RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRAMD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000075240

Ensembl transcript IDs: ENST00000361034.7, ENST00000406902.6, ENST00000408031.1, ENST00000431155.1, ENST00000447351.5, ENST00000456069.1, ENST00000490378.1

Found 550 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACCGGCTAGGCACGCGGGGGAGGGAACGCTGTCGCATGTCGGCTaGAGGCAGTGCAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGC +
Preference number: 1 (lower is better)
Translates to: APARHAGEGTLSHVG*RQCRPRPLGSAHGC
Trigger: GCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTGCACTGCCTGCAGCCGACATGCGACAGCGTTCCCTCCCCCGCGTGCCTAGCCGGTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 90 bp CAGGCGGCCCCAGCAGACCAGGCCTGCGGGCGCTCCCTCCACAAATaGCACCTTGTTCCCGGGAAGCCCAGGCTTCCCTGGGGCAGGGCG +
Preference number: 1 (lower is better)
Translates to: QAAPADQACGRSLHK*HLVPGKPRLPWGRA
Trigger: CGCCCTGCCCCAGGGAAGCCTGGGCTTCCCGGGAACAAGGTGGCATTTGTGGAGGGAGCGCCCGCAGGCCTGGTCTGCTGGGGCCGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 90 bp AGGGAGCTGCGGGATCCGCCCCAGCAGACACGCAGGCCCGCGGGGTaGCCACCTCCTTCCAGGAGGCCCAAGCCGCCTTTCCCTCCCTTC +
Preference number: 1 (lower is better)
Translates to: RELRDPPQQTRRPAG*PPPSRRPKPPFPPF
Trigger: GAAGGGAGGGAAAGGCGGCTTGGGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGATCCCGCAGCTCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 90 bp CCTCTCTGTTCCCGTGGAGCGAGTGTGGAGCGCAGGCAGGGTCACTaGGCCCGGCCCCAGCCCGGCACCAAGGGCAAATGCCACAGGAGG +
Preference number: 1 (lower is better)
Translates to: PLCSRGASVERRQGH*ARPQPGTKGKCHRR
Trigger: CCTCCTGTGGCATTTGCCCTTGGTGCCGGGCTGGGGCCGGGCGCAGTGACCCTGCCTGCGCTCCACACTCGCTCCACGGGAACAGAGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR TCA 90 bp AGCGGGTTCTGTCCCCATTCGGGAAAGGCCGCCGTGTGGTCATCCTaGCGCCAACGTCCGCGCAGTCCAGAGCCACGGGGGCTCCGCTCC +
Preference number: 1 (lower is better)
Translates to: SGFCPHSGKAAVWSS*RQRPRSPEPRGLRS
Trigger: GGAGCGGAGCCCCCGTGGCTCTGGACTGCGCGGACGTTGGCGTCAGGATGACCACACGGCGGCCTTTCCCGAATGGGGACAGAACCCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 90 bp AGGCAGGGTCACTGCGCCCGGCCCCAGCCCGGCACCAAGGGCAAATaGCACAGGAGGGTCTCATGTAAGAGGAAGGAGGGCCGCCAGGCC +
Preference number: 1 (lower is better)
Translates to: RQGHCARPQPGTKGK*HRRVSCKRKEGRQA
Trigger: GGCCTGGCGGCCCTCCTTCCTCTTACATGAGACCCTCCTGTGGCATTTGCCCTTGGTGCCGGGCTGGGGCCGGGCGCAGTGACCCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 90 bp AGAGGTGTGGCCATTGTCTGCGGGCACTGCCTCTGCAGCCGCCCCTaGGGGTGGGTCAGTGCCCACCCTGTGTTGCCTCAGGCGCCAAGG +
Preference number: 1 (lower is better)
Translates to: RGVAIVCGHCLCSRP*GWVSAHPVLPQAPR
Trigger: CCTTGGCGCCTGAGGCAACACAGGGTGGGCACTGACCCACCCCCAGGGGCGGCTGCAGAGGCAGTGCCCGCAGACAATGGCCACACCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 90 bp CCCAGGCAACCGCAGCCTGGGGGCCATGTGCCAGACATGCCACAGTaGTCGGAGCACCTCCAACAGCCTTCGCGGATGTTCTCCTGGGCC +
Preference number: 1 (lower is better)
Translates to: PRQPQPGGHVPDMPQ*SEHLQQPSRMFSWA
Trigger: GGCCCAGGAGAACATCCGCGAAGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 90 bp CTTCCTCCCCCAACCAACCCAGGCAACCGCAGCCTGGGGGCCATGTaGCAGACATGCCACAGTGCTCGGAGCACCTCCAACAGCCTTCGC +
Preference number: 1 (lower is better)
Translates to: LPPPTNPGNRSLGAM*QTCHSARSTSNSLR
Trigger: GCGAAGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGGGTTGGTTGGGGGAGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 90 bp CCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGACCTCCTaGCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGAC +
Preference number: 1 (lower is better)
Translates to: PAPSCALTGPQLQTS*PACQAESSRQALTD
Trigger: GTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGCCAGGAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 90 bp GCGTGTGACTCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATaGCGCCGGATCCCTCACCCACACCAGCAAATGAGGATCGGAGCA +
Preference number: 1 (lower is better)
Translates to: ACDSAAPREGGETSP*RRIPHPHQQMRIGA
Trigger: TGCTCCGATCCTCATTTGCTGGTGTGGGTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGAGTCACACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 90 bp CCAGCAAGGAAGGTGCCACCAAAGACACTGAGGGCAGGCGAGGGGTaGGCCCTTCTCACCCTCTCTGTTCCCGTGGAGCGAGTGTGGAGC +
Preference number: 1 (lower is better)
Translates to: PARKVPPKTLRAGEG*ALLTLSVPVERVWS
Trigger: GCTCCACACTCGCTCCACGGGAACAGAGAGGGTGAGAAGGGCCCACCCCTCGCCTGCCCTCAGTGTCTTTGGTGGCACCTTCCTTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 90 bp CCAACCAACCCAGGCAACCGCAGCCTGGGGGCCATGTGCCAGACATaGCACAGTGCTCGGAGCACCTCCAACAGCCTTCGCGGATGTTCT +
Preference number: 1 (lower is better)
Translates to: PTNPGNRSLGAMCQT*HSARSTSNSLRGCS
Trigger: AGAACATCCGCGAAGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGGGTTGGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 90 bp CCCCAGGAGGAAGGGCCCCGCACTCTTCAGCTATGGCTTTGGTGGTaGACGAGCTTCTGGCCTCTGGAGAGCGGGACACAAGGTTGCGAG +
Preference number: 1 (lower is better)
Translates to: PQEEGPRTLQLWLWW*TSFWPLESGTQGCE
Trigger: CTCGCAACCTTGTGTCCCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCGGGGCCCTTCCTCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 90 bp GGGCCCCGCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTaGCCTCTGGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGGGG +
Preference number: 1 (lower is better)
Translates to: GPRTLQLWLWWWTSF*PLESGTQGCENLLG
Trigger: CCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCGGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 90 bp GCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTaGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGG +
Preference number: 1 (lower is better)
Translates to: ALFSYGFGGGRASGL*RAGHKVARTSWGGW
Trigger: CCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 90 bp CCACAGTGCTCGGAGCACCTCCAACAGCCTTCGCGGATGTTCTCCTaGGCCTTCCAAAGAGCAAAGTGTGAGAAAGATGTGCTTTTACCT +
Preference number: 1 (lower is better)
Translates to: PQCSEHLQQPSRMFS*AFQRAKCEKDVLLP
Trigger: AGGTAAAAGCACATCTTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTGGAGGTGCTCCGAGCACTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 90 bp GGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAAGATGTaGTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCTAC +
Preference number: 1 (lower is better)
Translates to: GCSPGPSKEQSVRKM*FYLHHPVPLLVPSY
Trigger: GTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp AGGCGCTCATTGGCCCCGAGGCCCCGGACCCATCCTTGGGCACTGCCGGGCCCTAGCCGCCCCTGGGGGTaGGTCAGTGCCCACCCTGTG +
Preference number: 2 (lower is better)
Translates to: RRSLAPRPRTHPWALPGPSRPWG*VSAHPV
Trigger: CACAGGGTGGGCACTGACCCACCCCCAGGGGCGGCT...AGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGCCTCGGGGCCAATGAGCGCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR TCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCTTACAGACGCGGTGCTaGGCGCCCTGGAGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: SAPADTQARGVATSFQEALQTRC*APWRPA
Trigger: TGCTGGCCTCCAGGGCGCTCAGCACCGCGTCTGTAA...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCCCAGAGCCTCTCGGATaGCCCAAAGGCGGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: SAPADTQARGVATSFQEAPEPLG*PKGGCS
Trigger: GCTGCAGCCGCCTTTGGGCCATCCGAGAGGCTCTGG...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR TCA 90 bp CTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAGGCACCCCCGTCCCTGTaGGCCCTGGCCCCTTCTTGG +
Preference number: 2 (lower is better)
Translates to: LPQSAGGPQRHLTCPVGEAPPSL*ALAPSW
Trigger: CCAAGAAGGGGCCAGGGCTCACAGGGACGGGGGTGC...CTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR TCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGGGACTCAGGACAAGCTaGGGGAGCTGCGGGATCCGC +
Preference number: 2 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVGLRTS*GSCGIR
Trigger: GCGGATCCCGCAGCTCCCTCAGCTTGTCCTGAGTCC...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR GCA 90 bp AGGCGCTCATTGGCCCCGAGGCCCCGGACCCATCCTTGGGCACTGCCGGGCCCTCTGTCGCATGTCGGCTaGAGGCAGTGCAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: RRSLAPRPRTHPWALPGPLSHVG*RQCRPR
Trigger: CCTGGGCCTGCACTGCCTGCAGCCGACATGCGACAG...AGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGCCTCGGGGCCAATGAGCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCCCCTCTCTGTTCCCGTaGAGCGAGTGTGGAGCGCAG +
Preference number: 2 (lower is better)
Translates to: SAPADTQARGVATSFQEAPSLFP*SECGAQ
Trigger: CTGCGCTCCACACTCGCTCCACGGGAACAGAGAGGG...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGCAGCCTGGGCCACCATaGTCCCGGAACACTCCTCCC +
Preference number: 2 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVQPGPP*SRNTPP
Trigger: GGGAGGAGTGTTCCGGGACCATGGTGGCCCAGGCTG...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR TCA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACGCACCCCCGTCCCTGTaGGCCCTGGCCCCTTCTTGG +
Preference number: 2 (lower is better)
Translates to: SAAPREGGETSPCRRIPHAPPSL*ALAPSW
Trigger: CCAAGAAGGGGCCAGGGCTCACAGGGACGGGGGTGC...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR GCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCCCAGACATGCCACAGTaGTCGGAGCACCTCCAACAG +
Preference number: 2 (lower is better)
Translates to: SAPADTQARGVATSFQEAPDMPQ*SEHLQQ
Trigger: CTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGG...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR GCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCCGCTCCCTCCACAAATaGCACCTTGTTCCCGGGAAG +
Preference number: 2 (lower is better)
Translates to: SAPADTQARGVATSFQEARSLHK*HLVPGK
Trigger: CTTCCCGGGAACAAGGTGGCATTTGTGGAGGGAGCG...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCAGGCCCGTTTCTCGGTaGTTGGTGAAAGGCCCCCAT +
Preference number: 2 (lower is better)
Translates to: SAPADTQARGVATSFQEARPVSR*LVKGPH
Trigger: ATGGGGGCCTTTCACCAACCACCGAGAAACGGGCCT...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp CCGTGTGGTCATCCTGACGCCAACGTCCGCGCAGTCCAGAGCCACGGGGGCTCCCAGCTACAGACCTCCTaGCCGGCGTGTCAGGCCGAG +
Preference number: 2 (lower is better)
Translates to: PCGHPDANVRAVQSHGGSQLQTS*PACQAE
Trigger: CTCGGCCTGACACGCCGGCCAGGAGGTCTGTAGCTG...GGAGCCCCCGTGGCTCTGGACTGCGCGGACGTTGGCGTCAGGATGACCACACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTCCCCGGACCCATCCTTaGGCACTGCCGGGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPPRTHP*ALPGPG
Trigger: CCCAGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGG...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR TCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGCCCCATGTCCCTCCTTaGCGACATCTTTCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVPHVPP*RHLSVP
Trigger: GGGGACAGAAAGATGTCGTCAAGGAGGGACATGGGG...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR TCA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGTTACAGACGCGGTGCTaGGCGCCCTGGAGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLLQTRC*APWRPA
Trigger: TGCTGGCCTCCAGGGCGCTCAGCACCGCGTCTGTAA...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR TCA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACTTACAGACGCGGTGCTaGGCGCCCTGGAGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: SAAPREGGETSPCRRIPHLQTRC*APWRPA
Trigger: TGCTGGCCTCCAGGGCGCTCAGCACCGCGTCTGTAA...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR GCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGCGCTCCCTCCACAAATaGCACCTTGTTCCCGGGAAG +
Preference number: 2 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVRSLHK*HLVPGK
Trigger: CTTCCCGGGAACAAGGTGGCATTTGTGGAGGGAGCG...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCGCCCTGGCCCCTTCTTaGTCGATAAAACGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: SAPADTQARGVATSFQEAALAPS*SIKRRG
Trigger: ACCTCTGCGTTTTATCGACCAAGAAGGGGCCAGGGC...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTGGAAGAGGCGCTCATTaGCCCCGAGGCCCCGGACCC +
Preference number: 2 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPGRGAH*PRGPGP
Trigger: GGGTCCGGGGCCTCGGGGCCAATGAGCGCCTCTTCC...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR GCA 90 bp CCGTGTGGTCATCCTGACGCCAACGTCCGCGCAGTCCAGAGCCACGGGGGCTCCGCCATGTGCCAGACATaGCACAGTGCTCGGAGCACC +
Preference number: 2 (lower is better)
Translates to: PCGHPDANVRAVQSHGGSAMCQT*HSARST
Trigger: GGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGC...GGAGCCCCCGTGGCTCTGGACTGCGCGGACGTTGGCGTCAGGATGACCACACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp GCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGACGCGGTGCTGAGTGGTGGACGAGCTTCTaGCCTCTGGAGAGCGGGACA +
Preference number: 2 (lower is better)
Translates to: AGVSGREQQAGPYRRGAEWWTSF*PLESGT
Trigger: TGTCCCGCTCTCCAGAGGCCAGAAGCTCGTCCACCA...CTCAGCACCGCGTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp AGGCGCTCATTGGCCCCGAGGCCCCGGACCCATCCTTGGGCACTGCCGGGCCCTCTATGGCTTTGGTGGTaGACGAGCTTCTGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: RRSLAPRPRTHPWALPGPLWLWW*TSFWPL
Trigger: CAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAG...AGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGCCTCGGGGCCAATGAGCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCCTTCAGCTATGGCTTTaGTGGTGGACGAGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: SAPADTQARGVATSFQEALQLWL*WWTSFW
Trigger: CCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAG...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp CAACCCAGGCAACCGCAGCCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGAGGGCAGGCGAGGGGTaGGCCCTTCTCACCCTCTCT +
Preference number: 2 (lower is better)
Translates to: QPRQPQPGGHVPDMPQCSRAGEG*ALLTLS
Trigger: AGAGAGGGTGAGAAGGGCCCACCCCTCGCCTGCCCT...CGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGGGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR GCA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACAGCCTGGGGGCCATGTaGCAGACATGCCACAGTGCT +
Preference number: 2 (lower is better)
Translates to: SAAPREGGETSPCRRIPHSLGAM*QTCHSA
Trigger: AGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCT...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR GCA 90 bp CAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAAGGCCGCCGTGTGGGTGAAACCAGCCCATaGCGCCGGATCCCTCACCCA +
Preference number: 2 (lower is better)
Translates to: QTHGSERVLSPFGKGRRVGETSP*RRIPHP
Trigger: TGGGTGAGGGATCCGGCGGCATGGGCTGGTTTCACC...CACACGGCGGCCTTTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGCTTCAGCTATGGCTTTaGTGGTGGACGAGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVLQLWL*WWTSFW
Trigger: CCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAG...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTCCCGTGGAGCGAGTGTaGAGCGCAGGCAGGGTCACT +
Preference number: 2 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPPVERV*SAGRVT
Trigger: AGTGACCCTGCCTGCGCTCCACACTCGCTCCACGGG...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp CAGTGCAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGCCCTCTCTGTTCCCGTaGAGCGAGTGTGGAGCGCAG +
Preference number: 2 (lower is better)
Translates to: QCRPRPLGSAHGCSLKHRPSLFP*SECGAQ
Trigger: CTGCGCTCCACACTCGCTCCACGGGAACAGAGAGGG...CCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTGCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp CCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGGAGCACCTCCAACAGCCTAGGGCAGGCGAGGGGTaGGCCCTTCTCACCCTCTCT +
Preference number: 2 (lower is better)
Translates to: PGGHVPDMPQCSEHLQQPRAGEG*ALLTLS
Trigger: AGAGAGGGTGAGAAGGGCCCACCCCTCGCCTGCCCT...AGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp CAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAAGGCCGCCGTGTGCAGGCAACCGCAGCCTaGGGGCCATGTGCCAGACAT +
Preference number: 2 (lower is better)
Translates to: QTHGSERVLSPFGKGRRVQATAA*GPCARH
Trigger: ATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTG...CACACGGCGGCCTTTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR GCA 90 bp CCCCTACAGGAGCCAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAGGCTCGGCTCACGGTTaGTCCCTAAAGCACAGGGGC +
Preference number: 2 (lower is better)
Translates to: PLQEPDPRLRAGSVPIREGSAHG*SLKHRG
Trigger: GCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCC...TTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTGGCTCCTGTAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp GCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGACGCGGTGCTGAGGCCCTGGCCCCTTCTTaGTCGATAAAACGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: AGVSGREQQAGPYRRGAEALAPS*SIKRRG
Trigger: ACCTCTGCGTTTTATCGACCAAGAAGGGGCCAGGGC...CTCAGCACCGCGTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp GCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGACGCGGTGCTGAGCAGCTATGGCTTTGGTaGTGGACGAGCTTCTGGCCT +
Preference number: 2 (lower is better)
Translates to: AGVSGREQQAGPYRRGAEQLWLW*WTSFWP
Trigger: AGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTG...CTCAGCACCGCGTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp GCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGACGCGGTGCTGAGCGCACTCTTCAGCTATaGCTTTGGTGGTGGACGAGC +
Preference number: 2 (lower is better)
Translates to: AGVSGREQQAGPYRRGAERTLQL*LWWWTS
Trigger: GCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCG...CTCAGCACCGCGTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR TCA 90 bp CAGTGCAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGCCCCATGTCCCTCCTTaGCGACATCTTTCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: QCRPRPLGSAHGCSLKHRPHVPP*RHLSVP
Trigger: GGGGACAGAAAGATGTCGTCAAGGAGGGACATGGGG...CCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp CACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGGCCCCCAGTCTGCGGGTaGCCCTCAGAGGCACCTGAC +
Preference number: 2 (lower is better)
Translates to: HSSAMALVVDELLASGERPPVCG*PSEAPD
Trigger: GTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGG...CCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGACCTCTTGGGGTGGCTaGAGAGGTTTCTCTGTCCAG +
Preference number: 2 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLTSWGG*RGFSVQ
Trigger: CTGGACAGAGAAACCTCTCCAGCCACCCCAAGAGGT...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACACCTCTTGGGGTGGCTaGAGAGGTTTCTCTGTCCAG +
Preference number: 2 (lower is better)
Translates to: SAAPREGGETSPCRRIPHTSWGG*RGFSVQ
Trigger: CTGGACAGAGAAACCTCTCCAGCCACCCCAAGAGGT...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp CAACCCAGGCAACCGCAGCCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGCGAGCTTCTGGCCTCTaGAGAGCGGGACACAAGGTT +
Preference number: 2 (lower is better)
Translates to: QPRQPQPGGHVPDMPQCSRASGL*RAGHKV
Trigger: AACCTTGTGTCCCGCTCTCCAGAGGCCAGAAGCTCG...CGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp TGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGACCTCCTGGCCGGCGTGTGGTGGACGAGCTTCTaGCCTCTGGAGAGCGGGACA +
Preference number: 2 (lower is better)
Translates to: CTILCPYWSPATDLLAGVWWTSF*PLESGT
Trigger: TGTCCCGCTCTCCAGAGGCCAGAAGCTCGTCCACCA...CACGCCGGCCAGGAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGCTATGGCTTTGGTGGTaGACGAGCTTCTGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLLWLWW*TSFWPL
Trigger: CAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAG...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACATCCTGTGCCCTTACTaGTCCCCAGCTACAGACCTC +
Preference number: 2 (lower is better)
Translates to: SAAPREGGETSPCRRIPHILCPY*SPATDL
Trigger: GAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGAT...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR TCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTTTTCTCGGTGGTTGGTaGAAGGCCCCCATGTCCCTC +
Preference number: 2 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPFLGGW*KAPMSL
Trigger: GAGGGACATGGGGGCCTTTCACCAACCACCGAGAAA...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR GCA 90 bp GCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGCAGAGGCACCTGACGTaGCCTGTGGGAGAGGGGCAC +
Preference number: 2 (lower is better)
Translates to: ALFSYGFGGGRASGLWRAQRHLT*PVGEGH
Trigger: GTGCCCCTCTCCCACAGGGCACGTCAGGTGCCTCTG...CGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp CAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAAGGCCGCCGTGTGGTTGCGAGAACCTCTTaGGGTGGCTGGAGAGGTTTC +
Preference number: 2 (lower is better)
