RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRAMD2A (Homo sapiens)

Ensembl gene IDs: ENSG00000175318

Ensembl transcript IDs: ENST00000309731.12, ENST00000562288.1, ENST00000563133.5, ENST00000564129.5, ENST00000564184.1, ENST00000564773.1, ENST00000565233.5, ENST00000567029.5, ENST00000567637.5, ENST00000567662.5, ENST00000568594.5, ENST00000570275.5

Found 274 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCATGAGCCCTCCCCTCTGCATTCACAGATTCTCAGCAGGCCCCTaGCCAAGCCTGACAGGTGCCTGGCTGCCCGCAGAGAAGCCCTGT +
Preference number: 1 (lower is better)
Translates to: AMSPPLCIHRFSAGP*PSLTGAWLPAEKPC
Trigger: ACAGGGCTTCTCTGCGGGCAGCCAGGCACCTGTCAGGCTTGGGCAGGGGCCTGCTGAGAATCTGTGAATGCAGAGGGGAGGGCTCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR GCA 90 bp CTGCATTCACAGATTCTCAGCAGGCCCCTGCCCAAGCCTGACAGGTaGCTGGCTGCCCGCAGAGAAGCCCTGTGGGAACACAGAGTGTTG +
Preference number: 1 (lower is better)
Translates to: LHSQILSRPLPKPDR*LAARREALWEHRVL
Trigger: CAACACTCTGTGTTCCCACAGGGCTTCTCTGCGGGCAGCCAGGCACCTGTCAGGCTTGGGCAGGGGCCTGCTGAGAATCTGTGAATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR GCA 90 bp GGAGGGACAGGCACACCCGCAACACTCAAAGCCCTGGGCCCCAAGTaGACCTCCAAAGTCACCTACGCTGCAGCATGGCTCTTGCCCTTT +
Preference number: 1 (lower is better)
Translates to: GGTGTPATLKALGPK*TSKVTYAAAWLLPF
Trigger: AAAGGGCAAGAGCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCTTTGAGTGTTGCGGGTGTGCCTGTCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 90 bp GAGCACTATCTGGAGGGACAGGCACACCCGCAACACTCAAAGCCCTaGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGC +
Preference number: 1 (lower is better)
Translates to: EHYLEGQAHPQHSKP*APSAPPKSPTLQHG
Trigger: GCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCTTTGAGTGTTGCGGGTGTGCCTGTCCCTCCAGATAGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 90 bp TTCAGGTACCTCTGTTCTTCACAGCCACTGCCACCATCTCCGCCGTaGGCAGCATCTCCCCATAATGCAGCCAGCCACCTCATGAGGGGC +
Preference number: 1 (lower is better)
Translates to: FRYLCSSQPLPPSPP*AASPHNAASHLMRG
Trigger: GCCCCTCATGAGGTGGCTGGCTGCATTATGGGGAGATGCTGCCCACGGCGGAGATGGTGGCAGTGGCTGTGAAGAACAGAGGTACCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 90 bp GCCGGCACAGAGCCCTGGCCCAGAGCATGGAAATTCATCTCTGGCTaGAATCCTGGCCATGAGCCCTCCCCTCTGCATTCACAGATTCTC +
Preference number: 1 (lower is better)
Translates to: AGTEPWPRAWKFISG*NPGHEPSPLHSQIL
Trigger: GAGAATCTGTGAATGCAGAGGGGAGGGCTCATGGCCAGGATTCCAGCCAGAGATGAATTTCCATGCTCTGGGCCAGGGCTCTGTGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR GCA 90 bp GGAAATTCATCTCTGGCTGGAATCCTGGCCATGAGCCCTCCCCTCTaGATTCACAGATTCTCAGCAGGCCCCTGCCCAAGCCTGACAGGT +
Preference number: 1 (lower is better)
Translates to: GNSSLAGILAMSPPL*IHRFSAGPCPSLTG
Trigger: ACCTGTCAGGCTTGGGCAGGGGCCTGCTGAGAATCTGTGAATGCAGAGGGGAGGGCTCATGGCCAGGATTCCAGCCAGAGATGAATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 90 bp GCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATaGCTCTTGCCCTTTCTGAGCCTGGGTATAGCTGAAGACCAAGTT +
Preference number: 1 (lower is better)
Translates to: ALGPKCTSKVTYAAA*LLPFLSLGIAEDQV
Trigger: AACTTGGTCTTCAGCTATACCCAGGCTCAGAAAGGGCAAGAGCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR GCA 90 bp CAGCTGAGGACACAGAATTCAGGTACCTCTGTTCTTCACAGCCACTaGCACCATCTCCGCCGTGGGCAGCATCTCCCCATAATGCAGCCA +
Preference number: 1 (lower is better)
Translates to: QLRTQNSGTSVLHSH*HHLRRGQHLPIMQP
Trigger: TGGCTGCATTATGGGGAGATGCTGCCCACGGCGGAGATGGTGGCAGTGGCTGTGAAGAACAGAGGTACCTGAATTCTGTGTCCTCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 90 bp CTCTACCTTTCCTGTCCCCAGAGGTATGAGATAGACCCCCTGGCCTaGTTCCTGCACTGTGCTAGGCCCACAGTGGACACTTCCACCTTA +
Preference number: 1 (lower is better)
Translates to: LYLSCPQRYEIDPLA*FLHCARPTVDTSTL
Trigger: TAAGGTGGAAGTGTCCACTGTGGGCCTAGCACAGTGCAGGAACCAGGCCAGGGGGTCTATCTCATACCTCTGGGGACAGGAAAGGTAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR TCA 90 bp GTGGCAGAGCCACATTCCAAATGCGAAAGCATGGCCTCTGTCCTTTaGGGTGGCCTCCAGTGTTCTGCCTGTGTGCCAGAACTGTTTCCA +
Preference number: 1 (lower is better)
Translates to: VAEPHSKCESMASVL*GGLQCSACVPELFP
Trigger: TGGAAACAGTTCTGGCACACAGGCAGAACACTGGAGGCCACCTCAAAGGACAGAGGCCATGCTTTCGCATTTGGAATGTGGCTCTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR GCA 90 bp CATGGCCTGCAACCCAATGACTATGGGGGTGACACAAGTGACCTCTaGCCTGTGATGGCTCAACACCATCACACGCAACTGTCCAGACAA +
Preference number: 1 (lower is better)
Translates to: HGLQPNDYGGDTSDL*PVMAQHHHTQLSRQ
Trigger: TTGTCTGGACAGTTGCGTGTGATGGTGTTGAGCCATCACAGGGCAGAGGTCACTTGTGTCACCCCCATAGTCATTGGGTTGCAGGCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 90 bp CTCACTAAGCCCTTCCAGAACCTCCAAAGCCACTATCTTAGCAGATaGGAGTCCCAGGGCGATGAGGCCAGAGTTGTGGGACACAGAGAA +
Preference number: 1 (lower is better)
Translates to: LTKPFQNLQSHYLSR*ESQGDEARVVGHRE
Trigger: TTCTCTGTGTCCCACAACTCTGGCCTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTTCTGGAAGGGCTTAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR TCA 90 bp GTGATCAAAGGCCCTGCTCCACTTGTCTCACCGGAAAGTGACAGCTaGGGACACAGAATTCAGGTACCTCTGTTCTTCACAGCCACTGCC +
Preference number: 1 (lower is better)
Translates to: VIKGPAPLVSPESDS*GHRIQVPLFFTATA
Trigger: GGCAGTGGCTGTGAAGAACAGAGGTACCTGAATTCTGTGTCCTCAGCTGTCACTTTCCGGTGAGACAAGTGGAGCAGGGCCTTTGATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR GCA 90 bp ATGCGAAAGCATGGCCTCTGTCCTTTGAGGTGGCCTCCAGTGTTCTaGCTGTGTGCCAGAACTGTTTCCAAGGACCCAGTTTGTTTGTTT +
Preference number: 1 (lower is better)
Translates to: MRKHGLCPLRWPPVF*LCARTVSKDPVCLF
Trigger: AAACAAACAAACTGGGTCCTTGGAAACAGTTCTGGCACACAGGCAGAACACTGGAGGCCACCTCAAAGGACAGAGGCCATGCTTTCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 90 bp GCTGAAGACCAAGTTCACCAGCATCTTGGCACATCCACCTATAACTaGCACCTCTCATGGCCTCTGACAACCAAGCAAGGCTCAGAGAAT +
Preference number: 1 (lower is better)
Translates to: AEDQVHQHLGTSTYN*HLSWPLTTKQGSEN
Trigger: ATTCTCTGAGCCTTGCTTGGTTGTCAGAGGCCATGAGAGGTGCCAGTTATAGGTGGATGTGCCAAGATGCTGGTGAACTTGGTCTTCAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 90 bp GTTCACCAGCATCTTGGCACATCCACCTATAACTGGCACCTCTCATaGCCTCTGACAACCAAGCAAGGCTCAGAGAATGGATTTTTATCT +
Preference number: 1 (lower is better)
Translates to: VHQHLGTSTYNWHLS*PLTTKQGSENGFLS
Trigger: AGATAAAAATCCATTCTCTGAGCCTTGCTTGGTTGTCAGAGGCCATGAGAGGTGCCAGTTATAGGTGGATGTGCCAAGATGCTGGTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR TCA 90 bp GGCCAGGCTCTAAATTTCATCCTAAAAACTGGGATGGGGAGAGCATaGAGAGACCACTTACTGGTAGTCCCTCCAATTCTCATTTGGGTT +
Preference number: 1 (lower is better)
Translates to: GQALNFILKTGMGRA*RDHLLVVPPILIWV
Trigger: AACCCAAATGAGAATTGGAGGGACTACCAGTAAGTGGTCTCTTCATGCTCTCCCCATCCCAGTTTTTAGGATGAAATTTAGAGCCTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR TCA 90 bp AGCATCTTGGCACATCCACCTATAACTGGCACCTCTCATGGCCTCTaGCAACCAAGCAAGGCTCAGAGAATGGATTTTTATCTCTGTCTT +
Preference number: 1 (lower is better)
