGGACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ARRRRGGHPRPSLEERGQPWGFR*LSRTRN
Trigger: GTTCCTGGTCCGGGAGAGTCAGCGGAACCCCCAGGG...CTGACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GCCAGTCCACGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCGCAGCAAGGCTGCAGCAGGTCAGTaGAGCGGGTCTGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: ASPRPGQRATRVQQWRSKAAAGQ*SGSGHH
Trigger: ATGATGGCCAGACCCGCTTCACTGACCTGCTGCAGC...CTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCGTGGACTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR TCA 90 bp GTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTAGGCGGGCTGAGGCATaGGCCAGTCCACGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: VGRETAWAAPTSPIIPCPRRAEA*ASPRPG
Trigger: ACCAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCT...AGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCACATCTGCCACGTACTaGAGGTGCCTCGGATCCTTA +
Preference number: 4 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGTSATY*RCLGSL
Trigger: TAAGGATCCGAGGCACCTGCAGTACGTGGCAGATGT...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GCGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTGGAAGAGGGCCACCCGCGTaGAGCAATGGCGCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: ACSNGAASTAGCRGSAGGRGPPA*SNGAAS
Trigger: GCTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCT...TCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR GCA 90 bp GTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAACGGAACCAGTTGTGTaGCCTTGTCCTGAACCCCGA +
Preference number: 4 (lower is better)
Translates to: VAAPQSPLDGWRGGGQPETEPVV*PCPEPR
Trigger: TCGGGGTTCAGGACAAGGGCACACAACTGGTTCCGT...TTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394211.7
CDS-3UTR GCA 90 bp GCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCACGGAACCAGTTGTGTaGCCTTGTCCTCCAAACAGC +
Preference number: 4 (lower is better)
Translates to: AAPQSPLDGWRGGGQPEGTEPVV*PCPPNS
Trigger: GCTGTTTGGAGGACAAGGGCACACAACTGGTTCCGT...GCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394209.6
CDS-3UTR CCA 90 bp CCCGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTAGGGGTCCCAGGGGCTaGGCAAAGGTCTTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: PACSNGAASTAGCRGSAGRGPRG*AKVFRR
Trigger: TCTCCGGAAGACCTTTGCCCAGCCCCTGGGACCCCT...ACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp GGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCACTACATGGGGGCGGCTaGCATCGCGGGGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GLYKVWGVKPPGLPPLLPLHGGG*HRGGAA
Trigger: GGCTGCTCCCCCGCGATGCCAGCCGCCCCCATGTAG...TGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp ATTCCCTGCCCTAGAGCAGCACCTCCAGAGCTAGGAGAAGGAGAGGGGGCCACCCTACATGGGGGCGGCTaGCATCGCGGGGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: IPCPRAAPPELGEGEGATLHGGG*HRGGAA
Trigger: GGCTGCTCCCCCGCGATGCCAGCCGCCCCCATGTAG...GGTGGCCCCCTCTCCTTCTCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GTGCTAGGTGGGGGTGGCACTCCACCAGCCCCCAGGTCTCGTCGCTCAAGGCGTACACGTGGCGAGCTGTaGCACCTGCTGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: VLGGGGTPPAPRSRRSRRTRGEL*HLLPPP
Trigger: TGGAGGTGGCAGCAGGTGCCACAGCTCGCCACGTGT...ACGCCTTGAGCGACGAGACCTGGGGGCTGGTGGAGTGCCACCCCCACCTAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS-3UTR CCA 90 bp GCCAGGCAGCCTGCACTTCCACCACGGACTCGTGGTCCTCCAAACCCCGCTCCAAGTGCTAGGTGGGGGTaGCACTCCACCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: ARQPALPPRTRGPPNPAPSARWG*HSTSPQ
Trigger: CTGGGGGCTGGTGGAGTGCCACCCCCACCTAGCACT...TGGAGCGGGGTTTGGAGGACCACGAGTCCGTGGTGGAAGTGCAGGCTGCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS-3UTR CCA 90 bp GCCAGGCAGCCTGCACTTCCACCACGGACTCGTGGTCCTCCAAACCCCGCTCCACGCTCCAGTGCTAGGTaGGGGTGGCACTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: ARQPALPPRTRGPPNPAPRSSAR*GWHSTS
Trigger: GCTGGTGGAGTGCCACCCCCACCTAGCACTGGAGCG...TGGAGCGGGGTTTGGAGGACCACGAGTCCGTGGTGGAAGTGCAGGCTGCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS-3UTR CCA 90 bp GCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCAGAAACCGAAGTCAGTaGGCATCCCGTAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: AAPQSPLDGWRGGGQPEGRNRSQ*ASRRAC
Trigger: GCAAGCTCTACGGGATGCCCACTGACTTCGGTTTCT...GCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGGGAGCCCAAACAAGATaGATGCAGATGGCGAGACTG +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGGAQTR*MQMARL
Trigger: CAGTCTCGCCATCTGCATCCATCTTGTTTGGGCTCC...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGGGCACTTCTCAAGGGTaGGGAGCCCAAACAAGATGG +
Preference number: 4 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLGTSQG*GAQTRW
Trigger: CCATCTTGTTTGGGCTCCCCACCCTTGAGAAGTGCC...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGGGCACTTCTCAAGGGTaGGGAGCCCAAACAAGATGG +
Preference number: 4 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLGTSQG*GAQTRW
Trigger: CCATCTTGTTTGGGCTCCCCACCCTTGAGAAGTGCC...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCACTTCTCAAGGGTaGGGAGCCCAAACAAGATGG +
Preference number: 4 (lower is better)
Translates to: VAAPQSPLDGWRGGGQPEGTSQG*GAQTRW
Trigger: CCATCTTGTTTGGGCTCCCCACCCTTGAGAAGTGCC...TTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGTGTCCAATAAGCCGCTaGCTCTCCTCACGGGAAATG +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGCPISR*LSSREM
Trigger: CATTTCCCGTGAGGAGAGCCAGCGGCTTATTGGACA...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTTGTCCAATAAGCCGCTaGCTCTCCTCACGGGAAATG +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPCPISR*LSSREM
Trigger: CATTTCCCGTGAGGAGAGCCAGCGGCTTATTGGACA...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCTCAGTGAAGCGGGTCTaGCCATCATCCATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: AAPQSPLDGWRGGGQPEGSVKRV*PSSMLK
Trigger: CTTCAGCATGGATGATGGCCAGACCCGCTTCACTGA...GCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCCGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTCCGCGGTTCAGCTGGTaGAACTCCACGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PACSNGAASTAGCRGSAGPRFSW*NSTSCS
Trigger: GCTGCAGCTCGTGGAGTTCCACCAGCTGAACCGCGG...ACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp GAGCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGCCAGTCCACGGCCTaGTCAGAGGGCCACCCGCGT +
Preference number: 4 (lower is better)
Translates to: ELGEGEGATQGLPLRRGVSQSTA*SEGHPR
Trigger: ACGCGGGTGGCCCTCTGACCAGGCCGTGGACTGGCT...GACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTCGGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCGCCCCAGAGTCCACTaGATGGGTGGAGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: LGLYKVWGVKPPGLPPLLRPRVH*MGGGAA
Trigger: CGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG...GAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGAGGAGAAAACTGGAGTaGCGGAACCCTCCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PHPVPCGRAPESTGWVEGRRKLE*RNPPAP
Trigger: AGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCT...CCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGGGGTCAGGAGTGGACTaGAGTGGGGGCTGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLGSGVD*SGGCFL
Trigger: TAGAAAACAGCCCCCACTCCAGTCCACTCCTGACCC...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCCGGGAGGGCAGTGCTTaGAAGGGGTTAGAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGREGSA*KGLEVD
Trigger: ATCTACTTCTAACCCCTTCCAAGCACTGCCCTCCCG...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394209.6
CDS-3UTR TCA 90 bp CGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGACCAAAGCTTCCGTCCTaGACCCCGCAGCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: RSSSRPLWPRPRVHWMGGPKLPS*TPQLQK
Trigger: TTTCTGCAGCTGCGGGGTTCAGGACGGAAGCTTTGG...TCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCGAAGCTTGTTGGGCTTaGCACAGAAACCGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGEACWA*HRNRSQ
Trigger: CTGACTTCGGTTTCTGTGTCAAGCCCAACAAGCTTC...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGAAGCTTGTTGGGCTTaGCACAGAAACCGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKAEACWA*HRNRSQ
Trigger: CTGACTTCGGTTTCTGTGTCAAGCCCAACAAGCTTC...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGCACCAGGGTATTATCTaGGGCACTTCTCAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLHQGII*GTSQGW
Trigger: CCACCCTTGAGAAGTGCCTCAGATAATACCCTGGTG...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAACACCAGGGTATTATCTaGGGCACTTCTCAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VAAPQSPLDGWRGGGQPEHQGII*GTSQGW
Trigger: CCACCCTTGAGAAGTGCCTCAGATAATACCCTGGTG...TTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGGCCCGGGGGTTCTCAATaGCACGCCCAGCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: LGEGEGATQGLPLRRGVRPGGSQ*HAQHGQ
Trigger: CTGGCCATGCTGGGCGTGTCATTGAGAACCCCCGGG...CCTGACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CAGTCCACGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCGCAGCAAGCACTGGCATGGGCAGGCTaGGGCGGTGGTTTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: QSTAWSEGHPRAAMAQQALAWAG*GGGLSS
Trigger: AGAAGACAAACCACCGCCTCAGCCTGCCCATGCCAG...TGCTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCGTGGACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR TCA 90 bp CTCGGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCGGTGGATGGCTGCACTaGGGCTCGTGCCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGLYKVWGVKPPGLPPLLGGWLH*GSCRRL
Trigger: CAGCCTCCGGCACGAGCCTCAGTGCAGCCATCCACC...GAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGACGGAGGCGGTGTTGCTaGGAAGGGCATACAATCTGG +
Preference number: 4 (lower is better)
Translates to: RSSSRPLWPRPRVHWMGGRRRCC*EGHTIW
Trigger: CCAGATTGTATGCCCTTCTCAGCAACACCGCCTCCG...TCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445327.6
CDS-3UTR GCA 90 bp CAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGGTCAGAGGGCCAAGCTGTGGCACCTGCTaGCACCTCCACAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: QPEGGLRHEPVHGLVRGPSCGTC*HLHRPA
Trigger: TGCAGGTCTGTGGAGGTGGCAGCAGGTGCCACAGCT...TGGCCCTCTGACCAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR GCA 90 bp CTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGCCTGAACCCCGCAGCTaGAGAAAGCCCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: LLIPSPVAAPQSPLDGWRPEPRS*RKPWIS
Trigger: TGAGATCCAGGGCTTTCTGCAGCTGCGGGGTTCAGG...CCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGACATCTGCCACGTACTaGAGGTGCCTCGGATCCTTA +
Preference number: 4 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLTSATY*RCLGSL
Trigger: TAAGGATCCGAGGCACCTGCAGTACGTGGCAGATGT...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGGGACTCGTTCACATCTaGCACGTACTGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: RPGQRATRVQQWRSKHGRGLVHI*HVLQVP
Trigger: AGGCACCTGCAGTACGTGGCAGATGTGAACGAGTCC...CCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR GCA 90 bp GGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTGGAACTCCACGAGCTGCATCCCGTAGAGCTTaGGGCCCTGCGTCACCACGT +
Preference number: 4 (lower is better)
Translates to: GAASTAGCRGSAGGTPRAASRRA*GPASPR
Trigger: ACGTGGTGACGCAGGGCCGCAAGCTCTACGGGATGC...AGCTCGTGGAGTTCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR GCA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTCTGCTCATCTTCACTaGAGAAGATCCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGSAHLH*RRSEAP
Trigger: AGGGGCTTCGGATCTTCTGCAGTGAAGATGAGCAGA...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGTCTGCTCATCTTCACTaGAGAAGATCCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGSAHLH*RRSEAP
Trigger: AGGGGCTTCGGATCTTCTGCAGTGAAGATGAGCAGA...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCCAGATGGCGAGACTGTaGCTGCTGGTAATTCTTGTA +
Preference number: 4 (lower is better)
Translates to: PCGRAPESTGWVEGRRAAQMARL*LLVILV
Trigger: TACAAGAATTACCAGCAGGCACAGTCTCGCCATCTG...GGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGGGGTGCGGTGGATGGCTaGACTGAGGCTCGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: LGEGEGATQGLPLRRGVRGAVDG*TEARAG
Trigger: TCCGGCACGAGCCTCAGTGCAGCCATCCACCGCACC...CCTGACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGTGGAACTCCACGAGCTaGAGCAGGTCAGTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: LLIPSPVAAPQSPLDGWRWNSTS*SRSVKR
Trigger: CCGCTTCACTGACCTGCTGCAGCTCGTGGAGTTCCA...CCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGTGGAACTCCACGAGCTaGAGCAGGTCAGTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: APHPVPCGRAPESTGWVEWNSTS*SRSVKR
