RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000100351

Ensembl transcript IDs: ENST00000344138.9, ENST00000407075.3, ENST00000420971.5, ENST00000460449.1, ENST00000461082.1, ENST00000478445.1, ENST00000481263.1

Found 290 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACCTGCAGGGGTACACACCCATACCCACAAACTCCGAGTGCACTTaGTGCAGAACGGGTTTGCACCCGGCCTCCCCTAAGGCCCTGAGC +
Preference number: 1 (lower is better)
Translates to: HLQGYTPIPTNSECT*CRTGLHPASPKALS
Trigger: GCTCAGGGCCTTAGGGGAGGCCGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGGTATGGGTGTGTACCCCTGCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR GCA 90 bp CTGCAGGGGTACACACCCATACCCACAAACTCCGAGTGCACTTGGTaGAGAACGGGTTTGCACCCGGCCTCCCCTAAGGCCCTGAGCTTC +
Preference number: 1 (lower is better)
Translates to: LQGYTPIPTNSECTW*RTGLHPASPKALSF
Trigger: GAAGCTCAGGGCCTTAGGGGAGGCCGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGGTATGGGTGTGTACCCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR GCA 90 bp TGTGCACACCTGCAGGGGTACACACCCATACCCACAAACTCCGAGTaGACTTGGTGCAGAACGGGTTTGCACCCGGCCTCCCCTAAGGCC +
Preference number: 1 (lower is better)
Translates to: CAHLQGYTPIPTNSE*TWCRTGLHPASPKA
Trigger: GGCCTTAGGGGAGGCCGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGGTATGGGTGTGTACCCCTGCAGGTGTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR CCA 90 bp TCTCTCCAACCCCGTCCTGCCTTCACATCCCCGCTCAGACTCGCTTaGCTGCCCGCAGCACTGGGCTGCACCTTAATTCCTAATGCAACA +
Preference number: 1 (lower is better)
Translates to: SLQPRPAFTSPLRLA*LPAALGCTLIPNAT
Trigger: TGTTGCATTAGGAATTAAGGTGCAGCCCAGTGCTGCGGGCAGCCAAGCGAGTCTGAGCGGGGATGTGAAGGCAGGACGGGGTTGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR TCA 90 bp TCCAGGTGCAACTCTTGGGCAGCAGGAGGACAGCAGTGGTCAGACTaGACAGGAAGCTGGTGTCAAAGCCAGCTTCCACCTGGGGTCATG +
Preference number: 1 (lower is better)
Translates to: SRCNSWAAGGQQWSD*TGSWCQSQLPPGVM
Trigger: CATGACCCCAGGTGGAAGCTGGCTTTGACACCAGCTTCCTGTTCAGTCTGACCACTGCTGTCCTCCTGCTGCCCAAGAGTTGCACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR GCA 90 bp TTCACATCCCCGCTCAGACTCGCTTGGCTGCCCGCAGCACTGGGCTaGACCTTAATTCCTAATGCAACAGTGCCCACCCCTTGGAGAACA +
Preference number: 1 (lower is better)
Translates to: FTSPLRLAWLPAALG*TLIPNATVPTPWRT
Trigger: TGTTCTCCAAGGGGTGGGCACTGTTGCATTAGGAATTAAGGTGCAGCCCAGTGCTGCGGGCAGCCAAGCGAGTCTGAGCGGGGATGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR CCA 90 bp ACCTCCAGAGTGAGCCCTTGGACACATGATTCTAGCGTGATGGGATaGAGAGCGACAGCCATGGTGGGGTTCCTTGCTCCAGGTGCAACT +
Preference number: 1 (lower is better)
Translates to: TSRVSPWTHDSSVMG*RATAMVGFLAPGAT
Trigger: AGTTGCACCTGGAGCAAGGAACCCCACCATGGCTGTCGCTCTCCATCCCATCACGCTAGAATCATGTGTCCAAGGGCTCACTCTGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR GCA 90 bp CAACCCCACCCTGTTGTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTaGTTAGCTGTTCTCCGTGAAAATTCCCAAGACAAGGAGGAAGCA +
Preference number: 1 (lower is better)
Translates to: QPHPVVLCPVPRCGL*LAVLRENSQDKEEA
Trigger: TGCTTCCTCCTTGTCTTGGGAATTTTCACGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAACAACAGGGTGGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR TCA 90 bp CCCTCATTCCTTGTAGGTGGTTTGGGTGACTTTCCCGCTTCCTTCTaGATGGAGGCTGATGAGCAAGGGAAAGATGCTTTGGCATCTCAG +
Preference number: 1 (lower is better)
Translates to: PSFLVGGLGDFPASF*MEADEQGKDALASQ
Trigger: CTGAGATGCCAAAGCATCTTTCCCTTGCTCATCAGCCTCCATTCAGAAGGAAGCGGGAAAGTCACCCAAACCACCTACAAGGAATGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR GCA 90 bp TCACCCCCTTTCCTGTCTCAGCACACACACAGACACACAGATGCATaGACGCACATGTCCACACATGCAGGAATGCACACATATGCATAC +
Preference number: 1 (lower is better)
Translates to: SPPFLSQHTHRHTDA*THMSTHAGMHTYAY
Trigger: GTATGCATATGTGTGCATTCCTGCATGTGTGGACATGTGCGTGCATGCATCTGTGTGTCTGTGTGTGTGCTGAGACAGGAAAGGGGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR CCA 90 bp TACCTCCGTCTAACTAGAGCTGGTCCTCCCACATCATCAGACAACTaGATGGAGTTTGTGGGCTGTTTAAAGCATATGGTTTGTAAATAC +
Preference number: 1 (lower is better)
Translates to: YLRLTRAGPPTSSDN*MEFVGCLKHMVCKY
Trigger: GTATTTACAAACCATATGCTTTAAACAGCCCACAAACTCCATCCAGTTGTCTGATGATGTGGGAGGACCAGCTCTAGTTAGACGGAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR CCA 90 bp GTCATGTTTAGTCAATCAATTCATAGTCAGGCTCCTATCATCAAGTaGGCTTCTTTCCATGCCACTGGGCAAGGCATCTTCAAAAGAGAA +
Preference number: 1 (lower is better)
Translates to: VMFSQSIHSQAPIIK*ASFHATGQGIFKRE
Trigger: TTCTCTTTTGAAGATGCCTTGCCCAGTGGCATGGAAAGAAGCCCACTTGATGATAGGAGCCTGACTATGAATTGATTGACTAAACATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR TCA 90 bp GATTGTGGAAAATCCCTCGATTTCCCAGTACTTCGCTCCTCACATTaGAACATTCATTTGAAAGACCCAAGGAATATTAATTTGAACAGA +
Preference number: 1 (lower is better)
Translates to: DCGKSLDFPVLRSSH*NIHLKDPRNINLNR
Trigger: TCTGTTCAAATTAATATTCCTTGGGTCTTTCAAATGAATGTTTCAATGTGAGGAGCGAAGTACTGGGAAATCGAGGGATTTTCCACAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR GCA 90 bp CATACCGCCTGCCTACGGGGTCAGCTCCTGCAGGCCGATGACCCCTGTCACCCCCCCACAAACTCCGAGTaGACTTGGTGCAGAACGGGT +
Preference number: 2 (lower is better)
Translates to: HTACLRGQLLQADDPCHPPTNSE*TWCRTG
Trigger: ACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGG...GGGGTGACAGGGGTCATCGGCCTGCAGGAGCTGACCCCGTAGGCAGGCGGTATG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR GCA 90 bp CATACCGCCTGCCTACGGGGTCAGCTCCTGCAGGCCGATGACCCCTGTCACCCCGTGGGCTTCTTTCCATaGCACTGGGCAAGGCATCTT +
Preference number: 2 (lower is better)
Translates to: HTACLRGQLLQADDPCHPVGFFP*HWARHL
Trigger: AAGATGCCTTGCCCAGTGGCATGGAAAGAAGCCCAC...GGGGTGACAGGGGTCATCGGCCTGCAGGAGCTGACCCCGTAGGCAGGCGGTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR CCA 90 bp CATACCGCCTGCCTACGGGGTCAGCTCCTGCAGGCCGATGACCCCTGTCACCCCAACTCCGAGTGCACTTaGTGCAGAACGGGTTTGCAC +
Preference number: 2 (lower is better)
Translates to: HTACLRGQLLQADDPCHPNSECT*CRTGLH
Trigger: GTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTT...GGGGTGACAGGGGTCATCGGCCTGCAGGAGCTGACCCCGTAGGCAGGCGGTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR CCA 90 bp CAGGTGCTCCTTACTCACACTCGACTCCCTCCTGCCTCCACCAGGCTATTTTCTCCGCTCAGACTCGCTTaGCTGCCCGCAGCACTGGGC +
Preference number: 2 (lower is better)
Translates to: QVLLTHTRLPPASTRLFSPLRLA*LPAALG
Trigger: GCCCAGTGCTGCGGGCAGCCAAGCGAGTCTGAGCGG...AGAAAATAGCCTGGTGGAGGCAGGAGGGAGTCGAGTGTGAGTAAGGAGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR CCA 90 bp AGAACGGGTTTGCACCCGGCCTCCCCTAAGGCCCTGAGCTTCCTCTCTACTGTCGGAGAGCGACAGCCATaGTGGGGTTCCTTGCTCCAG +
Preference number: 2 (lower is better)
Translates to: RTGLHPASPKALSFLSTVGERQP*WGSLLQ
Trigger: CTGGAGCAAGGAACCCCACCATGGCTGTCGCTCTCC...GACAGTAGAGAGGAAGCTCAGGGCCTTAGGGGAGGCCGGGTGCAAACCCGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR CAA 90 bp GGAGAGCGACAGCCATGGTGGGGTTCCTTGCTCCAGGTGCAACTCTaGGGCAGCAGGAGGACAGCAGTGGTCAGACTGAACAGGAAGCTG +
Preference number: 2 (lower is better)
Translates to: GERQPWWGSLLQVQL*GSRRTAVVRLNRKL
Trigger: CAGCTTCCTGTTCAGTCTGACCACTGCTGTCCTCCTGCTGCCCAAGAGTTGCACCTGGAGCAAGGAACCCCACCATGGCTGTCGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR CCA 90 bp CATACCGCCTGCCTACGGGGTCAGCTCCTGCAGGCCGATGACCCCTGTCACCCCGCTCCTATCATCAAGTaGGCTTCTTTCCATGCCACT +
Preference number: 2 (lower is better)
Translates to: HTACLRGQLLQADDPCHPAPIIK*ASFHAT
Trigger: AGTGGCATGGAAAGAAGCCCACTTGATGATAGGAGC...GGGGTGACAGGGGTCATCGGCCTGCAGGAGCTGACCCCGTAGGCAGGCGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR CAA 90 bp ACACCCATACCCACAAACTCCGAGTGCACTTGGTGCAGAACGGGTTaGCACCCGGCCTCCCCTAAGGCCCTGAGCTTCCTCTCTACTGTC +
Preference number: 2 (lower is better)
Translates to: TPIPTNSECTWCRTG*HPASPKALSFLSTV
Trigger: GACAGTAGAGAGGAAGCTCAGGGCCTTAGGGGAGGCCGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGGTATGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR TCA 90 bp GGGTATGCAACGCAGACACCAGACACGGCCTGGCCAAACAAGGACACTTTGTTTTGCAAGCCCTCCAGGTaGGCGGGGCTTGCAGGTCAG +
Preference number: 2 (lower is better)
Translates to: GYATQTPDTAWPNKDTLFCKPSR*AGLAGQ
Trigger: CTGACCTGCAAGCCCCGCTCACCTGGAGGGCTTGCA...AAACAAAGTGTCCTTGTTTGGCCAGGCCGTGTCTGGTGTCTGCGTTGCATACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR GCA 90 bp GCACACCTGCAGGGGTACACACCCATACCCACAAACTCCGAGTGCACTTGGTGCGAACAGGAGGAGAGCTaGTCTGCAAGCCCTCCAGGT +
Preference number: 2 (lower is better)
Translates to: AHLQGYTPIPTNSECTWCEQEES*SASPPG
Trigger: ACCTGGAGGGCTTGCAGAGCAGCTCTCCTCCTGTTC...GCACCAAGTGCACTCGGAGTTTGTGGGTATGGGTGTGTACCCCTGCAGGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR TCA 90 bp AGAACGGGTTTGCACCCGGCCTCCCCTAAGGCCCTGAGCTTCCTCTCTACTGTCCAGCAGTGGTCAGACTaGACAGGAAGCTGGTGTCAA +
Preference number: 2 (lower is better)
Translates to: RTGLHPASPKALSFLSTVQQWSD*TGSWCQ
Trigger: TTGACACCAGCTTCCTGTTCAGTCTGACCACTGCTG...GACAGTAGAGAGGAAGCTCAGGGCCTTAGGGGAGGCCGGGTGCAAACCCGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR GCA 90 bp CCCTGTTGTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGTCCATTTCATTTCCCTaGCCCCCTCCCAACTCCCCC +
Preference number: 2 (lower is better)
Translates to: PCCSVSSAEVWSLLSCSPSISFP*PPPNSP
Trigger: GGGGGAGTTGGGAGGGGGGCAGGGAAATGAAATGGA...CGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAACAACAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR GCA 90 bp AGAACGGGTTTGCACCCGGCCTCCCCTAAGGCCCTGAGCTTCCTCTCTACTGTCTTGTTCTGTGTCCAGTaGCGAGGTGTGGTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: RTGLHPASPKALSFLSTVLFCVQ*RGVVSA
Trigger: AGCAGAGACCACACCTCGGCACTGGACACAGAACAA...GACAGTAGAGAGGAAGCTCAGGGCCTTAGGGGAGGCCGGGTGCAAACCCGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR CCA 90 bp AGAACGGGTTTGCACCCGGCCTCCCCTAAGGCCCTGAGCTTCCTCTCTACTGTCTCCAGTGCCGAGGTGTaGTCTCTGCTTAGCTGTTCT +
Preference number: 2 (lower is better)
Translates to: RTGLHPASPKALSFLSTVSSAEV*SLLSCS
Trigger: AGAACAGCTAAGCAGAGACCACACCTCGGCACTGGA...GACAGTAGAGAGGAAGCTCAGGGCCTTAGGGGAGGCCGGGTGCAAACCCGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR GCA 90 bp CAGGTGCTCCTTACTCACACTCGACTCCCTCCTGCCTCCACCAGGCTATTTTCTACCTTCAATAACGGCTaGCCCCAACCCCATCCCTCC +
Preference number: 2 (lower is better)
Translates to: QVLLTHTRLPPASTRLFSTFNNG*PQPHPS
Trigger: GGAGGGATGGGGTTGGGGGCAGCCGTTATTGAAGGT...AGAAAATAGCCTGGTGGAGGCAGGAGGGAGTCGAGTGTGAGTAAGGAGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR TCA 90 bp CTTGCAGGTCAGCTAGAACGTGCCCCACCAAGTTCAACCCCACCCTGTTGTTCTGGAAGCAGTGACAGCTaGAGGCCAGGACAAAACTCC +
Preference number: 2 (lower is better)
Translates to: LAGQLERAPPSSTPPCCSGSSDS*RPGQNS
Trigger: GGAGTTTTGTCCTGGCCTTCAGCTGTCACTGCTTCC...AGAACAACAGGGTGGGGTTGAACTTGGTGGGGCACGTTCTAGCTGACCTGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR GCA 90 bp CATACCCACAAACTCCGAGTGCACTTGGTGCAGAACGGGTTTGCACCCGGCCTCTTCCTAATGCAACAGTaGCCACCCCTTGGAGAACAG +
Preference number: 2 (lower is better)
Translates to: HTHKLRVHLVQNGFAPGLFLMQQ*PPLGEQ
Trigger: CTGTTCTCCAAGGGGTGGGCACTGTTGCATTAGGAA...GAGGCCGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR CCA 90 bp GGGTATGCAACGCAGACACCAGACACGGCCTGGCCAAACAAGGACACTTTGTTTTCCAGGTGCAACTCTTaGGCAGCAGGAGGACAGCAG +
Preference number: 2 (lower is better)
Translates to: GYATQTPDTAWPNKDTLFSRCNS*AAGGQQ
Trigger: CTGCTGTCCTCCTGCTGCCCAAGAGTTGCACCTGGA...AAACAAAGTGTCCTTGTTTGGCCAGGCCGTGTCTGGTGTCTGCGTTGCATACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR CCA 90 bp CAGGTGCTCCTTACTCACACTCGACTCCCTCCTGCCTCCACCAGGCTATTTTCTTCTAGCGTGATGGGATaGAGAGCGACAGCCATGGTG +
Preference number: 2 (lower is better)
Translates to: QVLLTHTRLPPASTRLFSSSVMG*RATAMV
Trigger: CACCATGGCTGTCGCTCTCCATCCCATCACGCTAGA...AGAAAATAGCCTGGTGGAGGCAGGAGGGAGTCGAGTGTGAGTAAGGAGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR TCA 90 bp CATACCCACAAACTCCGAGTGCACTTGGTGCAGAACGGGTTTGCACCCGGCCTCAAACAGAGGTTCCACTaGGTAAGCTGCTTGGGGATT +
Preference number: 2 (lower is better)
Translates to: HTHKLRVHLVQNGFAPGLKQRFH*VSCLGI
Trigger: AATCCCCAAGCAGCTTACTCAGTGGAACCTCTGTTT...GAGGCCGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR GCA 90 bp CACCAGAATCGAATCACATACCTCCGTCTAACTAGAGCTGGTCCTCCCACATCACAGGTGAGCGGGGCTTaGAGGTCAGCTAGAACGTGC +
Preference number: 2 (lower is better)
Translates to: HQNRITYLRLTRAGPPTSQVSGA*RSARTC