Translates to: SILAHPPITGTSHGL*QPSKAQRMDFYLCL
Trigger: AAGACAGAGATAAAAATCCATTCTCTGAGCCTTGCTTGGTTGTCAGAGGCCATGAGAGGTGCCAGTTATAGGTGGATGTGCCAAGATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR TCA 90 bp ATATTTTCAAAGGCTAAGGCCATAGCAAAACAACCCAAGGGTGGTTaGATCAAACTCAGGGAATTAGAGGAGCATCAGCCAATGCAAGCA +
Preference number: 1 (lower is better)
Translates to: IFSKAKAIAKQPKGG*IKLRELEEHQPMQA
Trigger: TGCTTGCATTGGCTGATGCTCCTCTAATTCCCTGAGTTTGATTCAACCACCCTTGGGTTGTTTTGCTATGGCCTTAGCCTTTGAAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR TCA 90 bp AGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCTCTTGCCCCTGCCCAAGCCTaGCAGGTGCCTGGCTGCCCG +
Preference number: 2 (lower is better)
Translates to: SPGPQVHLQSHLRCSMALAPAQA*QVPGCP
Trigger: CGGGCAGCCAGGCACCTGTCAGGCTTGGGCAGGGGC...AAGAGCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR TCA 90 bp AGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCTCTTGCTGTTGGCCATGCCTaGGATGCGGGCAGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: SPGPQVHLQSHLRCSMALAVGHA*DAGRQA
Trigger: TGCCTGCCTGCCCGCATCTCAGGCATGGCCAACAGC...AAGAGCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR GCA 90 bp ATAGACCCCCTGGCCTGGTTCCTGCACTGTGCTAGGCCCACAGTGGACACTTCCTTCTCAGCAGGCCCCTaGCCAAGCCTGACAGGTGCC +
Preference number: 2 (lower is better)
Translates to: IDPLAWFLHCARPTVDTSFSAGP*PSLTGA
Trigger: GGCACCTGTCAGGCTTGGGCAGGGGCCTGCTGAGAA...GGAAGTGTCCACTGTGGGCCTAGCACAGTGCAGGAACCAGGCCAGGGGGTCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR GCA 90 bp GGGGACAACAGAGAGAAACAGAGCACTATCTGGAGGGACAGGCACACCCGCAACGGCTGCTGTTGGCCATaGCTGAGATGCGGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: GDNREKQSTIWRDRHTRNGCCWP*LRCGQA
Trigger: TGCCTGCCCGCATCTCAGGCATGGCCAACAGCAGCC...GTTGCGGGTGTGCCTGTCCCTCCAGATAGTGCTCTGTTTCTCTCTGTTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR CCA 90 bp TCAAAGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCGGGAACACAGAGTGTTaGGAGGGAGCAGAGCCCACA +
Preference number: 2 (lower is better)
Translates to: SKPWAPSAPPKSPTLQHGGNTEC*EGAEPT
Trigger: TGTGGGCTCTGCTCCCTCCCAACACTCTGTGTTCCC...GCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR CCA 90 bp AGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCTCTTCGCAGAGAAGCCCTGTaGGAACACAGAGTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: SPGPQVHLQSHLRCSMALRREAL*EHRVLG
Trigger: TCCCAACACTCTGTGTTCCCACAGGGCTTCTCTGCG...AAGAGCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR GCA 90 bp GGGGACAACAGAGAGAAACAGAGCACTATCTGGAGGGACAGGCACACCCGCAACCCCTCCTCCATGGCCTaGAACCCAATGACTATGGGG +
Preference number: 2 (lower is better)
Translates to: GDNREKQSTIWRDRHTRNPSSMA*NPMTMG
Trigger: CCCCATAGTCATTGGGTTGCAGGCCATGGAGGAGGG...GTTGCGGGTGTGCCTGTCCCTCCAGATAGTGCTCTGTTTCTCTCTGTTGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR TCA 90 bp GTTCTGACCTCTGACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCATGGCCTCTGTCCTTTaGGGTGGCCTCCAGTGTTCT +
Preference number: 2 (lower is better)
Translates to: VLTSDPTIGVSCVAEPHSMASVL*GGLQCS
Trigger: AGAACACTGGAGGCCACCTCAAAGGACAGAGGCCAT...GGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTCAGAGGTCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR TCA 90 bp AGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCTCTTAGACGGATGAAAGGGTaGAAGGGGCTGGTTCCAAAA +
Preference number: 2 (lower is better)
Translates to: SPGPQVHLQSHLRCSMALRRMKG*KGLVPK
Trigger: TTTTGGAACCAGCCCCTTTCACCCTTTCATCCGTCT...AAGAGCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR GCA 90 bp CACACAAGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAGGCCCTGTTCTTCACAGCCACTaGCACCATCTCCGCCGTGGG +
Preference number: 2 (lower is better)
Translates to: HTRAKPSTRSVTTVIKGPVLHSH*HHLRRG
Trigger: CCCACGGCGGAGATGGTGGCAGTGGCTGTGAAGAAC...AGGGCCTTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCTTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR GCA 90 bp CTTGATAGAGGAAGAGGAATATCCAAGGCAAAGCCACCACCACGTCCAACCTCCCCCTGGCCTGGTTCCTaGACTGTGCTAGGCCCACAG +
Preference number: 2 (lower is better)
Translates to: LDRGRGISKAKPPPRPTSPWPGS*TVLGPQ
Trigger: CTGTGGGCCTAGCACAGTGCAGGAACCAGGCCAGGG...GGAGGTTGGACGTGGTGGTGGCTTTGCCTTGGATATTCCTCTTCCTCTATCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR CCA 90 bp TCAAAGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCTTCTTGGAGAAGGAATaGGGACAAAGGCCAAGTGGC +
Preference number: 2 (lower is better)
Translates to: SKPWAPSAPPKSPTLQHGFLEKE*GQRPSG
Trigger: GCCACTTGGCCTTTGTCCCCATTCCTTCTCCAAGAA...GCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR CCA 90 bp TCAAAGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCAACCACAGGGATCATTaGTGGAGACTTAGCACCCAG +
Preference number: 2 (lower is better)
Translates to: SKPWAPSAPPKSPTLQHGNHRDH*WRLSTQ
Trigger: CTGGGTGCTAAGTCTCCACCAATGATCCCTGTGGTT...GCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR CCA 90 bp GGGGACAACAGAGAGAAACAGAGCACTATCTGGAGGGACAGGCACACCCGCAACCCCTGGCCCAGAGCATaGAAATTCATCTCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: GDNREKQSTIWRDRHTRNPWPRA*KFISGW
Trigger: CCAGCCAGAGATGAATTTCCATGCTCTGGGCCAGGG...GTTGCGGGTGTGCCTGTCCCTCCAGATAGTGCTCTGTTTCTCTCTGTTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR TCA 90 bp TTAATGGAGAATAGGCCCCATGGAGTGGAGGTCCCTCCTCCATGGCCTGCAACCTTGTGTTCTGACCTCTaGCCCCACCATAGGAGTGAG +
Preference number: 2 (lower is better)
Translates to: LMENRPHGVEVPPPWPATLCSDL*PHHRSE
Trigger: CTCACTCCTATGGTGGGGTCAGAGGTCAGAACACAA...GGTTGCAGGCCATGGAGGAGGGACCTCCACTCCATGGGGCCTATTCTCCATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR GCA 90 bp TTAATGGAGAATAGGCCCCATGGAGTGGAGGTCCCTCCTCCATGGCCTGCAACCTGGCCTCCAGTGTTCTaGCTGTGTGCCAGAACTGTT +
Preference number: 2 (lower is better)
Translates to: LMENRPHGVEVPPPWPATWPPVF*LCARTV
Trigger: AACAGTTCTGGCACACAGGCAGAACACTGGAGGCCA...GGTTGCAGGCCATGGAGGAGGGACCTCCACTCCATGGGGCCTATTCTCCATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR CCA 90 bp AACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAGGCCAGACTCTGTCCTTTGAGGTaGCCTCCAGTGTTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: NLQSHYLSRWESQGDEARLCPLR*PPVFCL
Trigger: CAGGCAGAACACTGGAGGCCACCTCAAAGGACAGAG...TCTGGCCTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR TCA 90 bp TTAATGGAGAATAGGCCCCATGGAGTGGAGGTCCCTCCTCCATGGCCTGCAACCCCGGAAAGTGACAGCTaGGGACACAGAATTCAGGTA +
Preference number: 2 (lower is better)
Translates to: LMENRPHGVEVPPPWPATPESDS*GHRIQV
Trigger: TACCTGAATTCTGTGTCCTCAGCTGTCACTTTCCGG...GGTTGCAGGCCATGGAGGAGGGACCTCCACTCCATGGGGCCTATTCTCCATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR GCA 90 bp TTTGAGCACACAAGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAACCCAAGCCTGACAGGTaGCTGGCTGCCCGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: FEHTRAKPSTRSVTTVIKPKPDR*LAARRE