Trigger: CCGCTTCACTGACCTGCTGCAGCTCGTGGAGTTCCA...CTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CTAGGTGGGGGTGGCACTCCACCAGCCCCCAGGTCTCGTCGCTCAAGGCGTGAGAGCTGTGGCACCTGCTaGCACCTCCACAGACCTCCT +
Preference number: 4 (lower is better)
Translates to: LGGGGTPPAPRSRRSRRESCGTC*HLHRPP
Trigger: AGGAGGTCTGTGGAGGTGGCAGCAGGTGCCACAGCT...CTCACGCCTTGAGCGACGAGACCTGGGGGCTGGTGGAGTGCCACCCCCACCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS-3UTR CCA 90 bp CTAGGTGGGGGTGGCACTCCACCAGCCCCCAGGTCTCGTCGCTCAAGGCGTGAGACCCGTTCCGAAGTCTaGCTCCGTCTAGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: LGGGGTPPAPRSRRSRRETRSEV*LRLGTP
Trigger: GGGGGTTCCTAGACGGAGCCAGACTTCGGAACGGGT...CTCACGCCTTGAGCGACGAGACCTGGGGGCTGGTGGAGTGCCACCCCCACCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS-3UTR CCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGCTGCTAAGATGAGGTaGAGACAGATCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPAAKMR*RQIQLH
Trigger: ATGGAGCTGGATCTGTCTCCACCTCATCTTAGCAGC...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGAGCATTTCACACACGTaGCGAGCTGTGGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: LPLLIPSPVAAPQSPLDGSISHT*RAVAPA
Trigger: AGCAGGTGCCACAGCTCGCCACGTGTGTGAAATGCT...CCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGAGCATTTCACACACGTaGCGAGCTGTGGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: PHPVPCGRAPESTGWVEGSISHT*RAVAPA
Trigger: AGCAGGTGCCACAGCTCGCCACGTGTGTGAAATGCT...CCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGCGCTCCAGTGCTAGGTaGGGGTGGCACTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: ARRRRGGHPRPSLEERGQRSSAR*GWHSTS
Trigger: GCTGGTGGAGTGCCACCCCCACCTAGCACTGGAGCG...CTGACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCCAGGCAGCCTGCACTTCCACCACGGACTCGTGGTCCTCCAAACCCCGCTCCATCCACCACGGACTCGTaGTCCTCCAAACCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: ARQPALPPRTRGPPNPAPSTTDS*SSKPRS
Trigger: GGAGCGGGGTTTGGAGGACCACGAGTCCGTGGTGGA...TGGAGCGGGGTTTGGAGGACCACGAGTCCGTGGTGGAAGTGCAGGCTGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS-3UTR CCA 90 bp TGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGTGGGAACAGGGAGTGTaGGGAGCTCTTGAACAGTTC +
Preference number: 4 (lower is better)
Translates to: WPRPRVHWMGGGAAGSLKWEQGV*GALEQF
Trigger: GAACTGTTCAAGAGCTCCCCACACTCCCTGTTCCCA...CTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAATGGGAACAGGGAGTGTaGGGAGCTCTTGAACAGTTC +
Preference number: 4 (lower is better)
Translates to: VAAPQSPLDGWRGGGQPEWEQGV*GALEQF
Trigger: GAACTGTTCAAGAGCTCCCCACACTCCCTGTTCCCA...TTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGTCACCACGTACACGTTaGACTCGTTCACATCTGCCA +
Preference number: 4 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKASPRTR*TRSHLP
Trigger: TGGCAGATGTGAACGAGTCCAACGTGTACGTGGTGA...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTCACCACGTACACGTTaGACTCGTTCACATCTGCCA +
Preference number: 4 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGSPRTR*TRSHLP
Trigger: TGGCAGATGTGAACGAGTCCAACGTGTACGTGGTGA...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGATCCGAAGCCCCTTGTaGCCATTTCGAAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGIRSPL*PFRSLL
Trigger: CAACAAGCTTCGAAATGGCCACAAGGGGCTTCGGAT...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCCACCCGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCATGACACGCCCAGCATaGCCAGAGAAGTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: ATRVQQWRSKHGRMPRFSMTRPA*PEKSMA
Trigger: GGCCATGGACTTCTCTGGCCATGCTGGGCGTGTCAT...GCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp GTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAATCAGTGAAGCGGGTCTaGCCATCATCCATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VAAPQSPLDGWRGGGQPESVKRV*PSSMLK
Trigger: CTTCAGCATGGATGATGGCCAGACCCGCTTCACTGA...TTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp AGGCATGAGCCAGTCCACGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCATGCCGCGGTTCAGCTaGTGGAACTCCACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RHEPVHGLVRGPPACSNGMPRFS*WNSTSC
Trigger: GCAGCTCGTGGAGTTCCACCAGCTGAACCGCGGCAT...GCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCGTGGACTGGCTCATGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp GAAGCGGGTCTGGCCATCATCCATGCTGAAGTACAGGCGGCCCTCCTCCTCGCTAGTCCACTGGATGGGTaGAGGGGCGGCGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: EAGLAIIHAEVQAALLLASPLDG*RGGGQP
Trigger: AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACT...AGCGAGGAGGAGGGCCGCCTGTACTTCAGCATGGATGATGGCCAGACCCGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp AGCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTTCATCCCGTCCCCTGTaGCCGCGCCCCAGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SRGENWSGGTLPLLIPSPSSRPL*PRPRVH
Trigger: GTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGA...AGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp AGCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGGGCGTGAAACCGCCTaGGCTGCCCCCACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SRGENWSGGTLPLLIPSPGRETA*AAPTSP
Trigger: GGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCC...AGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGTCTGTACAAAGTGTaGGGCGTGAAACCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: APHPVPCGRAPESTGWVEGLYKV*GVKPPG
Trigger: CCCAGGCGGTTTCACGCCCCACACTTTGTACAGACC...CTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCACAGAGCAGATCAACTaGCCTCTCGGTCTGTACAAA +
Preference number: 4 (lower is better)
Translates to: PCGRAPESTGWVEGRRAATEQIN*PLGLYK
Trigger: TTTGTACAGACCGAGAGGCCAGTTGATCTGCTCTGT...GGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
3UTR CAA 72 bp CTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTaGAGGAGAGGGGTCAGGAGTGGACTGGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LGEGEGATQGLP*RRGVRSGLEWG
Trigger: CCCCCACTCCAGTCCACTCCTGACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGAGTGTGGGGAGCTCTTaGACAGTTCGTACTTGGCGA +
Preference number: 4 (lower is better)
Translates to: PHPVPCGRAPESTGWVEGSVGSS*TVRTWR
Trigger: TCGCCAAGTACGAACTGTTCAAGAGCTCCCCACACT...CCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTGGCCAAAGCTTCCGTCCTaGACCCCGCAGCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: RVQQWRSKHGRMPRFSWWPKLPS*TPQLQK
Trigger: TTTCTGCAGCTGCGGGGTTCAGGACGGAAGCTTTGG...CCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR TCA 90 bp TGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGAAGCTTGTTGGGCTTaGCACAGAAACCGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: WPRPRVHWMGGGAAGSLKEACWA*HRNRSQ
Trigger: CTGACTTCGGTTTCTGTGTCAAGCCCAACAAGCTTC...CTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAACCTCGCTCGGCAGGATaGGATAATGCTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: VAAPQSPLDGWRGGGQPEPRSAG*DNASLS
Trigger: AGAAAGTGAAGCATTATCTCATCCTGCCGAGCGAGG...TTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp TGGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTAGAGCAGCACCTCCAGAGAGGCGGGCTGAGGCATaGGCCAGTCCACGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: WAAPTSPIIPCPRAAPPERRAEA*ASPRPG
Trigger: ACCAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCT...CTCTGGAGGTGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CGGAAGACGAAGCGGCTATCTCCGCCCACGGGCCAGGCAGCCTGCACTTCCACCACGGAACCAGTTGTGTaGCCTTGTCCTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RKTKRLSPPTGQAACTSTTEPVV*PCPGGA
Trigger: GGCTCCTCCAGGACAAGGGCACACAACTGGTTCCGT...GGTGGAAGTGCAGGCTGCCTGGCCCGTGGGCGGAGATAGCCGCTTCGTCTTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS-3UTR GCA 90 bp AGCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTACGGGCCAGGCAGCCTaGACTTCCACCACGGACTCG +
Preference number: 4 (lower is better)
Translates to: SRGENWSGGTLPLLIPSPTGQAA*TSTTDS
Trigger: CGAGTCCGTGGTGGAAGTGCAGGCTGCCTGGCCCGT...AGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CTTGGCGAAGTTTTTCCGGAAGACGAAGCGGCTATCTCCGCCCACGGGCCAGGCACGGGCCAGGCAGCCTaGACTTCCACCACGGACTCG +
Preference number: 4 (lower is better)
Translates to: LGEVFPEDEAAISAHGPGTGQAA*TSTTDS
Trigger: CGAGTCCGTGGTGGAAGTGCAGGCTGCCTGGCCCGT...GCCTGGCCCGTGGGCGGAGATAGCCGCTTCGTCTTCCGGAAAAACTTCGCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS-3UTR GCA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGGGATATACCAGTGTGTaGATCGAGACAGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLGYTSV*IETAGD
Trigger: GTCTCCAGCTGTCTCGATGCACACACTGGTATATCC...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGATCTCAGGAAAGCTaGCAGCATTCAGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKAGSQES*QHSGSS
Trigger: AGAACTTCCTGAATGCTGGCAGCTTTCCTGAGATCC...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCGGATCTCAGGAAAGCTaGCAGCATTCAGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGGSQES*QHSGSS
Trigger: AGAACTTCCTGAATGCTGGCAGCTTTCCTGAGATCC...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CAGTCCACGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCGCAGCAAGCAGCCACGTACTGCAGGTaGCTCGGATCCTTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: QSTAWSEGHPRAAMAQQAATYCR*LGSLEV
Trigger: CACCTCTAAGGATCCGAGGCACCTGCAGTACGTGGC...TGCTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCGTGGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR GCA 90 bp CCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGACATCTGCCACGTACTaGAGGTGCCTCGGATCCTTA +
Preference number: 4 (lower is better)
Translates to: PHPVPCGRAPESTGWVEGTSATY*RCLGSL
Trigger: TAAGGATCCGAGGCACCTGCAGTACGTGGCAGATGT...CCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGGCATCCCGTAGAGCTTaGGGCCCTGCGTCACCACGT +
Preference number: 4 (lower is better)
Translates to: ARRRRGGHPRPSLEERGQASRRA*GPASPR
Trigger: ACGTGGTGACGCAGGGCCGCAAGCTCTACGGGATGC...CTGACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGTCTGCTCATCTTCACTaGAGAAGATCCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLSAHLH*RRSEAP
Trigger: AGGGGCTTCGGATCTTCTGCAGTGAAGATGAGCAGA...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTCAGATGGCGAGACTGTaGCTGCTGGTAATTCTTGTA +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPQMARL*LLVILV
Trigger: TACAAGAATTACCAGCAGGCACAGTCTCGCCATCTG...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCAGGTGCGGTGGATGGCTaGACTGAGGCTCGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: GLYKVWGVKPPGLPPLLPGAVDG*TEARAG
Trigger: TCCGGCACGAGCCTCAGTGCAGCCATCCACCGCACC...TGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GAGCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCGCAAGCACGGCAGGATaGCGCGGTTCAGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: ELGEGEGATQGLPLRRGVASTAG*RGSAGG
Trigger: TCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGC...GACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAATTCGGGAGGGCAGTaGTTGGAAGGGGTTAGAAGT +
Preference number: 4 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLNSGGQ*LEGVRS
Trigger: ACTTCTAACCCCTTCCAAGCACTGCCCTCCCGAATT...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394209.6
CDS-3UTR CCA 90 bp CAGTCCACGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCGCAGCAAGCATACACCTTTACTACATaGGGGCGGCTGGCATCGCGG +
Preference number: 4 (lower is better)
Translates to: QSTAWSEGHPRAAMAQQAYTFTT*GRLASR
Trigger: CCGCGATGCCAGCCGCCCCCATGTAGTAAAGGTGTA...TGCTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCGTGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp AGCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTAGTGCTAGGTGGGGGTaGCACTCCACCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SRGENWSGGTLPLLIPSPSARWG*HSTSPQ
Trigger: CTGGGGGCTGGTGGAGTGCCACCCCCACCTAGCACT...AGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCGCATTCAGGAAGTTCTaGATGAGGTCTTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: PCGRAPESTGWVEGRRAAAFRKF*MRSSWD
Trigger: ATCCCATGAAGACCTCATCCAGAACTTCCTGAATGC...GGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp TGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGATCCGAAGCCCCTTGTaGCCATTTCGAAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: WPRPRVHWMGGGAAGSLKIRSPL*PFRSLL
Trigger: CAACAAGCTTCGAAATGGCCACAAGGGGCTTCGGAT...CTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGATCCGAAGCCCCTTGTaGCCATTTCGAAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLIRSPL*PFRSLL