Trigger: GCACGTTCTAGCTGACCTGCAAGCCCCGCTCACCTG...TGATGTGGGAGGACCAGCTCTAGTTAGACGGAGGTATGTGATTCGATTCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR GCA 90 bp CACCAGAATCGAATCACATACCTCCGTCTAACTAGAGCTGGTCCTCCCACATCACTAGGAGGCCAGCCTTaGACAGGCAGGGTCTCTCCA +
Preference number: 2 (lower is better)
Translates to: HQNRITYLRLTRAGPPTSLGGQP*TGRVSP
Trigger: TGGAGAGACCCTGCCTGTGCAAGGCTGGCCTCCTAG...TGATGTGGGAGGACCAGCTCTAGTTAGACGGAGGTATGTGATTCGATTCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR GCA 90 bp GGGTATGCAACGCAGACACCAGACACGGCCTGGCCAAACAAGGACACTTTGTTTGTTCCTTGCTCCAGGTaGAACTCTTGGGCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: GYATQTPDTAWPNKDTLFVPCSR*NSWAAG
Trigger: TCCTGCTGCCCAAGAGTTGCACCTGGAGCAAGGAAC...AAACAAAGTGTCCTTGTTTGGCCAGGCCGTGTCTGGTGTCTGCGTTGCATACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR GCA 90 bp CCTGAGAAGCCTTTCAAGGCACAAAGTCTCCACCAGAATCGAATCACATACCTCTCCCAACTCCCCCACTaGCTTCCACACACCCCTGAG +
Preference number: 2 (lower is better)
Translates to: PEKPFKAQSLHQNRITYLSQLPH*LPHTPE
Trigger: CTCAGGGGTGTGTGGAAGGCAGTGGGGGAGTTGGGA...GAGGTATGTGATTCGATTCTGGTGGAGACTTTGTGCCTTGAAAGGCTTCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR CCA 90 bp CCTGAGAAGCCTTTCAAGGCACAAAGTCTCCACCAGAATCGAATCACATACCTCGAGCGACAGCCATGGTaGGGTTCCTTGCTCCAGGTG +
Preference number: 2 (lower is better)
Translates to: PEKPFKAQSLHQNRITYLERQPW*GSLLQV
Trigger: CACCTGGAGCAAGGAACCCCACCATGGCTGTCGCTC...GAGGTATGTGATTCGATTCTGGTGGAGACTTTGTGCCTTGAAAGGCTTCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR CCA 90 bp TCTGAATGGAGGCTGATGAGCAAGGGAAAGATGCTTTGGCATCTCAGTACAAAACACCGTTCTCTTCCCTaGCCCCACTCACCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: SEWRLMSKGKMLWHLSTKHRSLP*PHSPSP
Trigger: GGGAGAGGGTGAGTGGGGCCAGGGAAGAGAACGGTG...TTTTGTACTGAGATGCCAAAGCATCTTTCCCTTGCTCATCAGCCTCCATTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR CCA 90 bp GGGTATGCAACGCAGACACCAGACACGGCCTGGCCAAACAAGGACACTTTGTTTTTGCCCTCTTTCTTGTaGGCAGCTCCAGACAAAAAG +
Preference number: 2 (lower is better)
Translates to: GYATQTPDTAWPNKDTLFLPSFL*AAPDKK
Trigger: CTTTTTGTCTGGAGCTGCCCACAAGAAAGAGGGCAA...AAACAAAGTGTCCTTGTTTGGCCAGGCCGTGTCTGGTGTCTGCGTTGCATACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR GCA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCATCTCCAACCCCGTCCTaGCTTCACATCCCCGCTCAG +
Preference number: 2 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPSPTPS*LHIPAQ
Trigger: CTGAGCGGGGATGTGAAGGCAGGACGGGGTTGGAGA...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR GCA 90 bp CACCAGAATCGAATCACATACCTCCGTCTAACTAGAGCTGGTCCTCCCACATCATTCCTTATGCTTCTTTaGTCCCTGCCTTCCGCAGCA +
Preference number: 2 (lower is better)
Translates to: HQNRITYLRLTRAGPPTSFLMLL*SLPSAA
Trigger: TGCTGCGGAAGGCAGGGAGCAAAGAAGCATAAGGAA...TGATGTGGGAGGACCAGCTCTAGTTAGACGGAGGTATGTGATTCGATTCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR GCA 90 bp CCTGAGAAGCCTTTCAAGGCACAAAGTCTCCACCAGAATCGAATCACATACCTCAGTCACAAGGGACACTaGTTGTGCTACACTGGCAGT +
Preference number: 2 (lower is better)
Translates to: PEKPFKAQSLHQNRITYLSHKGH*LCYTGS
Trigger: ACTGCCAGTGTAGCACAAGCAGTGTCCCTTGTGACT...GAGGTATGTGATTCGATTCTGGTGGAGACTTTGTGCCTTGAAAGGCTTCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR TCA 90 bp TCTGAATGGAGGCTGATGAGCAAGGGAAAGATGCTTTGGCATCTCAGTACAAAATGTGCACCTCCAGAGTaGGCCCTTGGACACATGATT +
Preference number: 2 (lower is better)
Translates to: SEWRLMSKGKMLWHLSTKCAPPE*ALGHMI
Trigger: AATCATGTGTCCAAGGGCTCACTCTGGAGGTGCACA...TTTTGTACTGAGATGCCAAAGCATCTTTCCCTTGCTCATCAGCCTCCATTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR GCA 90 bp TCTGAATGGAGGCTGATGAGCAAGGGAAAGATGCTTTGGCATCTCAGTACAAAAACACATGTGCACACCTaGAGGGGTACACACCCATAC +
Preference number: 2 (lower is better)
Translates to: SEWRLMSKGKMLWHLSTKTHVHT*RGTHPY
Trigger: GTATGGGTGTGTACCCCTGCAGGTGTGCACATGTGT...TTTTGTACTGAGATGCCAAAGCATCTTTCCCTTGCTCATCAGCCTCCATTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR GCA 90 bp TCTGAATGGAGGCTGATGAGCAAGGGAAAGATGCTTTGGCATCTCAGTACAAAACAGCAGCGGTTTCTCTaGTCTGATTCTTCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: SEWRLMSKGKMLWHLSTKQQRFL*SDSSSP
Trigger: GGGAGAGGAAGAATCAGAGCAGAGAAACCGCTGCTG...TTTTGTACTGAGATGCCAAAGCATCTTTCCCTTGCTCATCAGCCTCCATTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR CAA 90 bp TATGCAACGCAGACACCAGACACGGCCTGGCCAAACAAGGACACTTaGTTTTATTACTGCTTTCCTGAGAAGCCTTTCAAGGCACAAAGT +
Preference number: 2 (lower is better)
Translates to: YATQTPDTAWPNKDT*FYYCFPEKPFKAQS
Trigger: ACTTTGTGCCTTGAAAGGCTTCTCAGGAAAGCAGTAATAAAACAAAGTGTCCTTGTTTGGCCAGGCCGTGTCTGGTGTCTGCGTTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR TCA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCACACATGATTCTAGCGTaGTGGGATGGAGAGCGACAG +
Preference number: 2 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPHMILA*WDGERQ
Trigger: CTGTCGCTCTCCATCCCATCACGCTAGAATCATGTG...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR GCA 90 bp TCTGAATGGAGGCTGATGAGCAAGGGAAAGATGCTTTGGCATCTCAGTACAAAAAAGGGACACTGCTTGTaGTACACTGGCAGTCACTTC +
Preference number: 2 (lower is better)
Translates to: SEWRLMSKGKMLWHLSTKKGHCL*YTGSHF
Trigger: GAAGTGACTGCCAGTGTAGCACAAGCAGTGTCCCTT...TTTTGTACTGAGATGCCAAAGCATCTTTCCCTTGCTCATCAGCCTCCATTCAGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR CCA 90 bp CCTGAGAAGCCTTTCAAGGCACAAAGTCTCCACCAGAATCGAATCACATACCTCTATTTCCTTCATAGCTaGGGAAACAGAGGTTCCACT +
Preference number: 2 (lower is better)
Translates to: PEKPFKAQSLHQNRITYLYFLHS*GNRGST
Trigger: AGTGGAACCTCTGTTTCCCCAGCTATGAAGGAAATA...GAGGTATGTGATTCGATTCTGGTGGAGACTTTGTGCCTTGAAAGGCTTCTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR TCA 90 bp CCTGAGAAGCCTTTCAAGGCACAAAGTCTCCACCAGAATCGAATCACATACCTCATATTATTCTCCACCTaGGTTCCCTTTTGCATCAAC +
Preference number: 2 (lower is better)
Translates to: PEKPFKAQSLHQNRITYLILFST*VPFCIN
Trigger: GTTGATGCAAAAGGGAACTCAGGTGGAGAATAATAT...GAGGTATGTGATTCGATTCTGGTGGAGACTTTGTGCCTTGAAAGGCTTCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR TCA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCACTTAGCTGTTCTCCGTaGAAATTCCCAAGACAAGGA +
Preference number: 2 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPLSCSP*KFPRQG
Trigger: TCCTTGTCTTGGGAATTTTCACGGAGAACAGCTAAG...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR TCA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCAACTGGCAGTCACTTCTaGGTCAGAAAATCTTTCTTC +
Preference number: 2 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPTGSHF*VRKSFF
Trigger: GAAGAAAGATTTTCTGACTCAGAAGTGACTGCCAGT...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR GCA 72 bp CAGCCTTGCACAGGCAGGGTCTCTCCAACCCCGTCCTaGCTTCACATCCCCGCTCAGACTCGCTTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: QPCTGRVSPTPS*LHIPAQTRLAA
Trigger: GGCAGCCAAGCGAGTCTGAGCGGGGATGTGAAGGCAGGACGGGGTTGGAGAGACCCTGCCTGTGCAAGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR CCA 72 bp CCCCGTCCTGCCTTCACATCCCCGCTCAGACTCGCTTaGCTGCCCGCAGCACTGGGCTGCACCTTAATTCCT +
Preference number: 3 (lower is better)
Translates to: PRPAFTSPLRLA*LPAALGCTLIP
Trigger: AGGAATTAAGGTGCAGCCCAGTGCTGCGGGCAGCCAAGCGAGTCTGAGCGGGGATGTGAAGGCAGGACGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR TCA 72 bp AGAACAGGAGGAGAGCTGCTCTGCAAGCCCTCCAGGTaGGCGGGGCTTGCAGGTCAGCTAGAACGTGCCCCA +
Preference number: 3 (lower is better)
Translates to: RTGGELLCKPSR*AGLAGQLERAP
Trigger: TGGGGCACGTTCTAGCTGACCTGCAAGCCCCGCTCACCTGGAGGGCTTGCAGAGCAGCTCTCCTCCTGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR TCA 72 bp CCCTGTCACCCCCTGGTCTCGTTCTCACTCTCTACCTaGGGGGTATGCAACGCAGACACCAGACACGGCCTG +
Preference number: 3 (lower is better)
Translates to: PCHPLVSFSLST*GVCNADTRHGL
Trigger: CAGGCCGTGTCTGGTGTCTGCGTTGCATACCCCTCAGGTAGAGAGTGAGAACGAGACCAGGGGGTGACAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR GCA 72 bp AGAGCTGCTCTGCAAGCCCTCCAGGTGAGCGGGGCTTaGAGGTCAGCTAGAACGTGCCCCACCAAGTTCAAC +
Preference number: 3 (lower is better)
Translates to: RAALQALQVSGA*RSARTCPTKFN
Trigger: GTTGAACTTGGTGGGGCACGTTCTAGCTGACCTGCAAGCCCCGCTCACCTGGAGGGCTTGCAGAGCAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR GCA 72 bp CCGCTCAGACTCGCTTGGCTGCCCGCAGCACTGGGCTaGACCTTAATTCCTAATGCAACAGTGCCCACCCCT +
Preference number: 3 (lower is better)
Translates to: PLRLAWLPAALG*TLIPNATVPTP
Trigger: AGGGGTGGGCACTGTTGCATTAGGAATTAAGGTGCAGCCCAGTGCTGCGGGCAGCCAAGCGAGTCTGAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR GCA 72 bp TACACACCCATACCCACAAACTCCGAGTGCACTTGGTaGAGAACGGGTTTGCACCCGGCCTCCCCTAAGGCC +
Preference number: 3 (lower is better)
Translates to: YTPIPTNSECTW*RTGLHPASPKA
Trigger: GGCCTTAGGGGAGGCCGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGGTATGGGTGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR GCA 72 bp TTCTTTGCTCCCTGCCTTCCGCAGCAGCGGTTTCTCTaGTCTGATTCTTCCTCTCCCCACTGCCCAGCCCTC +
Preference number: 3 (lower is better)
Translates to: FFAPCLPQQRFL*SDSSSPHCPAL
Trigger: GAGGGCTGGGCAGTGGGGAGAGGAAGAATCAGAGCAGAGAAACCGCTGCTGCGGAAGGCAGGGAGCAAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR CCA 72 bp GGGTACACACCCATACCCACAAACTCCGAGTGCACTTaGTGCAGAACGGGTTTGCACCCGGCCTCCCCTAAG +
Preference number: 3 (lower is better)
Translates to: GYTPIPTNSECT*CRTGLHPASPK
Trigger: CTTAGGGGAGGCCGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGGTATGGGTGTGTACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR CAA 90 bp GCACACCTGCAGGGGTACACACCCATACCCACAAACTCCGAGTGCACTTGGTGCAACAGTGCCCACCCCTaGGAGAACAGGAGGAGAGCT +
Preference number: 3 (lower is better)
Translates to: AHLQGYTPIPTNSECTWCNSAHP*ENRRRA
Trigger: AGCTCTCCTCCTGTTCTCCAAGGGGTGGGCACTGTT...GCACCAAGTGCACTCGGAGTTTGTGGGTATGGGTGTGTACCCCTGCAGGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR CAA 90 bp CACCAGAATCGAATCACATACCTCCGTCTAACTAGAGCTGGTCCTCCCACATCACCCGCTCAGACTCGCTaGGCTGCCCGCAGCACTGGG +
Preference number: 3 (lower is better)
Translates to: HQNRITYLRLTRAGPPTSPAQTR*AARSTG
Trigger: CCCAGTGCTGCGGGCAGCCAAGCGAGTCTGAGCGGG...TGATGTGGGAGGACCAGCTCTAGTTAGACGGAGGTATGTGATTCGATTCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR CCA 72 bp GTGAGCCCTTGGACACATGATTCTAGCGTGATGGGATaGAGAGCGACAGCCATGGTGGGGTTCCTTGCTCCA +
Preference number: 3 (lower is better)
Translates to: VSPWTHDSSVMG*RATAMVGFLAP
Trigger: TGGAGCAAGGAACCCCACCATGGCTGTCGCTCTCCATCCCATCACGCTAGAATCATGTGTCCAAGGGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR CAA 90 bp GGGTATGCAACGCAGACACCAGACACGGCCTGGCCAAACAAGGACACTTTGTTTCACAAGGGACACTGCTaGTGCTACACTGGCAGTCAC +
Preference number: 3 (lower is better)
Translates to: GYATQTPDTAWPNKDTLFHKGHC*CYTGSH
Trigger: GTGACTGCCAGTGTAGCACAAGCAGTGTCCCTTGTG...AAACAAAGTGTCCTTGTTTGGCCAGGCCGTGTCTGGTGTCTGCGTTGCATACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR TCA 72 bp AGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGTaGAAATTCCCAAGACAAGGAGGAAGCAGTGACAGC +
Preference number: 3 (lower is better)
Translates to: SAEVWSLLSCSP*KFPRQGGSSDS
Trigger: GCTGTCACTGCTTCCTCCTTGTCTTGGGAATTTTCACGGAGAACAGCTAAGCAGAGACCACACCTCGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR GCA 72 bp CCTGTTGTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTaGTTAGCTGTTCTCCGTGAAAATTCCCAAGACAAG +
Preference number: 3 (lower is better)
Translates to: PVVLCPVPRCGL*LAVLRENSQDK
Trigger: CTTGTCTTGGGAATTTTCACGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAACAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR-3UTR CAA 90 bp CCTGAGAAGCCTTTCAAGGCACAAAGTCTCCACCAGAATCGAATCACATACCTCAAACTCCGAGTGCACTaGGTGCAGAACGGGTTTGCA +
Preference number: 3 (lower is better)
Translates to: PEKPFKAQSLHQNRITYLKLRVH*VQNGFA
Trigger: TGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTT...GAGGTATGTGATTCGATTCTGGTGGAGACTTTGTGCCTTGAAAGGCTTCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR TCA 72 bp CTTGTAGGTGGTTTGGGTGACTTTCCCGCTTCCTTCTaGATGGAGGCTGATGAGCAAGGGAAAGATGCTTTG +
Preference number: 3 (lower is better)
Translates to: LVGGLGDFPASF*MEADEQGKDAL
Trigger: CAAAGCATCTTTCCCTTGCTCATCAGCCTCCATTCAGAAGGAAGCGGGAAAGTCACCCAAACCACCTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR CCA 72 bp AGTCAATCAATTCATAGTCAGGCTCCTATCATCAAGTaGGCTTCTTTCCATGCCACTGGGCAAGGCATCTTC +