Trigger: TTCTCTGCGGGCAGCCAGGCACCTGTCAGGCTTGGG...TTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCTTGTGTGCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR GCA 90 bp TTAATGGAGAATAGGCCCCATGGAGTGGAGGTCCCTCCTCCATGGCCTGCAACCATGAGCCCTCCCCTCTaGATTCACAGATTCTCAGCA +
Preference number: 2 (lower is better)
Translates to: LMENRPHGVEVPPPWPATMSPPL*IHRFSA
Trigger: TGCTGAGAATCTGTGAATGCAGAGGGGAGGGCTCAT...GGTTGCAGGCCATGGAGGAGGGACCTCCACTCCATGGGGCCTATTCTCCATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR CCA 90 bp CACACAAGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAGGCCCTGGAGCAGAGCCCACATaGGTGGTTTGTGTTCTGACC +
Preference number: 2 (lower is better)
Translates to: HTRAKPSTRSVTTVIKGPGAEPT*VVCVLT
Trigger: GGTCAGAACACAAACCACCCATGTGGGCTCTGCTCC...AGGGCCTTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCTTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR TCA 90 bp ACAACCCAAGGGTGGTTGAATCAAACTCAGGGAATTAGAGGAGCATCAGCCAATGGAGTCCCAGGGCGATaGGGCCAGAGTTGTGGGACA +
Preference number: 2 (lower is better)
Translates to: TTQGWLNQTQGIRGASANGVPGR*GQSCGT
Trigger: TGTCCCACAACTCTGGCCTCATCGCCCTGGGACTCC...ATTGGCTGATGCTCCTCTAATTCCCTGAGTTTGATTCAACCACCCTTGGGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR CCA 90 bp AACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAGGCCAGACCAAATGCGAAAGCATaGCCTCTGTCCTTTGAGGTG +
Preference number: 2 (lower is better)
Translates to: NLQSHYLSRWESQGDEARPNAKA*PLSFEV
Trigger: CACCTCAAAGGACAGAGGCCATGCTTTCGCATTTGG...TCTGGCCTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR CCA 90 bp AGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCTCTTCCTATTTCCAGGGCTTaGGACACCTTAGAAATGTTT +
Preference number: 2 (lower is better)
Translates to: SPGPQVHLQSHLRCSMALPISRA*DTLEMF
Trigger: AAACATTTCTAAGGTGTCCCAAGCCCTGGAAATAGG...AAGAGCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR CCA 90 bp AACCACTTCCTCCAAGGGAACATCCTTAAACAGCTTGTGGTATTGCTGGTTGTAAGAAGCGCCGGGGCCTaGCCACAGGCCATGATGCCA +
Preference number: 2 (lower is better)
Translates to: NHFLQGNILKQLVVLLVVRSAGA*PQAMMP
Trigger: TGGCATCATGGCCTGTGGCCAGGCCCCGGCGCTTCT...TACAACCAGCAATACCACAAGCTGTTTAAGGATGTTCCCTTGGAGGAAGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562288.1
3UTR-3UTR GCA 90 bp CACACAAGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAGGCCCTGAGCCACATTCCAAATaGGAAAGCATGGCCTCTGTC +
Preference number: 2 (lower is better)
Translates to: HTRAKPSTRSVTTVIKGPEPHSK*ESMASV
Trigger: GACAGAGGCCATGCTTTCGCATTTGGAATGTGGCTC...AGGGCCTTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCTTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR GCA 90 bp AACCACTTCCTCCAAGGGAACATCCTTAAACAGCTTGTGGTATTGCTGGTTGTACTGTGGCCTGAGCTCTaGTGCGGGGAGCTTGGCACA +
Preference number: 2 (lower is better)
Translates to: NHFLQGNILKQLVVLLVVLWPEL*CGELGT
Trigger: TGTGCCAAGCTCCCCGCAGCAGAGCTCAGGCCACAG...TACAACCAGCAATACCACAAGCTGTTTAAGGATGTTCCCTTGGAGGAAGTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562288.1
3UTR-3UTR CCA 90 bp TTTGAGCACACAAGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAACCACCATCTCCGCCGTaGGCAGCATCTCCCCATAAT +
Preference number: 2 (lower is better)
Translates to: FEHTRAKPSTRSVTTVIKPPSPP*AASPHN
Trigger: ATTATGGGGAGATGCTGCCCACGGCGGAGATGGTGG...TTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCTTGTGTGCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR GCA 90 bp CACTTCCTCCAAGGGAACATCCTTAAACAGCTTGTGGTATTGCTGGTTGTATTTTGGCCTGAGCTCTGCTaGGGGGAGCTTGGCACAGAC +
Preference number: 2 (lower is better)
Translates to: HFLQGNILKQLVVLLVVFWPELC*GELGTD
Trigger: GTCTGTGCCAAGCTCCCCGCAGCAGAGCTCAGGCCA...AAATACAACCAGCAATACCACAAGCTGTTTAAGGATGTTCCCTTGGAGGAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562288.1
3UTR-3UTR CCA 90 bp CTTGATAGAGGAAGAGGAATATCCAAGGCAAAGCCACCACCACGTCCAACCTCCCACAGGGATCATTGGTaGAGACTTAGCACCCAGAAC +
Preference number: 2 (lower is better)
Translates to: LDRGRGISKAKPPPRPTSHRDHW*RLSTQN
Trigger: GTTCTGGGTGCTAAGTCTCCACCAATGATCCCTGTG...GGAGGTTGGACGTGGTGGTGGCTTTGCCTTGGATATTCCTCTTCCTCTATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR CCA 90 bp GACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCAAATGCGAAAGCGGAGGAGGAGGGATCTaGAATATTTTCCTTCATAGG +
Preference number: 2 (lower is better)
Translates to: DPTIGVSCVAEPHSKCESGGGGI*NIFLHR
Trigger: CCTATGAAGGAAAATATTCCAGATCCCTCCTCCTCC...GCTTTCGCATTTGGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR TCA 90 bp TGGTTGTATTTATTCAGTGTTATCCCTTCTCGGCCACACTTCTTTATCTCTTCACCTGGCCACAGGCCATaGTGCCAGCAGGACTGCCCT +
Preference number: 2 (lower is better)
Translates to: WLYLFSVIPSRPHFFISSPGHRP*CQQDCP
Trigger: AGGGCAGTCCTGCTGGCATCATGGCCTGTGGCCAGG...TGAAGAGATAAAGAAGTGTGGCCGAGAAGGGATAACACTGAATAAATACAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562288.1
3UTR-3UTR GCA 90 bp ACAACCCAAGGGTGGTTGAATCAAACTCAGGGAATTAGAGGAGCATCAGCCAATAGTGATCAAAGGCCCTaGTCCACTTGTCTCACCGGA +
Preference number: 2 (lower is better)
Translates to: TTQGWLNQTQGIRGASANSDQRP*STCLTG
Trigger: TCCGGTGAGACAAGTGGAGCAGGGCCTTTGATCACT...ATTGGCTGATGCTCCTCTAATTCCCTGAGTTTGATTCAACCACCCTTGGGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR TCA 90 bp AGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAGGCCCTGCTCCATCTCTAAGTGTTTGCTaGAGCTTTGTGTACAGAATT +
Preference number: 2 (lower is better)
Translates to: RAKPSTRSVTTVIKGPAPSLSVC*SFVYRI
Trigger: AATTCTGTACACAAAGCTTCAGCAAACACTTAGAGA...TGGAGCAGGGCCTTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR GCA 90 bp ACAACCCAAGGGTGGTTGAATCAAACTCAGGGAATTAGAGGAGCATCAGCCAATAGTGTTCTGCCTGTGTaGCAGAACTGTTTCCAAGGA +
Preference number: 2 (lower is better)
Translates to: TTQGWLNQTQGIRGASANSVLPV*QNCFQG
Trigger: TCCTTGGAAACAGTTCTGGCACACAGGCAGAACACT...ATTGGCTGATGCTCCTCTAATTCCCTGAGTTTGATTCAACCACCCTTGGGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR TCA 90 bp ACAACCCAAGGGTGGTTGAATCAAACTCAGGGAATTAGAGGAGCATCAGCCAATACCAGGGAGAAGTGCTaGAGCAAGAAGGGTTATTTT +
Preference number: 2 (lower is better)
Translates to: TTQGWLNQTQGIRGASANTREKC*SKKGYF
Trigger: AAAATAACCCTTCTTGCTTCAGCACTTCTCCCTGGT...ATTGGCTGATGCTCCTCTAATTCCCTGAGTTTGATTCAACCACCCTTGGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR CAA 90 bp ATAGACCCCCTGGCCTGGTTCCTGCACTGTGCTAGGCCCACAGTGGACACTTCCCTCAACGGGCTGCTGTaGGCCATGCCTGAGATGCGG +
Preference number: 3 (lower is better)
Translates to: IDPLAWFLHCARPTVDTSLNGLL*AMPEMR
Trigger: CCGCATCTCAGGCATGGCCAACAGCAGCCCGTTGAG...GGAAGTGTCCACTGTGGGCCTAGCACAGTGCAGGAACCAGGCCAGGGGGTCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR GCA 72 bp GGCACACCCGCAACACTCAAAGCCCTGGGCCCCAAGTaGACCTCCAAAGTCACCTACGCTGCAGCATGGCTC +
Preference number: 3 (lower is better)
Translates to: GTPATLKALGPK*TSKVTYAAAWL
Trigger: GAGCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCTTTGAGTGTTGCGGGTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 72 bp CTGGAGGGACAGGCACACCCGCAACACTCAAAGCCCTaGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTG +
Preference number: 3 (lower is better)
Translates to: LEGQAHPQHSKP*APSAPPKSPTL
Trigger: CAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCTTTGAGTGTTGCGGGTGTGCCTGTCCCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR GCA 72 bp TCTCTGGCTGGAATCCTGGCCATGAGCCCTCCCCTCTaGATTCACAGATTCTCAGCAGGCCCCTGCCCAAGC +
Preference number: 3 (lower is better)
Translates to: SLAGILAMSPPL*IHRFSAGPCPS
Trigger: GCTTGGGCAGGGGCCTGCTGAGAATCTGTGAATGCAGAGGGGAGGGCTCATGGCCAGGATTCCAGCCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 72 bp CTCTGTTCTTCACAGCCACTGCCACCATCTCCGCCGTaGGCAGCATCTCCCCATAATGCAGCCAGCCACCTC +
Preference number: 3 (lower is better)
Translates to: LCSSQPLPPSPP*AASPHNAASHL
Trigger: GAGGTGGCTGGCTGCATTATGGGGAGATGCTGCCCACGGCGGAGATGGTGGCAGTGGCTGTGAAGAACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR CAA 90 bp TCAAAGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCCATGGCCTCTGTCCTTaGAGGTGGCCTCCAGTGTTC +
Preference number: 3 (lower is better)
Translates to: SKPWAPSAPPKSPTLQHGHGLCP*RWPPVF
Trigger: GAACACTGGAGGCCACCTCAAAGGACAGAGGCCATG...GCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 72 bp TCCTGTCCCCAGAGGTATGAGATAGACCCCCTGGCCTaGTTCCTGCACTGTGCTAGGCCCACAGTGGACACT +
Preference number: 3 (lower is better)
Translates to: SCPQRYEIDPLA*FLHCARPTVDT
Trigger: AGTGTCCACTGTGGGCCTAGCACAGTGCAGGAACCAGGCCAGGGGGTCTATCTCATACCTCTGGGGACAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR CAA 90 bp AGGCAGGGAGTGGACAGCAAGACCTCAGATCCAAGCCTCCACCCTTCCCTTCCCAAGGCCCTGCTCCACTaGTCTCACCGGAAAGTGACA +
Preference number: 3 (lower is better)
Translates to: RQGVDSKTSDPSLHPSLPKALLH*SHRKVT
Trigger: TGTCACTTTCCGGTGAGACAAGTGGAGCAGGGCCTT...GGGAAGGGAAGGGTGGAGGCTTGGATCTGAGGTCTTGCTGTCCACTCCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR TCA 72 bp CCTCCTCATCCTCTACCTTTCCTGTCCCCAGAGGTATaGGATAGACCCCCTGGCCTGGTTCCTGCACTGTGC +
Preference number: 3 (lower is better)
Translates to: PPHPLPFLSPEV*DRPPGLVPALC
Trigger: GCACAGTGCAGGAACCAGGCCAGGGGGTCTATCTCATACCTCTGGGGACAGGAAAGGTAGAGGATGAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 72 bp CCCTTCCAGAACCTCCAAAGCCACTATCTTAGCAGATaGGAGTCCCAGGGCGATGAGGCCAGAGTTGTGGGA +
Preference number: 3 (lower is better)
Translates to: PFQNLQSHYLSR*ESQGDEARVVG
Trigger: TCCCACAACTCTGGCCTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTTCTGGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 72 bp AGGCAGGGGGACAACAGAGAGAAACAGAGCACTATCTaGAGGGACAGGCACACCCGCAACACTCAAAGCCCT +
Preference number: 3 (lower is better)
Translates to: RQGDNREKQSTI*RDRHTRNTQSP
Trigger: AGGGCTTTGAGTGTTGCGGGTGTGCCTGTCCCTCCAGATAGTGCTCTGTTTCTCTCTGTTGTCCCCCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 72 bp GCTGTGTGGCAGAGCCACATTCCAAATGCGAAAGCATaGCCTCTGTCCTTTGAGGTGGCCTCCAGTGTTCTG +
Preference number: 3 (lower is better)
Translates to: AVWQSHIPNAKA*PLSFEVASSVL
Trigger: CAGAACACTGGAGGCCACCTCAAAGGACAGAGGCCATGCTTTCGCATTTGGAATGTGGCTCTGCCACACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 72 bp CCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATaGCTCTTGCCCTTTCTGAGCCTGGGTATAGCTGAA +
Preference number: 3 (lower is better)
Translates to: PKCTSKVTYAAA*LLPFLSLGIAE
Trigger: TTCAGCTATACCCAGGCTCAGAAAGGGCAAGAGCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR TCA 72 bp CCACATTCCAAATGCGAAAGCATGGCCTCTGTCCTTTaGGGTGGCCTCCAGTGTTCTGCCTGTGTGCCAGAA +
Preference number: 3 (lower is better)
Translates to: PHSKCESMASVL*GGLQCSACVPE
Trigger: TTCTGGCACACAGGCAGAACACTGGAGGCCACCTCAAAGGACAGAGGCCATGCTTTCGCATTTGGAATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR TCA 72 bp ATGACTATGGGGGTGACACAAGTGACCTCTGCCCTGTaGTGGCTCAACACCATCACACGCAACTGTCCAGAC +
Preference number: 3 (lower is better)
Translates to: MTMGVTQVTSAL*WLNTITRNCPD
Trigger: GTCTGGACAGTTGCGTGTGATGGTGTTGAGCCATCACAGGGCAGAGGTCACTTGTGTCACCCCCATAGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR CAA 90 bp TTAATGGAGAATAGGCCCCATGGAGTGGAGGTCCCTCCTCCATGGCCTGCAACCCCCTATTTCCAGGGCTaGGGACACCTTAGAAATGTT +
Preference number: 3 (lower is better)
Translates to: LMENRPHGVEVPPPWPATPYFQG*GHLRNV
Trigger: AACATTTCTAAGGTGTCCCAAGCCCTGGAAATAGGG...GGTTGCAGGCCATGGAGGAGGGACCTCCACTCCATGGGGCCTATTCTCCATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR TCA 72 bp GGCCCTGCTCCACTTGTCTCACCGGAAAGTGACAGCTaGGGACACAGAATTCAGGTACCTCTGTTCTTCACA +
Preference number: 3 (lower is better)
Translates to: GPAPLVSPESDS*GHRIQVPLFFT
Trigger: TGTGAAGAACAGAGGTACCTGAATTCTGTGTCCTCAGCTGTCACTTTCCGGTGAGACAAGTGGAGCAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 72 bp CAAGTTCACCAGCATCTTGGCACATCCACCTATAACTaGCACCTCTCATGGCCTCTGACAACCAAGCAAGGC +
Preference number: 3 (lower is better)
Translates to: QVHQHLGTSTYN*HLSWPLTTKQG
Trigger: GCCTTGCTTGGTTGTCAGAGGCCATGAGAGGTGCCAGTTATAGGTGGATGTGCCAAGATGCTGGTGAACTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 72 bp CATCTTGGCACATCCACCTATAACTGGCACCTCTCATaGCCTCTGACAACCAAGCAAGGCTCAGAGAATGGA +
Preference number: 3 (lower is better)
Translates to: HLGTSTYNWHLS*PLTTKQGSENG
Trigger: TCCATTCTCTGAGCCTTGCTTGGTTGTCAGAGGCCATGAGAGGTGCCAGTTATAGGTGGATGTGCCAAGATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR CAA 90 bp AGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAGGCCCTGCTCCAGTGTTTGCTGAAGCTTaGTGTACAGAATTCCTCAGT +
Preference number: 3 (lower is better)
Translates to: RAKPSTRSVTTVIKGPAPVFAEA*CTEFLS
Trigger: ACTGAGGAATTCTGTACACAAAGCTTCAGCAAACAC...TGGAGCAGGGCCTTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR-3UTR CAA 90 bp GGGGACAACAGAGAGAAACAGAGCACTATCTGGAGGGACAGGCACACCCGCAACGTTTTCTCTAAGTGTTaGCTGAAGCTTTGTGTACAG +
Preference number: 3 (lower is better)
Translates to: GDNREKQSTIWRDRHTRNVFSKC*LKLCVQ
Trigger: CTGTACACAAAGCTTCAGCAAACACTTAGAGAAAAC...GTTGCGGGTGTGCCTGTCCCTCCAGATAGTGCTCTGTTTCTCTCTGTTGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR TCA 72 bp GCACATCCACCTATAACTGGCACCTCTCATGGCCTCTaGCAACCAAGCAAGGCTCAGAGAATGGATTTTTAT +
Preference number: 3 (lower is better)
Translates to: AHPPITGTSHGL*QPSKAQRMDFY
Trigger: ATAAAAATCCATTCTCTGAGCCTTGCTTGGTTGTCAGAGGCCATGAGAGGTGCCAGTTATAGGTGGATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR TCA 72 bp AAGGCTAAGGCCATAGCAAAACAACCCAAGGGTGGTTaGATCAAACTCAGGGAATTAGAGGAGCATCAGCCA +
Preference number: 3 (lower is better)
Translates to: KAKAIAKQPKGG*IKLRELEEHQP
Trigger: TGGCTGATGCTCCTCTAATTCCCTGAGTTTGATTCAACCACCCTTGGGTTGTTTTGCTATGGCCTTAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CCA 72 bp AGAGACCACTTACTGGTAGTCCCTCCAATTCTCATTTaGGTTTGTCATAAACAGGACAGACAGTCGTCTGCT +
Preference number: 3 (lower is better)
Translates to: RDHLLVVPPILI*VCHKQDRQSSA