Translates to: QTHGSERVLSPFGKGRRVVARTS*GGWRGF
Trigger: GAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAAC...CACACGGCGGCCTTTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR TCA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCGCCCTCAGAGGCACCTaGCGTGCCCTGTGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFALRGT*RALWER
Trigger: CCTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGC...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp CCCCTACAGGAGCCAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAGCCCTGGCCCCTTCTTaGTCGATAAAACGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: PLQEPDPRLRAGSVPIREALAPS*SIKRRG
Trigger: ACCTCTGCGTTTTATCGACCAAGAAGGGGCCAGGGC...TTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTGGCTCCTGTAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCCCCCCAGTCTGCGGGTaGCCCTCAGAGGCACCTGAC +
Preference number: 2 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFPPVCG*PSEAPD
Trigger: GTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGG...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp GGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGCCAGAGCCTCTCGGATGGCCCGAGAACCTCTTGGGGTaGCTGGAGAGGTTTCTCTGT +
Preference number: 2 (lower is better)
Translates to: GSRLLPKAQGLPEPLGWPENLLG*LERFLC
Trigger: ACAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTC...GGGCCATCCGAGAGGCTCTGGCAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp CCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGGAGCACCTCCAACAGCCTATCCTGTGCCCTTACTaGTCCCCAGCTACAGACCTC +
Preference number: 2 (lower is better)
Translates to: PGGHVPDMPQCSEHLQQPILCPY*SPATDL
Trigger: GAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGAT...AGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp CAACCCAGGCAACCGCAGCCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGTCGCGGATGTTCTCCTaGGCCTTCCAAAGAGCAAAG +
Preference number: 2 (lower is better)
Translates to: QPRQPQPGGHVPDMPQCSSRMFS*AFQRAK
Trigger: CTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGA...CGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CAA 90 bp TTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGGGACACAAGGTaGCGAGAACCTCTTGGGGTGGCTGGAGAGGTTTCTCTGTCCAGG +
Preference number: 2 (lower is better)
Translates to: LVVDELLASGERDTR*REPLGVAGEVSLSR
Trigger: CCTGGACAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR TCA 90 bp AAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGAGCACCCCCGTCCCTGTaGGCCCTGGCCCCTTCTTGG +
Preference number: 2 (lower is better)
Translates to: KMCFYLHHPVPLLVPSYRAPPSL*ALAPSW
Trigger: CCAAGAAGGGGCCAGGGCTCACAGGGACGGGGGTGC...TCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp TGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGACCTCCTGGCCGGCGTGGAGAACCTCTTGGGGTaGCTGGAGAGGTTTCTCTGT +
Preference number: 2 (lower is better)
Translates to: CTILCPYWSPATDLLAGVENLLG*LERFLC
Trigger: ACAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTC...CACGCCGGCCAGGAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR GCA 90 bp CAACCCAGGCAACCGCAGCCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGAGATGTGCTTTTACCTaGACCATCCTGTGCCCTTAC +
Preference number: 2 (lower is better)
Translates to: QPRQPQPGGHVPDMPQCSRCAFT*TILCPY
Trigger: GTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCT...CGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp AGGAAGGGCCCCGCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCACCTCTTGGGGTGGCTaGAGAGGTTTCTCTGTCCAG +
Preference number: 2 (lower is better)
Translates to: RKGPALFSYGFGGGRASGTSWGG*RGFSVQ
Trigger: CTGGACAGAGAAACCTCTCCAGCCACCCCAAGAGGT...GCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCGGGGCCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp GTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCAGGGCAGGCGAGGGGTaGGCCCTTCTCACCCTCTCT +
Preference number: 2 (lower is better)
Translates to: VRKMCFYLHHPVPLLVPSRAGEG*ALLTLS
Trigger: AGAGAGGGTGAGAAGGGCCCACCCCTCGCCTGCCCT...GCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR TCA 90 bp CTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAGTATTGCAAAAGCTCATaGGGATGTCCAATTGTTTCC +
Preference number: 2 (lower is better)
Translates to: LPQSAGGPQRHLTCPVGEYCKSS*GCPIVS
Trigger: GGAAACAATTGGACATCCTCATGAGCTTTTGCAATA...CTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR GCA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAACAGAGGCACCTGACGTaGCCTGTGGGAGAGGGGCAC +
Preference number: 2 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKQRHLT*PVGEGH
Trigger: GTGCCCCTCTCCCACAGGGCACGTCAGGTGCCTCTG...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR GCA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCAGCGGGACACAAGGTTaGGAGAACCTCTTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFSGTQG*ENLLGW
Trigger: CCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCT...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp GTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCTGGTGGACGAGCTTCTaGCCTCTGGAGAGCGGGACA +
Preference number: 2 (lower is better)
Translates to: VRKMCFYLHHPVPLLVPSWWTSF*PLESGT
Trigger: TGTCCCGCTCTCCAGAGGCCAGAAGCTCGTCCACCA...GCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR GCA 90 bp CAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCAGAGGCACCTGACGTaGCCTGTGGGAGAGGGGCAC +
Preference number: 2 (lower is better)
Translates to: QSVRKMCFYLHHPVPLLVQRHLT*PVGEGH
Trigger: GTGCCCCTCTCCCACAGGGCACGTCAGGTGCCTCTG...GACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCCTATGGCTTTGGTGGTaGACGAGCTTCTGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFLWLWW*TSFWPL
Trigger: CAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAG...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGCAGCCTGGGCCACCATaGTCCCGGAACACTCCTCCC +
Preference number: 2 (lower is better)
Translates to: WSVFISLSPQKGLELNHPQPGPP*SRNTPP
Trigger: GGGAGGAGTGTTCCGGGACCATGGTGGCCCAGGCTG...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR TCA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAATTTCTCGGTGGTTGGTaGAAGGCCCCCATGTCCCTC +
Preference number: 2 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKFLGGW*KAPMSL
Trigger: GAGGGACATGGGGGCCTTTCACCAACCACCGAGAAA...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp AAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGACGAGCTTCTGGCCTCTaGAGAGCGGGACACAAGGTT +
Preference number: 2 (lower is better)
Translates to: KMCFYLHHPVPLLVPSYRRASGL*RAGHKV
Trigger: AACCTTGTGTCCCGCTCTCCAGAGGCCAGAAGCTCG...TCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCCTTCAGCTATGGCTTTaGTGGTGGACGAGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFLQLWL*WWTSFW
Trigger: CCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAG...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR GCA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAAGGCACCAAGGGCAAATaGCACAGGAGGGTCTCATGT +
Preference number: 2 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKGTKGK*HRRVSC
Trigger: ACATGAGACCCTCCTGTGGCATTTGCCCTTGGTGCC...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR GCA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGAGCGGGACACAAGGTTaGGAGAACCTCTTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: WSVFISLSPQKGLELNHPSGTQG*ENLLGW
Trigger: CCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCT...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CCA 90 bp AGAGCAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTAGGCCCGTTTCTCGGTaGTTGGTGAAAGGCCCCCAT +
Preference number: 2 (lower is better)
Translates to: RAKCEKDVLLPAPSCALTRPVSR*LVKGPH
Trigger: ATGGGGGCCTTTCACCAACCACCGAGAAACGGGCCT...AGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 72 bp CTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGCTaGCAGCAGAGCCAGTCGGTGGCCCTCCCCCGACCC +
Preference number: 3 (lower is better)
Translates to: LRSRGLPGRGLC*QQSQSVALPRP
Trigger: GGGTCGGGGGAGGGCCACCGACTGGCTCTGCTGCCAGCACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 72 bp TCCCGTGGAGCGAGTGTGGAGCGCAGGCAGGGTCACTaGGCCCGGCCCCAGCCCGGCACCAAGGGCAAATGC +
Preference number: 3 (lower is better)
Translates to: SRGASVERRQGH*ARPQPGTKGKC
Trigger: GCATTTGCCCTTGGTGCCGGGCTGGGGCCGGGCGCAGTGACCCTGCCTGCGCTCCACACTCGCTCCACGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 72 bp GCACTGCCTCTGCAGCCGCCCCTGGGGGTGGGTCAGTaGCCACCCTGTGTTGCCTCAGGCGCCAAGGTGGGG +
Preference number: 3 (lower is better)
Translates to: ALPLQPPLGVGQ*PPCVASGAKVG
Trigger: CCCCACCTTGGCGCCTGAGGCAACACAGGGTGGGCACTGACCCACCCCCAGGGGCGGCTGCAGAGGCAGTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCGGTTGCGAGAACCTCTaGGGGTGGCTGGAGAGGTTT +
Preference number: 3 (lower is better)
Translates to: SAPADTQARGVATSFQEAGCENL*GWLERF
Trigger: AAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACC...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCCCCCCATGTCCCTCCTaGACGACATCTTTCTGTCCC +
Preference number: 3 (lower is better)
Translates to: SAPADTQARGVATSFQEAPPCPS*TTSFCP
Trigger: GGGACAGAAAGATGTCGTCAAGGAGGGACATGGGGG...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
69% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 72 bp GCGAGGGGTGGGCCCTTCTCACCCTCTCTGTTCCCGTaGAGCGAGTGTGGAGCGCAGGCAGGGTCACTGCGC +
Preference number: 3 (lower is better)
Translates to: ARGGPFSPSLFP*SECGAQAGSLR
Trigger: GCGCAGTGACCCTGCCTGCGCTCCACACTCGCTCCACGGGAACAGAGAGGGTGAGAAGGGCCCACCCCTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACGGGCTCGGCTCACGGTaGCTCCCTAAAGCACAGGGG +
Preference number: 3 (lower is better)
Translates to: SAAPREGGETSPCRRIPHGLGSR*LPKAQG
Trigger: CCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCC...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR TCA 72 bp TGTCCCCATTCGGGAAAGGCCGCCGTGTGGTCATCCTaGCGCCAACGTCCGCGCAGTCCAGAGCCACGGGGG +
Preference number: 3 (lower is better)
Translates to: CPHSGKAAVWSS*RQRPRSPEPRG
Trigger: CCCCCGTGGCTCTGGACTGCGCGGACGTTGGCGTCAGGATGACCACACGGCGGCCTTTCCCGAATGGGGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 72 bp CAGTGCAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTaGTCCCTAAAGCACAGGGGCTGCCAGAGCCTCTCG +
Preference number: 3 (lower is better)
Translates to: QCRPRPLGSAHG*SLKHRGCQSLS
Trigger: CGAGAGGCTCTGGCAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTGCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 72 bp CCAGCAGACCAGGCCTGCGGGCGCTCCCTCCACAAATaGCACCTTGTTCCCGGGAAGCCCAGGCTTCCCTGG +
Preference number: 3 (lower is better)
Translates to: PADQACGRSLHK*HLVPGKPRLPW
Trigger: CCAGGGAAGCCTGGGCTTCCCGGGAACAAGGTGGCATTTGTGGAGGGAGCGCCCGCAGGCCTGGTCTGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 72 bp AACTACAGCTTCTCTCCACGGGGAGCCCAGAGCCCGTaGCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGG +
Preference number: 3 (lower is better)
Translates to: NYSFSPRGAQSP*RSALRSRGLPG
Trigger: CCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTCTGGGCTCCCCGTGGAGAGAAGCTGTAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 72 bp TCCTGTGCCCTTACTGGTCCCCAGCTACAGACCTCCTaGCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCC +
Preference number: 3 (lower is better)
Translates to: SCALTGPQLQTS*PACQAESSRQA
Trigger: GGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGCCAGGAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 72 bp CACTGCGCCCGGCCCCAGCCCGGCACCAAGGGCAAATaGCACAGGAGGGTCTCATGTAAGAGGAAGGAGGGC +
Preference number: 3 (lower is better)
Translates to: HCARPQPGTKGK*HRRVSCKRKEG
Trigger: GCCCTCCTTCCTCTTACATGAGACCCTCCTGTGGCATTTGCCCTTGGTGCCGGGCTGGGGCCGGGCGCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 72 bp CCAGGCAACCGCAGCCTGGGGGCCATGTGCCAGACATaGCACAGTGCTCGGAGCACCTCCAACAGCCTTCGC +
Preference number: 3 (lower is better)
Translates to: PGNRSLGAMCQT*HSARSTSNSLR
Trigger: GCGAAGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 72 bp CAGAGCCTCTCGGATGGCCCAAAGGCGGCTGCAGCCTaGGCCACCATGGTCCCGGAACACTCCTCCCCACTT +
Preference number: 3 (lower is better)
Translates to: QSLSDGPKAAAA*ATMVPEHSSPL
Trigger: AAGTGGGGAGGAGTGTTCCGGGACCATGGTGGCCCAGGCTGCAGCCGCCTTTGGGCCATCCGAGAGGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 72 bp GGGACTGAATCCCAGCACCTAGGAAGAGGCGCTCATTaGCCCCGAGGCCCCGGACCCATCCTTGGGCACTGC +
Preference number: 3 (lower is better)
Translates to: GTESQHLGRGAH*PRGPGPILGHC
Trigger: GCAGTGCCCAAGGATGGGTCCGGGGCCTCGGGGCCAATGAGCGCCTCTTCCTAGGTGCTGGGATTCAGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACGAGCGGGACACAAGGTaGCGAGAACCTCTTGGGGTG +
Preference number: 3 (lower is better)
Translates to: SAAPREGGETSPCRRIPHERDTR*REPLGV
Trigger: CACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTC...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 72 bp CCGCAGCCTGGGGGCCATGTGCCAGACATGCCACAGTaGTCGGAGCACCTCCAACAGCCTTCGCGGATGTTC +
Preference number: 3 (lower is better)
Translates to: PQPGGHVPDMPQ*SEHLQQPSRMF
Trigger: GAACATCCGCGAAGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 72 bp CCAACCAACCCAGGCAACCGCAGCCTGGGGGCCATGTaGCAGACATGCCACAGTGCTCGGAGCACCTCCAAC +
Preference number: 3 (lower is better)
Translates to: PTNPGNRSLGAM*QTCHSARSTSN
Trigger: GTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGGGTTGGTTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 72 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATaGCGCCGGATCCCTCACCCACACCAGCAAATGAGG +
Preference number: 3 (lower is better)
Translates to: SAAPREGGETSP*RRIPHPHQQMR
Trigger: CCTCATTTGCTGGTGTGGGTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 72 bp CACTTCCTCCCCCAACCAACCCAGGCAACCGCAGCCTaGGGGCCATGTGCCAGACATGCCACAGTGCTCGGA +
Preference number: 3 (lower is better)
Translates to: HFLPQPTQATAA*GPCARHATVLG
Trigger: TCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGGGTTGGTTGGGGGAGGAAGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 72 bp CAGGAGGAAGGGCCCCGCACTCTTCAGCTATGGCTTTaGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGGG +
Preference number: 3 (lower is better)
Translates to: QEEGPRTLQLWL*WWTSFWPLESG
Trigger: CCCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCGGGGCCCTTCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp CAACCCAGGCAACCGCAGCCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGAGCCCTGGCCCCTTCTaGGTCGATAAAACGCAGAGG +
Preference number: 3 (lower is better)
Translates to: QPRQPQPGGHVPDMPQCSSPGPF*VDKTQR
Trigger: CCTCTGCGTTTTATCGACCAAGAAGGGGCCAGGGCT...CGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTGAGCGGGACACAAGGTaGCGAGAACCTCTTGGGGTG +
Preference number: 3 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPERDTR*REPLGV
Trigger: CACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTC...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp CAGTGCAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGCCCCCATGTCCCTCCTaGACGACATCTTTCTGTCCC +
Preference number: 3 (lower is better)
Translates to: QCRPRPLGSAHGCSLKHRPPCPS*TTSFCP
Trigger: GGGACAGAAAGATGTCGTCAAGGAGGGACATGGGGG...CCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTGCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp AGGCGCTCATTGGCCCCGAGGCCCCGGACCCATCCTTGGGCACTGCCGGGCCCTCATGAGGATGTCCAATaGTTTCCACTACCAAATCGT +
Preference number: 3 (lower is better)
Translates to: RRSLAPRPRTHPWALPGPHEDVQ*FPLPNR
Trigger: ACGATTTGGTAGTGGAAACAATTGGACATCCTCATG...AGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGCCTCGGGGCCAATGAGCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR TCA 72 bp TCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTaGCGACATCTTTCTGTCCCCAGGAGGAAGGGCCCC +
Preference number: 3 (lower is better)
Translates to: SRWLVKGPHVPP*RHLSVPRRKGP
Trigger: GGGGCCCTTCCTCCTGGGGACAGAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR TCA 72 bp GAAGGAGGGCCGCCAGGCCCGTTTCTCGGTGGTTGGTaGAAGGCCCCCATGTCCCTCCTTGACGACATCTTT +
Preference number: 3 (lower is better)
Translates to: EGGPPGPFLGGW*KAPMSLLDDIF
Trigger: AAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACGGGCCTGGCGGCCCTCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR TCA 72 bp ACAATCTCAACGACACCCAAGGGACTCAGGACAAGCTaGGGGAGCTGCGGGATCCGCCCCAGCAGACACGCA +
Preference number: 3 (lower is better)
Translates to: TISTTPKGLRTS*GSCGIRPSRHA
Trigger: TGCGTGTCTGCTGGGGCGGATCCCGCAGCTCCCTCAGCTTGTCCTGAGTCCCTTGGGTGTCGTTGAGATTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 72 bp GAAGGGCCCCGCACTCTTCAGCTATGGCTTTGGTGGTaGACGAGCTTCTGGCCTCTGGAGAGCGGGACACAA +
Preference number: 3 (lower is better)
Translates to: EGPRTLQLWLWW*TSFWPLESGTQ
Trigger: TTGTGTCCCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCGGGGCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp CCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGGAGCACCTCCAACAGCCTTCTTCAGCTATGGCTTaGGTGGTGGACGAGCTTCTG +
Preference number: 3 (lower is better)
Translates to: PGGHVPDMPQCSEHLQQPSSAMA*VVDELL
Trigger: CAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGA...AGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp AATGCCACAGGAGGGTCTCATGTAAGAGGAAGGAGGGCCGCCAGGCCCGTTTCTGGTTGCGAGAACCTCTaGGGGTGGCTGGAGAGGTTT +
Preference number: 3 (lower is better)
Translates to: NATGGSHVRGRRAARPVSGCENL*GWLERF
Trigger: AAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACC...AGAAACGGGCCTGGCGGCCCTCCTTCCTCTTACATGAGACCCTCCTGTGGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 72 bp AGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTaGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGG +
Preference number: 3 (lower is better)
Translates to: SYGFGGGRASGL*RAGHKVARTSW
Trigger: CCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 72 bp AGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTaGTCCCCAGCTACAGACCTCCTGGCCGGCGTGTCA +
Preference number: 3 (lower is better)
Translates to: RCAFTCTILCPY*SPATDLLAGVS
Trigger: TGACACGCCGGCCAGGAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCGGTTGCGAGAACCTCTaGGGGTGGCTGGAGAGGTTT +
Preference number: 3 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFGCENL*GWLERF
Trigger: AAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACC...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp GTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCCCCGTTTCTCGGTGGTaGGTGAAAGGCCCCCATGTC +
Preference number: 3 (lower is better)
Translates to: VRKMCFYLHHPVPLLVPSPVSRW*VKGPHV
Trigger: GACATGGGGGCCTTTCACCAACCACCGAGAAACGGG...GCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 72 bp ACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTaGCCTCTGGAGAGCGGGACACAAGGTTGCGAGAAC +
Preference number: 3 (lower is better)
Translates to: TLQLWLWWWTSF*PLESGTQGCEN
Trigger: GTTCTCGCAACCTTGTGTCCCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp TGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGACCTCCTGGCCGGCGTGCATGAGGATGTCCAATaGTTTCCACTACCAAATCGT +
Preference number: 3 (lower is better)
Translates to: CTILCPYWSPATDLLAGVHEDVQ*FPLPNR
Trigger: ACGATTTGGTAGTGGAAACAATTGGACATCCTCATG...CACGCCGGCCAGGAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp AAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGACCCGTTTCTCGGTGGTaGGTGAAAGGCCCCCATGTC +
Preference number: 3 (lower is better)
Translates to: KMCFYLHHPVPLLVPSYRPVSRW*VKGPHV
Trigger: GACATGGGGGCCTTTCACCAACCACCGAGAAACGGG...TCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCTCTTCAGCTATGGCTTaGGTGGTGGACGAGCTTCTG +
Preference number: 3 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFSSAMA*VVDELL
Trigger: CAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGA...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CCA 72 bp TCGGAGCACCTCCAACAGCCTTCGCGGATGTTCTCCTaGGCCTTCCAAAGAGCAAAGTGTGAGAAAGATGTG +
Preference number: 3 (lower is better)
Translates to: SEHLQQPSRMFS*AFQRAKCEKDV
Trigger: CACATCTTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTGGAGGTGCTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp CAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCGAGCGGGACACAAGGTaGCGAGAACCTCTTGGGGTG +
Preference number: 3 (lower is better)
Translates to: QSVRKMCFYLHHPVPLLVERDTR*REPLGV