Preference number: 3 (lower is better)
Translates to: SQSIHSQAPIIK*ASFHATGQGIF
Trigger: GAAGATGCCTTGCCCAGTGGCATGGAAAGAAGCCCACTTGATGATAGGAGCCTGACTATGAATTGATTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR TCA 72 bp AAGGGACACTGCTTGTGCTACACTGGCAGTCACTTCTaGGTCAGAAAATCTTTCTTCTCCGATCACCTTCAA +
Preference number: 3 (lower is better)
Translates to: KGHCLCYTGSHF*VRKSFFSDHLQ
Trigger: TTGAAGGTGATCGGAGAAGAAAGATTTTCTGACTCAGAAGTGACTGCCAGTGTAGCACAAGCAGTGTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR GCA 72 bp GCTAGAGCTTCTTCAAGCACTTTACGGAATGTAGGATaGTATTTCCTTCATAGCTGGGGAAACAGAGGTTCC +
Preference number: 3 (lower is better)
Translates to: ARASSSTLRNVG*YFLHSWGNRGS
Trigger: GGAACCTCTGTTTCCCCAGCTATGAAGGAAATAGCATCCTACATTCCGTAAAGTGCTTGAAGAAGCTCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR CCA 72 bp CTAACTAGAGCTGGTCCTCCCACATCATCAGACAACTaGATGGAGTTTGTGGGCTGTTTAAAGCATATGGTT +
Preference number: 3 (lower is better)
Translates to: LTRAGPPTSSDN*MEFVGCLKHMV
Trigger: AACCATATGCTTTAAACAGCCCACAAACTCCATCCAGTTGTCTGATGATGTGGGAGGACCAGCTCTAGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CATACCGCCTGCCTACGGGGTCAGCTCCTGCAGGCCGATGACCCCTGTCACCCCAGCCCCACTGAGGTGTaGGCCTCCCTGGGACCTCCG +
Preference number: 4 (lower is better)
Translates to: HTACLRGQLLQADDPCHPSPTEV*ASLGPP
Trigger: CGGAGGTCCCAGGGAGGCCCACACCTCAGTGGGGCT...GGGGTGACAGGGGTCATCGGCCTGCAGGAGCTGACCCCGTAGGCAGGCGGTATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CATACCGCCTGCCTACGGGGTCAGCTCCTGCAGGCCGATGACCCCTGTCACCCCGGCTGCTGCAGCTGCTaGGGCGCTGGGGCATATTGC +
Preference number: 4 (lower is better)
Translates to: HTACLRGQLLQADDPCHPGCCSC*GAGAYC
Trigger: GCAATATGCCCCAGCGCCCCAGCAGCTGCAGCAGCC...GGGGTGACAGGGGTCATCGGCCTGCAGGAGCTGACCCCGTAGGCAGGCGGTATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CATACCGCCTGCCTACGGGGTCAGCTCCTGCAGGCCGATGACCCCTGTCACCCCGCCGGTCCACCAGGATaGGTTGGAGCTATCCAGGAC +
Preference number: 4 (lower is better)
Translates to: HTACLRGQLLQADDPCHPAGPPG*VGAIQD
Trigger: GTCCTGGATAGCTCCAACCCATCCTGGTGGACCGGC...GGGGTGACAGGGGTCATCGGCCTGCAGGAGCTGACCCCGTAGGCAGGCGGTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR CAA 72 bp ACCCCGTCCTGCCTTCACATCCCCGCTCAGACTCGCTaGGCTGCCCGCAGCACTGGGCTGCACCTTAATTCC +
Preference number: 4 (lower is better)
Translates to: TPSCLHIPAQTR*AARSTGLHLNS
Trigger: GGAATTAAGGTGCAGCCCAGTGCTGCGGGCAGCCAAGCGAGTCTGAGCGGGGATGTGAAGGCAGGACGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CATACCGCCTGCCTACGGGGTCAGCTCCTGCAGGCCGATGACCCCTGTCACCCCGGCACATATCCTTCCTaGCTCCCAAGCTCCGCCTTA +
Preference number: 4 (lower is better)
Translates to: HTACLRGQLLQADDPCHPGTYPS*LPSSAL
Trigger: TAAGGCGGAGCTTGGGAGCCAGGAAGGATATGTGCC...GGGGTGACAGGGGTCATCGGCCTGCAGGAGCTGACCCCGTAGGCAGGCGGTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CATACCGCCTGCCTACGGGGTCAGCTCCTGCAGGCCGATGACCCCTGTCACCCCTCTAGCGTGATGGGATaGAGAGCGACAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: HTACLRGQLLQADDPCHPSSVMG*RATAMV
Trigger: CACCATGGCTGTCGCTCTCCATCCCATCACGCTAGA...GGGGTGACAGGGGTCATCGGCCTGCAGGAGCTGACCCCGTAGGCAGGCGGTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CCCTGTTGTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGCCGCTCAGACTCGCTTaGCTGCCCGCAGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: PCCSVSSAEVWSLLSCSPPLRLA*LPAALG
Trigger: GCCCAGTGCTGCGGGCAGCCAAGCGAGTCTGAGCGG...CGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAACAACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR CAA 72 bp CCCACAAACTCCGAGTGCACTTGGTGCAGAACGGGTTaGCACCCGGCCTCCCCTAAGGCCCTGAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PTNSECTWCRTG*HPASPKALSFL
Trigger: GAGGAAGCTCAGGGCCTTAGGGGAGGCCGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp CAGGTGCTCCTTACTCACACTCGACTCCCTCCTGCCTCCACCAGGCTATTTTCTGCTCCTGCAGGCCGATaGCCCCTGTCACCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: QVLLTHTRLPPASTRLFSAPAGR*PLSPPG
Trigger: ACCAGGGGGTGACAGGGGTCATCGGCCTGCAGGAGC...AGAAAATAGCCTGGTGGAGGCAGGAGGGAGTCGAGTGTGAGTAAGGAGCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp GCACACCTGCAGGGGTACACACCCATACCCACAAACTCCGAGTGCACTTGGTGCGGTGCAGAACGGGTTTaGACCCGGCCTCCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: AHLQGYTPIPTNSECTWCGAERV*TRPPLR
Trigger: CCTTAGGGGAGGCCGGGTGCAAACCCGTTCTGCACC...GCACCAAGTGCACTCGGAGTTTGTGGGTATGGGTGTGTACCCCTGCAGGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp GGGTATGCAACGCAGACACCAGACACGGCCTGGCCAAACAAGGACACTTTGTTTGGCTGGTGCTGGTGCTaGTGCAGGGGAAGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: GYATQTPDTAWPNKDTLFGWCWC*CRGRVG
Trigger: CCCGACCCTTCCCCTGCAGCAGCACCAGCACCAGCC...AAACAAAGTGTCCTTGTTTGGCCAGGCCGTGTCTGGTGTCTGCGTTGCATACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CAGGTGCTCCTTACTCACACTCGACTCCCTCCTGCCTCCACCAGGCTATTTTCTGATGGAGAAGTCCCCTaGGGAGCTCTGGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: QVLLTHTRLPPASTRLFSDGEVP*GALAGP
Trigger: CGGGCCAGCCAGAGCTCCCCAGGGGACTTCTCCATC...AGAAAATAGCCTGGTGGAGGCAGGAGGGAGTCGAGTGTGAGTAAGGAGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CATACCGCCTGCCTACGGGGTCAGCTCCTGCAGGCCGATGACCCCTGTCACCCCTTGCCCTCTTTCTTGTaGGCAGCTCCAGACAAAAAG +
Preference number: 4 (lower is better)
Translates to: HTACLRGQLLQADDPCHPLPSFL*AAPDKK
Trigger: CTTTTTGTCTGGAGCTGCCCACAAGAAAGAGGGCAA...GGGGTGACAGGGGTCATCGGCCTGCAGGAGCTGACCCCGTAGGCAGGCGGTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CATACCGCCTGCCTACGGGGTCAGCTCCTGCAGGCCGATGACCCCTGTCACCCCTGGCAACAGCTTCCATaGTGTAACGTGAAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: HTACLRGQLLQADDPCHPWQQLP*CNVKLL
Trigger: CAAAAGCTTCACGTTACAGCATGGAAGCTGTTGCCA...GGGGTGACAGGGGTCATCGGCCTGCAGGAGCTGACCCCGTAGGCAGGCGGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CTTGCAGGTCAGCTAGAACGTGCCCCACCAAGTTCAACCCCACCCTGTTGTTCTCCTGCCGCCTGGAGCTaGACTGGGTCTGTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: LAGQLERAPPSSTPPCCSPAAWS*TGSVCL
Trigger: GAGACACACAGACCCAGTGCAGCTCCAGGCGGCAGG...AGAACAACAGGGTGGGGTTGAACTTGGTGGGGCACGTTCTAGCTGACCTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CATACCCACAAACTCCGAGTGCACTTGGTGCAGAACGGGTTTGCACCCGGCCTCGAACAGGAGGAGAGCTaGTCTGCAAGCCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HTHKLRVHLVQNGFAPGLEQEES*SASPPG
Trigger: ACCTGGAGGGCTTGCAGAGCAGCTCTCCTCCTGTTC...GAGGCCGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGGTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CTTGCAGGTCAGCTAGAACGTGCCCCACCAAGTTCAACCCCACCCTGTTGTTCTTACGGGGTCAGCTCCTaGAGGCCGATGACCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LAGQLERAPPSSTPPCCSYGVSS*RPMTPV
Trigger: GACAGGGGTCATCGGCCTGCAGGAGCTGACCCCGTA...AGAACAACAGGGTGGGGTTGAACTTGGTGGGGCACGTTCTAGCTGACCTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CAGGTGCTCCTTACTCACACTCGACTCCCTCCTGCCTCCACCAGGCTATTTTCTACCACCTCCCCGCTGTaGAACCCCAGCTCGTCATCC +
Preference number: 4 (lower is better)
Translates to: QVLLTHTRLPPASTRLFSTTSPL*NPSSSS
Trigger: GGATGACGAGCTGGGGTTCCACAGCGGGGAGGTGGT...AGAAAATAGCCTGGTGGAGGCAGGAGGGAGTCGAGTGTGAGTAAGGAGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp ACCTCCAGAGTGAGCCCTTGGACACATGATTCTAGCGTGATGGGATGGAGAGCGTCTCCAACCCCGTCCTaGCTTCACATCCCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: TSRVSPWTHDSSVMGWRASPTPS*LHIPAQ
Trigger: CTGAGCGGGGATGTGAAGGCAGGACGGGGTTGGAGA...CGCTCTCCATCCCATCACGCTAGAATCATGTGTCCAAGGGCTCACTCTGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp GCACACCTGCAGGGGTACACACCCATACCCACAAACTCCGAGTGCACTTGGTGCGTTCCTTGCTCCAGGTaGAACTCTTGGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AHLQGYTPIPTNSECTWCVPCSR*NSWAAG
Trigger: TCCTGCTGCCCAAGAGTTGCACCTGGAGCAAGGAAC...GCACCAAGTGCACTCGGAGTTTGTGGGTATGGGTGTGTACCCCTGCAGGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CTTCCAAAAGCTGCAGGTGCTCCTTACTCACACTCGACTCCCTCCTGCCTCCACTCCGAGTGCACTTGGTaGAGAACGGGTTTGCACCCG +
Preference number: 4 (lower is better)
Translates to: LPKAAGAPYSHSTPSCLHSECTW*RTGLHP
Trigger: CGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGA...GTGGAGGCAGGAGGGAGTCGAGTGTGAGTAAGGAGCACCTGCAGCTTTTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CCCTGTTGTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGCTGTGCCTCTCACGCTaGCCCTTGATCCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: PCCSVSSAEVWSLLSCSPLCLSR*PLILLD
Trigger: ATCCAGGAGGATCAAGGGGCAGCGTGAGAGGCACAG...CGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAACAACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CATACCCACAAACTCCGAGTGCACTTGGTGCAGAACGGGTTTGCACCCGGCCTCTCCACCAGGATGGGTTaGAGCTATCCAGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: HTHKLRVHLVQNGFAPGLSTRMG*SYPGPP
Trigger: TGGAGGTCCTGGATAGCTCCAACCCATCCTGGTGGA...GAGGCCGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CAGGTGCTCCTTACTCACACTCGACTCCCTCCTGCCTCCACCAGGCTATTTTCTGGAGAGCGACAGCCATaGTGGGGTTCCTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: QVLLTHTRLPPASTRLFSGERQP*WGSLLQ
Trigger: CTGGAGCAAGGAACCCCACCATGGCTGTCGCTCTCC...AGAAAATAGCCTGGTGGAGGCAGGAGGGAGTCGAGTGTGAGTAAGGAGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp GGGTATGCAACGCAGACACCAGACACGGCCTGGCCAAACAAGGACACTTTGTTTCACCGTTCTCTTCCCTaGCCCCACTCACCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GYATQTPDTAWPNKDTLFHRSLP*PHSPSP
Trigger: GGGAGAGGGTGAGTGGGGCCAGGGAAGAGAACGGTG...AAACAAAGTGTCCTTGTTTGGCCAGGCCGTGTCTGGTGTCTGCGTTGCATACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp GCACACCTGCAGGGGTACACACCCATACCCACAAACTCCGAGTGCACTTGGTGCACCCCTGTCACCCCCTaGTCTCGTTCTCACTCTCTA +
Preference number: 4 (lower is better)
Translates to: AHLQGYTPIPTNSECTWCTPVTP*SRSHSL
Trigger: TAGAGAGTGAGAACGAGACCAGGGGGTGACAGGGGT...GCACCAAGTGCACTCGGAGTTTGTGGGTATGGGTGTGTACCCCTGCAGGTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp CATACCCACAAACTCCGAGTGCACTTGGTGCAGAACGGGTTTGCACCCGGCCTCCGAGAGAGGCCTTCGTaGAACCATTTGGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: HTHKLRVHLVQNGFAPGLRERPS*NHLGNW
Trigger: CCAGTTTCCCAAATGGTTTCACGAAGGCCTCTCTCG...GAGGCCGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp CTTGCAGGTCAGCTAGAACGTGCCCCACCAAGTTCAACCCCACCCTGTTGTTCTCCTCCCCTAAGGCCCTaGGCTTCCTCTCTACTGTCT +
Preference number: 4 (lower is better)
Translates to: LAGQLERAPPSSTPPCCSPPLRP*ASSLLS
Trigger: AGACAGTAGAGAGGAAGCTCAGGGCCTTAGGGGAGG...AGAACAACAGGGTGGGGTTGAACTTGGTGGGGCACGTTCTAGCTGACCTGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CCCTGTTGTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGCCCACAAACTCCGAGTaGACTTGGTGCAGAACGGGT +
Preference number: 4 (lower is better)
Translates to: PCCSVSSAEVWSLLSCSPPTNSE*TWCRTG
Trigger: ACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGG...CGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAACAACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CACCAGAATCGAATCACATACCTCCGTCTAACTAGAGCTGGTCCTCCCACATCAACTCGCCCTGCCGCCTaGAGCTGCACTGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: HQNRITYLRLTRAGPPTSTRPAA*SCTGSV
Trigger: CACAGACCCAGTGCAGCTCCAGGCGGCAGGGCGAGT...TGATGTGGGAGGACCAGCTCTAGTTAGACGGAGGTATGTGATTCGATTCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CATACCCACAAACTCCGAGTGCACTTGGTGCAGAACGGGTTTGCACCCGGCCTCGAGTTTATCGGGTCATaGGTGCCACGTAGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: HTHKLRVHLVQNGFAPGLEFIGS*VPRSWQ
Trigger: CTGCCAACTACGTGGCACCCATGACCCGATAAACTC...GAGGCCGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp AGAACGGGTTTGCACCCGGCCTCCCCTAAGGCCCTGAGCTTCCTCTCTACTGTCCCTCACCTGAAGCAGTaGAATCAAACTTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: RTGLHPASPKALSFLSTVPHLKQ*NQTWQQ
Trigger: CTGTTGCCAAGTTTGATTTCACTGCTTCAGGTGAGG...GACAGTAGAGAGGAAGCTCAGGGCCTTAGGGGAGGCCGGGTGCAAACCCGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp CCCTGTTGTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGTGTGTCTCCGATGCATaGGGGCCGCATTCATTTCAC +
Preference number: 4 (lower is better)
Translates to: PCCSVSSAEVWSLLSCSPCVSDA*GPHSFH
Trigger: GTGAAATGAATGCGGCCCTCATGCATCGGAGACACA...CGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAACAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp CCTGAGAAGCCTTTCAAGGCACAAAGTCTCCACCAGAATCGAATCACATACCTCTGCAAGCCCTCCAGGTaGGCGGGGCTTGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PEKPFKAQSLHQNRITYLCKPSR*AGLAGQ
