RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRAMD2B (Homo sapiens)

Ensembl gene IDs: ENSG00000155324

Ensembl transcript IDs: ENST00000285689.8, ENST00000502348.5, ENST00000504859.5, ENST00000505441.1, ENST00000505720.1, ENST00000506445.5, ENST00000508523.5, ENST00000511134.1, ENST00000513040.5, ENST00000513913.5, ENST00000513978.5, ENST00000514099.5, ENST00000514932.5, ENST00000515200.5, ENST00000542322.5, ENST00000544396.5

Found 782 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTaGACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGA +
Preference number: 1 (lower is better)
Translates to: LSWRPPHAMSGFSSA*TSDQQGALKQNASG
Trigger: TCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR TCA 90 bp GAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTaGCCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTT +
Preference number: 1 (lower is better)
Translates to: ETSTCNVWILICLHL*PAGCTQTKRLRKHL
Trigger: AAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR GCA 90 bp TCCTTCAGGTACTCTGTTCACATGGGCATCTGCCCGAGTTGGCTTTaGTTCTCCCTTGGAGACATTCAGAACTGTTTGGGATTCTGTCGC +
Preference number: 1 (lower is better)
Translates to: SFRYSVHMGICPSWL*FSLGDIQNCLGFCR
Trigger: GCGACAGAATCCCAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR CCA 90 bp TGTACAGGGAGACTCTTGGCTTTTCCTTCAGGTACTCTGTTCACATaGGCATCTGCCCGAGTTGGCTTTGCTTCTCCCTTGGAGACATTC +
Preference number: 1 (lower is better)
Translates to: CTGRLLAFPSGTLFT*ASARVGFASPLETF
Trigger: GAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR GCA 90 bp GAGACTCTTGGCTTTTCCTTCAGGTACTCTGTTCACATGGGCATCTaGCCGAGTTGGCTTTGCTTCTCCCTTGGAGACATTCAGAACTGT +
Preference number: 1 (lower is better)
Translates to: ETLGFSFRYSVHMGI*PSWLCFSLGDIQNC
Trigger: ACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR CCA 90 bp GGCTTTTCCTTCAGGTACTCTGTTCACATGGGCATCTGCCCGAGTTaGCTTTGCTTCTCCCTTGGAGACATTCAGAACTGTTTGGGATTC +
Preference number: 1 (lower is better)
Translates to: GFSFRYSVHMGICPS*LCFSLGDIQNCLGF
Trigger: GAATCCCAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR CCA 90 bp TATTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTaGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACC +
Preference number: 1 (lower is better)
Translates to: YCTRTKIISLLTFLS*RPPHAMSGFSSACT
Trigger: GGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR TCA 90 bp GATTCTGTCGCATGGAAATCTCGAGAGTTCTCAGATTCAGGAGTTTaGGAACCAGAACTGCTATATCCTTCCATGTCTTGCCTTCTTTGT +
Preference number: 1 (lower is better)
Translates to: DSVAWKSREFSDSGV*EPELLYPSMSCLLC
Trigger: ACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGATTTCCATGCGACAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR GCA 90 bp GGAAATCTCGAGAGTTCTCAGATTCAGGAGTTTGAGAACCAGAACTaGTATATCCTTCCATGTCTTGCCTTCTTTGTTGAACCACTCCAT +
Preference number: 1 (lower is better)
Translates to: GNLESSQIQEFENQN*YILPCLAFFVEPLH
Trigger: ATGGAGTGGTTCAACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR TCA 90 bp ACTTTTATTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTaGGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTT +
Preference number: 1 (lower is better)
Translates to: TFIAQEPKLFPSSLS*AGDLHMQCLDSHLL
Trigger: AAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAATAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR TCA 90 bp TTATTTTGTATCTTTTCTAATTTCACTATGTTAGCTGTAAGCTCTTaGCAGAGAACCTCCACATTGAATTGTACTTGTGACCTCAGGCCA +
Preference number: 1 (lower is better)
Translates to: LFCIFSNFTMLAVSS*QRTSTLNCTCDLRP
Trigger: TGGCCTGAGGTCACAAGTACAATTCAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAACATAGTGAAATTAGAAAAGATACAAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR TCA 90 bp CATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCCCCTCCTCACTTTCCTaGGCTGGAGACCTCCACATG +
Preference number: 2 (lower is better)
Translates to: HRGNYPRECVRWALPETSPSSLS*AGDLHM
Trigger: CATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGG...GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAGAGAGTGTGTTCGCTaGGCCCTTCCTGAGACCTCC +
Preference number: 2 (lower is better)
Translates to: TSDQQGALKQNASGSTFFRECVR*ALPETS
Trigger: GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCT...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CCA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTAGAGAGTGTGTTCGCTaGGCCCTTCCTGAGACCTCC +
Preference number: 2 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSRECVR*ALPETS
Trigger: GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCT...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR TCA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCCTTCAAAGGGAAACATaGGGTATTCCGATGGCCCAA +
Preference number: 2 (lower is better)
Translates to: ACTSDQQGALKQNASGSTLQRET*GIPMAQ
Trigger: TTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAG...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CCA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCCATGAGGTATTCCGATaGCCCAAGCAATCTGGTCGA +
Preference number: 2 (lower is better)
Translates to: SACTSDQQGALKQNASGSHEVFR*PKQSGR
Trigger: TCGACCAGATTGCTTGGGCCATCGGAATACCTCATG...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CCA 90 bp TGTGACCTCAGGCCAGATGGTGCTGCCTGTTCAGTATTATGGGTGTCCACAATGGGTACTCTGTTCACATaGGCATCTGCCCGAGTTGGC +
Preference number: 2 (lower is better)
Translates to: CDLRPDGAACSVLWVSTMGTLFT*ASARVG
Trigger: GCCAACTCGGGCAGATGCCCATGTGAACAGAGTACC...CATTGTGGACACCCATAATACTGAACAGGCAGCACCATCTGGCCTGAGGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCCATGAGGTATTCCGATaGCCCAAGCAATCTGGTCGA +
Preference number: 2 (lower is better)
Translates to: TSDQQGALKQNASGSTFFHEVFR*PKQSGR
Trigger: TCGACCAGATTGCTTGGGCCATCGGAATACCTCATG...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CCA 90 bp TCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAAGGGAGAGGCAGGAGGGCGGGCTCACTTTCCTGAGCTaGAGACCTCCACATGCAATG +
Preference number: 2 (lower is better)
Translates to: SFSLKVVKRGVRERQEGGLTFLS*RPPHAM
Trigger: CATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG...CCCGCCCTCCTGCCTCTCCCTTACACCCCTCTTAACGACTTTCAAACTAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR TCA 90 bp AATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGAGATGGGCTTCAAAGGGAAACATaGGGTATTCCGATGGCCCAA +
Preference number: 2 (lower is better)
Translates to: NYPRECVRWALPETSRDGLQRET*GIPMAQ
Trigger: TTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAG...CCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR TCA 90 bp CCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCCTTCAAAGGGAAACATaGGGTATTCCGATGGCCCAA +
Preference number: 2 (lower is better)
Translates to: PELETSTCNVWILICLHLLQRET*GIPMAQ
Trigger: TTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAG...GAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR GCA 90 bp GCTTTTCCTTCAGGTACTCTGTTCACATGGGCATCTGCCCGAGTTGGCTTTGCTCCTGTCTGTGACTGTTaGTATGATCAGGGCGTTTGG +
Preference number: 2 (lower is better)
Translates to: AFPSGTLFTWASARVGFAPVCDC*YDQGVW
Trigger: CCAAACGCCCTGATCATAGCAACAGTCACAGACAGG...AGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CCA 90 bp CAGGTACTCTGTTCACATGGGCATCTGCCCGAGTTGGCTTTGCTTCTCCCTTGGTCCACATGCAATGTCTaGATTCTCATCTGCTTGCAC +
Preference number: 2 (lower is better)
Translates to: QVLCSHGHLPELALLLPWSTCNV*ILICLH
Trigger: GTGCAAGCAGATGAGAATCCAGACATTGCATGTGGA...CCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CCA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTCTCACTTTCCTGAGCTaGAGACCTCCACATGCAATG +
Preference number: 2 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSLTFLS*RPPHAM
Trigger: CATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CCA 90 bp ATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCACTCACTTTCCTGAGCTaGAGACCTCCACATGCAATG +
Preference number: 2 (lower is better)
Translates to: IVVIIQESVFAGPFLRPPLTFLS*RPPHAM
Trigger: CATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG...TGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR CAA 90 bp TTCCTTCAGGTACTCTGTTCACATGGGCATCTGCCCGAGTTGGCTTaGCTTCTCCCTTGGAGACATTCAGAACTGTTTGGGATTCTGTCG +
Preference number: 2 (lower is better)
Translates to: FLQVLCSHGHLPELA*LLPWRHSELFGILS
Trigger: CGACAGAATCCCAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR TCA 90 bp CCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCCTTCAAAGGGAAACATaGGGTATTCCGATGGCCCAA +
Preference number: 2 (lower is better)
Translates to: PHFPELETSTCNVWILICLQRET*GIPMAQ
Trigger: TTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAG...GCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CCA 90 bp CTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTCATGAGGTATTCCGATaGCCCAAGCAATCTGGTCGA +
Preference number: 2 (lower is better)
Translates to: LLTFLSWRPPHAMSGFSSHEVFR*PKQSGR
Trigger: TCGACCAGATTGCTTGGGCCATCGGAATACCTCATG...AGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR CAA 90 bp TGGCTTTTCCTTCAGGTACTCTGTTCACATGGGCATCTGCCCGAGTaGGCTTTGCTTCTCCCTTGGAGACATTCAGAACTGTTTGGGATT +
Preference number: 2 (lower is better)
Translates to: WLFLQVLCSHGHLPE*ALLLPWRHSELFGI
Trigger: AATCCCAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR TCA 90 bp TCATCATTGAAATCCAGAGGCAGAGATGAAGGGCGGTCTGCTCGGAAACTGTTTGGGTGGAGTGTTTGCTaGCGCCATCGTGGTAATTAT +
Preference number: 2 (lower is better)
Translates to: SSLKSRGRDEGRSARKLFGWSVC*RHRGNY
Trigger: ATAATTACCACGATGGCGTCAGCAAACACTCCACCC...AAACAGTTTCCGAGCAGACCGCCCTTCATCTCTGCCTCTGGATTTCAATGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513978.5
3UTR-3UTR CCA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTTCCACATGCAATGTCTaGATTCTCATCTGCTTGCAC +
Preference number: 2 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSSTCNV*ILICLH
Trigger: GTGCAAGCAGATGAGAATCCAGACATTGCATGTGGA...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CCA 90 bp ATGGTGCTGCCTGTTCAGTATTATGGGTGTCCACAATGGAGGTTAGTAACCCCACTCACTTTCCTGAGCTaGAGACCTCCACATGCAATG +
Preference number: 2 (lower is better)
Translates to: MVLPVQYYGCPQWRLVTPLTFLS*RPPHAM
Trigger: CATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG...TGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CCA 90 bp TGTGACCTCAGGCCAGATGGTGCTGCCTGTTCAGTATTATGGGTGTCCACAATGTGGGATTCTGTCGCATaGAAATCTCGAGAGTTCTCA +
Preference number: 2 (lower is better)
Translates to: CDLRPDGAACSVLWVSTMWDSVA*KSREFS
Trigger: TGAGAACTCTCGAGATTTCCATGCGACAGAATCCCA...CATTGTGGACACCCATAATACTGAACAGGCAGCACCATCTGGCCTGAGGTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CCA 90 bp ATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCACAGTGGTTCCTCCGTTaGGACACTAAGAAACAACTT +
Preference number: 2 (lower is better)
Translates to: IVVIIQESVFAGPFLRPPQWFLR*DTKKQL
Trigger: AAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTG...TGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513978.5
3UTR-3UTR TCA 90 bp AAGCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCCCCTCCTCACTTTCCTaGGCTGGAGACCTCCACATG +
Preference number: 2 (lower is better)
Translates to: KQQNLPQRVKVNFYCTRTPSSLS*AGDLHM
Trigger: CATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGG...GGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR TCA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCTCATGGCTAATTCTTaGAAGGACCACATTGAGTTT +
Preference number: 2 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPLMANS*KDHIEF
Trigger: AAACTCAATGTGGTCCTTTCAAGAATTAGCCATGAG...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR TCA 90 bp CACTATGTTAGCTGTAAGCTCTTGACAGAGAACCTCCACATTGAATTGTACTTGATCCAGAGGCAGAGATaGAGGGCGGTCTGCTCGGAA +
Preference number: 2 (lower is better)
Translates to: HYVSCKLLTENLHIELYLIQRQR*RAVCSE
Trigger: TTCCGAGCAGACCGCCCTTCATCTCTGCCTCTGGAT...CAAGTACAATTCAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAACATAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR GCA 90 bp GACATTCAGAACTGTTTGGGATTCTGTCGCATGGAAATCTCGAGAGTTCTCAGAGGATTCTCATCTGCTTaGACCTCTGACCAGCAGGGT +
Preference number: 2 (lower is better)
Translates to: DIQNCLGFCRMEISRVLRGFSSA*TSDQQG
Trigger: ACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC...TCTGAGAACTCTCGAGATTTCCATGCGACAGAATCCCAAACAGTTCTGAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CCA 90 bp TTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCCATGAGGTATTCCGATaGCCCAAGCAATCTGGTCGA +
Preference number: 2 (lower is better)
Translates to: LHKNQNYFPPHFPELETSHEVFR*PKQSGR
Trigger: TCGACCAGATTGCTTGGGCCATCGGAATACCTCATG...GGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CCA 90 bp ATTCCAACAGTTTCTGACAGACCCTGTACAGGGAGACTCTTGGCTTTTCCTTCACATGAGGTATTCCGATaGCCCAAGCAATCTGGTCGA +
Preference number: 2 (lower is better)
Translates to: IPTVSDRPCTGRLLAFPSHEVFR*PKQSGR
Trigger: TCGACCAGATTGCTTGGGCCATCGGAATACCTCATG...TGAAGGAAAAGCCAAGAGTCTCCCTGTACAGGGTCTGTCAGAAACTGTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CCA 90 bp GCTGCCTGTTCAGTATTATGGGTGTCCACAATGGAGGTTAGTAACCCCAGCTGCGGTTACCGAGAAAGCTaGAATAGAGATCTTTGTGTC +
Preference number: 2 (lower is better)
Translates to: AACSVLWVSTMEVSNPSCGYRES*NRDLCV
Trigger: GACACAAAGATCTCTATTCCAGCTTTCTCGGTAACC...GCAGCTGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CCA 90 bp CCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCACATTCAGAACTGTTTaGGATTCTGTCGCATGGAAA +
Preference number: 2 (lower is better)
Translates to: PELETSTCNVWILICLHLTFRTV*DSVAWK
Trigger: TTTCCATGCGACAGAATCCCAAACAGTTCTGAATGT...GAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR CAA 90 bp GAAAGGACCACATTGAGTTTGTCAGTATATGATGTATCCTTTAGTTaGAAAGTCGTTAAGAGGGGTGTAAGGGAGAGGCAGGAGGGCGGG +
Preference number: 2 (lower is better)
Translates to: ERTTLSLSVYDVSFS*KVVKRGVRERQEGG
Trigger: CCCGCCCTCCTGCCTCTCCCTTACACCCCTCTTAACGACTTTCAAACTAAAGGATACATCATATACTGACAAACTCAATGTGGTCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR TCA 90 bp TTGAATTGTACTTGTGACCTCAGGCCAGATGGTGCTGCCTGTTCAGTATTATGGCTTCAAAGGGAAACATaGGGTATTCCGATGGCCCAA +
Preference number: 2 (lower is better)
Translates to: LNCTCDLRPDGAACSVLWLQRET*GIPMAQ
Trigger: TTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAG...CCATAATACTGAACAGGCAGCACCATCTGGCCTGAGGTCACAAGTACAATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR TCA 90 bp ACTTGGGAGGAAGGAAGTATAAGTGAGTTGGTAGTAGTAGATGGCAGGTGGAAAGGGTGGAGTGTTTGCTaGCGCCATCGTGGTAATTAT +
Preference number: 2 (lower is better)
Translates to: TWEEGSISELVVVDGRWKGWSVC*RHRGNY
Trigger: ATAATTACCACGATGGCGTCAGCAAACACTCCACCC...TTTCCACCTGCCATCTACTACTACCAACTCACTTATACTTCCTTCCTCCCAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285689.8
ENST00000515200.5
3UTR-3UTR GCA 90 bp TTCAGGAGTTTGAGAACCAGAACTGCTATATCCTTCCATGTCTTGCCTTCTTTGGGATTCTCATCTGCTTaGACCTCTGACCAGCAGGGT +
Preference number: 2 (lower is better)
Translates to: FRSLRTRTAISFHVLPSLGFSSA*TSDQQG
Trigger: ACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC...CAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CCA 90 bp GGCGGTCTGCTCGGAAACTGTTTTCAGCAGAAGATGGATTGGGACTGTTACCAAGGTTACCGAGAAAGCTaGAATAGAGATCTTTGTGTC +
Preference number: 2 (lower is better)
Translates to: GGLLGNCFQQKMDWDCYQGYRES*NRDLCV
Trigger: GACACAAAGATCTCTATTCCAGCTTTCTCGGTAACC...TTGGTAACAGTCCCAATCCATCTTCTGCTGAAAACAGTTTCCGAGCAGACCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CCA 90 bp GACAGACCCTGTACAGGGAGACTCTTGGCTTTTCCTTCAGGTACTCTGTTCACAGTTTTCAGCAGAAGATaGATTGGGACTGTTACCAAC +
Preference number: 2 (lower is better)
Translates to: DRPCTGRLLAFPSGTLFTVFSRR*IGTVTN
Trigger: GTTGGTAACAGTCCCAATCCATCTTCTGCTGAAAAC...TGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACAGGGTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR TCA 90 bp GATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTTTTCCCTCCTCACTTTCCTaGGCTGGAGACCTCCACATG +
Preference number: 2 (lower is better)
Translates to: DVTCLKQTCPLRAIYCLFPSSLS*AGDLHM
Trigger: CATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGG...AAAAAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR TCA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTTTGAAAGGACCACATTaGGTTTGTCAGTATATGATG +
Preference number: 2 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSLKGPH*VCQYMM
Trigger: CATCATATACTGACAAACTCAATGTGGTCCTTTCAA...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR TCA 90 bp CACCAGGCACAGCTGTCCACTAGGCCAACAGATACAAACGATGTAACCAATTCGCTCATGGCTAATTCTTaGAAGGACCACATTGAGTTT +
Preference number: 2 (lower is better)
Translates to: HQAQLSTRPTDTNDVTNSLMANS*KDHIEF
Trigger: AAACTCAATGTGGTCCTTTCAAGAATTAGCCATGAG...CGAATTGGTTACATCGTTTGTATCTGTTGGCCTAGTGGACAGCTGTGCCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR TCA 90 bp ATGGTGCTGCCTGTTCAGTATTATGGGTGTCCACAATGGAGGTTAGTAACCCCATGTAGAAGGTCGAGATaGTTAGTGCACAGACAACAA +
Preference number: 2 (lower is better)
Translates to: MVLPVQYYGCPQWRLVTPCRRSR*LVHRQQ
Trigger: TTGTTGTCTGTGCACTAATCATCTCGACCTTCTACA...TGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGCACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR CAA 90 bp GGATTCTGTCGCATGGAAATCTCGAGAGTTCTCAGATTCAGGAGTTaGAGAACCAGAACTGCTATATCCTTCCATGTCTTGCCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: GFCRMEISRVLRFRS*RTRTAISFHVLPSL
Trigger: CAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGATTTCCATGCGACAGAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CCA 90 bp GTTCTCAGATTCAGGAGTTTGAGAACCAGAACTGCTATATCCTTCCATGTCTTGAAAGCTTTGCTTCAGTaGTTCCTCCGTTGGGACACT +
Preference number: 2 (lower is better)
Translates to: VLRFRSLRTRTAISFHVLKALLQ*FLRWDT
Trigger: AGTGTCCCAACGGAGGAACCACTGAAGCAAAGCTTT...CAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513978.5
3UTR-3UTR CCA 90 bp CACTATGTTAGCTGTAAGCTCTTGACAGAGAACCTCCACATTGAATTGTACTTGGTACAGGGAGACTCTTaGCTTTTCCTTCAGGTACTC +
Preference number: 2 (lower is better)
Translates to: HYVSCKLLTENLHIELYLVQGDS*LFLQVL
Trigger: GAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTAC...CAAGTACAATTCAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAACATAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CCA 90 bp GGCCCAAGCAATCTGGTCGATCAGTCACCATTCTCAAGCAACTTCTGTAAGTTAATATTGGCCTTGTACTaGCTGGAAGATGAAGACTTT +
Preference number: 2 (lower is better)
Translates to: GPSNLVDQSPFSSNFCKLILALY*LEDEDF
Trigger: AAAGTCTTCATCTTCCAGCCAGTACAAGGCCAATAT...TAACTTACAGAAGTTGCTTGAGAATGGTGACTGATCGACCAGATTGCTTGGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513978.5
3UTR-3UTR TCA 90 bp AATGTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCGGGTGGAGTGTTTGCTaGCGCCATCGTGGTAATTAT +
Preference number: 2 (lower is better)
Translates to: NVDVTCLKQTCPLRAIYCGWSVC*RHRGNY
Trigger: ATAATTACCACGATGGCGTCAGCAAACACTCCACCC...GCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR TCA 90 bp AACCAGAACTGCTATATCCTTCCATGTCTTGCCTTCTTTGTTGAACCACTCCATCTGAGAATTCATCATTaGAATCCAGAGGCAGAGATG +
Preference number: 2 (lower is better)
Translates to: NQNCYILPCLAFFVEPLHLRIHH*NPEAEM
Trigger: CATCTCTGCCTCTGGATTTCAATGATGAATTCTCAG...ATGGAGTGGTTCAACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CCA 90 bp AAGCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCTCCACATGCAATGTCTaGATTCTCATCTGCTTGCAC +
Preference number: 2 (lower is better)
Translates to: KQQNLPQRVKVNFYCTRTSTCNV*ILICLH
Trigger: GTGCAAGCAGATGAGAATCCAGACATTGCATGTGGA...GGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CCA 90 bp ACTTTATGTAAGATTCCAACAGTTTCTGACAGACCCTGTACAGGGAGACTCTTGGTTTTCAGCAGAAGATaGATTGGGACTGTTACCAAC +
Preference number: 2 (lower is better)
Translates to: TLCKIPTVSDRPCTGRLLVFSRR*IGTVTN
Trigger: GTTGGTAACAGTCCCAATCCATCTTCTGCTGAAAAC...CAAGAGTCTCCCTGTACAGGGTCTGTCAGAAACTGTTGGAATCTTACATAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR TCA 90 bp AGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAGGGTGGAGTGTTTGCTaGCGCCATCGTGGTAATTAT +
Preference number: 2 (lower is better)
Translates to: SLSVYDVSFSLKVVKRGVGWSVC*RHRGNY
Trigger: ATAATTACCACGATGGCGTCAGCAAACACTCCACCC...TACACCCCTCTTAACGACTTTCAAACTAAAGGATACATCATATACTGACAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CCA 90 bp CAAAATAAGTTTAATTTAGTACTTCAGTCACATGCCTCACAGATTCTTGACCAGTCCACATGCAATGTCTaGATTCTCATCTGCTTGCAC +
Preference number: 2 (lower is better)
Translates to: QNKFNLVLQSHASQILDQSTCNV*ILICLH
Trigger: GTGCAAGCAGATGAGAATCCAGACATTGCATGTGGA...CTGGTCAAGAATCTGTGAGGCATGTGACTGAAGTACTAAATTAAACTTATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CCA 90 bp AGGACCACATTGAGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTTCCACATGCAATGTCTaGATTCTCATCTGCTTGCAC +
Preference number: 2 (lower is better)
Translates to: RTTLSLSVYDVSFSLKVVSTCNV*ILICLH
Trigger: GTGCAAGCAGATGAGAATCCAGACATTGCATGTGGA...AACGACTTTCAAACTAAAGGATACATCATATACTGACAAACTCAATGTGGTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR TCA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTTTGAAAGGACCACATTaGGTTTGTCAGTATATGATG +
Preference number: 2 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLLKGPH*VCQYMM
Trigger: CATCATATACTGACAAACTCAATGTGGTCCTTTCAA...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CAA 90 bp GGCATCTGCCCGAGTTGGCTTTGCTTCTCCCTTGGAGACATTCAGAACTGTTTGCTGCCCGAGTTGGCTTaGCTTCTCCCTTGGAGACAT +
Preference number: 3 (lower is better)
Translates to: GICPSWLCFSLGDIQNCLLPELA*LLPWRH
Trigger: ATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAG...CAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CAA 90 bp CAGGTACTCTGTTCACATGGGCATCTGCCCGAGTTGGCTTTGCTTCTCCCTTGGGTCTTGCCTTCTTTGTaGAACCACTCCATCCAGATC +
Preference number: 3 (lower is better)
Translates to: QVLCSHGHLPELALLLPWVLPSL*NHSIQI
Trigger: GATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGAC...CCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CAA 90 bp CAGGTACTCTGTTCACATGGGCATCTGCCCGAGTTGGCTTTGCTTCTCCCTTGGCATGTCTTGCCTTCTTaGTTGAACCACTCCATCCAG +
Preference number: 3 (lower is better)
Translates to: QVLCSHGHLPELALLLPWHVLPS*LNHSIQ
Trigger: CTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATG...CCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR TCA 72 bp ACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTaGCCAGCAGGGTGCACTCAAACAAAACGCCTCAGG +
Preference number: 3 (lower is better)
Translates to: TCNVWILICLHL*PAGCTQTKRLR
Trigger: CCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR GCA 72 bp GGCTTTTCCTTCAGGTACTCTGTTCACATGGGCATCTaGCCGAGTTGGCTTTGCTTCTCCCTTGGAGACATT +
Preference number: 3 (lower is better)
Translates to: GFSFRYSVHMGI*PSWLCFSLGDI
Trigger: AATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR CCA 72 bp AGACTCTTGGCTTTTCCTTCAGGTACTCTGTTCACATaGGCATCTGCCCGAGTTGGCTTTGCTTCTCCCTTG +
Preference number: 3 (lower is better)
Translates to: RLLAFPSGTLFT*ASARVGFASPL
Trigger: CAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CAA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCGATGTATCCTTTAGTTaGAAAGTCGTTAAGAGGGGT +
Preference number: 3 (lower is better)
Translates to: ACTSDQQGALKQNASGSTDVSFS*KVVKRG
Trigger: ACCCCTCTTAACGACTTTCAAACTAAAGGATACATC...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CAA 90 bp TGTACTTGTGACCTCAGGCCAGATGGTGCTGCCTGTTCAGTATTATGGGTGTCCCATGTCTTGCCTTCTTaGTTGAACCACTCCATCCAG +
Preference number: 3 (lower is better)
Translates to: CTCDLRPDGAACSVLWVSHVLPS*LNHSIQ
Trigger: CTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATG...GGACACCCATAATACTGAACAGGCAGCACCATCTGGCCTGAGGTCACAAGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CAA 90 bp CCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCCAGAGAACCTCCACATaGAATTGTACTTGTGACCTC +
Preference number: 3 (lower is better)
Translates to: PELETSTCNVWILICLHLQRTST*NCTCDL
Trigger: GAGGTCACAAGTACAATTCAATGTGGAGGTTCTCTG...GAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR GCA 72 bp AGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTaGACCTCTGACCAGCAGGGTGCACTCAAACAAAAC +
Preference number: 3 (lower is better)
Translates to: RPPHAMSGFSSA*TSDQQGALKQN
Trigger: GTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR GCA 72 bp TACTCTGTTCACATGGGCATCTGCCCGAGTTGGCTTTaGTTCTCCCTTGGAGACATTCAGAACTGTTTGGGA +
Preference number: 3 (lower is better)
Translates to: YSVHMGICPSWL*FSLGDIQNCLG
Trigger: TCCCAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR CCA 72 bp TTCAGGTACTCTGTTCACATGGGCATCTGCCCGAGTTaGCTTTGCTTCTCCCTTGGAGACATTCAGAACTGT +
Preference number: 3 (lower is better)
Translates to: FRYSVHMGICPS*LCFSLGDIQNC
Trigger: ACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR CCA 72 bp ATGGTGCTGCCTGTTCAGTATTATGGGTGTCCACAATaGAGGTTAGTAACCCCAGCTGCTCCTCCAGAGTAT +
Preference number: 3 (lower is better)
Translates to: MVLPVQYYGCPQ*RLVTPAAPPEY
Trigger: ATACTCTGGAGGAGCAGCTGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGCACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CAA 90 bp CTGTTCACATGGGCATCTGCCCGAGTTGGCTTTGCTTCTCCCTTGGAGACATTCATATCCTTCCATGTCTaGCCTTCTTTGTTGAACCAC +
Preference number: 3 (lower is better)
Translates to: LFTWASARVGFASPLETFISFHV*PSLLNH
Trigger: GTGGTTCAACAAAGAAGGCAAGACATGGAAGGATAT...GAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CAA 90 bp GGTACTCTGTTCACATGGGCATCTGCCCGAGTTGGCTTTGCTTCTCCCTTGGAGGTCTTAGGGTCATTTTaGCTTTCTGTTTTACAGTCG +
Preference number: 3 (lower is better)
Translates to: GTLFTWASARVGFASPLEVLGSF*LSVLQS
Trigger: CGACTGTAAAACAGAAAGCAAAAATGACCCTAAGAC...CTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513978.5
3UTR-3UTR CAA 90 bp GGAGTGTTTGCTGACGCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGAAGTGCATATTGGCCTaGTACTGGCTGGAAGATGAA +
Preference number: 3 (lower is better)
Translates to: GVFADAIVVIIQESVFAGKCILA*YWLEDE
Trigger: TTCATCTTCCAGCCAGTACAAGGCCAATATGCACTT...CCCAGCGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513978.5
3UTR CCA 72 bp CAACAGTTTCTGACAGACCCTGTACAGGGAGACTCTTaGCTTTTCCTTCAGGTACTCTGTTCACATGGGCAT +
Preference number: 3 (lower is better)
Translates to: QQFLTDPVQGDS*LFLQVLCSHGH
Trigger: ATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACAGGGTCTGTCAGAAACTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CAA 90 bp CCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCGATGTATCCTTTAGTTaGAAAGTCGTTAAGAGGGGT +
Preference number: 3 (lower is better)
Translates to: PELETSTCNVWILICLHLDVSFS*KVVKRG
Trigger: ACCCCTCTTAACGACTTTCAAACTAAAGGATACATC...GAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CAA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTGTAGATGTTACTTGTTaGAAGCAAACCTGTCCACTT +
Preference number: 3 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPVDVTC*KQTCPL
Trigger: AAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CAA 90 bp ATTCCAACAGTTTCTGACAGACCCTGTACAGGGAGACTCTTGGCTTTTCCTTCAAGCACAGGTAAAGCTTaGCTTCAGTGGTTCCTCCGT +
Preference number: 3 (lower is better)
Translates to: IPTVSDRPCTGRLLAFPSSTGKA*LQWFLR
Trigger: ACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGCT...TGAAGGAAAAGCCAAGAGTCTCCCTGTACAGGGTCTGTCAGAAACTGTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513978.5
3UTR-3UTR CAA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTATACAGACATCCTGCTaGAAAACTACTAACATAGTC +
Preference number: 3 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPIQTSC*KTTNIV
Trigger: GACTATGTTAGTAGTTTTCAAGCAGGATGTCTGTAT...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CAA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTATACAGACATCCTGCTaGAAAACTACTAACATAGTC +
Preference number: 3 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSIQTSC*KTTNIV
Trigger: GACTATGTTAGTAGTTTTCAAGCAGGATGTCTGTAT...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR TCA 72 bp GCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTaGGCTGGAGACCTCCACATGCAATGTCTGGATTCT +
Preference number: 3 (lower is better)
Translates to: AQEPKLFPSSLS*AGDLHMQCLDS
Trigger: AGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CAA 90 bp TCTCCCTTGGAGACATTCAGAACTGTTTGGGATTCTGTCGCATGGAAATCTCGAATATCCTTCCATGTCTaGCCTTCTTTGTTGAACCAC +
Preference number: 3 (lower is better)
Translates to: SPLETFRTVWDSVAWKSRISFHV*PSLLNH
Trigger: GTGGTTCAACAAAGAAGGCAAGACATGGAAGGATAT...TCGAGATTTCCATGCGACAGAATCCCAAACAGTTCTGAATGTCTCCAAGGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR TCA 72 bp GCATGGAAATCTCGAGAGTTCTCAGATTCAGGAGTTTaGGAACCAGAACTGCTATATCCTTCCATGTCTTGC +