Trigger: CACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTC...GACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp GCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGCATGAGGATGTCCAATaGTTTCCACTACCAAATCGT +
Preference number: 3 (lower is better)
Translates to: ALFSYGFGGGRASGLWRAHEDVQ*FPLPNR
Trigger: ACGATTTGGTAGTGGAAACAATTGGACATCCTCATG...CGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGAGCCCTGGCCCCTTCTaGGTCGATAAAACGCAGAGG +
Preference number: 3 (lower is better)
Translates to: WSVFISLSPQKGLELNHPSPGPF*VDKTQR
Trigger: CCTCTGCGTTTTATCGACCAAGAAGGGGCCAGGGCT...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp AGAGCAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTCCCCCATGTCCCTCCTaGACGACATCTTTCTGTCCC +
Preference number: 3 (lower is better)
Translates to: RAKCEKDVLLPAPSCALTPPCPS*TTSFCP
Trigger: GGGACAGAAAGATGTCGTCAAGGAGGGACATGGGGG...AGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR GCA 72 bp CCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAAGATGTaGTTTTACCTGCACCATCCTGTGCCCTTACTGGTC +
Preference number: 3 (lower is better)
Translates to: PGPSKEQSVRKM*FYLHHPVPLLV
Trigger: GACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTGCTCTTTGGAAGGCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR-3UTR CAA 90 bp CAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCTCTTCAGCTATGGCTTaGGTGGTGGACGAGCTTCTG +
Preference number: 3 (lower is better)
Translates to: QSVRKMCFYLHHPVPLLVSSAMA*VVDELL
Trigger: CAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGA...GACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGGGAGCCCAGAGCCCGTaGCGATCCGCGCTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVGAQSP*RSALRS
Trigger: GGAGCGGAGCGCGGATCGGCACGGGCTCTGGGCTCC...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp AGGCGCTCATTGGCCCCGAGGCCCCGGACCCATCCTTGGGCACTGCCGGGCCCTCCCCGGACCCATCCTTaGGCACTGCCGGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RRSLAPRPRTHPWALPGPPRTHP*ALPGPG
Trigger: CCCAGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGG...AGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGCCTCGGGGCCAATGAGCGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGGCACCCCCGTCCCTGTaGGCCCTGGCCCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVAPPSL*ALAPSW
Trigger: CCAAGAAGGGGCCAGGGCTCACAGGGACGGGGGTGC...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCCCCATCCTTGGGCACTaGCGGGCCCTGGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SAPADTQARGVATSFQEAPILGH*RALGRE
Trigger: CTCTCTCCCCAGGGCCCGGCAGTGCCCAAGGATGGG...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGCTCTGCAGCCGCCCCTaGGGGTGGGTCAGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVLCSRP*GWVSAH
Trigger: GTGGGCACTGACCCACCCCCAGGGGCGGCTGCAGAG...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCTGGCCCAAAGGCGGCTaGAGCCTGGGCCACCATGGT +
Preference number: 4 (lower is better)
Translates to: SAPADTQARGVATSFQEAWPKGG*SLGHHG
Trigger: ACCATGGTGGCCCAGGCTGCAGCCGCCTTTGGGCCA...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCGTGTGGTCATCCTGACGCCAACGTCCGCGCAGTCCAGAGCCACGGGGGCTCCCGCAGGCCCGCGGGGTaGCCACCTCCTTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PCGHPDANVRAVQSHGGSRRPAG*PPPSRR
Trigger: CCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCG...GGAGCCCCCGTGGCTCTGGACTGCGCGGACGTTGGCGTCAGGATGACCACACGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp CCGTGTGGTCATCCTGACGCCAACGTCCGCGCAGTCCAGAGCCACGGGGGCTCCCGCTGGAGCGCTCCTTaGGCTGCGGGTCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PCGHPDANVRAVQSHGGSRWSAP*AAGRWG
Trigger: TCCCCACCGACCCGCAGCTCAAGGAGCGCTCCAGCG...GGAGCCCCCGTGGCTCTGGACTGCGCGGACGTTGGCGTCAGGATGACCACACGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR TCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGTTACAGACGCGGTGCTaGGCGCCCTGGAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVLQTRC*APWRPA
Trigger: TGCTGGCCTCCAGGGCGCTCAGCACCGCGTCTGTAA...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CCTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAGTCGGCTGCAGGCAGTaGAGGCCCAGGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PPPVCGWPSEAPDVPCGRVGCRQ*RPRPLG
Trigger: GCCCAGAGGCCTGGGCCTGCACTGCCTGCAGCCGAC...TCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp GCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGACGCGGTGCTGAGGTCGGCTGCAGGCAGTaGAGGCCCAGGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: AGVSGREQQAGPYRRGAEVGCRQ*RPRPLG
Trigger: GCCCAGAGGCCTGGGCCTGCACTGCCTGCAGCCGAC...CTCAGCACCGCGTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCCTGGGGGTGGGTCAGTaGCCACCCTGTGTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: SAPADTQARGVATSFQEALGVGQ*PPCVAS
Trigger: TGAGGCAACACAGGGTGGGCACTGACCCACCCCCAG...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCGGTGTGGCCATTGTCTaGGGGCACTGCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SAPADTQARGVATSFQEAGVAIV*GHCLCS
Trigger: GCTGCAGAGGCAGTGCCCGCAGACAATGGCCACACC...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGACGCGGTGCTGAGGGCCGGCCGGTGCGCTaGGTACGTAGCTCCGTGACG +
Preference number: 4 (lower is better)
Translates to: AGVSGREQQAGPYRRGAEGRPVR*VRSSVT
Trigger: CGTCACGGAGCTACGTACCCAGCGCACCGGCCGGCC...CTCAGCACCGCGTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCCCCTTCTTGGTGCTGTaGAAGCGACCGGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SAPADTQARGVATSFQEAPFLVL*KRPASS
Trigger: GGAGGACGCCGGTCGCTTCCACAGCACCAAGAAGGG...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp AGGCGCTCATTGGCCCCGAGGCCCCGGACCCATCCTTGGGCACTGCCGGGCCCTCCCGTGGAGCGAGTGTaGAGCGCAGGCAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: RRSLAPRPRTHPWALPGPPVERV*SAGRVT
Trigger: AGTGACCCTGCCTGCGCTCCACACTCGCTCCACGGG...AGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGCCTCGGGGCCAATGAGCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp AGGCGCTCATTGGCCCCGAGGCCCCGGACCCATCCTTGGGCACTGCCGGGCCCTAGGGCAGGCGAGGGGTaGGCCCTTCTCACCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RRSLAPRPRTHPWALPGPRAGEG*ALLTLS
Trigger: AGAGAGGGTGAGAAGGGCCCACCCCTCGCCTGCCCT...AGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGCCTCGGGGCCAATGAGCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGCCAGAGCCTCTCGGATaGCCCAAAGGCGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVPEPLG*PKGGCS
Trigger: GCTGCAGCCGCCTTTGGGCCATCCGAGAGGCTCTGG...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAAGCCGCCCCTGGGGGTaGGTCAGTGCCCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: PPPVCGWPSEAPDVPCGRSRPWG*VSAHPV
Trigger: CACAGGGTGGGCACTGACCCACCCCCAGGGGCGGCT...TCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGACTCTGCAGCCGCCCCTaGGGGTGGGTCAGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: PPPVCGWPSEAPDVPCGRLCSRP*GWVSAH
Trigger: GTGGGCACTGACCCACCCCCAGGGGCGGCTGCAGAG...TCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAGGGAAGAGGCGCTCATTaGCCCCGAGGCCCCGGACCC +
Preference number: 4 (lower is better)
Translates to: LPQSAGGPQRHLTCPVGEGRGAH*PRGPGP
Trigger: GGGTCCGGGGCCTCGGGGCCAATGAGCGCCTCTTCC...CTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp GCGAGGGGTGGGCCCTTCTCACCCTCTCTGTTCCCGTGGAGCGAGTGTGGAGCGCGCTGGAGCGCTCCTTaGGCTGCGGGTCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: ARGGPFSPSLFPWSECGARWSAP*AAGRWG
Trigger: TCCCCACCGACCCGCAGCTCAAGGAGCGCTCCAGCG...CGCTCCACACTCGCTCCACGGGAACAGAGAGGGTGAGAAGGGCCCACCCCTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR TCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGGGGTACGTAGCTCCGTaGCGAGGTCGTCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVGYVAP*RGRLQP
Trigger: AGGCTGCAGACGACCTCGTCACGGAGCTACGTACCC...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR TCA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGGCACCCCCGTCCCTGTaGGCCCTGGCCCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLAPPSL*ALAPSW
Trigger: CCAAGAAGGGGCCAGGGCTCACAGGGACGGGGGTGC...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGGGCTCGGCTCACGGTTaGTCCCTAAAGCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVGSAHG*SLKHRG
Trigger: GCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCC...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAAGGCCGCCGTGTGGGAGCCCAGAGCCCGTaGCGATCCGCGCTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QTHGSERVLSPFGKGRRVGAQSP*RSALRS
Trigger: GGAGCGGAGCGCGGATCGGCACGGGCTCTGGGCTCC...CACACGGCGGCCTTTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCGCTCTGCTCCATTGCTaGCCTGGGCCTGCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: SAPADTQARGVATSFQEAALLHC*PGPALL
Trigger: CAAAAGGGCAGGCCCAGGCCAGCAATGGAGCAGAGC...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp GCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGACGCGGTGCTGAGAGGGCGTGTCGTACTTaGCGCGCAGCCTCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: AGVSGREQQAGPYRRGAERACRT*RAASGS
Trigger: GCTGCCCGAGGCTGCGCGCCAAGTACGACACGCCCT...CTCAGCACCGCGTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCCGGTTTCTGGGTGGATaGCGTCGACACGGCAATCCC +
Preference number: 4 (lower is better)
Translates to: SAPADTQARGVATSFQEARFLGG*RRHGNP
Trigger: GGGATTGCCGTGTCGACGCCATCCACCCAGAAACCG...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAGCCCCCAGTCTGCGGGTaGCCCTCAGAGGCACCTGAC +
Preference number: 4 (lower is better)
Translates to: LPQSAGGPQRHLTCPVGEPPVCG*PSEAPD
Trigger: GTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGG...CTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGCCCTCTCTGTTCCCGTaGAGCGAGTGTGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVPSLFP*SECGAQ
Trigger: CTGCGCTCCACACTCGCTCCACGGGAACAGAGAGGG...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGACGCGGTGCTGAGGCAGGCCCAGGCCTCTaGGCTCGGCTCACGGTTGCT +
Preference number: 4 (lower is better)
Translates to: AGVSGREQQAGPYRRGAEAGPGL*ARLTVA
Trigger: AGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTGC...CTCAGCACCGCGTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAGTGCAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGCGCAGGCCCGCGGGGTaGCCACCTCCTTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: QCRPRPLGSAHGCSLKHRRRPAG*PPPSRR
Trigger: CCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCG...CCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTGCACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGAGCCGCCCCTGGGGGTaGGTCAGTGCCCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLSRPWG*VSAHPV
Trigger: CACAGGGTGGGCACTGACCCACCCCCAGGGGCGGCT...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCGCCAGACGCTGCCGCTaGGGTGATCTTGATGTACTG +
Preference number: 4 (lower is better)
Translates to: SAPADTQARGVATSFQEAARRCR*GDLDVL
Trigger: CAGTACATCAAGATCACCTCAGCGGCAGCGTCTGGC...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACGCCCTCAGAGGCACCTaGCGTGCCCTGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SAAPREGGETSPCRRIPHALRGT*RALWER
Trigger: CCTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGC...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp CTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAGGGACTCAGGACAAGCTaGGGGAGCTGCGGGATCCGC +
Preference number: 4 (lower is better)
Translates to: LPQSAGGPQRHLTCPVGEGLRTS*GSCGIR
Trigger: GCGGATCCCGCAGCTCCCTCAGCTTGTCCTGAGTCC...CTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp GCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGACGCGGTGCTGAGGCCGTGTGGTCATCCTaGCGCCAACGTCCGCGCAGT +
Preference number: 4 (lower is better)
Translates to: AGVSGREQQAGPYRRGAEAVWSS*RQRPRS
Trigger: ACTGCGCGGACGTTGGCGTCAGGATGACCACACGGC...CTCAGCACCGCGTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCGGGGGATTTCGTCGCTaGATTCGGTGTCCGAGGCAT +
Preference number: 4 (lower is better)
Translates to: SAPADTQARGVATSFQEAGGFRR*IRCPRH
Trigger: ATGCCTCGGACACCGAATGCAGCGACGAAATCCCCC...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp AGGCGCTCATTGGCCCCGAGGCCCCGGACCCATCCTTGGGCACTGCCGGGCCCTAGCCTGGGGGCCATGTaGCAGACATGCCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: RRSLAPRPRTHPWALPGPSLGAM*QTCHSA
Trigger: AGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCT...AGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGCCTCGGGGCCAATGAGCGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CCGTGTGGTCATCCTGACGCCAACGTCCGCGCAGTCCAGAGCCACGGGGGCTCCGGAGAGGGTGGTGTCTaGTGCCCTGGAGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PCGHPDANVRAVQSHGGSGEGGV*CPGAWR
Trigger: CCTCCAGGCTCCAGGGCAGCAGACACCACCCTCTCC...GGAGCCCCCGTGGCTCTGGACTGCGCGGACGTTGGCGTCAGGATGACCACACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406902.6
CDS-3UTR CCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGAGGTTCTGGGCTTTCTaGGCGACGTCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVRFWAF*ATSSTS
Trigger: GCTGGTGCTGGACGTCGCCCAGAAAGCCCAGAACCT...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp GCGAGGGGTGGGCCCTTCTCACCCTCTCTGTTCCCGTGGAGCGAGTGTGGAGCGAGGGCGTGTCGTACTTaGCGCGCAGCCTCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ARGGPFSPSLFPWSECGARACRT*RAASGS
Trigger: GCTGCCCGAGGCTGCGCGCCAAGTACGACACGCCCT...CGCTCCACACTCGCTCCACGGGAACAGAGAGGGTGAGAAGGGCCCACCCCTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACCCCCCAGTCTGCGGGTaGCCCTCAGAGGCACCTGAC +
Preference number: 4 (lower is better)
Translates to: SAAPREGGETSPCRRIPHPPVCG*PSEAPD
Trigger: GTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGG...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGACCCGTGGAGCGAGTGTaGAGCGCAGGCAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: PPPVCGWPSEAPDVPCGRPVERV*SAGRVT
Trigger: AGTGACCCTGCCTGCGCTCCACACTCGCTCCACGGG...TCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCGTGTGGTCATCCTGACGCCAACGTCCGCGCAGTCCAGAGCCACGGGGGCTCCCCCGTGGAGCGAGTGTaGAGCGCAGGCAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: PCGHPDANVRAVQSHGGSPVERV*SAGRVT
Trigger: AGTGACCCTGCCTGCGCTCCACACTCGCTCCACGGG...GGAGCCCCCGTGGCTCTGGACTGCGCGGACGTTGGCGTCAGGATGACCACACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCGTGTGGTCATCCTGACGCCAACGTCCGCGCAGTCCAGAGCCACGGGGGCTCCCAGCCTGGGCCACCATaGTCCCGGAACACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PCGHPDANVRAVQSHGGSQPGPP*SRNTPP
Trigger: GGGAGGAGTGTTCCGGGACCATGGTGGCCCAGGCTG...GGAGCCCCCGTGGCTCTGGACTGCGCGGACGTTGGCGTCAGGATGACCACACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGGAGCACCTCCAACAGCCTCGCAGGCCCGCGGGGTaGCCACCTCCTTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PGGHVPDMPQCSEHLQQPRRPAG*PPPSRR
Trigger: CCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCG...AGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGCTGGGGAGAGAGGTGTaGCCATTGTCTGCGGGCACT +
Preference number: 4 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVLGREV*PLSAGT
Trigger: AGTGCCCGCAGACAATGGCCACACCTCTCTCCCCAG...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CAA 72 bp ACCAGGCCTGCGGGCGCTCCCTCCACAAATGCCACCTaGTTCCCGGGAAGCCCAGGCTTCCCTGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TRPAGAPSTNAT*FPGSPGFPGAG
Trigger: CCCTGCCCCAGGGAAGCCTGGGCTTCCCGGGAACAAGGTGGCATTTGTGGAGGGAGCGCCCGCAGGCCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACGGACTCAGGACAAGCTaGGGGAGCTGCGGGATCCGC +
Preference number: 4 (lower is better)
Translates to: SAAPREGGETSPCRRIPHGLRTS*GSCGIR
Trigger: GCGGATCCCGCAGCTCCCTCAGCTTGTCCTGAGTCC...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp GCGAGGGGTGGGCCCTTCTCACCCTCTCTGTTCCCGTGGAGCGAGTGTGGAGCGGCCGTGTGGTCATCCTaGCGCCAACGTCCGCGCAGT +
Preference number: 4 (lower is better)
Translates to: ARGGPFSPSLFPWSECGAAVWSS*RQRPRS
Trigger: ACTGCGCGGACGTTGGCGTCAGGATGACCACACGGC...CGCTCCACACTCGCTCCACGGGAACAGAGAGGGTGAGAAGGGCCCACCCCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACTCGCGGTCCAGCTCCTaGCGCAGCATCTCCGCGTTG +
Preference number: 4 (lower is better)
Translates to: SAAPREGGETSPCRRIPHSRSSS*RSISAL
Trigger: CAACGCGGAGATGCTGCGGCAGGAGCTGGACCGCGA...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp CCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGGAGCACCTCCAACAGCCTAGCTCCATCCGCCGCTaGCGCTCGCGGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PGGHVPDMPQCSEHLQQPSSIRR*RSRSSS
Trigger: GGAGCTGGACCGCGAGCGGCAGCGGCGGATGGAGCT...AGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGGGCGCTCTGCTCCATTaGTGGCCTGGGCCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLGALLH*WPGPAL
Trigger: AAGGGCAGGCCCAGGCCAGCAATGGAGCAGAGCGCC...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGGAGCGCTCCTTGAGCTaGGGGTCGGTGGGGAGACTC +
Preference number: 4 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLERSLS*GSVGRL
Trigger: GAGTCTCCCCACCGACCCGCAGCTCAAGGAGCGCTC...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp GCGAGGGGTGGGCCCTTCTCACCCTCTCTGTTCCCGTGGAGCGAGTGTGGAGCGCTGTCGCATGTCGGCTaGAGGCAGTGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ARGGPFSPSLFPWSECGALSHVG*RQCRPR
Trigger: CCTGGGCCTGCACTGCCTGCAGCCGACATGCGACAG...CGCTCCACACTCGCTCCACGGGAACAGAGAGGGTGAGAAGGGCCCACCCCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp GCGAGGGGTGGGCCCTTCTCACCCTCTCTGTTCCCGTGGAGCGAGTGTGGAGCGCCAGCAGACCAGGCCTaGGGGCGCTCCCTCCACAAA +
Preference number: 4 (lower is better)
Translates to: ARGGPFSPSLFPWSECGAPADQA*GRSLHK
Trigger: TTTGTGGAGGGAGCGCCCGCAGGCCTGGTCTGCTGG...CGCTCCACACTCGCTCCACGGGAACAGAGAGGGTGAGAAGGGCCCACCCCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAGGGTGTGGCCATTGTCTaGGGGCACTGCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPQSAGGPQRHLTCPVGEGVAIV*GHCLCS
Trigger: GCTGCAGAGGCAGTGCCCGCAGACAATGGCCACACC...CTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACGCTCCATTGCTGGCCTaGGCCTGCCCTTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SAAPREGGETSPCRRIPHAPLLA*ACPFGG
Trigger: GCCCCCAAAAGGGCAGGCCCAGGCCAGCAATGGAGC...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp CCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGGAGCACCTCCAACAGCCTCGCGAGGACAGCCCCTaGCTCCGGCGCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PGGHVPDMPQCSEHLQQPREDSP*LRRSAP
Trigger: TGGAGCAGAGCGCCGGAGCCAGGGGCTGTCCTCGCG...AGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTCGCGAGGACAGCCCCTaGCTCCGGCGCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPREDSP*LRRSAP
Trigger: TGGAGCAGAGCGCCGGAGCCAGGGGCTGTCCTCGCG...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTGGCCGGCCGGTGCGCTaGGTACGTAGCTCCGTGACG +
Preference number: 4 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPGRPVR*VRSSVT
Trigger: CGTCACGGAGCTACGTACCCAGCGCACCGGCCGGCC...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp AGGCGCTCATTGGCCCCGAGGCCCCGGACCCATCCTTGGGCACTGCCGGGCCCTAGGCCCGTTTCTCGGTaGTTGGTGAAAGGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: RRSLAPRPRTHPWALPGPRPVSR*LVKGPH
Trigger: ATGGGGGCCTTTCACCAACCACCGAGAAACGGGCCT...AGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGCCTCGGGGCCAATGAGCGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GCGAGGGGTGGGCCCTTCTCACCCTCTCTGTTCCCGTGGAGCGAGTGTGGAGCGCAGCTACAGACCTCCTaGCCGGCGTGTCAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: ARGGPFSPSLFPWSECGAQLQTS*PACQAE
Trigger: CTCGGCCTGACACGCCGGCCAGGAGGTCTGTAGCTG...CGCTCCACACTCGCTCCACGGGAACAGAGAGGGTGAGAAGGGCCCACCCCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGACCTCCTGGCCGGCGTGGGAAGAGGCGCTCATTaGCCCCGAGGCCCCGGACCC +
Preference number: 4 (lower is better)
Translates to: CTILCPYWSPATDLLAGVGRGAH*PRGPGP
Trigger: GGGTCCGGGGCCTCGGGGCCAATGAGCGCCTCTTCC...CACGCCGGCCAGGAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTGCCCTCAGAGGCACCTaGCGTGCCCTGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPALRGT*RALWER
Trigger: CCTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGC...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp CAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAAGGCCGCCGTGTGGCCGTGTGGTCATCCTaGCGCCAACGTCCGCGCAGT +
Preference number: 4 (lower is better)
Translates to: QTHGSERVLSPFGKGRRVAVWSS*RQRPRS
Trigger: ACTGCGCGGACGTTGGCGTCAGGATGACCACACGGC...CACACGGCGGCCTTTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp GGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGCCAGAGCCTCTCGGATGGCCCGGCGCTCTGCTCCATTaGTGGCCTGGGCCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GSRLLPKAQGLPEPLGWPGALLH*WPGPAL