Trigger: CTGACCTGCAAGCCCCGCTCACCTGGAGGGCTTGCA...GAGGTATGTGATTCGATTCTGGTGGAGACTTTGTGCCTTGAAAGGCTTCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp CTTCCAAAAGCTGCAGGTGCTCCTTACTCACACTCGACTCCCTCCTGCCTCCACTTCTCACTCTCTACCTaGGGGGTATGCAACGCAGAC +
Preference number: 4 (lower is better)
Translates to: LPKAAGAPYSHSTPSCLHFSLST*GVCNAD
Trigger: GTCTGCGTTGCATACCCCTCAGGTAGAGAGTGAGAA...GTGGAGGCAGGAGGGAGTCGAGTGTGAGTAAGGAGCACCTGCAGCTTTTGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CCCTGTTGTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGCCGCATTCATTTCACTaGCCAAGCCGGTGCCACAAT +
Preference number: 4 (lower is better)
Translates to: PCCSVSSAEVWSLLSCSPPHSFH*PSRCHN
Trigger: ATTGTGGCACCGGCTTGGGCAGTGAAATGAATGCGG...CGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAACAACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp ACAGAGGTTCCACTGAGTAAGCTGCTTGGGGATTGTGGAAAATCCCTCGATTTCAGGCCCAGCTTGTTGTaGAGGCGGCCGGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: TEVPLSKLLGDCGKSLDFRPSLL*RRPVHQ
Trigger: CTGGTGGACCGGCCGCCTGCACAACAAGCTGGGCCT...GAAATCGAGGGATTTTCCACAATCCCCAAGCAGCTTACTCAGTGGAACCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CACCAGAATCGAATCACATACCTCCGTCTAACTAGAGCTGGTCCTCCCACATCATCAGACTCGCTTGGCTaGCCGCAGCACTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: HQNRITYLRLTRAGPPTSSDSLG*PQHWAA
Trigger: TGCAGCCCAGTGCTGCGGGCAGCCAAGCGAGTCTGA...TGATGTGGGAGGACCAGCTCTAGTTAGACGGAGGTATGTGATTCGATTCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CCCTGTTGTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGGTGGGCTTCTTTCCATaGCACTGGGCAAGGCATCTT +
Preference number: 4 (lower is better)
Translates to: PCCSVSSAEVWSLLSCSPVGFFP*HWARHL
Trigger: AAGATGCCTTGCCCAGTGGCATGGAAAGAAGCCCAC...CGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAACAACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp GGCTGCACCTTAATTCCTAATGCAACAGTGCCCACCCCTTGGAGAACAGGAGGAACCTTCAATAACGGCTaGCCCCAACCCCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: GCTLIPNATVPTPWRTGGTFNNG*PQPHPS
Trigger: GGAGGGATGGGGTTGGGGGCAGCCGTTATTGAAGGT...TCCTCCTGTTCTCCAAGGGGTGGGCACTGTTGCATTAGGAATTAAGGTGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp GTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGTGAAAATTCTGCTCATACCGCCTaGCTACGGGGTCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VLCPVPRCGLCLAVLRENSAHTA*LRGQLL
Trigger: CAGGAGCTGACCCCGTAGGCAGGCGGTATGAGCAGA...ATTTTCACGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CTTCCAAAAGCTGCAGGTGCTCCTTACTCACACTCGACTCCCTCCTGCCTCCACTCCTGGTGGAAATGGTaGTGCTGCAGATATCGCTGC +
Preference number: 4 (lower is better)
Translates to: LPKAAGAPYSHSTPSCLHSWWKW*CCRYRC
Trigger: GCAGCGATATCTGCAGCACCACCATTTCCACCAGGA...GTGGAGGCAGGAGGGAGTCGAGTGTGAGTAAGGAGCACCTGCAGCTTTTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp GTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGTGAAAATCGCCTGGAGCTGCACTaGGTCTGTGTGTCTCCGATG +
Preference number: 4 (lower is better)
Translates to: VLCPVPRCGLCLAVLRENRLELH*VCVSPM
Trigger: CATCGGAGACACACAGACCCAGTGCAGCTCCAGGCG...ATTTTCACGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp ACAGAGGTTCCACTGAGTAAGCTGCTTGGGGATTGTGGAAAATCCCTCGATTTCAGGCTGTTGCCCCGGTaGCCCTGGTCTTCTCGGGTT +
Preference number: 4 (lower is better)
Translates to: TEVPLSKLLGDCGKSLDFRLLPR*PWSSRV
Trigger: AACCCGAGAAGACCAGGGTCACCGGGGCAACAGCCT...GAAATCGAGGGATTTTCCACAATCCCCAAGCAGCTTACTCAGTGGAACCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CAGGTGCTCCTTACTCACACTCGACTCCCTCCTGCCTCCACCAGGCTATTTTCTCCGAGGTGTGGTCTCTaGTTAGCTGTTCTCCGTGAA +
Preference number: 4 (lower is better)
Translates to: QVLLTHTRLPPASTRLFSPRCGL*LAVLRE
Trigger: TTCACGGAGAACAGCTAAGCAGAGACCACACCTCGG...AGAAAATAGCCTGGTGGAGGCAGGAGGGAGTCGAGTGTGAGTAAGGAGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp GGCTGCACCTTAATTCCTAATGCAACAGTGCCCACCCCTTGGAGAACAGGAGGAAGGTCAGCTAGAACGTaGCCCACCAAGTTCAACCCC +
Preference number: 4 (lower is better)
Translates to: GCTLIPNATVPTPWRTGGRSART*PTKFNP
Trigger: GGGGTTGAACTTGGTGGGGCACGTTCTAGCTGACCT...TCCTCCTGTTCTCCAAGGGGTGGGCACTGTTGCATTAGGAATTAAGGTGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CTTCCAAAAGCTGCAGGTGCTCCTTACTCACACTCGACTCCCTCCTGCCTCCACTTCCTAATGCAACAGTaGCCACCCCTTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: LPKAAGAPYSHSTPSCLHFLMQQ*PPLGEQ
Trigger: CTGTTCTCCAAGGGGTGGGCACTGTTGCATTAGGAA...GTGGAGGCAGGAGGGAGTCGAGTGTGAGTAAGGAGCACCTGCAGCTTTTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp ACCTCCAGAGTGAGCCCTTGGACACATGATTCTAGCGTGATGGGATGGAGAGCGACACATGTGCACACCTaGAGGGGTACACACCCATAC +
Preference number: 4 (lower is better)
Translates to: TSRVSPWTHDSSVMGWRATHVHT*RGTHPY
Trigger: GTATGGGTGTGTACCCCTGCAGGTGTGCACATGTGT...CGCTCTCCATCCCATCACGCTAGAATCATGTGTCCAAGGGCTCACTCTGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp GCACACCTGCAGGGGTACACACCCATACCCACAAACTCCGAGTGCACTTGGTGCGAGTGCACAAATATGTaGGTGCAAGCACACATGTGC +
Preference number: 4 (lower is better)
Translates to: AHLQGYTPIPTNSECTWCECTNM*VQAHMC
Trigger: GCACATGTGTGCTTGCACGCACATATTTGTGCACTC...GCACCAAGTGCACTCGGAGTTTGTGGGTATGGGTGTGTACCCCTGCAGGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp ACAGAGGTTCCACTGAGTAAGCTGCTTGGGGATTGTGGAAAATCCCTCGATTTCGCCCAGCCCTCCTCCTaGACCATCTGCCCACCAACT +
Preference number: 4 (lower is better)
Translates to: TEVPLSKLLGDCGKSLDFAQPSS*TICPPT
Trigger: AGTTGGTGGGCAGATGGTGCAGGAGGAGGGCTGGGC...GAAATCGAGGGATTTTCCACAATCCCCAAGCAGCTTACTCAGTGGAACCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CCCTGTTGTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGCTTGTCCTCTTTACCTaGCCGCTAAGAGCCCTCATT +
Preference number: 4 (lower is better)
Translates to: PCCSVSSAEVWSLLSCSPLVLFT*PLRALI
Trigger: AATGAGGGCTCTTAGCGGCCAGGTAAAGAGGACAAG...CGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAACAACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
3UTR CAA 72 bp GCTCTCTTTCCCCCTCCCCTCCATAATGTGGACAGTTaGGTTCTTGTCCTCTTTACCTGGCCGCTAAGAGCC +
Preference number: 4 (lower is better)
Translates to: ALFPPPLHNVDS*VLVLFTWPLRA
Trigger: GGCTCTTAGCGGCCAGGTAAAGAGGACAAGAACCAAACTGTCCACATTATGGAGGGGAGGGGGAAAGAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp CATACCCACAAACTCCGAGTGCACTTGGTGCAGAACGGGTTTGCACCCGGCCTCTTCCATGTACCACTCTaGAAGAGGGTGCAAGTTTAC +
Preference number: 4 (lower is better)
Translates to: HTHKLRVHLVQNGFAPGLFHVPL*KRVQVY
Trigger: GTAAACTTGCACCCTCTTTCAGAGTGGTACATGGAA...GAGGCCGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp GCACACCTGCAGGGGTACACACCCATACCCACAAACTCCGAGTGCACTTGGTGCTGGAAGAGAAGGGGTTaGGTTTATGTCTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: AHLQGYTPIPTNSECTWCWKRRG*VYVLAL
Trigger: CAAAGCCAAGACATAAACTCAACCCCTTCTCTTCCA...GCACCAAGTGCACTCGGAGTTTGTGGGTATGGGTGTGTACCCCTGCAGGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp CATACCCACAAACTCCGAGTGCACTTGGTGCAGAACGGGTTTGCACCCGGCCTCTTCCATGCTGTAACGTaGAGCTTTTGGAAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HTHKLRVHLVQNGFAPGLFHAVT*SFWKRR
Trigger: CCTTCTCTTCCAAAAGCTTCACGTTACAGCATGGAA...GAGGCCGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp GCACACCTGCAGGGGTACACACCCATACCCACAAACTCCGAGTGCACTTGGTGCCTTAGCTGTTCTCCGTaGAAATTCCCAAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: AHLQGYTPIPTNSECTWCLSCSP*KFPRQG
Trigger: TCCTTGTCTTGGGAATTTTCACGGAGAACAGCTAAG...GCACCAAGTGCACTCGGAGTTTGTGGGTATGGGTGTGTACCCCTGCAGGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp CCCTGTTGTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGAAACAGAGGTTCCACTaGGTAAGCTGCTTGGGGATT +
Preference number: 4 (lower is better)
Translates to: PCCSVSSAEVWSLLSCSPKQRFH*VSCLGI
Trigger: AATCCCCAAGCAGCTTACTCAGTGGAACCTCTGTTT...CGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAACAACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp GGGTATGCAACGCAGACACCAGACACGGCCTGGCCAAACAAGGACACTTTGTTTTGTGCACCTCCAGAGTaGGCCCTTGGACACATGATT +
Preference number: 4 (lower is better)
Translates to: GYATQTPDTAWPNKDTLFCAPPE*ALGHMI
Trigger: AATCATGTGTCCAAGGGCTCACTCTGGAGGTGCACA...AAACAAAGTGTCCTTGTTTGGCCAGGCCGTGTCTGGTGTCTGCGTTGCATACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp CAGGTGCTCCTTACTCACACTCGACTCCCTCCTGCCTCCACCAGGCTATTTTCTTTTCCCGCTTCCTTCTaGATGGAGGCTGATGAGCAA +
Preference number: 4 (lower is better)
Translates to: QVLLTHTRLPPASTRLFSFPASF*MEADEQ
Trigger: TTGCTCATCAGCCTCCATTCAGAAGGAAGCGGGAAA...AGAAAATAGCCTGGTGGAGGCAGGAGGGAGTCGAGTGTGAGTAAGGAGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp ACCTCCAGAGTGAGCCCTTGGACACATGATTCTAGCGTGATGGGATGGAGAGCGTGGTGGAAATGGTGGTaGTGCAGATATCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TSRVSPWTHDSSVMGWRAWWKWW*CRYRCC
Trigger: ACAGCAGCGATATCTGCAGCACCACCATTTCCACCA...CGCTCTCCATCCCATCACGCTAGAATCATGTGTCCAAGGGCTCACTCTGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp GGGTATGCAACGCAGACACCAGACACGGCCTGGCCAAACAAGGACACTTTGTTTTTATCGGGTCATGGGTaGCACGTAGTTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GYATQTPDTAWPNKDTLFLSGHG*HVVGRE
Trigger: TTCCCTGCCAACTACGTGGCACCCATGACCCGATAA...AAACAAAGTGTCCTTGTTTGGCCAGGCCGTGTCTGGTGTCTGCGTTGCATACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp GGGTATGCAACGCAGACACCAGACACGGCCTGGCCAAACAAGGACACTTTGTTTCCCGCAGCACTGGGCTaGACCTTAATTCCTAATGCA +
Preference number: 4 (lower is better)
Translates to: GYATQTPDTAWPNKDTLFPAALG*TLIPNA
Trigger: TGCATTAGGAATTAAGGTGCAGCCCAGTGCTGCGGG...AAACAAAGTGTCCTTGTTTGGCCAGGCCGTGTCTGGTGTCTGCGTTGCATACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CAGGTGCTCCTTACTCACACTCGACTCCCTCCTGCCTCCACCAGGCTATTTTCTAGTCACAAGGGACACTaGTTGTGCTACACTGGCAGT +
Preference number: 4 (lower is better)
Translates to: QVLLTHTRLPPASTRLFSSHKGH*LCYTGS
Trigger: ACTGCCAGTGTAGCACAAGCAGTGTCCCTTGTGACT...AGAAAATAGCCTGGTGGAGGCAGGAGGGAGTCGAGTGTGAGTAAGGAGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CATACCCACAAACTCCGAGTGCACTTGGTGCAGAACGGGTTTGCACCCGGCCTCCTCTTCAGTAGCTTTTaGTACAACAGAACACCGAGC +
Preference number: 4 (lower is better)
Translates to: HTHKLRVHLVQNGFAPGLLFSSF*YNRTPS
Trigger: GCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAG...GAGGCCGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp TCTGAATGGAGGCTGATGAGCAAGGGAAAGATGCTTTGGCATCTCAGTACAAAATCCGGTCCAGGCTGTTaGCCCGGTGACCCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SEWRLMSKGKMLWHLSTKSGPGC*PGDPGL
Trigger: AAGACCAGGGTCACCGGGGCAACAGCCTGGACCGGA...TTTTGTACTGAGATGCCAAAGCATCTTTCCCTTGCTCATCAGCCTCCATTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp GGCTGCACCTTAATTCCTAATGCAACAGTGCCCACCCCTTGGAGAACAGGAGGATCTGTGTGTCTCCGATaGATGAGGGCCGCATTCATT +
Preference number: 4 (lower is better)
Translates to: GCTLIPNATVPTPWRTGGSVCLR*MRAAFI
Trigger: AATGAATGCGGCCCTCATGCATCGGAGACACACAGA...TCCTCCTGTTCTCCAAGGGGTGGGCACTGTTGCATTAGGAATTAAGGTGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp GTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGTGAAAATAGTAAGTTCTCTGCCTaGTGTCGAGAGAGGCCTTCG +
Preference number: 4 (lower is better)
Translates to: VLCPVPRCGLCLAVLRENSKFSA*CRERPS
Trigger: CGAAGGCCTCTCTCGACACCAGGCAGAGAACTTACT...ATTTTCACGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp GTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGTGAAAATACACCAGACACGGCCTaGCCAAACAAGGACACTTTG +
Preference number: 4 (lower is better)
Translates to: VLCPVPRCGLCLAVLRENTPDTA*PNKDTL
Trigger: CAAAGTGTCCTTGTTTGGCCAGGCCGTGTCTGGTGT...ATTTTCACGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp GGGTATGCAACGCAGACACCAGACACGGCCTGGCCAAACAAGGACACTTTGTTTATGACCTTGAAGTGTTaGACGTCATCCTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: GYATQTPDTAWPNKDTLFMTLKC*TSSSCL
Trigger: CAGGCATGAGGATGACGTTCAACACTTCAAGGTCAT...AAACAAAGTGTCCTTGTTTGGCCAGGCCGTGTCTGGTGTCTGCGTTGCATACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp CCCTGTTGTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGTTATTACTGCTTTCCTaGGAAGCCTTTCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: PCCSVSSAEVWSLLSCSPLLLLS*EAFQGT