Preference number: 3 (lower is better)
Translates to: AWKSREFSDSGV*EPELLYPSMSC
Trigger: GCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGATTTCCATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR CCA 72 bp AGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTaGAGACCTCCACATGCAATGTCTGGATTCTCATCT +
Preference number: 3 (lower is better)
Translates to: RTKIISLLTFLS*RPPHAMSGFSS
Trigger: AGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR CCA 72 bp AGCACAGGTAAAGCTTTGCTTCAGTGGTTCCTCCGTTaGGACACTAAGAAACAACTTGTGAAAGTGCATATT +
Preference number: 3 (lower is better)
Translates to: STGKALLQWFLR*DTKKQLVKVHI
Trigger: AATATGCACTTTCACAAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513978.5
3UTR TCA 72 bp GAACTGCTATATCCTTCCATGTCTTGCCTTCTTTGTTaGACCACTCCATCCAGATCTGAGAATTCATCATTG +
Preference number: 3 (lower is better)
Translates to: ELLYPSMSCLLC*TTPSRSENSSL
Trigger: CAATGATGAATTCTCAGATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR GCA 72 bp GAGAGTTCTCAGATTCAGGAGTTTGAGAACCAGAACTaGTATATCCTTCCATGTCTTGCCTTCTTTGTTGAA +
Preference number: 3 (lower is better)
Translates to: ESSQIQEFENQN*YILPCLAFFVE
Trigger: TTCAACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR-3UTR CAA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTAGGACCACATTGAGTTaGTCAGTATATGATGTATCC +
Preference number: 3 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLRTTLS*SVYDVS
Trigger: GGATACATCATATACTGACAAACTCAATGTGGTCCT...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR-3UTR CAA 90 bp AATGTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCAGGACCACATTGAGTTaGTCAGTATATGATGTATCC +
Preference number: 3 (lower is better)
Translates to: NVDVTCLKQTCPLRAIYCRTTLS*SVYDVS
Trigger: GGATACATCATATACTGACAAACTCAATGTGGTCCT...GCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR TCA 72 bp AGCATAGTTAAGTCTTGGTTAAAGGAATTTACGAACTaGCAAAACACAGTGTTAGCAGGGTGTTTCAACCAA +
Preference number: 3 (lower is better)
Translates to: SIVKSWLKEFTN*QNTVLAGCFNQ
Trigger: TTGGTTGAAACACCCTGCTAACACTGTGTTTTGTCAGTTCGTAAATTCCTTTAACCAAGACTTAACTATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285689.8
ENST00000515200.5
3UTR-3UTR CAA 90 bp AATGTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTGAAAGGACCACATaGAGTTTGTCAGTATATGAT +
Preference number: 3 (lower is better)
Translates to: NVDVTCLKQTCPLRAIYCLERTT*SLSVYD
Trigger: ATCATATACTGACAAACTCAATGTGGTCCTTTCAAG...GCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTACATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR TCA 72 bp ATCTTTTCTAATTTCACTATGTTAGCTGTAAGCTCTTaGCAGAGAACCTCCACATTGAATTGTACTTGTGAC +
Preference number: 3 (lower is better)
Translates to: IFSNFTMLAVSS*QRTSTLNCTCD
Trigger: GTCACAAGTACAATTCAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAACATAGTGAAATTAGAAAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR GCA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTCGCCGTGCCCTCCCCTaGACCCTCCGCCCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPRRALP*TLRPAH
Trigger: ATGCGCTGGGCGGAGGGTGCAGGGGAGGGCACGGCG...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GGATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCCGCCGTGCCCTCCCCTaGACCCTCCGCCCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: GFSSACTSDQQGALKQNARRALP*TLRPAH
Trigger: ATGCGCTGGGCGGAGGGTGCAGGGGAGGGCACGGCG...GGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCAAGCAAGCGGCGCCGTaGCCTCCCCTGCACCCTCCG +
Preference number: 4 (lower is better)
Translates to: SACTSDQQGALKQNASGSKQAAP*PPLHPP
Trigger: CGGAGGGTGCAGGGGAGGGCACGGCGCCGCTTGCTT...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp TGTGACCTCAGGCCAGATGGTGCTGCCTGTTCAGTATTATGGGTGTCCACAATGCGCCGTGCCCTCCCCTaGACCCTCCGCCCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: CDLRPDGAACSVLWVSTMRRALP*TLRPAH
Trigger: ATGCGCTGGGCGGAGGGTGCAGGGGAGGGCACGGCG...CATTGTGGACACCCATAATACTGAACAGGCAGCACCATCTGGCCTGAGGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR GCA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGAAGCAAGCGGCGCCGTaGCCTCCCCTGCACCCTCCG +
Preference number: 4 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQKQAAP*PPLHPP
Trigger: CGGAGGGTGCAGGGGAGGGCACGGCGCCGCTTGCTT...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCAAGCAAGCGGCGCCGTaGCCTCCCCTGCACCCTCCG +
Preference number: 4 (lower is better)
Translates to: PHFPELETSTCNVWILICKQAAP*PPLHPP
Trigger: CGGAGGGTGCAGGGGAGGGCACGGCGCCGCTTGCTT...GCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTAGACTTCCGCGCGCCTaGCTCTGCCCCGGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSRLPRA*LCPGSS
Trigger: GGACGAGCCGGGGCAGAGCCAGGCGCGCGGAAGTCT...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GGATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCGCTTCTAGGTCCGGGTaGGCAGGCCAAGCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: GFSSACTSDQQGALKQNAASRSG*AGQASG
Trigger: GCCGCTTGCTTGGCCTGCGCACCCGGACCTAGAAGC...GGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCGATGGGGTAGGGGATTaGGCTGTTGGCGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: ACTSDQQGALKQNASGSTDGVGD*AVGDLQ
Trigger: CTGCAGGTCGCCAACAGCCCAATCCCCTACCCCATC...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCGTCCGCCTCCACAGATaGGGTAGGGGATTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ACTSDQQGALKQNASGSTVRLHR*GRGLGC
Trigger: ACAGCCCAATCCCCTACCCCATCTGTGGAGGCGGAC...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTCGGAGCGGGCGCGATTaGTCCGACCCACTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPRSGRD*SDPLWK
Trigger: TTTCCACAGTGGGTCGGACCAATCGCGCCCGCTCCG...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCCGGAGCGGGCGCGATTaGTCCGACCCACTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SACTSDQQGALKQNASGSRSGRD*SDPLWK
Trigger: TTTCCACAGTGGGTCGGACCAATCGCGCCCGCTCCG...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GGATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCGCTGGGCCCTTCCTaGGACCTCCAGAGATGGGTC +
Preference number: 4 (lower is better)
Translates to: GFSSACTSDQQGALKQNASLGPS*DLQRWV
Trigger: GACCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGA...GGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp AATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGAGATGGGTCGCTGGGCCCTTCCTaGGACCTCCAGAGATGGGTC +
Preference number: 4 (lower is better)
Translates to: NYPRECVRWALPETSRDGSLGPS*DLQRWV
Trigger: GACCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGA...CCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACGCCGTGCCCTCCCCTaGACCCTCCGCCCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPRRALP*TLRPAH
Trigger: ATGCGCTGGGCGGAGGGTGCAGGGGAGGGCACGGCG...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GGCATCTGCCCGAGTTGGCTTTGCTTCTCCCTTGGAGACATTCAGAACTGTTTGGCTTCTAGGTCCGGGTaGGCAGGCCAAGCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: GICPSWLCFSLGDIQNCLASRSG*AGQASG
Trigger: GCCGCTTGCTTGGCCTGCGCACCCGGACCTAGAAGC...CAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp CTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACATCGGGGCCGTGTCTaGAGGGCACCTTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: LLAPLTSRVHSNKTPQEAHRGRV*RAPSDF
Trigger: GAAGTCTGAAGGTGCCCTCCAGACACGGCCCCGATG...TGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCGATGGGGTAGGGGATTaGGCTGTTGGCGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: SACTSDQQGALKQNASGSDGVGD*AVGDLQ
Trigger: CTGCAGGTCGCCAACAGCCCAATCCCCTACCCCATC...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCCCCTCCTCACTTTCCTaGGCTGGAGACCTCCACATG +
Preference number: 4 (lower is better)
Translates to: SACTSDQQGALKQNASGSPSSLS*AGDLHM
Trigger: CATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGG...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCCTCCTCACTTTCCTaGGCTGGAGACCTCCACATG +
Preference number: 4 (lower is better)
Translates to: LLAPLTSRVHSNKTPQEAPSSLS*AGDLHM
Trigger: CATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGG...TGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GGAGTGTTTGCTGACGCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGTCGCTGGGCCCTTCCTaGGACCTCCAGAGATGGGTC +
Preference number: 4 (lower is better)
Translates to: GVFADAIVVIIQESVFAGSLGPS*DLQRWV
Trigger: GACCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGA...CCCAGCGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTCGCTGGGCCCTTCCTaGGACCTCCAGAGATGGGTC +
Preference number: 4 (lower is better)
Translates to: PPHFPELETSTCNVWILISLGPS*DLQRWV
Trigger: GACCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGA...GATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCAAGGGTCGAAGCGAAGTaGCAGCCTCTTTCCCCAACC +
Preference number: 4 (lower is better)
Translates to: LLAPLTSRVHSNKTPQEARVEAK*QPLSPT
Trigger: GGTTGGGGAAAGAGGCTGTCACTTCGCTTCGACCCT...TGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GACATTCAGAACTGTTTGGGATTCTGTCGCATGGAAATCTCGAGAGTTCTCAGACGCCGTGCCCTCCCCTaGACCCTCCGCCCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: DIQNCLGFCRMEISRVLRRRALP*TLRPAH
Trigger: ATGCGCTGGGCGGAGGGTGCAGGGGAGGGCACGGCG...TCTGAGAACTCTCGAGATTTCCATGCGACAGAATCCCAAACAGTTCTGAATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR GCA 90 bp TTGAATTGTACTTGTGACCTCAGGCCAGATGGTGCTGCCTGTTCAGTATTATGGAAGCAAGCGGCGCCGTaGCCTCCCCTGCACCCTCCG +
Preference number: 4 (lower is better)
Translates to: LNCTCDLRPDGAACSVLWKQAAP*PPLHPP
Trigger: CGGAGGGTGCAGGGGAGGGCACGGCGCCGCTTGCTT...CCATAATACTGAACAGGCAGCACCATCTGGCCTGAGGTCACAAGTACAATTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR GCA 90 bp AGACCCTGTACAGGGAGACTCTTGGCTTTTCCTTCAGGTACTCTGTTCACATGGGCTTCTAGGTCCGGGTaGGCAGGCCAAGCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: RPCTGRLLAFPSGTLFTWASRSG*AGQASG
Trigger: GCCGCTTGCTTGGCCTGCGCACCCGGACCTAGAAGC...CCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACAGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp TTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCAGACTTCCGCGCGCCTaGCTCTGCCCCGGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: LHKNQNYFPPHFPELETSRLPRA*LCPGSS
Trigger: GGACGAGCCGGGGCAGAGCCAGGCGCGCGGAAGTCT...GGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp ATTCCAACAGTTTCTGACAGACCCTGTACAGGGAGACTCTTGGCTTTTCCTTCAAGACTTCCGCGCGCCTaGCTCTGCCCCGGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: IPTVSDRPCTGRLLAFPSRLPRA*LCPGSS
Trigger: GGACGAGCCGGGGCAGAGCCAGGCGCGCGGAAGTCT...TGAAGGAAAAGCCAAGAGTCTCCCTGTACAGGGTCTGTCAGAAACTGTTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGCATCGGGGCCGTGTCTaGAGGGCACCTTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQHRGRV*RAPSDF
Trigger: GAAGTCTGAAGGTGCCCTCCAGACACGGCCCCGATG...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCAGGGGATTGGGCTGTTaGCGACCTGCAGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ACTSDQQGALKQNASGSTRGLGC*RPAGFL
Trigger: AAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCT...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCGATGGGGTAGGGGATTaGGCTGTTGGCGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: TSDQQGALKQNASGSTFFDGVGD*AVGDLQ
Trigger: CTGCAGGTCGCCAACAGCCCAATCCCCTACCCCATC...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GGAGACTCTTGGCTTTTCCTTCAGGTACTCTGTTCACATGGGCATCTGCCCGAGGATGGGGTAGGGGATTaGGCTGTTGGCGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: GDSWLFLQVLCSHGHLPEDGVGD*AVGDLQ
Trigger: CTGCAGGTCGCCAACAGCCCAATCCCCTACCCCATC...CTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp TCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAGATGGGGTAGGGGATTaGGCTGTTGGCGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: SSACTSDQQGALKQNASGDGVGD*AVGDLQ
Trigger: CTGCAGGTCGCCAACAGCCCAATCCCCTACCCCATC...TCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTGTCCGCCTCCACAGATaGGGTAGGGGATTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPVRLHR*GRGLGC
Trigger: ACAGCCCAATCCCCTACCCCATCTGTGGAGGCGGAC...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTTGGTCCGACCCACTGTaGAAAAGCCGAGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPWSDPL*KSREGG
Trigger: CCCTCCCTCTCGGCTTTTCCACAGTGGGTCGGACCA...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAAGGGAGAGGCAGGAGGGCGGGTGGTCCGACCCACTGTaGAAAAGCCGAGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SFSLKVVKRGVRERQEGGWSDPL*KSREGG
Trigger: CCCTCCCTCTCGGCTTTTCCACAGTGGGTCGGACCA...CCCGCCCTCCTGCCTCTCCCTTACACCCCTCTTAACGACTTTCAAACTAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GGATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTGGTCCGACCCACTGTaGAAAAGCCGAGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GFSSACTSDQQGALKQNAWSDPL*KSREGG
Trigger: CCCTCCCTCTCGGCTTTTCCACAGTGGGTCGGACCA...GGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GGATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCCAGGTCCGGACCCACTaGCTTCACTTCTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: GFSSACTSDQQGALKQNAQVRTH*LHFSPV
Trigger: CACGGGAGAGAAGTGAAGCCAGTGGGTCCGGACCTG...GGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR TCA 90 bp TCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAATCCAGAGGCAGAGATaGAGGGCGGTCTGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: SSACTSDQQGALKQNASGIQRQR*RAVCSE
Trigger: TTCCGAGCAGACCGCCCTTCATCTCTGCCTCTGGAT...TCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCCCCTCCTCACTTTCCTaGGCTGGAGACCTCCACATG +
Preference number: 4 (lower is better)
Translates to: PELETSTCNVWILICLHLPSSLS*AGDLHM
Trigger: CATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGG...GAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAAGGGAGAGGCAGGAGGGCGGGAGGGTCGAAGCGAAGTaGCAGCCTCTTTCCCCAACC +
Preference number: 4 (lower is better)
Translates to: SFSLKVVKRGVRERQEGGRVEAK*QPLSPT
Trigger: GGTTGGGGAAAGAGGCTGTCACTTCGCTTCGACCCT...CCCGCCCTCCTGCCTCTCCCTTACACCCCTCTTAACGACTTTCAAACTAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CTCAGATTCAGGAGTTTGAGAACCAGAACTGCTATATCCTTCCATGTCTTGCCTAAGCAAGCGGCGCCGTaGCCTCCCCTGCACCCTCCG +
Preference number: 4 (lower is better)
Translates to: LRFRSLRTRTAISFHVLPKQAAP*PPLHPP
Trigger: CGGAGGGTGCAGGGGAGGGCACGGCGCCGCTTGCTT...AGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR GCA 90 bp AATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGAGATGGGGGGCTGAGCCAAGTTTaGTCTCCCTCTTCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: NYPRECVRWALPETSRDGGLSQV*SPSSRA
Trigger: TGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCC...CCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCGGGCTGAGCCAAGTTTaGTCTCCCTCTTCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: TSDQQGALKQNASGSTFFGLSQV*SPSSRA
Trigger: TGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCC...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCGGATTCTCATCTGCTTaGACCTCTGACCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: ACTSDQQGALKQNASGSTGFSSA*TSDQQG
Trigger: ACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGCAGACTGTGTGGACTTaGTGGCTCCCAGGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQQTVWT*WLPGLC
Trigger: GCACAGACCTGGGAGCCAGCAAGTCCACACAGTCTG...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511134.1
CDS-3UTR GCA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTCTTTCAGCGTCTaGTCAGAGGGATGGCACCAG +
Preference number: 4 (lower is better)
Translates to: ACTSDQQGALKQNASGSTFSFSV*SEGWHQ
Trigger: CTGGTGCCATCCCTCTGAGCAGACGCTGAAAGAGAA...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR CCA 90 bp AATATGTACCTGTCTGTGACTGTTGCTATGATCAGGGCGTTTGGCACTAGAAGAAGACTTCCGCGCGCCTaGCTCTGCCCCGGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: NMYLSVTVAMIRAFGTRRRLPRA*LCPGSS
Trigger: GGACGAGCCGGGGCAGAGCCAGGCGCGCGGAAGTCT...TCTTCTAGTGCCAAACGCCCTGATCATAGCAACAGTCACAGACAGGTACATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp GCTGCCTGTTCAGTATTATGGGTGTCCACAATGGAGGTTAGTAACCCCAGCTGCCATCGGGGCCGTGTCTaGAGGGCACCTTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: AACSVLWVSTMEVSNPSCHRGRV*RAPSDF
Trigger: GAAGTCTGAAGGTGCCCTCCAGACACGGCCCCGATG...GCAGCTGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp GGAGTGTTTGCTGACGCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCATCGGGGCCGTGTCTaGAGGGCACCTTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: GVFADAIVVIIQESVFAGHRGRV*RAPSDF
Trigger: GAAGTCTGAAGGTGCCCTCCAGACACGGCCCCGATG...CCCAGCGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCAAGGGGATTGGGCTGTTaGCGACCTGCAGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LLAPLTSRVHSNKTPQEARGLGC*RPAGFL
Trigger: AAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCT...TGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCGATGGGGTAGGGGATTaGGCTGTTGGCGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: PPHFPELETSTCNVWILIDGVGD*AVGDLQ
Trigger: CTGCAGGTCGCCAACAGCCCAATCCCCTACCCCATC...GATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GGAGTGTTTGCTGACGCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGGTCCGCCTCCACAGATaGGGTAGGGGATTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GVFADAIVVIIQESVFAGVRLHR*GRGLGC
Trigger: ACAGCCCAATCCCCTACCCCATCTGTGGAGGCGGAC...CCCAGCGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCGGCATCTGCCCGAGTTaGCTTTGCTTCTCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SACTSDQQGALKQNASGSGICPS*LCFSLG
Trigger: TCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCC...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCGGTACTCTGTTCACATaGGCATCTGCCCGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: CTSDQQGALKQNASGSTFGTLFT*ASARVG
Trigger: GCCAACTCGGGCAGATGCCCATGTGAACAGAGTACC...GAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCAGGTACTCTGTTCACATaGGCATCTGCCCGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: LLAPLTSRVHSNKTPQEAGTLFT*ASARVG
Trigger: GCCAACTCGGGCAGATGCCCATGTGAACAGAGTACC...TGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAAGGGAGAGGCAGGAGGGCGGGAGAGAGTGTGTTCGCTaGGCCCTTCCTGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: SFSLKVVKRGVRERQEGGRECVR*ALPETS
Trigger: GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCT...CCCGCCCTCCTGCCTCTCCCTTACACCCCTCTTAACGACTTTCAAACTAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAAATCCAGAGGCAGAGATaGAGGGCGGTCTGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: PAGCTQTKRLRKHLLQREIQRQR*RAVCSE
Trigger: TTCCGAGCAGACCGCCCTTCATCTCTGCCTCTGGAT...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTATCCAGAGGCAGAGATaGAGGGCGGTCTGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSIQRQR*RAVCSE
Trigger: TTCCGAGCAGACCGCCCTTCATCTCTGCCTCTGGAT...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GGAGTGTTTGCTGACGCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTCCTCACTTTCCTaGGCTGGAGACCTCCACATG +
Preference number: 4 (lower is better)
Translates to: GVFADAIVVIIQESVFAGPSSLS*AGDLHM
Trigger: CATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGG...CCCAGCGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp ATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCACCCTCCTCACTTTCCTaGGCTGGAGACCTCCACATG +
Preference number: 4 (lower is better)
Translates to: IVVIIQESVFAGPFLRPPPSSLS*AGDLHM
Trigger: CATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGG...TGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTGGGCTGTTGGCGACCTaGAGGCTTTCTTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPGLLAT*RLSFSP
Trigger: AGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCC...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTGTTCACATGGGCATCTaGCCGAGTTGGCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPVHMGI*PSWLCF
Trigger: GAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAAC...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCAGTTCACATGGGCATCTaGCCGAGTTGGCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLAPLTSRVHSNKTPQEAVHMGI*PSWLCF
Trigger: GAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAAC...TGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCTCAGCCTCTGAGTaGGCTGAGCCAAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: CTSDQQGALKQNASGSTFFSASE*AEPSLL
Trigger: GAGCAAACTTGGCTCAGCCCACTCAGAGGCTGAGAA...GAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAGGGGATTGGGCTGTTaGCGACCTGCAGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TSDQQGALKQNASGSTFFRGLGC*RPAGFL
Trigger: AAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCT...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GGATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCAGGGGATTGGGCTGTTaGCGACCTGCAGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GFSSACTSDQQGALKQNARGLGC*RPAGFL
Trigger: AAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCT...GGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCGATGGGGTAGGGGATTaGGCTGTTGGCGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACDGVGD*AVGDLQ
Trigger: CTGCAGGTCGCCAACAGCCCAATCCCCTACCCCATC...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCGTCCGCCTCCACAGATaGGGTAGGGGATTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACVRLHR*GRGLGC
Trigger: ACAGCCCAATCCCCTACCCCATCTGTGGAGGCGGAC...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCGATTTTCTTCTGGTCTaGGGAGTCCGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: CTSDQQGALKQNASGSTFDFLLV*GVRLHR
Trigger: TCTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATC...GAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCGGTACTCTGTTCACATaGGCATCTGCCCGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: TSDQQGALKQNASGSTFFGTLFT*ASARVG
Trigger: GCCAACTCGGGCAGATGCCCATGTGAACAGAGTACC...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCCTCACTTTCCTGAGCTaGAGACCTCCACATGCAATG +
Preference number: 4 (lower is better)
Translates to: ACTSDQQGALKQNASGSTLTFLS*RPPHAM
Trigger: CATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AGCACCTTCTTCAAAGGGAAACATGAGGTATTCCGATGGCCCAAGCAATCTGGTCGGAGCGGGCGCGATTaGTCCGACCCACTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: STFFKGKHEVFRWPKQSGRSGRD*SDPLWK
Trigger: TTTCCACAGTGGGTCGGACCAATCGCGCCCGCTCCG...ACCAGATTGCTTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAGAAGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTGATTCCAACAGTTTCTaGCAGACCCTGTACAGGGAG +
Preference number: 4 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPDSNSF*QTLYRE
Trigger: CTCCCTGTACAGGGTCTGTCAGAAACTGTTGGAATC...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GGCGGTCTGCTCGGAAACTGTTTTCAGCAGAAGATGGATTGGGACTGTTACCAACCCTCCTCACTTTCCTaGGCTGGAGACCTCCACATG +
Preference number: 4 (lower is better)
Translates to: GGLLGNCFQQKMDWDCYQPSSLS*AGDLHM
Trigger: CATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGG...TTGGTAACAGTCCCAATCCATCTTCTGCTGAAAACAGTTTCCGAGCAGACCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR TCA 90 bp TTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCTCGCTGGGCCCTTCCTaGGACCTCCAGAGATGGGTC +
Preference number: 4 (lower is better)
Translates to: LHKNQNYFPPHFPELETSSLGPS*DLQRWV
Trigger: GACCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGA...GGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTACCATTCTCAGCCTCTaGGAGTTCCAGGTCCGGACC +
Preference number: 4 (lower is better)
Translates to: LTFLSWRPPHAMSGFSSATILSL*EFQVRT
Trigger: GGTCCGGACCTGGAACTCTCAGAGGCTGAGAATGGT...AGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR GCA 90 bp AACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGCTTCTAGGTCCGGGTaGGCAGGCCAAGCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: NQNYFPPHFPELETSTCNASRSG*AGQASG
Trigger: GCCGCTTGCTTGGCCTGCGCACCCGGACCTAGAAGC...ATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGGGCTGAGCCAAGTTTaGTCTCCCTCTTCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: LLTFLSWRPPHAMSGFSSGLSQV*SPSSRA
Trigger: TGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCC...AGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp TCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAGGGCTGTTGGCGACCTaGAGGCTTTCTTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SSACTSDQQGALKQNASGGLLAT*RLSFSP
Trigger: AGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCC...TCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCGGGCTGTTGGCGACCTaGAGGCTTTCTTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TSDQQGALKQNASGSTFFGLLAT*RLSFSP
Trigger: AGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCC...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCCCTGTCTGTGACTGTTaGTATGATCAGGGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: SACTSDQQGALKQNASGSPVCDC*YDQGVW
Trigger: CCAAACGCCCTGATCATAGCAACAGTCACAGACAGG...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTGTCTGTGACTGTTaGTATGATCAGGGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: LLAPLTSRVHSNKTPQEAPVCDC*YDQGVW
Trigger: CCAAACGCCCTGATCATAGCAACAGTCACAGACAGG...TGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTGCCCGAGTTGGCTTTaGTTCTCCCTTGGAGACATT +
Preference number: 4 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPCPSWL*FSLGDI
Trigger: AATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCA...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCGTTCACATGGGCATCTaGCCGAGTTGGCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PELETSTCNVWILICLHLVHMGI*PSWLCF
Trigger: GAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAAC...GAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GGATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCGGATTCTCATCTGCTTaGACCTCTGACCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GFSSACTSDQQGALKQNAGFSSA*TSDQQG
Trigger: ACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC...GGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp TCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAAGGGAGAGGCAGGAGGGCGGGGGATTCTCATCTGCTTaGACCTCTGACCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SFSLKVVKRGVRERQEGGGFSSA*TSDQQG
Trigger: ACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC...CCCGCCCTCCTGCCTCTCCCTTACACCCCTCTTAACGACTTTCAAACTAAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GGAGACTCTTGGCTTTTCCTTCAGGTACTCTGTTCACATGGGCATCTGCCCGAGTTCTCAGCCTCTGAGTaGGCTGAGCCAAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: GDSWLFLQVLCSHGHLPEFSASE*AEPSLL
Trigger: GAGCAAACTTGGCTCAGCCCACTCAGAGGCTGAGAA...CTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAAAGGGGATTGGGCTGTTaGCGACCTGCAGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PAGCTQTKRLRKHLLQRERGLGC*RPAGFL
Trigger: AAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCT...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTAGGGGATTGGGCTGTTaGCGACCTGCAGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: DSHLLAPLTSRVHSNKTPRGLGC*RPAGFL
Trigger: AAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCT...AGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCTTTGCTTCTCCCTTGGAGACATTCAGAACTGTTTGGGATTCTGTCGCATGGAGTCCGCCTCCACAGATaGGGTAGGGGATTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ALLLPWRHSELFGILSHGVRLHR*GRGLGC
Trigger: ACAGCCCAATCCCCTACCCCATCTGTGGAGGCGGAC...TCCATGCGACAGAATCCCAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp ATGGTGCTGCCTGTTCAGTATTATGGGTGTCCACAATGGAGGTTAGTAACCCCAGTCCGCCTCCACAGATaGGGTAGGGGATTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: MVLPVQYYGCPQWRLVTPVRLHR*GRGLGC
Trigger: ACAGCCCAATCCCCTACCCCATCTGTGGAGGCGGAC...TGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGCACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCGATTTTCTTCTGGTCTaGGGAGTCCGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: TSDQQGALKQNASGSTFFDFLLV*GVRLHR
Trigger: TCTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATC...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCGATTTTCTTCTGGTCTaGGGAGTCCGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: PELETSTCNVWILICLHLDFLLV*GVRLHR
Trigger: TCTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATC...GAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCCTAATGATTTTCTTCTaGTCTGGGGAGTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SACTSDQQGALKQNASGSLMIFF*SGESAS
Trigger: GGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAG...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp ATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGGTACTCTGTTCACATaGGCATCTGCCCGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: IVVIIQESVFAGPFLRPPGTLFT*ASARVG