Trigger: AAGGGCAGGCCCAGGCCAGCAATGGAGCAGAGCGCC...GGGCCATCCGAGAGGCTCTGGCAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp CAACCCAGGCAACCGCAGCCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGCAGAGGCACCTGACGTaGCCTGTGGGAGAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: QPRQPQPGGHVPDMPQCSQRHLT*PVGEGH
Trigger: GTGCCCCTCTCCCACAGGGCACGTCAGGTGCCTCTG...CGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGGGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CAACCCAGGCAACCGCAGCCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGGTCCCCCTCCCCTGGTaGACCAAGAGAGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: QPRQPQPGGHVPDMPQCSVPLPW*TKRASP
Trigger: GGGACTGGCTCTCTTGGTGCACCAGGGGAGGGGGAC...CGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGGGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGACATGATGAGGGTCCCTaGACCAGCAGGGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PPPVCGWPSEAPDVPCGRHDEGP*TSRVPQ
Trigger: CTGAGGGACCCTGCTGGTCCAGGGACCCTCATCATG...TCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp GCGAGGGGTGGGCCCTTCTCACCCTCTCTGTTCCCGTGGAGCGAGTGTGGAGCGCCCTTCTTGGTGCTGTaGAAGCGACCGGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ARGGPFSPSLFPWSECGAPFLVL*KRPASS
Trigger: GGAGGACGCCGGTCGCTTCCACAGCACCAAGAAGGG...CGCTCCACACTCGCTCCACGGGAACAGAGAGGGTGAGAAGGGCCCACCCCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp CTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAGCGAGCGGTTTCTGGGTaGATGGCGTCGACACGGCAA +
Preference number: 4 (lower is better)
Translates to: LPQSAGGPQRHLTCPVGERAVSG*MASTRQ
Trigger: TTGCCGTGTCGACGCCATCCACCCAGAAACCGCTCG...CTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGACCTCCTGGCCGGCGTGCCCCCAGTCTGCGGGTaGCCCTCAGAGGCACCTGAC +
Preference number: 4 (lower is better)
Translates to: CTILCPYWSPATDLLAGVPPVCG*PSEAPD
Trigger: GTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGG...CACGCCGGCCAGGAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGGTTGCGAGAACCTCTTaGGGTGGCTGGAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVVARTS*GGWRGF
Trigger: GAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAAC...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCGTGTGGTCATCCTGACGCCAACGTCCGCGCAGTCCAGAGCCACGGGGGCTCCCTGGGGAGAGAGGTGTaGCCATTGTCTGCGGGCACT +
Preference number: 4 (lower is better)
Translates to: PCGHPDANVRAVQSHGGSLGREV*PLSAGT
Trigger: AGTGCCCGCAGACAATGGCCACACCTCTCTCCCCAG...GGAGCCCCCGTGGCTCTGGACTGCGCGGACGTTGGCGTCAGGATGACCACACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp CCTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAAGAGCACCCCGTTCCTaGTGTAGTCCGTGGGCATCT +
Preference number: 4 (lower is better)
Translates to: PPPVCGWPSEAPDVPCGRRAPRS*CSPWAS
Trigger: AGATGCCCACGGACTACATCAGGAACGGGGTGCTCT...TCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGACAAGTAATTCTCCGTaGCGTAGAGCACCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVTSNSP*RRAPRS
Trigger: GGAACGGGGTGCTCTACGTCACGGAGAATTACTTGT...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp GCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGACGCGGTGCTGAGGCCAGACGCTGCCGCTaGGGTGATCTTGATGTACTG +
Preference number: 4 (lower is better)
Translates to: AGVSGREQQAGPYRRGAEARRCR*GDLDVL
Trigger: CAGTACATCAAGATCACCTCAGCGGCAGCGTCTGGC...CTCAGCACCGCGTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGGCCTTCAGCACCTCCTaGACCTTCTGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLAFSTS*TFCSSS
Trigger: GGAGCTGGAGCAGAAGGTGCAGGAGGTGCTGAAGGC...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp GCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGACGCGGTGCTGAGAGCGGGACACAAGGTTaGGAGAACCTCTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AGVSGREQQAGPYRRGAESGTQG*ENLLGW
Trigger: CCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCT...CTCAGCACCGCGTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp GCGAGGGGTGGGCCCTTCTCACCCTCTCTGTTCCCGTGGAGCGAGTGTGGAGCGAGCCTGGGGGCCATGTaGCAGACATGCCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: ARGGPFSPSLFPWSECGASLGAM*QTCHSA
Trigger: AGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCT...CGCTCCACACTCGCTCCACGGGAACAGAGAGGGTGAGAAGGGCCCACCCCTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTTGGCCCAAAGGCGGCTaGAGCCTGGGCCACCATGGT +
Preference number: 4 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPWPKGG*SLGHHG
Trigger: ACCATGGTGGCCCAGGCTGCAGCCGCCTTTGGGCCA...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp TGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGACCTCCTGGCCGGCGTGTGGCCCAAAGGCGGCTaGAGCCTGGGCCACCATGGT +
Preference number: 4 (lower is better)
Translates to: CTILCPYWSPATDLLAGVWPKGG*SLGHHG
Trigger: ACCATGGTGGCCCAGGCTGCAGCCGCCTTTGGGCCA...CACGCCGGCCAGGAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CTCTGGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTGTCGGCTGCAGGCAGTaGAGGCCCAGGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LWRAGHKVARTSWGGWRGVGCRQ*RPRPLG
Trigger: GCCCAGAGGCCTGGGCCTGCACTGCCTGCAGCCGAC...ACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAGCGCTCCCTCCACAAATaGCACCTTGTTCCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: LPQSAGGPQRHLTCPVGERSLHK*HLVPGK
Trigger: CTTCCCGGGAACAAGGTGGCATTTGTGGAGGGAGCG...CTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTGTGCCCACCCTGTGTTaGCTCAGGCGCCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPVPTLC*LRRQGG
Trigger: CCCACCTTGGCGCCTGAGGCAACACAGGGTGGGCAC...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAAGGCCGCCGTGTGCTGGGGGTGGGTCAGTaGCCACCCTGTGTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: QTHGSERVLSPFGKGRRVLGVGQ*PPCVAS
Trigger: TGAGGCAACACAGGGTGGGCACTGACCCACCCCCAG...CACACGGCGGCCTTTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAAGGCCGCCGTGTGCTGGGCCTGCCCTTTTaGGGGCTGCTGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: QTHGSERVLSPFGKGRRVLGLPF*GLLSHL
Trigger: CAGATGGCTCAGCAGCCCCCAAAAGGGCAGGCCCAG...CACACGGCGGCCTTTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp AGGCGCTCATTGGCCCCGAGGCCCCGGACCCATCCTTGGGCACTGCCGGGCCCTAGTCAGGTCTTCCTTTaGAGGTTCCACGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: RRSLAPRPRTHPWALPGPSQVFL*RFHGLR
Trigger: TCTGAGCCCGTGGAACCTCCAAAGGAAGACCTGACT...AGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGCCTCGGGGCCAATGAGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGAGTCAGGTCTTCCTTTaGAGGTTCCACGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVSQVFL*RFHGLR
Trigger: TCTGAGCCCGTGGAACCTCCAAAGGAAGACCTGACT...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGCGGTTTCTGGGTGGATaGCGTCGACACGGCAATCCC +
Preference number: 4 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLRFLGG*RRHGNP
Trigger: GGGATTGCCGTGTCGACGCCATCCACCCAGAAACCG...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp AGGCGCTCATTGGCCCCGAGGCCCCGGACCCATCCTTGGGCACTGCCGGGCCCTCTTCAGCTATGGCTTTaGTGGTGGACGAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RRSLAPRPRTHPWALPGPLQLWL*WWTSFW
Trigger: CCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAG...AGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGCCTCGGGGCCAATGAGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGACCTCCTGGCCGGCGTGCAGCTACAGACCTCCTaGCCGGCGTGTCAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: CTILCPYWSPATDLLAGVQLQTS*PACQAE
Trigger: CTCGGCCTGACACGCCGGCCAGGAGGTCTGTAGCTG...CACGCCGGCCAGGAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTCAGCCTGGGCCACCATaGTCCCGGAACACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPQPGPP*SRNTPP
Trigger: GGGAGGAGTGTTCCGGGACCATGGTGGCCCAGGCTG...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTCCAGAGCCTCTCGGATaGCCCAAAGGCGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPPEPLG*PKGGCS
Trigger: GCTGCAGCCGCCTTTGGGCCATCCGAGAGGCTCTGG...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACCTGGGGAGAGAGGTGTaGCCATTGTCTGCGGGCACT +
Preference number: 4 (lower is better)
Translates to: SAAPREGGETSPCRRIPHLGREV*PLSAGT
Trigger: AGTGCCCGCAGACAATGGCCACACCTCTCTCCCCAG...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTGAATGTGGCCCTCCCTaGGGGCTTCGGCCACACCTG +
Preference number: 4 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPECGPP*GLRPHL
Trigger: CAGGTGTGGCCGAAGCCCCCAGGGAGGGCCACATTC...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp CACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGGCGTCTGCAGCCTGCGTaGGACTGCGGCGCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: HSSAMALVVDELLASGERRLQPA*DCGAGA
Trigger: CGCTCCAGCGCCGCAGTCTCACGCAGGCTGCAGACG...CCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR TCA 90 bp AATGCCACAGGAGGGTCTCATGTAAGAGGAAGGAGGGCCGCCAGGCCCGTTTCTGCACCCCCGTCCCTGTaGGCCCTGGCCCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: NATGGSHVRGRRAARPVSAPPSL*ALAPSW
Trigger: CCAAGAAGGGGCCAGGGCTCACAGGGACGGGGGTGC...AGAAACGGGCCTGGCGGCCCTCCTTCCTCTTACATGAGACCCTCCTGTGGCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGTTTCTCGGTGGTTGGTaGAAGGCCCCCATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLFLGGW*KAPMSL
Trigger: GAGGGACATGGGGGCCTTTCACCAACCACCGAGAAA...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGACACTTCGGGCACGATaGTCCACTGTATCCGCCACC +
Preference number: 4 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLTLRAR*STVSAT
Trigger: GGTGGCGGATACAGTGGAGCATCGTGCCCGAAGTGT...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp GGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGCCAGAGCCTCTCGGATGGCCCAGCCTGGGGGCCATGTaGCAGACATGCCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: GSRLLPKAQGLPEPLGWPSLGAM*QTCHSA
Trigger: AGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCT...GGGCCATCCGAGAGGCTCTGGCAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGGAGCACCTCCAACAGCCTGGCTCGGCTCACGGTTaGTCCCTAAAGCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: PGGHVPDMPQCSEHLQQPGSAHG*SLKHRG
Trigger: GCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCC...AGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CCCCTACAGGAGCCAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAGGTGTGGCCATTGTCTaGGGGCACTGCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PLQEPDPRLRAGSVPIREGVAIV*GHCLCS
Trigger: GCTGCAGAGGCAGTGCCCGCAGACAATGGCCACACC...TTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTGGCTCCTGTAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CTCTGGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTCCCATCCTTGGGCACTaGCGGGCCCTGGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LWRAGHKVARTSWGGWRGPILGH*RALGRE
Trigger: CTCTCTCCCCAGGGCCCGGCAGTGCCCAAGGATGGG...ACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGACGCGGTGCTGAGTTCCCGAAAAGGTTCTaGGCTTTCTGGGCGACGTCC +
Preference number: 4 (lower is better)
Translates to: AGVSGREQQAGPYRRGAEFPKRF*AFWATS
Trigger: GGACGTCGCCCAGAAAGCCCAGAACCTTTTCGGGAA...CTCAGCACCGCGTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp GCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGACGCGGTGCTGAGGGAAATTGCCCTTCTTaGTGCTGTGGAAGCGACCGG +
Preference number: 4 (lower is better)
Translates to: AGVSGREQQAGPYRRGAEGNCPS*CCGSDR
Trigger: CCGGTCGCTTCCACAGCACCAAGAAGGGCAATTTCC...CTCAGCACCGCGTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCAGGACCTTGTACTTCTaGATGTCCGTGATGTCCACT +
Preference number: 4 (lower is better)
Translates to: SAPADTQARGVATSFQEARTLYF*MSVMST
Trigger: AGTGGACATCACGGACATCCAGAAGTACAAGGTCCT...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGCCAGAGCCTCTCGGATGGCCCCGAGCGGTTTCTGGGTaGATGGCGTCGACACGGCAA +
Preference number: 4 (lower is better)
Translates to: GSRLLPKAQGLPEPLGWPRAVSG*MASTRQ
Trigger: TTGCCGTGTCGACGCCATCCACCCAGAAACCGCTCG...GGGCCATCCGAGAGGCTCTGGCAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCGTGTGGTCATCCTGACGCCAACGTCCGCGCAGTCCAGAGCCACGGGGGCTCCCATCCCTGTGCACCATaGCACCAAACACGAGCGGTT +
Preference number: 4 (lower is better)
Translates to: PCGHPDANVRAVQSHGGSHPCAP*HQTRAV
Trigger: AACCGCTCGTGTTTGGTGCCATGGTGCACAGGGATG...GGAGCCCCCGTGGCTCTGGACTGCGCGGACGTTGGCGTCAGGATGACCACACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGACATCCCTGTGCACCATaGCACCAAACACGAGCGGTT +
Preference number: 4 (lower is better)
Translates to: PPPVCGWPSEAPDVPCGRHPCAP*HQTRAV
Trigger: AACCGCTCGTGTTTGGTGCCATGGTGCACAGGGATG...TCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGCCAGAGCCTCTCGGATGGCCCTGGTGGACGAGCTTCTaGCCTCTGGAGAGCGGGACA +
Preference number: 4 (lower is better)
Translates to: GSRLLPKAQGLPEPLGWPWWTSF*PLESGT
Trigger: TGTCCCGCTCTCCAGAGGCCAGAAGCTCGTCCACCA...GGGCCATCCGAGAGGCTCTGGCAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAGCAGCTATGGCTTTGGTaGTGGACGAGCTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LPQSAGGPQRHLTCPVGEQLWLW*WTSFWP
Trigger: AGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTG...CTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAATCCTGTGCCCTTACTaGTCCCCAGCTACAGACCTC +
Preference number: 4 (lower is better)
Translates to: PPPVCGWPSEAPDVPCGRILCPY*SPATDL
Trigger: GAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGAT...TCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CTCTGGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTGCAGGCCCAGGCCTCTaGGCTCGGCTCACGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LWRAGHKVARTSWGGWRGAGPGL*ARLTVA
Trigger: AGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTGC...ACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACTATGTCCCCCTCCCCTaGTGCACCAAGAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SAAPREGGETSPCRRIPHYVPLP*CTKRAS
Trigger: ACTGGCTCTCTTGGTGCACCAGGGGAGGGGGACATA...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGCCTCAGGCGCCAAGGTaGGGTTCACTGGGATATGTC +
Preference number: 4 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLPQAPR*GSLGYV
Trigger: GACATATCCCAGTGAACCCCACCTTGGCGCCTGAGG...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGGCTCTGCAGCCGCCCCTaGGGGTGGGTCAGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: HSSAMALVVDELLASGERLCSRP*GWVSAH
Trigger: GTGGGCACTGACCCACCCCCAGGGGCGGCTGCAGAG...CCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CAA 72 bp CCAGGAGGAAGGGCCCCGCACTCTTCAGCTATGGCTTaGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGG +
Preference number: 4 (lower is better)
Translates to: PGGRAPHSSAMA*VVDELLASGER
Trigger: CCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCGGGGCCCTTCCTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp CAGTGCAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGCCAGACGCTGCCGCTaGGGTGATCTTGATGTACTG +
Preference number: 4 (lower is better)
Translates to: QCRPRPLGSAHGCSLKHRARRCR*GDLDVL
Trigger: CAGTACATCAAGATCACCTCAGCGGCAGCGTCTGGC...CCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTGCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp GGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGCCAGAGCCTCTCGGATGGCCCCCCCATGTCCCTCCTTaGCGACATCTTTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: GSRLLPKAQGLPEPLGWPPHVPP*RHLSVP
Trigger: GGGGACAGAAAGATGTCGTCAAGGAGGGACATGGGG...GGGCCATCCGAGAGGCTCTGGCAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp AGGAAGGGCCCCGCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCGGACTCAGGACAAGCTaGGGGAGCTGCGGGATCCGC +
Preference number: 4 (lower is better)
Translates to: RKGPALFSYGFGGGRASGGLRTS*GSCGIR
Trigger: GCGGATCCCGCAGCTCCCTCAGCTTGTCCTGAGTCC...GCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCGGGGCCCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CAGTGCAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGGATGGCCCAGCCATaGCACACGGCATTCATGTAC +
Preference number: 4 (lower is better)
Translates to: QCRPRPLGSAHGCSLKHRGMAQP*HTAFMY
Trigger: GTACATGAATGCCGTGTGGCATGGCTGGGCCATCCC...CCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTGCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp CAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAAGGCCGCCGTGTGGGGATGGCCCAGCCATaGCACACGGCATTCATGTAC +
Preference number: 4 (lower is better)
Translates to: QTHGSERVLSPFGKGRRVGMAQP*HTAFMY
Trigger: GTACATGAATGCCGTGTGGCATGGCTGGGCCATCCC...CACACGGCGGCCTTTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp CAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAAGGCCGCCGTGTGAGCGGGACACAAGGTTaGGAGAACCTCTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QTHGSERVLSPFGKGRRVSGTQG*ENLLGW
Trigger: CCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCT...CACACGGCGGCCTTTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGGGCACCAAGGGCAAATaGCACAGGAGGGTCTCATGT +
Preference number: 4 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLGTKGK*HRRVSC
Trigger: ACATGAGACCCTCCTGTGGCATTTGCCCTTGGTGCC...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACGGCACCAAGGGCAAATaGCACAGGAGGGTCTCATGT +
Preference number: 4 (lower is better)
Translates to: SAAPREGGETSPCRRIPHGTKGK*HRRVSC
Trigger: ACATGAGACCCTCCTGTGGCATTTGCCCTTGGTGCC...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGAGATGTGCTTTTACCTaGACCATCCTGTGCCCTTAC +
Preference number: 4 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVRCAFT*TILCPY
Trigger: GTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCT...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CAGTGCAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGCCAGACATGCCACAGTaGTCGGAGCACCTCCAACAG +
Preference number: 4 (lower is better)
Translates to: QCRPRPLGSAHGCSLKHRPDMPQ*SEHLQQ
Trigger: CTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGG...CCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTGCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CAACCCAGGCAACCGCAGCCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGCGCTCCCTCCACAAATaGCACCTTGTTCCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: QPRQPQPGGHVPDMPQCSRSLHK*HLVPGK
Trigger: CTTCCCGGGAACAAGGTGGCATTTGTGGAGGGAGCG...CGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CTCTGGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTCCAGCAGACCAGGCCTaGGGGCGCTCCCTCCACAAA +
Preference number: 4 (lower is better)
Translates to: LWRAGHKVARTSWGGWRGPADQA*GRSLHK
Trigger: TTTGTGGAGGGAGCGCCCGCAGGCCTGGTCTGCTGG...ACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CTCTGGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTGTCCCCCTCCCCTGGTaGACCAAGAGAGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LWRAGHKVARTSWGGWRGVPLPW*TKRASP
Trigger: GGGACTGGCTCTCTTGGTGCACCAGGGGAGGGGGAC...ACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAGTCCGGTTAAAGTCCTaGACTCCTGTGGCCATGATG +
Preference number: 4 (lower is better)
Translates to: PPPVCGWPSEAPDVPCGRVRLKS*TPVAMM
Trigger: CATCATGGCCACAGGAGTCCAGGACTTTAACCGGAC...TCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp AGGAAGGGCCCCGCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCGCTCCATTGCTGGCCTaGGCCTGCCCTTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RKGPALFSYGFGGGRASGAPLLA*ACPFGG
Trigger: GCCCCCAAAAGGGCAGGCCCAGGCCAGCAATGGAGC...GCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCGGGGCCCTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp CCGTGTGGTCATCCTGACGCCAACGTCCGCGCAGTCCAGAGCCACGGGGGCTCCACGTCCAGCACCAGCTaGAACTTCTCAGACACAGTC +
Preference number: 4 (lower is better)
Translates to: PCGHPDANVRAVQSHGGSTSSTS*NFSDTV
Trigger: GACTGTGTCTGAGAAGTTCCAGCTGGTGCTGGACGT...GGAGCCCCCGTGGCTCTGGACTGCGCGGACGTTGGCGTCAGGATGACCACACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp CAACCCAGGCAACCGCAGCCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGAACACGAGCGGTTTCTaGGTGGATGGCGTCGACACG +
Preference number: 4 (lower is better)
Translates to: QPRQPQPGGHVPDMPQCSNTSGF*VDGVDT
Trigger: CGTGTCGACGCCATCCACCCAGAAACCGCTCGTGTT...CGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GCGAGGGGTGGGCCCTTCTCACCCTCTCTGTTCCCGTGGAGCGAGTGTGGAGCGGCCCTGGCCCCTTCTTaGTCGATAAAACGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: ARGGPFSPSLFPWSECGAALAPS*SIKRRG
Trigger: ACCTCTGCGTTTTATCGACCAAGAAGGGGCCAGGGC...CGCTCCACACTCGCTCCACGGGAACAGAGAGGGTGAGAAGGGCCCACCCCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGCCAGAGCCTCTCGGATGGCCCCGAGCTTCTGGCCTCTaGAGAGCGGGACACAAGGTT +
Preference number: 4 (lower is better)
Translates to: GSRLLPKAQGLPEPLGWPRASGL*RAGHKV