Trigger: TGTGCCTTGAAAGGCTTCTCAGGAAAGCAGTAATAA...CGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAACAACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp TCTGAATGGAGGCTGATGAGCAAGGGAAAGATGCTTTGGCATCTCAGTACAAAACAGGTGAGCGGGGCTTaGAGGTCAGCTAGAACGTGC +
Preference number: 4 (lower is better)
Translates to: SEWRLMSKGKMLWHLSTKQVSGA*RSARTC
Trigger: GCACGTTCTAGCTGACCTGCAAGCCCCGCTCACCTG...TTTTGTACTGAGATGCCAAAGCATCTTTCCCTTGCTCATCAGCCTCCATTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp GTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGTGAAAATTTCCTTATGCTTCTTTaGTCCCTGCCTTCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: VLCPVPRCGLCLAVLRENFLMLL*SLPSAA
Trigger: TGCTGCGGAAGGCAGGGAGCAAAGAAGCATAAGGAA...ATTTTCACGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CACCAGAATCGAATCACATACCTCCGTCTAACTAGAGCTGGTCCTCCCACATCATCCAGTGCCGAGGTGTaGTCTCTGCTTAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: HQNRITYLRLTRAGPPTSSSAEV*SLLSCS
Trigger: AGAACAGCTAAGCAGAGACCACACCTCGGCACTGGA...TGATGTGGGAGGACCAGCTCTAGTTAGACGGAGGTATGTGATTCGATTCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp CATACCCACAAACTCCGAGTGCACTTGGTGCAGAACGGGTTTGCACCCGGCCTCTTTATGTCTTGGCTTTaGCACCGAGTTATTAGAATC +
Preference number: 4 (lower is better)
Translates to: HTHKLRVHLVQNGFAPGLFMSWL*HRVIRI
Trigger: GATTCTAATAACTCGGTGTCAAAGCCAAGACATAAA...GAGGCCGGGTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTTGTGGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp ACCTCCAGAGTGAGCCCTTGGACACATGATTCTAGCGTGATGGGATGGAGAGCGCAGTTCATCCTCACCTaGAGCAGTGAAATCAAACTT +
Preference number: 4 (lower is better)
Translates to: TSRVSPWTHDSSVMGWRAQFILT*SSEIKL
Trigger: AAGTTTGATTTCACTGCTTCAGGTGAGGATGAACTG...CGCTCTCCATCCCATCACGCTAGAATCATGTGTCCAAGGGCTCACTCTGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp ACCTCCAGAGTGAGCCCTTGGACACATGATTCTAGCGTGATGGGATGGAGAGCGAAAACATCTCCAGTGTaGAAGCTCAGTTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: TSRVSPWTHDSSVMGWRAKTSPV*KLSSSS
Trigger: TGAGGATGAACTGAGCTTTCACACTGGAGATGTTTT...CGCTCTCCATCCCATCACGCTAGAATCATGTGTCCAAGGGCTCACTCTGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp CCTGAGAAGCCTTTCAAGGCACAAAGTCTCCACCAGAATCGAATCACATACCTCCAACCTCCTTGCCCATaGGTAAGTTCTCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PEKPFKAQSLHQNRITYLQPPCP*VSSLPG
Trigger: ACCAGGCAGAGAACTTACTCATGGGCAAGGAGGTTG...GAGGTATGTGATTCGATTCTGGTGGAGACTTTGTGCCTTGAAAGGCTTCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp CCTGAGAAGCCTTTCAAGGCACAAAGTCTCCACCAGAATCGAATCACATACCTCCACATGATTCTAGCGTaGTGGGATGGAGAGCGACAG +
Preference number: 4 (lower is better)
Translates to: PEKPFKAQSLHQNRITYLHMILA*WDGERQ
Trigger: CTGTCGCTCTCCATCCCATCACGCTAGAATCATGTG...GAGGTATGTGATTCGATTCTGGTGGAGACTTTGTGCCTTGAAAGGCTTCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp CAGGTGCTCCTTACTCACACTCGACTCCCTCCTGCCTCCACCAGGCTATTTTCTACTGGCAGTCACTTCTaGGTCAGAAAATCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QVLLTHTRLPPASTRLFSTGSHF*VRKSFF
Trigger: GAAGAAAGATTTTCTGACTCAGAAGTGACTGCCAGT...AGAAAATAGCCTGGTGGAGGCAGGAGGGAGTCGAGTGTGAGTAAGGAGCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp ACCTCCAGAGTGAGCCCTTGGACACATGATTCTAGCGTGATGGGATGGAGAGCGTATGGATCCACTTTGTaGTGTCTTCCATGTACCACT +
Preference number: 4 (lower is better)
Translates to: TSRVSPWTHDSSVMGWRAYGSTL*CLPCTT
Trigger: AGTGGTACATGGAAGACAGCACAAAGTGGATCCATA...CGCTCTCCATCCCATCACGCTAGAATCATGTGTCCAAGGGCTCACTCTGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp ACAGAGGTTCCACTGAGTAAGCTGCTTGGGGATTGTGGAAAATCCCTCGATTTCCACTGCCCAAGCCGGTaGCACAATGCCCATCATTTA +
Preference number: 4 (lower is better)
Translates to: TEVPLSKLLGDCGKSLDFHCPSR*HNAHHL
Trigger: TAAATGATGGGCATTGTGGCACCGGCTTGGGCAGTG...GAAATCGAGGGATTTTCCACAATCCCCAAGCAGCTTACTCAGTGGAACCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCATCCCAACTCCCCCACTaGCTTCCACACACCCCTGAG +
Preference number: 4 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPSQLPH*LPHTPE
Trigger: CTCAGGGGTGTGTGGAAGGCAGTGGGGGAGTTGGGA...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CCCTGTTGTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGTTACGGAATGTAGGATaGTATTTCCTTCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: PCCSVSSAEVWSLLSCSPLRNVG*YFLHSW
Trigger: CCAGCTATGAAGGAAATAGCATCCTACATTCCGTAA...CGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAACAACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp ACAGAGGTTCCACTGAGTAAGCTGCTTGGGGATTGTGGAAAATCCCTCGATTTCCAGCAGCGGTTTCTCTaGTCTGATTCTTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TEVPLSKLLGDCGKSLDFQQRFL*SDSSSP
Trigger: GGGAGAGGAAGAATCAGAGCAGAGAAACCGCTGCTG...GAAATCGAGGGATTTTCCACAATCCCCAAGCAGCTTACTCAGTGGAACCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CAGGTGCTCCTTACTCACACTCGACTCCCTCCTGCCTCCACCAGGCTATTTTCTGCTTCTGTCTGGAGATaGAATTTGTCCTGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: QVLLTHTRLPPASTRLFSASVWR*NLSCSS
Trigger: ACTACTACAGGACAAATTCCATCTCCAGACAGAAGC...AGAAAATAGCCTGGTGGAGGCAGGAGGGAGTCGAGTGTGAGTAAGGAGCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCAGAGCGACAGCCATGGTaGGGTTCCTTGCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPERQPW*GSLLQV
Trigger: CACCTGGAGCAAGGAACCCCACCATGGCTGTCGCTC...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp ACAGAGGTTCCACTGAGTAAGCTGCTTGGGGATTGTGGAAAATCCCTCGATTTCAACTCCGAGTGCACTTaGTGCAGAACGGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: TEVPLSKLLGDCGKSLDFNSECT*CRTGLH
Trigger: GTGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTT...GAAATCGAGGGATTTTCCACAATCCCCAAGCAGCTTACTCAGTGGAACCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp GGGTATGCAACGCAGACACCAGACACGGCCTGGCCAAACAAGGACACTTTGTTTACATCATCAGACAACTaGATGGAGTTTGTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GYATQTPDTAWPNKDTLFTSSDN*MEFVGC
Trigger: ACAGCCCACAAACTCCATCCAGTTGTCTGATGATGT...AAACAAAGTGTCCTTGTTTGGCCAGGCCGTGTCTGGTGTCTGCGTTGCATACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp GCACACCTGCAGGGGTACACACCCATACCCACAAACTCCGAGTGCACTTGGTGCAAGGGAAAGATGCTTTaGCATCTCAGTACAAAATAC +
Preference number: 4 (lower is better)
Translates to: AHLQGYTPIPTNSECTWCKGKML*HLSTKY
Trigger: GTATTTTGTACTGAGATGCCAAAGCATCTTTCCCTT...GCACCAAGTGCACTCGGAGTTTGTGGGTATGGGTGTGTACCCCTGCAGGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp ACAGAGGTTCCACTGAGTAAGCTGCTTGGGGATTGTGGAAAATCCCTCGATTTCCCGCTTCCTTCTGAATaGAGGCTGATGAGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: TEVPLSKLLGDCGKSLDFPLPSE*RLMSKG
Trigger: TCCCTTGCTCATCAGCCTCCATTCAGAAGGAAGCGG...GAAATCGAGGGATTTTCCACAATCCCCAAGCAGCTTACTCAGTGGAACCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp TCTGAATGGAGGCTGATGAGCAAGGGAAAGATGCTTTGGCATCTCAGTACAAAAGGAAGCAGTGACAGCTaGAGGCCAGGACAAAACTCC +
Preference number: 4 (lower is better)
Translates to: SEWRLMSKGKMLWHLSTKGSSDS*RPGQNS
Trigger: GGAGTTTTGTCCTGGCCTTCAGCTGTCACTGCTTCC...TTTTGTACTGAGATGCCAAAGCATCTTTCCCTTGCTCATCAGCCTCCATTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp ACCTCCAGAGTGAGCCCTTGGACACATGATTCTAGCGTGATGGGATGGAGAGCGAAGCATCAGAGTTACTaGATTTCAGAGTATGGATCC +
Preference number: 4 (lower is better)
Translates to: TSRVSPWTHDSSVMGWRAKHQSY*ISEYGS
Trigger: GGATCCATACTCTGAAATGCAGTAACTCTGATGCTT...CGCTCTCCATCCCATCACGCTAGAATCATGTGTCCAAGGGCTCACTCTGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CACCAGAATCGAATCACATACCTCCGTCTAACTAGAGCTGGTCCTCCCACATCAAAGCCGGTGCCACAATaGCCATCATTTATGTCAAGG +
Preference number: 4 (lower is better)
Translates to: HQNRITYLRLTRAGPPTSKPVPQ*PSFMSR
Trigger: CCTTGACATAAATGATGGGCATTGTGGCACCGGCTT...TGATGTGGGAGGACCAGCTCTAGTTAGACGGAGGTATGTGATTCGATTCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CCTGAGAAGCCTTTCAAGGCACAAAGTCTCCACCAGAATCGAATCACATACCTCAAGGGACACTGCTTGTaGTACACTGGCAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: PEKPFKAQSLHQNRITYLKGHCL*YTGSHF
Trigger: GAAGTGACTGCCAGTGTAGCACAAGCAGTGTCCCTT...GAGGTATGTGATTCGATTCTGGTGGAGACTTTGTGCCTTGAAAGGCTTCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCAATATTGCGGAGGCTGTaGCTGGTGCTGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPILRRL*LVLVLL
Trigger: CAGCAGCACCAGCACCAGCCACAGCCTCCGCAATAT...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCAACAGTGCCCACCCCTTaGAGAACAGGAGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPTVPTP*RTGGEL
Trigger: CAGCTCTCCTCCTGTTCTCCAAGGGGTGGGCACTGT...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCATCCAGGTGCAACTCTTaGGCAGCAGGAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPSRCNS*AAGGQQ
Trigger: CTGCTGTCCTCCTGCTGCCCAAGAGTTGCACCTGGA...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp CCTGAGAAGCCTTTCAAGGCACAAAGTCTCCACCAGAATCGAATCACATACCTCAAAGCTTCTGTCCCCTaGAGAGTTTATCGGGTCATG +
Preference number: 4 (lower is better)
Translates to: PEKPFKAQSLHQNRITYLKASVP*RVYRVM
Trigger: CATGACCCGATAAACTCTTCAGGGGACAGAAGCTTT...GAGGTATGTGATTCGATTCTGGTGGAGACTTTGTGCCTTGAAAGGCTTCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp TCTGAATGGAGGCTGATGAGCAAGGGAAAGATGCTTTGGCATCTCAGTACAAAACATTTATGTCAAGGCTaGCTCCTCGGCGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SEWRLMSKGKMLWHLSTKHLCQG*LLGVPG
Trigger: ACCAGGAACGCCGAGGAGGCAGCCTTGACATAAATG...TTTTGTACTGAGATGCCAAAGCATCTTTCCCTTGCTCATCAGCCTCCATTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp TCTGAATGGAGGCTGATGAGCAAGGGAAAGATGCTTTGGCATCTCAGTACAAAATTGTTCTGTGTCCAGTaGCGAGGTGTGGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SEWRLMSKGKMLWHLSTKLFCVQ*RGVVSA
Trigger: AGCAGAGACCACACCTCGGCACTGGACACAGAACAA...TTTTGTACTGAGATGCCAAAGCATCTTTCCCTTGCTCATCAGCCTCCATTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCAGTGCAAGCACACATGTaGACACCTGCAGGGGTACAC +
Preference number: 4 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPVQAHM*TPAGVH
Trigger: GTGTACCCCTGCAGGTGTGCACATGTGTGCTTGCAC...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp GTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGTGAAAATATATTATTCTCCACCTaGGTTCCCTTTTGCATCAAC +
Preference number: 4 (lower is better)
Translates to: VLCPVPRCGLCLAVLRENILFST*VPFCIN
Trigger: GTTGATGCAAAAGGGAACTCAGGTGGAGAATAATAT...ATTTTCACGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp ACCTCCAGAGTGAGCCCTTGGACACATGATTCTAGCGTGATGGGATGGAGAGCGAACCATTTGGGAAACTaGATGTCTATGAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: TSRVSPWTHDSSVMGWRANHLGN*MSMKFL
Trigger: CAAGAATTTCATAGACATCCAGTTTCCCAAATGGTT...CGCTCTCCATCCCATCACGCTAGAATCATGTGTCCAAGGGCTCACTCTGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CACCAGAATCGAATCACATACCTCCGTCTAACTAGAGCTGGTCCTCCCACATCATATTTCCTTCATAGCTaGGGAAACAGAGGTTCCACT +
Preference number: 4 (lower is better)
Translates to: HQNRITYLRLTRAGPPTSYFLHS*GNRGST
Trigger: AGTGGAACCTCTGTTTCCCCAGCTATGAAGGAAATA...TGATGTGGGAGGACCAGCTCTAGTTAGACGGAGGTATGTGATTCGATTCTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp TCTGAATGGAGGCTGATGAGCAAGGGAAAGATGCTTTGGCATCTCAGTACAAAATCCAGAGTGAGCCCTTaGACACATGATTCTAGCGTG +
Preference number: 4 (lower is better)
Translates to: SEWRLMSKGKMLWHLSTKSRVSP*THDSSV
Trigger: CACGCTAGAATCATGTGTCCAAGGGCTCACTCTGGA...TTTTGTACTGAGATGCCAAAGCATCTTTCCCTTGCTCATCAGCCTCCATTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCATCCAAAAGCTGCAGGTaGTCCTTACTCACACTCGAC +
Preference number: 4 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPSKSCR*SLLTLD
Trigger: GTCGAGTGTGAGTAAGGAGCACCTGCAGCTTTTGGA...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR TCA 90 bp CCTGAGAAGCCTTTCAAGGCACAAAGTCTCCACCAGAATCGAATCACATACCTCGAAACTGGATGTCTATaGAATTCTTGGGCACATATC +
Preference number: 4 (lower is better)
Translates to: PEKPFKAQSLHQNRITYLETGCL*NSWAHI
Trigger: GATATGTGCCCAAGAATTTCATAGACATCCAGTTTC...GAGGTATGTGATTCGATTCTGGTGGAGACTTTGTGCCTTGAAAGGCTTCTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp TCTGAATGGAGGCTGATGAGCAAGGGAAAGATGCTTTGGCATCTCAGTACAAAATTCTTTCCATGCCACTaGGCAAGGCATCTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: SEWRLMSKGKMLWHLSTKFFPCH*ARHLQK
Trigger: CTTTTGAAGATGCCTTGCCCAGTGGCATGGAAAGAA...TTTTGTACTGAGATGCCAAAGCATCTTTCCCTTGCTCATCAGCCTCCATTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCAGCTCCTATCATCAAGTaGGCTTCTTTCCATGCCACT +
Preference number: 4 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPAPIIK*ASFHAT