Trigger: AGCAGACGACTGTCTGTCCTGTTTATGACAAACCCAAATGAGAATTGGAGGGACTACCAGTAAGTGGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR TCA 72 bp CTAAATTTCATCCTAAAAACTGGGATGGGGAGAGCATaGAGAGACCACTTACTGGTAGTCCCTCCAATTCTC +
Preference number: 3 (lower is better)
Translates to: LNFILKTGMGRA*RDHLLVVPPIL
Trigger: GAGAATTGGAGGGACTACCAGTAAGTGGTCTCTTCATGCTCTCCCCATCCCAGTTTTTAGGATGAAATTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp AGGCAGGGAGTGGACAGCAAGACCTCAGATCCAAGCCTCCACCCTTCCCTTCCCTTCTCAGCAGGCCCCTaGCCAAGCCTGACAGGTGCC +
Preference number: 4 (lower is better)
Translates to: RQGVDSKTSDPSLHPSLPFSAGP*PSLTGA
Trigger: GGCACCTGTCAGGCTTGGGCAGGGGCCTGCTGAGAA...GGGAAGGGAAGGGTGGAGGCTTGGATCTGAGGTCTTGCTGTCCACTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp CACACAAGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAGGCCCTCAGCCAGCCACCTCATaGGGGGCCGGCACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: HTRAKPSTRSVTTVIKGPQPATS*GAGTEP
Trigger: GGGCTCTGTGCCGGCCCCTCATGAGGTGGCTGGCTG...AGGGCCTTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCTTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp TTAATGGAGAATAGGCCCCATGGAGTGGAGGTCCCTCCTCCATGGCCTGCAACCGCTGTTGGCCATGCCTaGGATGCGGGCAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LMENRPHGVEVPPPWPATAVGHA*DAGRQA
Trigger: TGCCTGCCTGCCCGCATCTCAGGCATGGCCAACAGC...GGTTGCAGGCCATGGAGGAGGGACCTCCACTCCATGGGGCCTATTCTCCATTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp AGGCAGGGAGTGGACAGCAAGACCTCAGATCCAAGCCTCCACCCTTCCCTTCCCCTGTCCCCAGAGGTATaGGATAGACCCCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: RQGVDSKTSDPSLHPSLPLSPEV*DRPPGL
Trigger: CAGGCCAGGGGGTCTATCTCATACCTCTGGGGACAG...GGGAAGGGAAGGGTGGAGGCTTGGATCTGAGGTCTTGCTGTCCACTCCCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp GTTCTGACCTCTGACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCTGCCGCCCTCCTCGGTaGCCTCGCTCCGGCTTAAAG +
Preference number: 4 (lower is better)
Translates to: VLTSDPTIGVSCVAEPHSCRPPR*PRSGLK
Trigger: CTTTAAGCCGGAGCGAGGCCACCGAGGAGGGCGGCA...GGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTCAGAGGTCAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp CCTTCCAGAACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGGGCAGGACCCCAGCCTaGCATGGGCCATGCCCACCT +
Preference number: 4 (lower is better)
Translates to: PSRTSKATILADGSPRAMGRTPA*HGPCPP
Trigger: AGGTGGGCATGGCCCATGCCAGGCTGGGGTCCTGCC...CATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTTCTGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp TTAATGGAGAATAGGCCCCATGGAGTGGAGGTCCCTCCTCCATGGCCTGCAACCGGAGTCCCAGGGCGATaGGGCCAGAGTTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: LMENRPHGVEVPPPWPATGVPGR*GQSCGT
Trigger: TGTCCCACAACTCTGGCCTCATCGCCCTGGGACTCC...GGTTGCAGGCCATGGAGGAGGGACCTCCACTCCATGGGGCCTATTCTCCATTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp GACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCAAATGCGAAAGCGCCTCAGCTCCCCAGTaGTCCTGGGCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: DPTIGVSCVAEPHSKCESASAPQ*SWAPPP
Trigger: TGGAGGAGGAGCCCAGGAGCACTGGGGAGCTGAGGC...GCTTTCGCATTTGGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp GGGGACAACAGAGAGAAACAGAGCACTATCTGGAGGGACAGGCACACCCGCAACCCCAAGCCTGACAGGTaGCTGGCTGCCCGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: GDNREKQSTIWRDRHTRNPKPDR*LAARRE
Trigger: TTCTCTGCGGGCAGCCAGGCACCTGTCAGGCTTGGG...GTTGCGGGTGTGCCTGTCCCTCCAGATAGTGCTCTGTTTCTCTCTGTTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp TCAAAGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCGGGACAAAGGCCAAGTaGCTGTTACCTGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SKPWAPSAPPKSPTLQHGGTKAK*LLPVPR
Trigger: CCTGGGCACAGGTAACAGCCACTTGGCCTTTGTCCC...GCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp TTAATGGAGAATAGGCCCCATGGAGTGGAGGTCCCTCCTCCATGGCCTGCAACCGTTCTTCACAGCCACTaGCACCATCTCCGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LMENRPHGVEVPPPWPATVLHSH*HHLRRG
Trigger: CCCACGGCGGAGATGGTGGCAGTGGCTGTGAAGAAC...GGTTGCAGGCCATGGAGGAGGGACCTCCACTCCATGGGGCCTATTCTCCATTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp TTAATGGAGAATAGGCCCCATGGAGTGGAGGTCCCTCCTCCATGGCCTGCAACCTCAACGGGCTGCTGTTaGCCATGCCTGAGATGCGGG +
Preference number: 4 (lower is better)
Translates to: LMENRPHGVEVPPPWPATSTGCC*PCLRCG
Trigger: CCCGCATCTCAGGCATGGCCAACAGCAGCCCGTTGA...GGTTGCAGGCCATGGAGGAGGGACCTCCACTCCATGGGGCCTATTCTCCATTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp TTAATGGAGAATAGGCCCCATGGAGTGGAGGTCCCTCCTCCATGGCCTGCAACCATAGGCCCCATGGAGTaGAGGTCCCTCCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: LMENRPHGVEVPPPWPATIGPME*RSLLHG
Trigger: GCCATGGAGGAGGGACCTCCACTCCATGGGGCCTAT...GGTTGCAGGCCATGGAGGAGGGACCTCCACTCCATGGGGCCTATTCTCCATTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp ATAGACCCCCTGGCCTGGTTCCTGCACTGTGCTAGGCCCACAGTGGACACTTCCACCTACGCTGCAGCATaGCTCTTGCCCTTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: IDPLAWFLHCARPTVDTSTYAAA*LLPFLS
Trigger: GCTCAGAAAGGGCAAGAGCCATGCTGCAGCGTAGGT...GGAAGTGTCCACTGTGGGCCTAGCACAGTGCAGGAACCAGGCCAGGGGGTCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp ATAGACCCCCTGGCCTGGTTCCTGCACTGTGCTAGGCCCACAGTGGACACTTCCGGTAGGATGAGGACATaGCCAGGAAGCAGATCAGCA +
Preference number: 4 (lower is better)
Translates to: IDPLAWFLHCARPTVDTSGRMRT*PGSRSA
Trigger: TGCTGATCTGCTTCCTGGTCATGTCCTCATCCTACC...GGAAGTGTCCACTGTGGGCCTAGCACAGTGCAGGAACCAGGCCAGGGGGTCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp GTTCTGACCTCTGACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCAGTGGCTGTTACCTGTaGCCAGGGACTGGGTCATCC +
Preference number: 4 (lower is better)
Translates to: VLTSDPTIGVSCVAEPHSSGCYL*PGTGSS
Trigger: GGATGACCCAGTCCCTGGGCACAGGTAACAGCCACT...GGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTCAGAGGTCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp ATAGACCCCCTGGCCTGGTTCCTGCACTGTGCTAGGCCCACAGTGGACACTTCCCAAAGTCACCTACGCTaGAGCATGGCTCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: IDPLAWFLHCARPTVDTSQSHLR*SMALAL
Trigger: AAGGGCAAGAGCCATGCTGCAGCGTAGGTGACTTTG...GGAAGTGTCCACTGTGGGCCTAGCACAGTGCAGGAACCAGGCCAGGGGGTCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp AGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAGGCCCTGCTCCAGCCCTGGGCCCCAAGTaGACCTCCAAAGTCACCTAC +
Preference number: 4 (lower is better)
Translates to: RAKPSTRSVTTVIKGPAPALGPK*TSKVTY
Trigger: GTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGC...TGGAGCAGGGCCTTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp TCAAAGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCTTTCTGTGCATTTGTTaGTTGCCGCCCTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: SKPWAPSAPPKSPTLQHGFLCIC*LPPSSV
Trigger: CACCGAGGAGGGCGGCAACCAACAAATGCACAGAAA...GCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp AGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAGGCCCTGCTCCAGGAAGCAGAGCCAGTTaGGGGAGATGTAGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: RAKPSTRSVTTVIKGPAPGSRAS*GRCRAG