Trigger: AACCTTGTGTCCCGCTCTCCAGAGGCCAGAAGCTCG...GGGCCATCCGAGAGGCTCTGGCAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GCGAGGGGTGGGCCCTTCTCACCCTCTCTGTTCCCGTGGAGCGAGTGTGGAGCGCTATGGCTTTGGTGGTaGACGAGCTTCTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ARGGPFSPSLFPWSECGALWLWW*TSFWPL
Trigger: CAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAG...CGCTCCACACTCGCTCCACGGGAACAGAGAGGGTGAGAAGGGCCCACCCCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAAGGCCGCCGTGTGAGGCCCGTTTCTCGGTaGTTGGTGAAAGGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: QTHGSERVLSPFGKGRRVRPVSR*LVKGPH
Trigger: ATGGGGGCCTTTCACCAACCACCGAGAAACGGGCCT...CACACGGCGGCCTTTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CTCTGGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTCCAGAGCCTCTCGGATaGCCCAAAGGCGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LWRAGHKVARTSWGGWRGPEPLG*PKGGCS
Trigger: GCTGCAGCCGCCTTTGGGCCATCCGAGAGGCTCTGG...ACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTTTCTCTGGCAGGCCCAGGCCTCTaGGCTCGGCTCACGGTTGCT +
Preference number: 4 (lower is better)
Translates to: ERDTRLREPLGVAGEVSLAGPGL*ARLTVA
Trigger: AGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTGC...CAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAGTGCAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGCCTCAGGCGCCAAGGTaGGGTTCACTGGGATATGTC +
Preference number: 4 (lower is better)
Translates to: QCRPRPLGSAHGCSLKHRPQAPR*GSLGYV
Trigger: GACATATCCCAGTGAACCCCACCTTGGCGCCTGAGG...CCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTGCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCCCCCGGACCCATCCTTaGGCACTGCCGGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFPRTHP*ALPGPG
Trigger: CCCAGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGG...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGACCTCCTGGCCGGCGTGCCCTCCCGCTGTGTTTaGGGACTGAATCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: CTILCPYWSPATDLLAGVPSRCV*GLNPST
Trigger: GGTGCTGGGATTCAGTCCCCAAACACAGCGGGAGGG...CACGCCGGCCAGGAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCGTGTGGTCATCCTGACGCCAACGTCCGCGCAGTCCAGAGCCACGGGGGCTCCGCCACACCTGGCACGTaGTCAGTTTTCATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PCGHPDANVRAVQSHGGSATPGT*SVFISL
Trigger: AAGGGAGATGAAAACTGACCACGTGCCAGGTGTGGC...GGAGCCCCCGTGGCTCTGGACTGCGCGGACGTTGGCGTCAGGATGACCACACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACGGCTTCGGCCACACCTaGCACGTGGTCAGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: SAAPREGGETSPCRRIPHGFGHT*HVVSFH
Trigger: ATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCC...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp TGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGACCTCCTGGCCGGCGTGAGAGCACCCCGTTCCTaGTGTAGTCCGTGGGCATCT +
Preference number: 4 (lower is better)
Translates to: CTILCPYWSPATDLLAGVRAPRS*CSPWAS
Trigger: AGATGCCCACGGACTACATCAGGAACGGGGTGCTCT...CACGCCGGCCAGGAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp CCCCTACAGGAGCCAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAATGCTTCACCCTAACATaGCGCTCGGGTTCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: PLQEPDPRLRAGSVPIRECFTLT*RSGSLR
Trigger: ACGGAGGGAACCCGAGCGTCATGTTAGGGTGAAGCA...TTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTGGCTCCTGTAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406902.6
CDS-3UTR GCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTGGGGGATTTCGTCGCTaGATTCGGTGTCCGAGGCAT +
Preference number: 4 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPGGFRR*IRCPRH
Trigger: ATGCCTCGGACACCGAATGCAGCGACGAAATCCCCC...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp CTCTGGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTACCTCCTGCACCTTCTaGTCCAGCTCCATCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LWRAGHKVARTSWGGWRGTSCTF*SSSIRR
Trigger: GCGGCGGATGGAGCTGGAGCAGAAGGTGCAGGAGGT...ACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTACACTTCGGGCACGATaGTCCACTGTATCCGCCACC +
Preference number: 4 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPTLRAR*STVSAT
Trigger: GGTGGCGGATACAGTGGAGCATCGTGCCCGAAGTGT...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp GAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTTTCTCTGCAGAGGCACCTGACGTaGCCTGTGGGAGAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: ERDTRLREPLGVAGEVSLQRHLT*PVGEGH
Trigger: GTGCCCCTCTCCCACAGGGCACGTCAGGTGCCTCTG...CAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCAGTGTGAGAAAGATGTaGTTTTACCTGCACCATCCT +
Preference number: 4 (lower is better)
Translates to: SAPADTQARGVATSFQEASVRKM*FYLHHP
Trigger: AGGATGGTGCAGGTAAAAGCACATCTTTCTCACACT...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CCCCTACAGGAGCCAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAACCAGACATGCCACAGTaGTCGGAGCACCTCCAACAG +
Preference number: 4 (lower is better)
Translates to: PLQEPDPRLRAGSVPIREPDMPQ*SEHLQQ
Trigger: CTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGG...TTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTGGCTCCTGTAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp GAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTTTCTCTGGTGCCCACCCTGTGTTaGCTCAGGCGCCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ERDTRLREPLGVAGEVSLVPTLC*LRRQGG
Trigger: CCCACCTTGGCGCCTGAGGCAACACAGGGTGGGCAC...CAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp AATGCCACAGGAGGGTCTCATGTAAGAGGAAGGAGGGCCGCCAGGCCCGTTTCTATTGTCTGCGGGCACTaGCTCTGCAGCCGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: NATGGSHVRGRRAARPVSIVCGH*LCSRPW
Trigger: CCAGGGGCGGCTGCAGAGGCAGTGCCCGCAGACAAT...AGAAACGGGCCTGGCGGCCCTCCTTCCTCTTACATGAGACCCTCCTGTGGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGGATTGTCTGCGGGCACTaGCTCTGCAGCCGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: HSSAMALVVDELLASGERIVCGH*LCSRPW
Trigger: CCAGGGGCGGCTGCAGAGGCAGTGCCCGCAGACAAT...CCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp AGGAAGGGCCCCGCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTGGGCCTGCCCTTTTaGGGGCTGCTGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: RKGPALFSYGFGGGRASGLGLPF*GLLSHL
Trigger: CAGATGGCTCAGCAGCCCCCAAAAGGGCAGGCCCAG...GCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCGGGGCCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGACGTCCAGCACCAGCTaGAACTTCTCAGACACAGTC +
Preference number: 4 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLTSSTS*NFSDTV
Trigger: GACTGTGTCTGAGAAGTTCCAGCTGGTGCTGGACGT...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp AGGCGCTCATTGGCCCCGAGGCCCCGGACCCATCCTTGGGCACTGCCGGGCCCTTTGAGGACCCAGATTTaGAGCTTTCGAAGCACAAGT +
Preference number: 4 (lower is better)
Translates to: RRSLAPRPRTHPWALPGPLRTQI*SFRSTS
Trigger: ACTTGTGCTTCGAAAGCTCCAAATCTGGGTCCTCAA...AGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGCCTCGGGGCCAATGAGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CTCTGGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTCCCTCTCTGTTCCCGTaGAGCGAGTGTGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LWRAGHKVARTSWGGWRGPSLFP*SECGAQ
Trigger: CTGCGCTCCACACTCGCTCCACGGGAACAGAGAGGG...ACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACTCGCGGATGTTCTCCTaGGCCTTCCAAAGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: SAAPREGGETSPCRRIPHSRMFS*AFQRAK
Trigger: CTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGA...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp AGGAAGGGCCCCGCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCAGGCAACCGCAGCCTaGGGGCCATGTGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: RKGPALFSYGFGGGRASGQATAA*GPCARH
Trigger: ATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTG...GCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCGGGGCCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGGAGCACCTCCAACAGCCTCCTCAGGCGCCAAGGTaGGGTTCACTGGGATATGTC +
Preference number: 4 (lower is better)
Translates to: PGGHVPDMPQCSEHLQQPPQAPR*GSLGYV
Trigger: GACATATCCCAGTGAACCCCACCTTGGCGCCTGAGG...AGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACGCCACACCTGGCACGTaGTCAGTTTTCATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SAAPREGGETSPCRRIPHATPGT*SVFISL
Trigger: AAGGGAGATGAAAACTGACCACGTGCCAGGTGTGGC...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAACCCAGGCAACCGCAGCCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGGGCTTCGGCCACACCTaGCACGTGGTCAGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: QPRQPQPGGHVPDMPQCSGFGHT*HVVSFH
Trigger: ATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCC...CGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAGTGCAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTTCGGCCACACCTaGCACGTGGTCAGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: QCRPRPLGSAHGCSLKHRGFGHT*HVVSFH
Trigger: ATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCC...CCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGGAATGTGGCCCTCCCTaGGGGCTTCGGCCACACCTG +
Preference number: 4 (lower is better)
Translates to: ALFSYGFGGGRASGLWRAECGPP*GLRPHL
Trigger: CAGGTGTGGCCGAAGCCCCCAGGGAGGGCCACATTC...CGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp GTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCCGTCTGCAGCCTGCGTaGGACTGCGGCGCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: VRKMCFYLHHPVPLLVPSRLQPA*DCGAGA
Trigger: CGCTCCAGCGCCGCAGTCTCACGCAGGCTGCAGACG...GCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR TCA 90 bp AATGCCACAGGAGGGTCTCATGTAAGAGGAAGGAGGGCCGCCAGGCCCGTTTCTGGCAATCCCCATGCCTaGGCCTGGGAGGACAGACAG +
Preference number: 4 (lower is better)
Translates to: NATGGSHVRGRRAARPVSGNPHA*AWEDRQ
Trigger: CTGTCTGTCCTCCCAGGCTCAGGCATGGGGATTGCC...AGAAACGGGCCTGGCGGCCCTCCTTCCTCTTACATGAGACCCTCCTGTGGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGGACCTCCTGCACCTTCTaGTCCAGCTCCATCCGCCGC +
Preference number: 4 (lower is better)
Translates to: HSSAMALVVDELLASGERTSCTF*SSSIRR
Trigger: GCGGCGGATGGAGCTGGAGCAGAAGGTGCAGGAGGT...CCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTGGCACCAAGGGCAAATaGCACAGGAGGGTCTCATGT +
Preference number: 4 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPGTKGK*HRRVSC
Trigger: ACATGAGACCCTCCTGTGGCATTTGCCCTTGGTGCC...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp GCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGGGTGAAACCAGCCCATaGCGCCGGATCCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: ALFSYGFGGGRASGLWRAGETSP*RRIPHP
Trigger: TGGGTGAGGGATCCGGCGGCATGGGCTGGTTTCACC...CGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAAGGAGCCCAGAGCCCGTaGCGATCCGCGCTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKGAQSP*RSALRS
Trigger: GGAGCGGAGCGCGGATCGGCACGGGCTCTGGGCTCC...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCCCTACAGGAGCCAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAATTCCCGAAAAGGTTCTaGGCTTTCTGGGCGACGTCC +
Preference number: 4 (lower is better)
Translates to: PLQEPDPRLRAGSVPIREFPKRF*AFWATS
Trigger: GGACGTCGCCCAGAAAGCCCAGAACCTTTTCGGGAA...TTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTGGCTCCTGTAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTGGAAATTGCCCTTCTTaGTGCTGTGGAAGCGACCGG +
Preference number: 4 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPGNCPS*CCGSDR
Trigger: CCGGTCGCTTCCACAGCACCAAGAAGGGCAATTTCC...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp CCTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAAGGACCTTGTACTTCTaGATGTCCGTGATGTCCACT +
Preference number: 4 (lower is better)
Translates to: PPPVCGWPSEAPDVPCGRRTLYF*MSVMST
Trigger: AGTGGACATCACGGACATCCAGAAGTACAAGGTCCT...TCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGACCTCCTGGCCGGCGTGATCCTGTGCCCTTACTaGTCCCCAGCTACAGACCTC +
Preference number: 4 (lower is better)
Translates to: CTILCPYWSPATDLLAGVILCPY*SPATDL
Trigger: GAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGAT...CACGCCGGCCAGGAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGCAGGCAACCGCAGCCTaGGGGCCATGTGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: ALFSYGFGGGRASGLWRAQATAA*GPCARH
Trigger: ATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTG...CGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAACCCCGGACCCATCCTTaGGCACTGCCGGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKPRTHP*ALPGPG
Trigger: CCCAGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGG...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAAGGCCGCCGTGTGGCCACACCTGGCACGTaGTCAGTTTTCATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: QTHGSERVLSPFGKGRRVATPGT*SVFISL
Trigger: AAGGGAGATGAAAACTGACCACGTGCCAGGTGTGGC...CACACGGCGGCCTTTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CAA 72 bp CCTCTGGAGAGCGGGACACAAGGTTGCGAGAACCTCTaGGGGTGGCTGGAGAGGTTTCTCTGTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLESGTQGCENL*GWLERFLCPGW
Trigger: CCAGCCTGGACAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp AGGAAGGGCCCCGCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCTTTCTCGGTGGTTGGTaGAAGGCCCCCATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: RKGPALFSYGFGGGRASGFLGGW*KAPMSL
Trigger: GAGGGACATGGGGGCCTTTCACCAACCACCGAGAAA...GCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCGGGGCCCTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCTTACAGACGCGGTGCTaGGCGCCCTGGAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFLQTRC*APWRPA
Trigger: TGCTGGCCTCCAGGGCGCTCAGCACCGCGTCTGTAA...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGAGATCTCGTGGAAATTaGCCTTCTTGGTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLRSRGN*PSWCCG
Trigger: TCCACAGCACCAAGAAGGGCAATTTCCACGAGATCT...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp CTCTGGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTAGCGGGACACAAGGTTaGGAGAACCTCTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LWRAGHKVARTSWGGWRGSGTQG*ENLLGW
Trigger: CCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCT...ACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGCATGATGAGGGTCCCTaGACCAGCAGGGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ALFSYGFGGGRASGLWRAHDEGP*TSRVPQ
Trigger: CTGAGGGACCCTGCTGGTCCAGGGACCCTCATCATG...CGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp TGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGACCTCCTGGCCGGCGTGGTCCGGTTAAAGTCCTaGACTCCTGTGGCCATGATG +
Preference number: 4 (lower is better)
Translates to: CTILCPYWSPATDLLAGVVRLKS*TPVAMM
Trigger: CATCATGGCCACAGGAGTCCAGGACTTTAACCGGAC...CACGCCGGCCAGGAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp CCCCTACAGGAGCCAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAATAAGAACAATGGGATaGCCCAGCCATGCCACACGG +
Preference number: 4 (lower is better)
Translates to: PLQEPDPRLRAGSVPIREIRTMG*PSHATR
Trigger: CCGTGTGGCATGGCTGGGCCATCCCATTGTTCTTAT...TTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTGGCTCCTGTAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp GAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTTTCTCTGAGGTTCTGGGCTTTCTaGGCGACGTCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: ERDTRLREPLGVAGEVSLRFWAF*ATSSTS
Trigger: GCTGGTGCTGGACGTCGCCCAGAAAGCCCAGAACCT...CAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp GAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTTTCTCTGCGGTTTCTGGGTGGATaGCGTCGACACGGCAATCCC +
Preference number: 4 (lower is better)
Translates to: ERDTRLREPLGVAGEVSLRFLGG*RRHGNP
Trigger: GGGATTGCCGTGTCGACGCCATCCACCCAGAAACCG...CAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGGAGCACCTCCAACAGCCTTCGCGGATGTTCTCCTaGGCCTTCCAAAGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: PGGHVPDMPQCSEHLQQPSRMFS*AFQRAK
Trigger: CTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGA...AGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTTCGCGGATGTTCTCCTaGGCCTTCCAAAGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPSRMFS*AFQRAK
Trigger: CTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGA...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGGCCCTCCCGCTGTGTTTaGGGACTGAATCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: HSSAMALVVDELLASGERPSRCV*GLNPST
Trigger: GGTGCTGGGATTCAGTCCCCAAACACAGCGGGAGGG...CCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CAA 72 bp GACGAGCTTCTGGCCTCTGGAGAGCGGGACACAAGGTaGCGAGAACCTCTTGGGGTGGCTGGAGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: DELLASGERDTR*REPLGVAGEVS
Trigger: AGAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAGGCCAGAAGCTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
3UTR CAA 72 bp TTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTaGACGACATCTTTCTGTCCCCAGGAGGAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: FSVVGERPPCPS*TTSFCPQEEGP
Trigger: GGGCCCTTCCTCCTGGGGACAGAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTCATTCATGTACACGGTaGAGGCAATGGCAGACGTGT +
Preference number: 4 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPHSCTR*RQWQTC
Trigger: ACACGTCTGCCATTGCCTTCACCGTGTACATGAATG...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR TCA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCGGCAATCCCCATGCCTaGGCCTGGGAGGACAGACAG +
Preference number: 4 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFGNPHA*AWEDRQ
Trigger: CTGTCTGTCCTCCCAGGCTCAGGCATGGGGATTGCC...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp GAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTTTCTCTGTTTCTCGGTGGTTGGTaGAAGGCCCCCATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: ERDTRLREPLGVAGEVSLFLGGW*KAPMSL
Trigger: GAGGGACATGGGGGCCTTTCACCAACCACCGAGAAA...CAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp GGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGCCAGAGCCTCTCGGATGGCCCAGATGTGCTTTTACCTaGACCATCCTGTGCCCTTAC +
Preference number: 4 (lower is better)
Translates to: GSRLLPKAQGLPEPLGWPRCAFT*TILCPY
Trigger: GTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCT...GGGCCATCCGAGAGGCTCTGGCAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCGGCTCGGCTCACGGTTaGTCCCTAAAGCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFGSAHG*SLKHRG
Trigger: GCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCC...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp GTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCCCAGCAGACCAGGCCTaGGGGCGCTCCCTCCACAAA +
Preference number: 4 (lower is better)
Translates to: VRKMCFYLHHPVPLLVPSPADQA*GRSLHK
Trigger: TTTGTGGAGGGAGCGCCCGCAGGCCTGGTCTGCTGG...GCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAACCCATCCTTGGGCACTaGCGGGCCCTGGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKPILGH*RALGRE
Trigger: CTCTCTCCCCAGGGCCCGGCAGTGCCCAAGGATGGG...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCCAGAAATTAAACATCTaGCCAGATGTACACAATTTG +
Preference number: 4 (lower is better)
Translates to: SAPADTQARGVATSFQEAQKLNI*PDVHNL
Trigger: CAAATTGTGTACATCTGGGCAGATGTTTAATTTCTG...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGACGCGGTGCTGAGAGATTGAAGATCTCGTaGAAATTGCCCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: AGVSGREQQAGPYRRGAERLKIS*KLPFLV
Trigger: CACCAAGAAGGGCAATTTCCACGAGATCTTCAATCT...CTCAGCACCGCGTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp CTCTGGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTGCCCTGGCCCCTTCTTaGTCGATAAAACGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LWRAGHKVARTSWGGWRGALAPS*SIKRRG
Trigger: ACCTCTGCGTTTTATCGACCAAGAAGGGGCCAGGGC...ACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGGCGAGCTTCTGGCCTCTaGAGAGCGGGACACAAGGTT +
Preference number: 4 (lower is better)
Translates to: HSSAMALVVDELLASGERRASGL*RAGHKV
Trigger: AACCTTGTGTCCCGCTCTCCAGAGGCCAGAAGCTCG...CCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGTTTCCAGGTGACCTTTaGTCTCATTCAGTCGATCAA +
Preference number: 4 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLFPGDL*SHSVDQ
Trigger: TTGATCGACTGAATGAGATCAAAGGTCACCTGGAAA...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR TCA 90 bp GTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCGGGTACGTAGCTCCGTaGCGAGGTCGTCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VRKMCFYLHHPVPLLVPSGYVAP*RGRLQP
Trigger: AGGCTGCAGACGACCTCGTCACGGAGCTACGTACCC...GCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAATCGCGGTCCAGCTCCTaGCGCAGCATCTCCGCGTTG +