Trigger: AGTGGCATGGAAAGAAGCCCACTTGATGATAGGAGC...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp TCTGAATGGAGGCTGATGAGCAAGGGAAAGATGCTTTGGCATCTCAGTACAAAACTGTTCTTTTCCTTATaGTTCTTTGCTCCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SEWRLMSKGKMLWHLSTKLFFSL*FFAPCL
Trigger: AAGGCAGGGAGCAAAGAAGCATAAGGAAAAGAACAG...TTTTGTACTGAGATGCCAAAGCATCTTTCCCTTGCTCATCAGCCTCCATTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR GCA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCATCTCTAAGGAAGATCTaGTTCTGTCTGGAGATGGAA +
Preference number: 4 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPSLRKI*FCLEME
Trigger: TTCCATCTCCAGACAGAAGCAGATCTTCCTTAGAGA...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CCA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCAAGATCTGCTTCTGTCTaGAGATGGAATTTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPRSASV*RWNLSC
Trigger: ACAGGACAAATTCCATCTCCAGACAGAAGCAGATCT...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS CCA 90 bp CTGCAGATATCGCTGCTGTGGGGGCTGCTGCAGCTGCTGGGGCGCTaGGGCATATTGCGGAGGCTGTGGCTGGTGCTGGTGCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LQISLLWGLLQLLGR*GILRRLWLVLVLLQ
Trigger: CTGCAGCAGCACCAGCACCAGCCACAGCCTCCGCAATATGCCCCAGCGCCCCAGCAGCTGCAGCAGCCCCCACAGCAGCGATATCTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344138.9
ENST00000407075.3
ENST00000481263.1
CDS-3UTR CAA 90 bp CATACCGCCTGCCTACGGGGTCAGCTCCTGCAGGCCGATGACCCCTGTCACCCCGTCCACCAGGATGGGTaGGAGCTATCCAGGACCTCC +
Preference number: 5 (lower is better)
Translates to: HTACLRGQLLQADDPCHPVHQDG*ELSRTS
Trigger: GGAGGTCCTGGATAGCTCCAACCCATCCTGGTGGAC...GGGGTGACAGGGGTCATCGGCCTGCAGGAGCTGACCCCGTAGGCAGGCGGTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS TCA 90 bp TGTGGCTGCCTTTCCCAAGCTGTCTCCACCCACAACCTCTCCTCCTaGGTTCCAGCTCTGCTGAGCCTGGCGCTGCTCCCTGCATTCAGC +
Preference number: 5 (lower is better)
Translates to: CGCLSQAVSTHNLSS*VPALLSLALLPAFS
Trigger: GCTGAATGCAGGGAGCAGCGCCAGGCTCAGCAGAGCTGGAACTCAGGAGGAGAGGTTGTGGGTGGAGACAGCTTGGGAAAGGCAGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS-3UTR CAA 90 bp ACCTCCAGAGTGAGCCCTTGGACACATGATTCTAGCGTGATGGGATGGAGAGCGGGGCGCTGGGGCATATaGCGGAGGCTGTGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: TSRVSPWTHDSSVMGWRAGRWGI*RRLWLV
Trigger: CACCAGCCACAGCCTCCGCAATATGCCCCAGCGCCC...CGCTCTCCATCCCATCACGCTAGAATCATGTGTCCAAGGGCTCACTCTGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CAA 90 bp CCCTGTTGTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGAAGAGGCCCAGCTTGTaGTGCAGGCGGCCGGTCCAC +
Preference number: 5 (lower is better)
Translates to: PCCSVSSAEVWSLLSCSPKRPSL*CRRPVH
Trigger: GTGGACCGGCCGCCTGCACAACAAGCTGGGCCTCTT...CGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAACAACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CAA 90 bp GCACACCTGCAGGGGTACACACCCATACCCACAAACTCCGAGTGCACTTGGTGCTGGTGCAGAACGGGTTaGCACCCGGCCTCCCCTAAG +
Preference number: 5 (lower is better)
Translates to: AHLQGYTPIPTNSECTWCWCRTG*HPASPK
Trigger: CTTAGGGGAGGCCGGGTGCAAACCCGTTCTGCACCA...GCACCAAGTGCACTCGGAGTTTGTGGGTATGGGTGTGTACCCCTGCAGGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CAA 90 bp GTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGTGAAAATCCCGCTCAGACTCGCTaGGCTGCCCGCAGCACTGGG +
Preference number: 5 (lower is better)
Translates to: VLCPVPRCGLCLAVLRENPAQTR*AARSTG
Trigger: CCCAGTGCTGCGGGCAGCCAAGCGAGTCTGAGCGGG...ATTTTCACGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS TCA 90 bp TGGCCTCAGTGTTGCTGGGCGTCCGAGAAGGCTCATTGGGACTGCTaGGGACCAGGGATCAGGCTATCTGAGGACCAGGGATCAGGCTAT +
Preference number: 5 (lower is better)
Translates to: WPQCCWASEKAHWDC*GPGIRLSEDQGSGY
Trigger: ATAGCCTGATCCCTGGTCCTCAGATAGCCTGATCCCTGGTCCTCAGCAGTCCCAATGAGCCTTCTCGGACGCCCAGCAACACTGAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CCA 90 bp GCAGAGCCGATGGTGCTTCCTGGTAATCAGCAGTTCCTAGGAGAGTaGGCAGATGGATGTCTCCAGGCCGGAGAGCAAGGCTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: AEPMVLPGNQQFLGE*ADGCLQAGEQGSGT
Trigger: TGTGCCTGAGCCTTGCTCTCCGGCCTGGAGACATCCATCTGCCCACTCTCCTAGGAACTGCTGATTACCAGGAAGCACCATCGGCTCTGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407075.3
CDS CCA 90 bp CTGAGTGGCCAGGTGTGCATGGCCTTTGTTGAGCCATGTCCTCTGTaGCTGCCTTTCCCAAGCTGTCTCCACCCACAACCTCTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: LSGQVCMAFVEPCPL*LPFPSCLHPQPLLL
Trigger: CAGGAGGAGAGGTTGTGGGTGGAGACAGCTTGGGAAAGGCAGCCACAGAGGACATGGCTCAACAAAGGCCATGCACACCTGGCCACTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CCA 90 bp GGGGTCCAGGGTCTTCATCATGAACTCTCTGAGAACTCAAGAGGCTaGGCCAGGCCTGGAGGGGAGGCAGGTTCTCCTTTCCACCGTACT +
Preference number: 5 (lower is better)
Translates to: GVQGLHHELSENSRG*ARPGGEAGSPFHRT
Trigger: AGTACGGTGGAAAGGAGAACCTGCCTCCCCTCCAGGCCTGGCCCAGCCTCTTGAGTTCTCAGAGAGTTCATGATGAAGACCCTGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481263.1
CDS-3UTR CAA 90 bp GTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGTGAAAATGGGAAGAGGCCCAGCTaGTTGTGCAGGCGGCCGGTC +
Preference number: 5 (lower is better)
Translates to: VLCPVPRCGLCLAVLRENGKRPS*LCRRPV
Trigger: GACCGGCCGCCTGCACAACAAGCTGGGCCTCTTCCC...ATTTTCACGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS GCA 90 bp TGCATGAGGGCCGCATTCATTTCACTGCCCAAGCCGGTGCCACAATaGCCATCATTTATGTCAAGGCTGCCTCCTCGGCGTTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: CMRAAFISLPKPVPQ*PSFMSRLPPRRSWW
Trigger: CCACCAGGAACGCCGAGGAGGCAGCCTTGACATAAATGATGGGCATTGTGGCACCGGCTTGGGCAGTGAAATGAATGCGGCCCTCATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344138.9
ENST00000407075.3
CDS CCA 90 bp CAATGCCCATCATTTATGTCAAGGCTGCCTCCTCGGCGTTCCTGGTaGAAATGGTGGTGCTGCAGATATCGCTGCTGTGGGGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: QCPSFMSRLPPRRSW*KWWCCRYRCCGGCC
Trigger: GCAGCAGCCCCCACAGCAGCGATATCTGCAGCACCACCATTTCCACCAGGAACGCCGAGGAGGCAGCCTTGACATAAATGATGGGCATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344138.9
ENST00000407075.3
CDS CCA 90 bp CCACAATGCCCATCATTTATGTCAAGGCTGCCTCCTCGGCGTTCCTaGTGGAAATGGTGGTGCTGCAGATATCGCTGCTGTGGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: PQCPSFMSRLPPRRS*WKWWCCRYRCCGGC
Trigger: GCAGCCCCCACAGCAGCGATATCTGCAGCACCACCATTTCCACCAGGAACGCCGAGGAGGCAGCCTTGACATAAATGATGGGCATTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344138.9
ENST00000407075.3
CDS CCA 90 bp CCTTTCCACCGTACTGTGCCCACTGCCTTCTTTCCAGATACCTGGTaGAAATGGTGGTGCTGCAGATATCGCTGCTGTGGGGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PFHRTVPTAFFPDTW*KWWCCRYRCCGGCC
Trigger: GCAGCAGCCCCCACAGCAGCGATATCTGCAGCACCACCATTTCCACCAGGTATCTGGAAAGAAGGCAGTGGGCACAGTACGGTGGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481263.1
CDS GCA 90 bp CACTGCCCAAGCCGGTGCCACAATGCCCATCATTTATGTCAAGGCTaGCTCCTCGGCGTTCCTGGTGGAAATGGTGGTGCTGCAGATATC +
Preference number: 5 (lower is better)
Translates to: HCPSRCHNAHHLCQG*LLGVPGGNGGAADI
Trigger: GATATCTGCAGCACCACCATTTCCACCAGGAACGCCGAGGAGGCAGCCTTGACATAAATGATGGGCATTGTGGCACCGGCTTGGGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344138.9
ENST00000407075.3
CDS GCA 90 bp GCCTGGAGGGGAGGCAGGTTCTCCTTTCCACCGTACTGTGCCCACTaGCTTCTTTCCAGATACCTGGTGGAAATGGTGGTGCTGCAGATA +
Preference number: 5 (lower is better)
Translates to: AWRGGRFSFPPYCAH*LLSRYLVEMVVLQI
Trigger: TATCTGCAGCACCACCATTTCCACCAGGTATCTGGAAAGAAGGCAGTGGGCACAGTACGGTGGAAAGGAGAACCTGCCTCCCCTCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481263.1
CDS CCA 90 bp TCTCCTTTCCACCGTACTGTGCCCACTGCCTTCTTTCCAGATACCTaGTGGAAATGGTGGTGCTGCAGATATCGCTGCTGTGGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: SPFHRTVPTAFFPDT*WKWWCCRYRCCGGC
Trigger: GCAGCCCCCACAGCAGCGATATCTGCAGCACCACCATTTCCACCAGGTATCTGGAAAGAAGGCAGTGGGCACAGTACGGTGGAAAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481263.1
CDS GCA 90 bp CCCCTCTCCAGACTACGAACCTCCCAGGACAAGGATGGTGGCTTATaGCGACTGTATTTCCATCACCCGGCCTGGTTGGTGTCTGGTATA +
Preference number: 5 (lower is better)
Translates to: PLSRLRTSQDKDGGL*RLYFHHPAWLVSGI
Trigger: TATACCAGACACCAACCAGGCCGGGTGATGGAAATACAGTCGGCATAAGCCACCATCCTTGTCCTGGGAGGTTCGTAGTCTGGAGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CCA 90 bp ATGTGTTCCCCTCTCCAGACTACGAACCTCCCAGGACAAGGATGGTaGCTTATGCCGACTGTATTTCCATCACCCGGCCTGGTTGGTGTC +
Preference number: 5 (lower is better)
Translates to: MCSPLQTTNLPGQGW*LMPTVFPSPGLVGV
Trigger: GACACCAACCAGGCCGGGTGATGGAAATACAGTCGGCATAAGCCACCATCCTTGTCCTGGGAGGTTCGTAGTCTGGAGAGGGGAACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CCA 90 bp TGGATGTGTTCCCCTCTCCAGACTACGAACCTCCCAGGACAAGGATaGTGGCTTATGCCGACTGTATTTCCATCACCCGGCCTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: WMCSPLQTTNLPGQG*WLMPTVFPSPGLVG
Trigger: ACCAACCAGGCCGGGTGATGGAAATACAGTCGGCATAAGCCACCATCCTTGTCCTGGGAGGTTCGTAGTCTGGAGAGGGGAACACATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS-3UTR CAA 90 bp ACCTCCAGAGTGAGCCCTTGGACACATGATTCTAGCGTGATGGGATGGAGAGCGCTCTCACGCTGCCCCTaGATCCTCCTGGATGTCTTA +
Preference number: 5 (lower is better)
Translates to: TSRVSPWTHDSSVMGWRALSRCP*ILLDVL
Trigger: TAAGACATCCAGGAGGATCAAGGGGCAGCGTGAGAG...CGCTCTCCATCCCATCACGCTAGAATCATGTGTCCAAGGGCTCACTCTGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS TCA 90 bp GAGCCTGGCGCTGCTCCCTGCATTCAGCATGGGCTTGCACATCTCTaGGCTTTAGCTAAAAGCCCAAGTCACCTTCAGTGCATTCCTGAC +
Preference number: 5 (lower is better)
Translates to: EPGAAPCIQHGLAHL*ALAKSPSHLQCIPD
Trigger: GTCAGGAATGCACTGAAGGTGACTTGGGCTTTTAGCTAAAGCTCAGAGATGTGCAAGCCCATGCTGAATGCAGGGAGCAGCGCCAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS GCA 90 bp TGCAGGATGAGGACAAGCTTTAAAAAGCCCCTGAGTGGCCAGGTGTaGATGGCCTTTGTTGAGCCATGTCCTCTGTGGCTGCCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: CRMRTSFKKPLSGQV*MAFVEPCPLWLPFP
Trigger: TGGGAAAGGCAGCCACAGAGGACATGGCTCAACAAAGGCCATGCACACCTGGCCACTCAGGGGCTTTTTAAAGCTTGTCCTCATCCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS-3UTR CAA 90 bp GCACACCTGCAGGGGTACACACCCATACCCACAAACTCCGAGTGCACTTGGTGCAAGAAGCCAACCTCCTaGCCCATGAGTAAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: AHLQGYTPIPTNSECTWCKKPTS*PMSKFS
Trigger: AGAGAACTTACTCATGGGCAAGGAGGTTGGCTTCTT...GCACCAAGTGCACTCGGAGTTTGTGGGTATGGGTGTGTACCCCTGCAGGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CAA 90 bp GGGTATGCAACGCAGACACCAGACACGGCCTGGCCAAACAAGGACACTTTGTTTTTCAACCCCACCCTGTaGTTCTGTGTCCAGTGCCGA +
Preference number: 5 (lower is better)
Translates to: GYATQTPDTAWPNKDTLFFNPTL*FCVQCR
Trigger: TCGGCACTGGACACAGAACAACAGGGTGGGGTTGAA...AAACAAAGTGTCCTTGTTTGGCCAGGCCGTGTCTGGTGTCTGCGTTGCATACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CAA 90 bp ACCTCCAGAGTGAGCCCTTGGACACATGATTCTAGCGTGATGGGATGGAGAGCGTTTCCTTATGCTTCTTaGCTCCCTGCCTTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: TSRVSPWTHDSSVMGWRAFPYAS*LPAFRS
Trigger: GCTGCGGAAGGCAGGGAGCAAAGAAGCATAAGGAAA...CGCTCTCCATCCCATCACGCTAGAATCATGTGTCCAAGGGCTCACTCTGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS GCA 90 bp AGTCCAAGGCCACTTCAGCTCAGCAAGTGGCCACTACAACTCAAGTaGAGGATGAGGACAAGCTTTAAAAAGCCCCTGAGTGGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SPRPLQLSKWPLQLK*RMRTSFKKPLSGQV
Trigger: CACCTGGCCACTCAGGGGCTTTTTAAAGCTTGTCCTCATCCTGCACTTGAGTTGTAGTGGCCACTTGCTGAGCTGAAGTGGCCTTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS GCA 90 bp CACTGCCCAAGCCGGTGCCACAATGCCCATCATTTATGTCAAGGCTaGCTCCTCGGCGTTCCTAGAAACATACAACAGAAGACTGGTCAC +
Preference number: 5 (lower is better)
Translates to: HCPSRCHNAHHLCQG*LLGVPRNIQQKTGH
Trigger: GTGACCAGTCTTCTGTTGTATGTTTCTAGGAACGCCGAGGAGGCAGCCTTGACATAAATGATGGGCATTGTGGCACCGGCTTGGGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460449.1
CDS-3UTR CAA 90 bp CCCTGTTGTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGCATGACCTTGAAGTGTaGAACGTCATCCTCATGCCT +
Preference number: 5 (lower is better)
Translates to: PCCSVSSAEVWSLLSCSPHDLEV*NVILMP
Trigger: AGGCATGAGGATGACGTTCAACACTTCAAGGTCATG...CGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAACAACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS TCA 90 bp CAATCCCCCGACTCATGCATGGCAACGAATTTTCCAAACAGCTCCTaGGAGCCAGCGATTGAGGAACTCAGACTTAACACGAACCGGTCC +
Preference number: 5 (lower is better)
Translates to: QSPDSCMATNFPNSS*EPAIEELRLNTNRS