Trigger: GCCAACTCGGGCAGATGCCCATGTGAACAGAGTACC...TGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCTGCCTGTTCAGTATTATGGGTGTCCACAATGGAGGTTAGTAACCCCAGCTGCGGTACTCTGTTCACATaGGCATCTGCCCGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: AACSVLWVSTMEVSNPSCGTLFT*ASARVG
Trigger: GCCAACTCGGGCAGATGCCCATGTGAACAGAGTACC...GCAGCTGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp CCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCGGTACTCTGTTCACATaGGCATCTGCCCGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: PPHFPELETSTCNVWILIGTLFT*ASARVG
Trigger: GCCAACTCGGGCAGATGCCCATGTGAACAGAGTACC...GATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCATGGCCCAAGCAATCTaGTCGATCAGTCACCATTCT +
Preference number: 4 (lower is better)
Translates to: ACTSDQQGALKQNASGSTMAQAI*SISHHS
Trigger: AGAATGGTGACTGATCGACCAGATTGCTTGGGCCAT...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCGATTCCAACAGTTTCTaGCAGACCCTGTACAGGGAG +
Preference number: 4 (lower is better)
Translates to: PELETSTCNVWILICLHLDSNSF*QTLYRE
Trigger: CTCCCTGTACAGGGTCTGTCAGAAACTGTTGGAATC...GAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp AATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGAGATGGGGATTCCAACAGTTTCTaGCAGACCCTGTACAGGGAG +
Preference number: 4 (lower is better)
Translates to: NYPRECVRWALPETSRDGDSNSF*QTLYRE
Trigger: CTCCCTGTACAGGGTCTGTCAGAAACTGTTGGAATC...CCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAGATTCCAACAGTTTCTaGCAGACCCTGTACAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSACTSDQQGALKQNASGDSNSF*QTLYRE
Trigger: CTCCCTGTACAGGGTCTGTCAGAAACTGTTGGAATC...TCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCCTTCAAAGGGAAACATaGGGTATTCCGATGGCCCAA +
Preference number: 4 (lower is better)
Translates to: CTSDQQGALKQNASGSTFLQRET*GIPMAQ
Trigger: TTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAG...GAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp AACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATTCGCTGGGCCCTTCCTaGGACCTCCAGAGATGGGTC +
Preference number: 4 (lower is better)
Translates to: NQNYFPPHFPELETSTCNSLGPS*DLQRWV
Trigger: GACCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGA...ATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGGGTGGAGTGTTTGCTaGCGCCATCGTGGTAATTAT +
Preference number: 4 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQGWSVC*RHRGNY
Trigger: ATAATTACCACGATGGCGTCAGCAAACACTCCACCC...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAGGGTGGAGTGTTTGCTaGCGCCATCGTGGTAATTAT +
Preference number: 4 (lower is better)
Translates to: SSACTSDQQGALKQNASGGWSVC*RHRGNY
Trigger: ATAATTACCACGATGGCGTCAGCAAACACTCCACCC...TCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCTCTCAGCCTCTGAGCTaGAGAAGAAAGGAAACCGCT +
Preference number: 4 (lower is better)
Translates to: TSDQQGALKQNASGSTFFSQPLS*RRKETA
Trigger: AGCGGTTTCCTTTCTTCTTCAGCTCAGAGGCTGAGA...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511134.1
CDS-3UTR GCA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTAAGCAAGCGGCGCCGTaGCCTCCCCTGCACCCTCCG +
Preference number: 4 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLKQAAP*PPLHPP
Trigger: CGGAGGGTGCAGGGGAGGGCACGGCGCCGCTTGCTT...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCGGGCTGTTGGCGACCTaGAGGCTTTCTTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PHFPELETSTCNVWILICGLLAT*RLSFSP
Trigger: AGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCC...GCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GGATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCCCTGTCTGTGACTGTTaGTATGATCAGGGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: GFSSACTSDQQGALKQNAPVCDC*YDQGVW
Trigger: CCAAACGCCCTGATCATAGCAACAGTCACAGACAGG...GGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCTGCCCGAGTTGGCTTTaGTTCTCCCTTGGAGACATT +
Preference number: 4 (lower is better)
Translates to: HRGNYPRECVRWALPETSCPSWL*FSLGDI
Trigger: AATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCA...GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCTGCCCGAGTTGGCTTTaGTTCTCCCTTGGAGACATT +
Preference number: 4 (lower is better)
Translates to: TSDQQGALKQNASGSTFFCPSWL*FSLGDI
Trigger: AATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCA...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GGAGTGTTTGCTGACGCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGGTTCACATGGGCATCTaGCCGAGTTGGCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: GVFADAIVVIIQESVFAGVHMGI*PSWLCF
Trigger: GAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAAC...CCCAGCGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCGTTCACATGGGCATCTaGCCGAGTTGGCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PPHFPELETSTCNVWILIVHMGI*PSWLCF
Trigger: GAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAAC...GATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCCCTCAGGCCAGATGGTaGTGCCTGTTCAGTATTATG +
Preference number: 4 (lower is better)
Translates to: PELETSTCNVWILICLHLPQARW*CLFSIM
Trigger: CATAATACTGAACAGGCAGCACCATCTGGCCTGAGG...GAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCTCAGGCCAGATGGTaGTGCCTGTTCAGTATTATG +
Preference number: 4 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPPQARW*CLFSIM
Trigger: CATAATACTGAACAGGCAGCACCATCTGGCCTGAGG...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp TCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAAGGGAGAGGCAGGAGGGCGGGCCTCAGGCCAGATGGTaGTGCCTGTTCAGTATTATG +
Preference number: 4 (lower is better)
Translates to: SFSLKVVKRGVRERQEGGPQARW*CLFSIM
Trigger: CATAATACTGAACAGGCAGCACCATCTGGCCTGAGG...CCCGCCCTCCTGCCTCTCCCTTACACCCCTCTTAACGACTTTCAAACTAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCAGCAGGTGGAACATTTaGCTAAGAAGGCACAATCTG +
Preference number: 4 (lower is better)
Translates to: ACTSDQQGALKQNASGSTSRWNI*LRRHNL
Trigger: CAGATTGTGCCTTCTTAGGCAAATGTTCCACCTGCT...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTAGACTTCCGCGCGCCTaGCTCTGCCCCGGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLRLPRA*LCPGSS
Trigger: GGACGAGCCGGGGCAGAGCCAGGCGCGCGGAAGTCT...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TGTACTTGTGACCTCAGGCCAGATGGTGCTGCCTGTTCAGTATTATGGGTGTCCGATTTTCTTCTGGTCTaGGGAGTCCGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: CTCDLRPDGAACSVLWVSDFLLV*GVRLHR
Trigger: TCTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATC...GGACACCCATAATACTGAACAGGCAGCACCATCTGGCCTGAGGTCACAAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAAGATTTTCTTCTGGTCTaGGGAGTCCGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: PAGCTQTKRLRKHLLQREDFLLV*GVRLHR
Trigger: TCTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATC...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTGATTTTCTTCTGGTCTaGGGAGTCCGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: DSHLLAPLTSRVHSNKTPDFLLV*GVRLHR
Trigger: TCTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATC...AGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAAGGGAGAGGCAGGAGGGCGGGCTAATGATTTTCTTCTaGTCTGGGGAGTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SFSLKVVKRGVRERQEGGLMIFF*SGESAS
Trigger: GGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAG...CCCGCCCTCCTGCCTCTCCCTTACACCCCTCTTAACGACTTTCAAACTAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCCTAATGATTTTCTTCTaGTCTGGGGAGTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: PELETSTCNVWILICLHLLMIFF*SGESAS
Trigger: GGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAG...GAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGCTAATGATTTTCTTCTaGTCTGGGGAGTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQLMIFF*SGESAS
Trigger: GGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAG...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGGCATCTGCCCGAGTTaGCTTTGCTTCTCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: LLTFLSWRPPHAMSGFSSGICPS*LCFSLG
Trigger: TCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCC...AGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CACCAGGCACAGCTGTCCACTAGGCCAACAGATACAAACGATGTAACCAATTCGGGTACTCTGTTCACATaGGCATCTGCCCGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: HQAQLSTRPTDTNDVTNSGTLFT*ASARVG
Trigger: GCCAACTCGGGCAGATGCCCATGTGAACAGAGTACC...CGAATTGGTTACATCGTTTGTATCTGTTGGCCTAGTGGACAGCTGTGCCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCTATGGGTGTCCACAATaGAGGTTAGTAACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SACTSDQQGALKQNASGSYGCPQ*RLVTPA
Trigger: AGCTGGGGTTACTAACCTCCATTGTGGACACCCATA...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCGCCTGTTCAGTATTATaGGTGTCCACAATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: ACTSDQQGALKQNASGSTACSVL*VSTMEV
Trigger: AACCTCCATTGTGGACACCCATAATACTGAACAGGC...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCAATGGCCCAAGCAATCTaGTCGATCAGTCACCATTCT +
Preference number: 4 (lower is better)
Translates to: LLAPLTSRVHSNKTPQEAMAQAI*SISHHS
Trigger: AGAATGGTGACTGATCGACCAGATTGCTTGGGCCAT...TGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCATGGCCCAAGCAATCTaGTCGATCAGTCACCATTCT +
Preference number: 4 (lower is better)
Translates to: CTSDQQGALKQNASGSTFMAQAI*SISHHS
Trigger: AGAATGGTGACTGATCGACCAGATTGCTTGGGCCAT...GAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGAGATGGGCATGAGGTATTCCGATaGCCCAAGCAATCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: NYPRECVRWALPETSRDGHEVFR*PKQSGR
Trigger: TCGACCAGATTGCTTGGGCCATCGGAATACCTCATG...CCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGACTCACTTTCCTGAGCTaGAGACCTCCACATGCAATG +
Preference number: 4 (lower is better)
Translates to: SSACTSDQQGALKQNASGLTFLS*RPPHAM
Trigger: CATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG...TCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAAAAATGCCAGACTGTGTaGACTTGCTGGCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PAGCTQTKRLRKHLLQREKCQTV*TCWLPG
Trigger: ACCTGGGAGCCAGCAAGTCCACACAGTCTGGCATTT...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511134.1
CDS-3UTR CCA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGTTCACTTCTCTCCCGTaGAACATACTCTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQFTSLP*NILFQG
Trigger: GCCCTGGAAGAGTATGTTCCACGGGAGAGAAGTGAA...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR TCA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCCTGAGAATTCATCATTaGAATCCAGAGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: ACTSDQQGALKQNASGSTLRIHH*NPEAEM
Trigger: CATCTCTGCCTCTGGATTTCAATGATGAATTCTCAG...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTGCCTTCTTTGTTaGACCACTCCATCCAGATCT +
Preference number: 4 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPSCLLC*TTPSRS
Trigger: AGATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGA...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAAGATTCCAACAGTTTCTaGCAGACCCTGTACAGGGAG +
Preference number: 4 (lower is better)
Translates to: PAGCTQTKRLRKHLLQREDSNSF*QTLYRE
Trigger: CTCCCTGTACAGGGTCTGTCAGAAACTGTTGGAATC...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TGTGACCTCAGGCCAGATGGTGCTGCCTGTTCAGTATTATGGGTGTCCACAATGGATTCCAACAGTTTCTaGCAGACCCTGTACAGGGAG +
Preference number: 4 (lower is better)
Translates to: CDLRPDGAACSVLWVSTMDSNSF*QTLYRE
Trigger: CTCCCTGTACAGGGTCTGTCAGAAACTGTTGGAATC...CATTGTGGACACCCATAATACTGAACAGGCAGCACCATCTGGCCTGAGGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR TCA 90 bp AGAGGCAGAGATGAAGGGCGGTCTGCTCGGAAACTGTTTTCAGCAGAAGATGGAGATTCCAACAGTTTCTaGCAGACCCTGTACAGGGAG +
Preference number: 4 (lower is better)
Translates to: RGRDEGRSARKLFSAEDGDSNSF*QTLYRE
Trigger: CTCCCTGTACAGGGTCTGTCAGAAACTGTTGGAATC...TCCATCTTCTGCTGAAAACAGTTTCCGAGCAGACCGCCCTTCATCTCTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR TCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCATTGAATTGTACTTGTaGCCTCAGGCCAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: TSDQQGALKQNASGSTFFIELYL*PQARWC
Trigger: GCACCATCTGGCCTGAGGTCACAAGTACAATTCAAT...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp AATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGAGATGGGATTGAATTGTACTTGTaGCCTCAGGCCAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: NYPRECVRWALPETSRDGIELYL*PQARWC
Trigger: GCACCATCTGGCCTGAGGTCACAAGTACAATTCAAT...CCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTAGCTGTAAGCTCTTaGCAGAGAACCTCCACATTG +
Preference number: 4 (lower is better)
Translates to: CTSDQQGALKQNASGSTFLAVSS*QRTSTL
Trigger: CAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAA...GAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GGATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCCTTCAAAGGGAAACATaGGGTATTCCGATGGCCCAA +
Preference number: 4 (lower is better)
Translates to: GFSSACTSDQQGALKQNALQRET*GIPMAQ
Trigger: TTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAG...GGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTGGGTGGAGTGTTTGCTaGCGCCATCGTGGTAATTAT +
Preference number: 4 (lower is better)
Translates to: DSHLLAPLTSRVHSNKTPGWSVC*RHRGNY
Trigger: ATAATTACCACGATGGCGTCAGCAAACACTCCACCC...AGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GGATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCGTGTCTTCCACATCTTaGTGTAGTTCAGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: GFSSACTSDQQGALKQNAVSSTS*CSSVIG
Trigger: CCCGATGACTGAACTACAGCAAGATGTGGAAGACAC...GGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCGGGCTGTTGGCGACCTaGAGGCTTTCTTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACGLLAT*RLSFSP
Trigger: AGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCC...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCGCACAGGTAAAGCTTTaGTTCAGTGGTTCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: PELETSTCNVWILICLHLAQVKL*FSGSSV
Trigger: AACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGC...GAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp TCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAGCACAGGTAAAGCTTTaGTTCAGTGGTTCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: SSACTSDQQGALKQNASGAQVKL*FSGSSV
Trigger: AACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGC...TCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp TCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAAGGGAGAGGCAGGAGGGCGGGGCACAGGTAAAGCTTTaGTTCAGTGGTTCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: SFSLKVVKRGVRERQEGGAQVKL*FSGSSV
Trigger: AACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGC...CCCGCCCTCCTGCCTCTCCCTTACACCCCTCTTAACGACTTTCAAACTAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp AATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGAGATGGGGCACAGGTAAAGCTTTaGTTCAGTGGTTCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: NYPRECVRWALPETSRDGAQVKL*FSGSSV
Trigger: AACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGC...CCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCCCTGTCTGTGACTGTTaGTATGATCAGGGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: PPHFPELETSTCNVWILIPVCDC*YDQGVW
Trigger: CCAAACGCCCTGATCATAGCAACAGTCACAGACAGG...GATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTCCTGTCTGTGACTGTTaGTATGATCAGGGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSPVCDC*YDQGVW
Trigger: CCAAACGCCCTGATCATAGCAACAGTCACAGACAGG...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAATGCCCGAGTTGGCTTTaGTTCTCCCTTGGAGACATT +
Preference number: 4 (lower is better)
Translates to: PAGCTQTKRLRKHLLQRECPSWL*FSLGDI
Trigger: AATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCA...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTGCCCGAGTTGGCTTTaGTTCTCCCTTGGAGACATT +
Preference number: 4 (lower is better)
Translates to: PHFPELETSTCNVWILICCPSWL*FSLGDI
Trigger: AATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCA...GCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CACCAGGCACAGCTGTCCACTAGGCCAACAGATACAAACGATGTAACCAATTCGGTTCACATGGGCATCTaGCCGAGTTGGCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: HQAQLSTRPTDTNDVTNSVHMGI*PSWLCF
Trigger: GAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAAC...CGAATTGGTTACATCGTTTGTATCTGTTGGCCTAGTGGACAGCTGTGCCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGTTCACATGGGCATCTaGCCGAGTTGGCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLTFLSWRPPHAMSGFSSVHMGI*PSWLCF
Trigger: GAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAAC...AGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCGTTCACATGGGCATCTaGCCGAGTTGGCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACVHMGI*PSWLCF
Trigger: GAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAAC...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAACCTCAGGCCAGATGGTaGTGCCTGTTCAGTATTATG +
Preference number: 4 (lower is better)
Translates to: PAGCTQTKRLRKHLLQREPQARW*CLFSIM
Trigger: CATAATACTGAACAGGCAGCACCATCTGGCCTGAGG...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GGAGTGTTTGCTGACGCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCTCAGGCCAGATGGTaGTGCCTGTTCAGTATTATG +
Preference number: 4 (lower is better)
Translates to: GVFADAIVVIIQESVFAGPQARW*CLFSIM
Trigger: CATAATACTGAACAGGCAGCACCATCTGGCCTGAGG...CCCAGCGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp AGACCCTGTACAGGGAGACTCTTGGCTTTTCCTTCAGGTACTCTGTTCACATGGGGATTCTCATCTGCTTaGACCTCTGACCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RPCTGRLLAFPSGTLFTWGFSSA*TSDQQG
Trigger: ACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC...CCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACAGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR GCA 90 bp CTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTGGATTCTCATCTGCTTaGACCTCTGACCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LTFLSWRPPHAMSGFSSAGFSSA*TSDQQG
Trigger: ACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC...AGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTATTAAAAGCCAGAGGTaGACCAGGCACAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSIKSQR*TRHSCP
Trigger: TGGACAGCTGTGCCTGGTGCACCTCTGGCTTTTAAT...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AGCACCTTCTTCAAAGGGAAACATGAGGTATTCCGATGGCCCAAGCAATCTGGTAGGGGATTGGGCTGTTaGCGACCTGCAGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: STFFKGKHEVFRWPKQSGRGLGC*RPAGFL
Trigger: AAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCT...ACCAGATTGCTTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAGAAGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCCGCCTCCACAGATaGGGTAGGGGATTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: NQNYFPPHFPELETSTCNVRLHR*GRGLGC
Trigger: ACAGCCCAATCCCCTACCCCATCTGTGGAGGCGGAC...ATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTGATTTTCTTCTGGTCTaGGGAGTCCGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: LTFLSWRPPHAMSGFSSADFLLV*GVRLHR
Trigger: TCTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATC...AGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAACTAATGATTTTCTTCTaGTCTGGGGAGTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: PAGCTQTKRLRKHLLQRELMIFF*SGESAS
Trigger: GGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAG...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTGTGAAAGTGCATATTaGCCTTGTACTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPCESAY*PCTGWK
Trigger: CTTCCAGCCAGTACAAGGCCAATATGCACTTTCACA...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CCA 90 bp GGATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCAAAGCTTTGCTTCAGTaGTTCCTCCGTTGGGACACT +
Preference number: 4 (lower is better)
Translates to: GFSSACTSDQQGALKQNAKALLQ*FLRWDT
Trigger: AGTGTCCCAACGGAGGAACCACTGAAGCAAAGCTTT...GGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTAAAGCTTTGCTTCAGTaGTTCCTCCGTTGGGACACT +
Preference number: 4 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPKALLQ*FLRWDT
Trigger: AGTGTCCCAACGGAGGAACCACTGAAGCAAAGCTTT...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCGGTTACCGAGAAAGCTaGAATAGAGATCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: ACTSDQQGALKQNASGSTGYRES*NRDLCV
Trigger: GACACAAAGATCTCTATTCCAGCTTTCTCGGTAACC...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCCAGCAGAAGATGGATTaGGACTGTTACCAACACTTG +
Preference number: 4 (lower is better)
Translates to: CTSDQQGALKQNASGSTFQQKMD*DCYQHL
Trigger: CAAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTG...GAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCTGGGATTCTGTCGCATaGAAATCTCGAGAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SACTSDQQGALKQNASGSWDSVA*KSREFS
Trigger: TGAGAACTCTCGAGATTTCCATGCGACAGAATCCCA...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTGGGATTCTGTCGCATaGAAATCTCGAGAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: CTSDQQGALKQNASGSTFWDSVA*KSREFS
Trigger: TGAGAACTCTCGAGATTTCCATGCGACAGAATCCCA...GAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCATGGGATTCTGTCGCATaGAAATCTCGAGAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LLAPLTSRVHSNKTPQEAWDSVA*KSREFS
Trigger: TGAGAACTCTCGAGATTTCCATGCGACAGAATCCCA...TGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGTACAGGGAGACTCTTaGCTTTTCCTTCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQVQGDS*LFLQVL
Trigger: GAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTAC...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTGCCTGTTCAGTATTATaGGTGTCCACAATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPACSVL*VSTMEV
Trigger: AACCTCCATTGTGGACACCCATAATACTGAACAGGC...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCCATGAGGTATTCCGATaGCCCAAGCAATCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: PPHFPELETSTCNVWILIHEVFR*PKQSGR
Trigger: TCGACCAGATTGCTTGGGCCATCGGAATACCTCATG...GATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCTGCCTGTTCAGTATTATGGGTGTCCACAATGGAGGTTAGTAACCCCAGCTGCCATGAGGTATTCCGATaGCCCAAGCAATCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: AACSVLWVSTMEVSNPSCHEVFR*PKQSGR
Trigger: TCGACCAGATTGCTTGGGCCATCGGAATACCTCATG...GCAGCTGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp ATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCACATGAGGTATTCCGATaGCCCAAGCAATCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: IVVIIQESVFAGPFLRPPHEVFR*PKQSGR
Trigger: TCGACCAGATTGCTTGGGCCATCGGAATACCTCATG...TGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCCACATGCAATGTCTaGATTCTCATCTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPSTCNV*ILICLH
Trigger: GTGCAAGCAGATGAGAATCCAGACATTGCATGTGGA...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GGAGTGTTTGCTGACGCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCTCACTTTCCTGAGCTaGAGACCTCCACATGCAATG +
Preference number: 4 (lower is better)
Translates to: GVFADAIVVIIQESVFAGLTFLS*RPPHAM
Trigger: CATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG...CCCAGCGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCTTTTCCTTCAGGTACTCTGTTCACATGGGCATCTGCCCGAGTTGGCTTTGCTCTCACTTTCCTGAGCTaGAGACCTCCACATGCAATG +
Preference number: 4 (lower is better)
Translates to: AFPSGTLFTWASARVGFALTFLS*RPPHAM
Trigger: CATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG...AGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp TTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCAGAGAGTGTGTTCGCTaGGCCCTTCCTGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: LHKNQNYFPPHFPELETSRECVR*ALPETS
Trigger: GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCT...GGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTAATTGGCCAAGCAGGTaGAACATTTGCCTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPNWPSR*NICLRR
Trigger: CCTTCTTAGGCAAATGTTCCACCTGCTTGGCCAATT...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCAATTGGCCAAGCAGGTaGAACATTTGCCTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: CTSDQQGALKQNASGSTFNWPSR*NICLRR
Trigger: CCTTCTTAGGCAAATGTTCCACCTGCTTGGCCAATT...GAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCGGAGAGGAAGCTAATTaGCCAAGCAGGTGGAACATT +
Preference number: 4 (lower is better)
Translates to: HRGNYPRECVRWALPETSGEEAN*PSRWNI
Trigger: AATGTTCCACCTGCTTGGCCAATTAGCTTCCTCTCC...GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR CAA 72 bp GTACTCTGTTCACATGGGCATCTGCCCGAGTTGGCTTaGCTTCTCCCTTGGAGACATTCAGAACTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: VLCSHGHLPELA*LLPWRHSELFG
Trigger: CCCAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
3UTR CAA 72 bp CTTCAGGTACTCTGTTCACATGGGCATCTGCCCGAGTaGGCTTTGCTTCTCCCTTGGAGACATTCAGAACTG +
Preference number: 4 (lower is better)
Translates to: LQVLCSHGHLPE*ALLLPWRHSEL
Trigger: CAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR TCA 90 bp TGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCCTGAGAATTCATCATTaGAATCCAGAGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: CTSDQQGALKQNASGSTFLRIHH*NPEAEM
Trigger: CATCTCTGCCTCTGGATTTCAATGATGAATTCTCAG...GAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTGTAGAAGGTCGAGATaGTTAGTGCACAGACAACAA +
Preference number: 4 (lower is better)
Translates to: CTSDQQGALKQNASGSTFCRRSR*LVHRQQ
Trigger: TTGTTGTCTGTGCACTAATCATCTCGACCTTCTACA...GAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTATTGAATTGTACTTGTaGCCTCAGGCCAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: DSHLLAPLTSRVHSNKTPIELYL*PQARWC
Trigger: GCACCATCTGGCCTGAGGTCACAAGTACAATTCAAT...AGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCATTGAATTGTACTTGTaGCCTCAGGCCAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: PPHFPELETSTCNVWILIIELYL*PQARWC
Trigger: GCACCATCTGGCCTGAGGTCACAAGTACAATTCAAT...GATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp ATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAATTGAATTGTACTTGTaGCCTCAGGCCAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: IVVIIQESVFAGPFLRPPIELYL*PQARWC
Trigger: GCACCATCTGGCCTGAGGTCACAAGTACAATTCAAT...TGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GCTGCCTGTTCAGTATTATGGGTGTCCACAATGGAGGTTAGTAACCCCAGCTGCATTGAATTGTACTTGTaGCCTCAGGCCAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: AACSVLWVSTMEVSNPSCIELYL*PQARWC
Trigger: GCACCATCTGGCCTGAGGTCACAAGTACAATTCAAT...GCAGCTGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR TCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCTTAGCTGTAAGCTCTTaGCAGAGAACCTCCACATTG +
Preference number: 4 (lower is better)
Translates to: TSDQQGALKQNASGSTFFLAVSS*QRTSTL
Trigger: CAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAA...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGAAAAAGGAAACCTGTTaGACGAGTCTTTCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQKKETC*TSLSGE
Trigger: CTCTCCCGAAAGACTCGTTCAACAGGTTTCCTTTTT...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCGTGTCTTCCACATCTTaGTGTAGTTCAGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: PHFPELETSTCNVWILICVSSTS*CSSVIG
Trigger: CCCGATGACTGAACTACAGCAAGATGTGGAAGACAC...GCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GCTTTTCCTTCAGGTACTCTGTTCACATGGGCATCTGCCCGAGTTGGCTTTGCTGTGTCTTCCACATCTTaGTGTAGTTCAGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: AFPSGTLFTWASARVGFAVSSTS*CSSVIG
Trigger: CCCGATGACTGAACTACAGCAAGATGTGGAAGACAC...AGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR GCA 90 bp ATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGTGTCTTCCACATCTTaGTGTAGTTCAGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: IVVIIQESVFAGPFLRPPVSSTS*CSSVIG
Trigger: CCCGATGACTGAACTACAGCAAGATGTGGAAGACAC...TGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GACATTCAGAACTGTTTGGGATTCTGTCGCATGGAAATCTCGAGAGTTCTCAGAGGGCTGAGCCAAGTTTaGTCTCCCTCTTCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: DIQNCLGFCRMEISRVLRGLSQV*SPSSRA
Trigger: TGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCC...TCTGAGAACTCTCGAGATTTCCATGCGACAGAATCCCAAACAGTTCTGAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR GCA 90 bp GATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTGCACAGGTAAAGCTTTaGTTCAGTGGTTCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: DSHLLAPLTSRVHSNKTPAQVKL*FSGSSV
Trigger: AACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGC...AGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GCTTTTCCTTCAGGTACTCTGTTCACATGGGCATCTGCCCGAGTTGGCTTTGCTGCACAGGTAAAGCTTTaGTTCAGTGGTTCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: AFPSGTLFTWASARVGFAAQVKL*FSGSSV