Preference number: 4 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKSRSSS*RSISAL
Trigger: CAACGCGGAGATGCTGCGGCAGGAGCTGGACCGCGA...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp CAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCACCCAGGCCGGCCGGTaGGCTGGGTACGTAGCTCCG +
Preference number: 4 (lower is better)
Translates to: QSVRKMCFYLHHPVPLLVTQAGR*AGYVAP
Trigger: CGGAGCTACGTACCCAGCGCACCGGCCGGCCTGGGT...GACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp CCCCTACAGGAGCCAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAAGATCTCGTGGAAATTaGCCTTCTTGGTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: PLQEPDPRLRAGSVPIRERSRGN*PSWCCG
Trigger: TCCACAGCACCAAGAAGGGCAATTTCCACGAGATCT...TTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTGGCTCCTGTAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAACTGTCGCATGTCGGCTaGAGGCAGTGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKLSHVG*RQCRPR
Trigger: CCTGGGCCTGCACTGCCTGCAGCCGACATGCGACAG...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp AAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGAATTGTCTGCGGGCACTaGCTCTGCAGCCGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: KMCFYLHHPVPLLVPSYRIVCGH*LCSRPW
Trigger: CCAGGGGCGGCTGCAGAGGCAGTGCCCGCAGACAAT...TCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGCAGAAATTAAACATCTaGCCAGATGTACACAATTTG +
Preference number: 4 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVQKLNI*PDVHNL
Trigger: CAAATTGTGTACATCTGGGCAGATGTTTAATTTCTG...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAAGGCCGCCGTGTGTTGAGGACCCAGATTTaGAGCTTTCGAAGCACAAGT +
Preference number: 4 (lower is better)
Translates to: QTHGSERVLSPFGKGRRVLRTQI*SFRSTS
Trigger: ACTTGTGCTTCGAAAGCTCCAAATCTGGGTCCTCAA...CACACGGCGGCCTTTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGGCCCTGGCCCCTTCTTaGTCGATAAAACGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: ALFSYGFGGGRASGLWRAALAPS*SIKRRG
Trigger: ACCTCTGCGTTTTATCGACCAAGAAGGGGCCAGGGC...CGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGGACCTCTTGGGGTGGCTaGAGAGGTTTCTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: HSSAMALVVDELLASGERTSWGG*RGFSVQ
Trigger: CTGGACAGAGAAACCTCTCCAGCCACCCCAAGAGGT...CCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGCTATGGCTTTGGTGGTaGACGAGCTTCTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ALFSYGFGGGRASGLWRALWLWW*TSFWPL
Trigger: CAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAG...CGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp AAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGAAGGGCAGGCGAGGGGTaGGCCCTTCTCACCCTCTCT +
Preference number: 4 (lower is better)
Translates to: KMCFYLHHPVPLLVPSYRRAGEG*ALLTLS
Trigger: AGAGAGGGTGAGAAGGGCCCACCCCTCGCCTGCCCT...TCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAAGAATGTGGCCCTCCCTaGGGGCTTCGGCCACACCTG +
Preference number: 4 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKECGPP*GLRPHL
Trigger: CAGGTGTGGCCGAAGCCCCCAGGGAGGGCCACATTC...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp GAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTTTCTCTGGGAGACTCCTCCAGATaGTATAGGGCGTGTCGTACT +
Preference number: 4 (lower is better)
Translates to: ERDTRLREPLGVAGEVSLGDSSR*YRACRT
Trigger: AGTACGACACGCCCTATATCATCTGGAGGAGTCTCC...CAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR TCA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACTATTGCAAAAGCTCATaGGGATGTCCAATTGTTTCC +
Preference number: 4 (lower is better)
Translates to: SAAPREGGETSPCRRIPHYCKSS*GCPIVS
Trigger: GGAAACAATTGGACATCCTCATGAGCTTTTGCAATA...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp CAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCGCCCTCAGAGGCACCTaGCGTGCCCTGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QSVRKMCFYLHHPVPLLVALRGT*RALWER
Trigger: CCTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGC...GACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp AGAGCAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTACCCAGGCCGGCCGGTaGGCTGGGTACGTAGCTCCG +
Preference number: 4 (lower is better)
Translates to: RAKCEKDVLLPAPSCALTTQAGR*AGYVAP
Trigger: CGGAGCTACGTACCCAGCGCACCGGCCGGCCTGGGT...AGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp GAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTTTCTCTGGAGAACCTCTTGGGGTaGCTGGAGAGGTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ERDTRLREPLGVAGEVSLENLLG*LERFLC
Trigger: ACAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTC...CAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp AATGCCACAGGAGGGTCTCATGTAAGAGGAAGGAGGGCCGCCAGGCCCGTTTCTCTTCAGCTATGGCTTTaGTGGTGGACGAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: NATGGSHVRGRRAARPVSLQLWL*WWTSFW
Trigger: CCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAG...AGAAACGGGCCTGGCGGCCCTCCTTCCTCTTACATGAGACCCTCCTGTGGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp AGAGCAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTAGCCGCCCCTGGGGGTaGGTCAGTGCCCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: RAKCEKDVLLPAPSCALTSRPWG*VSAHPV
Trigger: CACAGGGTGGGCACTGACCCACCCCCAGGGGCGGCT...AGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTTTCTCTGAACACTCTTTCACTGTaGCTCCTTCAGGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: ERDTRLREPLGVAGEVSLNTLSL*LLQVLA
Trigger: GGCCAGGACCTGAAGGAGCCACAGTGAAAGAGTGTT...CAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406902.6
CDS-3UTR TCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTTTTCCAGGTGACCTTTaGTCTCATTCAGTCGATCAA +
Preference number: 4 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPFPGDL*SHSVDQ
Trigger: TTGATCGACTGAATGAGATCAAAGGTCACCTGGAAA...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR TCA 90 bp GTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCCCCCATGTCCCTCCTTaGCGACATCTTTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: VRKMCFYLHHPVPLLVPSPHVPP*RHLSVP
Trigger: GGGGACAGAAAGATGTCGTCAAGGAGGGACATGGGG...GCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGGAGCGCTCCTTGAGCTaGGGGTCGGTGGGGAGACTC +
Preference number: 4 (lower is better)
Translates to: WSVFISLSPQKGLELNHPERSLS*GSVGRL
Trigger: GAGTCTCCCCACCGACCCGCAGCTCAAGGAGCGCTC...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGCAGAGGCACCTGACGTaGCCTGTGGGAGAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: WSVFISLSPQKGLELNHPQRHLT*PVGEGH
Trigger: GTGCCCCTCTCCCACAGGGCACGTCAGGTGCCTCTG...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CTCTGGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTAGATGTGCTTTTACCTaGACCATCCTGTGCCCTTAC +
Preference number: 4 (lower is better)
Translates to: LWRAGHKVARTSWGGWRGRCAFT*TILCPY
Trigger: GTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCT...ACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAAGCCATGTGCCAGACATaGCACAGTGCTCGGAGCACC +
Preference number: 4 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKAMCQT*HSARST
Trigger: GGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGC...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCGTCCCCCTCCCCTGGTaGACCAAGAGAGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: QSVRKMCFYLHHPVPLLVVPLPW*TKRASP
Trigger: GGGACTGGCTCTCTTGGTGCACCAGGGGAGGGGGAC...GACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGGAGCACCTCCAACAGCCTAGATTGAAGATCTCGTaGAAATTGCCCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PGGHVPDMPQCSEHLQQPRLKIS*KLPFLV
Trigger: CACCAAGAAGGGCAATTTCCACGAGATCTTCAATCT...AGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAACGAGCGGTTTCTGGGTaGATGGCGTCGACACGGCAA +
Preference number: 4 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKRAVSG*MASTRQ
Trigger: TTGCCGTGTCGACGCCATCCACCCAGAAACCGCTCG...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCCATCCCTGTGCACCATaGCACCAAACACGAGCGGTT +
Preference number: 4 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFHPCAP*HQTRAV
Trigger: AACCGCTCGTGTTTGGTGCCATGGTGCACAGGGATG...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCACCTCTTGGGGTGGCTaGAGAGGTTTCTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFTSWGG*RGFSVQ
Trigger: CTGGACAGAGAAACCTCTCCAGCCACCCCAAGAGGT...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCGTTGCGAGAACCTCTTaGGGTGGCTGGAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFVARTS*GGWRGF
Trigger: GAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAAC...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCCGAGCTTCTGGCCTCTaGAGAGCGGGACACAAGGTT +
Preference number: 4 (lower is better)
Translates to: VRKMCFYLHHPVPLLVPSRASGL*RAGHKV
Trigger: AACCTTGTGTCCCGCTCTCCAGAGGCCAGAAGCTCG...GCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp AAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGATGGTGGACGAGCTTCTaGCCTCTGGAGAGCGGGACA +
Preference number: 4 (lower is better)
Translates to: KMCFYLHHPVPLLVPSYRWWTSF*PLESGT
Trigger: TGTCCCGCTCTCCAGAGGCCAGAAGCTCGTCCACCA...TCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGAGGGCAGGCGAGGGGTaGGCCCTTCTCACCCTCTCT +
Preference number: 4 (lower is better)
Translates to: WSVFISLSPQKGLELNHPRAGEG*ALLTLS
Trigger: AGAGAGGGTGAGAAGGGCCCACCCCTCGCCTGCCCT...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGCAGGCACGGAGAGGGTaGTGTCTGCTGCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WSVFISLSPQKGLELNHPQARRG*CLLPWS
Trigger: GCTCCAGGGCAGCAGACACCACCCTCTCCGTGCCTG...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406902.6
CDS-3UTR TCA 90 bp GTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCCATACAGCTTCTGTGTaGTCTCCGGCTGGACCCACA +
Preference number: 4 (lower is better)
Translates to: VRKMCFYLHHPVPLLVPSHTASV*SPAGPT
Trigger: TGTGGGTCCAGCCGGAGATCACACAGAAGCTGTATG...GCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR TCA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCGGAGACTCCTCCAGATaGTATAGGGCGTGTCGTACT +
Preference number: 4 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFGDSSR*YRACRT
Trigger: AGTACGACACGCCCTATATCATCTGGAGGAGTCTCC...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR TCA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTTATTGCAAAAGCTCATaGGGATGTCCAATTGTTTCC +
Preference number: 4 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPYCKSS*GCPIVS
Trigger: GGAAACAATTGGACATCCTCATGAGCTTTTGCAATA...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp GTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCAATTGCCCTTCTTGGTaGTGTGGAAGCGACCGGCGT +
Preference number: 4 (lower is better)
Translates to: VRKMCFYLHHPVPLLVPSNCPSW*CGSDRR
Trigger: ACGCCGGTCGCTTCCACAGCACCAAGAAGGGCAATT...GCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp CAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCGGTGAAACCAGCCCATaGCGCCGGATCCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: QSVRKMCFYLHHPVPLLVGETSP*RRIPHP
Trigger: TGGGTGAGGGATCCGGCGGCATGGGCTGGTTTCACC...GACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGGAGGGTGGTGTCTGCTaGCCTGGAGCCTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: WSVFISLSPQKGLELNHPEGGVC*PGAWRT
Trigger: AGTCCTCCAGGCTCCAGGGCAGCAGACACCACCCTC...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406902.6
CDS-3UTR CCA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCATAAGAACAATGGGATaGCCCAGCCATGCCACACGG +
Preference number: 4 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFIRTMG*PSHATR
Trigger: CCGTGTGGCATGGCTGGGCCATCCCATTGTTCTTAT...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp AAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGAAACACGAGCGGTTTCTaGGTGGATGGCGTCGACACG +
Preference number: 4 (lower is better)
Translates to: KMCFYLHHPVPLLVPSYRNTSGF*VDGVDT
Trigger: CGTGTCGACGCCATCCACCCAGAAACCGCTCGTGTT...TCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp GTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCGTTGCGAGAACCTCTTaGGGTGGCTGGAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: VRKMCFYLHHPVPLLVPSVARTS*GGWRGF
Trigger: GAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAAC...GCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCTCTCTGTTCCCGTaGAGCGAGTGTGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: QSVRKMCFYLHHPVPLLVPSLFP*SECGAQ
Trigger: CTGCGCTCCACACTCGCTCCACGGGAACAGAGAGGG...GACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAATATGTCCCCCTCCCCTaGTGCACCAAGAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKYVPLP*CTKRAS
Trigger: ACTGGCTCTCTTGGTGCACCAGGGGAGGGGGACATA...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp AGGAAGGGCCCCGCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCAAGTCATCTCTCTTGTaGCCTCTGAACCTGATTTTG +
Preference number: 4 (lower is better)
Translates to: RKGPALFSYGFGGGRASGKSSLL*PLNLIL
Trigger: CAAAATCAGGTTCAGAGGTCACAAGAGAGATGACTT...GCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCGGGGCCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR TCA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAACATACAGCTTCTGTGTaGTCTCCGGCTGGACCCACA +
Preference number: 4 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKHTASV*SPAGPT
Trigger: TGTGGGTCCAGCCGGAGATCACACAGAAGCTGTATG...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR TCA 90 bp AGGAAGGGCCCCGCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCGTTTTCTGTCAGATTaGAGATCTCGTGGAAATTGC +
Preference number: 4 (lower is better)
Translates to: RKGPALFSYGFGGGRASGRFLSD*RSRGNC
Trigger: GCAATTTCCACGAGATCTTCAATCTGACAGAAAACG...GCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCGGGGCCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGGCCTTCAGCACCTCCTaGACCTTCTGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WSVFISLSPQKGLELNHPAFSTS*TFCSSS
Trigger: GGAGCTGGAGCAGAAGGTGCAGGAGGTGCTGAAGGC...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR GCA 90 bp AGAGCAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTGAAACCAGCCCATaGCGCCGGATCCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: RAKCEKDVLLPAPSCALTGETSP*RRIPHP
Trigger: TGGGTGAGGGATCCGGCGGCATGGGCTGGTTTCACC...AGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp AGAGCAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTCTGGGGGTGGGTCAGTaGCCACCCTGTGTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: RAKCEKDVLLPAPSCALTLGVGQ*PPCVAS
Trigger: TGAGGCAACACAGGGTGGGCACTGACCCACCCCCAG...AGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGGCTCTGCTCCATTGCTaGCCTGGGCCTGCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: WSVFISLSPQKGLELNHPALLHC*PGPALL
Trigger: CAAAAGGGCAGGCCCAGGCCAGCAATGGAGCAGAGC...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp CACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGGGTGATCTTGATGTACTaGCTGAGAATGGTCTCGAAG +
Preference number: 4 (lower is better)
Translates to: HSSAMALVVDELLASGERVILMY*LRMVSK
Trigger: CTTCGAGACCATTCTCAGCCAGTACATCAAGATCAC...CCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp AAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGACAGCTATGGCTTTGGTaGTGGACGAGCTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KMCFYLHHPVPLLVPSYRQLWLW*WTSFWP
Trigger: AGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTG...TCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAACAGCTATGGCTTTGGTaGTGGACGAGCTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKQLWLW*WTSFWP
Trigger: AGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTG...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAACGCACTCTTCAGCTATaGCTTTGGTGGTGGACGAGC +
Preference number: 4 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKRTLQL*LWWWTS
Trigger: GCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCG...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGTGGTGTCTGCTGCCCTaGAGCCTGGAGGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: WSVFISLSPQKGLELNHPWCLLP*SLEDSS
Trigger: ACTGGAGTCCTCCAGGCTCCAGGGCAGCAGACACCA...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406902.6
CDS-3UTR CCA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGGGCTCCTTCAGGTCCTaGCCCAGAACCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: WSVFISLSPQKGLELNHPGSFRS*PRTRMC
Trigger: GCACATCCTGGTTCTGGGCCAGGACCTGAAGGAGCC...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406902.6
CDS-3UTR TCA 90 bp AATGCCACAGGAGGGTCTCATGTAAGAGGAAGGAGGGCCGCCAGGCCCGTTTCTAAGTCATCTCTCTTGTaGCCTCTGAACCTGATTTTG +
Preference number: 4 (lower is better)
Translates to: NATGGSHVRGRRAARPVSKSSLL*PLNLIL
Trigger: CAAAATCAGGTTCAGAGGTCACAAGAGAGATGACTT...AGAAACGGGCCTGGCGGCCCTCCTTCCTCTTACATGAGACCCTCCTGTGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR TCA 90 bp AAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGAACAAGTAATTCTCCGTaGCGTAGAGCACCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: KMCFYLHHPVPLLVPSYRTSNSP*RRAPRS
Trigger: GGAACGGGGTGCTCTACGTCACGGAGAATTACTTGT...TCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp AGAGCAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGCCATGTGCCAGACATaGCACAGTGCTCGGAGCACC +
Preference number: 4 (lower is better)
Translates to: RAKCEKDVLLPAPSCALTAMCQT*HSARST
Trigger: GGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGC...AGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGAACACGAGCGGTTTCTaGGTGGATGGCGTCGACACG +
Preference number: 4 (lower is better)
Translates to: WSVFISLSPQKGLELNHPNTSGF*VDGVDT
Trigger: CGTGTCGACGCCATCCACCCAGAAACCGCTCGTGTT...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp AGAGCAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTCCAGACATGCCACAGTaGTCGGAGCACCTCCAACAG +
Preference number: 4 (lower is better)
Translates to: RAKCEKDVLLPAPSCALTPDMPQ*SEHLQQ
Trigger: CTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGG...AGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCGCACTCTTCAGCTATaGCTTTGGTGGTGGACGAGC +
Preference number: 4 (lower is better)
Translates to: QSVRKMCFYLHHPVPLLVRTLQL*LWWWTS
Trigger: GCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCG...GACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp AGAGCAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTTATGTCCCCCTCCCCTaGTGCACCAAGAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: RAKCEKDVLLPAPSCALTYVPLP*CTKRAS
Trigger: ACTGGCTCTCTTGGTGCACCAGGGGAGGGGGACATA...AGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp AGAGCAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGCAGCATCTCCGCGTTaGTTTCTTCTCGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: RAKCEKDVLLPAPSCALTAASPR*FLLAAS
Trigger: GGAAGCTGCGAGAAGAAACCAACGCGGAGATGCTGC...AGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CCA 90 bp GTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCGTGATCTTGATGTACTaGCTGAGAATGGTCTCGAAG +
Preference number: 4 (lower is better)
Translates to: VRKMCFYLHHPVPLLVPSVILMY*LRMVSK
Trigger: CTTCGAGACCATTCTCAGCCAGTACATCAAGATCAC...GCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCTTCAGCTATGGCTTTaGTGGTGGACGAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: QSVRKMCFYLHHPVPLLVLQLWL*WWTSFW
Trigger: CCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAG...GACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp AGAGCAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTACAAGTAATTCTCCGTaGCGTAGAGCACCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: RAKCEKDVLLPAPSCALTTSNSP*RRAPRS
Trigger: GGAACGGGGTGCTCTACGTCACGGAGAATTACTTGT...AGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp AGAATTATTGCAAAAGCTCATGAGGATGTCCAATTGTTTCCACTACCAAATCGTGTGCCCACCCTGTGTTaGCTCAGGCGCCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RIIAKAHEDVQLFPLPNRVPTLC*LRRQGG
Trigger: CCCACCTTGGCGCCTGAGGCAACACAGGGTGGGCAC...ACGATTTGGTAGTGGAAACAATTGGACATCCTCATGAGCTTTTGCAATAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp AATGCCACAGGAGGGTCTCATGTAAGAGGAAGGAGGGCCGCCAGGCCCGTTTCTCAGAAATTAAACATCTaGCCAGATGTACACAATTTG +
Preference number: 4 (lower is better)
Translates to: NATGGSHVRGRRAARPVSQKLNI*PDVHNL
Trigger: CAAATTGTGTACATCTGGGCAGATGTTTAATTTCTG...AGAAACGGGCCTGGCGGCCCTCCTTCCTCTTACATGAGACCCTCCTGTGGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAAGTGATCTTGATGTACTaGCTGAGAATGGTCTCGAAG +
Preference number: 4 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKVILMY*LRMVSK