Trigger: GGACCGGTTCGTGTTAAGTCTGAGTTCCTCAATCGCTGGCTCTCAGGAGCTGTTTGGAAAATTCGTTGCCATGCATGAGTCGGGGGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420971.5
ENST00000478445.1
CDS TCA 90 bp TGGAAGACGAGGGTGGAAGTTGGTACAAGGATGGTCTCCAGTGGATaGCAGTCACATGATCACAGTGCCCCACAGAGAAGGCAGGAACTT +
Preference number: 5 (lower is better)
Translates to: WKTRVEVGTRMVSSG*QSHDHSAPQRRQEL
Trigger: AAGTTCCTGCCTTCTCTGTGGGGCACTGTGATCATGTGACTGTCATCCACTGGAGACCATCCTTGTACCAACTTCCACCCTCGTCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS-3UTR CAA 90 bp ACCTCCAGAGTGAGCCCTTGGACACATGATTCTAGCGTGATGGGATGGAGAGCGGCAGTGAAATCAAACTaGGCAACAGCTTCCATGCTG +
Preference number: 5 (lower is better)
Translates to: TSRVSPWTHDSSVMGWRAAVKSN*ATASML
Trigger: CAGCATGGAAGCTGTTGCCAAGTTTGATTTCACTGC...CGCTCTCCATCCCATCACGCTAGAATCATGTGTCCAAGGGCTCACTCTGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS CCA 90 bp GACAAGGATGGTGGCTTATGCCGACTGTATTTCCATCACCCGGCCTaGTTGGTGTCTGGTATAAGGGTGCACAAAGGGAATCAAGGTGAA +
Preference number: 5 (lower is better)
Translates to: DKDGGLCRLYFHHPA*LVSGIRVHKGNQGE
Trigger: TTCACCTTGATTCCCTTTGTGCACCCTTATACCAGACACCAACCAGGCCGGGTGATGGAAATACAGTCGGCATAAGCCACCATCCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS-3UTR CAA 90 bp CACCAGAATCGAATCACATACCTCCGTCTAACTAGAGCTGGTCCTCCCACATCAAAACTCCGAGTGCACTaGGTGCAGAACGGGTTTGCA +
Preference number: 5 (lower is better)
Translates to: HQNRITYLRLTRAGPPTSKLRVH*VQNGFA
Trigger: TGCAAACCCGTTCTGCACCAAGTGCACTCGGAGTTT...TGATGTGGGAGGACCAGCTCTAGTTAGACGGAGGTATGTGATTCGATTCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS CCA 90 bp TTGTGTTTGCAGGAAGAGCTGCCGGAATCTATAGGATCTAGGTCCTaGGATCATTCTCGGAATCCCCAGATGCCAGGAGCAGGAAATGAA +
Preference number: 5 (lower is better)
Translates to: LCLQEELPESIGSRS*DHSRNPQMPGAGNE
Trigger: TTCATTTCCTGCTCCTGGCATCTGGGGATTCCGAGAATGATCCCAGGACCTAGATCCTATAGATTCCGGCAGCTCTTCCTGCAAACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407075.3
CDS-3UTR CAA 90 bp GTTCTGTGTCCAGTGCCGAGGTGTGGTCTCTGCTTAGCTGTTCTCCGTGAAAATGAGTATGGATCCACTTaGTGCTGTCTTCCATGTACC +
Preference number: 5 (lower is better)
Translates to: VLCPVPRCGLCLAVLRENEYGST*CCLPCT
Trigger: GGTACATGGAAGACAGCACAAAGTGGATCCATACTC...ATTTTCACGGAGAACAGCTAAGCAGAGACCACACCTCGGCACTGGACACAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CAA 90 bp ACCTCCAGAGTGAGCCCTTGGACACATGATTCTAGCGTGATGGGATGGAGAGCGATGTCTATGAAATTCTaGGGCACATATCCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: TSRVSPWTHDSSVMGWRAMSMKF*GTYPSW
Trigger: CCAGGAAGGATATGTGCCCAAGAATTTCATAGACAT...CGCTCTCCATCCCATCACGCTAGAATCATGTGTCCAAGGGCTCACTCTGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CAA 90 bp CTTCCAAAAGCTGCAGGTGCTCCTTACTCACACTCGACTCCCTCCTGCCTCCACCAAGGGAAAGATGCTTaGGCATCTCAGTACAAAATA +
Preference number: 5 (lower is better)
Translates to: LPKAAGAPYSHSTPSCLHQGKDA*ASQYKI
Trigger: TATTTTGTACTGAGATGCCAAAGCATCTTTCCCTTG...GTGGAGGCAGGAGGGAGTCGAGTGTGAGTAAGGAGCACCTGCAGCTTTTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS CCA 90 bp GTGCATGAATGTGGGAGAAGTCCAAGGCCACTTCAGCTCAGCAAGTaGCCACTACAACTCAAGTGCAGGATGAGGACAAGCTTTAAAAAG +
Preference number: 5 (lower is better)
Translates to: VHECGRSPRPLQLSK*PLQLKCRMRTSFKK
Trigger: CTTTTTAAAGCTTGTCCTCATCCTGCACTTGAGTTGTAGTGGCCACTTGCTGAGCTGAAGTGGCCTTGGACTTCTCCCACATTCATGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS-3UTR CAA 90 bp GGGTATGCAACGCAGACACCAGACACGGCCTGGCCAAACAAGGACACTTTGTTTTTGGAAGAGAAGGGGTaGAGTTTATGTCTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: GYATQTPDTAWPNKDTLFLEEKG*SLCLGF
Trigger: AAAGCCAAGACATAAACTCAACCCCTTCTCTTCCAA...AAACAAAGTGTCCTTGTTTGGCCAGGCCGTGTCTGGTGTCTGCGTTGCATACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CAA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCAAACAGTGCCCACCCCTaGGAGAACAGGAGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPNSAHP*ENRRRA
Trigger: AGCTCTCCTCCTGTTCTCCAAGGGGTGGGCACTGTT...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS GCA 90 bp CAAAACAAAAACCCAAGGGCTAAGATGCAGAGTCTGAAAGTATGGTaGATGAATGTGGGAGAAGTCCAAGGCCACTTCAGCTCAGCAAGT +
Preference number: 5 (lower is better)
Translates to: QNKNPRAKMQSLKVW*MNVGEVQGHFSSAS
Trigger: ACTTGCTGAGCTGAAGTGGCCTTGGACTTCTCCCACATTCATGCACCATACTTTCAGACTCTGCATCTTAGCCCTTGGGTTTTTGTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS-3UTR CAA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCATTCCTTGTAGGTGGTTaGGGTGACTTTCCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPFLVGG*GDFPAS
Trigger: GGAAGCGGGAAAGTCACCCAAACCACCTACAAGGAA...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS TCA 90 bp AAACATCTCCAGTGTGAAAGCTCAGTTCATCCTCACCTGAAGCAGTaGAATCAAACTTGGCAACAGCTTCCATGCTGTAACGTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: KHLQCESSVHPHLKQ*NQTWQQLPCCNVKL
Trigger: CAGCTTCACGTTACAGCATGGAAGCTGTTGCCAAGTTTGATTTCACTGCTTCAGGTGAGGATGAACTGAGCTTTCACACTGGAGATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407075.3
CDS CCA 90 bp TTGGGAAACTGGATGTCTATGAAATTCTTGGGCACATATCCTTCCTaGCTCCCAAGCTCCGCCTTAAACCACTCCTCTTGGTTACTTAAA +
Preference number: 5 (lower is better)
Translates to: LGNWMSMKFLGTYPS*LPSSALNHSSWLLK
Trigger: TTTAAGTAACCAAGAGGAGTGGTTTAAGGCGGAGCTTGGGAGCCAGGAAGGATATGTGCCCAAGAATTTCATAGACATCCAGTTTCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344138.9
ENST00000407075.3
ENST00000420971.5
ENST00000478445.1
CDS TCA 90 bp AAACATCTCCAGTGTGAAAGCTCAGTTCATCCTCACCTGAAGCAGTaGAATCAAACTTGGCAACAGCTTCCATGCTGTAACGTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: KHLQCESSVHPHLKQ*NQTWQQLPCCNVKL
Trigger: AAGCTTCACGTTACAGCATGGAAGCTGTTGCCAAGTTTGATTTCACTGCTTCAGGTGAGGATGAACTGAGCTTTCACACTGGAGATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS TCA 90 bp AAACATCTCCAGTGTGAAAGCTCAGTTCATCCTCACCTGAAGCAGTaGAATCAAACTTGGCAACAGCTTCCATGCTGTAACGTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: KHLQCESSVHPHLKQ*NQTWQQLPCCNVKL
Trigger: CAACTTCACGTTACAGCATGGAAGCTGTTGCCAAGTTTGATTTCACTGCTTCAGGTGAGGATGAACTGAGCTTTCACACTGGAGATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420971.5
ENST00000461082.1
CDS TCA 90 bp TACCTTCAAAACATCTCCAGTGTGAAAGCTCAGTTCATCCTCACCTaGAGCAGTGAAATCAAACTTGGCAACAGCTTCCATGCTGTAACG +
Preference number: 5 (lower is better)
Translates to: YLQNISSVKAQFILT*SSEIKLGNSFHAVT
Trigger: CGTTACAGCATGGAAGCTGTTGCCAAGTTTGATTTCACTGCTTCAGGTGAGGATGAACTGAGCTTTCACACTGGAGATGTTTTGAAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS TCA 90 bp AACAAGGCTCTGTTGTGGGTATTAAGCCTTTTTCTCTTGTGGATCTaGCAGCCAGATGGGCTAAGGGGCATGAATAGATTTGGAATTGTG +
Preference number: 5 (lower is better)
Translates to: NKALLWVLSLFLLWI*QPDGLRGMNRFGIV
Trigger: CACAATTCCAAATCTATTCATGCCCCTTAGCCCATCTGGCTGTCAGATCCACAAGAGAAAAAGGCTTAATACCCACAACAGAGCCTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481263.1
CDS TCA 90 bp CGTGAAGCTTTTGGAAGAGAAGGGGTTGAGTTTATGTCTTGGCTTTaGCACCGAGTTATTAGAATCCTTTCTGGCAAGAAGGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: REAFGREGVEFMSWL*HRVIRILSGKKGDK
Trigger: TTTGTCTCCCTTCTTGCCAGAAAGGATTCTAATAACTCGGTGTCAAAGCCAAGACATAAACTCAACCCCTTCTCTTCCAAAAGCTTCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS TCA 90 bp AATCTTCAAAACATCTCCAGTGTGAAAGCTCAGTTCATCCTCACCTaGAGCAGTGAAATCAAACTTGGCAACAGCTTCCATGCTGTAACG +
Preference number: 5 (lower is better)
Translates to: NLQNISSVKAQFILT*SSEIKLGNSFHAVT
Trigger: CGTTACAGCATGGAAGCTGTTGCCAAGTTTGATTTCACTGCTTCAGGTGAGGATGAACTGAGCTTTCACACTGGAGATGTTTTGAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344138.9
ENST00000407075.3
ENST00000420971.5
CDS GCA 90 bp ATCCTTTCTGGCAAGAAGGGAGACAAATTCAAGCATCAGAGTTACTaGATTTCAGAGTATGGATCCACTTTGTGCTGTCTTCCATGTACC +
Preference number: 5 (lower is better)
Translates to: ILSGKKGDKFKHQSY*ISEYGSTLCCLPCT
Trigger: GGTACATGGAAGACAGCACAAAGTGGATCCATACTCTGAAATGCAGTAACTCTGATGCTTGAATTTGTCTCCCTTCTTGCCAGAAAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CAA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCATGTAACGTGAAGCTTTaGGAAGAGAAGGGGTTGAGT +
Preference number: 5 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPCNVKL*EEKGLS
Trigger: ACTCAACCCCTTCTCTTCCAAAAGCTTCACGTTACA...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS-3UTR CAA 90 bp CTCAGTACAAAATACTCTTCAGTAGCTTTTGCTACAACAGAACACCGAGCTCCACATAATGTGGACAGTTaGGTTCTTGTCCTCTTTACC +
Preference number: 5 (lower is better)
Translates to: LSTKYSSVAFATTEHRAPHNVDS*VLVLFT
Trigger: GGTAAAGAGGACAAGAACCAAACTGTCCACATTATG...TGGAGCTCGGTGTTCTGTTGTAGCAAAAGCTACTGAAGAGTATTTTGTACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS TCA 90 bp TGTGAAGGCCTATGCTTTGCCACTATGTTACTAGATCTTGAAAGTTaGGAGCAGTTAGAAGGCTACCTAATGGGCATGTTCATATTCCAA +
Preference number: 5 (lower is better)
Translates to: CEGLCFATMLLDLES*EQLEGYLMGMFIFQ
Trigger: TTGGAATATGAACATGCCCATTAGGTAGCCTTCTAACTGCTCTCAACTTTCAAGATCTAGTAACATAGTGGCAAAGCATAGGCCTTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS GCA 72 bp GGTGTGGGCCTCCCTGGGACCTCCGGTCCAGGCTGTTaGCCCGGTGACCCTGGTCTTCTCGGGTTCTGTCTC +
Preference number: 6 (lower is better)
Translates to: GVGLPGTSGPGC*PGDPGLLGFCL
Trigger: GAGACAGAACCCGAGAAGACCAGGGTCACCGGGGCAACAGCCTGGACCGGAGGTCCCAGGGAGGCCCACACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344138.9
ENST00000407075.3
ENST00000481263.1
CDS CCA 72 bp GCCCAGCTTGTTGTGCAGGCGGCCGGTCCACCAGGATaGGTTGGAGCTATCCAGGACCTCCACCACCTCCCC +
Preference number: 6 (lower is better)
Translates to: AQLVVQAAGPPG*VGAIQDLHHLP
Trigger: GGGGAGGTGGTGGAGGTCCTGGATAGCTCCAACCCATCCTGGTGGACCGGCCGCCTGCACAACAAGCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344138.9
ENST00000407075.3
ENST00000460449.1
CDS GCA 72 bp AGGCTGCCTCCTCGGCGTTCCTGGTGGAAATGGTGGTaGTGCAGATATCGCTGCTGTGGGGGCTGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: RLPPRRSWWKWW*CRYRCCGGCCS
Trigger: GCTGCAGCAGCCCCCACAGCAGCGATATCTGCAGCACCACCATTTCCACCAGGAACGCCGAGGAGGCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344138.9
ENST00000407075.3
CDS GCA 72 bp GCCGCCTGGAGCTGCACTGGGTCTGTGTGTCTCCGATaGATGAGGGCCGCATTCATTTCACTGCCCAAGCCG +
Preference number: 6 (lower is better)
Translates to: AAWSCTGSVCLR*MRAAFISLPKP
Trigger: CGGCTTGGGCAGTGAAATGAATGCGGCCCTCATGCATCGGAGACACACAGACCCAGTGCAGCTCCAGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344138.9
ENST00000407075.3
ENST00000460449.1
CDS CCA 72 bp TCAAGGCTGCCTCCTCGGCGTTCCTGGTGGAAATGGTaGTGCTGCAGATATCGCTGCTGTGGGGGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SRLPPRRSWWKW*CCRYRCCGGCC
Trigger: GCAGCAGCCCCCACAGCAGCGATATCTGCAGCACCACCATTTCCACCAGGAACGCCGAGGAGGCAGCCTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344138.9
ENST00000407075.3
CDS TCA 72 bp CCTGGAGCTGCACTGGGTCTGTGTGTCTCCGATGCATaGGGGCCGCATTCATTTCACTGCCCAAGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: PGAALGLCVSDA*GPHSFHCPSRC
Trigger: GCACCGGCTTGGGCAGTGAAATGAATGCGGCCCTCATGCATCGGAGACACACAGACCCAGTGCAGCTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344138.9
ENST00000407075.3
ENST00000460449.1
CDS CCA 72 bp ATGTCAAGGCTGCCTCCTCGGCGTTCCTGGTGGAAATaGTGGTGCTGCAGATATCGCTGCTGTGGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: MSRLPPRRSWWK*WCCRYRCCGGC
Trigger: GCAGCCCCCACAGCAGCGATATCTGCAGCACCACCATTTCCACCAGGAACGCCGAGGAGGCAGCCTTGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344138.9
ENST00000407075.3
CDS CAA 90 bp CCTGGGGAGCTCTGGCTGGCCCGGATGATGAAGAAGCCAACCTCCTaGCCCATGAGTAAGTTCTCTGCCTGGTGTCGAGAGAGGCCTTCG +
Preference number: 6 (lower is better)
Translates to: PGELWLARMMKKPTS*PMSKFSAWCRERPS
Trigger: CGAAGGCCTCTCTCGACACCAGGCAGAGAACTTACTCATGGGCAAGGAGGTTGGCTTCTTCATCATCCGGGCCAGCCAGAGCTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344138.9
ENST00000407075.3
ENST00000420971.5
ENST00000478445.1
CDS GCA 72 bp TCACAGTGCCCCACAGAGAAGGCAGGAACTTCTCGCTaGTTGGCAAGTCCCTCCAGGAGCTTCGTAAGACCC +
Preference number: 6 (lower is better)
Translates to: SQCPTEKAGTSR*LASPSRSFVRP
Trigger: GGGTCTTACGAAGCTCCTGGAGGGACTTGCCAAGCAGCGAGAAGTTCCTGCCTTCTCTGTGGGGCACTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CAA 72 bp CAGTGCCCCACAGAGAAGGCAGGAACTTCTCGCTGCTaGGCAAGTCCCTCCAGGAGCTTCGTAAGACCCCAA +
Preference number: 6 (lower is better)
Translates to: QCPTEKAGTSRC*ASPSRSFVRPQ
