Pregenerated sensors for GRAP (Homo sapiens)
Ensembl gene IDs: ENSG00000154016Ensembl transcript IDs: ENST00000583020.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GCACCTGGTCTCCATAGCTGGGTGCTAACTGCCCGCTaGGCGATCTCCATCAGGCATGGCCCCTCTCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: APGLHSWVLTAR*AISIRHGPSLA Trigger: GGCCAGAGAGGGGCCATGCCTGATGGAGATCGCCCAGCGGGCAGTTAGCACCCAGCTATGGAGACCAGGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583020.1 |
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| CDS-3UTR CCA 90 bp | GCTGCACCTGGTCTCCATAGCTGGGTGCTAACTGCCCGCTGGGCGATCTCCATCCCTGGTCTCCATAGCTaGGTGCTAACTGCCCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAPGLHSWVLTARWAISIPGLHS*VLTARW Trigger: CCAGCGGGCAGTTAGCACCCAGCTATGGAGACCAGG...GATGGAGATCGCCCAGCGGGCAGTTAGCACCCAGCTATGGAGACCAGGTGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583020.1 |
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| CDS-3UTR CCA 90 bp | GCTGCACCTGGTCTCCATAGCTGGGTGCTAACTGCCCGCTGGGCGATCTCCATCGGCATGGCCCCTCTCTaGCCTCAGTTTGCCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: AAPGLHSWVLTARWAISIGMAPL*PQFAHF Trigger: GAAATGGGCAAACTGAGGCCAGAGAGGGGCCATGCC...GATGGAGATCGCCCAGCGGGCAGTTAGCACCCAGCTATGGAGACCAGGTGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583020.1 |
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| CDS-3UTR CCA 90 bp | GCTGCACCTGGTCTCCATAGCTGGGTGCTAACTGCCCGCTGGGCGATCTCCATCGATCTCCATCAGGCATaGCCCCTCTCTGGCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AAPGLHSWVLTARWAISIDLHQA*PLSGLS Trigger: ACTGAGGCCAGAGAGGGGCCATGCCTGATGGAGATC...GATGGAGATCGCCCAGCGGGCAGTTAGCACCCAGCTATGGAGACCAGGTGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583020.1 |
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| CDS-3UTR GCA 90 bp | GCTGCACCTGGTCTCCATAGCTGGGTGCTAACTGCCCGCTGGGCGATCTCCATCTCTCTGGCCTCAGTTTaGCCATTTCACAGACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: AAPGLHSWVLTARWAISISLASV*PFHRHR Trigger: TCTGTGTCTGTGAAATGGGCAAACTGAGGCCAGAGA...GATGGAGATCGCCCAGCGGGCAGTTAGCACCCAGCTATGGAGACCAGGTGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583020.1 |
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