Trigger: CAACAAGCTTCGAAATGGCCACAAGGGGCTTCGGAT...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp AGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCCCGTGGAACCAGAGTTaGGTGCGGTGGATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RKLEWRNPPAPHPVPCGRPWNQS*VRWMAA
Trigger: TGCAGCCATCCACCGCACCCAACTCTGGTTCCACGG...GCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGCCGCGGTTCAGCTGGTaGAACTCCACGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AEEKTGVAEPSRSSSRPLPRFSW*NSTSCS
Trigger: GCTGCAGCTCGTGGAGTTCCACCAGCTGAACCGCGG...CAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp AGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCATGCCGCGGTTCAGCTaGTGGAACTCCACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RKLEWRNPPAPHPVPCGRMPRFS*WNSTSC
Trigger: GCAGCTCGTGGAGTTCCACCAGCTGAACCGCGGCAT...GCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGTCAGGAGTGGACTaGAGTGGGGGCTGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: APHPVPCGRAPESTGWVEGSGVD*SGGCFL
Trigger: TAGAAAACAGCCCCCACTCCAGTCCACTCCTGACCC...CTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGACAGAGCAGATCAACTaGCCTCTCGGTCTGTACAAA +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLTEQIN*PLGLYK
Trigger: TTTGTACAGACCGAGAGGCCAGTTGATCTGCTCTGT...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTACAGAGCAGATCAACTaGCCTCTCGGTCTGTACAAA +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPTEQIN*PLGLYK
Trigger: TTTGTACAGACCGAGAGGCCAGTTGATCTGCTCTGT...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCAATCACATTAGAGCCTaGCCTCAGAGATCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: AAPQSPLDGWRGGGQPEGNHIRA*PQRSER
Trigger: CCTCTCTGATCTCTGAGGCCAGGCTCTAATGTGATT...GCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394209.6
CDS-3UTR TCA 90 bp GCGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTGGAGAGAATTGGGCTCTGTaGGGGAGGACTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: ACSNGAASTAGCRGSAGGENWAL*GRTAEL
Trigger: GAGCTCTGCAGTCCTCCCTCACAGAGCCCAATTCTC...TCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR TCA 90 bp GAGCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCTCGTCGCTCAAGGCGTaGGCTCGCTGCACCAGCATT +
Preference number: 4 (lower is better)
Translates to: ELGEGEGATQGLPLRRGVSSLKA*ARCTSI
Trigger: AATGCTGGTGCAGCGAGCTCACGCCTTGAGCGACGA...GACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGTCAGGAAGTTCTGGATaGGGTCTTCATGGGATATAC +
Preference number: 4 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKASGSSG*GLHGIY
Trigger: GTATATCCCATGAAGACCTCATCCAGAACTTCCTGA...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGTCAGGAAGTTCTGGATaGGGTCTTCATGGGATATAC +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLSGSSG*GLHGIY
Trigger: GTATATCCCATGAAGACCTCATCCAGAACTTCCTGA...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGGAAGCTTGTTGGGCTTaGCACAGAAACCGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: PHPVPCGRAPESTGWVEGEACWA*HRNRSQ
Trigger: CTGACTTCGGTTTCTGTGTCAAGCCCAACAAGCTTC...CCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGCTGGCATGGGCAGGCTaGGGCGGTGGTTTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: AEEKTGVAEPSRSSSRPLLAWAG*GGGLSS
Trigger: AGAAGACAAACCACCGCCTCAGCCTGCCCATGCCAG...CAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGCCTCGCTCGGCAGGATaGGATAATGCTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: RPGQRATRVQQWRSKHGRPRSAG*DNASLS
Trigger: AGAAAGTGAAGCATTATCTCATCCTGCCGAGCGAGG...CCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR TCA 90 bp CTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGGGCTGCAGCAGGTCAGTaGAGCGGGTCTGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: LGEGEGATQGLPLRRGVRAAAGQ*SGSGHH
Trigger: ATGATGGCCAGACCCGCTTCACTGACCTGCTGCAGC...CCTGACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTGGAACCACCTCCACAGACCTaGAGGCCCCATCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: RAAMAQQARQDAAVQLVEPPPQT*RPHPHC
Trigger: ACAGTGAGGATGGGGCCTGCAGGTCTGTGGAGGTGG...TTCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR GCA 90 bp GTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGATCTCAGGAAAGCTaGCAGCATTCAGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: VAAPQSPLDGWRGGGQPEGSQES*QHSGSS
Trigger: AGAACTTCCTGAATGCTGGCAGCTTTCCTGAGATCC...TTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp AGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCCCTGAACCCCGCAGCTaGAGAAAGCCCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: RKLEWRNPPAPHPVPCGRPEPRS*RKPWIS
Trigger: TGAGATCCAGGGCTTTCTGCAGCTGCGGGGTTCAGG...GCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GCCACCCGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCACATCTGCCACGTACTaGAGGTGCCTCGGATCCTTA +
Preference number: 4 (lower is better)
Translates to: ATRVQQWRSKHGRMPRFSTSATY*RCLGSL
Trigger: TAAGGATCCGAGGCACCTGCAGTACGTGGCAGATGT...GCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR GCA 90 bp CTCGGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCGCATCCCGTAGAGCTTaGGGCCCTGCGTCACCACGT +
Preference number: 4 (lower is better)
Translates to: LGLYKVWGVKPPGLPPLLASRRA*GPASPR
Trigger: ACGTGGTGACGCAGGGCCGCAAGCTCTACGGGATGC...GAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp AGCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTAGGGGTCCCAGGGGCTaGGCAAAGGTCTTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: SRGENWSGGTLPLLIPSPRGPRG*AKVFRR
Trigger: TCTCCGGAAGACCTTTGCCCAGCCCCTGGGACCCCT...AGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CGAAGTTTTTCCGGAAGACGAAGCGGCTATCTCCGCCCACGGGCCAGGCAGCCTAGGGGTCCCAGGGGCTaGGCAAAGGTCTTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: RSFSGRRSGYLRPRARQPRGPRG*AKVFRR
Trigger: TCTCCGGAAGACCTTTGCCCAGCCCCTGGGACCCCT...AGGCTGCCTGGCCCGTGGGCGGAGATAGCCGCTTCGTCTTCCGGAAAAACTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS-3UTR CCA 90 bp CCCGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTGGGATGAGGAGAGGCTaGGACCTCTTTACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PACSNGAASTAGCRGSAGGMRRG*DLFTSS
Trigger: TGAGGAGGTAAAGAGGTCCCAGCCTCTCCTCATCCC...ACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp AGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCTTTCCTGCCGGTGGTTaGGATGAGGAGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RKLEWRNPPAPHPVPCGRFPAGG*DEERLG
Trigger: TCCCAGCCTCTCCTCATCCCAACCACCGGCAGGAAA...GCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp TGGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTAGAGCAGCACCTCCAGAGCGCTCCAGTGCTAGGTaGGGGTGGCACTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: WAAPTSPIIPCPRAAPPERSSAR*GWHSTS
Trigger: GCTGGTGGAGTGCCACCCCCACCTAGCACTGGAGCG...CTCTGGAGGTGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTCTCGGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTTCCACCACGGACTCGTaGTCCTCCAAACCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PLGLYKVWGVKPPGLPPLSTTDS*SSKPRS
Trigger: GGAGCGGGGTTTGGAGGACCACGAGTCCGTGGTGGA...AAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGTGGGAACAGGGAGTGTaGGGAGCTCTTGAACAGTTC +
Preference number: 4 (lower is better)
Translates to: LLIPSPVAAPQSPLDGWRWEQGV*GALEQF
Trigger: GAACTGTTCAAGAGCTCCCCACACTCCCTGTTCCCA...CCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGGCATTCAGGAAGTTCTaGATGAGGTCTTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGAFRKF*MRSSWD
Trigger: ATCCCATGAAGACCTCATCCAGAACTTCCTGAATGC...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGCATTCAGGAAGTTCTaGATGAGGTCTTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: AAPQSPLDGWRGGGQPEGAFRKF*MRSSWD
Trigger: ATCCCATGAAGACCTCATCCAGAACTTCCTGAATGC...GCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGCATTCAGGAAGTTCTaGATGAGGTCTTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPAFRKF*MRSSWD
Trigger: ATCCCATGAAGACCTCATCCAGAACTTCCTGAATGC...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGAGCCCAAACAAGATaGATGCAGATGGCGAGACTG +
Preference number: 4 (lower is better)
Translates to: LLIPSPVAAPQSPLDGWRGAQTR*MQMARL
Trigger: CAGTCTCGCCATCTGCATCCATCTTGTTTGGGCTCC...CCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTGGAACTCCACGAGCTGGCAGGCTGAGGCGGTaGTTTGTCTTCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GAASTAGCRGSAGGTPRAGRLRR*FVFFLQ
Trigger: CTGGAGGAAGAAGACAAACCACCGCCTCAGCCTGCC...AGCTCGTGGAGTTCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp CTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGGCAGAGTTGGGTGCGGTaGATGGCTGCACTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LGEGEGATQGLPLRRGVRQSWVR*MAALRL
Trigger: GAGCCTCAGTGCAGCCATCCACCGCACCCAACTCTG...CCTGACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGCCGTGGAACCAGAGTTaGGTGCGGTGGATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: ARRRRGGHPRPSLEERGQPWNQS*VRWMAA
Trigger: TGCAGCCATCCACCGCACCCAACTCTGGTTCCACGG...CTGACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTTCACTTTCTGCAGGTaGCACAAAGAGAGGACAAAG +
Preference number: 4 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGFTFCR*HKERTK
Trigger: CTTTGTCCTCTCTTTGTGCCACCTGCAGAAAGTGAA...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGTTCACTTTCTGCAGGTaGCACAAAGAGAGGACAAAG +
Preference number: 4 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLFTFCR*HKERTK
Trigger: CTTTGTCCTCTCTTTGTGCCACCTGCAGAAAGTGAA...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCCAGTCCACGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCGCAGCAAGTCAGTGAAGCGGGTCTaGCCATCATCCATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ASPRPGQRATRVQQWRSKSVKRV*PSSMLK
Trigger: CTTCAGCATGGATGATGGCCAGACCCGCTTCACTGA...CTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCGTGGACTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR TCA 90 bp AGAGCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTTCGTCGCTCAAGGCGTaGGCTCGCTGCACCAGCATT +
Preference number: 4 (lower is better)
Translates to: RARRRRGGHPRPSLEERGSSLKA*ARCTSI
Trigger: AATGCTGGTGCAGCGAGCTCACGCCTTGAGCGACGA...ACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CTTGGCGAAGTTTTTCCGGAAGACGAAGCGGCTATCTCCGCCCACGGGCCAGGCTCGTCGCTCAAGGCGTaGGCTCGCTGCACCAGCATT +
Preference number: 4 (lower is better)
Translates to: LGEVFPEDEAAISAHGPGSSLKA*ARCTSI
Trigger: AATGCTGGTGCAGCGAGCTCACGCCTTGAGCGACGA...GCCTGGCCCGTGGGCGGAGATAGCCGCTTCGTCTTCCGGAAAAACTTCGCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS-3UTR TCA 90 bp GCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGCCTCGCTCGGCAGGATaGGATAATGCTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: APHPVPCGRAPESTGWVEPRSAG*DNASLS
Trigger: AGAAAGTGAAGCATTATCTCATCCTGCCGAGCGAGG...CTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp AGAGCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTGGCCATCATCCATGCTaGAGTACAGGCGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RARRRRGGHPRPSLEERGGHHPC*STGGPP
Trigger: AGGAGGGCCGCCTGTACTTCAGCATGGATGATGGCC...ACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCTGTTTTCTATCTaGGGGAGGCAAAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: APHPVPCGRAPESTGWVEGLFSI*GRQRSR
Trigger: TCTGCTTCTTTGCCTCCCTCAGATAGAAAACAGCCC...CTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp ATTCCCTGCCCTAGAGCAGCACCTCCAGAGCTAGGAGAAGGAGAGGGGGCCACCAGCTGTGGCACCTGCTaGCACCTCCACAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: IPCPRAAPPELGEGEGATSCGTC*HLHRPA
Trigger: TGCAGGTCTGTGGAGGTGGCAGCAGGTGCCACAGCT...GGTGGCCCCCTCTCCTTCTCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGATATACCAGTGTGTaGATCGAGACAGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LLIPSPVAAPQSPLDGWRGYTSV*IETAGD
Trigger: GTCTCCAGCTGTCTCGATGCACACACTGGTATATCC...CCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp AGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCTCTCCTCACGGGAAATaGGCCCGTGGAACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: RKLEWRNPPAPHPVPCGRSPHGK*ARGTRV
Trigger: AACTCTGGTTCCACGGGCGCATTTCCCGTGAGGAGA...GCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGATCCCTCTCCTTCACTaGCCTCCAAAGTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: AEEKTGVAEPSRSSSRPLIPLLH*PPKWRG
Trigger: CCCCCTCCACTTTGGAGGGCAGTGAAGGAGAGGGAT...CAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445327.6