Trigger: GCCGGCTCTACATCTCCCCCAACTGGCTCTGCTTCC...TGGAGCAGGGCCTTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp ATAGACCCCCTGGCCTGGTTCCTGCACTGTGCTAGGCCCACAGTGGACACTTCCTCAGACTCTTCTTGCTaGAAGGCTGTAGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: IDPLAWFLHCARPTVDTSSDSSC*KAVGGC
Trigger: GCACCCACCTACAGCCTTCCAGCAAGAAGAGTCTGA...GGAAGTGTCCACTGTGGGCCTAGCACAGTGCAGGAACCAGGCCAGGGGGTCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp CCTTCCAGAACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGGGCTGGTGTTGGTGGTaGTGGCCAGTCCATTGGGAA +
Preference number: 4 (lower is better)
Translates to: PSRTSKATILADGSPRAMGWCWW*WPVHWE
Trigger: TTCCCAATGGACTGGCCATCACCACCAACACCAGCC...CATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTTCTGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp AGGCAGGGAGTGGACAGCAAGACCTCAGATCCAAGCCTCCACCCTTCCCTTCCCGTCCCGGGAGAGCAGTaGCACAAAGATATACTTCTG +
Preference number: 4 (lower is better)
Translates to: RQGVDSKTSDPSLHPSLPVPGEQ*HKDILL
Trigger: CAGAAGTATATCTTTGTGTCACTGCTCTCCCGGGAC...GGGAAGGGAAGGGTGGAGGCTTGGATCTGAGGTCTTGCTGTCCACTCCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp CACACAAGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAGGCCCTCTGGAATCCTGGCCATaGGCCCTCCCCTCTGCATTC +
Preference number: 4 (lower is better)
Translates to: HTRAKPSTRSVTTVIKGPLESWP*ALPSAF
Trigger: GAATGCAGAGGGGAGGGCTCATGGCCAGGATTCCAG...AGGGCCTTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCTTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp AGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCTCTTCCGGAAAGTGACAGCTaGGGACACAGAATTCAGGTA +
Preference number: 4 (lower is better)
Translates to: SPGPQVHLQSHLRCSMALPESDS*GHRIQV
Trigger: TACCTGAATTCTGTGTCCTCAGCTGTCACTTTCCGG...AAGAGCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp CTTGATAGAGGAAGAGGAATATCCAAGGCAAAGCCACCACCACGTCCAACCTCCGGCTGCTGTTGGCCATaGCTGAGATGCGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LDRGRGISKAKPPPRPTSGCCWP*LRCGQA
Trigger: TGCCTGCCCGCATCTCAGGCATGGCCAACAGCAGCC...GGAGGTTGGACGTGGTGGTGGCTTTGCCTTGGATATTCCTCTTCCTCTATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp AGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAGGCCCTGCTCCACCCTCCTCCATGGCCTaGAACCCAATGACTATGGGG +
Preference number: 4 (lower is better)
Translates to: RAKPSTRSVTTVIKGPAPPSSMA*NPMTMG
Trigger: CCCCATAGTCATTGGGTTGCAGGCCATGGAGGAGGG...TGGAGCAGGGCCTTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp GGGGACAACAGAGAGAAACAGAGCACTATCTGGAGGGACAGGCACACCCGCAACAGGAGGAAGTCCCTCTaGAGGGCACAGGAACACACT +
Preference number: 4 (lower is better)
Translates to: GDNREKQSTIWRDRHTRNRRKSL*RAQEHT
Trigger: AGTGTGTTCCTGTGCCCTCCAGAGGGACTTCCTCCT...GTTGCGGGTGTGCCTGTCCCTCCAGATAGTGCTCTGTTTCTCTCTGTTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp GACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCAAATGCGAAAGCCTGGAAGGCTGTAGGTaGGTGCAGACTCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: DPTIGVSCVAEPHSKCESLEGCR*VQTLLS
Trigger: GCTGAGGAGAGTCTGCACCCACCTACAGCCTTCCAG...GCTTTCGCATTTGGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp AACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAGGCCAGACCTGTGCCCAGGGACTaGGTCATCCCAACTCAAGGA +
Preference number: 4 (lower is better)
Translates to: NLQSHYLSRWESQGDEARPVPRD*VIPTQG
Trigger: TCCTTGAGTTGGGATGACCCAGTCCCTGGGCACAGG...TCTGGCCTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp GGGGACAACAGAGAGAAACAGAGCACTATCTGGAGGGACAGGCACACCCGCAACCTCTGTCCTTTGAGGTaGCCTCCAGTGTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GDNREKQSTIWRDRHTRNLCPLR*PPVFCL
Trigger: CAGGCAGAACACTGGAGGCCACCTCAAAGGACAGAG...GTTGCGGGTGTGCCTGTCCCTCCAGATAGTGCTCTGTTTCTCTCTGTTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp GTTTGTGTTCTGACCTCTGACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCAGGGAACACAGAGTGTTaGGAGGGAGCAGAGCCCACA +
Preference number: 4 (lower is better)
Translates to: VCVLTSDPTIGVSCVAEPGNTEC*EGAEPT
Trigger: TGTGGGCTCTGCTCCCTCCCAACACTCTGTGTTCCC...TGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTCAGAGGTCAGAACACAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp AACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAGGCCAGACCACCATCTCCGCCGTaGGCAGCATCTCCCCATAAT +
Preference number: 4 (lower is better)
Translates to: NLQSHYLSRWESQGDEARPPSPP*AASPHN
Trigger: ATTATGGGGAGATGCTGCCCACGGCGGAGATGGTGG...TCTGGCCTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp TTAATGGAGAATAGGCCCCATGGAGTGGAGGTCCCTCCTCCATGGCCTGCAACCAAGAGGGGAAAACAGTaGCTGCTTCTGACACCGCCC +
Preference number: 4 (lower is better)
Translates to: LMENRPHGVEVPPPWPATKRGKQ*LLLTPP
Trigger: GGGCGGTGTCAGAAGCAGCCACTGTTTTCCCCTCTT...GGTTGCAGGCCATGGAGGAGGGACCTCCACTCCATGGGGCCTATTCTCCATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp TCAAAGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCACATCCACCTATAACTaGCACCTCTCATGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SKPWAPSAPPKSPTLQHGTSTYN*HLSWPL
Trigger: CAGAGGCCATGAGAGGTGCCAGTTATAGGTGGATGT...GCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp GACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCAAATGCGAAAGCCAACACTCAAAGCCCTaGGCCCCAAGTGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: DPTIGVSCVAEPHSKCESQHSKP*APSAPP
Trigger: TGGAGGTGCACTTGGGGCCCAGGGCTTTGAGTGTTG...GCTTTCGCATTTGGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp GTTCTGACCTCTGACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCAAACAGAGCACTATCTaGAGGGACAGGCACACCCGC +
Preference number: 4 (lower is better)
Translates to: VLTSDPTIGVSCVAEPHSKQSTI*RDRHTR
Trigger: GCGGGTGTGCCTGTCCCTCCAGATAGTGCTCTGTTT...GGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTCAGAGGTCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp GTTTGTGTTCTGACCTCTGACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCAGAACGCCAGGTAGGATaGGGACATGACCAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: VCVLTSDPTIGVSCVAEPERQVG*GHDQEA
Trigger: TGCTTCCTGGTCATGTCCTCATCCTACCTGGCGTTC...TGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTCAGAGGTCAGAACACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp AGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAGGCCCTGCTCCAATGGCCTCTGTCCTTTaGGGTGGCCTCCAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: RAKPSTRSVTTVIKGPAPMASVL*GGLQCS
Trigger: AGAACACTGGAGGCCACCTCAAAGGACAGAGGCCAT...TGGAGCAGGGCCTTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp CCTTCCAGAACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGGTGACCTCTGCCCTGTaGTGGCTCAACACCATCACA +
Preference number: 4 (lower is better)
Translates to: PSRTSKATILADGSPRAMVTSAL*WLNTIT