Trigger: AACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGC...AGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR GCA 90 bp GACAGACCCTGTACAGGGAGACTCTTGGCTTTTCCTTCAGGTACTCTGTTCACACCTGTCTGTGACTGTTaGTATGATCAGGGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: DRPCTGRLLAFPSGTLFTPVCDC*YDQGVW
Trigger: CCAAACGCCCTGATCATAGCAACAGTCACAGACAGG...TGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACAGGGTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR GCA 90 bp CACCAGGCACAGCTGTCCACTAGGCCAACAGATACAAACGATGTAACCAATTCGCCTGTCTGTGACTGTTaGTATGATCAGGGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: HQAQLSTRPTDTNDVTNSPVCDC*YDQGVW
Trigger: CCAAACGCCCTGATCATAGCAACAGTCACAGACAGG...CGAATTGGTTACATCGTTTGTATCTGTTGGCCTAGTGGACAGCTGTGCCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCTGCCCGAGTTGGCTTTaGTTCTCCCTTGGAGACATT +
Preference number: 4 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACCPSWL*FSLGDI
Trigger: AATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCA...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTTGCCCGAGTTGGCTTTaGTTCTCCCTTGGAGACATT +
Preference number: 4 (lower is better)
Translates to: LLTFLSWRPPHAMSGFSSCPSWL*FSLGDI
Trigger: AATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCA...AGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCCCTCAGGCCAGATGGTaGTGCCTGTTCAGTATTATG +
Preference number: 4 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACPQARW*CLFSIM
Trigger: CATAATACTGAACAGGCAGCACCATCTGGCCTGAGG...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCATTAAAAGCCAGAGGTaGACCAGGCACAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACIKSQR*TRHSCP
Trigger: TGGACAGCTGTGCCTGGTGCACCTCTGGCTTTTAAT...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp ATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCATTGAGCCAGTTGGTGTaGTTTTCGCTCACAAGTGCT +
Preference number: 4 (lower is better)
Translates to: IVVIIQESVFAGPFLRPPLSQLV*FSLTSA
Trigger: AGCACTTGTGAGCGAAAAGCACACCAACTGGCTCAA...TGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR CCA 90 bp ACTTTATGTAAGATTCCAACAGTTTCTGACAGACCCTGTACAGGGAGACTCTTGCATCGGGGCCGTGTCTaGAGGGCACCTTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: TLCKIPTVSDRPCTGRLLHRGRV*RAPSDF
Trigger: GAAGTCTGAAGGTGCCCTCCAGACACGGCCCCGATG...CAAGAGTCTCCCTGTACAGGGTCTGTCAGAAACTGTTGGAATCTTACATAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp CTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTCTAATGATTTTCTTCTaGTCTGGGGAGTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LLTFLSWRPPHAMSGFSSLMIFF*SGESAS
Trigger: GGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAG...AGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAAGGGAGAGGCAGGAGGGCGGGTGTGAAAGTGCATATTaGCCTTGTACTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SFSLKVVKRGVRERQEGGCESAY*PCTGWK
Trigger: CTTCCAGCCAGTACAAGGCCAATATGCACTTTCACA...CCCGCCCTCCTGCCTCTCCCTTACACCCCTCTTAACGACTTTCAAACTAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000542322.5
CDS-3UTR CCA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGTGTGAAAGTGCATATTaGCCTTGTACTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQCESAY*PCTGWK
Trigger: CTTCCAGCCAGTACAAGGCCAATATGCACTTTCACA...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CCA 90 bp AATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGAGATGGGCAGTGGTTCCTCCGTTaGGACACTAAGAAACAACTT +
Preference number: 4 (lower is better)
Translates to: NYPRECVRWALPETSRDGQWFLR*DTKKQL
Trigger: AAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTG...CCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCCAGTGGTTCCTCCGTTaGGACACTAAGAAACAACTT +
Preference number: 4 (lower is better)
Translates to: HRGNYPRECVRWALPETSQWFLR*DTKKQL
Trigger: AAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTG...GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCCAGTGGTTCCTCCGTTaGGACACTAAGAAACAACTT +
Preference number: 4 (lower is better)
Translates to: TSDQQGALKQNASGSTFFQWFLR*DTKKQL
Trigger: AAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTG...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCAAAGCTTTGCTTCAGTaGTTCCTCCGTTGGGACACT +
Preference number: 4 (lower is better)
Translates to: PPHFPELETSTCNVWILIKALLQ*FLRWDT
Trigger: AGTGTCCCAACGGAGGAACCACTGAAGCAAAGCTTT...GATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAAAAAGCTTTGCTTCAGTaGTTCCTCCGTTGGGACACT +
Preference number: 4 (lower is better)
Translates to: PAGCTQTKRLRKHLLQREKALLQ*FLRWDT
Trigger: AGTGTCCCAACGGAGGAACCACTGAAGCAAAGCTTT...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGAGATGGGCAGCAGAAGATGGATTaGGACTGTTACCAACACTTG +
Preference number: 4 (lower is better)
Translates to: NYPRECVRWALPETSRDGQQKMD*DCYQHL
Trigger: CAAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTG...CCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCGTTTTCAGCAGAAGATaGATTGGGACTGTTACCAAC +
Preference number: 4 (lower is better)
Translates to: SACTSDQQGALKQNASGSVFSRR*IGTVTN
Trigger: GTTGGTAACAGTCCCAATCCATCTTCTGCTGAAAAC...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGTGGGATTCTGTCGCATaGAAATCTCGAGAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQWDSVA*KSREFS
Trigger: TGAGAACTCTCGAGATTTCCATGCGACAGAATCCCA...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCGCTTTGCTTCTCCCTTaGAGACATTCAGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: CTSDQQGALKQNASGSTFALLLP*RHSELF
Trigger: AAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGC...GAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp ATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGTACAGGGAGACTCTTaGCTTTTCCTTCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: IVVIIQESVFAGPFLRPPVQGDS*LFLQVL
Trigger: GAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTAC...TGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCTGCCTGTTCAGTATTATGGGTGTCCACAATGGAGGTTAGTAACCCCAGCTGCGTACAGGGAGACTCTTaGCTTTTCCTTCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: AACSVLWVSTMEVSNPSCVQGDS*LFLQVL
Trigger: GAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTAC...GCAGCTGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTGTACAGGGAGACTCTTaGCTTTTCCTTCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSVQGDS*LFLQVL
Trigger: GAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTAC...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAATATGGGTGTCCACAATaGAGGTTAGTAACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PAGCTQTKRLRKHLLQREYGCPQ*RLVTPA
Trigger: AGCTGGGGTTACTAACCTCCATTGTGGACACCCATA...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTATGGGTGTCCACAATaGAGGTTAGTAACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PPHFPELETSTCNVWILIYGCPQ*RLVTPA
Trigger: AGCTGGGGTTACTAACCTCCATTGTGGACACCCATA...GATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp ATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAATGGCCCAAGCAATCTaGTCGATCAGTCACCATTCT +
Preference number: 4 (lower is better)
Translates to: IVVIIQESVFAGPFLRPPMAQAI*SISHHS
Trigger: AGAATGGTGACTGATCGACCAGATTGCTTGGGCCAT...TGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAAATGGCCCAAGCAATCTaGTCGATCAGTCACCATTCT +
Preference number: 4 (lower is better)
Translates to: PAGCTQTKRLRKHLLQREMAQAI*SISHHS
Trigger: AGAATGGTGACTGATCGACCAGATTGCTTGGGCCAT...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGTCCACATGCAATGTCTaGATTCTCATCTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQSTCNV*ILICLH
Trigger: GTGCAAGCAGATGAGAATCCAGACATTGCATGTGGA...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCCTCACTTTCCTGAGCTaGAGACCTCCACATGCAATG +
Preference number: 4 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACLTFLS*RPPHAM
Trigger: CATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTCTCACTTTCCTGAGCTaGAGACCTCCACATGCAATG +
Preference number: 4 (lower is better)
Translates to: LTFLSWRPPHAMSGFSSALTFLS*RPPHAM
Trigger: CATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG...AGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTATTCTTGACCAGGGCTaGGTAAGAATCAGTCCAATT +
Preference number: 4 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPILDQG*VRISPI
Trigger: AATTGGACTGATTCTTACCCAGCCCTGGTCAAGAAT...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAAGGAGAGGAAGCTAATTaGCCAAGCAGGTGGAACATT +
Preference number: 4 (lower is better)
Translates to: PAGCTQTKRLRKHLLQREGEEAN*PSRWNI
Trigger: AATGTTCCACCTGCTTGGCCAATTAGCTTCCTCTCC...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCTGTGAAAGTGCATATTaGCCTTGTATCTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SACTSDQQGALKQNASGSCESAY*PCILVL
Trigger: CAGGACCAAGATACAAGGCCAATATGCACTTTCACA...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515200.5
CDS-3UTR CCA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTATCTTCAAGAAACTCTaGGAAATGTCGGGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPIFKKL*EMSGRN
Trigger: GTTCCTTCCCGACATTTCCCAGAGTTTCTTGAAGAT...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR TCA 90 bp TCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAAGGGAGAGGCAGGAGGGCGGGCTGAGAATTCATCATTaGAATCCAGAGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SFSLKVVKRGVRERQEGGLRIHH*NPEAEM
Trigger: CATCTCTGCCTCTGGATTTCAATGATGAATTCTCAG...CCCGCCCTCCTGCCTCTCCCTTACACCCCTCTTAACGACTTTCAAACTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTCTTGCCTTCTTTGTTaGACCACTCCATCCAGATCT +
Preference number: 4 (lower is better)
Translates to: PPHFPELETSTCNVWILISCLLC*TTPSRS
Trigger: AGATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGA...GATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTTCTTGCCTTCTTTGTTaGACCACTCCATCCAGATCT +
Preference number: 4 (lower is better)
Translates to: DSHLLAPLTSRVHSNKTPSCLLC*TTPSRS
Trigger: AGATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGA...AGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTCTTGCCTTCTTTGTTaGACCACTCCATCCAGATCT +
Preference number: 4 (lower is better)
Translates to: PHFPELETSTCNVWILICSCLLC*TTPSRS
Trigger: AGATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGA...GCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTCAGATTCAGGAGTTTaGGAACCAGAACTGCTATAT +
Preference number: 4 (lower is better)
Translates to: CTSDQQGALKQNASGSTFSDSGV*EPELLY
Trigger: ATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGA...GAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCAGCATCGGACATTTCTaGGACTTGACTTTATGTAAG +
Preference number: 4 (lower is better)
Translates to: SACTSDQQGALKQNASGSSIGHF*DLTLCK
Trigger: CTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCT...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTAGCATCGGACATTTCTaGGACTTGACTTTATGTAAG +
Preference number: 4 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPSIGHF*DLTLCK
Trigger: CTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCT...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTTGTAGAAGGTCGAGATaGTTAGTGCACAGACAACAA +
Preference number: 4 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPCRRSR*LVHRQQ
Trigger: TTGTTGTCTGTGCACTAATCATCTCGACCTTCTACA...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp AATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGAGATGGGTGTAGAAGGTCGAGATaGTTAGTGCACAGACAACAA +
Preference number: 4 (lower is better)
Translates to: NYPRECVRWALPETSRDGCRRSR*LVHRQQ
Trigger: TTGTTGTCTGTGCACTAATCATCTCGACCTTCTACA...CCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCTGTAGAAGGTCGAGATaGTTAGTGCACAGACAACAA +
Preference number: 4 (lower is better)
Translates to: TSDQQGALKQNASGSTFFCRRSR*LVHRQQ
Trigger: TTGTTGTCTGTGCACTAATCATCTCGACCTTCTACA...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAAGGGAGAGGCAGGAGGGCGGGTGTAGAAGGTCGAGATaGTTAGTGCACAGACAACAA +
Preference number: 4 (lower is better)
Translates to: SFSLKVVKRGVRERQEGGCRRSR*LVHRQQ
Trigger: TTGTTGTCTGTGCACTAATCATCTCGACCTTCTACA...CCCGCCCTCCTGCCTCTCCCTTACACCCCTCTTAACGACTTTCAAACTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTGTAGAAGGTCGAGATaGTTAGTGCACAGACAACAA +
Preference number: 4 (lower is better)
Translates to: PELETSTCNVWILICLHLCRRSR*LVHRQQ
Trigger: TTGTTGTCTGTGCACTAATCATCTCGACCTTCTACA...GAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCAGAGAACCTCCACATTaGATTGTACTTGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: PELETSTCNVWILICLHLREPPH*IVLVTS
Trigger: TGAGGTCACAAGTACAATTCAATGTGGAGGTTCTCT...GAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAGAGAACCTCCACATTaGATTGTACTTGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: TSDQQGALKQNASGSTFFREPPH*IVLVTS
Trigger: TGAGGTCACAAGTACAATTCAATGTGGAGGTTCTCT...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGAGAGAACCTCCACATTaGATTGTACTTGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQREPPH*IVLVTS
Trigger: TGAGGTCACAAGTACAATTCAATGTGGAGGTTCTCT...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GACAGACCCTGTACAGGGAGACTCTTGGCTTTTCCTTCAGGTACTCTGTTCACACTTCAAAGGGAAACATaGGGTATTCCGATGGCCCAA +
Preference number: 4 (lower is better)
Translates to: DRPCTGRLLAFPSGTLFTLQRET*GIPMAQ
Trigger: TTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAG...TGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACAGGGTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR TCA 90 bp CACCAGGCACAGCTGTCCACTAGGCCAACAGATACAAACGATGTAACCAATTCGCTTCAAAGGGAAACATaGGGTATTCCGATGGCCCAA +
Preference number: 4 (lower is better)
Translates to: HQAQLSTRPTDTNDVTNSLQRET*GIPMAQ
Trigger: TTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAG...CGAATTGGTTACATCGTTTGTATCTGTTGGCCTAGTGGACAGCTGTGCCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCAGGGCTGTTGGCGACCTaGAGGCTTTCTTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPGLLAT*RLSFSP
Trigger: AGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCC...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTTGAGAACCAGAACTaGTATATCCTTCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: ACTSDQQGALKQNASGSTFENQN*YILPCL
Trigger: AAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAA...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCGTTAGTAACCCCAGCTaGTCCTCCAGAGTATTAATT +
Preference number: 4 (lower is better)
Translates to: PELETSTCNVWILICLHLVSNPS*SSRVLI
Trigger: AATTAATACTCTGGAGGAGCAGCTGGGGTTACTAAC...GAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp TCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAGTTAGTAACCCCAGCTaGTCCTCCAGAGTATTAATT +
Preference number: 4 (lower is better)
Translates to: SSACTSDQQGALKQNASGVSNPS*SSRVLI
Trigger: AATTAATACTCTGGAGGAGCAGCTGGGGTTACTAAC...TCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTGTTAGTAACCCCAGCTaGTCCTCCAGAGTATTAATT +
Preference number: 4 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPVSNPS*SSRVLI
Trigger: AATTAATACTCTGGAGGAGCAGCTGGGGTTACTAAC...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp ATTCCGATGGCCCAAGCAATCTGGTCGATCAGTCACCATTCTCAAGCAACTTCTCCTCAGGCCAGATGGTaGTGCCTGTTCAGTATTATG +
Preference number: 4 (lower is better)
Translates to: IPMAQAIWSISHHSQATSPQARW*CLFSIM
Trigger: CATAATACTGAACAGGCAGCACCATCTGGCCTGAGG...AGAAGTTGCTTGAGAATGGTGACTGATCGACCAGATTGCTTGGGCCATCGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR GCA 90 bp TTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCGGATTCTCATCTGCTTaGACCTCTGACCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LHKNQNYFPPHFPELETSGFSSA*TSDQQG
Trigger: ACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC...GGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCAGGATTCTCATCTGCTTaGACCTCTGACCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPGFSSA*TSDQQG
Trigger: ACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GGAGTGTTTGCTGACGCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGAGCAGGTGGAACATTTaGCTAAGAAGGCACAATCTG +
Preference number: 4 (lower is better)
Translates to: GVFADAIVVIIQESVFAGSRWNI*LRRHNL
Trigger: CAGATTGTGCCTTCTTAGGCAAATGTTCCACCTGCT...CCCAGCGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCATTCTCAGCCTCTGAGTaGGCTGAGCCAAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPFSASE*AEPSLL
Trigger: GAGCAAACTTGGCTCAGCCCACTCAGAGGCTGAGAA...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCAGATTTTCTTCTGGTCTaGGGAGTCCGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPDFLLV*GVRLHR
Trigger: TCTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATC...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCATATTGGCCTTGTACTaGCTGGAAGATGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: SACTSDQQGALKQNASGSILALY*LEDEDF
Trigger: AAAGTCTTCATCTTCCAGCCAGTACAAGGCCAATAT...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CCA 90 bp CCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCCAGTGGTTCCTCCGTTaGGACACTAAGAAACAACTT +
Preference number: 4 (lower is better)
Translates to: PPHFPELETSTCNVWILIQWFLR*DTKKQL
Trigger: AAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTG...GATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTAAAGCTTTGCTTCAGTaGTTCCTCCGTTGGGACACT +
Preference number: 4 (lower is better)
Translates to: LLTFLSWRPPHAMSGFSSKALLQ*FLRWDT
Trigger: AGTGTCCCAACGGAGGAACCACTGAAGCAAAGCTTT...AGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCCAGCAGAAGATGGATTaGGACTGTTACCAACACTTG +
Preference number: 4 (lower is better)
Translates to: PPHFPELETSTCNVWILIQQKMD*DCYQHL
Trigger: CAAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTG...GATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTGTTTTCAGCAGAAGATaGATTGGGACTGTTACCAAC +
Preference number: 4 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPVFSRR*IGTVTN
Trigger: GTTGGTAACAGTCCCAATCCATCTTCTGCTGAAAAC...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAGTTTTCAGCAGAAGATaGATTGGGACTGTTACCAAC +
Preference number: 4 (lower is better)
Translates to: SSACTSDQQGALKQNASGVFSRR*IGTVTN
Trigger: GTTGGTAACAGTCCCAATCCATCTTCTGCTGAAAAC...TCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GGATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCGTTTTCAGCAGAAGATaGATTGGGACTGTTACCAAC +
Preference number: 4 (lower is better)
Translates to: GFSSACTSDQQGALKQNAVFSRR*IGTVTN
Trigger: GTTGGTAACAGTCCCAATCCATCTTCTGCTGAAAAC...GGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTTGGGATTCTGTCGCATaGAAATCTCGAGAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: DSHLLAPLTSRVHSNKTPWDSVA*KSREFS
Trigger: TGAGAACTCTCGAGATTTCCATGCGACAGAATCCCA...AGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GGTACTCTGTTCACATGGGCATCTGCCCGAGTTGGCTTTGCTTCTCCCTTGGAGACATTCAGAACTGTTTaGGATTCTGTCGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: GTLFTWASARVGFASPLETFRTV*DSVAWK
Trigger: TTTCCATGCGACAGAATCCCAAACAGTTCTGAATGT...CTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp TGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCACATTCAGAACTGTTTaGGATTCTGTCGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: CTSDQQGALKQNASGSTFTFRTV*DSVAWK
Trigger: TTTCCATGCGACAGAATCCCAAACAGTTCTGAATGT...GAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAGCTTTGCTTCTCCCTTaGAGACATTCAGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: SSACTSDQQGALKQNASGALLLP*RHSELF
Trigger: AAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGC...TCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGAGATGGGGCTTTGCTTCTCCCTTaGAGACATTCAGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: NYPRECVRWALPETSRDGALLLP*RHSELF
Trigger: AAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGC...CCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGGCATCTGCCCGAGTTaGCTTTGCTTCTCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: NQNYFPPHFPELETSTCNGICPS*LCFSLG
Trigger: TCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCC...ATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTGTACAGGGAGACTCTTaGCTTTTCCTTCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: LTFLSWRPPHAMSGFSSAVQGDS*LFLQVL
Trigger: GAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTAC...AGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CACCAGGCACAGCTGTCCACTAGGCCAACAGATACAAACGATGTAACCAATTCGGTACAGGGAGACTCTTaGCTTTTCCTTCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: HQAQLSTRPTDTNDVTNSVQGDS*LFLQVL
Trigger: GAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTAC...CGAATTGGTTACATCGTTTGTATCTGTTGGCCTAGTGGACAGCTGTGCCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AGACCCTGTACAGGGAGACTCTTGGCTTTTCCTTCAGGTACTCTGTTCACATGGTATGGGTGTCCACAATaGAGGTTAGTAACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RPCTGRLLAFPSGTLFTWYGCPQ*RLVTPA
Trigger: AGCTGGGGTTACTAACCTCCATTGTGGACACCCATA...CCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACAGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAAGCCTGTTCAGTATTATaGGTGTCCACAATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PAGCTQTKRLRKHLLQREACSVL*VSTMEV
Trigger: AACCTCCATTGTGGACACCCATAATACTGAACAGGC...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GGAGTGTTTGCTGACGCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGTCCACATGCAATGTCTaGATTCTCATCTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: GVFADAIVVIIQESVFAGSTCNV*ILICLH
Trigger: GTGCAAGCAGATGAGAATCCAGACATTGCATGTGGA...CCCAGCGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTCCACATGCAATGTCTaGATTCTCATCTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: PPHFPELETSTCNVWILISTCNV*ILICLH
Trigger: GTGCAAGCAGATGAGAATCCAGACATTGCATGTGGA...GATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TTCAGGAGTTTGAGAACCAGAACTGCTATATCCTTCCATGTCTTGCCTTCTTTGAGAGAGTGTGTTCGCTaGGCCCTTCCTGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: FRSLRTRTAISFHVLPSLRECVR*ALPETS
Trigger: GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCT...CAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513978.5
CDS-3UTR CCA 90 bp TCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAATTCTTGACCAGGGCTaGGTAAGAATCAGTCCAATT +
Preference number: 4 (lower is better)
Translates to: SSACTSDQQGALKQNASGILDQG*VRISPI
Trigger: AATTGGACTGATTCTTACCCAGCCCTGGTCAAGAAT...TCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGAGATGGGATTCTTGACCAGGGCTaGGTAAGAATCAGTCCAATT +
Preference number: 4 (lower is better)
Translates to: NYPRECVRWALPETSRDGILDQG*VRISPI
Trigger: AATTGGACTGATTCTTACCCAGCCCTGGTCAAGAAT...CCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAAGGGAGAGGCAGGAGGGCGGGAGGCACCATCAAAACTaGATTTTGACTCTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SFSLKVVKRGVRERQEGGRHHQN*ILTLGP
Trigger: AGGACCAAGAGTCAAAATCCAGTTTTGATGGTGCCT...CCCGCCCTCCTGCCTCTCCCTTACACCCCTCTTAACGACTTTCAAACTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542322.5
CDS-3UTR TCA 90 bp GCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCAAATCCAGAGGCAGAGATaGAGGGCGGTCTGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: AAKSSSESQGQLLLHKNQIQRQR*RAVCSE
Trigger: TTCCGAGCAGACCGCCCTTCATCTCTGCCTCTGGAT...TTGGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CACCAGGCACAGCTGTCCACTAGGCCAACAGATACAAACGATGTAACCAATTCGTCTTGCCTTCTTTGTTaGACCACTCCATCCAGATCT +
Preference number: 4 (lower is better)
Translates to: HQAQLSTRPTDTNDVTNSSCLLC*TTPSRS
Trigger: AGATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGA...CGAATTGGTTACATCGTTTGTATCTGTTGGCCTAGTGGACAGCTGTGCCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCTCAGATTCAGGAGTTTaGGAACCAGAACTGCTATAT +
Preference number: 4 (lower is better)
Translates to: TSDQQGALKQNASGSTFFSDSGV*EPELLY
Trigger: ATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGA...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp AATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGAGATGGGAGCATCGGACATTTCTaGGACTTGACTTTATGTAAG +
Preference number: 4 (lower is better)
Translates to: NYPRECVRWALPETSRDGSIGHF*DLTLCK
Trigger: CTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCT...CCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp ATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAAGAGAACCTCCACATTaGATTGTACTTGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: IVVIIQESVFAGPFLRPPREPPH*IVLVTS
Trigger: TGAGGTCACAAGTACAATTCAATGTGGAGGTTCTCT...TGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GCAGAGATGAAGGGCGGTCTGCTCGGAAACTGTTTTCAGCAGAAGATGGATTGGAGAGAACCTCCACATTaGATTGTACTTGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: AEMKGGLLGNCFQQKMDWREPPH*IVLVTS
Trigger: TGAGGTCACAAGTACAATTCAATGTGGAGGTTCTCT...CCAATCCATCTTCTGCTGAAAACAGTTTCCGAGCAGACCGCCCTTCATCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR TCA 90 bp GGAGTGTTTGCTGACGCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGAGAGAACCTCCACATTaGATTGTACTTGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: GVFADAIVVIIQESVFAGREPPH*IVLVTS
Trigger: TGAGGTCACAAGTACAATTCAATGTGGAGGTTCTCT...CCCAGCGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GCTTTGCTTCTCCCTTGGAGACATTCAGAACTGTTTGGGATTCTGTCGCATGGACTTCAAAGGGAAACATaGGGTATTCCGATGGCCCAA +
Preference number: 4 (lower is better)
Translates to: ALLLPWRHSELFGILSHGLQRET*GIPMAQ
Trigger: TTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAG...TCCATGCGACAGAATCCCAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR TCA 90 bp CATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCATGTATCCTTTAGTTTaGAAGTCGTTAAGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: HRGNYPRECVRWALPETSMYPLV*KSLRGV
Trigger: CACCCCTCTTAACGACTTTCAAACTAAAGGATACAT...GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTATGTATCCTTTAGTTTaGAAGTCGTTAAGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPMYPLV*KSLRGV
Trigger: CACCCCTCTTAACGACTTTCAAACTAAAGGATACAT...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCATGTATCCTTTAGTTTaGAAGTCGTTAAGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: TSDQQGALKQNASGSTFFMYPLV*KSLRGV
Trigger: CACCCCTCTTAACGACTTTCAAACTAAAGGATACAT...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCATTGAAAGGACCACATTaGGTTTGTCAGTATATGATG +
Preference number: 4 (lower is better)
Translates to: LLAPLTSRVHSNKTPQEALKGPH*VCQYMM
Trigger: CATCATATACTGACAAACTCAATGTGGTCCTTTCAA...TGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCCTCATGGCTAATTCTTaGAAGGACCACATTGAGTTT +
Preference number: 4 (lower is better)
Translates to: TSDQQGALKQNASGSTFFLMANS*KDHIEF
Trigger: AAACTCAATGTGGTCCTTTCAAGAATTAGCCATGAG...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCAAGGAATTTACGAACTaGCAAAACACAGTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: SACTSDQQGALKQNASGSKEFTN*QNTVLA
Trigger: TGCTAACACTGTGTTTTGTCAGTTCGTAAATTCCTT...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285689.8
ENST00000515200.5
CDS-3UTR TCA 90 bp CTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTACCATTCTCAGCCTCTaGGCTGAAGAAGAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LLTFLSWRPPHAMSGFSSTILSL*AEEERK
Trigger: TTTCCTTTCTTCTTCAGCTCAGAGGCTGAGAATGGT...AGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511134.1
CDS-3UTR TCA 90 bp CACCAGGCACAGCTGTCCACTAGGCCAACAGATACAAACGATGTAACCAATTCGAAAAAGGAAACCTGTTaGACGAGTCTTTCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: HQAQLSTRPTDTNDVTNSKKETC*TSLSGE
Trigger: CTCTCCCGAAAGACTCGTTCAACAGGTTTCCTTTTT...CGAATTGGTTACATCGTTTGTATCTGTTGGCCTAGTGGACAGCTGTGCCTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp AGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAGCTTCTAGGTCCGGGTaGGCAGGCCAAGCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: SLSVYDVSFSLKVVKRGVASRSG*AGQASG
Trigger: GCCGCTTGCTTGGCCTGCGCACCCGGACCTAGAAGC...TACACCCCTCTTAACGACTTTCAAACTAAAGGATACATCATATACTGACAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCTTTGAGAACCAGAACTaGTATATCCTTCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: SACTSDQQGALKQNASGSFENQN*YILPCL
Trigger: AAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAA...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TTATTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCAGGGGATTGGGCTGTTaGCGACCTGCAGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LLHKNQNYFPPHFPELETRGLGC*RPAGFL
Trigger: AAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCT...GGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGATATTGGCCTTGTACTaGCTGGAAGATGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQILALY*LEDEDF