CDS-3UTR CCA 90 bp CTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGCTGCTAAGATGAGGTaGAGACAGATCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LLIPSPVAAPQSPLDGWRAAKMR*RQIQLH
Trigger: ATGGAGCTGGATCTGTCTCCACCTCATCTTAGCAGC...CCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp AGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCGGGATGAGGAGAGGCTaGGACCTCTTTACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RKLEWRNPPAPHPVPCGRGMRRG*DLFTSS
Trigger: TGAGGAGGTAAAGAGGTCCCAGCCTCTCCTCATCCC...GCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGTGGATGAGGTCTTCATaGGATATACCAGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLWMRSS*DIPVCA
Trigger: TGCACACACTGGTATATCCCATGAAGACCTCATCCA...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CATGAGCCAGTCCACGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCGCAGGAGCCCAAACAAGATaGATGCAGATGGCGAGACTG +
Preference number: 4 (lower is better)
Translates to: HEPVHGLVRGPPACSNGAGAQTR*MQMARL
Trigger: CAGTCTCGCCATCTGCATCCATCTTGTTTGGGCTCC...TGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCGTGGACTGGCTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp GTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTGGCAGGCTGAGGCGGTaGTTTGTCTTCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VGRETAWAAPTSPIIPCPGRLRR*FVFFLQ
Trigger: CTGGAGGAAGAAGACAAACCACCGCCTCAGCCTGCC...AGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCACAGAGTTGGGTGCGGTaGATGGCTGCACTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GLYKVWGVKPPGLPPLLPQSWVR*MAALRL
Trigger: GAGCCTCAGTGCAGCCATCCACCGCACCCAACTCTG...TGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp TGCAGCAGGTCAGTGAAGCGGGTCTGGCCATCATCCATGCTGAAGTACAGGCGGACCCGCGTGCAGCAATaGCGCAGCAAGCACGGCAGG +
Preference number: 4 (lower is better)
Translates to: CSRSVKRVWPSSMLKYRRTRVQQ*RSKHGR
Trigger: CCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGGT...CCGCCTGTACTTCAGCATGGATGATGGCCAGACCCGCTTCACTGACCTGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp CTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGGAAGGGCATACAATCTaGAGAGATGAAGCCTCGACA +
Preference number: 4 (lower is better)
Translates to: LPLLIPSPVAAPQSPLDGEGHTI*RDEAST
Trigger: TGTCGAGGCTTCATCTCTCCAGATTGTATGCCCTTC...CCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445327.6
CDS-3UTR TCA 90 bp CGAAGTTTTTCCGGAAGACGAAGCGGCTATCTCCGCCCACGGGCCAGGCAGCCTCAGCTCCATGGCGTCTaGGCAAGAGAGGGGCTTAAC +
Preference number: 4 (lower is better)
Translates to: RSFSGRRSGYLRPRARQPQLHGV*AREGLN
Trigger: GTTAAGCCCCTCTCTTGCTCAGACGCCATGGAGCTG...AGGCTGCCTGGCCCGTGGGCGGAGATAGCCGCTTCGTCTTCCGGAAAAACTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS-3UTR TCA 90 bp AGGCAGCCTGCACTTCCACCACGGACTCGTGGTCCTCCAAACCCCGCTCCAGTGGGAGAGCTGCTAAGATaGGGTGGAGACAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: RQPALPPRTRGPPNPAPVGELLR*GGDRSS
Trigger: GCTGGATCTGTCTCCACCTCATCTTAGCAGCTCTCC...CACTGGAGCGGGGTTTGGAGGACCACGAGTCCGTGGTGGAAGTGCAGGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS-3UTR TCA 90 bp CAGCAGGTCAGTGAAGCGGGTCTGGCCATCATCCATGCTGAAGTACAGGCGGCCTCGTCGCTCAAGGCGTaGGCTCGCTGCACCAGCATT +
Preference number: 4 (lower is better)
Translates to: QQVSEAGLAIIHAEVQAASSLKA*ARCTSI
Trigger: AATGCTGGTGCAGCGAGCTCACGCCTTGAGCGACGA...GGCCGCCTGTACTTCAGCATGGATGATGGCCAGACCCGCTTCACTGACCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR TCA 90 bp AGCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTCCAAAGCTTCCGTCCTaGACCCCGCAGCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SRGENWSGGTLPLLIPSPPKLPS*TPQLQK
Trigger: TTTCTGCAGCTGCGGGGTTCAGGACGGAAGCTTTGG...AGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp TGGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTAGAGCAGCACCTCCAGAGCCACCTCCACAGACCTaGAGGCCCCATCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: WAAPTSPIIPCPRAAPPEPPPQT*RPHPHC
Trigger: ACAGTGAGGATGGGGCCTGCAGGTCTGTGGAGGTGG...CTCTGGAGGTGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp AGGCATGAGCCAGTCCACGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCGGATATACCAGTGTGTaGATCGAGACAGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: RHEPVHGLVRGPPACSNGGYTSV*IETAGD
Trigger: GTCTCCAGCTGTCTCGATGCACACACTGGTATATCC...GCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCGTGGACTGGCTCATGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR GCA 90 bp AGCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTCCTGAACCCCGCAGCTaGAGAAAGCCCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: SRGENWSGGTLPLLIPSPPEPRS*RKPWIS
Trigger: TGAGATCCAGGGCTTTCTGCAGCTGCGGGGTTCAGG...AGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCTCTCGGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTGCCACGTACTGCAGGTaGCTCGGATCCTTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PLGLYKVWGVKPPGLPPLATYCR*LGSLEV
Trigger: CACCTCTAAGGATCCGAGGCACCTGCAGTACGTGGC...AAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp AGCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGCCACGTACTGCAGGTaGCTCGGATCCTTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SRGENWSGGTLPLLIPSPATYCR*LGSLEV
Trigger: CACCTCTAAGGATCCGAGGCACCTGCAGTACGTGGC...AGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGGGGACTCGTTCACATCTaGCACGTACTGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LGEGEGATQGLPLRRGVRGLVHI*HVLQVP
Trigger: AGGCACCTGCAGTACGTGGCAGATGTGAACGAGTCC...CCTGACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GAGCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCCAGCAGGTGCGGCTCTaGTCATCTTCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ELGEGEGATQGLPLRRGVQQVRL*SSSLQK
Trigger: CTTCTGCAGTGAAGATGAGCAGAGCCGCACCTGCTG...GACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp TGGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTAGAGCAGCACCTCCAGAGCAGCCAGCCAGCAGGTaGGGCTCTGCTCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: WAAPTSPIIPCPRAAPPEQPASR*GSAHLH
Trigger: GTGAAGATGAGCAGAGCCGCACCTGCTGGCTGGCTG...CTCTGGAGGTGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGACAGATGGCGAGACTGTaGCTGCTGGTAATTCTTGTA +
Preference number: 4 (lower is better)
Translates to: RSSSRPLWPRPRVHWMGGQMARL*LLVILV
Trigger: TACAAGAATTACCAGCAGGCACAGTCTCGCCATCTG...TCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTTCTCCTCACGGGAAATaGGCCCGTGGAACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: VGRETAWAAPTSPIIPCPSPHGK*ARGTRV
Trigger: AACTCTGGTTCCACGGGCGCATTTCCCGTGAGGAGA...AGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTCTCCTCACGGGAAATaGGCCCGTGGAACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: AEEKTGVAEPSRSSSRPLSPHGK*ARGTRV
Trigger: AACTCTGGTTCCACGGGCGCATTTCCCGTGAGGAGA...CAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp CCTCTCGGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCCGTCTACCAAGCCCTaGTGTCCAATAAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PLGLYKVWGVKPPGLPPLPSTKP*CPISRW
Trigger: CCAGCGGCTTATTGGACAGCAGGGCTTGGTAGACGG...AAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCACCCGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGCTGCTAAGATGAGGTaGAGACAGATCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: PPACSNGAASTAGCRGSAAAKMR*RQIQLH
Trigger: ATGGAGCTGGATCTGTCTCCACCTCATCTTAGCAGC...AGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp GCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGGGGATGAGGAGAGGCTaGGACCTCTTTACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: AEEKTGVAEPSRSSSRPLGMRRG*DLFTSS
Trigger: TGAGGAGGTAAAGAGGTCCCAGCCTCTCCTCATCCC...CAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGTGGATGAGGTCTTCATaGGATATACCAGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: PHPVPCGRAPESTGWVEGWMRSS*DIPVCA
Trigger: TGCACACACTGGTATATCCCATGAAGACCTCATCCA...CCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTGGTCACCACGTACACGTTaGACTCGTTCACATCTGCCA +
Preference number: 4 (lower is better)
Translates to: RVQQWRSKHGRMPRFSWWSPRTR*TRSHLP
Trigger: TGGCAGATGTGAACGAGTCCAACGTGTACGTGGTGA...CCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp GGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTGGAACTCCACGAGCTAGAAACCGAAGTCAGTaGGCATCCCGTAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: GAASTAGCRGSAGGTPRARNRSQ*ASRRAC
Trigger: GCAAGCTCTACGGGATGCCCACTGACTTCGGTTTCT...AGCTCGTGGAGTTCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp AGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCAGAAACCGAAGTCAGTaGGCATCCCGTAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: RKLEWRNPPAPHPVPCGRRNRSQ*ASRRAC
Trigger: GCAAGCTCTACGGGATGCCCACTGACTTCGGTTTCT...GCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp AGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCGGAGCCCAAACAAGATaGATGCAGATGGCGAGACTG +
Preference number: 4 (lower is better)
Translates to: RKLEWRNPPAPHPVPCGRGAQTR*MQMARL
Trigger: CAGTCTCGCCATCTGCATCCATCTTGTTTGGGCTCC...GCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTCGGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCATGACACGCCCAGCATaGCCAGAGAAGTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: LGLYKVWGVKPPGLPPLLMTRPA*PEKSMA
Trigger: GGCCATGGACTTCTCTGGCCATGCTGGGCGTGTCAT...GAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGTTCACTTTCTGCAGGTaGCACAAAGAGAGGACAAAG +
Preference number: 4 (lower is better)
Translates to: RPGQRATRVQQWRSKHGRFTFCR*HKERTK
Trigger: CTTTGTCCTCTCTTTGTGCCACCTGCAGAAAGTGAA...CCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp CCTCTCGGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTAGGAGAAAACTGGAGTaGCGGAACCCTCCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PLGLYKVWGVKPPGLPPLRRKLE*RNPPAP
Trigger: AGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCT...AAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp AGAGCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTAGCAGAGGAGAAAACTaGAGTGGCGGAACCCTCCCG +
Preference number: 4 (lower is better)
Translates to: RARRRRGGHPRPSLEERGSRGEN*SGGTLP
Trigger: CGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCT...ACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp ATTCCCTGCCCTAGAGCAGCACCTCCAGAGCTAGGAGAAGGAGAGGGGGCCACCAGCAGAGGAGAAAACTaGAGTGGCGGAACCCTCCCG +
Preference number: 4 (lower is better)
Translates to: IPCPRAAPPELGEGEGATSRGEN*SGGTLP
Trigger: CGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCT...GGTGGCCCCCTCTCCTTCTCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp ATTCCCTGCCCTAGAGCAGCACCTCCAGAGCTAGGAGAAGGAGAGGGGGCCACCGGAGAGCTGCTAAGATaGGGTGGAGACAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: IPCPRAAPPELGEGEGATGELLR*GGDRSS
Trigger: GCTGGATCTGTCTCCACCTCATCTTAGCAGCTCTCC...GGTGGCCCCCTCTCCTTCTCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CAAGCACGGCAGGATGCCGCGGTTCAGCTGGTGGAACTCCACGAGCTGCAGCAGAGTGTGGGGAGCTCTTaGACAGTTCGTACTTGGCGA +
Preference number: 4 (lower is better)
Translates to: QARQDAAVQLVELHELQQSVGSS*TVRTWR
Trigger: TCGCCAAGTACGAACTGTTCAAGAGCTCCCCACACT...CTGCTGCAGCTCGTGGAGTTCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR TCA 90 bp GCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGAGTGTGGGGAGCTCTTaGACAGTTCGTACTTGGCGA +
Preference number: 4 (lower is better)
Translates to: AEEKTGVAEPSRSSSRPLSVGSS*TVRTWR
Trigger: TCGCCAAGTACGAACTGTTCAAGAGCTCCCCACACT...CAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CAAGCACGGCAGGATGCCGCGGTTCAGCTGGTGGAACTCCACGAGCTGCAGCAGCACCAGGGTATTATCTaGGGCACTTCTCAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: QARQDAAVQLVELHELQQHQGII*GTSQGW
Trigger: CCACCCTTGAGAAGTGCCTCAGATAATACCCTGGTG...CTGCTGCAGCTCGTGGAGTTCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR GCA 90 bp AGAGCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGCAGGTGCGGCTCTaGTCATCTTCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RARRRRGGHPRPSLEERGQQVRL*SSSLQK
Trigger: CTTCTGCAGTGAAGATGAGCAGAGCCGCACCTGCTG...ACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp AGCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTACAGATCCAGCTCCATaGCGTCTGAGCAAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SRGENWSGGTLPLLIPSPTDPAP*RLSKRG
Trigger: CCCTCTCTTGCTCAGACGCCATGGAGCTGGATCTGT...AGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCAAGCATTTCACACACGTaGCGAGCTGTGGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: GLYKVWGVKPPGLPPLLPSISHT*RAVAPA