Trigger: TGTGATGGTGTTGAGCCATCACAGGGCAGAGGTCAC...CATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTTCTGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp CTTGATAGAGGAAGAGGAATATCCAAGGCAAAGCCACCACCACGTCCAACCTCCAACAGTGGCTGCTTCTaGCACCGCCCACCCCATCAC +
Preference number: 4 (lower is better)
Translates to: LDRGRGISKAKPPPRPTSNSGCF*HRPPHH
Trigger: GTGATGGGGTGGGCGGTGTCAGAAGCAGCCACTGTT...GGAGGTTGGACGTGGTGGTGGCTTTGCCTTGGATATTCCTCTTCCTCTATCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp CCTTCCAGAACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGACCTCTCATGGCCTCTaGCAACCAAGCAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PSRTSKATILADGSPRAMTSHGL*QPSKAQ
Trigger: CTGAGCCTTGCTTGGTTGTCAGAGGCCATGAGAGGT...CATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTTCTGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp GACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCAAATGCGAAAGCAAGGCTGTAGGTGGGTaGAGACTCTCCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: DPTIGVSCVAEPHSKCESKAVGG*RLSSAG
Trigger: ACCTGCTGAGGAGAGTCTGCACCCACCTACAGCCTT...GCTTTCGCATTTGGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp GGGGACAACAGAGAGAAACAGAGCACTATCTGGAGGGACAGGCACACCCGCAACTGGCCTCCAGTGTTCTaGCTGTGTGCCAGAACTGTT +
Preference number: 4 (lower is better)
Translates to: GDNREKQSTIWRDRHTRNWPPVF*LCARTV
Trigger: AACAGTTCTGGCACACAGGCAGAACACTGGAGGCCA...GTTGCGGGTGTGCCTGTCCCTCCAGATAGTGCTCTGTTTCTCTCTGTTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp GACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCAAATGCGAAAGCCCTTGCCAAAGAGGCTaGCATGGAAGCAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: DPTIGVSCVAEPHSKCESPCQRG*HGSRAS
Trigger: ACTGGCTCTGCTTCCATGCCAGCCTCTTTGGCAAGG...GCTTTCGCATTTGGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp CCTTCCAGAACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGCGCAGAGAAGCCCTGTaGGAACACAGAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: PSRTSKATILADGSPRAMRREAL*EHRVLG
Trigger: TCCCAACACTCTGTGTTCCCACAGGGCTTCTCTGCG...CATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTTCTGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp AGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAGGCCCTGCTCCATGTGGAGTCCACGGATaGTGGAGGGATACAAGGGAT +
Preference number: 4 (lower is better)
Translates to: RAKPSTRSVTTVIKGPAPCGVHG*WRDTRD
Trigger: ATCCCTTGTATCCCTCCATCATCCGTGGACTCCACA...TGGAGCAGGGCCTTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp CCTTCCAGAACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGGCACAAAGAAGACCTTaGGGAGCCGGTAATCCCAGA +
Preference number: 4 (lower is better)
Translates to: PSRTSKATILADGSPRAMAQRRP*GAGNPR
Trigger: TCTGGGATTACCGGCTCCTCAAGGTCTTCTTTGTGC...CATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTTCTGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp AACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAGGCCAGATTGTGTTCTGACCTCTaGCCCCACCATAGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: NLQSHYLSRWESQGDEARLCSDL*PHHRSE
Trigger: CTCACTCCTATGGTGGGGTCAGAGGTCAGAACACAA...TCTGGCCTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp TTAATGGAGAATAGGCCCCATGGAGTGGAGGTCCCTCCTCCATGGCCTGCAACCAGACGGATGAAAGGGTaGAAGGGGCTGGTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LMENRPHGVEVPPPWPATRRMKG*KGLVPK
Trigger: TTTTGGAACCAGCCCCTTTCACCCTTTCATCCGTCT...GGTTGCAGGCCATGGAGGAGGGACCTCCACTCCATGGGGCCTATTCTCCATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp AGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCTCTTACCAGGGAGAAGTGCTaGAGCAAGAAGGGTTATTTT +
Preference number: 4 (lower is better)
Translates to: SPGPQVHLQSHLRCSMALTREKC*SKKGYF
Trigger: AAAATAACCCTTCTTGCTTCAGCACTTCTCCCTGGT...AAGAGCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp GGGGACAACAGAGAGAAACAGAGCACTATCTGGAGGGACAGGCACACCCGCAACGAGCCACATTCCAAATaGGAAAGCATGGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GDNREKQSTIWRDRHTRNEPHSK*ESMASV
Trigger: GACAGAGGCCATGCTTTCGCATTTGGAATGTGGCTC...GTTGCGGGTGTGCCTGTCCCTCCAGATAGTGCTCTGTTTCTCTCTGTTGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp AACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAGGCCAGAACCCTTCAAGCCTTCTaGCCAGTGCAGACTGTAGTC +
Preference number: 4 (lower is better)
Translates to: NLQSHYLSRWESQGDEARTLQAF*PVQTVV
Trigger: GACTACAGTCTGCACTGGCCAGAAGGCTTGAAGGGT...TCTGGCCTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp AACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAGGCCAGAACAAGGGATGTTGTCTaGGAGAGACAGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: NLQSHYLSRWESQGDEARTRDVV*ERQGPG
Trigger: TCCAGGTCCCTGTCTCTCCCAGACAACATCCCTTGT...TCTGGCCTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp GTTTGTGTTCTGACCTCTGACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACACTATCTTAGCAGATaGGAGTCCCAGGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: VCVLTSDPTIGVSCVAEPHYLSR*ESQGDE
Trigger: CTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTG...TGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTCAGAGGTCAGAACACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
3UTR CAA 72 bp TGCACCTCCAAAGTCACCTACGCTGCAGCATGGCTCTaGCCCTTTCTGAGCCTGGGTATAGCTGAAGACCAA +
Preference number: 4 (lower is better)
Translates to: CTSKVTYAAAWL*PFLSLGIAEDQ
Trigger: TTGGTCTTCAGCTATACCCAGGCTCAGAAAGGGCAAGAGCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp GACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCAAATGCGAAAGCCACAGGAACACACTTTaGGAACCACTTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: DPTIGVSCVAEPHSKCESHRNTL*EPLPPR
Trigger: CCTTGGAGGAAGTGGTTCTCAAAGTGTGTTCCTGTG...GCTTTCGCATTTGGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp GGGGACAACAGAGAGAAACAGAGCACTATCTGGAGGGACAGGCACACCCGCAACAGCTACTTGGGCTCTTaGCTTTTCAGACATTGGAGG +
Preference number: 4 (lower is better)
Translates to: GDNREKQSTIWRDRHTRNSYLGS*LFRHWR
Trigger: CCTCCAATGTCTGAAAAGTCAAGAGCCCAAGTAGCT...GTTGCGGGTGTGCCTGTCCCTCCAGATAGTGCTCTGTTTCTCTCTGTTGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp AACCACTTCCTCCAAGGGAACATCCTTAAACAGCTTGTGGTATTGCTGGTTGTAGCTCGTAGGCCAGGCTaGGTGAGGCCTCTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: NHFLQGNILKQLVVLLVVARRPG*VRPLAP
Trigger: TGGGGCTAGAGGCCTCACTCAGCCTGGCCTACGAGC...TACAACCAGCAATACCACAAGCTGTTTAAGGATGTTCCCTTGGAGGAAGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS-3UTR GCA 90 bp AACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAGGCCAGAGAAGCTGTCTTTCTGTaGATTTGTTGGTTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: NLQSHYLSRWESQGDEAREAVFL*ICWLPP
Trigger: GGGCGGCAACCAACAAATGCACAGAAAGACAGCTTC...TCTGGCCTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp CACACAAGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAGGCCCTCACTCAGACTCTTCTTaGTGGAAGGCTGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HTRAKPSTRSVTTVIKGPHSDSS*WKAVGG