Trigger: AAAGTCTTCATCTTCCAGCCAGTACAAGGCCAATAT...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CCA 90 bp CTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTCAGTGGTTCCTCCGTTaGGACACTAAGAAACAACTT +
Preference number: 4 (lower is better)
Translates to: LLTFLSWRPPHAMSGFSSQWFLR*DTKKQL
Trigger: AAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTG...AGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AGCACCTTCTTCAAAGGGAAACATGAGGTATTCCGATGGCCCAAGCAATCTGGTAAAGCTTTGCTTCAGTaGTTCCTCCGTTGGGACACT +
Preference number: 4 (lower is better)
Translates to: STFFKGKHEVFRWPKQSGKALLQ*FLRWDT
Trigger: AGTGTCCCAACGGAGGAACCACTGAAGCAAAGCTTT...ACCAGATTGCTTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAGAAGGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TCATCATTGAAATCCAGAGGCAGAGATGAAGGGCGGTCTGCTCGGAAACTGTTTAAAGCTTTGCTTCAGTaGTTCCTCCGTTGGGACACT +
Preference number: 4 (lower is better)
Translates to: SSLKSRGRDEGRSARKLFKALLQ*FLRWDT
Trigger: AGTGTCCCAACGGAGGAACCACTGAAGCAAAGCTTT...AAACAGTTTCCGAGCAGACCGCCCTTCATCTCTGCCTCTGGATTTCAATGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCCAGCAGAAGATGGATTaGGACTGTTACCAACACTTG +
Preference number: 4 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACQQKMD*DCYQHL
Trigger: CAAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTG...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTCAGCAGAAGATGGATTaGGACTGTTACCAACACTTG +
Preference number: 4 (lower is better)
Translates to: LTFLSWRPPHAMSGFSSAQQKMD*DCYQHL
Trigger: CAAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTG...AGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTACATTCAGAACTGTTTaGGATTCTGTCGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPTFRTV*DSVAWK
Trigger: TTTCCATGCGACAGAATCCCAAACAGTTCTGAATGT...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GGAGTGTTTGCTGACGCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGGCTTTGCTTCTCCCTTaGAGACATTCAGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: GVFADAIVVIIQESVFAGALLLP*RHSELF
Trigger: AAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGC...CCCAGCGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCGCTTTGCTTCTCCCTTaGAGACATTCAGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: PPHFPELETSTCNVWILIALLLP*RHSELF
Trigger: AAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGC...GATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAAGCTTTGCTTCTCCCTTaGAGACATTCAGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: PAGCTQTKRLRKHLLQREALLLP*RHSELF
Trigger: AAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGC...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GTTCTCAGATTCAGGAGTTTGAGAACCAGAACTGCTATATCCTTCCATGTCTTGGGCATCTGCCCGAGTTaGCTTTGCTTCTCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: VLRFRSLRTRTAISFHVLGICPS*LCFSLG
Trigger: TCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCC...CAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCGCCTGTTCAGTATTATaGGTGTCCACAATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACACSVL*VSTMEV
Trigger: AACCTCCATTGTGGACACCCATAATACTGAACAGGC...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GGCGGTCTGCTCGGAAACTGTTTTCAGCAGAAGATGGATTGGGACTGTTACCAATCCACATGCAATGTCTaGATTCTCATCTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: GGLLGNCFQQKMDWDCYQSTCNV*ILICLH
Trigger: GTGCAAGCAGATGAGAATCCAGACATTGCATGTGGA...TTGGTAACAGTCCCAATCCATCTTCTGCTGAAAACAGTTTCCGAGCAGACCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp AAGCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCAGAGAGTGTGTTCGCTaGGCCCTTCCTGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: KQQNLPQRVKVNFYCTRTRECVR*ALPETS
Trigger: GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCT...GGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCCTGAGAATTCATCATTaGAATCCAGAGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACLRIHH*NPEAEM
Trigger: CATCTCTGCCTCTGGATTTCAATGATGAATTCTCAG...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTTCAGATTCAGGAGTTTaGGAACCAGAACTGCTATAT +
Preference number: 4 (lower is better)
Translates to: DSHLLAPLTSRVHSNKTPSDSGV*EPELLY
Trigger: ATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGA...AGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTTCAGATTCAGGAGTTTaGGAACCAGAACTGCTATAT +
Preference number: 4 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSSDSGV*EPELLY
Trigger: ATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGA...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp AGCACCTTCTTCAAAGGGAAACATGAGGTATTCCGATGGCCCAAGCAATCTGGTTTAGCTGTAAGCTCTTaGCAGAGAACCTCCACATTG +
Preference number: 4 (lower is better)
Translates to: STFFKGKHEVFRWPKQSGLAVSS*QRTSTL
Trigger: CAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAA...ACCAGATTGCTTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAGAAGGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCCTTCAAAGGGAAACATaGGGTATTCCGATGGCCCAA +
Preference number: 4 (lower is better)
Translates to: LHKNQNYFPPHFPELETSLQRET*GIPMAQ
Trigger: TTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAG...GGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAAGGGAGAGGCAGGAGGGCGGGTTGAAAGGACCACATTaGGTTTGTCAGTATATGATG +
Preference number: 4 (lower is better)
Translates to: SFSLKVVKRGVRERQEGGLKGPH*VCQYMM
Trigger: CATCATATACTGACAAACTCAATGTGGTCCTTTCAA...CCCGCCCTCCTGCCTCTCCCTTACACCCCTCTTAACGACTTTCAAACTAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTCTCATGGCTAATTCTTaGAAGGACCACATTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSLMANS*KDHIEF
Trigger: AAACTCAATGTGGTCCTTTCAAGAATTAGCCATGAG...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GGAGTGTTTGCTGACGCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCTCATGGCTAATTCTTaGAAGGACCACATTGAGTTT +
Preference number: 4 (lower is better)
Translates to: GVFADAIVVIIQESVFAGLMANS*KDHIEF
Trigger: AAACTCAATGTGGTCCTTTCAAGAATTAGCCATGAG...CCCAGCGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp AACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATCCAACCACAGCTCTTTaGGCCAGTTGGTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: NQNYFPPHFPELETSTCNPTTAL*ASWCAF
Trigger: AAAAGCACACCAACTGGCTCAAAGAGCTGTGGTTGG...ATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR GCA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCAGTGTCTTCCACATCTTaGTGTAGTTCAGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPVSSTS*CSSVIG
Trigger: CCCGATGACTGAACTACAGCAAGATGTGGAAGACAC...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTTTTGAGAACCAGAACTaGTATATCCTTCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPFENQN*YILPCL
Trigger: AAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAA...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCTTTGAGAACCAGAACTaGTATATCCTTCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: TSDQQGALKQNASGSTFFFENQN*YILPCL
Trigger: AAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAA...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCGTTAGTAACCCCAGCTaGTCCTCCAGAGTATTAATT +
Preference number: 4 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACVSNPS*SSRVLI
Trigger: AATTAATACTCTGGAGGAGCAGCTGGGGTTACTAAC...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGTTAGTAACCCCAGCTaGTCCTCCAGAGTATTAATT +
Preference number: 4 (lower is better)
Translates to: LLTFLSWRPPHAMSGFSSVSNPS*SSRVLI
Trigger: AATTAATACTCTGGAGGAGCAGCTGGGGTTACTAAC...AGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp AACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATCCTCAGGCCAGATGGTaGTGCCTGTTCAGTATTATG +
Preference number: 4 (lower is better)
Translates to: NQNYFPPHFPELETSTCNPQARW*CLFSIM
Trigger: CATAATACTGAACAGGCAGCACCATCTGGCCTGAGG...ATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCCTTTTCGCTCACAAGTaGTATCTCAGAAGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: PHFPELETSTCNVWILICLFAHK*YLRSFL
Trigger: GAGAAAACTTCTGAGATAGCACTTGTGAGCGAAAAG...GCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR CCA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCGGTTACCGAGAAAGCTaGAATAGAGATCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACGYRES*NRDLCV
Trigger: GACACAAAGATCTCTATTCCAGCTTTCTCGGTAACC...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTGGTTACCGAGAAAGCTaGAATAGAGATCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: LTFLSWRPPHAMSGFSSAGYRES*NRDLCV
Trigger: GACACAAAGATCTCTATTCCAGCTTTCTCGGTAACC...AGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AGACCCTGTACAGGGAGACTCTTGGCTTTTCCTTCAGGTACTCTGTTCACATGGGGTTACCGAGAAAGCTaGAATAGAGATCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: RPCTGRLLAFPSGTLFTWGYRES*NRDLCV
Trigger: GACACAAAGATCTCTATTCCAGCTTTCTCGGTAACC...CCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACAGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp CTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGGTTACCGAGAAAGCTaGAATAGAGATCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: LLTFLSWRPPHAMSGFSSGYRES*NRDLCV
Trigger: GACACAAAGATCTCTATTCCAGCTTTCTCGGTAACC...AGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAAACATTCAGAACTGTTTaGGATTCTGTCGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: PAGCTQTKRLRKHLLQRETFRTV*DSVAWK
Trigger: TTTCCATGCGACAGAATCCCAAACAGTTCTGAATGT...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCACATTCAGAACTGTTTaGGATTCTGTCGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: PHFPELETSTCNVWILICTFRTV*DSVAWK
Trigger: TTTCCATGCGACAGAATCCCAAACAGTTCTGAATGT...GCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTACATTCAGAACTGTTTaGGATTCTGTCGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSTFRTV*DSVAWK
Trigger: TTTCCATGCGACAGAATCCCAAACAGTTCTGAATGT...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTTGCTTCTCCCTTaGAGACATTCAGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: LLTFLSWRPPHAMSGFSSALLLP*RHSELF
Trigger: AAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGC...AGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCATCTTGCCTTCTTTGTTaGACCACTCCATCCAGATCT +
Preference number: 4 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPSCLLC*TTPSRS
Trigger: AGATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGA...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTTCAGATTCAGGAGTTTaGGAACCAGAACTGCTATAT +
Preference number: 4 (lower is better)
Translates to: LLTFLSWRPPHAMSGFSSSDSGV*EPELLY
Trigger: ATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGA...AGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCTCAGATTCAGGAGTTTaGGAACCAGAACTGCTATAT +
Preference number: 4 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACSDSGV*EPELLY
Trigger: ATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGA...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTAGCATCGGACATTTCTaGGACTTGACTTTATGTAAG +
Preference number: 4 (lower is better)
Translates to: LLTFLSWRPPHAMSGFSSSIGHF*DLTLCK
Trigger: CTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCT...AGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCAGCATCGGACATTTCTaGGACTTGACTTTATGTAAG +
Preference number: 4 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACSIGHF*DLTLCK
Trigger: CTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCT...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTAGCATCGGACATTTCTaGGACTTGACTTTATGTAAG +
Preference number: 4 (lower is better)
Translates to: LTFLSWRPPHAMSGFSSASIGHF*DLTLCK
Trigger: CTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCT...AGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GAGACAAATATGTACCTGTCTGTGACTGTTGCTATGATCAGGGCGTTTGGCACTTTAGCTGTAAGCTCTTaGCAGAGAACCTCCACATTG +
Preference number: 4 (lower is better)
Translates to: ETNMYLSVTVAMIRAFGTLAVSS*QRTSTL
Trigger: CAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAA...AGTGCCAAACGCCCTGATCATAGCAACAGTCACAGACAGGTACATATTTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR TCA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCATTAGCTGTAAGCTCTTaGCAGAGAACCTCCACATTG +
Preference number: 4 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPLAVSS*QRTSTL
Trigger: CAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAA...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TTATTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCGGGTGGAGTGTTTGCTaGCGCCATCGTGGTAATTAT +
Preference number: 4 (lower is better)
Translates to: LLHKNQNYFPPHFPELETGWSVC*RHRGNY
Trigger: ATAATTACCACGATGGCGTCAGCAAACACTCCACCC...GGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTATGTATCCTTTAGTTTaGAAGTCGTTAAGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LLTFLSWRPPHAMSGFSSMYPLV*KSLRGV
Trigger: CACCCCTCTTAACGACTTTCAAACTAAAGGATACAT...AGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGAAAGGACCACATTaGGTTTGTCAGTATATGATG +
Preference number: 4 (lower is better)
Translates to: PHFPELETSTCNVWILICLKGPH*VCQYMM
Trigger: CATCATATACTGACAAACTCAATGTGGTCCTTTCAA...GCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTTTGAAAGGACCACATTaGGTTTGTCAGTATATGATG +
Preference number: 4 (lower is better)
Translates to: DSHLLAPLTSRVHSNKTPLKGPH*VCQYMM
Trigger: CATCATATACTGACAAACTCAATGTGGTCCTTTCAA...AGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTCTCATGGCTAATTCTTaGAAGGACCACATTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LLTFLSWRPPHAMSGFSSLMANS*KDHIEF
Trigger: AAACTCAATGTGGTCCTTTCAAGAATTAGCCATGAG...AGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTTTTAGGGTCGAAGCGAAGTaGCAGCCTCTTTCCCCAACC +
Preference number: 4 (lower is better)
Translates to: DVTCLKQTCPLRAIYCLFRVEAK*QPLSPT
Trigger: GGTTGGGGAAAGAGGCTGTCACTTCGCTTCGACCCT...AAAAAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTCTTGTATCTTGGTCCTaGATGAAGCATAGATTTGGA +
Preference number: 4 (lower is better)
Translates to: LTFLSWRPPHAMSGFSSALVSWS*MKHRFG
Trigger: TCCAAATCTATGCTTCATTCAGGACCAAGATACAAG...AGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515200.5
CDS-3UTR GCA 90 bp GTTGAATCTCTGGAGAGTAAGGAGACAAATATGTACCTGTCTGTGACTGTTGCTCCTGTCTGTGACTGTTaGTATGATCAGGGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: VESLESKETNMYLSVTVAPVCDC*YDQGVW
Trigger: CCAAACGCCCTGATCATAGCAACAGTCACAGACAGG...AGCAACAGTCACAGACAGGTACATATTTGTCTCCTTACTCTCCAGAGATTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR GCA 90 bp GCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCAAGGATTCTCATCTGCTTaGACCTCTGACCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: AAKSSSESQGQLLLHKNQGFSSA*TSDQQG
Trigger: ACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC...TTGGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCGGAATGTTTGCTGAATaGTCCTTTTTGCTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACGMFAE*SFLLVG
Trigger: TCCTACAAGCAAAAAGGAGCATTCAGCAAACATTCC...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR CCA 90 bp AGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTACATCGGGGCCGTGTCTaGAGGGCACCTTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: SLSVYDVSFSLKVVKRGVHRGRV*RAPSDF
Trigger: GAAGTCTGAAGGTGCCCTCCAGACACGGCCCCGATG...TACACCCCTCTTAACGACTTTCAAACTAAAGGATACATCATATACTGACAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AAGCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCTTCTCAGCCTCTGAGTaGGCTGAGCCAAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: KQQNLPQRVKVNFYCTRTFSASE*AEPSLL
Trigger: GAGCAAACTTGGCTCAGCCCACTCAGAGGCTGAGAA...GGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TTATTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCCTAATGATTTTCTTCTaGTCTGGGGAGTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LLHKNQNYFPPHFPELETLMIFF*SGESAS
Trigger: GGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAG...GGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCCAGTGGTTCCTCCGTTaGGACACTAAGAAACAACTT +
Preference number: 4 (lower is better)
Translates to: LHKNQNYFPPHFPELETSQWFLR*DTKKQL
Trigger: AAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTG...GGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTGGCATCTGCCCGAGTTaGCTTTGCTTCTCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLGICPS*LCFSLG
Trigger: TCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCC...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATTATGGGTGTCCACAATaGAGGTTAGTAACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: NQNYFPPHFPELETSTCNYGCPQ*RLVTPA
Trigger: AGCTGGGGTTACTAACCTCCATTGTGGACACCCATA...ATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCAGCCTGTTCAGTATTATaGGTGTCCACAATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPACSVL*VSTMEV
Trigger: AACCTCCATTGTGGACACCCATAATACTGAACAGGC...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CTCAGATTCAGGAGTTTGAGAACCAGAACTGCTATATCCTTCCATGTCTTGCCTATGGCCCAAGCAATCTaGTCGATCAGTCACCATTCT +
Preference number: 4 (lower is better)
Translates to: LRFRSLRTRTAISFHVLPMAQAI*SISHHS
Trigger: AGAATGGTGACTGATCGACCAGATTGCTTGGGCCAT...AGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp TGGAGACATTCAGAACTGTTTGGGATTCTGTCGCATGGAAATCTCGAGAGTTCTATGGCCCAAGCAATCTaGTCGATCAGTCACCATTCT +
Preference number: 4 (lower is better)
Translates to: WRHSELFGILSHGNLESSMAQAI*SISHHS
Trigger: AGAATGGTGACTGATCGACCAGATTGCTTGGGCCAT...AGAACTCTCGAGATTTCCATGCGACAGAATCCCAAACAGTTCTGAATGTCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp TTATTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCCATGAGGTATTCCGATaGCCCAAGCAATCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: LLHKNQNYFPPHFPELETHEVFR*PKQSGR
Trigger: TCGACCAGATTGCTTGGGCCATCGGAATACCTCATG...GGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AATGTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCAGAGAGTGTGTTCGCTaGGCCCTTCCTGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: NVDVTCLKQTCPLRAIYCRECVR*ALPETS
Trigger: GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCT...GCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCTGGGATTCTGTCGCATaGAAATCTACTCGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LHKNQNYFPPHFPELETSWDSVA*KSTREF
Trigger: GAACTCTCGAGTAGATTTCCATGCGACAGAATCCCA...GGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515200.5
CDS-3UTR CCA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTGTCTGCTCAGAGGGATaGCACCAGCCGCACTTGAAA +
Preference number: 4 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLVCSEG*HQPHLK
Trigger: TTTCAAGTGCGGCTGGTGCCATCCCTCTGAGCAGAC...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR TCA 90 bp TTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCCTGAGAATTCATCATTaGAATCCAGAGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: LHKNQNYFPPHFPELETSLRIHH*NPEAEM
Trigger: CATCTCTGCCTCTGGATTTCAATGATGAATTCTCAG...GGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp AATATGTACCTGTCTGTGACTGTTGCTATGATCAGGGCGTTTGGCACTAGAAGATCTTGCCTTCTTTGTTaGACCACTCCATCCAGATCT +
Preference number: 4 (lower is better)
Translates to: NMYLSVTVAMIRAFGTRRSCLLC*TTPSRS
Trigger: AGATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGA...TCTTCTAGTGCCAAACGCCCTGATCATAGCAACAGTCACAGACAGGTACATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR TCA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCAAGAGAACCTCCACATTaGATTGTACTTGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPREPPH*IVLVTS
Trigger: TGAGGTCACAAGTACAATTCAATGTGGAGGTTCTCT...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp CTCAGATTCAGGAGTTTGAGAACCAGAACTGCTATATCCTTCCATGTCTTGCCTTTAGCTGTAAGCTCTTaGCAGAGAACCTCCACATTG +
Preference number: 4 (lower is better)
Translates to: LRFRSLRTRTAISFHVLPLAVSS*QRTSTL
Trigger: CAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAA...AGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR TCA 90 bp GACTGTTACCAACACTTGTATTTTCTAAGTGTCCACACACAGATTTTAGTAGTTCCCTCCTCACTTTCCTaGGCTGGAGACCTCCACATG +
Preference number: 4 (lower is better)
Translates to: DCYQHLYFLSVHTQILVVPSSLS*AGDLHM
Trigger: CATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGG...AACTACTAAAATCTGTGTGTGGACACTTAGAAAATACAAGTGTTGGTAACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR TCA 90 bp GCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCAAGGGTGGAGTGTTTGCTaGCGCCATCGTGGTAATTAT +
Preference number: 4 (lower is better)
Translates to: AAKSSSESQGQLLLHKNQGWSVC*RHRGNY
Trigger: ATAATTACCACGATGGCGTCAGCAAACACTCCACCC...TTGGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp AGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAGGGCTGAGCCAAGTTTaGTCTCCCTCTTCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: SLSVYDVSFSLKVVKRGVGLSQV*SPSSRA
Trigger: TGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCC...TACACCCCTCTTAACGACTTTCAAACTAAAGGATACATCATATACTGACAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp AACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATCCAGGGCATAAGCTGTaGTTGGAATGTTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: NQNYFPPHFPELETSTCNPGHKL*LECLLN
Trigger: ATTCAGCAAACATTCCAAGCACAGCTTATGCCCTGG...ATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR CCA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTTTCTCAGCCTCTGAGTaGGCTGAGCCAAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLFSASE*AEPSLL
Trigger: GAGCAAACTTGGCTCAGCCCACTCAGAGGCTGAGAA...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AGCACCTTCTTCAAAGGGAAACATGAGGTATTCCGATGGCCCAAGCAATCTGGTATATTGGCCTTGTACTaGCTGGAAGATGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: STFFKGKHEVFRWPKQSGILALY*LEDEDF
Trigger: AAAGTCTTCATCTTCCAGCCAGTACAAGGCCAATAT...ACCAGATTGCTTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAGAAGGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CCA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCAGTTTTCAGCAGAAGATaGATTGGGACTGTTACCAAC +
Preference number: 4 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPVFSRR*IGTVTN
Trigger: GTTGGTAACAGTCCCAATCCATCTTCTGCTGAAAAC...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TTTATTAGGGTTACCGAGAAAGCTGGAATAGAGATCTTTGTGTCTTTTCCAAAGGGCATCTGCCCGAGTTaGCTTTGCTTCTCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: FIRVTEKAGIEIFVSFPKGICPS*LCFSLG
Trigger: TCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCC...CTTTGGAAAAGACACAAAGATCTCTATTCCAGCTTTCTCGGTAACCCTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp AATGTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCGGCATCTGCCCGAGTTaGCTTTGCTTCTCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: NVDVTCLKQTCPLRAIYCGICPS*LCFSLG
Trigger: TCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCC...GCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTTTTGGCATCTGCCCGAGTTaGCTTTGCTTCTCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: DVTCLKQTCPLRAIYCLFGICPS*LCFSLG
Trigger: TCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCC...AAAAAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCAACATGAGGTATTCCGATaGCCCAAGCAATCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: AAKSSSESQGQLLLHKNQHEVFR*PKQSGR
Trigger: TCGACCAGATTGCTTGGGCCATCGGAATACCTCATG...TTGGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TTATTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCGGAGAGGAAGCTAATTaGCCAAGCAGGTGGAACATT +
Preference number: 4 (lower is better)
Translates to: LLHKNQNYFPPHFPELETGEEAN*PSRWNI
Trigger: AATGTTCCACCTGCTTGGCCAATTAGCTTCCTCTCC...GGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR CAA 72 bp CGCATGGAAATCTCGAGAGTTCTCAGATTCAGGAGTTaGAGAACCAGAACTGCTATATCCTTCCATGTCTTG +
Preference number: 4 (lower is better)
Translates to: RMEISRVLRFRS*RTRTAISFHVL
Trigger: CAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGATTTCCATGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR TCA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTGATTCCAACAGTTTCTaGCAGACCCTGTACAGGGAG +
Preference number: 4 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLDSNSF*QTLYRE
Trigger: CTCCCTGTACAGGGTCTGTCAGAAACTGTTGGAATC...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCAAATTGAATTGTACTTGTaGCCTCAGGCCAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: AAKSSSESQGQLLLHKNQIELYL*PQARWC
Trigger: GCACCATCTGGCCTGAGGTCACAAGTACAATTCAAT...TTGGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TTATTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCAAAAAGGAAACCTGTTaGACGAGTCTTTCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LLHKNQNYFPPHFPELETKKETC*TSLSGE
Trigger: CTCTCCCGAAAGACTCGTTCAACAGGTTTCCTTTTT...GGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp AACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTTAGTAACCCCAGCTaGTCCTCCAGAGTATTAATT +
Preference number: 4 (lower is better)
Translates to: NQNYFPPHFPELETSTCNVSNPS*SSRVLI
Trigger: AATTAATACTCTGGAGGAGCAGCTGGGGTTACTAAC...ATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GACATTCAGAACTGTTTGGGATTCTGTCGCATGGAAATCTCGAGAGTTCTCAGAGTTAGTAACCCCAGCTaGTCCTCCAGAGTATTAATT +
Preference number: 4 (lower is better)
Translates to: DIQNCLGFCRMEISRVLRVSNPS*SSRVLI
Trigger: AATTAATACTCTGGAGGAGCAGCTGGGGTTACTAAC...TCTGAGAACTCTCGAGATTTCCATGCGACAGAATCCCAAACAGTTCTGAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp AACCAGAACTGCTATATCCTTCCATGTCTTGCCTTCTTTGTTGAACCACTCCATCAGTGGTTCCTCCGTTaGGACACTAAGAAACAACTT +
Preference number: 4 (lower is better)
Translates to: NQNCYILPCLAFFVEPLHQWFLR*DTKKQL
Trigger: AAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTG...ATGGAGTGGTTCAACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp TTATTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCCAGCAGAAGATGGATTaGGACTGTTACCAACACTTG +
Preference number: 4 (lower is better)
Translates to: LLHKNQNYFPPHFPELETQQKMD*DCYQHL
Trigger: CAAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTG...GGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GTTGAATCTCTGGAGAGTAAGGAGACAAATATGTACCTGTCTGTGACTGTTGCTCAGCAGAAGATGGATTaGGACTGTTACCAACACTTG +
Preference number: 4 (lower is better)
Translates to: VESLESKETNMYLSVTVAQQKMD*DCYQHL
Trigger: CAAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTG...AGCAACAGTCACAGACAGGTACATATTTGTCTCCTTACTCTCCAGAGATTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp AACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTTTTCAGCAGAAGATaGATTGGGACTGTTACCAAC +
Preference number: 4 (lower is better)
Translates to: NQNYFPPHFPELETSTCNVFSRR*IGTVTN
Trigger: GTTGGTAACAGTCCCAATCCATCTTCTGCTGAAAAC...ATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATTCAGAACTGTTTaGGATTCTGTCGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: LHKNQNYFPPHFPELETSTFRTV*DSVAWK
Trigger: TTTCCATGCGACAGAATCCCAAACAGTTCTGAATGT...GGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TTATTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTaGATTCTCATCTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LLHKNQNYFPPHFPELETSTCNV*ILICLH
Trigger: GTGCAAGCAGATGAGAATCCAGACATTGCATGTGGA...GGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TTCAGGAGTTTGAGAACCAGAACTGCTATATCCTTCCATGTCTTGCCTTCTTTGCTGAGAATTCATCATTaGAATCCAGAGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: FRSLRTRTAISFHVLPSLLRIHH*NPEAEM
Trigger: CATCTCTGCCTCTGGATTTCAATGATGAATTCTCAG...CAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR TCA 90 bp AACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATTCAGATTCAGGAGTTTaGGAACCAGAACTGCTATAT +
Preference number: 4 (lower is better)
Translates to: NQNYFPPHFPELETSTCNSDSGV*EPELLY
Trigger: ATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGA...ATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp AACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATAGCATCGGACATTTCTaGGACTTGACTTTATGTAAG +
Preference number: 4 (lower is better)
Translates to: NQNYFPPHFPELETSTCNSIGHF*DLTLCK
Trigger: CTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCT...ATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTATTGAATTGTACTTGTaGCCTCAGGCCAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLIELYL*PQARWC
Trigger: GCACCATCTGGCCTGAGGTCACAAGTACAATTCAAT...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TGGAGACATTCAGAACTGTTTGGGATTCTGTCGCATGGAAATCTCGAGAGTTCTTTTGACTCTTGGTCCTaGATGAAGCATAGATTTGGA +
Preference number: 4 (lower is better)
Translates to: WRHSELFGILSHGNLESSFDSWS*MKHRFG
Trigger: TCCAAATCTATGCTTCATTCAGGACCAAGAGTCAAA...AGAACTCTCGAGATTTCCATGCGACAGAATCCCAAACAGTTCTGAATGTCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513978.5