Trigger: CTTCGAGACCATTCTCAGCCAGTACATCAAGATCAC...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp AGAATTATTGCAAAAGCTCATGAGGATGTCCAATTGTTTCCACTACCAAATCGTCAGCTACAGACCTCCTaGCCGGCGTGTCAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: RIIAKAHEDVQLFPLPNRQLQTS*PACQAE
Trigger: CTCGGCCTGACACGCCGGCCAGGAGGTCTGTAGCTG...ACGATTTGGTAGTGGAAACAATTGGACATCCTCATGAGCTTTTGCAATAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR TCA 90 bp AAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGACGTTTTCTGTCAGATTaGAGATCTCGTGGAAATTGC +
Preference number: 4 (lower is better)
Translates to: KMCFYLHHPVPLLVPSYRRFLSD*RSRGNC
Trigger: GCAATTTCCACGAGATCTTCAATCTGACAGAAAACG...TCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR TCA 90 bp AGAATTATTGCAAAAGCTCATGAGGATGTCCAATTGTTTCCACTACCAAATCGTGGCAATCCCCATGCCTaGGCCTGGGAGGACAGACAG +
Preference number: 4 (lower is better)
Translates to: RIIAKAHEDVQLFPLPNRGNPHA*AWEDRQ
Trigger: CTGTCTGTCCTCCCAGGCTCAGGCATGGGGATTGCC...ACGATTTGGTAGTGGAAACAATTGGACATCCTCATGAGCTTTTGCAATAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAAAGTGTGAGAAAGATGTaGTTTTACCTGCACCATCCT +
Preference number: 4 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKSVRKM*FYLHHP
Trigger: AGGATGGTGCAGGTAAAAGCACATCTTTCTCACACT...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGAGGACCTTGTACTTCTaGATGTCCGTGATGTCCACT +
Preference number: 4 (lower is better)
Translates to: WSVFISLSPQKGLELNHPRTLYF*MSVMST
Trigger: AGTGGACATCACGGACATCCAGAAGTACAAGGTCCT...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp AGAATTATTGCAAAAGCTCATGAGGATGTCCAATTGTTTCCACTACCAAATCGTGCCATGTGCCAGACATaGCACAGTGCTCGGAGCACC +
Preference number: 4 (lower is better)
Translates to: RIIAKAHEDVQLFPLPNRAMCQT*HSARST
Trigger: GGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGC...ACGATTTGGTAGTGGAAACAATTGGACATCCTCATGAGCTTTTGCAATAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp AGAATTATTGCAAAAGCTCATGAGGATGTCCAATTGTTTCCACTACCAAATCGTCCCTCCCGCTGTGTTTaGGGACTGAATCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: RIIAKAHEDVQLFPLPNRPSRCV*GLNPST
Trigger: GGTGCTGGGATTCAGTCCCCAAACACAGCGGGAGGG...ACGATTTGGTAGTGGAAACAATTGGACATCCTCATGAGCTTTTGCAATAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR GCA 90 bp AGAGCAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTAGTGTGAGAAAGATGTaGTTTTACCTGCACCATCCT +
Preference number: 4 (lower is better)
Translates to: RAKCEKDVLLPAPSCALTSVRKM*FYLHHP
Trigger: AGGATGGTGCAGGTAAAAGCACATCTTTCTCACACT...AGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp AGAATTATTGCAAAAGCTCATGAGGATGTCCAATTGTTTCCACTACCAAATCGTGAGAACCTCTTGGGGTaGCTGGAGAGGTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RIIAKAHEDVQLFPLPNRENLLG*LERFLC
Trigger: ACAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTC...ACGATTTGGTAGTGGAAACAATTGGACATCCTCATGAGCTTTTGCAATAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CCA 90 bp AGAATTATTGCAAAAGCTCATGAGGATGTCCAATTGTTTCCACTACCAAATCGTTTGAGGACCCAGATTTaGAGCTTTCGAAGCACAAGT +
Preference number: 4 (lower is better)
Translates to: RIIAKAHEDVQLFPLPNRLRTQI*SFRSTS
Trigger: ACTTGTGCTTCGAAAGCTCCAAATCTGGGTCCTCAA...ACGATTTGGTAGTGGAAACAATTGGACATCCTCATGAGCTTTTGCAATAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGGCCCCGGACCCATCCTaGGGCACTGCCGGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVAPDPS*GTAGPW
Trigger: CCAGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGC...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAGGCCCCGGACCCATCCTaGGGCACTGCCGGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LPQSAGGPQRHLTCPVGEAPDPS*GTAGPW
Trigger: CCAGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGC...CTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAGCGGCGCTCTGCTCCATaGCTGGCCTGGGCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: LPQSAGGPQRHLTCPVGERRSAP*LAWACP
Trigger: AGGGCAGGCCCAGGCCAGCAATGGAGCAGAGCGCCG...CTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp TCCGCCCCAGCAGACACGCAGGCCCGCGGGGTGGCCACCTCCTTCCAGGAGGCCAAGTTAGTGACCGGCTaGGCACCGCGCTTGAGCCGT +
Preference number: 5 (lower is better)
Translates to: SAPADTQARGVATSFQEAKLVTG*APRLSR
Trigger: ACGGCTCAAGCGCGGTGCCAAGCCGGTCACTAACTT...GGCCTCCTGGAAGGAGGTGGCCACCCCGCGGGCCTGCGTGTCTGCTGGGGCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp AGGCGCTCATTGGCCCCGAGGCCCCGGACCCATCCTTGGGCACTGCCGGGCCCTCCCCTCCCGCTGTGTTaGGGGACTGAATCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: RRSLAPRPRTHPWALPGPPLPLC*GTESQH
Trigger: GTGCTGGGATTCAGTCCCCAAACACAGCGGGAGGGG...AGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGCCTCGGGGCCAATGAGCGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp GCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGACGCGGTGCTGAGCCTGGGCCTGCCCTTTaGGGGGCTGCTGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: AGVSGREQQAGPYRRGAEPGPAL*GAAEPS
Trigger: AGATGGCTCAGCAGCCCCCAAAAGGGCAGGCCCAGG...CTCAGCACCGCGTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp AGGCGCTCATTGGCCCCGAGGCCCCGGACCCATCCTTGGGCACTGCCGGGCCCTCAGTCAGGTCTTCCTTaGGAGGTTCCACGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: RRSLAPRPRTHPWALPGPQSGLP*EVPRAQ
Trigger: CTGAGCCCGTGGAACCTCCAAAGGAAGACCTGACTG...AGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGCCTCGGGGCCAATGAGCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp AGGCGCTCATTGGCCCCGAGGCCCCGGACCCATCCTTGGGCACTGCCGGGCCCTGGTTGCGAGAACCTCTaGGGGTGGCTGGAGAGGTTT +
Preference number: 5 (lower is better)
Translates to: RRSLAPRPRTHPWALPGPGCENL*GWLERF
Trigger: AAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACC...AGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGCCTCGGGGCCAATGAGCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp TGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGACCTCCTGGCCGGCGTGAGGAAGAGGCGCTCATaGGCCCCGAGGCCCCGGACC +
Preference number: 5 (lower is better)
Translates to: CTILCPYWSPATDLLAGVRKRRS*APRPRT
Trigger: GGTCCGGGGCCTCGGGGCCAATGAGCGCCTCTTCCT...CACGCCGGCCAGGAGGTCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTAGGAAGAGGCGCTCATaGGCCCCGAGGCCCCGGACC +
Preference number: 5 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPRKRRS*APRPRT
Trigger: GGTCCGGGGCCTCGGGGCCAATGAGCGCCTCTTCCT...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGGGCTTGGCACCGCGCTaGAGCCGTCTCATATTTTCA +
Preference number: 5 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVGLAPR*SRLIFS
Trigger: TGAAAATATGAGACGGCTCAAGCGCGGTGCCAAGCC...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp CTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAGCCCGTTTCTCGGTGGTaGGTGAAAGGCCCCCATGTC +
Preference number: 5 (lower is better)
Translates to: LPQSAGGPQRHLTCPVGEPVSRW*VKGPHV
Trigger: GACATGGGGGCCTTTCACCAACCACCGAGAAACGGG...CTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp GGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGCCAGAGCCTCTCGGATGGCCCGGGCTCGGCTCACGGTaGCTCCCTAAAGCACAGGGG +
Preference number: 5 (lower is better)
Translates to: GSRLLPKAQGLPEPLGWPGLGSR*LPKAQG
Trigger: CCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCC...GGGCCATCCGAGAGGCTCTGGCAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CCTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAAGAGAGGTGTGGCCATaGTCTGCGGGCACTGCCTCT +
Preference number: 5 (lower is better)
Translates to: PPPVCGWPSEAPDVPCGRREVWP*SAGTAS
Trigger: AGAGGCAGTGCCCGCAGACAATGGCCACACCTCTCT...TCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp AATGCCACAGGAGGGTCTCATGTAAGAGGAAGGAGGGCCGCCAGGCCCGTTTCTGCCCCGGACCCATCCTaGGGCACTGCCGGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: NATGGSHVRGRRAARPVSAPDPS*GTAGPW
Trigger: CCAGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGC...AGAAACGGGCCTGGCGGCCCTCCTTCCTCTTACATGAGACCCTCCTGTGGCATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS GCA 90 bp CCCAAGTCCCAGCTGGGGCCATCCTTGCTTGGAGCAGGCAGCCTCTaGCCCTCTAAGCTGAGGTCCCTTGTCAGCACCACGGCAAGCCCC +
Preference number: 5 (lower is better)
Translates to: PKSQLGPSLLGAGSL*PSKLRSLVSTTASP
Trigger: GGGGCTTGCCGTGGTGCTGACAAGGGACCTCAGCTTAGAGGGGCAGAGGCTGCCTGCTCCAAGCAAGGATGGCCCCAGCTGGGACTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456069.1
CDS-3UTR CAA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGAAGTTAGTGACCGGCTaGGCACCGCGCTTGAGCCGT +
Preference number: 5 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLKLVTG*APRLSR
Trigger: ACGGCTCAAGCGCGGTGCCAAGCCGGTCACTAACTT...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp GCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGGCGCTGGAGCGCTCCTaGAGCTGCGGGTCGGTGGGG +
Preference number: 5 (lower is better)
Translates to: ALFSYGFGGGRASGLWRAALERS*SCGSVG
Trigger: CCCCACCGACCCGCAGCTCAAGGAGCGCTCCAGCGC...CGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp GAGCCCGTGCCGATCCGCGCTCCGCTCCCGAGGACTTCCAGGGAGGGGCCTGTGTCTTCAGCTATGGCTTaGGTGGTGGACGAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: EPVPIRAPLPRTSREGPVSSAMA*VVDELL
Trigger: CAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGA...CACAGGCCCCTCCCTGGAAGTCCTCGGGAGCGGAGCGCGGATCGGCACGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CCGTGTGGTCATCCTGACGCCAACGTCCGCGCAGTCCAGAGCCACGGGGGCTCCCCCCCATGTCCCTCCTaGACGACATCTTTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: PCGHPDANVRAVQSHGGSPPCPS*TTSFCP
Trigger: GGGACAGAAAGATGTCGTCAAGGAGGGACATGGGGG...GGAGCCCCCGTGGCTCTGGACTGCGCGGACGTTGGCGTCAGGATGACCACACGG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAGCCCCCATGTCCCTCCTaGACGACATCTTTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: LPQSAGGPQRHLTCPVGEPPCPS*TTSFCP
Trigger: GGGACAGAAAGATGTCGTCAAGGAGGGACATGGGGG...CTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp GCGAGGGGTGGGCCCTTCTCACCCTCTCTGTTCCCGTGGAGCGAGTGTGGAGCGCCCGTTTCTCGGTGGTaGGTGAAAGGCCCCCATGTC +
Preference number: 5 (lower is better)
Translates to: ARGGPFSPSLFPWSECGAPVSRW*VKGPHV
Trigger: GACATGGGGGCCTTTCACCAACCACCGAGAAACGGG...CGCTCCACACTCGCTCCACGGGAACAGAGAGGGTGAGAAGGGCCCACCCCTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGGAGCACCTCCAACAGCCTAGTGCCCACCCTGTGTaGCCTCAGGCGCCAAGGTGG +
Preference number: 5 (lower is better)
Translates to: PGGHVPDMPQCSEHLQQPSAHPV*PQAPRW
Trigger: CCACCTTGGCGCCTGAGGCAACACAGGGTGGGCACT...AGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp GCGAGGGGTGGGCCCTTCTCACCCTCTCTGTTCCCGTGGAGCGAGTGTGGAGCGAGAGAGGTGTGGCCATaGTCTGCGGGCACTGCCTCT +
Preference number: 5 (lower is better)
Translates to: ARGGPFSPSLFPWSECGAREVWP*SAGTAS
Trigger: AGAGGCAGTGCCCGCAGACAATGGCCACACCTCTCT...CGCTCCACACTCGCTCCACGGGAACAGAGAGGGTGAGAAGGGCCCACCCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp AGGAAGGGCCCCGCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCAGGAAGAGGCGCTCATaGGCCCCGAGGCCCCGGACC +
Preference number: 5 (lower is better)
Translates to: RKGPALFSYGFGGGRASGRKRRS*APRPRT
Trigger: GGTCCGGGGCCTCGGGGCCAATGAGCGCCTCTTCCT...GCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCGGGGCCCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp GGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGCCAGAGCCTCTCGGATGGCCCCCCCTCCCGCTGTGTTaGGGGACTGAATCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: GSRLLPKAQGLPEPLGWPPLPLC*GTESQH
Trigger: GTGCTGGGATTCAGTCCCCAAACACAGCGGGAGGGG...GGGCCATCCGAGAGGCTCTGGCAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CCTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAGGCTTGGCACCGCGCTaGAGCCGTCTCATATTTTCA +
Preference number: 5 (lower is better)
Translates to: PPPVCGWPSEAPDVPCGRGLAPR*SRLIFS
Trigger: TGAAAATATGAGACGGCTCAAGCGCGGTGCCAAGCC...TCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp CCCCTACAGGAGCCAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAACCCCTCCCGCTGTGTTaGGGGACTGAATCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: PLQEPDPRLRAGSVPIREPLPLC*GTESQH
Trigger: GTGCTGGGATTCAGTCCCCAAACACAGCGGGAGGGG...TTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTGGCTCCTGTAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAAGGCCGCCGTGTGCGGTGTCCGAGGCATTaGGAGACTCCGCTAGATCGA +
Preference number: 5 (lower is better)
Translates to: QTHGSERVLSPFGKGRRVRCPRH*ETPLDR
Trigger: TCGATCTAGCGGAGTCTCCAAATGCCTCGGACACCG...CACACGGCGGCCTTTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp GCGAGGGGTGGGCCCTTCTCACCCTCTCTGTTCCCGTGGAGCGAGTGTGGAGCGTGGAAATTGCCCTTCTaGGTGCTGTGGAAGCGACCG +
Preference number: 5 (lower is better)
Translates to: ARGGPFSPSLFPWSECGAWKLPF*VLWKRP
Trigger: CGGTCGCTTCCACAGCACCAAGAAGGGCAATTTCCA...CGCTCCACACTCGCTCCACGGGAACAGAGAGGGTGAGAAGGGCCCACCCCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp CCTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAAGGACAGACAGGACCTaGTACTTCTGGATGTCCGTG +
Preference number: 5 (lower is better)
Translates to: PPPVCGWPSEAPDVPCGRRTDRT*YFWMSV
Trigger: CACGGACATCCAGAAGTACAAGGTCCTGTCTGTCCT...TCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAGTCTTCAGCTATGGCTTaGGTGGTGGACGAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: LPQSAGGPQRHLTCPVGESSAMA*VVDELL
Trigger: CAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGA...CTCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CCCCTACAGGAGCCAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAATCCACAAATGCCACCTaGTTCCCGGGAAGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: PLQEPDPRLRAGSVPIRESTNAT*FPGSPG
Trigger: GCCTGGGCTTCCCGGGAACAAGGTGGCATTTGTGGA...TTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTGGCTCCTGTAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS GCA 90 bp TGTCCCGGGGCGAGGTCCGCGGTACCTTCAGGGGGATTTCGTCGCTaGATTCGGTGTCCGAGGCATTTGGAGACTCCGCTAGATCGAGGA +
Preference number: 5 (lower is better)
Translates to: CPGARSAVPSGGFRR*IRCPRHLETPLDRG
Trigger: TCCTCGATCTAGCGGAGTCTCCAAATGCCTCGGACACCGAATGCAGCGACGAAATCCCCCTGAAGGTACCGCGGACCTCGCCCCGGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000447351.5
CDS-3UTR CAA 90 bp GCGAGGGGTGGGCCCTTCTCACCCTCTCTGTTCCCGTGGAGCGAGTGTGGAGCGGCCGCTGAGGTGATCTaGATGTACTGGCTGAGAATG +
Preference number: 5 (lower is better)
Translates to: ARGGPFSPSLFPWSECGAAAEVI*MYWLRM
Trigger: CATTCTCAGCCAGTACATCAAGATCACCTCAGCGGC...CGCTCCACACTCGCTCCACGGGAACAGAGAGGGTGAGAAGGGCCCACCCCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp GAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTTTCTCTGGGGCTCGGCTCACGGTaGCTCCCTAAAGCACAGGGG +
Preference number: 5 (lower is better)
Translates to: ERDTRLREPLGVAGEVSLGLGSR*LPKAQG
Trigger: CCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCC...CAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCCTCTGGAGAGCGGAGTGCCCACCCTGTGTaGCCTCAGGCGCCAAGGTGG +
Preference number: 5 (lower is better)
Translates to: HSSAMALVVDELLASGERSAHPV*PQAPRW
Trigger: CCACCTTGGCGCCTGAGGCAACACAGGGTGGGCACT...CCGCTCTCCAGAGGCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp GCCCTCCCTGGGGGCTTCGGCCACACCTGGCACGTGGTCAGTTTTCATCTCCCTTGGAAATTGCCCTTCTaGGTGCTGTGGAAGCGACCG +
Preference number: 5 (lower is better)
Translates to: ALPGGFGHTWHVVSFHLPWKLPF*VLWKRP
Trigger: CGGTCGCTTCCACAGCACCAAGAAGGGCAATTTCCA...AGGGAGATGAAAACTGACCACGTGCCAGGTGTGGCCGAAGCCCCCAGGGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp GGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGCCAGAGCCTCTCGGATGGCCCAGGACAGACAGGACCTaGTACTTCTGGATGTCCGTG +
Preference number: 5 (lower is better)
Translates to: GSRLLPKAQGLPEPLGWPRTDRT*YFWMSV
Trigger: CACGGACATCCAGAAGTACAAGGTCCTGTCTGTCCT...GGGCCATCCGAGAGGCTCTGGCAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CTCTGGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTGAGCGGGACACAAGGTaGCGAGAACCTCTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: LWRAGHKVARTSWGGWRGERDTR*REPLGV
Trigger: CACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTC...ACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CTCTGGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTTCCACAAATGCCACCTaGTTCCCGGGAAGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LWRAGHKVARTSWGGWRGSTNAT*FPGSPG
Trigger: GCCTGGGCTTCCCGGGAACAAGGTGGCATTTGTGGA...ACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CTCTGGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTCGCAGCATCTCCGCGTaGGTTTCTTCTCGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LWRAGHKVARTSWGGWRGRSISA*VSSRSF
Trigger: GAAGCTGCGAGAAGAAACCAACGCGGAGATGCTGCG...ACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp AGGCGCTCATTGGCCCCGAGGCCCCGGACCCATCCTTGGGCACTGCCGGGCCCTTCGTTTTCTGTCAGATaGAAGATCTCGTGGAAATTG +
Preference number: 5 (lower is better)
Translates to: RRSLAPRPRTHPWALPGPSFSVR*KISWKL
Trigger: CAATTTCCACGAGATCTTCAATCTGACAGAAAACGA...AGGGCCCGGCAGTGCCCAAGGATGGGTCCGGGGCCTCGGGGCCAATGAGCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp AATGCCACAGGAGGGTCTCATGTAAGAGGAAGGAGGGCCGCCAGGCCCGTTTCTATCTTCCGGTCCCTGTaGATGAGGCAGCAGCGCCAG +
Preference number: 5 (lower is better)
Translates to: NATGGSHVRGRRAARPVSIFRSL*MRQQRQ
Trigger: CTGGCGCTGCTGCCTCATCAACAGGGACCGGAAGAT...AGAAACGGGCCTGGCGGCCCTCCTTCCTCTTACATGAGACCCTCCTGTGGCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGTTTGAGGACCCAGATTaGGAGCTTTCGAAGCACAAG +
Preference number: 5 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLFEDPD*ELSKHK
Trigger: CTTGTGCTTCGAAAGCTCCAAATCTGGGTCCTCAAA...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CCTCCCCCAGTCTGCGGGTGGCCCTCAGAGGCACCTGACGTGCCCTGTGGGAGAACTAGCTTGATGACTTaGTTCCTCTTTGAGGACCCA +
Preference number: 5 (lower is better)
Translates to: PPPVCGWPSEAPDVPCGRTSLMT*FLFEDP
Trigger: TGGGTCCTCAAAGAGGAACAAAGTCATCAAGCTAGT...TCTCCCACAGGGCACGTCAGGTGCCTCTGAGGGCCACCCGCAGACTGGGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp AATGCCACAGGAGGGTCTCATGTAAGAGGAAGGAGGGCCGCCAGGCCCGTTTCTGAGCGGGACACAAGGTaGCGAGAACCTCTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: NATGGSHVRGRRAARPVSERDTR*REPLGV
Trigger: CACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTC...AGAAACGGGCCTGGCGGCCCTCCTTCCTCTTACATGAGACCCTCCTGTGGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCAGTGCCCACCCTGTGTaGCCTCAGGCGCCAAGGTGG +
Preference number: 5 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFSAHPV*PQAPRW
Trigger: CCACCTTGGCGCCTGAGGCAACACAGGGTGGGCACT...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CAACCCAGGCAACCGCAGCCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGCCTCTGAACCTGATTTaGTCCAACCTCCTTAGCATG +
Preference number: 5 (lower is better)
Translates to: QPRQPQPGGHVPDMPQCSPLNLI*SNLLSM
Trigger: CATGCTAAGGAGGTTGGACAAAATCAGGTTCAGAGG...CGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp GCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGACGCGGTGCTGAGCACATGAACAAGTTCTaGATCTTCTCCAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: AGVSGREQQAGPYRRGAEHMNKF*IFSRMS
Trigger: TGACATCCTGGAGAAGATCAAGAACTTGTTCATGTG...CTCAGCACCGCGTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGGCGCTGGAGCGCTCCTaGAGCTGCGGGTCGGTGGGG +
Preference number: 5 (lower is better)
Translates to: WSVFISLSPQKGLELNHPALERS*SCGSVG
Trigger: CCCCACCGACCCGCAGCTCAAGGAGCGCTCCAGCGC...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp CCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGGAGCACCTCCAACAGCCTAAGATCTCGTGGAAATaGCCCTTCTTGGTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: PGGHVPDMPQCSEHLQQPKISWK*PFLVLW
Trigger: CCACAGCACCAAGAAGGGCAATTTCCACGAGATCTT...AGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp GCCGGCGTGTCAGGCCGAGAGCAGCAGGCAGGCCCTTACAGACGCGGTGCTGAGGTGATGTCCACTAGCTaGATGACTTTGTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: AGVSGREQQAGPYRRGAEVMSTS*MTLFLF
Trigger: AAAGAGGAACAAAGTCATCAAGCTAGTGGACATCAC...CTCAGCACCGCGTCTGTAAGGGCCTGCCTGCTGCTCTCGGCCTGACACGCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp GAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTTTCTCTGAGCCCTGGCCCCTTCTaGGTCGATAAAACGCAGAGG +
Preference number: 5 (lower is better)
Translates to: ERDTRLREPLGVAGEVSLSPGPF*VDKTQR
Trigger: CCTCTGCGTTTTATCGACCAAGAAGGGGCCAGGGCT...CAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp AATGCCACAGGAGGGTCTCATGTAAGAGGAAGGAGGGCCGCCAGGCCCGTTTCTCCCCCATGTCCCTCCTaGACGACATCTTTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: NATGGSHVRGRRAARPVSPPCPS*TTSFCP