Trigger: AGCAGGTGCCACAGCTCGCCACGTGTGTGAAATGCT...TGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CGAAGTTTTTCCGGAAGACGAAGCGGCTATCTCCGCCCACGGGCCAGGCAGCCTAGCATTTCACACACGTaGCGAGCTGTGGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: RSFSGRRSGYLRPRARQPSISHT*RAVAPA
Trigger: AGCAGGTGCCACAGCTCGCCACGTGTGTGAAATGCT...AGGCTGCCTGGCCCGTGGGCGGAGATAGCCGCTTCGTCTTCCGGAAAAACTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS-3UTR CCA 90 bp GAGTGGACTGGAGTGGGGGCTGTTTTCTATCTGAGGGAGGCAAAGAAGCAGAGGAGTGCTAGGTGGGGGTaGCACTCCACCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: EWTGVGAVFYLREAKKQRSARWG*HSTSPQ
Trigger: CTGGGGGCTGGTGGAGTGCCACCCCCACCTAGCACT...CCTCTGCTTCTTTGCCTCCCTCAGATAGAAAACAGCCCCCACTCCAGTCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGTGGGAACAGGGAGTGTaGGGAGCTCTTGAACAGTTC +
Preference number: 4 (lower is better)
Translates to: ARRRRGGHPRPSLEERGQWEQGV*GALEQF
Trigger: GAACTGTTCAAGAGCTCCCCACACTCCCTGTTCCCA...CTGACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGCATTCAGGAAGTTCTaGATGAGGTCTTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: LLIPSPVAAPQSPLDGWRAFRKF*MRSSWD
Trigger: ATCCCATGAAGACCTCATCCAGAACTTCCTGAATGC...CCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp ATTCCCTGCCCTAGAGCAGCACCTCCAGAGCTAGGAGAAGGAGAGGGGGCCACCGGCACTTCTCAAGGGTaGGGAGCCCAAACAAGATGG +
Preference number: 4 (lower is better)
Translates to: IPCPRAAPPELGEGEGATGTSQG*GAQTRW
Trigger: CCATCTTGTTTGGGCTCCCCACCCTTGAGAAGTGCC...GGTGGCCCCCTCTCCTTCTCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp TGGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTAGAGCAGCACCTCCAGAGGGCAGGCTGAGGCGGTaGTTTGTCTTCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: WAAPTSPIIPCPRAAPPEGRLRR*FVFFLQ
Trigger: CTGGAGGAAGAAGACAAACCACCGCCTCAGCCTGCC...CTCTGGAGGTGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGTCCAATAAGCCGCTaGCTCTCCTCACGGGAAATG +
Preference number: 4 (lower is better)
Translates to: AEEKTGVAEPSRSSSRPLCPISR*LSSREM
Trigger: CATTTCCCGTGAGGAGAGCCAGCGGCTTATTGGACA...CAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGGTCAGTGAAGCGGGTCTaGCCATCATCCATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LGEGEGATQGLPLRRGVRSVKRV*PSSMLK
Trigger: CTTCAGCATGGATGATGGCCAGACCCGCTTCACTGA...CCTGACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp TGCAGCAGGTCAGTGAAGCGGGTCTGGCCATCATCCATGCTGAAGTACAGGCGGCAGCTCCATGGCGTCTaGGCAAGAGAGGGGCTTAAC +
Preference number: 4 (lower is better)
Translates to: CSRSVKRVWPSSMLKYRRQLHGV*AREGLN
Trigger: GTTAAGCCCCTCTCTTGCTCAGACGCCATGGAGCTG...CCGCCTGTACTTCAGCATGGATGATGGCCAGACCCGCTTCACTGACCTGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR TCA 90 bp CCTCTCGGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCACCAGGGTATTATCTaGGGCACTTCTCAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PLGLYKVWGVKPPGLPPLHQGII*GTSQGW
Trigger: CCACCCTTGAGAAGTGCCTCAGATAATACCCTGGTG...AAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGGGGCTGTTTTCTATCTaGGGGAGGCAAAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: ARRRRGGHPRPSLEERGQGLFSI*GRQRSR
Trigger: TCTGCTTCTTTGCCTCCCTCAGATAGAAAACAGCCC...CTGACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTCTGCTCATCTTCACTaGAGAAGATCCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: AEEKTGVAEPSRSSSRPLSAHLH*RRSEAP
Trigger: AGGGGCTTCGGATCTTCTGCAGTGAAGATGAGCAGA...CAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp AGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCCAGATGGCGAGACTGTaGCTGCTGGTAATTCTTGTA +
Preference number: 4 (lower is better)
Translates to: RKLEWRNPPAPHPVPCGRQMARL*LLVILV
Trigger: TACAAGAATTACCAGCAGGCACAGTCTCGCCATCTG...GCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGAACCCCCAGATTCCTaGATTTTATTTCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: LLIPSPVAAPQSPLDGWREPPDS*ILFQIH
Trigger: GTGGATCTGAAATAAAATCCAGGAATCTGGGGGTTC...CCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000309156.9
CDS-3UTR CCA 90 bp GCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGGCTGCTAAGATGAGGTaGAGACAGATCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: AEEKTGVAEPSRSSSRPLAAKMR*RQIQLH
Trigger: ATGGAGCTGGATCTGTCTCCACCTCATCTTAGCAGC...CAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CAGGCAGCCTGCACTTCCACCACGGACTCGTGGTCCTCCAAACCCCGCTCCAGTGCTGCTAAGATGAGGTaGAGACAGATCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: QAACTSTTDSWSSKPRSSAAKMR*RQIQLH
Trigger: ATGGAGCTGGATCTGTCTCCACCTCATCTTAGCAGC...ACTGGAGCGGGGTTTGGAGGACCACGAGTCCGTGGTGGAAGTGCAGGCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS-3UTR CCA 90 bp GTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTTCACCACGTACACGTTaGACTCGTTCACATCTGCCA +
Preference number: 4 (lower is better)
Translates to: VGRETAWAAPTSPIIPCPSPRTR*TRSHLP
Trigger: TGGCAGATGTGAACGAGTCCAACGTGTACGTGGTGA...AGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTCTCGGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTAGAAACCGAAGTCAGTaGGCATCCCGTAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: PLGLYKVWGVKPPGLPPLRNRSQ*ASRRAC
Trigger: GCAAGCTCTACGGGATGCCCACTGACTTCGGTTTCT...AAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp ATTCCCTGCCCTAGAGCAGCACCTCCAGAGCTAGGAGAAGGAGAGGGGGCCACCAGAAACCGAAGTCAGTaGGCATCCCGTAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: IPCPRAAPPELGEGEGATRNRSQ*ASRRAC
Trigger: GCAAGCTCTACGGGATGCCCACTGACTTCGGTTTCT...GGTGGCCCCCTCTCCTTCTCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCTCTCGGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTTGTCCAATAAGCCGCTaGCTCTCCTCACGGGAAATG +
Preference number: 4 (lower is better)
Translates to: PLGLYKVWGVKPPGLPPLCPISR*LSSREM
Trigger: CATTTCCCGTGAGGAGAGCCAGCGGCTTATTGGACA...AAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp TGGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTAGAGCAGCACCTCCAGAGGGGTCAGGAGTGGACTaGAGTGGGGGCTGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: WAAPTSPIIPCPRAAPPEGSGVD*SGGCFL
Trigger: TAGAAAACAGCCCCCACTCCAGTCCACTCCTGACCC...CTCTGGAGGTGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GAGTGGACTGGAGTGGGGGCTGTTTTCTATCTGAGGGAGGCAAAGAAGCAGAGGGTCAGGACACCCGGCTaGGACCACGTCTTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: EWTGVGAVFYLREAKKQRVRTPG*DHVFRE
Trigger: CTCCCTGAAGACGTGGTCCCAGCCGGGTGTCCTGAC...CCTCTGCTTCTTTGCCTCCCTCAGATAGAAAACAGCCCCCACTCCAGTCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394211.7
CDS-3UTR TCA 90 bp AGCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGAAGCTTGTTGGGCTTaGCACAGAAACCGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: SRGENWSGGTLPLLIPSPEACWA*HRNRSQ
Trigger: CTGACTTCGGTTTCTGTGTCAAGCCCAACAAGCTTC...AGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp ATTCCCTGCCCTAGAGCAGCACCTCCAGAGCTAGGAGAAGGAGAGGGGGCCACCCCTCGCTCGGCAGGATaGGATAATGCTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: IPCPRAAPPELGEGEGATPRSAG*DNASLS
Trigger: AGAAAGTGAAGCATTATCTCATCCTGCCGAGCGAGG...GGTGGCCCCCTCTCCTTCTCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CTCGGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCTCGCTCGGCAGGATaGGATAATGCTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: LGLYKVWGVKPPGLPPLLPRSAG*DNASLS
Trigger: AGAAAGTGAAGCATTATCTCATCCTGCCGAGCGAGG...GAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCAGGGCTGTTTTCTATCTaGGGGAGGCAAAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GLYKVWGVKPPGLPPLLPGLFSI*GRQRSR
Trigger: TCTGCTTCTTTGCCTCCCTCAGATAGAAAACAGCCC...TGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp AGCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGGATATACCAGTGTGTaGATCGAGACAGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: SRGENWSGGTLPLLIPSPGYTSV*IETAGD
Trigger: GTCTCCAGCTGTCTCGATGCACACACTGGTATATCC...AGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CCGGAAGACGAAGCGGCTATCTCCGCCCACGGGCCAGGCAGCCTGCACTTCCACGAACCCCCAGATTCCTaGATTTTATTTCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: PEDEAAISAHGPGSLHFHEPPDS*ILFQIH
Trigger: GTGGATCTGAAATAAAATCCAGGAATCTGGGGGTTC...GTGGAAGTGCAGGCTGCCTGGCCCGTGGGCGGAGATAGCCGCTTCGTCTTCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS-3UTR CCA 90 bp ATTCCCTGCCCTAGAGCAGCACCTCCAGAGCTAGGAGAAGGAGAGGGGGCCACCGCTGCTAAGATGAGGTaGAGACAGATCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: IPCPRAAPPELGEGEGATAAKMR*RQIQLH
Trigger: ATGGAGCTGGATCTGTCTCCACCTCATCTTAGCAGC...GGTGGCCCCCTCTCCTTCTCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GAGTGGACTGGAGTGGGGGCTGTTTTCTATCTGAGGGAGGCAAAGAAGCAGAGGCAGCTCCATGGCGTCTaGGCAAGAGAGGGGCTTAAC +
Preference number: 4 (lower is better)
Translates to: EWTGVGAVFYLREAKKQRQLHGV*AREGLN
Trigger: GTTAAGCCCCTCTCTTGCTCAGACGCCATGGAGCTG...CCTCTGCTTCTTTGCCTCCCTCAGATAGAAAACAGCCCCCACTCCAGTCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp CTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCAGGTCAGGAAGTTCTGGATaGGGTCTTCATGGGATATAC +
Preference number: 4 (lower is better)
Translates to: LGEGEGATQGLPLRRGVRSGSSG*GLHGIY
Trigger: GTATATCCCATGAAGACCTCATCCAGAACTTCCTGA...CCTGACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp TGGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTAGAGCAGCACCTCCAGAGGGATATACCAGTGTGTaGATCGAGACAGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: WAAPTSPIIPCPRAAPPEGYTSV*IETAGD
Trigger: GTCTCCAGCTGTCTCGATGCACACACTGGTATATCC...CTCTGGAGGTGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GAGTGGACTGGAGTGGGGGCTGTTTTCTATCTGAGGGAGGCAAAGAAGCAGAGGGCCACGTACTGCAGGTaGCTCGGATCCTTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: EWTGVGAVFYLREAKKQRATYCR*LGSLEV
Trigger: CACCTCTAAGGATCCGAGGCACCTGCAGTACGTGGC...CCTCTGCTTCTTTGCCTCCCTCAGATAGAAAACAGCCCCCACTCCAGTCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp TGGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTAGAGCAGCACCTCCAGAGTCACCACGTACACGTTaGACTCGTTCACATCTGCCA +
Preference number: 4 (lower is better)
Translates to: WAAPTSPIIPCPRAAPPESPRTR*TRSHLP
Trigger: TGGCAGATGTGAACGAGTCCAACGTGTACGTGGTGA...CTCTGGAGGTGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTTTCACTTTCTGCAGGTaGCACAAAGAGAGGACAAAG +
Preference number: 4 (lower is better)
Translates to: VGRETAWAAPTSPIIPCPFTFCR*HKERTK
Trigger: CTTTGTCCTCTCTTTGTGCCACCTGCAGAAAGTGAA...AGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCCCCCACTTCTCCCATAATTCCCTGCCCTAGAGCAGCACCTCCAGAGCTAGGATCAGTGAAGCGGGTCTaGCCATCATCCATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: APTSPIIPCPRAAPPELGSVKRV*PSSMLK
Trigger: CTTCAGCATGGATGATGGCCAGACCCGCTTCACTGA...TCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GAAGCGGGTCTGGCCATCATCCATGCTGAAGTACAGGCGGCCCTCCTCCTCGCTTCAGGAAGTTCTGGATaGGGTCTTCATGGGATATAC +
Preference number: 4 (lower is better)
Translates to: EAGLAIIHAEVQAALLLASGSSG*GLHGIY
Trigger: GTATATCCCATGAAGACCTCATCCAGAACTTCCTGA...AGCGAGGAGGAGGGCCGCCTGTACTTCAGCATGGATGATGGCCAGACCCGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR GCA 90 bp TGGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTAGAGCAGCACCTCCAGAGCAGATGGCGAGACTGTaGCTGCTGGTAATTCTTGTA +
Preference number: 4 (lower is better)
Translates to: WAAPTSPIIPCPRAAPPEQMARL*LLVILV
Trigger: TACAAGAATTACCAGCAGGCACAGTCTCGCCATCTG...CTCTGGAGGTGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp AGCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTTGGATGAGGTCTTCATaGGATATACCAGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: SRGENWSGGTLPLLIPSPWMRSS*DIPVCA
Trigger: TGCACACACTGGTATATCCCATGAAGACCTCATCCA...AGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp GCCCCCACTTCTCCCATAATTCCCTGCCCTAGAGCAGCACCTCCAGAGCTAGGAATCCGAAGCCCCTTGTaGCCATTTCGAAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: APTSPIIPCPRAAPPELGIRSPL*PFRSLL
Trigger: CAACAAGCTTCGAAATGGCCACAAGGGGCTTCGGAT...TCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp ATTCCCTGCCCTAGAGCAGCACCTCCAGAGCTAGGAGAAGGAGAGGGGGCCACCTTCACTTTCTGCAGGTaGCACAAAGAGAGGACAAAG +
Preference number: 4 (lower is better)
Translates to: IPCPRAAPPELGEGEGATFTFCR*HKERTK
Trigger: CTTTGTCCTCTCTTTGTGCCACCTGCAGAAAGTGAA...GGTGGCCCCCTCTCCTTCTCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GAGTGGACTGGAGTGGGGGCTGTTTTCTATCTGAGGGAGGCAAAGAAGCAGAGGCACCAGGGTATTATCTaGGGCACTTCTCAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: EWTGVGAVFYLREAKKQRHQGII*GTSQGW