CDS-3UTR GCA 90 bp GTCCACACACAGATTTTAGTAGTTTGTAAGTTGAATCTCTGGAGAGTAAGGAGAGTGTCTTCCACATCTTaGTGTAGTTCAGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: VHTQILVVCKLNLWRVRRVSSTS*CSSVIG
Trigger: CCCGATGACTGAACTACAGCAAGATGTGGAAGACAC...TCTCCTTACTCTCCAGAGATTCAACTTACAAACTACTAAAATCTGTGTGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR GCA 90 bp AGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAGGGCTGTTGGCGACCTaGAGGCTTTCTTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLSVYDVSFSLKVVKRGVGLLAT*RLSFSP
Trigger: AGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCC...TACACCCCTCTTAACGACTTTCAAACTAAAGGATACATCATATACTGACAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCATTTGAGAACCAGAACTaGTATATCCTTCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPFENQN*YILPCL
Trigger: AAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAA...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CAAAATAAGTTTAATTTAGTACTTCAGTCACATGCCTCACAGATTCTTGACCAGTTCTCAGCCTCTGAGTaGGCTGAGCCAAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: QNKFNLVLQSHASQILDQFSASE*AEPSLL
Trigger: GAGCAAACTTGGCTCAGCCCACTCAGAGGCTGAGAA...CTGGTCAAGAATCTGTGAGGCATGTGACTGAAGTACTAAATTAAACTTATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AAGCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCTGTGAAAGTGCATATTaGCCTTGTACTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KQQNLPQRVKVNFYCTRTCESAY*PCTGWK
Trigger: CTTCCAGCCAGTACAAGGCCAATATGCACTTTCACA...GGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CCA 90 bp GCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCAAGCCTGTTCAGTATTATaGGTGTCCACAATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: AAKSSSESQGQLLLHKNQACSVL*VSTMEV
Trigger: AACCTCCATTGTGGACACCCATAATACTGAACAGGC...TTGGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCAATCCACATGCAATGTCTaGATTCTCATCTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: AAKSSSESQGQLLLHKNQSTCNV*ILICLH
Trigger: GTGCAAGCAGATGAGAATCCAGACATTGCATGTGGA...TTGGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCAAAATTGGCCAAGCAGGTaGAACATTTGCCTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: AAKSSSESQGQLLLHKNQNWPSR*NICLRR
Trigger: CCTTCTTAGGCAAATGTTCCACCTGCTTGGCCAATT...TTGGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TTCAGGAGTTTGAGAACCAGAACTGCTATATCCTTCCATGTCTTGCCTTCTTTGAGGCACCATCAAAACTaGATTTTGACTCTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: FRSLRTRTAISFHVLPSLRHHQN*ILTLGP
Trigger: AGGACCAAGAGTCAAAATCCAGTTTTGATGGTGCCT...CAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513978.5
CDS-3UTR TCA 90 bp GATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTTTTCTTCAAAGGGAAACATaGGGTATTCCGATGGCCCAA +
Preference number: 4 (lower is better)
Translates to: DVTCLKQTCPLRAIYCLFLQRET*GIPMAQ
Trigger: TTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAG...AAAAAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp TTATTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCCTCATGGCTAATTCTTaGAAGGACCACATTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LLHKNQNYFPPHFPELETLMANS*KDHIEF
Trigger: AAACTCAATGTGGTCCTTTCAAGAATTAGCCATGAG...GGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTTTTGCACAGGTAAAGCTTTaGTTCAGTGGTTCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: DVTCLKQTCPLRAIYCLFAQVKL*FSGSSV
Trigger: AACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGC...AAAAAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp AGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAATTAAAAGCCAGAGGTaGACCAGGCACAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SLSVYDVSFSLKVVKRGVIKSQR*TRHSCP
Trigger: TGGACAGCTGTGCCTGGTGCACCTCTGGCTTTTAAT...TACACCCCTCTTAACGACTTTCAAACTAAAGGATACATCATATACTGACAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CAAAATAAGTTTAATTTAGTACTTCAGTCACATGCCTCACAGATTCTTGACCAGATTAAAAGCCAGAGGTaGACCAGGCACAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: QNKFNLVLQSHASQILDQIKSQR*TRHSCP
Trigger: TGGACAGCTGTGCCTGGTGCACCTCTGGCTTTTAAT...CTGGTCAAGAATCTGTGAGGCATGTGACTGAAGTACTAAATTAAACTTATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTCAGCAGAAGATGGATTaGGACTGTTACCAACACTTG +
Preference number: 4 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLQQKMD*DCYQHL
Trigger: CAAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTG...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTTGGGATTCTGTCGCATaGAAATCTCGAGAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLWDSVA*KSREFS
Trigger: TGAGAACTCTCGAGATTTCCATGCGACAGAATCCCA...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AATGTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCTATGGGTGTCCACAATaGAGGTTAGTAACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: NVDVTCLKQTCPLRAIYCYGCPQ*RLVTPA
Trigger: AGCTGGGGTTACTAACCTCCATTGTGGACACCCATA...GCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp TTCAGTCTTAGGGTCATTTTTGCTTTCTGTTTTACAGTCGTTCTTATCACTTGCTATGGGTGTCCACAATaGAGGTTAGTAACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: FSLRVIFAFCFTVVLITCYGCPQ*RLVTPA
Trigger: AGCTGGGGTTACTAACCTCCATTGTGGACACCCATA...GCAAGTGATAAGAACGACTGTAAAACAGAAAGCAAAAATGACCCTAAGACTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513978.5
CDS-3UTR TCA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTAGAGAACCTCCACATTaGATTGTACTTGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLREPPH*IVLVTS
Trigger: TGAGGTCACAAGTACAATTCAATGTGGAGGTTCTCT...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp AAGCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCATGTATCCTTTAGTTTaGAAGTCGTTAAGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: KQQNLPQRVKVNFYCTRTMYPLV*KSLRGV
Trigger: CACCCCTCTTAACGACTTTCAAACTAAAGGATACAT...GGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp AAGCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCTTTGACTCTTGGTCCTaGATGAAGCATAGATTTGGA +
Preference number: 4 (lower is better)
Translates to: KQQNLPQRVKVNFYCTRTFDSWS*MKHRFG
Trigger: TCCAAATCTATGCTTCATTCAGGACCAAGAGTCAAA...GGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000542322.5
CDS-3UTR GCA 90 bp AACCAGAACTGCTATATCCTTCCATGTCTTGCCTTCTTTGTTGAACCACTCCATTTTGAGAACCAGAACTaGTATATCCTTCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: NQNCYILPCLAFFVEPLHFENQN*YILPCL
Trigger: AAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAA...ATGGAGTGGTTCAACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR GCA 90 bp AATGTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCAGCAGGTGGAACATTTaGCTAAGAAGGCACAATCTG +
Preference number: 4 (lower is better)
Translates to: NVDVTCLKQTCPLRAIYCSRWNI*LRRHNL
Trigger: CAGATTGTGCCTTCTTAGGCAAATGTTCCACCTGCT...GCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTTTTGCTTGTAGGACTTaGTGTCTCCTTGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLFACRT*CLLVIF
Trigger: GAAGATGACAAGGAGACAGCAAGTCCTACAAGCAAA...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR CCA 90 bp GCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCAAATATTGGCCTTGTACTaGCTGGAAGATGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: AAKSSSESQGQLLLHKNQILALY*LEDEDF
Trigger: AAAGTCTTCATCTTCCAGCCAGTACAAGGCCAATAT...TTGGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CCA 90 bp TTCAGTCTTAGGGTCATTTTTGCTTTCTGTTTTACAGTCGTTCTTATCACTTGCTGTGAAAGTGCATATTaGCCTTGTACTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FSLRVIFAFCFTVVLITCCESAY*PCTGWK
Trigger: CTTCCAGCCAGTACAAGGCCAATATGCACTTTCACA...GCAAGTGATAAGAACGACTGTAAAACAGAAAGCAAAAATGACCCTAAGACTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513978.5
CDS-3UTR CCA 90 bp AGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAAAAGCTTTGCTTCAGTaGTTCCTCCGTTGGGACACT +
Preference number: 4 (lower is better)
Translates to: SLSVYDVSFSLKVVKRGVKALLQ*FLRWDT
Trigger: AGTGTCCCAACGGAGGAACCACTGAAGCAAAGCTTT...TACACCCCTCTTAACGACTTTCAAACTAAAGGATACATCATATACTGACAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GTTTTCTTTATTAGGGTTACCGAGAAAGCTGGAATAGAGATCTTTGTGTCTTTTGTACAGGGAGACTCTTaGCTTTTCCTTCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: VFFIRVTEKAGIEIFVSFVQGDS*LFLQVL
Trigger: GAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTAC...AAAAGACACAAAGATCTCTATTCCAGCTTTCTCGGTAACCCTAATAAAGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp AGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAGTACAGGGAGACTCTTaGCTTTTCCTTCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: SLSVYDVSFSLKVVKRGVVQGDS*LFLQVL
Trigger: GAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTAC...TACACCCCTCTTAACGACTTTCAAACTAAAGGATACATCATATACTGACAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp CAAAATAAGTTTAATTTAGTACTTCAGTCACATGCCTCACAGATTCTTGACCAGTATGGGTGTCCACAATaGAGGTTAGTAACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QNKFNLVLQSHASQILDQYGCPQ*RLVTPA
Trigger: AGCTGGGGTTACTAACCTCCATTGTGGACACCCATA...CTGGTCAAGAATCTGTGAGGCATGTGACTGAAGTACTAAATTAAACTTATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AGGACCACATTGAGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTATGGCCCAAGCAATCTaGTCGATCAGTCACCATTCT +
Preference number: 4 (lower is better)
Translates to: RTTLSLSVYDVSFSLKVVMAQAI*SISHHS
Trigger: AGAATGGTGACTGATCGACCAGATTGCTTGGGCCAT...AACGACTTTCAAACTAAAGGATACATCATATACTGACAAACTCAATGTGGTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp AGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTATCTTGCCTTCTTTGTTaGACCACTCCATCCAGATCT +
Preference number: 4 (lower is better)
Translates to: SLSVYDVSFSLKVVKRGVSCLLC*TTPSRS
Trigger: AGATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGA...TACACCCCTCTTAACGACTTTCAAACTAAAGGATACATCATATACTGACAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTTTTTGTAGAAGGTCGAGATaGTTAGTGCACAGACAACAA +
Preference number: 4 (lower is better)
Translates to: DVTCLKQTCPLRAIYCLFCRRSR*LVHRQQ
Trigger: TTGTTGTCTGTGCACTAATCATCTCGACCTTCTACA...AAAAAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp AGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTATTAGCTGTAAGCTCTTaGCAGAGAACCTCCACATTG +
Preference number: 4 (lower is better)
Translates to: SLSVYDVSFSLKVVKRGVLAVSS*QRTSTL
Trigger: CAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAA...TACACCCCTCTTAACGACTTTCAAACTAAAGGATACATCATATACTGACAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCAATTGAAAGGACCACATTaGGTTTGTCAGTATATGATG +
Preference number: 4 (lower is better)
Translates to: AAKSSSESQGQLLLHKNQLKGPH*VCQYMM
Trigger: CATCATATACTGACAAACTCAATGTGGTCCTTTCAA...TTGGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GTTTTCTTTATTAGGGTTACCGAGAAAGCTGGAATAGAGATCTTTGTGTCTTTTCAGTGGTTCCTCCGTTaGGACACTAAGAAACAACTT +
Preference number: 4 (lower is better)
Translates to: VFFIRVTEKAGIEIFVSFQWFLR*DTKKQL
Trigger: AAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTG...AAAAGACACAAAGATCTCTATTCCAGCTTTCTCGGTAACCCTAATAAAGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp AGGACCACATTGAGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTGCCTGTTCAGTATTATaGGTGTCCACAATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RTTLSLSVYDVSFSLKVVACSVL*VSTMEV
Trigger: AACCTCCATTGTGGACACCCATAATACTGAACAGGC...AACGACTTTCAAACTAAAGGATACATCATATACTGACAAACTCAATGTGGTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTATCCACATGCAATGTCTaGATTCTCATCTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: SLSVYDVSFSLKVVKRGVSTCNV*ILICLH
Trigger: GTGCAAGCAGATGAGAATCCAGACATTGCATGTGGA...TACACCCCTCTTAACGACTTTCAAACTAAAGGATACATCATATACTGACAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp AGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTACTGAGAATTCATCATTaGAATCCAGAGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SLSVYDVSFSLKVVKRGVLRIHH*NPEAEM
Trigger: CATCTCTGCCTCTGGATTTCAATGATGAATTCTCAG...TACACCCCTCTTAACGACTTTCAAACTAAAGGATACATCATATACTGACAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp AGGACCACATTGAGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTCTGAGAATTCATCATTaGAATCCAGAGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: RTTLSLSVYDVSFSLKVVLRIHH*NPEAEM
Trigger: CATCTCTGCCTCTGGATTTCAATGATGAATTCTCAG...AACGACTTTCAAACTAAAGGATACATCATATACTGACAAACTCAATGTGGTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTTTTTCAGATTCAGGAGTTTaGGAACCAGAACTGCTATAT +
Preference number: 4 (lower is better)
Translates to: DVTCLKQTCPLRAIYCLFSDSGV*EPELLY
Trigger: ATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGA...AAAAAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp AATGTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCAGCATCGGACATTTCTaGGACTTGACTTTATGTAAG +
Preference number: 4 (lower is better)
Translates to: NVDVTCLKQTCPLRAIYCSIGHF*DLTLCK
Trigger: CTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCT...GCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR GCA 90 bp CAAAATAAGTTTAATTTAGTACTTCAGTCACATGCCTCACAGATTCTTGACCAGGTTAGTAACCCCAGCTaGTCCTCCAGAGTATTAATT +
Preference number: 4 (lower is better)
Translates to: QNKFNLVLQSHASQILDQVSNPS*SSRVLI
Trigger: AATTAATACTCTGGAGGAGCAGCTGGGGTTACTAAC...CTGGTCAAGAATCTGTGAGGCATGTGACTGAAGTACTAAATTAAACTTATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp AATGTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCATATTGGCCTTGTACTaGCTGGAAGATGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: NVDVTCLKQTCPLRAIYCILALY*LEDEDF
Trigger: AAAGTCTTCATCTTCCAGCCAGTACAAGGCCAATAT...GCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000542322.5
CDS-3UTR CCA 90 bp CAAAATAAGTTTAATTTAGTACTTCAGTCACATGCCTCACAGATTCTTGACCAGGGTTACCGAGAAAGCTaGAATAGAGATCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: QNKFNLVLQSHASQILDQGYRES*NRDLCV
Trigger: GACACAAAGATCTCTATTCCAGCTTTCTCGGTAACC...CTGGTCAAGAATCTGTGAGGCATGTGACTGAAGTACTAAATTAAACTTATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GTTTTCTTTATTAGGGTTACCGAGAAAGCTGGAATAGAGATCTTTGTGTCTTTTGTTTTCAGCAGAAGATaGATTGGGACTGTTACCAAC +
Preference number: 4 (lower is better)
Translates to: VFFIRVTEKAGIEIFVSFVFSRR*IGTVTN
Trigger: GTTGGTAACAGTCCCAATCCATCTTCTGCTGAAAAC...AAAAGACACAAAGATCTCTATTCCAGCTTTCTCGGTAACCCTAATAAAGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CCA 90 bp AGGACCACATTGAGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTGTTTTCAGCAGAAGATaGATTGGGACTGTTACCAAC +
Preference number: 4 (lower is better)
Translates to: RTTLSLSVYDVSFSLKVVVFSRR*IGTVTN
Trigger: GTTGGTAACAGTCCCAATCCATCTTCTGCTGAAAAC...AACGACTTTCAAACTAAAGGATACATCATATACTGACAAACTCAATGTGGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CCA 90 bp GATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTTTTACATTCAGAACTGTTTaGGATTCTGTCGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: DVTCLKQTCPLRAIYCLFTFRTV*DSVAWK
Trigger: TTTCCATGCGACAGAATCCCAAACAGTTCTGAATGT...AAAAAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR TCA 90 bp GATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTTTTAAGGAATTTACGAACTaGCAAAACACAGTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: DVTCLKQTCPLRAIYCLFKEFTN*QNTVLA
Trigger: TGCTAACACTGTGTTTTGTCAGTTCGTAAATTCCTT...AAAAAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285689.8
ENST00000515200.5
CDS-3UTR GCA 90 bp GACTGTTACCAACACTTGTATTTTCTAAGTGTCCACACACAGATTTTAGTAGTTTTTGAGAACCAGAACTaGTATATCCTTCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: DCYQHLYFLSVHTQILVVFENQN*YILPCL
Trigger: AAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAA...AACTACTAAAATCTGTGTGTGGACACTTAGAAAATACAAGTGTTGGTAACAGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR GCA 90 bp CAAAATAAGTTTAATTTAGTACTTCAGTCACATGCCTCACAGATTCTTGACCAGTTTGAGAACCAGAACTaGTATATCCTTCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: QNKFNLVLQSHASQILDQFENQN*YILPCL
Trigger: AAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAA...CTGGTCAAGAATCTGTGAGGCATGTGACTGAAGTACTAAATTAAACTTATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
3UTR CAA 72 bp GACTCATGGCTAATTCTTGAAAGGACCACATTGAGTTaGTCAGTATATGATGTATCCTTTAGTTTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: DSWLILERTTLS*SVYDVSFSLKV
Trigger: GACTTTCAAACTAAAGGATACATCATATACTGACAAACTCAATGTGGTCCTTTCAAGAATTAGCCATGAGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS GCA 90 bp TCCCGGCTTCTAGGTCCGGGTGCGCAGGCCAAGCAAGCGGCGCCGTaGCCTCCCCTGCACCCTCCGCCCAGCGCATCCAGGCCGGGCCGC +
Preference number: 5 (lower is better)
Translates to: SRLLGPGAQAKQAAP*PPLHPPPSASRPGR
Trigger: GCGGCCCGGCCTGGATGCGCTGGGCGGAGGGTGCAGGGGAGGGCACGGCGCCGCTTGCTTGGCCTGCGCACCCGGACCTAGAAGCCGGGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513913.5
ENST00000514932.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS GCA 90 bp GCGCGCCTGGCTCTGCCCCGGCTCGTCCCGGCTTCTAGGTCCGGGTaGGCAGGCCAAGCAAGCGGCGCCGTGCCCTCCCCTGCACCCTCC +
Preference number: 5 (lower is better)
Translates to: ARLALPRLVPASRSG*AGQASGAVPSPAPS
Trigger: GGAGGGTGCAGGGGAGGGCACGGCGCCGCTTGCTTGGCCTGCGCACCCGGACCTAGAAGCCGGGACGAGCCGGGGCAGAGCCAGGCGCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000285689.8
ENST00000505720.1
ENST00000513913.5
ENST00000513978.5
ENST00000514099.5
ENST00000514932.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS GCA 90 bp GGGCCGTGTCTGGAGGGCACCTTCAGACTTCCGCGCGCCTGGCTCTaGCCCGGCTCGTCCCGGCTTCTAGGTCCGGGTGCGCAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: GPCLEGTFRLPRAWL*PGSSRLLGPGAQAK
Trigger: CTTGGCCTGCGCACCCGGACCTAGAAGCCGGGACGAGCCGGGGCAGAGCCAGGCGCGCGGAAGTCTGAAGGTGCCCTCCAGACACGGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000285689.8
ENST00000505720.1
ENST00000513913.5
ENST00000513978.5
ENST00000514099.5
ENST00000514932.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGTCGGAGCGGGCGCGATaGGTCCGACCCACTGTGGAA +
Preference number: 5 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQSERAR*VRPTVE
Trigger: TTCCACAGTGGGTCGGACCAATCGCGCCCGCTCCGA...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTTCGGAGCGGGCGCGATaGGTCCGACCCACTGTGGAA +
Preference number: 5 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPSERAR*VRPTVE
Trigger: TTCCACAGTGGGTCGGACCAATCGCGCCCGCTCCGA...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCGGGCATCTGCCCGAGTaGGCTTTGCTTCTCCCTTGG +
Preference number: 5 (lower is better)
Translates to: SACTSDQQGALKQNASGSGHLPE*ALLLPW
Trigger: CCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCC...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS GCA 90 bp TCCCTCTTCCCGAGCACTTTCGCAGGCTTTGTGTCTTCCACATCTTaGTGTAGTTCAGTCATCGGGGCCGTGTCTGGAGGGCACCTTCAG +
Preference number: 5 (lower is better)
Translates to: SLFPSTFAGFVSSTS*CSSVIGAVSGGHLQ
Trigger: CTGAAGGTGCCCTCCAGACACGGCCCCGATGACTGAACTACAGCAAGATGTGGAAGACACAAAGCCTGCGAAAGTGCTCGGGAAGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000285689.8
ENST00000505720.1
ENST00000513913.5
ENST00000513978.5
ENST00000514099.5
ENST00000514932.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTTGGGCTGAGCCAAGTTaGCTCTCCCTCTTCCCGAGC +
Preference number: 5 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPWAEPS*LSLFPS
Trigger: GCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCA...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGAGATGGGGTAGGGGATaGGGCTGTTGGCGACCTGCA +
Preference number: 5 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQRWGRG*GCWRPA
Trigger: TGCAGGTCGCCAACAGCCCAATCCCCTACCCCATCT...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAGATGGGGTAGGGGATaGGGCTGTTGGCGACCTGCA +
Preference number: 5 (lower is better)
Translates to: TSDQQGALKQNASGSTFFRWGRG*GCWRPA
Trigger: TGCAGGTCGCCAACAGCCCAATCCCCTACCCCATCT...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAATGGGCTGAGCCAAGTTaGCTCTCCCTCTTCCCGAGC +
Preference number: 5 (lower is better)
Translates to: PAGCTQTKRLRKHLLQREWAEPS*LSLFPS
Trigger: GCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCA...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTTGGGCTGAGCCAAGTTaGCTCTCCCTCTTCCCGAGC +
Preference number: 5 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSWAEPS*LSLFPS
Trigger: GCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCA...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTAGATGGGGTAGGGGATaGGGCTGTTGGCGACCTGCA +
Preference number: 5 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSRWGRG*GCWRPA
Trigger: TGCAGGTCGCCAACAGCCCAATCCCCTACCCCATCT...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCAGATGGGGTAGGGGATaGGGCTGTTGGCGACCTGCA +
Preference number: 5 (lower is better)
Translates to: PHFPELETSTCNVWILICRWGRG*GCWRPA
Trigger: TGCAGGTCGCCAACAGCCCAATCCCCTACCCCATCT...GCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTCTGCCCGAGTTGGCTTaGCTTCTCCCTTGGAGACAT +
Preference number: 5 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPLPELA*LLPWRH
Trigger: ATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAG...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCCTGCCCGAGTTGGCTTaGCTTCTCCCTTGGAGACAT +
Preference number: 5 (lower is better)
Translates to: SACTSDQQGALKQNASGSLPELA*LLPWRH
Trigger: ATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAG...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAAGGGCATCTGCCCGAGTaGGCTTTGCTTCTCCCTTGG +
Preference number: 5 (lower is better)
Translates to: PAGCTQTKRLRKHLLQREGHLPE*ALLLPW
Trigger: CCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCC...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCAGCACAGGTAAAGCTTaGCTTCAGTGGTTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: ACTSDQQGALKQNASGSTSTGKA*LQWFLR
Trigger: ACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGCT...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGCTGCCCGAGTTGGCTTaGCTTCTCCCTTGGAGACAT +
Preference number: 5 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQLPELA*LLPWRH
Trigger: ATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAG...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GGATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCCTGCCCGAGTTGGCTTaGCTTCTCCCTTGGAGACAT +
Preference number: 5 (lower is better)
Translates to: GFSSACTSDQQGALKQNALPELA*LLPWRH
Trigger: ATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAG...GGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCCTGCCCGAGTTGGCTTaGCTTCTCCCTTGGAGACAT +
Preference number: 5 (lower is better)
Translates to: HRGNYPRECVRWALPETSLPELA*LLPWRH
Trigger: ATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAG...GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGATGGCACCAGCCGCACTaGAAACCCACATGTGTGAGA +
Preference number: 5 (lower is better)
Translates to: SSACTSDQQGALKQNASGWHQPH*KPTCVR
Trigger: TCTCACACATGTGGGTTTCAAGTGCGGCTGGTGCCA...TCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR CAA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTCCCAACCACAGCTCTTaGAGCCAGTTGGTGTGCTTT +
Preference number: 5 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPPNHSS*SQLVCF
Trigger: AAAGCACACCAACTGGCTCAAAGAGCTGTGGTTGGG...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR CAA 90 bp GCTTTGCTTCTCCCTTGGAGACATTCAGAACTGTTTGGGATTCTGTCGCATGGATGGGCTGAGCCAAGTTaGCTCTCCCTCTTCCCGAGC +
Preference number: 5 (lower is better)
Translates to: ALLLPWRHSELFGILSHGWAEPS*LSLFPS
Trigger: GCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCA...TCCATGCGACAGAATCCCAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp AGCACCTTCTTCAAAGGGAAACATGAGGTATTCCGATGGCCCAAGCAATCTGGTTGGGCTGAGCCAAGTTaGCTCTCCCTCTTCCCGAGC +
Preference number: 5 (lower is better)
Translates to: STFFKGKHEVFRWPKQSGWAEPS*LSLFPS
Trigger: GCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCA...ACCAGATTGCTTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAGAAGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTAGCACAGGTAAAGCTTaGCTTCAGTGGTTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPSTGKA*LQWFLR
Trigger: ACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGCT...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp AGCACCTTCTTCAAAGGGAAACATGAGGTATTCCGATGGCCCAAGCAATCTGGTGGGCATCTGCCCGAGTaGGCTTTGCTTCTCCCTTGG +
Preference number: 5 (lower is better)
Translates to: STFFKGKHEVFRWPKQSGGHLPE*ALLLPW
Trigger: CCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCC...ACCAGATTGCTTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAGAAGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp ACTTGGGAGGAAGGAAGTATAAGTGAGTTGGTAGTAGTAGATGGCAGGTGGAAATCGGAGCGGGCGCGATaGGTCCGACCCACTGTGGAA +
Preference number: 5 (lower is better)
Translates to: TWEEGSISELVVVDGRWKSERAR*VRPTVE
Trigger: TTCCACAGTGGGTCGGACCAATCGCGCCCGCTCCGA...TTTCCACCTGCCATCTACTACTACCAACTCACTTATACTTCCTTCCTCCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515200.5
CDS-3UTR CAA 90 bp CATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCGGACTTGCTGTCTCCTaGTCATCTTCTAGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: HRGNYPRECVRWALPETSGLAVS*SSSRGQ
Trigger: CTGGCCTCTAGAAGATGACAAGGAGACAGCAAGTCC...GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR CAA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCAAGATGGGGTAGGGGATaGGGCTGTTGGCGACCTGCA +
Preference number: 5 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPRWGRG*GCWRPA
Trigger: TGCAGGTCGCCAACAGCCCAATCCCCTACCCCATCT...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCAGCACAGGTAAAGCTTaGCTTCAGTGGTTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: PELETSTCNVWILICLHLSTGKA*LQWFLR
Trigger: ACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGCT...GAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCGTCTTGCCTTCTTTGTaGAACCACTCCATCCAGATC +
Preference number: 5 (lower is better)
Translates to: CTSDQQGALKQNASGSTFVLPSL*NHSIQI
Trigger: GATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGAC...GAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCAGGGCATCTGCCCGAGTaGGCTTTGCTTCTCCCTTGG +
Preference number: 5 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPGHLPE*ALLLPW
Trigger: CCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCC...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GGCCCAAGCAATCTGGTCGATCAGTCACCATTCTCAAGCAACTTCTGTAAGTTAGGGCATCTGCCCGAGTaGGCTTTGCTTCTCCCTTGG +
Preference number: 5 (lower is better)
Translates to: GPSNLVDQSPFSSNFCKLGHLPE*ALLLPW
Trigger: CCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCC...TAACTTACAGAAGTTGCTTGAGAATGGTGACTGATCGACCAGATTGCTTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTAGCTCTTTGAGCCAGTaGGTGTGCTTTTCGCTCACA +
Preference number: 5 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPSSLSQ*VCFSLT
Trigger: TGTGAGCGAAAAGCACACCAACTGGCTCAAAGAGCT...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR CAA 90 bp GGAGTGTTTGCTGACGCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGGCACTTTCGCAGGCTTaGTGTCTTCCACATCTTGCT +
Preference number: 5 (lower is better)
Translates to: GVFADAIVVIIQESVFAGALSQA*CLPHLA
Trigger: AGCAAGATGTGGAAGACACAAAGCCTGCGAAAGTGC...CCCAGCGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCAAGTGCATATTGGCCTaGTACTGGCTGGAAGATGAA +
Preference number: 5 (lower is better)
Translates to: CTSDQQGALKQNASGSTFKCILA*YWLEDE
Trigger: TTCATCTTCCAGCCAGTACAAGGCCAATATGCACTT...GAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CAA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTAGCACAGGTAAAGCTTaGCTTCAGTGGTTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSSTGKA*LQWFLR
Trigger: ACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGCT...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGCATGTCTTGCCTTCTTaGTTGAACCACTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQHVLPS*LNHSIQ
Trigger: CTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATG...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCCATGTCTTGCCTTCTTaGTTGAACCACTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: TSDQQGALKQNASGSTFFHVLPS*LNHSIQ
Trigger: CTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATG...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCCTCAGATTCAGGAGTTaGAGAACCAGAACTGCTATA +
Preference number: 5 (lower is better)
Translates to: ACTSDQQGALKQNASGSTLRFRS*RTRTAI
Trigger: TATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAG...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCAGACATTCAGAACTGTTaGGGATTCTGTCGCATGGAA +
Preference number: 5 (lower is better)
Translates to: LLAPLTSRVHSNKTPQEADIQNC*GFCRME