Trigger: GGGACAGAAAGATGTCGTCAAGGAGGGACATGGGGG...AGAAACGGGCCTGGCGGCCCTCCTTCCTCTTACATGAGACCCTCCTGTGGCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp GTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCGGGCTCGGCTCACGGTaGCTCCCTAAAGCACAGGGG +
Preference number: 5 (lower is better)
Translates to: VRKMCFYLHHPVPLLVPSGLGSR*LPKAQG
Trigger: CCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCC...GCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS CCA 90 bp CACACCGCCAGCGGACGCTCGTTTTCTGTCAGATTGAAGATCTCGTaGAAATTGCCCTTCTTGGTGCTGTGGAAGCGACCGGCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: HTASGRSFSVRLKIS*KLPFLVLWKRPASS
Trigger: GGAGGACGCCGGTCGCTTCCACAGCACCAAGAAGGGCAATTTCCACGAGATCTTCAATCTGACAGAAAACGAGCGTCCGCTGGCGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp CCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGGAGCACCTCCAACAGCCTCCTCTGAACCTGATTTaGTCCAACCTCCTTAGCATG +
Preference number: 5 (lower is better)
Translates to: PGGHVPDMPQCSEHLQQPPLNLI*SNLLSM
Trigger: CATGCTAAGGAGGTTGGACAAAATCAGGTTCAGAGG...AGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAACCTGGGCCTGCCCTTTaGGGGGCTGCTGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKPGPAL*GAAEPS
Trigger: AGATGGCTCAGCAGCCCCCAAAAGGGCAGGCCCAGG...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGCACATGAACAAGTTCTaGATCTTCTCCAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLHMNKF*IFSRMS
Trigger: TGACATCCTGGAGAAGATCAAGAACTTGTTCATGTG...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp CCCCTACAGGAGCCAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAATTTGAGGACCCAGATTaGGAGCTTTCGAAGCACAAG +
Preference number: 5 (lower is better)
Translates to: PLQEPDPRLRAGSVPIREFEDPD*ELSKHK
Trigger: CTTGTGCTTCGAAAGCTCCAAATCTGGGTCCTCAAA...TTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTGGCTCCTGTAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp GGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGCCAGAGCCTCTCGGATGGCCCACTAGCTTGATGACTTaGTTCCTCTTTGAGGACCCA +
Preference number: 5 (lower is better)
Translates to: GSRLLPKAQGLPEPLGWPTSLMT*FLFEDP
Trigger: TGGGTCCTCAAAGAGGAACAAAGTCATCAAGCTAGT...GGGCCATCCGAGAGGCTCTGGCAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CAACCCAGGCAACCGCAGCCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGACTAGCTTGATGACTTaGTTCCTCTTTGAGGACCCA +
Preference number: 5 (lower is better)
Translates to: QPRQPQPGGHVPDMPQCSTSLMT*FLFEDP
Trigger: TGGGTCCTCAAAGAGGAACAAAGTCATCAAGCTAGT...CGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGGCTGCGGTTGCCTGGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp AGGAAGGGCCCCGCACTCTTCAGCTATGGCTTTGGTGGTGGACGAGCTTCTGGCAGGACAGACAGGACCTaGTACTTCTGGATGTCCGTG +
Preference number: 5 (lower is better)
Translates to: RKGPALFSYGFGGGRASGRTDRT*YFWMSV
Trigger: CACGGACATCCAGAAGTACAAGGTCCTGTCTGTCCT...GCCAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGAGTGCGGGGCCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCCCCGTTTCTCGGTGGTaGGTGAAAGGCCCCCATGTC +
Preference number: 5 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFPVSRW*VKGPHV
Trigger: GACATGGGGGCCTTTCACCAACCACCGAGAAACGGG...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp TCTGCGGCCCCTCGTGAAGGGGGTGAAACCAGCCCATGCCGCCGGATCCCTCACTCGTTTTCTGTCAGATaGAAGATCTCGTGGAAATTG +
Preference number: 5 (lower is better)
Translates to: SAAPREGGETSPCRRIPHSFSVR*KISWKL
Trigger: CAATTTCCACGAGATCTTCAATCTGACAGAAAACGA...GTGAGGGATCCGGCGGCATGGGCTGGTTTCACCCCCTTCACGAGGGGCCGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp GTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCATCTTCCGGTCCCTGTaGATGAGGCAGCAGCGCCAG +
Preference number: 5 (lower is better)
Translates to: VRKMCFYLHHPVPLLVPSIFRSL*MRQQRQ
Trigger: CTGGCGCTGCTGCCTCATCAACAGGGACCGGAAGAT...GCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CAGTGCAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGTGATGTCCACTAGCTaGATGACTTTGTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: QCRPRPLGSAHGCSLKHRVMSTS*MTLFLF
Trigger: AAAGAGGAACAAAGTCATCAAGCTAGTGGACATCAC...CCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp AATGCCACAGGAGGGTCTCATGTAAGAGGAAGGAGGGCCGCCAGGCCCGTTTCTGCCGCTGAGGTGATCTaGATGTACTGGCTGAGAATG +
Preference number: 5 (lower is better)
Translates to: NATGGSHVRGRRAARPVSAAEVI*MYWLRM
Trigger: CATTCTCAGCCAGTACATCAAGATCACCTCAGCGGC...AGAAACGGGCCTGGCGGCCCTCCTTCCTCTTACATGAGACCCTCCTGTGGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CAGGCCCAGGCCTCTGGGCTCGGCTCACGGTTGCTCCCTAAAGCACAGGGGCTGAGTACAATCCTTTTGTaGAACAAAAGTCACACTGGC +
Preference number: 5 (lower is better)
Translates to: QAQASGLGSRLLPKAQGLSTILL*NKSHTG
Trigger: GCCAGTGTGACTTTTGTTCAACAAAAGGATTGTACT...CAGCCCCTGTGCTTTAGGGAGCAACCGTGAGCCGAGCCCAGAGGCCTGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS GCA 90 bp ATCTTGATGTACTGGCTGAGAATGGTCTCGAAGGCCTCATCCCTGTaGACCATGGCACCAAACACGAGCGGTTTCTGGGTGGATGGCGTC +
Preference number: 5 (lower is better)
Translates to: ILMYWLRMVSKASSL*TMAPNTSGFWVDGV
Trigger: GACGCCATCCACCCAGAAACCGCTCGTGTTTGGTGCCATGGTGCACAGGGATGAGGCCTTCGAGACCATTCTCAGCCAGTACATCAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CTCTGGAGAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTTTTGAGGACCCAGATTaGGAGCTTTCGAAGCACAAG +
Preference number: 5 (lower is better)
Translates to: LWRAGHKVARTSWGGWRGFEDPD*ELSKHK
Trigger: CTTGTGCTTCGAAAGCTCCAAATCTGGGTCCTCAAA...ACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTCTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CCCCTACAGGAGCCAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAGTGATGTCCACTAGCTaGATGACTTTGTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: PLQEPDPRLRAGSVPIREVMSTS*MTLFLF
Trigger: AAAGAGGAACAAAGTCATCAAGCTAGTGGACATCAC...TTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTGGCTCCTGTAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CCTGGGGGCCATGTGCCAGACATGCCACAGTGCTCGGAGCACCTCCAACAGCCTCATGAGGATGTCCAATaGTTTCCACTACCAAATCGT +
Preference number: 5 (lower is better)
Translates to: PGGHVPDMPQCSEHLQQPHEDVQ*FPLPNR
Trigger: ACGATTTGGTAGTGGAAACAATTGGACATCCTCATG...AGGCTGTTGGAGGTGCTCCGAGCACTGTGGCATGTCTGGCACATGGCCCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS TCA 90 bp AGCCATTCTCGCACACCGCCAGCGGACGCTCGTTTTCTGTCAGATTaGAGATCTCGTGGAAATTGCCCTTCTTGGTGCTGTGGAAGCGAC +
Preference number: 5 (lower is better)
Translates to: SHSRTPPADARFLSD*RSRGNCPSWCCGSD
Trigger: GTCGCTTCCACAGCACCAAGAAGGGCAATTTCCACGAGATCTTCAATCTGACAGAAAACGAGCGTCCGCTGGCGGTGTGCGAGAATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS CCA 90 bp CCTTTGATCTCATTCAGTCGATCAAACTCTGTCCGGTTAAAGTCCTaGACTCCTGTGGCCATGATGAGGGTCCCTGGACCAGCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: PLISFSRSNSVRLKS*TPVAMMRVPGPAGS
Trigger: GGACCCTGCTGGTCCAGGGACCCTCATCATGGCCACAGGAGTCCAGGACTTTAACCGGACAGAGTTTGATCGACTGAATGAGATCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000447351.5
CDS CCA 90 bp CAGATACATCCAGAAACACTCTTTCACTGTGGCTCCTTCAGGTCCTaGCCCAGAACCAGGATGTGCTACGAGGACCCAGGAACCATAGCC +
Preference number: 5 (lower is better)
Translates to: QIHPETLFHCGSFRS*PRTRMCYEDPGTIA
Trigger: GGCTATGGTTCCTGGGTCCTCGTAGCACATCCTGGTTCTGGGCCAGGACCTGAAGGAGCCACAGTGAAAGAGTGTTTCTGGATGTATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406902.6
CDS-3UTR CAA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAAGGTTGCGAGAACCTCTaGGGGTGGCTGGAGAGGTTT +
Preference number: 5 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKGCENL*GWLERF
Trigger: AAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACC...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp AAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGAGGTTGCGAGAACCTCTaGGGGTGGCTGGAGAGGTTT +
Preference number: 5 (lower is better)
Translates to: KMCFYLHHPVPLLVPSYRGCENL*GWLERF
Trigger: AAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACC...TCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp CCCCTACAGGAGCCAGACCCACGGCTCAGAGCGGGTTCTGTCCCCATTCGGGAAAGTACAATCCTTTTGTaGAACAAAAGTCACACTGGC +
Preference number: 5 (lower is better)
Translates to: PLQEPDPRLRAGSVPIRESTILL*NKSHTG
Trigger: GCCAGTGTGACTTTTGTTCAACAAAAGGATTGTACT...TTCCCGAATGGGGACAGAACCCGCTCTGAGCCGTGGGTCTGGCTCCTGTAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS CCA 90 bp TTCCCTCCGTCTGTCTCAGATACATCCAGAAACACTCTTTCACTGTaGCTCCTTCAGGTCCTGGCCCAGAACCAGGATGTGCTACGAGGA +
Preference number: 5 (lower is better)
Translates to: FPPSVSDTSRNTLSL*LLQVLAQNQDVLRG
Trigger: TCCTCGTAGCACATCCTGGTTCTGGGCCAGGACCTGAAGGAGCCACAGTGAAAGAGTGTTTCTGGATGTATCTGAGACAGACGGAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406902.6
CDS CCA 90 bp CCTTTGATCTCATTCAGTCGATCAAACTCTGTCCGGTTAAAGTCCTaGACTCCTGTGGCCATGATGAGGGTCCCTGGACCAGCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: PLISFSRSNSVRLKS*TPVAMMRVPGPAFR
Trigger: CCTGAAGGCTGGTCCAGGGACCCTCATCATGGCCACAGGAGTCCAGGACTTTAACCGGACAGAGTTTGATCGACTGAATGAGATCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490378.1
CDS-3UTR CAA 90 bp CGTTTCTCGGTGGTTGGTGAAAGGCCCCCATGTCCCTCCTTGACGACATCTTTCAAGATCTCGTGGAAATaGCCCTTCTTGGTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: RFSVVGERPPCPSLTTSFKISWK*PFLVLW
Trigger: CCACAGCACCAAGAAGGGCAATTTCCACGAGATCTT...GAAAGATGTCGTCAAGGAGGGACATGGGGGCCTTTCACCAACCACCGAGAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGATCTTCCGGTCCCTGTaGATGAGGCAGCAGCGCCAG +
Preference number: 5 (lower is better)
Translates to: WSVFISLSPQKGLELNHPIFRSL*MRQQRQ
Trigger: CTGGCGCTGCTGCCTCATCAACAGGGACCGGAAGAT...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGAGAGAGGTGTGGCCATaGTCTGCGGGCACTGCCTCT +
Preference number: 5 (lower is better)
Translates to: WSVFISLSPQKGLELNHPREVWP*SAGTAS
Trigger: AGAGGCAGTGCCCGCAGACAATGGCCACACCTCTCT...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp TGGTCAGTTTTCATCTCCCTTTCTCCACAAAAGGGACTCGAACTAAACCACCCGCAGTCAGGTCTTCCTTaGGAGGTTCCACGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: WSVFISLSPQKGLELNHPQSGLP*EVPRAQ
Trigger: CTGAGCCCGTGGAACCTCCAAAGGAAGACCTGACTG...CGGGTGGTTTAGTTCGAGTCCCTTTTGTGGAGAAAGGGAGATGAAAACTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp CAACAGCCTTCGCGGATGTTCTCCTGGGCCTTCCAAAGAGCAAAGTGTGAGAAAGCCGCTGAGGTGATCTaGATGTACTGGCTGAGAATG +
Preference number: 5 (lower is better)
Translates to: QQPSRMFSWAFQRAKCEKAAEVI*MYWLRM
Trigger: CATTCTCAGCCAGTACATCAAGATCACCTCAGCGGC...TTTCTCACACTTTGCTCTTTGGAAGGCCCAGGAGAACATCCGCGAAGGCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp GAGCGGGACACAAGGTTGCGAGAACCTCTTGGGGTGGCTGGAGAGGTTTCTCTGCATGAGGATGTCCAATaGTTTCCACTACCAAATCGT +
Preference number: 5 (lower is better)
Translates to: ERDTRLREPLGVAGEVSLHEDVQ*FPLPNR
Trigger: ACGATTTGGTAGTGGAAACAATTGGACATCCTCATG...CAGAGAAACCTCTCCAGCCACCCCAAGAGGTTCTCGCAACCTTGTGTCCCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp AAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTGGTCCCCAGCTACAGATCTTCAGCTATGGCTTaGGTGGTGGACGAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: KMCFYLHHPVPLLVPSYRSSAMA*VVDELL
Trigger: CAGAAGCTCGTCCACCACCAAAGCCATAGCTGAAGA...TCTGTAGCTGGGGACCAGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp AGAGCAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTTCCACAAATGCCACCTaGTTCCCGGGAAGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: RAKCEKDVLLPAPSCALTSTNAT*FPGSPG
Trigger: GCCTGGGCTTCCCGGGAACAAGGTGGCATTTGTGGA...AGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp AGAATTATTGCAAAAGCTCATGAGGATGTCCAATTGTTTCCACTACCAAATCGTCGGCGCTCTGCTCCATaGCTGGCCTGGGCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: RIIAKAHEDVQLFPLPNRRRSAP*LAWACP
Trigger: AGGGCAGGCCCAGGCCAGCAATGGAGCAGAGCGCCG...ACGATTTGGTAGTGGAAACAATTGGACATCCTCATGAGCTTTTGCAATAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp AGAGCAAAGTGTGAGAAAGATGTGCTTTTACCTGCACCATCCTGTGCCCTTACTAGCCCTGGCCCCTTCTaGGTCGATAAAACGCAGAGG +
Preference number: 5 (lower is better)
Translates to: RAKCEKDVLLPAPSCALTSPGPF*VDKTQR
Trigger: CCTCTGCGTTTTATCGACCAAGAAGGGGCCAGGGCT...AGTAAGGGCACAGGATGGTGCAGGTAAAAGCACATCTTTCTCACACTTTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp AATGCCACAGGAGGGTCTCATGTAAGAGGAAGGAGGGCCGCCAGGCCCGTTTCTAGTACAATCCTTTTGTaGAACAAAAGTCACACTGGC +
Preference number: 5 (lower is better)
Translates to: NATGGSHVRGRRAARPVSSTILL*NKSHTG
Trigger: GCCAGTGTGACTTTTGTTCAACAAAAGGATTGTACT...AGAAACGGGCCTGGCGGCCCTCCTTCCTCTTACATGAGACCCTCCTGTGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS-3UTR CAA 90 bp AGAATTATTGCAAAAGCTCATGAGGATGTCCAATTGTTTCCACTACCAAATCGTCGGTGTCCGAGGCATTaGGAGACTCCGCTAGATCGA +
Preference number: 5 (lower is better)
Translates to: RIIAKAHEDVQLFPLPNRRCPRH*ETPLDR
Trigger: TCGATCTAGCGGAGTCTCCAAATGCCTCGGACACCG...ACGATTTGGTAGTGGAAACAATTGGACATCCTCATGAGCTTTTGCAATAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS-3UTR CAA 90 bp AGAATTATTGCAAAAGCTCATGAGGATGTCCAATTGTTTCCACTACCAAATCGTAGCCCTGGCCCCTTCTaGGTCGATAAAACGCAGAGG +
Preference number: 5 (lower is better)
Translates to: RIIAKAHEDVQLFPLPNRSPGPF*VDKTQR
Trigger: CCTCTGCGTTTTATCGACCAAGAAGGGGCCAGGGCT...ACGATTTGGTAGTGGAAACAATTGGACATCCTCATGAGCTTTTGCAATAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS CCA 72 bp CGGCGTCCTCCTCTTTACCCAGGCCGGCCGGTGCGCTaGGTACGTAGCTCCGTGACGAGGTCGTCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: RRPPLYPGRPVR*VRSSVTRSSAA
Trigger: GGCTGCAGACGACCTCGTCACGGAGCTACGTACCCAGCGCACCGGCCGGCCTGGGTAAAGAGGAGGACGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS GCA 72 bp CAGCTGGGGCCATCCTTGCTTGGAGCAGGCAGCCTCTaGCCCTCTAAGCTGAGGTCCCTTGTCAGCACCACG +
Preference number: 6 (lower is better)
Translates to: QLGPSLLGAGSL*PSKLRSLVSTT
Trigger: CGTGGTGCTGACAAGGGACCTCAGCTTAGAGGGGCAGAGGCTGCCTGCTCCAAGCAAGGATGGCCCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456069.1
CDS GCA 72 bp GCGAGGTCCGCGGTACCTTCAGGGGGATTTCGTCGCTaGATTCGGTGTCCGAGGCATTTGGAGACTCCGCTA +
Preference number: 6 (lower is better)
Translates to: ARSAVPSGGFRR*IRCPRHLETPL
Trigger: TAGCGGAGTCTCCAAATGCCTCGGACACCGAATGCAGCGACGAAATCCCCCTGAAGGTACCGCGGACCTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000447351.5
CDS GCA 72 bp GGGTCCCTGGACCAGCCTTCAGGGGGATTTCGTCGCTaGATTCGGTGTCCGAGGCATTTGGAGACTCCGCTA +
Preference number: 6 (lower is better)
Translates to: GSLDQPSGGFRR*IRCPRHLETPL
Trigger: TAGCGGAGTCTCCAAATGCCTCGGACACCGAATGCAGCGACGAAATCCCCCTGAAGGCTGGTCCAGGGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490378.1
CDS TCA 72 bp ATGTTCAGCACTGAGGTCCTCTGCTTCACCCTAACATaGCGCTCGGGTTCCCTTGGGAGTCCCACAGGCATC +
Preference number: 6 (lower is better)
Translates to: MFSTEVLCFTLT*RSGSLGSPTGI
Trigger: GATGCCTGTGGGACTCCCAAGGGAACCCGAGCGTCATGTTAGGGTGAAGCAGAGGACCTCAGTGCTGAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447351.5
CDS GCA 72 bp TACTGGCTGAGAATGGTCTCGAAGGCCTCATCCCTGTaGACCATGGCACCAAACACGAGCGGTTTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: YWLRMVSKASSL*TMAPNTSGFWV
Trigger: CACCCAGAAACCGCTCGTGTTTGGTGCCATGGTGCACAGGGATGAGGCCTTCGAGACCATTCTCAGCCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS CAA 72 bp GGGGGATTTCGTCGCTGCATTCGGTGTCCGAGGCATTaGGAGACTCCGCTAGATCGAGGAAGTCATCTCTCT +
Preference number: 6 (lower is better)
Translates to: GGFRRCIRCPRH*ETPLDRGSHLS
Trigger: AGAGAGATGACTTCCTCGATCTAGCGGAGTCTCCAAATGCCTCGGACACCGAATGCAGCGACGAAATCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000447351.5
CDS CAA 90 bp GTACCTTCAGGGGGATTTCGTCGCTGCATTCGGTGTCCGAGGCATTaGGAGACTCCGCTAGATCGAGGAAGTCATCTCTCTTGTGACCTC +
Preference number: 6 (lower is better)
Translates to: VPSGGFRRCIRCPRH*ETPLDRGSHLSCDL
Trigger: GAGGTCACAAGAGAGATGACTTCCTCGATCTAGCGGAGTCTCCAAATGCCTCGGACACCGAATGCAGCGACGAAATCCCCCTGAAGGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000447351.5
CDS CAA 90 bp GCCAGCGGACGCTCGTTTTCTGTCAGATTGAAGATCTCGTGGAAATaGCCCTTCTTGGTGCTGTGGAAGCGACCGGCGTCCTCCTCTTTA +
Preference number: 6 (lower is better)
Translates to: ASGRSFSVRLKISWK*PFLVLWKRPASSSL
Trigger: TAAAGAGGAGGACGCCGGTCGCTTCCACAGCACCAAGAAGGGCAATTTCCACGAGATCTTCAATCTGACAGAAAACGAGCGTCCGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS CAA 90 bp CAGCCATTCTCGCACACCGCCAGCGGACGCTCGTTTTCTGTCAGATaGAAGATCTCGTGGAAATTGCCCTTCTTGGTGCTGTGGAAGCGA +
Preference number: 6 (lower is better)
Translates to: QPFSHTASGRSFSVR*KISWKLPFLVLWKR
Trigger: TCGCTTCCACAGCACCAAGAAGGGCAATTTCCACGAGATCTTCAATCTGACAGAAAACGAGCGTCCGCTGGCGGTGTGCGAGAATGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS TCA 72 bp CGCACACCGCCAGCGGACGCTCGTTTTCTGTCAGATTaGAGATCTCGTGGAAATTGCCCTTCTTGGTGCTGT +
Preference number: 6 (lower is better)
Translates to: RTPPADARFLSD*RSRGNCPSWCC
Trigger: ACAGCACCAAGAAGGGCAATTTCCACGAGATCTTCAATCTGACAGAAAACGAGCGTCCGCTGGCGGTGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS TCA 72 bp AAGTCAATACTAGCTGTCCCCGCCAGACGCTGCCGCTaGGGTGATCTTGATGTACTGGCTGAGAATGGTCTC +
Preference number: 6 (lower is better)
Translates to: KSILAVPARRCR*GDLDVLAENGL
Trigger: GAGACCATTCTCAGCCAGTACATCAAGATCACCTCAGCGGCAGCGTCTGGCGGGGACAGCTAGTATTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS CAA 72 bp CGCTCGTTTTCTGTCAGATTGAAGATCTCGTGGAAATaGCCCTTCTTGGTGCTGTGGAAGCGACCGGCGTCC +
Preference number: 6 (lower is better)
Translates to: RSFSVRLKISWK*PFLVLWKRPAS
Trigger: GGACGCCGGTCGCTTCCACAGCACCAAGAAGGGCAATTTCCACGAGATCTTCAATCTGACAGAAAACGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS CAA 72 bp TCGCACACCGCCAGCGGACGCTCGTTTTCTGTCAGATaGAAGATCTCGTGGAAATTGCCCTTCTTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: SHTASGRSFSVR*KISWKLPFLVL
Trigger: CAGCACCAAGAAGGGCAATTTCCACGAGATCTTCAATCTGACAGAAAACGAGCGTCCGCTGGCGGTGTGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS TCA 72 bp ATGTTCAGCACTGAGGTCCTCTGCTTCACCCTAACATaGCGCTCGGGTTCCCTCCGTCTGTCTCAGATACAT +
Preference number: 6 (lower is better)
Translates to: MFSTEVLCFTLT*RSGSLRLSQIH
Trigger: ATGTATCTGAGACAGACGGAGGGAACCCGAGCGTCATGTTAGGGTGAAGCAGAGGACCTCAGTGCTGAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406902.6
CDS CCA 72 bp TCATTCAGTCGATCAAACTCTGTCCGGTTAAAGTCCTaGACTCCTGTGGCCATGATGAGGGTCCCTGGACCA +
Preference number: 6 (lower is better)
Translates to: SFSRSNSVRLKS*TPVAMMRVPGP
Trigger: TGGTCCAGGGACCCTCATCATGGCCACAGGAGTCCAGGACTTTAACCGGACAGAGTTTGATCGACTGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000447351.5
ENST00000490378.1
CDS CCA 72 bp AGCGGACGCTCGTTTTCTGTCAGATTGAAGATCTCGTaGAAATTGCCCTTCTTGGTGCTGTGGAAGCGACCG +
Preference number: 6 (lower is better)
Translates to: SGRSFSVRLKIS*KLPFLVLWKRP
Trigger: CGGTCGCTTCCACAGCACCAAGAAGGGCAATTTCCACGAGATCTTCAATCTGACAGAAAACGAGCGTCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS CAA 72 bp TCTGTCAGATTGAAGATCTCGTGGAAATTGCCCTTCTaGGTGCTGTGGAAGCGACCGGCGTCCTCCTCTTTA +
Preference number: 6 (lower is better)
Translates to: SVRLKISWKLPF*VLWKRPASSSL
Trigger: TAAAGAGGAGGACGCCGGTCGCTTCCACAGCACCAAGAAGGGCAATTTCCACGAGATCTTCAATCTGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361034.7
ENST00000406902.6
CDS TCA 72 bp GGAGACTCCGCTAGATCGAGGAAGTCATCTCTCTTGTaGCCTCTGAACCTGATTTTGTCCAACCTCCTTAGC +
Preference number: 6 (lower is better)
Translates to: GDSARSRKSSLL*PLNLILSNLLS
Trigger: GCTAAGGAGGTTGGACAAAATCAGGTTCAGAGGTCACAAGAGAGATGACTTCCTCGATCTAGCGGAGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000431155.1
ENST00000447351.5
CDS CAA 72 bp AAGGCAGAGAGGTTCTTCACAAAGTTAGTGACCGGCTaGGCACCGCGCTTGAGCCGTCTCATATTTTCAGTT +
Preference number: 6 (lower is better)
Translates to: KAERFFTKLVTG*APRLSRLIFSV
Trigger: AACTGAAAATATGAGACGGCTCAAGCGCGGTGCCAAGCCGGTCACTAACTTTGTGAAGAACCTCTCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000456069.1
CDS CAA 72 bp TTCTGGATGTCCGTGATGTCCACTAGCTTGATGACTTaGTTCCTCTTTGAGGACCCAGATTTGGAGCTTTCG +
Preference number: 6 (lower is better)
Translates to: FWMSVMSTSLMT*FLFEDPDLELS
Trigger: CGAAAGCTCCAAATCTGGGTCCTCAAAGAGGAACAAAGTCATCAAGCTAGTGGACATCACGGACATCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1
CDS CAA 72 bp ACCTTGTACTTCTGGATGTCCGTGATGTCCACTAGCTaGATGACTTTGTTCCTCTTTGAGGACCCAGATTTG +
Preference number: 6 (lower is better)
Translates to: TLYFWMSVMSTS*MTLFLFEDPDL
Trigger: CAAATCTGGGTCCTCAAAGAGGAACAAAGTCATCAAGCTAGTGGACATCACGGACATCCAGAAGTACAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361034.7
ENST00000406902.6
ENST00000408031.1