Trigger: CCACCCTTGAGAAGTGCCTCAGATAATACCCTGGTG...CCTCTGCTTCTTTGCCTCCCTCAGATAGAAAACAGCCCCCACTCCAGTCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCATACAATCTGGAGAGATaGAGCCTCGACAATTTAGAG +
Preference number: 4 (lower is better)
Translates to: GLYKVWGVKPPGLPPLLPYNLER*SLDNLE
Trigger: CTCTAAATTGTCGAGGCTTCATCTCTCCAGATTGTA...TGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445327.6
CDS-3UTR GCA 90 bp GCCCCCACTTCTCCCATAATTCCCTGCCCTAGAGCAGCACCTCCAGAGCTAGGAGGATCTCAGGAAAGCTaGCAGCATTCAGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: APTSPIIPCPRAAPPELGGSQES*QHSGSS
Trigger: AGAACTTCCTGAATGCTGGCAGCTTTCCTGAGATCC...TCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CCA 90 bp CAGCAGGTCAGTGAAGCGGGTCTGGCCATCATCCATGCTGAAGTACAGGCGGCCTGGATGAGGTCTTCATaGGATATACCAGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: QQVSEAGLAIIHAEVQAAWMRSS*DIPVCA
Trigger: TGCACACACTGGTATATCCCATGAAGACCTCATCCA...GGCCGCCTGTACTTCAGCATGGATGATGGCCAGACCCGCTTCACTGACCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CCA 90 bp GAGTGGACTGGAGTGGGGGCTGTTTTCTATCTGAGGGAGGCAAAGAAGCAGAGGATCCGAAGCCCCTTGTaGCCATTTCGAAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: EWTGVGAVFYLREAKKQRIRSPL*PFRSLL
Trigger: CAACAAGCTTCGAAATGGCCACAAGGGGCTTCGGAT...CCTCTGCTTCTTTGCCTCCCTCAGATAGAAAACAGCCCCCACTCCAGTCCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR GCA 90 bp GAGTGGACTGGAGTGGGGGCTGTTTTCTATCTGAGGGAGGCAAAGAAGCAGAGGGGATCTCAGGAAAGCTaGCAGCATTCAGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: EWTGVGAVFYLREAKKQRGSQES*QHSGSS
Trigger: AGAACTTCCTGAATGCTGGCAGCTTTCCTGAGATCC...CCTCTGCTTCTTTGCCTCCCTCAGATAGAAAACAGCCCCCACTCCAGTCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR TCA 90 bp GAGTGGACTGGAGTGGGGGCTGTTTTCTATCTGAGGGAGGCAAAGAAGCAGAGGTCAGGAAGTTCTGGATaGGGTCTTCATGGGATATAC +
Preference number: 4 (lower is better)
Translates to: EWTGVGAVFYLREAKKQRSGSSG*GLHGIY
Trigger: GTATATCCCATGAAGACCTCATCCAGAACTTCCTGA...CCTCTGCTTCTTTGCCTCCCTCAGATAGAAAACAGCCCCCACTCCAGTCCACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAGGGGCCCCCGAGAATaGGGCTCTGTGAGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLRGPRE*GSVRED
Trigger: GTCCTCCCTCACAGAGCCCAATTCTCGGGGGCCCCT...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCCCGTGGAACCAGAGTaGGGTGCGGTGGATGGCTGC +
Preference number: 5 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGPVEPE*GAVDGC
Trigger: GCAGCCATCCACCGCACCCAACTCTGGTTCCACGGG...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCCCCGTGGAACCAGAGTaGGGTGCGGTGGATGGCTGC +
Preference number: 5 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGPVEPE*GAVDGC
Trigger: GCAGCCATCCACCGCACCCAACTCTGGTTCCACGGG...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGAGGGGCCCCCGAGAATaGGGCTCTGTGAGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLRGPRE*GSVRED
Trigger: GTCCTCCCTCACAGAGCCCAATTCTCGGGGGCCCCT...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAGCTGCACCCCGTACTaGAAGAGGCGGAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLSCTPY*KRRKAA
Trigger: GGCTGCCTTCCGCCTCTTCAAGTACGGGGTGCAGCT...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGCTGCACCCCGTACTaGAAGAGGCGGAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLSCTPY*KRRKAA
Trigger: GGCTGCCTTCCGCCTCTTCAAGTACGGGGTGCAGCT...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp GAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGAGCTGCACCCCGTACTaGAAGAGGCGGAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: EWRNPPAPHPVPCGRAPESCTPY*KRRKAA
Trigger: GGCTGCCTTCCGCCTCTTCAAGTACGGGGTGCAGCT...CTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGACCAGTTGTGTGCCCTaGTCCCGGCCTCCACTTTCC +
Preference number: 5 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGTSCVP*SRPPLS
Trigger: GGAAAGTGGAGGCCGGGACAAGGGCACACAACTGGT...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445327.6
CDS-3UTR CAA 90 bp CGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGACCCGTGGAACCAGAGTaGGGTGCGGTGGATGGCTGC +
Preference number: 5 (lower is better)
Translates to: RSSSRPLWPRPRVHWMGGPVEPE*GAVDGC
Trigger: GCAGCCATCCACCGCACCCAACTCTGGTTCCACGGG...TCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp TGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGACCAGTTGTGTGCCCTaGTCCTCCAAACAGCCCCGG +
Preference number: 5 (lower is better)
Translates to: WPRPRVHWMGGGAAGSLKTSCVP*SSKQPR
Trigger: CCGGGGCTGTTTGGAGGACAAGGGCACACAACTGGT...CTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394209.6
CDS-3UTR CAA 90 bp CGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTGGAGGGGCCCCCGAGAATaGGGCTCTGTGAGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: RVQQWRSKHGRMPRFSWWRGPRE*GSVRED
Trigger: GTCCTCCCTCACAGAGCCCAATTCTCGGGGGCCCCT...CCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CAA 90 bp GTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGAGTGTGGGGAGCTCTaGAACAGTTCGTACTTGGCG +
Preference number: 5 (lower is better)
Translates to: VAAPQSPLDGWRGGGQPEECGEL*NSSYLA
Trigger: CGCCAAGTACGAACTGTTCAAGAGCTCCCCACACTC...TTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp CTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGACCCAAGGCCTTCCCTaGAGGAGAGGGGTCAGGAGT +
Preference number: 5 (lower is better)
Translates to: LLIPSPVAAPQSPLDGWRTQGLP*RRGVRS
Trigger: ACTCCTGACCCCTCTCCTCAAGGGAAGGCCTTGGGT...CCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp AGGGGCGGCGGGCAGCCTGAAGGCGGGCTGAGGCATGAGCCAGTCCACGGCCTGTCGGGAGGGCAGTGCTaGGAAGGGGTTAGAAGTAGA +
Preference number: 5 (lower is better)
Translates to: RGGGQPEGGLRHEPVHGLSGGQC*EGVRSR
Trigger: TCTACTTCTAACCCCTTCCAAGCACTGCCCTCCCGA...CAGGCCGTGGACTGGCTCATGCCTCAGCCCGCCTTCAGGCTGCCCGCCGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394209.6
CDS TCA 90 bp TGGGGGTGGCACTCCACCAGCCCCCAGGTCTCGTCGCTCAAGGCGTaGGCTCGCTGCACCAGCATTTCACACACGTGGCGAGCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: WGWHSTSPQVSSLKA*ARCTSISHTWRAVA
Trigger: TGCCACAGCTCGCCACGTGTGTGAAATGCTGGTGCAGCGAGCTCACGCCTTGAGCGACGAGACCTGGGGGCTGGTGGAGTGCCACCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
ENST00000461756.1
ENST00000485182.5
ENST00000583813.1
ENST00000584819.5
CDS GCA 90 bp TTCCGGAAGACGAAGCGGCTATCTCCGCCCACGGGCCAGGCAGCCTaGACTTCCACCACGGACTCGTGGTCCTCCAAACCCCGCTATGGG +
Preference number: 5 (lower is better)
Translates to: FRKTKRLSPPTGQAA*TSTTDSWSSKPRYG
Trigger: CCCATAGCGGGGTTTGGAGGACCACGAGTCCGTGGTGGAAGTGCAGGCTGCCTGGCCCGTGGGCGGAGATAGCCGCTTCGTCTTCCGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578702.5
CDS CCA 90 bp GAGTTGGGTGCGGTGGATGGCTGCACTGAGGCTCGTGCCGGAGGCTaGCATGGGCAGGCTGAGGCGGTGGTTTGTCTTCTTCCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: ELGAVDGCTEARAGG*HGQAEAVVCLLPPG
Trigger: GCCTGGAGGAAGAAGACAAACCACCGCCTCAGCCTGCCCATGCCAGCCTCCGGCACGAGCCTCAGTGCAGCCATCCACCGCACCCAACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS CCA 90 bp TCTCCCGGACCAGGAACAGGCTGCACTGAGGCTCGTGCCGGAGGCTaGCATGGGCAGGCTGAGGCGGTGGTTTGTCTTCTTCCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: SPGPGTGCTEARAGG*HGQAEAVVCLLPPG
Trigger: GCCTGGAGGAAGAAGACAAACCACCGCCTCAGCCTGCCCATGCCAGCCTCCGGCACGAGCCTCAGTGCAGCCTGTTCCTGGTCCGGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CAA 90 bp CCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGGAGTGTGGGGAGCTCTaGAACAGTTCGTACTTGGCG +
Preference number: 5 (lower is better)
Translates to: PHPVPCGRAPESTGWVEGECGEL*NSSYLA
Trigger: CGCCAAGTACGAACTGTTCAAGAGCTCCCCACACTC...CCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGCGAAGCTTGTTGGGCTaGACACAGAAACCGAAGTCA +
Preference number: 5 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKARSLLG*TQKPKS
Trigger: TGACTTCGGTTTCTGTGTCAAGCCCAACAAGCTTCG...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp CCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGCCATTTCGAAGCTTGTaGGGCTTGACACAGAAACCG +
Preference number: 5 (lower is better)
Translates to: PRPRVHWMGGGAAGSLKAPFRSL*GLTQKP
Trigger: CGGTTTCTGTGTCAAGCCCAACAAGCTTCGAAATGG...CGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp GCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCCATTTCGAAGCTTGTaGGGCTTGACACAGAAACCG +
Preference number: 5 (lower is better)
Translates to: APQSPLDGWRGGGQPEGGPFRSL*GLTQKP
Trigger: CGGTTTCTGTGTCAAGCCCAACAAGCTTCGAAATGG...CCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp CCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTCCATTTCGAAGCTTGTaGGGCTTGACACAGAAACCG +
Preference number: 5 (lower is better)
Translates to: PVAAPQSPLDGWRGGGQPPFRSL*GLTQKP
Trigger: CGGTTTCTGTGTCAAGCCCAACAAGCTTCGAAATGG...AGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp GTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAAAGATCCGAAGCCCCTaGTGGCCATTTCGAAGCTTG +
Preference number: 5 (lower is better)
Translates to: VAAPQSPLDGWRGGGQPEKIRSP*WPFRSL
Trigger: CAAGCTTCGAAATGGCCACAAGGGGCTTCGGATCTT...TTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp TGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCTGGTGGAACTCCACGAGCAGCTGCACCCCGTACTaGAAGAGGCGGAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: WRSKHGRMPRFSWWNSTSSCTPY*KRRKAA
Trigger: GGCTGCCTTCCGCCTCTTCAAGTACGGGGTGCAGCT...GCTCGTGGAGTTCCACCAGCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CAA 90 bp CAGGCAGCCTGCACTTCCACCACGGACTCGTGGTCCTCCAAACCCCGCTCCAGTACCAGTTGTGTGCCCTaGTCCTGGAGGAGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: QAACTSTTDSWSSKPRSSTSCVP*SWRSPS
Trigger: GCTGGGGCTCCTCCAGGACAAGGGCACACAACTGGT...ACTGGAGCGGGGTTTGGAGGACCACGAGTCCGTGGTGGAAGTGCAGGCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS-3UTR CAA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGCGAAGCTTGTTGGGCTaGACACAGAAACCGAAGTCA +
Preference number: 5 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLRSLLG*TQKPKS
Trigger: TGACTTCGGTTTCTGTGTCAAGCCCAACAAGCTTCG...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGTGGCCATTTCGAAGCTaGTTGGGCTTGACACAGAAA +
Preference number: 5 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLWPFRS*LGLTQK
Trigger: TTTCTGTGTCAAGCCCAACAAGCTTCGAAATGGCCA...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp CGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGGCCATTTCGAAGCTaGTTGGGCTTGACACAGAAA +
Preference number: 5 (lower is better)
Translates to: RPRVHWMGGGAAGSLKAGWPFRS*LGLTQK
Trigger: TTTCTGTGTCAAGCCCAACAAGCTTCGAAATGGCCA...GCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp AGAGCTAGGAGAAGGAGAGGGGGCCACCCAAGGCCTTCCCTTGAGGAGAGGGGTCCCGTGGAACCAGAGTaGGGTGCGGTGGATGGCTGC +
Preference number: 5 (lower is better)
Translates to: RARRRRGGHPRPSLEERGPVEPE*GAVDGC
Trigger: GCAGCCATCCACCGCACCCAACTCTGGTTCCACGGG...ACCCCTCTCCTCAAGGGAAGGCCTTGGGTGGCCCCCTCTCCTTCTCCTAGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS CCA 90 bp AGGCGTGAGCTCGCTGCACCAGCATTTCACACACGTGGCGAGCTGTaGCACCTGCTGCCACCTCCACAGACCTCCTCAGGCAGAGGGGTA +
Preference number: 5 (lower is better)
Translates to: RRELAAPAFHTRGEL*HLLPPPQTSSGRGV
Trigger: TACCCCTCTGCCTGAGGAGGTCTGTGGAGGTGGCAGCAGGTGCCACAGCTCGCCACGTGTGTGAAATGCTGGTGCAGCGAGCTCACGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS-3UTR CAA 90 bp ATTCCCTGCCCTAGAGCAGCACCTCCAGAGCTAGGAGAAGGAGAGGGGGCCACCACCAGTTGTGTGCCCTaGTCCTGGAGGAGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: IPCPRAAPPELGEGEGATTSCVP*SWRSPS
Trigger: GCTGGGGCTCCTCCAGGACAAGGGCACACAACTGGT...GGTGGCCCCCTCTCCTTCTCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309156.9
CDS-3UTR CAA 90 bp CTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGTTGAACAGTTCGTACTaGGCGAAGTTTTTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: LWPRPRVHWMGGGAAGSLLNSSY*AKFFRK
Trigger: CTTCCGGAAAAACTTCGCCAAGTACGAACTGTTCAA...CAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp CCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGGCGGGCTGTGGCCATTTCGAAGCTaGTTGGGCTTGACACAGAAA +
Preference number: 5 (lower is better)
Translates to: PQSPLDGWRGGGQPEGGLWPFRS*LGLTQK
Trigger: TTTCTGTGTCAAGCCCAACAAGCTTCGAAATGGCCA...CAGCCCGCCTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp GCCACCCGCGTGCAGCAATGGCGCAGCAAGCACGGCAGGATGCCGCGGTTCAGCAAGATCCGAAGCCCCTaGTGGCCATTTCGAAGCTTG +