Trigger: TTCCATGCGACAGAATCCCAAACAGTTCTGAATGTC...TGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp AACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGGGCATCTGCCCGAGTaGGCTTTGCTTCTCCCTTGG +
Preference number: 5 (lower is better)
Translates to: NQNYFPPHFPELETSTCNGHLPE*ALLLPW
Trigger: CCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCC...ATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GACATTCAGAACTGTTTGGGATTCTGTCGCATGGAAATCTCGAGAGTTCTCAGAGGGCATCTGCCCGAGTaGGCTTTGCTTCTCCCTTGG +
Preference number: 5 (lower is better)
Translates to: DIQNCLGFCRMEISRVLRGHLPE*ALLLPW
Trigger: CCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCC...TCTGAGAACTCTCGAGATTTCCATGCGACAGAATCCCAAACAGTTCTGAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp CTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACAGAGAACCTCCACATaGAATTGTACTTGTGACCTC +
Preference number: 5 (lower is better)
Translates to: LLAPLTSRVHSNKTPQEAQRTST*NCTCDL
Trigger: GAGGTCACAAGTACAATTCAATGTGGAGGTTCTCTG...TGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCAGGAAGTATAAGTGAGTaGGTAGTAGTAGATGGCAGG +
Preference number: 5 (lower is better)
Translates to: LLAPLTSRVHSNKTPQEAGSISE*VVVDGR
Trigger: CCTGCCATCTACTACTACCAACTCACTTATACTTCC...TGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285689.8
ENST00000515200.5
CDS-3UTR CAA 90 bp TCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAAGGGAGAGGCAGGAGGGCGGGGCTGAATGCTCCTTTTaGCTTGTAGGACTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: SFSLKVVKRGVRERQEGGAECSF*LVGLAV
Trigger: GACAGCAAGTCCTACAAGCAAAAAGGAGCATTCAGC...CCCGCCCTCCTGCCTCTCCCTTACACCCCTCTTAACGACTTTCAAACTAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR CAA 90 bp CTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACTGTGCTTGGAATGTTaGCTGAATGCTCCTTTTTGC +
Preference number: 5 (lower is better)
Translates to: LLAPLTSRVHSNKTPQEALCLEC*LNAPFC
Trigger: GCAAAAAGGAGCATTCAGCAAACATTCCAAGCACAG...TGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS GCA 90 bp TTTTCGCTCACAAGTGCTATCTCAGAAGTTTTCTCTTTCAGCGTCTaGTCAGAGGGATGGCACCAGCCGCACTTGAAACCCACATGTGTG +
Preference number: 5 (lower is better)
Translates to: FSLTSAISEVFSFSV*SEGWHQPHLKPTCV
Trigger: CACACATGTGGGTTTCAAGTGCGGCTGGTGCCATCCCTCTGAGCAGACGCTGAAAGAGAAAACTTCTGAGATAGCACTTGTGAGCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR CAA 90 bp CACCAGGCACAGCTGTCCACTAGGCCAACAGATACAAACGATGTAACCAATTCGGCACTTTCGCAGGCTTaGTGTCTTCCACATCTTGCT +
Preference number: 5 (lower is better)
Translates to: HQAQLSTRPTDTNDVTNSALSQA*CLPHLA
Trigger: AGCAAGATGTGGAAGACACAAAGCCTGCGAAAGTGC...CGAATTGGTTACATCGTTTGTATCTGTTGGCCTAGTGGACAGCTGTGCCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCAGTCGTTCTTATCACTaGCTAAAGAGGCACCATCAA +
Preference number: 5 (lower is better)
Translates to: SACTSDQQGALKQNASGSSRSYH*LKRHHQ
Trigger: TTGATGGTGCCTCTTTAGCAAGTGATAAGAACGACT...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CAA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTAAGTGCATATTGGCCTaGTACTGGCTGGAAGATGAA +
Preference number: 5 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPKCILA*YWLEDE
Trigger: TTCATCTTCCAGCCAGTACAAGGCCAATATGCACTT...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CAA 90 bp GGATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGCAGAAGATGGATaGGGACTGTTACCAACACTT +
Preference number: 5 (lower is better)
Translates to: GFSSACTSDQQGALKQNASAEDG*GLLPTL
Trigger: AAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTGA...GGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAAGGGAGAGGCAGGAGGGCGGGTCAGCAGAAGATGGATaGGGACTGTTACCAACACTT +
Preference number: 5 (lower is better)
Translates to: SFSLKVVKRGVRERQEGGSAEDG*GLLPTL
Trigger: AAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTGA...CCCGCCCTCCTGCCTCTCCCTTACACCCCTCTTAACGACTTTCAAACTAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGATCAGCAGAAGATGGATaGGGACTGTTACCAACACTT +
Preference number: 5 (lower is better)
Translates to: SSACTSDQQGALKQNASGSAEDG*GLLPTL
Trigger: AAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTGA...TCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GGAGTGTTTGCTGACGCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGGTCTTGCCTTCTTTGTaGAACCACTCCATCCAGATC +
Preference number: 5 (lower is better)
Translates to: GVFADAIVVIIQESVFAGVLPSL*NHSIQI
Trigger: GATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGAC...CCCAGCGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GGCATCTGCCCGAGTTGGCTTTGCTTCTCCCTTGGAGACATTCAGAACTGTTTGGTCTTGCCTTCTTTGTaGAACCACTCCATCCAGATC +
Preference number: 5 (lower is better)
Translates to: GICPSWLCFSLGDIQNCLVLPSL*NHSIQI
Trigger: GATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGAC...CAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp CCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCCATGTCTTGCCTTCTTaGTTGAACCACTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: PHFPELETSTCNVWILICHVLPS*LNHSIQ
Trigger: CTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATG...GCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCCATGTCTTGCCTTCTTaGTTGAACCACTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: PPHFPELETSTCNVWILIHVLPS*LNHSIQ
Trigger: CTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATG...GATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp ATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCACATGTCTTGCCTTCTTaGTTGAACCACTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: IVVIIQESVFAGPFLRPPHVLPS*LNHSIQ
Trigger: CTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATG...TGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCATATCCTTCCATGTCTaGCCTTCTTTGTTGAACCAC +
Preference number: 5 (lower is better)
Translates to: CTSDQQGALKQNASGSTFISFHV*PSLLNH
Trigger: GTGGTTCAACAAAGAAGGCAAGACATGGAAGGATAT...GAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCCTCAGATTCAGGAGTTaGAGAACCAGAACTGCTATA +
Preference number: 5 (lower is better)
Translates to: SACTSDQQGALKQNASGSLRFRS*RTRTAI
Trigger: TATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAG...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACTCAGATTCAGGAGTTaGAGAACCAGAACTGCTATA +
Preference number: 5 (lower is better)
Translates to: LLAPLTSRVHSNKTPQEALRFRS*RTRTAI
Trigger: TATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAG...TGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGACATTCAGAACTGTTaGGGATTCTGTCGCATGGAA +
Preference number: 5 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQDIQNC*GFCRME
Trigger: TTCCATGCGACAGAATCCCAAACAGTTCTGAATGTC...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTGACATTCAGAACTGTTaGGGATTCTGTCGCATGGAA +
Preference number: 5 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPDIQNC*GFCRME
Trigger: TTCCATGCGACAGAATCCCAAACAGTTCTGAATGTC...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCCTGCCCGAGTTGGCTTaGCTTCTCCCTTGGAGACAT +
Preference number: 5 (lower is better)
Translates to: LHKNQNYFPPHFPELETSLPELA*LLPWRH
Trigger: ATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAG...GGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAATGTACAGGGAGACTCTaGGCTTTTCCTTCAGGTACT +
Preference number: 5 (lower is better)
Translates to: PAGCTQTKRLRKHLLQRECTGRL*AFPSGT
Trigger: AGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACA...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTTGTACAGGGAGACTCTaGGCTTTTCCTTCAGGTACT +
Preference number: 5 (lower is better)
Translates to: DSHLLAPLTSRVHSNKTPCTGRL*AFPSGT
Trigger: AGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACA...AGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CTGTTCACATGGGCATCTGCCCGAGTTGGCTTTGCTTCTCCCTTGGAGACATTCCAGAGAACCTCCACATaGAATTGTACTTGTGACCTC +
Preference number: 5 (lower is better)
Translates to: LFTWASARVGFASPLETFQRTST*NCTCDL
Trigger: GAGGTCACAAGTACAATTCAATGTGGAGGTTCTCTG...GAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGCAGAGAACCTCCACATaGAATTGTACTTGTGACCTC +
Preference number: 5 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQQRTST*NCTCDL
Trigger: GAGGTCACAAGTACAATTCAATGTGGAGGTTCTCTG...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCCAGAGAACCTCCACATaGAATTGTACTTGTGACCTC +
Preference number: 5 (lower is better)
Translates to: HRGNYPRECVRWALPETSQRTST*NCTCDL
Trigger: GAGGTCACAAGTACAATTCAATGTGGAGGTTCTCTG...GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCGTTAGCTGTAAGCTCTaGACAGAGAACCTCCACATT +
Preference number: 5 (lower is better)
Translates to: TSDQQGALKQNASGSTFFVSCKL*TENLHI
Trigger: AATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAAC...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCGTTAGCTGTAAGCTCTaGACAGAGAACCTCCACATT +
Preference number: 5 (lower is better)
Translates to: PELETSTCNVWILICLHLVSCKL*TENLHI
Trigger: AATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAAC...GAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp AATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGAGATGGGGTTAGCTGTAAGCTCTaGACAGAGAACCTCCACATT +
Preference number: 5 (lower is better)
Translates to: NYPRECVRWALPETSRDGVSCKL*TENLHI
Trigger: AATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAAC...CCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCAGGACCACATTGAGTTaGTCAGTATATGATGTATCC +
Preference number: 5 (lower is better)
Translates to: ACTSDQQGALKQNASGSTRTTLS*SVYDVS
Trigger: GGATACATCATATACTGACAAACTCAATGTGGTCCT...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCGAAAAAGGAAACCTGTaGAACGAGTCTTTCGGGAGA +
Preference number: 5 (lower is better)
Translates to: HRGNYPRECVRWALPETSEKGNL*NESFGR
Trigger: TCTCCCGAAAGACTCGTTCAACAGGTTTCCTTTTTC...GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAGAAAAAGGAAACCTGTaGAACGAGTCTTTCGGGAGA +
Preference number: 5 (lower is better)
Translates to: SSACTSDQQGALKQNASGEKGNL*NESFGR
Trigger: TCTCCCGAAAGACTCGTTCAACAGGTTTCCTTTTTC...TCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGTGTCGGGAAGGAACTTaGTATTTACACCAGATCTGC +
Preference number: 5 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQCREGT*YLHQIC
Trigger: GCAGATCTGGTGTAAATACAAAGTTCCTTCCCGACA...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR CAA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTGGGCATAAGCTGTGCTaGGAATGTTTGCTGAATGCT +
Preference number: 5 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSGHKLC*ECLLNA
Trigger: AGCATTCAGCAAACATTCCAAGCACAGCTTATGCCC...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS GCA 90 bp CAACCACAGCTCTTTGAGCCAGTTGGTGTGCTTTTCGCTCACAAGTaGTATCTCAGAAGTTTTCTCTTTCAGCGTCTGCTCAGAGGGATG +
Preference number: 5 (lower is better)
Translates to: QPQLFEPVGVLFAHK*YLRSFLFQRLLRGM
Trigger: CATCCCTCTGAGCAGACGCTGAAAGAGAAAACTTCTGAGATAGCACTTGTGAGCGAAAAGCACACCAACTGGCTCAAAGAGCTGTGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR CAA 90 bp AGCACCTTCTTCAAAGGGAAACATGAGGTATTCCGATGGCCCAAGCAATCTGGTGCACTTTCGCAGGCTTaGTGTCTTCCACATCTTGCT +
Preference number: 5 (lower is better)
Translates to: STFFKGKHEVFRWPKQSGALSQA*CLPHLA
Trigger: AGCAAGATGTGGAAGACACAAAGCCTGCGAAAGTGC...ACCAGATTGCTTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAGAAGGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCAAAGATGGGGTAGGGGATaGGGCTGTTGGCGACCTGCA +
Preference number: 5 (lower is better)
Translates to: AAKSSSESQGQLLLHKNQRWGRG*GCWRPA
Trigger: TGCAGGTCGCCAACAGCCCAATCCCCTACCCCATCT...TTGGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TATTATGGGTGTCCACAATGGAGGTTAGTAACCCCAGCTGCTCCTCCAGAGTATAGCACAGGTAAAGCTTaGCTTCAGTGGTTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: YYGCPQWRLVTPAAPPEYSTGKA*LQWFLR
Trigger: ACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGCT...ATACTCTGGAGGAGCAGCTGGGGTTACTAACCTCCATTGTGGACACCCATAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp GGCATCTGCCCGAGTTGGCTTTGCTTCTCCCTTGGAGACATTCAGAACTGTTTGTCAGCAGAAGATGGATaGGGACTGTTACCAACACTT +
Preference number: 5 (lower is better)
Translates to: GICPSWLCFSLGDIQNCLSAEDG*GLLPTL
Trigger: AAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTGA...CAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp CTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTGTCTTGCCTTCTTTGTaGAACCACTCCATCCAGATC +
Preference number: 5 (lower is better)
Translates to: LTFLSWRPPHAMSGFSSAVLPSL*NHSIQI
Trigger: GATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGAC...AGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GGCGGTCTGCTCGGAAACTGTTTTCAGCAGAAGATGGATTGGGACTGTTACCAACATGTCTTGCCTTCTTaGTTGAACCACTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: GGLLGNCFQQKMDWDCYQHVLPS*LNHSIQ
Trigger: CTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATG...TTGGTAACAGTCCCAATCCATCTTCTGCTGAAAACAGTTTCCGAGCAGACCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp CTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTCATGTCTTGCCTTCTTaGTTGAACCACTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: LTFLSWRPPHAMSGFSSAHVLPS*LNHSIQ
Trigger: CTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATG...AGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCATATCCTTCCATGTCTaGCCTTCTTTGTTGAACCAC +
Preference number: 5 (lower is better)
Translates to: PELETSTCNVWILICLHLISFHV*PSLLNH
Trigger: GTGGTTCAACAAAGAAGGCAAGACATGGAAGGATAT...GAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTATATCCTTCCATGTCTaGCCTTCTTTGTTGAACCAC +
Preference number: 5 (lower is better)
Translates to: AIVVIIQESVFAGPFLRPISFHV*PSLLNH
Trigger: GTGGTTCAACAAAGAAGGCAAGACATGGAAGGATAT...AGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAATATCCTTCCATGTCTaGCCTTCTTTGTTGAACCAC +
Preference number: 5 (lower is better)
Translates to: SSACTSDQQGALKQNASGISFHV*PSLLNH
Trigger: GTGGTTCAACAAAGAAGGCAAGACATGGAAGGATAT...TCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGACTCAGATTCAGGAGTTaGAGAACCAGAACTGCTATA +
Preference number: 5 (lower is better)
Translates to: SSACTSDQQGALKQNASGLRFRS*RTRTAI
Trigger: TATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAG...TCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGCTCAGATTCAGGAGTTaGAGAACCAGAACTGCTATA +
Preference number: 5 (lower is better)
Translates to: SHLLAPLTSRVHSNKTPQLRFRS*RTRTAI
Trigger: TATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAG...CTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTGACATTCAGAACTGTTaGGGATTCTGTCGCATGGAA +
Preference number: 5 (lower is better)
Translates to: DSHLLAPLTSRVHSNKTPDIQNC*GFCRME
Trigger: TTCCATGCGACAGAATCCCAAACAGTTCTGAATGTC...AGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGTACAGGGAGACTCTaGGCTTTTCCTTCAGGTACT +
Preference number: 5 (lower is better)
Translates to: LTFLSWRPPHAMSGFSSACTGRL*AFPSGT
Trigger: AGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACA...AGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCTGTACAGGGAGACTCTaGGCTTTTCCTTCAGGTACT +
Preference number: 5 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACCTGRL*AFPSGT
Trigger: AGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACA...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTGTTAGCTGTAAGCTCTaGACAGAGAACCTCCACATT +
Preference number: 5 (lower is better)
Translates to: DSHLLAPLTSRVHSNKTPVSCKL*TENLHI
Trigger: AATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAAC...AGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GCAGAGATGAAGGGCGGTCTGCTCGGAAACTGTTTTCAGCAGAAGATGGATTGGGTTAGCTGTAAGCTCTaGACAGAGAACCTCCACATT +
Preference number: 5 (lower is better)
Translates to: AEMKGGLLGNCFQQKMDWVSCKL*TENLHI
Trigger: AATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAAC...CCAATCCATCTTCTGCTGAAAACAGTTTCCGAGCAGACCGCCCTTCATCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp TCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCAGGACCACATTGAGTTaGTCAGTATATGATGTATCC +
Preference number: 5 (lower is better)
Translates to: SACTSDQQGALKQNASGSRTTLS*SVYDVS
Trigger: GGATACATCATATACTGACAAACTCAATGTGGTCCT...GCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTAGGACCACATTGAGTTaGTCAGTATATGATGTATCC +
Preference number: 5 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPRTTLS*SVYDVS
Trigger: GGATACATCATATACTGACAAACTCAATGTGGTCCT...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCCTTGAAAGGACCACATaGAGTTTGTCAGTATATGAT +
Preference number: 5 (lower is better)
Translates to: ACTSDQQGALKQNASGSTLERTT*SLSVYD
Trigger: ATCATATACTGACAAACTCAATGTGGTCCTTTCAAG...GGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTGTAGATGTTACTTGTTaGAAGCAAACCTGTCCACTT +
Preference number: 5 (lower is better)
Translates to: LAPLTSRVHSNKTPQEAPVDVTC*KQTCPL
Trigger: AAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC...AGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTAAGCAGGTGGAACATTaGCCTAAGAAGGCACAATCT +
Preference number: 5 (lower is better)
Translates to: DSHLLAPLTSRVHSNKTPKQVEH*PKKAQS
Trigger: AGATTGTGCCTTCTTAGGCAAATGTTCCACCTGCTT...AGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GGAGTGTTTGCTGACGCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGAAGCAGGTGGAACATTaGCCTAAGAAGGCACAATCT +
Preference number: 5 (lower is better)
Translates to: GVFADAIVVIIQESVFAGKQVEH*PKKAQS
Trigger: AGATTGTGCCTTCTTAGGCAAATGTTCCACCTGCTT...CCCAGCGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS TCA 90 bp CGACCTGCAGGCTTTCTTTTTCTCCTCCACACCATTCTCAGCCTCTaGGCTGAAGAAGAAAGGAAACCGCTTCACTTTAGACATTCAGAG +
Preference number: 5 (lower is better)
Translates to: RPAGFLFLLHTILSL*AEEERKPLHFRHSE
Trigger: CTCTGAATGTCTAAAGTGAAGCGGTTTCCTTTCTTCTTCAGCTCAGAGGCTGAGAATGGTGTGGAGGAGAAAAAGAAAGCCTGCAGGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000505441.1
ENST00000505720.1
ENST00000511134.1
ENST00000514932.5
CDS-3UTR CAA 90 bp GGAGTGTTTGCTGACGCCATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGAGTCGTTCTTATCACTaGCTAAAGAGGCACCATCAA +
Preference number: 5 (lower is better)
Translates to: GVFADAIVVIIQESVFAGSRSYH*LKRHHQ
Trigger: TTGATGGTGCCTCTTTAGCAAGTGATAAGAACGACT...CCCAGCGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CAA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCGTCTTAGGGTCATTTTaGCTTTCTGTTTTACAGTCG +
Preference number: 5 (lower is better)
Translates to: TSDQQGALKQNASGSTFFVLGSF*LSVLQS
Trigger: CGACTGTAAAACAGAAAGCAAAAATGACCCTAAGAC...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CAA 90 bp CATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCGTCTTAGGGTCATTTTaGCTTTCTGTTTTACAGTCG +
Preference number: 5 (lower is better)
Translates to: HRGNYPRECVRWALPETSVLGSF*LSVLQS
Trigger: CGACTGTAAAACAGAAAGCAAAAATGACCCTAAGAC...GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CAA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTGGGCATCTGCCCGAGTaGGCTTTGCTTCTCCCTTGG +
Preference number: 5 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLGHLPE*ALLLPW
Trigger: CCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCC...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CACCAGGCACAGCTGTCCACTAGGCCAACAGATACAAACGATGTAACCAATTCGGTTAGCTGTAAGCTCTaGACAGAGAACCTCCACATT +
Preference number: 5 (lower is better)
Translates to: HQAQLSTRPTDTNDVTNSVSCKL*TENLHI
Trigger: AATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAAC...CGAATTGGTTACATCGTTTGTATCTGTTGGCCTAGTGGACAGCTGTGCCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp AATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAGAGATGGGGATGTATCCTTTAGTTaGAAAGTCGTTAAGAGGGGT +
Preference number: 5 (lower is better)
Translates to: NYPRECVRWALPETSRDGDVSFS*KVVKRG
Trigger: ACCCCTCTTAACGACTTTCAAACTAAAGGATACATC...CCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GGATTCTCATCTGCTTGCACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCGATGTATCCTTTAGTTaGAAAGTCGTTAAGAGGGGT +
Preference number: 5 (lower is better)
Translates to: GFSSACTSDQQGALKQNADVSFS*KVVKRG
Trigger: ACCCCTCTTAACGACTTTCAAACTAAAGGATACATC...GGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTAAGCAGGTGGAACATTaGCCTAAGAAGGCACAATCT +
Preference number: 5 (lower is better)
Translates to: LTFLSWRPPHAMSGFSSAKQVEH*PKKAQS
Trigger: AGATTGTGCCTTCTTAGGCAAATGTTCCACCTGCTT...AGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS TCA 90 bp GAAGGAACTTTGTATTTACACCAGATCTGCCCAACCACAGCTCTTTaGGCCAGTTGGTGTGCTTTTCGCTCACAAGTGCTATCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: EGTLYLHQICPTTAL*ASWCAFRSQVLSQK
Trigger: CTTCTGAGATAGCACTTGTGAGCGAAAAGCACACCAACTGGCTCAAAGAGCTGTGGTTGGGCAGATCTGGTGTAAATACAAAGTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS GCA 90 bp TTTACACCAGATCTGCCCAACCACAGCTCTTTGAGCCAGTTGGTGTaGTTTTCGCTCACAAGTGCTATCTCAGAAGTTTTCTCTTTCAGC +
Preference number: 5 (lower is better)
Translates to: FTPDLPNHSSLSQLV*FSLTSAISEVFSFS
Trigger: GCTGAAAGAGAAAACTTCTGAGATAGCACTTGTGAGCGAAAAGCACACCAACTGGCTCAAAGAGCTGTGGTTGGGCAGATCTGGTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR CAA 90 bp CCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCGTCTTAGGGTCATTTTaGCTTTCTGTTTTACAGTCG +
Preference number: 5 (lower is better)
Translates to: PHFPELETSTCNVWILICVLGSF*LSVLQS
Trigger: CGACTGTAAAACAGAAAGCAAAAATGACCCTAAGAC...GCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CAA 90 bp AGCACCTTCTTCAAAGGGAAACATGAGGTATTCCGATGGCCCAAGCAATCTGGTAAGTGCATATTGGCCTaGTACTGGCTGGAAGATGAA +
Preference number: 5 (lower is better)
Translates to: STFFKGKHEVFRWPKQSGKCILA*YWLEDE
Trigger: TTCATCTTCCAGCCAGTACAAGGCCAATATGCACTT...ACCAGATTGCTTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAGAAGGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CAA 90 bp ACTTGGGAGGAAGGAAGTATAAGTGAGTTGGTAGTAGTAGATGGCAGGTGGAAAAGCACAGGTAAAGCTTaGCTTCAGTGGTTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: TWEEGSISELVVVDGRWKSTGKA*LQWFLR
Trigger: ACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGCT...TTTCCACCTGCCATCTACTACTACCAACTCACTTATACTTCCTTCCTCCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285689.8
ENST00000515200.5
CDS-3UTR CAA 90 bp TTGAATTGTACTTGTGACCTCAGGCCAGATGGTGCTGCCTGTTCAGTATTATGGGTCTTGCCTTCTTTGTaGAACCACTCCATCCAGATC +
Preference number: 5 (lower is better)
Translates to: LNCTCDLRPDGAACSVLWVLPSL*NHSIQI
Trigger: GATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGAC...CCATAATACTGAACAGGCAGCACCATCTGGCCTGAGGTCACAAGTACAATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp CTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTCTCAGATTCAGGAGTTaGAGAACCAGAACTGCTATA +
Preference number: 5 (lower is better)
Translates to: LTFLSWRPPHAMSGFSSALRFRS*RTRTAI
Trigger: TATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAG...AGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GCTTTGCTTCTCCCTTGGAGACATTCAGAACTGTTTGGGATTCTGTCGCATGGAGACATTCAGAACTGTTaGGGATTCTGTCGCATGGAA +
Preference number: 5 (lower is better)
Translates to: ALLLPWRHSELFGILSHGDIQNC*GFCRME
Trigger: TTCCATGCGACAGAATCCCAAACAGTTCTGAATGTC...TCCATGCGACAGAATCCCAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp TTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCTGTACAGGGAGACTCTaGGCTTTTCCTTCAGGTACT +
Preference number: 5 (lower is better)
Translates to: LHKNQNYFPPHFPELETSCTGRL*AFPSGT
Trigger: AGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACA...GGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCATGTACAGGGAGACTCTaGGCTTTTCCTTCAGGTACT +
Preference number: 5 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPCTGRL*AFPSGT
Trigger: AGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACA...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCACCTCTGATGTATCCTTTAGTTaGAAAGTCGTTAAGAGGGGT +
Preference number: 5 (lower is better)
Translates to: LSWRPPHAMSGFSSACTSDVSFS*KVVKRG
Trigger: ACCCCTCTTAACGACTTTCAAACTAAAGGATACATC...AGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp ATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCAAGGACCACATTGAGTTaGTCAGTATATGATGTATCC +
Preference number: 5 (lower is better)
Translates to: IVVIIQESVFAGPFLRPPRTTLS*SVYDVS
Trigger: GGATACATCATATACTGACAAACTCAATGTGGTCCT...TGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CATCGTGGTAATTATCCAAGAGAGTGTGTTCGCTGGGCCCTTCCTGAGACCTCCCCATTTATTGCCTTTTaGAGACTCATGGCTAATTCT +
Preference number: 5 (lower is better)
Translates to: HRGNYPRECVRWALPETSPFIAF*RLMANS
Trigger: AGAATTAGCCATGAGTCTCAAAAAGGCAATAAATGG...GGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp ACCTCTGACCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCCCATTTATTGCCTTTTaGAGACTCATGGCTAATTCT +
Preference number: 5 (lower is better)
Translates to: TSDQQGALKQNASGSTFFPFIAF*RLMANS
Trigger: AGAATTAGCCATGAGTCTCAAAAAGGCAATAAATGG...GAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp AGCACCTTCTTCAAAGGGAAACATGAGGTATTCCGATGGCCCAAGCAATCTGGTGGAAGTATAAGTGAGTaGGTAGTAGTAGATGGCAGG +
Preference number: 5 (lower is better)
Translates to: STFFKGKHEVFRWPKQSGGSISE*VVVDGR
Trigger: CCTGCCATCTACTACTACCAACTCACTTATACTTCC...ACCAGATTGCTTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAGAAGGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285689.8
ENST00000515200.5
CDS TCA 90 bp TGGAACATACTCTTCCAGGGCATAAGCTGTGCTTGGAATGTTTGCTaGATGCTCCTTTTTGCTTGTAGGACTTGCTGTCTCCTTGTCATC +
Preference number: 5 (lower is better)
Translates to: WNILFQGISCAWNVC*MLLFACRTCCLLVI
Trigger: GATGACAAGGAGACAGCAAGTCCTACAAGCAAAAAGGAGCATTCAGCAAACATTCCAAGCACAGCTTATGCCCTGGAAGAGTATGTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS-3UTR CAA 90 bp CAAAATAAGTTTAATTTAGTACTTCAGTCACATGCCTCACAGATTCTTGACCAGTGGGCTGAGCCAAGTTaGCTCTCCCTCTTCCCGAGC +
Preference number: 5 (lower is better)
Translates to: QNKFNLVLQSHASQILDQWAEPS*LSLFPS
Trigger: GCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCA...CTGGTCAAGAATCTGTGAGGCATGTGACTGAAGTACTAAATTAAACTTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp AGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAAGATGGGGTAGGGGATaGGGCTGTTGGCGACCTGCA +
Preference number: 5 (lower is better)
Translates to: SLSVYDVSFSLKVVKRGVRWGRG*GCWRPA
Trigger: TGCAGGTCGCCAACAGCCCAATCCCCTACCCCATCT...TACACCCCTCTTAACGACTTTCAAACTAAAGGATACATCATATACTGACAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp AGGACCACATTGAGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTAGATGGGGTAGGGGATaGGGCTGTTGGCGACCTGCA +
Preference number: 5 (lower is better)
Translates to: RTTLSLSVYDVSFSLKVVRWGRG*GCWRPA
Trigger: TGCAGGTCGCCAACAGCCCAATCCCCTACCCCATCT...AACGACTTTCAAACTAAAGGATACATCATATACTGACAAACTCAATGTGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TCATCATTGAAATCCAGAGGCAGAGATGAAGGGCGGTCTGCTCGGAAACTGTTTAGTCGTTCTTATCACTaGCTAAAGAGGCACCATCAA +
Preference number: 5 (lower is better)
Translates to: SSLKSRGRDEGRSARKLFSRSYH*LKRHHQ
Trigger: TTGATGGTGCCTCTTTAGCAAGTGATAAGAACGACT...AAACAGTTTCCGAGCAGACCGCCCTTCATCTCTGCCTCTGGATTTCAATGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513978.5
CDS-3UTR CAA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCAAAGTGCATATTGGCCTaGTACTGGCTGGAAGATGAA +
Preference number: 5 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPKCILA*YWLEDE
Trigger: TTCATCTTCCAGCCAGTACAAGGCCAATATGCACTT...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CAA 90 bp GTTCTCAGATTCAGGAGTTTGAGAACCAGAACTGCTATATCCTTCCATGTCTTGAGCACAGGTAAAGCTTaGCTTCAGTGGTTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: VLRFRSLRTRTAISFHVLSTGKA*LQWFLR
Trigger: ACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGCT...CAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp ATTCCGATGGCCCAAGCAATCTGGTCGATCAGTCACCATTCTCAAGCAACTTCTCTCAGATTCAGGAGTTaGAGAACCAGAACTGCTATA +
Preference number: 5 (lower is better)
Translates to: IPMAQAIWSISHHSQATSLRFRS*RTRTAI
Trigger: TATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAG...AGAAGTTGCTTGAGAATGGTGACTGATCGACCAGATTGCTTGGGCCATCGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCAGACATTCAGAACTGTTaGGGATTCTGTCGCATGGAA +
Preference number: 5 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPDIQNC*GFCRME
Trigger: TTCCATGCGACAGAATCCCAAACAGTTCTGAATGTC...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACAGAGAACCTCCACATaGAATTGTACTTGTGACCTC +
Preference number: 5 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPQRTST*NCTCDL
Trigger: GAGGTCACAAGTACAATTCAATGTGGAGGTTCTCTG...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCAGTTAGCTGTAAGCTCTaGACAGAGAACCTCCACATT +
Preference number: 5 (lower is better)