Trigger: TTGGGGTCTTACGAAGCTCCTGGAGGGACTTGCCAAGCAGCGAGAAGTTCCTGCCTTCTCTGTGGGGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS GCA 72 bp AGCCGGTGCCACAATGCCCATCATTTATGTCAAGGCTaGCTCCTCGGCGTTCCTGGTGGAAATGGTGGTGCT +
Preference number: 6 (lower is better)
Translates to: SRCHNAHHLCQG*LLGVPGGNGGA
Trigger: AGCACCACCATTTCCACCAGGAACGCCGAGGAGGCAGCCTTGACATAAATGATGGGCATTGTGGCACCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344138.9
ENST00000407075.3
CDS GCA 72 bp GCCGCATTCATTTCACTGCCCAAGCCGGTGCCACAATaGCCATCATTTATGTCAAGGCTGCCTCCTCGGCGT +
Preference number: 6 (lower is better)
Translates to: AAFISLPKPVPQ*PSFMSRLPPRR
Trigger: ACGCCGAGGAGGCAGCCTTGACATAAATGATGGGCATTGTGGCACCGGCTTGGGCAGTGAAATGAATGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344138.9
ENST00000407075.3
ENST00000460449.1
CDS GCA 72 bp TGTGCATGGCCTTTGTTGAGCCATGTCCTCTGTGGCTaGCTTTCCCAAGCTGTCTCCACCCACAACCTCTCC +
Preference number: 6 (lower is better)
Translates to: CAWPLLSHVLCG*LSQAVSTHNLS
Trigger: GGAGAGGTTGTGGGTGGAGACAGCTTGGGAAAGGCAGCCACAGAGGACATGGCTCAACAAAGGCCATGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CCA 72 bp ATGGTGCTTCCTGGTAATCAGCAGTTCCTAGGAGAGTaGGCAGATGGATGTCTCCAGGCCGGAGAGCAAGGC +
Preference number: 6 (lower is better)
Translates to: MVLPGNQQFLGE*ADGCLQAGEQG
Trigger: GCCTTGCTCTCCGGCCTGGAGACATCCATCTGCCCACTCTCCTAGGAACTGCTGATTACCAGGAAGCACCAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407075.3
CDS CCA 72 bp CCTCTCCAGACTACGAACCTCCCAGGACAAGGATGGTaGCTTATGCCGACTGTATTTCCATCACCCGGCCTG +
Preference number: 6 (lower is better)
Translates to: PLQTTNLPGQGW*LMPTVFPSPGL
Trigger: CAGGCCGGGTGATGGAAATACAGTCGGCATAAGCCACCATCCTTGTCCTGGGAGGTTCGTAGTCTGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CCA 72 bp TCCCCTCTCCAGACTACGAACCTCCCAGGACAAGGATaGTGGCTTATGCCGACTGTATTTCCATCACCCGGC +
Preference number: 6 (lower is better)
Translates to: SPLQTTNLPGQG*WLMPTVFPSPG
Trigger: GCCGGGTGATGGAAATACAGTCGGCATAAGCCACCATCCTTGTCCTGGGAGGTTCGTAGTCTGGAGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CCA 72 bp CAGGTGTGCATGGCCTTTGTTGAGCCATGTCCTCTGTaGCTGCCTTTCCCAAGCTGTCTCCACCCACAACCT +
Preference number: 6 (lower is better)
Translates to: QVCMAFVEPCPL*LPFPSCLHPQP
Trigger: AGGTTGTGGGTGGAGACAGCTTGGGAAAGGCAGCCACAGAGGACATGGCTCAACAAAGGCCATGCACACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CAA 72 bp CTCTGGCTGGCCCGGATGATGAAGAAGCCAACCTCCTaGCCCATGAGTAAGTTCTCTGCCTGGTGTCGAGAG +
Preference number: 6 (lower is better)
Translates to: LWLARMMKKPTS*PMSKFSAWCRE
Trigger: CTCTCGACACCAGGCAGAGAACTTACTCATGGGCAAGGAGGTTGGCTTCTTCATCATCCGGGCCAGCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344138.9
ENST00000407075.3
ENST00000420971.5
ENST00000478445.1
CDS CAA 90 bp TCCAGGCCGGAGAGCAAGGCTCAGGCACACAACAAGGGCTTGTGTTaGCAGGAAGAGCTGCCGGAATCTATAGGATCTAGGTCCTGGGAT +
Preference number: 6 (lower is better)
Translates to: SRPESKAQAHNKGLC*QEELPESIGSRSWD
Trigger: ATCCCAGGACCTAGATCCTATAGATTCCGGCAGCTCTTCCTGCAAACACAAGCCCTTGTTGTGTGCCTGAGCCTTGCTCTCCGGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407075.3
CDS CAA 90 bp GATGTCTCCAGGCCGGAGAGCAAGGCTCAGGCACACAACAAGGGCTaGTGTTTGCAGGAAGAGCTGCCGGAATCTATAGGATCTAGGTCC +
Preference number: 6 (lower is better)
Translates to: DVSRPESKAQAHNKG*CLQEELPESIGSRS
Trigger: GGACCTAGATCCTATAGATTCCGGCAGCTCTTCCTGCAAACACAAGCCCTTGTTGTGTGCCTGAGCCTTGCTCTCCGGCCTGGAGACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407075.3
CDS GCA 72 bp AGACTACGAACCTCCCAGGACAAGGATGGTGGCTTATaGCGACTGTATTTCCATCACCCGGCCTGGTTGGTG +
Preference number: 6 (lower is better)
Translates to: RLRTSQDKDGGL*RLYFHHPAWLV
Trigger: CACCAACCAGGCCGGGTGATGGAAATACAGTCGGCATAAGCCACCATCCTTGTCCTGGGAGGTTCGTAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CCA 72 bp TCATTTATGTCAAGGCTGCCTCCTCGGCGTTCCTGGTaGAAATGGTGGTGCTGCAGATATCGCTGCTGTGGG +
Preference number: 6 (lower is better)
Translates to: SFMSRLPPRRSW*KWWCCRYRCCG
Trigger: CCCACAGCAGCGATATCTGCAGCACCACCATTTCCACCAGGAACGCCGAGGAGGCAGCCTTGACATAAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344138.9
ENST00000407075.3
CDS CCA 72 bp CGTACTGTGCCCACTGCCTTCTTTCCAGATACCTGGTaGAAATGGTGGTGCTGCAGATATCGCTGCTGTGGG +
Preference number: 6 (lower is better)
Translates to: RTVPTAFFPDTW*KWWCCRYRCCG
Trigger: CCCACAGCAGCGATATCTGCAGCACCACCATTTCCACCAGGTATCTGGAAAGAAGGCAGTGGGCACAGTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481263.1
CDS CAA 72 bp AGGCCGGAGAGCAAGGCTCAGGCACACAACAAGGGCTaGTGTTTGCAGGAAGAGCTGCCGGAATCTATAGGA +
Preference number: 6 (lower is better)
Translates to: RPESKAQAHNKG*CLQEELPESIG
Trigger: TCCTATAGATTCCGGCAGCTCTTCCTGCAAACACAAGCCCTTGTTGTGTGCCTGAGCCTTGCTCTCCGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407075.3
CDS CAA 72 bp CTAATTCTCGGTGGTGAGACACTAATGGCCTCAGTGTaGCTGGGCGTCCGAGAAGGCTCATTGGGACTGCTG +
Preference number: 6 (lower is better)
Translates to: LILGGETLMASV*LGVREGSLGLL
Trigger: CAGCAGTCCCAATGAGCCTTCTCGGACGCCCAGCAACACTGAGGCCATTAGTGTCTCACCACCGAGAATTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CAA 90 bp CCTGTGCTCCCTGAGAACTTAGCCAAGAACATCTGTAACAGCCCTTaGGGTGGATGTGTTCCCCTCTCCAGACTACGAACCTCCCAGGAC +
Preference number: 6 (lower is better)
Translates to: PVLPENLAKNICNSP*GGCVPLSRLRTSQD
Trigger: GTCCTGGGAGGTTCGTAGTCTGGAGAGGGGAACACATCCACCCAAAGGGCTGTTACAGATGTTCTTGGCTAAGTTCTCAGGGAGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS GCA 72 bp GCAGTGATCAGGGTTCCAGAATTGTTTGGGCGAACCTaGTGTCTCTCTATCAGGCAAAGCGATAAGGGGCCG +
Preference number: 6 (lower is better)
Translates to: AVIRVPELFGRT*CLSIRQSDKGP
Trigger: CGGCCCCTTATCGCTTTGCCTGATAGAGAGACAGCAGGTTCGCCCAAACAATTCTGGAACCCTGATCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420971.5
ENST00000461082.1
ENST00000478445.1
CDS CCA 72 bp CCATCATTTATGTCAAGGCTGCCTCCTCGGCGTTCCTaGTGGAAATGGTGGTGCTGCAGATATCGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: PSFMSRLPPRRS*WKWWCCRYRCC
Trigger: ACAGCAGCGATATCTGCAGCACCACCATTTCCACCAGGAACGCCGAGGAGGCAGCCTTGACATAAATGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344138.9
ENST00000407075.3
CDS CCA 72 bp CAGGAAGAGCTGCCGGAATCTATAGGATCTAGGTCCTaGGATCATTCTCGGAATCCCCAGATGCCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: QEELPESIGSRS*DHSRNPQMPGA
Trigger: TGCTCCTGGCATCTGGGGATTCCGAGAATGATCCCAGGACCTAGATCCTATAGATTCCGGCAGCTCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407075.3
CDS CCA 72 bp TGTGGGAGAAGTCCAAGGCCACTTCAGCTCAGCAAGTaGCCACTACAACTCAAGTGCAGGATGAGGACAAGC +
Preference number: 6 (lower is better)
Translates to: CGRSPRPLQLSK*PLQLKCRMRTS
Trigger: GCTTGTCCTCATCCTGCACTTGAGTTGTAGTGGCCACTTGCTGAGCTGAAGTGGCCTTGGACTTCTCCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CCA 72 bp CACCGTACTGTGCCCACTGCCTTCTTTCCAGATACCTaGTGGAAATGGTGGTGCTGCAGATATCGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: HRTVPTAFFPDT*WKWWCCRYRCC
Trigger: ACAGCAGCGATATCTGCAGCACCACCATTTCCACCAGGTATCTGGAAAGAAGGCAGTGGGCACAGTACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481263.1
CDS CAA 90 bp ATAACAAACCTAATTCTCGGTGGTGAGACACTAATGGCCTCAGTGTaGCTGGGCGTCCGAGAAGGCTCATTGGGACTGCTGAGGACCAGG +
Preference number: 6 (lower is better)
Translates to: ITNLILGGETLMASV*LGVREGSLGLLRTR
Trigger: CCTGGTCCTCAGCAGTCCCAATGAGCCTTCTCGGACGCCCAGCAACACTGAGGCCATTAGTGTCTCACCACCGAGAATTAGGTTTGTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS TCA 72 bp AGGGTGGAAGTTGGTACAAGGATGGTCTCCAGTGGATaGCAGTCACATGATCACAGTGCCCCACAGAGAAGG +
Preference number: 6 (lower is better)
Translates to: RVEVGTRMVSSG*QSHDHSAPQRR
Trigger: CCTTCTCTGTGGGGCACTGTGATCATGTGACTGTCATCCACTGGAGACCATCCTTGTACCAACTTCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CAA 72 bp GAGAGCAAGGCTCAGGCACACAACAAGGGCTTGTGTTaGCAGGAAGAGCTGCCGGAATCTATAGGATCTAGG +
Preference number: 6 (lower is better)
Translates to: ESKAQAHNKGLC*QEELPESIGSR
Trigger: CCTAGATCCTATAGATTCCGGCAGCTCTTCCTGCAAACACAAGCCCTTGTTGTGTGCCTGAGCCTTGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407075.3
CDS GCA 72 bp AGCCGGTGCCACAATGCCCATCATTTATGTCAAGGCTaGCTCCTCGGCGTTCCTAGAAACATACAACAGAAG +
Preference number: 6 (lower is better)
Translates to: SRCHNAHHLCQG*LLGVPRNIQQK
Trigger: CTTCTGTTGTATGTTTCTAGGAACGCCGAGGAGGCAGCCTTGACATAAATGATGGGCATTGTGGCACCGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460449.1
CDS CAA 72 bp GGCTTATGCCGACTGTATTTCCATCACCCGGCCTGGTaGGTGTCTGGTATAAGGGTGCACAAAGGGAATCAA +
Preference number: 6 (lower is better)
Translates to: GLCRLYFHHPAW*VSGIRVHKGNQ
Trigger: TTGATTCCCTTTGTGCACCCTTATACCAGACACCAACCAGGCCGGGTGATGGAAATACAGTCGGCATAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CAA 72 bp CCTGAGAACTTAGCCAAGAACATCTGTAACAGCCCTTaGGGTGGATGTGTTCCCCTCTCCAGACTACGAACC +
Preference number: 6 (lower is better)
Translates to: PENLAKNICNSP*GGCVPLSRLRT
Trigger: GGTTCGTAGTCTGGAGAGGGGAACACATCCACCCAAAGGGCTGTTACAGATGTTCTTGGCTAAGTTCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CAA 90 bp AAGGATGGTGGCTTATGCCGACTGTATTTCCATCACCCGGCCTGGTaGGTGTCTGGTATAAGGGTGCACAAAGGGAATCAAGGTGAACTT +
Preference number: 6 (lower is better)
Translates to: KDGGLCRLYFHHPAW*VSGIRVHKGNQGEL
Trigger: AAGTTCACCTTGATTCCCTTTGTGCACCCTTATACCAGACACCAACCAGGCCGGGTGATGGAAATACAGTCGGCATAAGCCACCATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS GCA 72 bp CCACTTCAGCTCAGCAAGTGGCCACTACAACTCAAGTaGAGGATGAGGACAAGCTTTAAAAAGCCCCTGAGT +
Preference number: 6 (lower is better)
Translates to: PLQLSKWPLQLK*RMRTSFKKPLS
Trigger: ACTCAGGGGCTTTTTAAAGCTTGTCCTCATCCTGCACTTGAGTTGTAGTGGCCACTTGCTGAGCTGAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CCA 72 bp TGGATGTCTATGAAATTCTTGGGCACATATCCTTCCTaGCTCCCAAGCTCCGCCTTAAACCACTCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: WMSMKFLGTYPS*LPSSALNHSSW
Trigger: CCAAGAGGAGTGGTTTAAGGCGGAGCTTGGGAGCCAGGAAGGATATGTGCCCAAGAATTTCATAGACATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344138.9
ENST00000407075.3
ENST00000420971.5
ENST00000478445.1
CDS CAA 72 bp GCCCAAGTCACCTTCAGTGCATTCCTGACGTTCACATaGCACACACTCCTACAACCCCCATCTTTCAAGATG +
Preference number: 6 (lower is better)
Translates to: AQVTFSAFLTFT*HTLLQPPSFKM
Trigger: CATCTTGAAAGATGGGGGTTGTAGGAGTGTGTGCAATGTGAACGTCAGGAATGCACTGAAGGTGACTTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS TCA 72 bp CAAGGTTCTTTGTATAACAAACCTAATTCTCGGTGGTaGGACACTAATGGCCTCAGTGTTGCTGGGCGTCCG +
Preference number: 6 (lower is better)
Translates to: QGSLYNKPNSRW*DTNGLSVAGRP
Trigger: CGGACGCCCAGCAACACTGAGGCCATTAGTGTCTCACCACCGAGAATTAGGTTTGTTATACAAAGAACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CCA 72 bp CAGGTTCTCTTTGTAATGGAAGACGAGGGTGGAAGTTaGTACAAGGATGGTCTCCAGTGGATGACAGTCACA +
Preference number: 6 (lower is better)
Translates to: QVLFVMEDEGGS*YKDGLQWMTVT
Trigger: TGTGACTGTCATCCACTGGAGACCATCCTTGTACCAACTTCCACCCTCGTCTTCCATTACAAAGAGAACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461082.1
CDS CAA 72 bp GTAATTACCCTTGTTGTCTCGCATGACCTTGAAGTGTaGAACGTCATCCTCATGCCTGACAGAGATGGAGAA +
Preference number: 6 (lower is better)
Translates to: VITLVVSHDLEV*NVILMPDRDGE
Trigger: TTCTCCATCTCTGTCAGGCATGAGGATGACGTTCAACACTTCAAGGTCATGCGAGACAACAAGGGTAATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344138.9
ENST00000407075.3
ENST00000478445.1
CDS TCA 72 bp AACATCTCCAGTGTGAAAGCTCAGTTCATCCTCACCTaGAGCAGTGAAATCAAACTTGGCAACAGCTTCCAT +
Preference number: 6 (lower is better)
Translates to: NISSVKAQFILT*SSEIKLGNSFH
Trigger: ATGGAAGCTGTTGCCAAGTTTGATTTCACTGCTTCAGGTGAGGATGAACTGAGCTTTCACACTGGAGATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344138.9
ENST00000407075.3
ENST00000420971.5
ENST00000461082.1
CDS GCA 72 bp GGCAAGAAGGGAGACAAATTCAAGCATCAGAGTTACTaGATTTCAGAGTATGGATCCACTTTGTGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: GKKGDKFKHQSY*ISEYGSTLCCL
Trigger: AAGACAGCACAAAGTGGATCCATACTCTGAAATGCAGTAACTCTGATGCTTGAATTTGTCTCCCTTCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9
CDS CCA 72 bp CAAATTCAAGCATCAGAGTTACTGCATTTCAGAGTATaGATCCACTTTGTGCTGTCTTCCATGTACCACTCT +
Preference number: 6 (lower is better)
Translates to: QIQASELLHFRV*IHFVLSSMYHS
Trigger: AGAGTGGTACATGGAAGACAGCACAAAGTGGATCCATACTCTGAAATGCAGTAACTCTGATGCTTGAATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344138.9