Preference number: 5 (lower is better)
Translates to: ATRVQQWRSKHGRMPRFSKIRSP*WPFRSL
Trigger: CAAGCTTCGAAATGGCCACAAGGGGCTTCGGATCTT...GCTGAACCGCGGCATCCTGCCGTGCTTGCTGCGCCATTGCTGCACGCGGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CAA 90 bp GGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCAAGCTGCACCCCGTACTaGAAGAGGCGGAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GLYKVWGVKPPGLPPLLPSCTPY*KRRKAA
Trigger: GGCTGCCTTCCGCCTCTTCAAGTACGGGGTGCAGCT...TGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS CCA 90 bp TCCTCCTCTCGAAGTTTCCTGCCGGTGGTTGGGATGAGGAGAGGCTaGGACCTCTTTACCTCCTCAGGCAGAGGGGTATCAGGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: SSSRSFLPVVGMRRG*DLFTSSGRGVSGGR
Trigger: CCGGCCCCCTGATACCCCTCTGCCTGAGGAGGTAAAGAGGTCCCAGCCTCTCCTCATCCCAACCACCGGCAGGAAACTTCGAGAGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
ENST00000485182.5
ENST00000577695.5
ENST00000578702.5
ENST00000584053.1
ENST00000584819.5
CDS CCA 90 bp TGCTGTCCAATAAGCCGCTGGCTCTCCTCACGGGAAATGCGCCCGTaGAACCAGAGTTGGGTGCGGTGGATGGCTGCACTGAGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: CCPISRWLSSREMRP*NQSWVRWMAALRLV
Trigger: CACGAGCCTCAGTGCAGCCATCCACCGCACCCAACTCTGGTTCCACGGGCGCATTTCCCGTGAGGAGAGCCAGCGGCTTATTGGACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS CCA 90 bp CAGCCCGCAGAGACGTCTGTCTTAGAGACTTGGGGAAACCCAAACTaGGGTAAACTGGGCGAGCCAGAGAGTGAGGGCGGCTCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: QPAETSVLETWGNPN*GKLGEPESEGGSPR
Trigger: CCGGGGAGAGCCGCCCTCACTCTCTGGCTCGCCCAGTTTACCCCAGTTTGGGTTTCCCCAAGTCTCTAAGACAGACGTCTCTGCGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584853.1
CDS-3UTR CAA 90 bp TGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGGGCGGCGGGCAGCCTGAAGTTGAACAGTTCGTACTaGGCGAAGTTTTTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: WPRPRVHWMGGGAAGSLKLNSSY*AKFFRK
Trigger: CTTCCGGAAAAACTTCGCCAAGTACGAACTGTTCAA...CTTCAGGCTGCCCGCCGCCCCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp CTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGCGAAGCTTGTTGGGCTaGACACAGAAACCGAAGTCA +
Preference number: 5 (lower is better)
Translates to: LLIPSPVAAPQSPLDGWRRSLLG*TQKPKS
Trigger: TGACTTCGGTTTCTGTGTCAAGCCCAACAAGCTTCG...CCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp GCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGCGAAGCTTGTTGGGCTaGACACAGAAACCGAAGTCA +
Preference number: 5 (lower is better)
Translates to: APHPVPCGRAPESTGWVERSLLG*TQKPKS
Trigger: TGACTTCGGTTTCTGTGTCAAGCCCAACAAGCTTCG...CTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp CTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTGGAGGCCATTTCGAAGCTTGTaGGGCTTGACACAGAAACCG +
Preference number: 5 (lower is better)
Translates to: LLIPSPVAAPQSPLDGWRPFRSL*GLTQKP
Trigger: CGGTTTCTGTGTCAAGCCCAACAAGCTTCGAAATGG...CCTCCACCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp CCTCTCGGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTACCCAAGGCCTTCCCTaGAGGAGAGGGGTCAGGAGT +
Preference number: 5 (lower is better)
Translates to: PLGLYKVWGVKPPGLPPLTQGLP*RRGVRS
Trigger: ACTCCTGACCCCTCTCCTCAAGGGAAGGCCTTGGGT...AAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACCGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS TCA 90 bp GGGGTCCCAGGGGCTGGGCAAAGGTCTTCCGGAGAGCTGCTAAGATaGGGTGGAGACAGATCCAGCTCCATGGCGTCTGAGCAAGAGAGG +
Preference number: 5 (lower is better)
Translates to: GVPGAGQRSSGELLR*GGDRSSSMASEQER
Trigger: CCTCTCTTGCTCAGACGCCATGGAGCTGGATCTGTCTCCACCTCATCTTAGCAGCTCTCCGGAAGACCTTTGCCCAGCCCCTGGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
ENST00000485182.5
ENST00000577695.5
ENST00000578702.5
ENST00000583813.1
ENST00000584053.1
ENST00000584819.5
CDS GCA 90 bp TCGCTGCACCAGCATTTCACACACGTGGCGAGCTGTGGCACCTGCTaGCACCTCCACAGACCTGCAGGCCCCATCCTCACTGTACACCTT +
Preference number: 5 (lower is better)
Translates to: SLHQHFTHVASCGTC*HLHRPAGPILTVHL
Trigger: AAGGTGTACAGTGAGGATGGGGCCTGCAGGTCTGTGGAGGTGGCAGCAGGTGCCACAGCTCGCCACGTGTGTGAAATGCTGGTGCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
ENST00000485182.5
ENST00000584819.5
CDS CCA 90 bp TGGGCATCCCGTAGAGCTTGCGGCCCTGCGTCACCACGTACACGTTaGACTCGTTCACATCTGCCACGTACTGCAGGTGCCTCGGATCCT +
Preference number: 5 (lower is better)
Translates to: WASRRACGPASPRTR*TRSHLPRTAGASDP
Trigger: AGGATCCGAGGCACCTGCAGTACGTGGCAGATGTGAACGAGTCCAACGTGTACGTGGTGACGCAGGGCCGCAAGCTCTACGGGATGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS CCA 90 bp ACCAGGAACAGGCCGTCTACCAAGCCCTGCTGTCCAATAAGCCGCTaGCTCTCCTCACGGGAAATGCGCCCGTGGAACCAGAGTTGGGTG +
Preference number: 5 (lower is better)
Translates to: TRNRPSTKPCCPISR*LSSREMRPWNQSWV
Trigger: CACCCAACTCTGGTTCCACGGGCGCATTTCCCGTGAGGAGAGCCAGCGGCTTATTGGACAGCAGGGCTTGGTAGACGGCCTGTTCCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp CTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCGCCCCAGAGTCCACTGGATGGGTTGAACAGTTCGTACTaGGCGAAGTTTTTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: LPLLIPSPVAAPQSPLDGLNSSY*AKFFRK
Trigger: CTTCCGGAAAAACTTCGCCAAGTACGAACTGTTCAA...CCCATCCAGTGGACTCTGGGGCGCGGCCACAGGGGACGGGATGAGGAGCGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS TCA 90 bp CTGTGGGTAGACAAGTGTCAGGGATCAGGGCTCCAGCATCCAGGTTaGGGATCAGGGCATCCCAGCGCCCAGACAGCCCTCATGCACTCA +
Preference number: 5 (lower is better)
Translates to: LWVDKCQGSGLQHPG*GSGHPSAQTALMHS
Trigger: TGAGTGCATGAGGGCTGTCTGGGCGCTGGGATGCCCTGATCCTCAACCTGGATGCTGGAGCCCTGATCCCTGACACTTGTCTACCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461756.1
CDS GCA 90 bp CTTGCGGCCCTGCGTCACCACGTACACGTTGGACTCGTTCACATCTaGCACGTACTGCAGGTGCCTCGGATCCTTAGAGGTGCCCTTGGT +
Preference number: 5 (lower is better)
Translates to: LAALRHHVHVGLVHI*HVLQVPRILRGALG
Trigger: ACCAAGGGCACCTCTAAGGATCCGAGGCACCTGCAGTACGTGGCAGATGTGAACGAGTCCAACGTGTACGTGGTGACGCAGGGCCGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp AGCAGAGGAGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGAGTGTGGGGAGCTCTaGAACAGTTCGTACTTGGCG +
Preference number: 5 (lower is better)
Translates to: SRGENWSGGTLPLLIPSPECGEL*NSSYLA
Trigger: CGCCAAGTACGAACTGTTCAAGAGCTCCCCACACTC...AGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp GTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTAAGATCCGAAGCCCCTaGTGGCCATTTCGAAGCTTG +
Preference number: 5 (lower is better)
Translates to: VGRETAWAAPTSPIIPCPKIRSP*WPFRSL
Trigger: CAAGCTTCGAAATGGCCACAAGGGGCTTCGGATCTT...AGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS GCA 90 bp CCGTACTTGAAGAGGCGGAAGGCAGCCAGCCAGCAGGTGCGGCTCTaGTCATCTTCACTGCAGAAGATCCGAAGCCCCTTGTGGCCATTT +
Preference number: 5 (lower is better)
Translates to: PYLKRRKAASQQVRL*SSSLQKIRSPLWPF
Trigger: AAATGGCCACAAGGGGCTTCGGATCTTCTGCAGTGAAGATGAGCAGAGCCGCACCTGCTGGCTGGCTGCCTTCCGCCTCTTCAAGTACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp CATGAGCCAGTCCACGGCCTGGTCAGAGGGCCACCCGCGTGCAGCAATGGCGCATTGAACAGTTCGTACTaGGCGAAGTTTTTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: HEPVHGLVRGPPACSNGALNSSY*AKFFRK
Trigger: CTTCCGGAAAAACTTCGCCAAGTACGAACTGTTCAA...TGCGCCATTGCTGCACGCGGGTGGCCCTCTGACCAGGCCGTGGACTGGCTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS-3UTR CAA 90 bp TGGGCTGCCCCCACTTCTCCCATAATTCCCTGCCCTAGAGCAGCACCTCCAGAGGAGTGTGGGGAGCTCTaGAACAGTTCGTACTTGGCG +
Preference number: 5 (lower is better)
Translates to: WAAPTSPIIPCPRAAPPEECGEL*NSSYLA
Trigger: CGCCAAGTACGAACTGTTCAAGAGCTCCCCACACTC...CTCTGGAGGTGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGCAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp GGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCAAAGATCCGAAGCCCCTaGTGGCCATTTCGAAGCTTG +
Preference number: 5 (lower is better)
Translates to: GLYKVWGVKPPGLPPLLPKIRSP*WPFRSL
Trigger: CAAGCTTCGAAATGGCCACAAGGGGCTTCGGATCTT...TGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS TCA 90 bp CATCCCAGCGCCCAGACAGCCCTCATGCACTCACTGGGGAGCTCTTaGACAGTTCGTACTTGGCGAAGTTTTTCCGGAAGACGAAGCGGC +
Preference number: 5 (lower is better)
Translates to: HPSAQTALMHSLGSS*TVRTWRSFSGRRSG
Trigger: GCCGCTTCGTCTTCCGGAAAAACTTCGCCAAGTACGAACTGTTCAAGAGCTCCCCAGTGAGTGCATGAGGGCTGTCTGGGCGCTGGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461756.1
CDS TCA 90 bp ACCTGCGCCCCAGGAATTGCACACGACTTGAGGGGAGGCAAAGGGTaGTTCATTCCCTTTCCGCACCTGCTAGACCCTCAGGGACTCCTA +
Preference number: 5 (lower is better)
Translates to: TCAPGIAHDLRGGKG*FIPFPHLLDPQGLL
Trigger: TAGGAGTCCCTGAGGGTCTAGCAGGTGCGGAAAGGGAATGAATCACCCTTTGCCTCCCCTCAAGTCGTGTGCAATTCCTGGGGCGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485182.5
ENST00000584819.5
CDS-3UTR CAA 90 bp AGAAAACTGGAGTGGCGGAACCCTCCCGCTCCTCATCCCGTCCCCTGTGGCCGCTTGAACAGTTCGTACTaGGCGAAGTTTTTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: RKLEWRNPPAPHPVPCGRLNSSY*AKFFRK
Trigger: CTTCCGGAAAAACTTCGCCAAGTACGAACTGTTCAA...GCGGCCACAGGGGACGGGATGAGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp GGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCACCATTTCGAAGCTTGTaGGGCTTGACACAGAAACCG +
Preference number: 5 (lower is better)
Translates to: GLYKVWGVKPPGLPPLLPPFRSL*GLTQKP
Trigger: CGGTTTCTGTGTCAAGCCCAACAAGCTTCGAAATGG...TGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp GAGTGGACTGGAGTGGGGGCTGTTTTCTATCTGAGGGAGGCAAAGAAGCAGAGGGGGCCGGAGGCGGTGTaGCTGAGAAGGGCATACAAT +
Preference number: 5 (lower is better)
Translates to: EWTGVGAVFYLREAKKQRGPEAV*LRRAYN
Trigger: ATTGTATGCCCTTCTCAGCAACACCGCCTCCGGCCC...CCTCTGCTTCTTTGCCTCCCTCAGATAGAAAACAGCCCCCACTCCAGTCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000445327.6
CDS TCA 90 bp GGGCCGGAGGCGGTGTTGCTGAGAAGGGCATACAATCTGGAGAGATaGAGCCTCGACAATTTAGAGGATCCCTCTCCTTCACTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GPEAVLLRRAYNLER*SLDNLEDPSPSLPS
Trigger: GGAGGGCAGTGAAGGAGAGGGATCCTCTAAATTGTCGAGGCTTCATCTCTCCAGATTGTATGCCCTTCTCAGCAACACCGCCTCCGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445327.6
ENST00000584853.1
CDS GCA 90 bp ATCCAGGTTGAGGATCAGGGCATCCCAGCGCCCAGACAGCCCTCATaGACTCACTGGGGAGCTCTTGAACAGTTCGTACTTGGCGAAGTT +
Preference number: 5 (lower is better)
Translates to: IQVEDQGIPAPRQPS*THWGALEQFVLGEV
Trigger: AACTTCGCCAAGTACGAACTGTTCAAGAGCTCCCCAGTGAGTGCATGAGGGCTGTCTGGGCGCTGGGATGCCCTGATCCTCAACCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461756.1
CDS-3UTR CAA 90 bp GGTCTGTACAAAGTGTGGGGCGTGAAACCGCCTGGGCTGCCCCCACTTCTCCCATGGCCATTTCGAAGCTaGTTGGGCTTGACACAGAAA +
Preference number: 5 (lower is better)
Translates to: GLYKVWGVKPPGLPPLLPWPFRS*LGLTQK
Trigger: TTTCTGTGTCAAGCCCAACAAGCTTCGAAATGGCCA...TGGGAGAAGTGGGGGCAGCCCAGGCGGTTTCACGCCCCACACTTTGTACAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS TCA 90 bp AGATCGGCGCAAGAAGCAGAAAAAGCGTTTCCAAAGCTTCCGTCCTaGACCCCGCAGCTGCAGAAAGCCCTGGATCTCAGGAAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: RSAQEAEKAFPKLPS*TPQLQKALDLRKAA
Trigger: GGCAGCTTTCCTGAGATCCAGGGCTTTCTGCAGCTGCGGGGTTCAGGACGGAAGCTTTGGAAACGCTTTTTCTGCTTCTTGCGCCGATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
ENST00000473071.1
ENST00000584819.5
CDS CCA 90 bp CGTTTCCAAAGCTTCCGTCCTGAACCCCGCAGCTGCAGAAAGCCCTaGATCTCAGGAAAGCTGCCAGCATTCAGGAAGTTCTGGATGAGG +
Preference number: 5 (lower is better)
Translates to: RFQSFRPEPRSCRKP*ISGKLPAFRKFWMR
Trigger: CCTCATCCAGAACTTCCTGAATGCTGGCAGCTTTCCTGAGATCCAGGGCTTTCTGCAGCTGCGGGGTTCAGGACGGAAGCTTTGGAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
ENST00000473071.1
ENST00000584819.5
CDS-3UTR CAA 90 bp GAGTGGACTGGAGTGGGGGCTGTTTTCTATCTGAGGGAGGCAAAGAAGCAGAGGGAGTGTGGGGAGCTCTaGAACAGTTCGTACTTGGCG +
Preference number: 5 (lower is better)
Translates to: EWTGVGAVFYLREAKKQRECGEL*NSSYLA
Trigger: CGCCAAGTACGAACTGTTCAAGAGCTCCCCACACTC...CCTCTGCTTCTTTGCCTCCCTCAGATAGAAAACAGCCCCCACTCCAGTCCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS GCA 90 bp CAAGGGTGGGGAGCCCAAACAAGATGGATGCAGATGGCGAGACTGTaGCTGCTGGTAATTCTTGTACAGCTGCACCCCGTACTTGAAGAG +
Preference number: 5 (lower is better)
Translates to: QGWGAQTRWMQMARL*LLVILVQLHPVLEE
Trigger: CTCTTCAAGTACGGGGTGCAGCTGTACAAGAATTACCAGCAGGCACAGTCTCGCCATCTGCATCCATCTTGTTTGGGCTCCCCACCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp GCCCCCACTTCTCCCATAATTCCCTGCCCTAGAGCAGCACCTCCAGAGCTAGGATGGCCATTTCGAAGCTaGTTGGGCTTGACACAGAAA +
Preference number: 5 (lower is better)