Translates to: CTRTKIISLLTFLSWRPPVSCKL*TENLHI
Trigger: AATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAAC...TGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CCAGCAGGGTGCACTCAAACAAAACGCCTCAGGAAGCACCTTCTTCAAAGGGAAATACAGACATCCTGCTaGAAAACTACTAACATAGTC +
Preference number: 5 (lower is better)
Translates to: PAGCTQTKRLRKHLLQREIQTSC*KTTNIV
Trigger: GACTATGTTAGTAGTTTTCAAGCAGGATGTCTGTAT...TTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS GCA 90 bp CCAAACCTCGAGAGTTCTCAGATTCAGGAGTTTGAGAACCAGAACTaGTATATCCTTCCATGTCTTGCCTTCTTTGTTGAACCACTCCAT +
Preference number: 5 (lower is better)
Translates to: PNLESSQIQEFENQN*YILPCLAFFVEPLH
Trigger: ATGGAGTGGTTCAACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504859.5
CDS-3UTR CAA 90 bp CTCAGATTCAGGAGTTTGAGAACCAGAACTGCTATATCCTTCCATGTCTTGCCTTCAGCAGAAGATGGATaGGGACTGTTACCAACACTT +
Preference number: 5 (lower is better)
Translates to: LRFRSLRTRTAISFHVLPSAEDG*GLLPTL
Trigger: AAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTGA...AGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp GAGAGTAAGGAGACAAATATGTACCTGTCTGTGACTGTTGCTATGATCAGGGCGATATCCTTCCATGTCTaGCCTTCTTTGTTGAACCAC +
Preference number: 5 (lower is better)
Translates to: ESKETNMYLSVTVAMIRAISFHV*PSLLNH
Trigger: GTGGTTCAACAAAGAAGGCAAGACATGGAAGGATAT...CGCCCTGATCATAGCAACAGTCACAGACAGGTACATATTTGTCTCCTTACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp GAGACAAATATGTACCTGTCTGTGACTGTTGCTATGATCAGGGCGTTTGGCACTATATCCTTCCATGTCTaGCCTTCTTTGTTGAACCAC +
Preference number: 5 (lower is better)
Translates to: ETNMYLSVTVAMIRAFGTISFHV*PSLLNH
Trigger: GTGGTTCAACAAAGAAGGCAAGACATGGAAGGATAT...AGTGCCAAACGCCCTGATCATAGCAACAGTCACAGACAGGTACATATTTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp AACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATCAGAGAACCTCCACATaGAATTGTACTTGTGACCTC +
Preference number: 5 (lower is better)
Translates to: NQNYFPPHFPELETSTCNQRTST*NCTCDL
Trigger: GAGGTCACAAGTACAATTCAATGTGGAGGTTCTCTG...ATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp ACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTTGCCTTGAAAGGACCACATaGAGTTTGTCAGTATATGAT +
Preference number: 5 (lower is better)
Translates to: TFLSWRPPHAMSGFSSACLERTT*SLSVYD
Trigger: ATCATATACTGACAAACTCAATGTGGTCCTTTCAAG...GCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTGGATTCTCATCTGCTCCATTTATTGCCTTTTaGAGACTCATGGCTAATTCT +
Preference number: 5 (lower is better)
Translates to: LTFLSWRPPHAMSGFSSAPFIAF*RLMANS
Trigger: AGAATTAGCCATGAGTCTCAAAAAGGCAATAAATGG...AGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp AGCACCTTCTTCAAAGGGAAACATGAGGTATTCCGATGGCCCAAGCAATCTGGTGTAGATGTTACTTGTTaGAAGCAAACCTGTCCACTT +
Preference number: 5 (lower is better)
Translates to: STFFKGKHEVFRWPKQSGVDVTC*KQTCPL
Trigger: AAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC...ACCAGATTGCTTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAGAAGGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CACCAGGCACAGCTGTCCACTAGGCCAACAGATACAAACGATGTAACCAATTCGATACAGACATCCTGCTaGAAAACTACTAACATAGTC +
Preference number: 5 (lower is better)
Translates to: HQAQLSTRPTDTNDVTNSIQTSC*KTTNIV
Trigger: GACTATGTTAGTAGTTTTCAAGCAGGATGTCTGTAT...CGAATTGGTTACATCGTTTGTATCTGTTGGCCTAGTGGACAGCTGTGCCTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS TCA 90 bp TCTGTCGCATGGAAATCTACTCGAGAGTTCTCAGATTCAGGAGTTTaGGAACCAGAACTGCTATATCCTTCCATGTCTTGCCTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: SVAWKSTREFSDSGV*EPELLYPSMSCLLC
Trigger: ACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGTAGATTTCCATGCGACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515200.5
CDS-3UTR CAA 90 bp AACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATAGTCGTTCTTATCACTaGCTAAAGAGGCACCATCAA +
Preference number: 5 (lower is better)
Translates to: NQNYFPPHFPELETSTCNSRSYH*LKRHHQ
Trigger: TTGATGGTGCCTCTTTAGCAAGTGATAAGAACGACT...ATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CAA 90 bp TTATTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCAGCAGAAGATGGATaGGGACTGTTACCAACACTT +
Preference number: 5 (lower is better)
Translates to: LLHKNQNYFPPHFPELETSAEDG*GLLPTL
Trigger: AAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTGA...GGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp AAGCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCGTCTTGCCTTCTTTGTaGAACCACTCCATCCAGATC +
Preference number: 5 (lower is better)
Translates to: KQQNLPQRVKVNFYCTRTVLPSL*NHSIQI
Trigger: GATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGAC...GGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GTTTTCTTTATTAGGGTTACCGAGAAAGCTGGAATAGAGATCTTTGTGTCTTTTCTGCCCGAGTTGGCTTaGCTTCTCCCTTGGAGACAT +
Preference number: 5 (lower is better)
Translates to: VFFIRVTEKAGIEIFVSFLPELA*LLPWRH
Trigger: ATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAG...AAAAGACACAAAGATCTCTATTCCAGCTTTCTCGGTAACCCTAATAAAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp AGGACCACATTGAGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTCTGCCCGAGTTGGCTTaGCTTCTCCCTTGGAGACAT +
Preference number: 5 (lower is better)
Translates to: RTTLSLSVYDVSFSLKVVLPELA*LLPWRH
Trigger: ATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAG...AACGACTTTCAAACTAAAGGATACATCATATACTGACAAACTCAATGTGGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCGATGTATCCTTTAGTTaGAAAGTCGTTAAGAGGGGT +
Preference number: 5 (lower is better)
Translates to: LHKNQNYFPPHFPELETSDVSFS*KVVKRG
Trigger: ACCCCTCTTAACGACTTTCAAACTAAAGGATACATC...GGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCGTAGATGTTACTTGTTaGAAGCAAACCTGTCCACTT +
Preference number: 5 (lower is better)
Translates to: LHKNQNYFPPHFPELETSVDVTC*KQTCPL
Trigger: AAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC...GGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp AGCACCTTCTTCAAAGGGAAACATGAGGTATTCCGATGGCCCAAGCAATCTGGTATACAGACATCCTGCTaGAAAACTACTAACATAGTC +
Preference number: 5 (lower is better)
Translates to: STFFKGKHEVFRWPKQSGIQTSC*KTTNIV
Trigger: GACTATGTTAGTAGTTTTCAAGCAGGATGTCTGTAT...ACCAGATTGCTTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAGAAGGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS GCA 90 bp AATCTACTCGAGAGTTCTCAGATTCAGGAGTTTGAGAACCAGAACTaGTATATCCTTCCATGTCTTGCCTTCTTTGTTGAACCACTCCAT +
Preference number: 5 (lower is better)
Translates to: NLLESSQIQEFENQN*YILPCLAFFVEPLH
Trigger: ATGGAGTGGTTCAACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGTAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515200.5
CDS-3UTR CAA 90 bp TTTATTAGGGTTACCGAGAAAGCTGGAATAGAGATCTTTGTGTCTTTTCCAAAGGCACTTTCGCAGGCTTaGTGTCTTCCACATCTTGCT +
Preference number: 5 (lower is better)
Translates to: FIRVTEKAGIEIFVSFPKALSQA*CLPHLA
Trigger: AGCAAGATGTGGAAGACACAAAGCCTGCGAAAGTGC...CTTTGGAAAAGACACAAAGATCTCTATTCCAGCTTTCTCGGTAACCCTAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp AACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCACATGCAATGTCTTAGGGTCATTTTaGCTTTCTGTTTTACAGTCG +
Preference number: 5 (lower is better)
Translates to: NQNYFPPHFPELETSTCNVLGSF*LSVLQS
Trigger: CGACTGTAAAACAGAAAGCAAAAATGACCCTAAGAC...ATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000542322.5
CDS-3UTR CAA 90 bp AAGCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCTCAGCAGAAGATGGATaGGGACTGTTACCAACACTT +
Preference number: 5 (lower is better)
Translates to: KQQNLPQRVKVNFYCTRTSAEDG*GLLPTL
Trigger: AAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTGA...GGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp AAGCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCCAGAGAACCTCCACATaGAATTGTACTTGTGACCTC +
Preference number: 5 (lower is better)
Translates to: KQQNLPQRVKVNFYCTRTQRTST*NCTCDL
Trigger: GAGGTCACAAGTACAATTCAATGTGGAGGTTCTCTG...GGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000285689.8
ENST00000511134.1
ENST00000513040.5
ENST00000513978.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp TTGCACAAGAACCAAAATTATTTCCCTCCTCACTTTCCTGAGCTGGAGACCTCCCTTGAAAGGACCACATaGAGTTTGTCAGTATATGAT +
Preference number: 5 (lower is better)
Translates to: LHKNQNYFPPHFPELETSLERTT*SLSVYD
Trigger: ATCATATACTGACAAACTCAATGTGGTCCTTTCAAG...GGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS TCA 90 bp ATACAACAATTTCCCAAACCTCGAGAGTTCTCAGATTCAGGAGTTTaGGAACCAGAACTGCTATATCCTTCCATGTCTTGCCTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: IQQFPKPREFSDSGV*EPELLYPSMSCLLC
Trigger: ACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGGTTTGGGAAATTGTTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504859.5
CDS TCA 90 bp ATCTTCAAACCCAATTTAAGAGTAATAAATACATGTAGGGCAAAATaGAGGCTCCAAAAGCCTGTCACTGGTGCCTCAAACAAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: IFKPNLRVINTCRAK*RLQKPVTGASNKPR
Trigger: TCTGGGCTTGTTTGAGGCACCAGTGACAGGCTTTTGGAGCCTTCATTTTGCCCTACATGTATTTATTACTCTTAAATTGGGTTTGAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508523.5
CDS-3UTR CAA 90 bp CAAAATAAGTTTAATTTAGTACTTCAGTCACATGCCTCACAGATTCTTGACCAGGCACTTTCGCAGGCTTaGTGTCTTCCACATCTTGCT +
Preference number: 5 (lower is better)
Translates to: QNKFNLVLQSHASQILDQALSQA*CLPHLA
Trigger: AGCAAGATGTGGAAGACACAAAGCCTGCGAAAGTGC...CTGGTCAAGAATCTGTGAGGCATGTGACTGAAGTACTAAATTAAACTTATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTAAGTGCATATTGGCCTaGTACTGGCTGGAAGATGAA +
Preference number: 5 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLKCILA*YWLEDE
Trigger: TTCATCTTCCAGCCAGTACAAGGCCAATATGCACTT...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000542322.5
CDS-3UTR CAA 90 bp CAAAATAAGTTTAATTTAGTACTTCAGTCACATGCCTCACAGATTCTTGACCAGAGCACAGGTAAAGCTTaGCTTCAGTGGTTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: QNKFNLVLQSHASQILDQSTGKA*LQWFLR
Trigger: ACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGCT...CTGGTCAAGAATCTGTGAGGCATGTGACTGAAGTACTAAATTAAACTTATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTTCAGCAGAAGATGGATaGGGACTGTTACCAACACTT +
Preference number: 5 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLSAEDG*GLLPTL
Trigger: AAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTGA...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTTTTGTCTTGCCTTCTTTGTaGAACCACTCCATCCAGATC +
Preference number: 5 (lower is better)
Translates to: DVTCLKQTCPLRAIYCLFVLPSL*NHSIQI
Trigger: GATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGAC...AAAAAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTCAGAGAACCTCCACATaGAATTGTACTTGTGACCTC +
Preference number: 5 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLQRTST*NCTCDL
Trigger: GAGGTCACAAGTACAATTCAATGTGGAGGTTCTCTG...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTGAAAAAGGAAACCTGTaGAACGAGTCTTTCGGGAGA +
Preference number: 5 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLEKGNL*NESFGR
Trigger: TCTCCCGAAAGACTCGTTCAACAGGTTTCCTTTTTC...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp AGGACCACATTGAGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTTGTACAGGGAGACTCTaGGCTTTTCCTTCAGGTACT +
Preference number: 5 (lower is better)
Translates to: RTTLSLSVYDVSFSLKVVCTGRL*AFPSGT
Trigger: AGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACA...AACGACTTTCAAACTAAAGGATACATCATATACTGACAAACTCAATGTGGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GCAGCAAAATCTTCCTCAGAGAGTCAAGGTCAACTTTTATTGCACAAGAACCAAGTAGATGTTACTTGTTaGAAGCAAACCTGTCCACTT +
Preference number: 5 (lower is better)
Translates to: AAKSSSESQGQLLLHKNQVDVTC*KQTCPL
Trigger: AAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC...TTGGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp AATGTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCAGTCGTTCTTATCACTaGCTAAAGAGGCACCATCAA +
Preference number: 5 (lower is better)
Translates to: NVDVTCLKQTCPLRAIYCSRSYH*LKRHHQ
Trigger: TTGATGGTGCCTCTTTAGCAAGTGATAAGAACGACT...GCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000542322.5
CDS-3UTR CAA 90 bp AATGTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCATATCCTTCCATGTCTaGCCTTCTTTGTTGAACCAC +
Preference number: 5 (lower is better)
Translates to: NVDVTCLKQTCPLRAIYCISFHV*PSLLNH
Trigger: GTGGTTCAACAAAGAAGGCAAGACATGGAAGGATAT...GCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp AGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTAAGAGGGGTGTAGACATTCAGAACTGTTaGGGATTCTGTCGCATGGAA +
Preference number: 5 (lower is better)
Translates to: SLSVYDVSFSLKVVKRGVDIQNC*GFCRME
Trigger: TTCCATGCGACAGAATCCCAAACAGTTCTGAATGTC...TACACCCCTCTTAACGACTTTCAAACTAAAGGATACATCATATACTGACAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp CAAAATAAGTTTAATTTAGTACTTCAGTCACATGCCTCACAGATTCTTGACCAGGTTAGCTGTAAGCTCTaGACAGAGAACCTCCACATT +
Preference number: 5 (lower is better)
Translates to: QNKFNLVLQSHASQILDQVSCKL*TENLHI
Trigger: AATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAAC...CTGGTCAAGAATCTGTGAGGCATGTGACTGAAGTACTAAATTAAACTTATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GTTTTCTTTATTAGGGTTACCGAGAAAGCTGGAATAGAGATCTTTGTGTCTTTTCTCAGATTCAGGAGTTaGAGAACCAGAACTGCTATA +
Preference number: 5 (lower is better)
Translates to: VFFIRVTEKAGIEIFVSFLRFRS*RTRTAI
Trigger: TATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAG...AAAAGACACAAAGATCTCTATTCCAGCTTTCTCGGTAACCCTAATAAAGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513978.5
ENST00000514099.5
CDS-3UTR CAA 90 bp GTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTCTTGAAAGGACCACATaGAGTTTGTCAGTATATGAT +
Preference number: 5 (lower is better)
Translates to: VDVTCLKQTCPLRAIYCLLERTT*SLSVYD
Trigger: ATCATATACTGACAAACTCAATGTGGTCCTTTCAAG...AAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTTTTGTAGATGTTACTTGTTaGAAGCAAACCTGTCCACTT +
Preference number: 5 (lower is better)
Translates to: DVTCLKQTCPLRAIYCLFVDVTC*KQTCPL
Trigger: AAGTGGACAGGTTTGCTTCAAACAAGTAACATCTAC...AAAAAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp GATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCTTTTTCTTGAAAGGACCACATaGAGTTTGTCAGTATATGAT +
Preference number: 5 (lower is better)
Translates to: DVTCLKQTCPLRAIYCLFLERTT*SLSVYD
Trigger: ATCATATACTGACAAACTCAATGTGGTCCTTTCAAG...AAAAAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp AATGTAGATGTTACTTGTTTGAAGCAAACCTGTCCACTTAGAGCCATTTATTGCCCATTTATTGCCTTTTaGAGACTCATGGCTAATTCT +
Preference number: 5 (lower is better)
Translates to: NVDVTCLKQTCPLRAIYCPFIAF*RLMANS
Trigger: AGAATTAGCCATGAGTCTCAAAAAGGCAATAAATGG...GCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285689.8
ENST00000513040.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS-3UTR CAA 90 bp AGGACCACATTGAGTTTGTCAGTATATGATGTATCCTTTAGTTTGAAAGTCGTTATACAGACATCCTGCTaGAAAACTACTAACATAGTC +
Preference number: 5 (lower is better)
Translates to: RTTLSLSVYDVSFSLKVVIQTSC*KTTNIV
Trigger: GACTATGTTAGTAGTTTTCAAGCAGGATGTCTGTAT...AACGACTTTCAAACTAAAGGATACATCATATACTGACAAACTCAATGTGGTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285689.8
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS CCA 72 bp AGGCCGGGCCGCGCCAAGCTCCCGGGGCCGCGGACCTaGACACGTCGGAGCGGGCGCGATTGGTCCGACCCA +
Preference number: 6 (lower is better)
Translates to: RPGRAKLPGPRT*TRRSGRDWSDP
Trigger: TGGGTCGGACCAATCGCGCCCGCTCCGACGTGTCCAGGTCCGCGGCCCCGGGAGCTTGGCGCGGCCCGGCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS GCA 72 bp CTAGGTCCGGGTGCGCAGGCCAAGCAAGCGGCGCCGTaGCCTCCCCTGCACCCTCCGCCCAGCGCATCCAGG +
Preference number: 6 (lower is better)
Translates to: LGPGAQAKQAAP*PPLHPPPSASR
Trigger: CCTGGATGCGCTGGGCGGAGGGTGCAGGGGAGGGCACGGCGCCGCTTGCTTGGCCTGCGCACCCGGACCTAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513913.5
ENST00000514932.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS GCA 72 bp CTGGAGGGCACCTTCAGACTTCCGCGCGCCTGGCTCTaGCCCGGCTCGTCCCGGCTTCTAGGTCCGGGTGCG +
Preference number: 6 (lower is better)
Translates to: LEGTFRLPRAWL*PGSSRLLGPGA
Trigger: CGCACCCGGACCTAGAAGCCGGGACGAGCCGGGGCAGAGCCAGGCGCGCGGAAGTCTGAAGGTGCCCTCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000285689.8
ENST00000505720.1
ENST00000513913.5
ENST00000513978.5
ENST00000514099.5
ENST00000514932.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS CCA 72 bp CCGTGTCTGGAGGGCACCTTCAGACTTCCGCGCGCCTaGCTCTGCCCCGGCTCGTCCCGGCTTCTAGGTCCG +
Preference number: 6 (lower is better)
Translates to: PCLEGTFRLPRA*LCPGSSRLLGP
Trigger: CGGACCTAGAAGCCGGGACGAGCCGGGGCAGAGCCAGGCGCGCGGAAGTCTGAAGGTGCCCTCCAGACACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000285689.8
ENST00000505720.1
ENST00000513913.5
ENST00000513978.5
ENST00000514099.5
ENST00000514932.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS CAA 90 bp AACACCGAGCTGGGGCTGTCTGTGGAGCTGCGTGAGGCCTCCACGTaGGCCTTCCTTGGGCTGCCCGGAGTCTCAAACCGGAACACCGTG +
Preference number: 6 (lower is better)
Translates to: NTELGLSVELREAST*AFLGLPGVSNRNTV
Trigger: CACGGTGTTCCGGTTTGAGACTCCGGGCAGCCCAAGGAAGGCCAACGTGGAGGCCTCACGCAGCTCCACAGACAGCCCCAGCTCGGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506445.5
CDS CAA 72 bp CTGTGGAGCTGCGTGAGGCCTCCACGTTGGCCTTCCTaGGGCTGCCCGGAGTCTCAAACCGGAACACCGTGT +
Preference number: 6 (lower is better)
Translates to: LWSCVRPPRWPS*GCPESQTGTPC
Trigger: ACACGGTGTTCCGGTTTGAGACTCCGGGCAGCCCAAGGAAGGCCAACGTGGAGGCCTCACGCAGCTCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506445.5
CDS CAA 72 bp ACAGCGAGGCCCTTTCCCAATCTCCATTCTAACCCCTaGCCTGGTGTCCCAACGGCAGTAGCTGCAGGTCGC +
Preference number: 6 (lower is better)
Translates to: TARPFPNLHSNP*PGVPTAVAAGR
Trigger: GCGACCTGCAGCTACTGCCGTTGGGACACCAGGCAAGGGGTTAGAATGGAGATTGGGAAAGGGCCTCGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505441.1
CDS CAA 72 bp ATCCAGGCTGCCCACTTCCTCTGGCCCGTCAATACTTaGTGTCAGCAAGTCCTCAGGCTGTGCTGGCCCTCA +
Preference number: 6 (lower is better)
Translates to: IQAAHFLWPVNT*CQQVLRLCWPS
Trigger: TGAGGGCCAGCACAGCCTGAGGACTTGCTGACACAAAGTATTGACGGGCCAGAGGAAGTGGGCAGCCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505720.1
ENST00000513913.5
CDS GCA 72 bp CCGAGCACTTTCGCAGGCTTTGTGTCTTCCACATCTTaGTGTAGTTCAGTCATCGGGGCCGTGTCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: PSTFAGFVSSTS*CSSVIGAVSGG
Trigger: CCCTCCAGACACGGCCCCGATGACTGAACTACAGCAAGATGTGGAAGACACAAAGCCTGCGAAAGTGCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000285689.8
ENST00000505720.1
ENST00000513913.5
ENST00000513978.5
ENST00000514099.5
ENST00000514932.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS GCA 72 bp CACCATTCTCAGCCTCTGAGTGGGCTGAGCCAAGTTTaGTCTCCCTCTTCCCGAGCACTTTCGCAGGCTTTG +
Preference number: 6 (lower is better)
Translates to: HHSQPLSGLSQV*SPSSRALSQAL
Trigger: CAAAGCCTGCGAAAGTGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCACTCAGAGGCTGAGAATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS GCA 72 bp GTGCTGGCCCTCAAGATTGTTGGGCTGAGCCAAGTTTaGTCTCCCTCTTCCCGAGCACTTTCGCAGGCTTTG +
Preference number: 6 (lower is better)
Translates to: VLALKIVGLSQV*SPSSRALSQAL
Trigger: CAAAGCCTGCGAAAGTGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCAACAATCTTGAGGGCCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505720.1
ENST00000513913.5
CDS CCA 72 bp TCCAGGTCCGGACCCACTGGCTTCACTTCTCTCCCGTaGAACATACTCTTCCAGGGCATAAGCTGTGCTTGG +
Preference number: 6 (lower is better)
Translates to: SRSGPTGFTSLP*NILFQGISCAW
Trigger: CCAAGCACAGCTTATGCCCTGGAAGAGTATGTTCCACGGGAGAGAAGTGAAGCCAGTGGGTCCGGACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS CAA 72 bp ACACCATTCTCAGCCTCTGAGTGGGCTGAGCCAAGTTaGCTCTCCCTCTTCCCGAGCACTTTCGCAGGCTTT +
Preference number: 6 (lower is better)
Translates to: TPFSASEWAEPS*LSLFPSTFAGF
Trigger: AAAGCCTGCGAAAGTGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCACTCAGAGGCTGAGAATGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285689.8
ENST00000513978.5
ENST00000514099.5
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS CAA 72 bp TGTGCTGGCCCTCAAGATTGTTGGGCTGAGCCAAGTTaGCTCTCCCTCTTCCCGAGCACTTTCGCAGGCTTT +
Preference number: 6 (lower is better)
Translates to: CAGPQDCWAEPS*LSLFPSTFAGF
Trigger: AAAGCCTGCGAAAGTGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCAACAATCTTGAGGGCCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505720.1
ENST00000513913.5
CDS CAA 90 bp TTAACTTTGACAGCGAGGCCCTTTCCCAATCTCCATTCTAACCCCTaGCCTGGTGTCCCAACGGCAGTAGCTGCAGGTCGCACCTGTTTC +
Preference number: 6 (lower is better)
Translates to: LTLTARPFPNLHSNP*PGVPTAVAAGRTCF
Trigger: GAAACAGGTGCGACCTGCAGCTACTGCCGTTGGGACACCAGGCAAGGGGTTAGAATGGAGATTGGGAAAGGGCCTCGCTGTCAAAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505441.1
CDS GCA 72 bp AGACATTCAGAGAGAGGTAGTGGGCTGAGCCAAGTTTaGTCTCCCTCTTCCCGAGCACTTTCGCAGGCTTTG +
Preference number: 6 (lower is better)
Translates to: RHSERGSGLSQV*SPSSRALSQAL
Trigger: CAAAGCCTGCGAAAGTGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCACTACCTCTCTCTGAATGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514932.5
CDS TCA 72 bp CAGCCTCTGAGCTTGGAGGTCTTGTCAGCAGCAGACTaGAACTATGTAGAATTCAAGCAGCAGAGGCTAGCG +
Preference number: 6 (lower is better)
Translates to: QPLSLEVLSAAD*NYVEFKQQRLA
Trigger: CGCTAGCCTCTGCTGCTTGAATTCTACATAGTTTCAGTCTGCTGCTGACAAGACCTCCAAGCTCAGAGGCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502348.5
CDS CCA 72 bp TCAGAAGTTTTCTCTTTCAGCGTCTGCTCAGAGGGATaGCACCAGCCGCACTTGAAACCCACATGTGTGAGA +
Preference number: 6 (lower is better)
Translates to: SEVFSFSVCSEG*HQPHLKPTCVR
Trigger: TCTCACACATGTGGGTTTCAAGTGCGGCTGGTGCCATCCCTCTGAGCAGACGCTGAAAGAGAAAACTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS CAA 72 bp ACACCAGATCTGCCCAACCACAGCTCTTTGAGCCAGTaGGTGTGCTTTTCGCTCACAAGTGCTATCTCAGAA +
Preference number: 6 (lower is better)
Translates to: TPDLPNHSSLSQ*VCFSLTSAISE
Trigger: TTCTGAGATAGCACTTGTGAGCGAAAAGCACACCAACTGGCTCAAAGAGCTGTGGTTGGGCAGATCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS GCA 72 bp GGAGAGGAAGCTAATTGGCCAAGCAGGTGGAACATTTaGCTAAGAAGGCACAATCTGTTTAGCCTCCTGGTA +
Preference number: 6 (lower is better)
Translates to: GEEANWPSRWNI*LRRHNLFSLLV
Trigger: TACCAGGAGGCTAAACAGATTGTGCCTTCTTAGGCAAATGTTCCACCTGCTTGGCCAATTAGCTTCCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000515200.5
ENST00000542322.5
ENST00000544396.5
CDS GCA 72 bp GATCTGCCCAACCACAGCTCTTTGAGCCAGTTGGTGTaGTTTTCGCTCACAAGTGCTATCTCAGAAGTTTTC +
Preference number: 6 (lower is better)
Translates to: DLPNHSSLSQLV*FSLTSAISEVF
Trigger: GAAAACTTCTGAGATAGCACTTGTGAGCGAAAAGCACACCAACTGGCTCAAAGAGCTGTGGTTGGGCAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS CAA 90 bp TGCCCGAGTTGGCTTTGCTTCTCCCTTGGAGACATTCAGAACTGTTaGGGATTCTGTCGCATGGAAATCTACTCGAGAGTTCTCAGATTC +
Preference number: 6 (lower is better)
Translates to: CPSWLCFSLGDIQNC*GFCRMEIYSRVLRF
Trigger: GAATCTGAGAACTCTCGAGTAGATTTCCATGCGACAGAATCCCAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515200.5
CDS CAA 90 bp GGAAGGAACTTTGTATTTACACCAGATCTGCCCAACCACAGCTCTTaGAGCCAGTTGGTGTGCTTTTCGCTCACAAGTGCTATCTCAGAA +
Preference number: 6 (lower is better)
Translates to: GRNFVFTPDLPNHSS*SQLVCFSLTSAISE
Trigger: TTCTGAGATAGCACTTGTGAGCGAAAAGCACACCAACTGGCTCAAAGAGCTGTGGTTGGGCAGATCTGGTGTAAATACAAAGTTCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS TCA 72 bp TTGTATTTACACCAGATCTGCCCAACCACAGCTCTTTaGGCCAGTTGGTGTGCTTTTCGCTCACAAGTGCTA +
Preference number: 6 (lower is better)
Translates to: LYLHQICPTTAL*ASWCAFRSQVL
Trigger: TAGCACTTGTGAGCGAAAAGCACACCAACTGGCTCAAAGAGCTGTGGTTGGGCAGATCTGGTGTAAATACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS GCA 72 bp TCTCCCGTGGAACATACTCTTCCAGGGCATAAGCTGTaGTTGGAATGTTTGCTGAATGCTCCTTTTTGCTTG +
Preference number: 6 (lower is better)
Translates to: SPVEHTLPGHKL*LECLLNAPFCL
Trigger: CAAGCAAAAAGGAGCATTCAGCAAACATTCCAAGCACAGCTTATGCCCTGGAAGAGTATGTTCCACGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS CAA 72 bp TTTGTATTTACACCAGATCTGCCCAACCACAGCTCTTaGAGCCAGTTGGTGTGCTTTTCGCTCACAAGTGCT +
Preference number: 6 (lower is better)
Translates to: FVFTPDLPNHSS*SQLVCFSLTSA
Trigger: AGCACTTGTGAGCGAAAAGCACACCAACTGGCTCAAAGAGCTGTGGTTGGGCAGATCTGGTGTAAATACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS CAA 90 bp ACCGTGTCACTAGAAGGCAGCCTTTTCTTCACCATTGTGCGCTTATaGACCCGCAAGTCAAGGAACAACCTTAAAAGCTCATTTCTGAGT +
Preference number: 6 (lower is better)
Translates to: TVSLEGSLFFTIVRL*TRKSRNNLKSSFLS
Trigger: ACTCAGAAATGAGCTTTTAAGGTTGTTCCTTGACTTGCGGGTCAATAAGCGCACAATGGTGAAGAAAAGGCTGCCTTCTAGTGACACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506445.5
CDS CAA 72 bp CTAGAAGGCAGCCTTTTCTTCACCATTGTGCGCTTATaGACCCGCAAGTCAAGGAACAACCTTAAAAGCTCA +
Preference number: 6 (lower is better)
Translates to: LEGSLFFTIVRL*TRKSRNNLKSS
Trigger: TGAGCTTTTAAGGTTGTTCCTTGACTTGCGGGTCAATAAGCGCACAATGGTGAAGAAAAGGCTGCCTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506445.5
CDS CAA 90 bp TTTGTATTTACACCAGATCTGCCCAACCACAGCTCTTTGAGCCAGTaGGTGTGCTTTTCGCTCACAAGTGCTATCTCAGAAGTTTTCTCT +
Preference number: 6 (lower is better)
Translates to: FVFTPDLPNHSSLSQ*VCFSLTSAISEVFS
Trigger: AGAGAAAACTTCTGAGATAGCACTTGTGAGCGAAAAGCACACCAACTGGCTCAAAGAGCTGTGGTTGGGCAGATCTGGTGTAAATACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS CAA 90 bp ATGTTTGCTGAATGCTCCTTTTTGCTTGTAGGACTTGCTGTCTCCTaGTCATCTTCTAGAGGCCAGGTGATCTTCAAGAAACTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: MFAECSFLLVGLAVS*SSSRGQVIFKKLWE
Trigger: TTCCCAGAGTTTCTTGAAGATCACCTGGCCTCTAGAAGATGACAAGGAGACAGCAAGTCCTACAAGCAAAAAGGAGCATTCAGCAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS TCA 72 bp TTTCCCAAACCTCGAGAGTTCTCAGATTCAGGAGTTTaGGAACCAGAACTGCTATATCCTTCCATGTCTTGC +
Preference number: 6 (lower is better)
Translates to: FPKPREFSDSGV*EPELLYPSMSC
Trigger: GCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGGTTTGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504859.5
CDS CAA 72 bp TCTTCAAGAAACTCTGGGAAATGTCGGGAAGGAACTTaGTATTTACACCAGATCTGCCCAACCACAGCTCTT +
Preference number: 6 (lower is better)
Translates to: SSRNSGKCREGT*YLHQICPTTAL
Trigger: AAGAGCTGTGGTTGGGCAGATCTGGTGTAAATACAAAGTTCCTTCCCGACATTTCCCAGAGTTTCTTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS CAA 72 bp GAATGCTCCTTTTTGCTTGTAGGACTTGCTGTCTCCTaGTCATCTTCTAGAGGCCAGGTGATCTTCAAGAAA +
Preference number: 6 (lower is better)
Translates to: ECSFLLVGLAVS*SSSRGQVIFKK
Trigger: TTTCTTGAAGATCACCTGGCCTCTAGAAGATGACAAGGAGACAGCAAGTCCTACAAGCAAAAAGGAGCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS CAA 90 bp TTCTGTCGCATGGAAATCTACTCGAGAGTTCTCAGATTCAGGAGTTaGAGAACCAGAACTGCTATATCCTTCCATGTCTTGCCTTCTTTG +
Preference number: 6 (lower is better)
Translates to: FCRMEIYSRVLRFRS*RTRTAISFHVLPSL
Trigger: CAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGTAGATTTCCATGCGACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515200.5
CDS TCA 72 bp TGGAAATCTACTCGAGAGTTCTCAGATTCAGGAGTTTaGGAACCAGAACTGCTATATCCTTCCATGTCTTGC +
Preference number: 6 (lower is better)
Translates to: WKSTREFSDSGV*EPELLYPSMSC
Trigger: GCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGTAGATTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515200.5
CDS CCA 72 bp TCATCTTCTAGAGGCCAGGTGATCTTCAAGAAACTCTaGGAAATGTCGGGAAGGAACTTTGTATTTACACCA +
Preference number: 6 (lower is better)
Translates to: SSSRGQVIFKKL*EMSGRNFVFTP
Trigger: TGGTGTAAATACAAAGTTCCTTCCCGACATTTCCCAGAGTTTCTTGAAGATCACCTGGCCTCTAGAAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513040.5
CDS CAA 72 bp ATTTCCCAAACCTCGAGAGTTCTCAGATTCAGGAGTTaGAGAACCAGAACTGCTATATCCTTCCATGTCTTG +
Preference number: 6 (lower is better)
Translates to: ISQTSRVLRFRS*RTRTAISFHVL
Trigger: CAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGGTTTGGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504859.5
CDS CAA 72 bp ATGGAAATCTACTCGAGAGTTCTCAGATTCAGGAGTTaGAGAACCAGAACTGCTATATCCTTCCATGTCTTG +
Preference number: 6 (lower is better)
Translates to: MEIYSRVLRFRS*RTRTAISFHVL
Trigger: CAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGTAGATTTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515200.5
CDS CAA 90 bp AATACAACAATTTCCCAAACCTCGAGAGTTCTCAGATTCAGGAGTTaGAGAACCAGAACTGCTATATCCTTCCATGTCTTGCCTTCTTTG +
Preference number: 6 (lower is better)
Translates to: NTTISQTSRVLRFRS*RTRTAISFHVLPSL
Trigger: CAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGGTTTGGGAAATTGTTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504859.5