Translates to: APTSPIIPCPRAAPPELGWPFRS*LGLTQK
Trigger: TTTCTGTGTCAAGCCCAACAAGCTTCGAAATGGCCA...TCCTAGCTCTGGAGGTGCTGCTCTAGGGCAGGGAATTATGGGAGAAGTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS GCA 90 bp AAGCAGAAAAAGCGTTTCCAAAGCTTCCGTCCTGAACCCCGCAGCTaGAGAAAGCCCTGGATCTCAGGAAAGCTGCCAGCATTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: KQKKRFQSFRPEPRS*RKPWISGKLPAFRK
Trigger: CTTCCTGAATGCTGGCAGCTTTCCTGAGATCCAGGGCTTTCTGCAGCTGCGGGGTTCAGGACGGAAGCTTTGGAAACGCTTTTTCTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
ENST00000473071.1
ENST00000584819.5
CDS CCA 90 bp GTGCGGCTCTGCTCATCTTCACTGCAGAAGATCCGAAGCCCCTTGTaGCCATTTCGAAGCTTGTTGGGCTTGACACAGAAACCGAAGTCA +
Preference number: 5 (lower is better)
Translates to: VRLCSSSLQKIRSPL*PFRSLLGLTQKPKS
Trigger: TGACTTCGGTTTCTGTGTCAAGCCCAACAAGCTTCGAAATGGCCACAAGGGGCTTCGGATCTTCTGCAGTGAAGATGAGCAGAGCCGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS-3UTR CAA 90 bp GAGTGGACTGGAGTGGGGGCTGTTTTCTATCTGAGGGAGGCAAAGAAGCAGAGGCGAAGCTTGTTGGGCTaGACACAGAAACCGAAGTCA +
Preference number: 5 (lower is better)
Translates to: EWTGVGAVFYLREAKKQRRSLLG*TQKPKS
Trigger: TGACTTCGGTTTCTGTGTCAAGCCCAACAAGCTTCG...CCTCTGCTTCTTTGCCTCCCTCAGATAGAAAACAGCCCCCACTCCAGTCCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309156.9
ENST00000394211.7
ENST00000445327.6
CDS CCA 72 bp CTCGCTGCACCAGCATTTCACACACGTGGCGAGCTGTaGCACCTGCTGCCACCTCCACAGACCTGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: LAAPAFHTRGEL*HLLPPPQTCRP
Trigger: GGGCCTGCAGGTCTGTGGAGGTGGCAGCAGGTGCCACAGCTCGCCACGTGTGTGAAATGCTGGTGCAGCGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
ENST00000485182.5
ENST00000584819.5
CDS TCA 72 bp CACTCCACCAGCCCCCAGGTCTCGTCGCTCAAGGCGTaGGCTCGCTGCACCAGCATTTCACACACGTGGCGA +
Preference number: 6 (lower is better)
Translates to: HSTSPQVSSLKA*ARCTSISHTWR
Trigger: TCGCCACGTGTGTGAAATGCTGGTGCAGCGAGCTCACGCCTTGAGCGACGAGACCTGGGGGCTGGTGGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
ENST00000461756.1
ENST00000485182.5
ENST00000583813.1
ENST00000584819.5
CDS TCA 72 bp CCAGGGCCACACTCAGAGCCTCCCGGGGGTTCTCAATaGCACGCCCAGCATGGCCAGAGAAGTCCATGGCCA +
Preference number: 6 (lower is better)
Translates to: PGPHSEPPGGSQ*HAQHGQRSPWP
Trigger: TGGCCATGGACTTCTCTGGCCATGCTGGGCGTGTCATTGAGAACCCCCGGGAGGCTCTGAGTGTGGCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS CCA 72 bp CCAGGAACAGGCTGCACTGAGGCTCGTGCCGGAGGCTaGCATGGGCAGGCTGAGGCGGTGGTTTGTCTTCTT +
Preference number: 6 (lower is better)
Translates to: PGTGCTEARAGG*HGQAEAVVCLL
Trigger: AAGAAGACAAACCACCGCCTCAGCCTGCCCATGCCAGCCTCCGGCACGAGCCTCAGTGCAGCCTGTTCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394204.1
CDS CCA 72 bp GGGGGCCACGCCTGCCTCGAAATCACAGACCAACAGTaGGGTGGGGAGAGGAGCAGAGAATTCGGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: GGHACLEITDQQ*GGERSREFGRA
Trigger: TGCCCTCCCGAATTCTCTGCTCCTCTCCCCACCCCACTGTTGGTCTGTGATTTCGAGGCAGGCGTGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394209.6
CDS CCA 72 bp CTCGCTGCACCAGCATTTCACACACGTGGCGAGCTGTaGCACCTGCTGCCACCTCCACAGACCTCCTCAGGC +
Preference number: 6 (lower is better)
Translates to: LAAPAFHTRGEL*HLLPPPQTSSG
Trigger: GCCTGAGGAGGTCTGTGGAGGTGGCAGCAGGTGCCACAGCTCGCCACGTGTGTGAAATGCTGGTGCAGCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583813.1
CDS TCA 72 bp GACAAGTGTCAGGGATCAGGGCTCCAGCATCCAGGTTaGGGATCAGGGCATCCCAGCGCCCAGACAGCCCTC +
Preference number: 6 (lower is better)
Translates to: DKCQGSGLQHPG*GSGHPSAQTAL
Trigger: GAGGGCTGTCTGGGCGCTGGGATGCCCTGATCCTCAACCTGGATGCTGGAGCCCTGATCCCTGACACTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461756.1
CDS CCA 72 bp ATAAGCCGCTGGCTCTCCTCACGGGAAATGCGCCCGTaGAACCAGAGTTGGGTGCGGTGGATGGCTGCACTG +
Preference number: 6 (lower is better)
Translates to: ISRWLSSREMRP*NQSWVRWMAAL
Trigger: CAGTGCAGCCATCCACCGCACCCAACTCTGGTTCCACGGGCGCATTTCCCGTGAGGAGAGCCAGCGGCTTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309156.9
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS CAA 90 bp GCTGTGGGTAGACAAGTGTCAGGGATCAGGGCTCCAGCATCCAGGTaGAGGATCAGGGCATCCCAGCGCCCAGACAGCCCTCATGCACTC +
Preference number: 6 (lower is better)
Translates to: AVGRQVSGIRAPASR*RIRASQRPDSPHAL
Trigger: GAGTGCATGAGGGCTGTCTGGGCGCTGGGATGCCCTGATCCTCAACCTGGATGCTGGAGCCCTGATCCCTGACACTTGTCTACCCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461756.1
CDS CCA 72 bp CGTAGAGCTTGCGGCCCTGCGTCACCACGTACACGTTaGACTCGTTCACATCTGCCACGTACTGCAGGTGCC +
Preference number: 6 (lower is better)
Translates to: RRACGPASPRTR*TRSHLPRTAGA
Trigger: GGCACCTGCAGTACGTGGCAGATGTGAACGAGTCCAACGTGTACGTGGTGACGCAGGGCCGCAAGCTCTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS GCA 72 bp CACAGAAACCGAAGTCAGTGGGCATCCCGTAGAGCTTaGGGCCCTGCGTCACCACGTACACGTTGGACTCGT +
Preference number: 6 (lower is better)
Translates to: HRNRSQWASRRA*GPASPRTRWTR
Trigger: ACGAGTCCAACGTGTACGTGGTGACGCAGGGCCGCAAGCTCTACGGGATGCCCACTGACTTCGGTTTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS CCA 72 bp TCCCCGCAGCCCGCAGAGACGTCTGTCTTAGAGACTTaGGGAAACCCAAACTGGGGTAAACTGGGCGAGCCA +
Preference number: 6 (lower is better)
Translates to: SPQPAETSVLET*GNPNWGKLGEP
Trigger: TGGCTCGCCCAGTTTACCCCAGTTTGGGTTTCCCCAAGTCTCTAAGACAGACGTCTCTGCGGGCTGCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584853.1
CDS CAA 90 bp GCATCCCAGCGCCCAGACAGCCCTCATGCACTCACTGGGGAGCTCTaGAACAGTTCGTACTTGGCGAAGTTTTTCCGGAAGACGAAGCGG +
Preference number: 6 (lower is better)
Translates to: ASQRPDSPHALTGEL*NSSYLAKFFRKTKR
Trigger: CCGCTTCGTCTTCCGGAAAAACTTCGCCAAGTACGAACTGTTCAAGAGCTCCCCAGTGAGTGCATGAGGGCTGTCTGGGCGCTGGGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461756.1
CDS TCA 72 bp TCCACTTTCCCATCGGAGGGCCGGAGGCGGTGTTGCTaGGAAGGGCATACAATCTGGAGAGATGAAGCCTCG +
Preference number: 6 (lower is better)
Translates to: STFPSEGRRRCC*EGHTIWRDEAS
Trigger: CGAGGCTTCATCTCTCCAGATTGTATGCCCTTCTCAGCAACACCGCCTCCGGCCCTCCGATGGGAAAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445327.6
ENST00000584853.1
CDS GCA 72 bp CAGCCAGCCAGCAGGTGCGGCTCTGCTCATCTTCACTaGAGAAGATCCGAAGCCCCTTGTGGCCATTTCGAA +
Preference number: 6 (lower is better)
Translates to: QPASRCGSAHLH*RRSEAPCGHFE
Trigger: TTCGAAATGGCCACAAGGGGCTTCGGATCTTCTGCAGTGAAGATGAGCAGAGCCGCACCTGCTGGCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS GCA 72 bp GAGGATCAGGGCATCCCAGCGCCCAGACAGCCCTCATaGACTCACTGGGGAGCTCTTGAACAGTTCGTACTT +
Preference number: 6 (lower is better)
Translates to: EDQGIPAPRQPS*THWGALEQFVL
Trigger: AAGTACGAACTGTTCAAGAGCTCCCCAGTGAGTGCATGAGGGCTGTCTGGGCGCTGGGATGCCCTGATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461756.1
CDS GCA 72 bp CTGCTAGACCCTCAGGGACTCCTAACCAAGATCCCCTaGCTCCATGGAAGCGGCTGTGTATCTCCCACAGAC +
Preference number: 6 (lower is better)
Translates to: LLDPQGLLTKIP*LHGSGCVSPTD
Trigger: GTCTGTGGGAGATACACAGCCGCTTCCATGGAGGCAGGGGATCTTGGTTAGGAGTCCCTGAGGGTCTAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485182.5
ENST00000584053.1
ENST00000584819.5
CDS CCA 72 bp GAGACGTCTGTCTTAGAGACTTGGGGAAACCCAAACTaGGGTAAACTGGGCGAGCCAGAGAGTGAGGGCGGC +
Preference number: 6 (lower is better)
Translates to: ETSVLETWGNPN*GKLGEPESEGG
Trigger: GCCGCCCTCACTCTCTGGCTCGCCCAGTTTACCCCAGTTTGGGTTTCCCCAAGTCTCTAAGACAGACGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584853.1
CDS CAA 90 bp GACAGCCCTCATGCACTCACTGGGGAGCTCTTGAACAGTTCGTACTaGGCGAAGTTTTTCCGGAAGACGAAGCGGCTATCTCCGCCCACG +
Preference number: 6 (lower is better)
Translates to: DSPHALTGELLNSSY*AKFFRKTKRLSPPT
Trigger: CGTGGGCGGAGATAGCCGCTTCGTCTTCCGGAAAAACTTCGCCAAGTACGAACTGTTCAAGAGCTCCCCAGTGAGTGCATGAGGGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461756.1
CDS GCA 72 bp ACGTACACGTTGGACTCGTTCACATCTGCCACGTACTaGAGGTGCCTCGGATCCTTAGAGGTGCCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: TYTLDSFTSATY*RCLGSLEVPLV
Trigger: CACCAAGGGCACCTCTAAGGATCCGAGGCACCTGCAGTACGTGGCAGATGTGAACGAGTCCAACGTGTACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS CCA 72 bp AGCTTCCGTCCTGAACCCCGCAGCTGCAGAAAGCCCTaGATCTCAGGAAAGCTGCCAGCATTCAGGAAGTTC +
Preference number: 6 (lower is better)
Translates to: SFRPEPRSCRKP*ISGKLPAFRKF
Trigger: GAACTTCCTGAATGCTGGCAGCTTTCCTGAGATCCAGGGCTTTCTGCAGCTGCGGGGTTCAGGACGGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
ENST00000473071.1
ENST00000584819.5
CDS TCA 72 bp CCAGGAATTGCACACGACTTGAGGGGAGGCAAAGGGTaGTTCATTCCCTTTCCGCACCTGCTAGACCCTCAG +
Preference number: 6 (lower is better)
Translates to: PGIAHDLRGGKG*FIPFPHLLDPQ
Trigger: CTGAGGGTCTAGCAGGTGCGGAAAGGGAATGAATCACCCTTTGCCTCCCCTCAAGTCGTGTGCAATTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485182.5
ENST00000584053.1
ENST00000584819.5
CDS TCA 72 bp CCTTTACTACCTGCGCCCCAGGAATTGCACACGACTTaGGGGGAGGCAAAGGGTGATTCATTCCCTTTCCGC +
Preference number: 6 (lower is better)
Translates to: PLLPAPQELHTT*GEAKGDSFPFR
Trigger: GCGGAAAGGGAATGAATCACCCTTTGCCTCCCCTCAAGTCGTGTGCAATTCCTGGGGCGCAGGTAGTAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485182.5
ENST00000584819.5
CDS CCA 72 bp AGAGGGGAGGCACAGGACTTAAGGGTGGAGAAGCACTaGCCAATGCTGGGGAGTCGTGAATCTGCAGTGAAA +
Preference number: 6 (lower is better)
Translates to: RGEAQDLRVEKH*PMLGSRESAVK
Trigger: TTTCACTGCAGATTCACGACTCCCCAGCATTGGCCAGTGCTTCTCCACCCTTAAGTCCTGTGCCTCCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461756.1
CDS CAA 90 bp CAGGTGCGGCTCTGCTCATCTTCACTGCAGAAGATCCGAAGCCCCTaGTGGCCATTTCGAAGCTTGTTGGGCTTGACACAGAAACCGAAG +
Preference number: 6 (lower is better)
Translates to: QVRLCSSSLQKIRSP*WPFRSLLGLTQKPK
Trigger: CTTCGGTTTCTGTGTCAAGCCCAACAAGCTTCGAAATGGCCACAAGGGGCTTCGGATCTTCTGCAGTGAAGATGAGCAGAGCCGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS TCA 72 bp CAAGAAGCAGAAAAAGCGTTTCCAAAGCTTCCGTCCTaGACCCCGCAGCTGCAGAAAGCCCTGGATCTCAGG +
Preference number: 6 (lower is better)
Translates to: QEAEKAFPKLPS*TPQLQKALDLR
Trigger: CCTGAGATCCAGGGCTTTCTGCAGCTGCGGGGTTCAGGACGGAAGCTTTGGAAACGCTTTTTCTGCTTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
ENST00000473071.1
ENST00000584819.5
CDS GCA 72 bp GGAGCCCAAACAAGATGGATGCAGATGGCGAGACTGTaGCTGCTGGTAATTCTTGTACAGCTGCACCCCGTA +
Preference number: 6 (lower is better)
Translates to: GAQTRWMQMARL*LLVILVQLHPV
Trigger: TACGGGGTGCAGCTGTACAAGAATTACCAGCAGGCACAGTCTCGCCATCTGCATCCATCTTGTTTGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
CDS GCA 72 bp CTCACTGTACACCTTTACTACCTGCGCCCCAGGAATTaGACACGACTTGAGGGGAGGCAAAGGGTGATTCAT +
Preference number: 6 (lower is better)
Translates to: LTVHLYYLRPRN*TRLEGRQRVIH
Trigger: ATGAATCACCCTTTGCCTCCCCTCAAGTCGTGTGCAATTCCTGGGGCGCAGGTAGTAAAGGTGTACAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485182.5
ENST00000584819.5
CDS CCA 72 bp GAAAGTGACTGTCCCCAGTCACACAGGACTGTGATTTaGCTCTTTCTACAACATAGAGGGGAGGCACAGGAC +
Preference number: 6 (lower is better)
Translates to: ESDCPQSHRTVI*LFLQHRGEAQD
Trigger: GTCCTGTGCCTCCCCTCTATGTTGTAGAAAGAGCCAAATCACAGTCCTGTGTGACTGGGGACAGTCACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461756.1
CDS CAA 72 bp AACAGGGAGTGTGGGGAGCTCTTGAACAGTTCGTACTaGGCGAAGTTTTTCCGGAAGACGAAGCGGCTATCT +
Preference number: 6 (lower is better)
Translates to: NRECGELLNSSY*AKFFRKTKRLS
Trigger: AGATAGCCGCTTCGTCTTCCGGAAAAACTTCGCCAAGTACGAACTGTTCAAGAGCTCCCCACACTCCCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6
ENST00000578702.5
CDS CAA 72 bp CATGCACTCACTGGGGAGCTCTTGAACAGTTCGTACTaGGCGAAGTTTTTCCGGAAGACGAAGCGGCTATCT +
Preference number: 6 (lower is better)
Translates to: HALTGELLNSSY*AKFFRKTKRLS
Trigger: AGATAGCCGCTTCGTCTTCCGGAAAAACTTCGCCAAGTACGAACTGTTCAAGAGCTCCCCAGTGAGTGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461756.1
CDS TCA 72 bp GCGGTGTTGCTGAGAAGGGCATACAATCTGGAGAGATaGAGCCTCGACAATTTAGAGGATCCCTCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: AVLLRRAYNLER*SLDNLEDPSPS
Trigger: TGAAGGAGAGGGATCCTCTAAATTGTCGAGGCTTCATCTCTCCAGATTGTATGCCCTTCTCAGCAACACCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445327.6
ENST00000584853.1
CDS CCA 72 bp TGCTCATCTTCACTGCAGAAGATCCGAAGCCCCTTGTaGCCATTTCGAAGCTTGTTGGGCTTGACACAGAAA +
Preference number: 6 (lower is better)
Translates to: CSSSLQKIRSPL*PFRSLLGLTQK
Trigger: TTTCTGTGTCAAGCCCAACAAGCTTCGAAATGGCCACAAGGGGCTTCGGATCTTCTGCAGTGAAGATGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309156.9
ENST00000394204.1
ENST00000394209.6
ENST00000394211.7
ENST00000445327.6