Trigger: CCCACCTACAGCCTTCCAGCAAGAAGAGTCTGAGTG...AGGGCCTTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCTTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp TTAATGGAGAATAGGCCCCATGGAGTGGAGGTCCCTCCTCCATGGCCTGCAACCAAGGAGCATAACTGCTaGTCTAGCCGAGAAATACGG +
Preference number: 4 (lower is better)
Translates to: LMENRPHGVEVPPPWPATKEHNC*SSREIR
Trigger: CCGTATTTCTCGGCTAGAGCAGCAGTTATGCTCCTT...GGTTGCAGGCCATGGAGGAGGGACCTCCACTCCATGGGGCCTATTCTCCATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp GTTCTGACCTCTGACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCAGTGTTCTGCCTGTGTaGCAGAACTGTTTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: VLTSDPTIGVSCVAEPHSSVLPV*QNCFQG
Trigger: TCCTTGGAAACAGTTCTGGCACACAGGCAGAACACT...GGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTCAGAGGTCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp AGGCAGGGAGTGGACAGCAAGACCTCAGATCCAAGCCTCCACCCTTCCCTTCCCACAAAGATATACTTCTaGCTGGTGTTGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: RQGVDSKTSDPSLHPSLPTKIYF*LVLVVM
Trigger: CATCACCACCAACACCAGCCAGAAGTATATCTTTGT...GGGAAGGGAAGGGTGGAGGCTTGGATCTGAGGTCTTGCTGTCCACTCCCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp AACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAGGCCAGAGGAAGAAACTGTCTGTaGAGTCCACGGATGATGGAG +
Preference number: 4 (lower is better)
Translates to: NLQSHYLSRWESQGDEARGRNCL*SPRMME
Trigger: CTCCATCATCCGTGGACTCCACAGACAGTTTCTTCC...TCTGGCCTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp AGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAGGCCCTGCTCCAACATTGGAGGCTTCCTaGAGGGGAAGAAACTGTCTG +
Preference number: 4 (lower is better)
Translates to: RAKPSTRSVTTVIKGPAPTLEAS*RGRNCL
Trigger: CAGACAGTTTCTTCCCCTCCAGGAAGCCTCCAATGT...TGGAGCAGGGCCTTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp AACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAGGCCAGACAGCATTCTTTGCAGTaGGAGAGCAGTTCGGCATCT +
Preference number: 4 (lower is better)
Translates to: NLQSHYLSRWESQGDEARQHSLQ*ESSSAS
Trigger: AGATGCCGAACTGCTCTCCCACTGCAAAGAATGCTG...TCTGGCCTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp CCTTCCAGAACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGTTCTTGGAGAAGGAATaGGGACAAAGGCCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: PSRTSKATILADGSPRAMFLEKE*GQRPSG
Trigger: GCCACTTGGCCTTTGTCCCCATTCCTTCTCCAAGAA...CATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTTCTGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp GACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCAAATGCGAAAGCCCAAATGCGAAAGCATaGCCTCTGTCCTTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: DPTIGVSCVAEPHSKCESPNAKA*PLSFEV
Trigger: CACCTCAAAGGACAGAGGCCATGCTTTCGCATTTGG...GCTTTCGCATTTGGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp GTTTGTGTTCTGACCTCTGACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCAAAATTCATCTCTGGCTaGAATCCTGGCCATGAGCCC +
Preference number: 4 (lower is better)
Translates to: VCVLTSDPTIGVSCVAEPKFISG*NPGHEP
Trigger: GGGCTCATGGCCAGGATTCCAGCCAGAGATGAATTT...TGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTCAGAGGTCAGAACACAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp CCTTCCAGAACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAACTGGCACCTCTCATaGCCTCTGACAACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: PSRTSKATILADGSPRAMNWHLS*PLTTKQ
Trigger: TTGCTTGGTTGTCAGAGGCCATGAGAGGTGCCAGTT...CATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTTCTGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp CTTGATAGAGGAAGAGGAATATCCAAGGCAAAGCCACCACCACGTCCAACCTCCACCAGCAACTTTCCCTaGTACTTCTGGCCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LDRGRGISKAKPPPRPTSTSNFP*YFWPPH
Trigger: GTGAGGAGGCCAGAAGTATCAGGGAAAGTTGCTGGT...GGAGGTTGGACGTGGTGGTGGCTTTGCCTTGGATATTCCTCTTCCTCTATCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp TTAATGGAGAATAGGCCCCATGGAGTGGAGGTCCCTCCTCCATGGCCTGCAACCCCATTCATGGAACAGTaGGTTTCACCTGAGACATAC +
Preference number: 4 (lower is better)
Translates to: LMENRPHGVEVPPPWPATPFMEQ*VSPETY
Trigger: GTATGTCTCAGGTGAAACTCACTGTTCCATGAATGG...GGTTGCAGGCCATGGAGGAGGGACCTCCACTCCATGGGGCCTATTCTCCATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp GTTTGTGTTCTGACCTCTGACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCAATAGACAGCATTCTTTaGAGTGGGAGAGCAGTTCGG +
Preference number: 4 (lower is better)
Translates to: VCVLTSDPTIGVSCVAEPIDSIL*SGRAVR
Trigger: CCGAACTGCTCTCCCACTGCAAAGAATGCTGTCTAT...TGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTCAGAGGTCAGAACACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp TCAAAGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCAGGAGCATCAGCCAATaGAAGCAGGTCTATATAAAA +
Preference number: 4 (lower is better)
Translates to: SKPWAPSAPPKSPTLQHGRSISQ*KQVYIK
Trigger: TTTTATATAGACCTGCTTGCATTGGCTGATGCTCCT...GCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp GACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCAAATGCGAAAGCCTCCTCAACTCTGTCTaGTTTCTCTTTGCAGGACAC +
Preference number: 4 (lower is better)
Translates to: DPTIGVSCVAEPHSKCESLLNSV*FLFAGH
Trigger: GTGTCCTGCAAAGAGAAACCAGACAGAGTTGAGGAG...GCTTTCGCATTTGGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp CACACAAGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAGGCCCTCACAGGGATCATTGGTaGAGACTTAGCACCCAGAAC +
Preference number: 4 (lower is better)
Translates to: HTRAKPSTRSVTTVIKGPHRDHW*RLSTQN
Trigger: GTTCTGGGTGCTAAGTCTCCACCAATGATCCCTGTG...AGGGCCTTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCTTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp GGGGACAACAGAGAGAAACAGAGCACTATCTGGAGGGACAGGCACACCCGCAACGGAGGAGGAGGGATCTaGAATATTTTCCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: GDNREKQSTIWRDRHTRNGGGGI*NIFLHR
Trigger: CCTATGAAGGAAAATATTCCAGATCCCTCCTCCTCC...GTTGCGGGTGTGCCTGTCCCTCCAGATAGTGCTCTGTTTCTCTCTGTTGTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp AACCACTTCCTCCAAGGGAACATCCTTAAACAGCTTGTGGTATTGCTGGTTGTAACTGGGAGAGGGGGATaGCACTGTAGTCCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: NHFLQGNILKQLVVLLVVTGRGG*HCSPGA
Trigger: AGCCCCCGGACTACAGTGCCATCCCCCTCTCCCAGT...TACAACCAGCAATACCACAAGCTGTTTAAGGATGTTCCCTTGGAGGAAGTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS-3UTR TCA 90 bp GACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCAAATGCGAAAGCAGACTCAGGTTCCCCTaGAAATTCTCTTACACTCAG +
Preference number: 4 (lower is better)
Translates to: DPTIGVSCVAEPHSKCESRLRFP*KFSYTQ
Trigger: CTGAGTGTAAGAGAATTTTCAGGGGAACCTGAGTCT...GCTTTCGCATTTGGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp ATAGACCCCCTGGCCTGGTTCCTGCACTGTGCTAGGCCCACAGTGGACACTTCCTCTCTAAGTGTTTGCTaGAGCTTTGTGTACAGAATT +
Preference number: 4 (lower is better)
Translates to: IDPLAWFLHCARPTVDTSSLSVC*SFVYRI
Trigger: AATTCTGTACACAAAGCTTCAGCAAACACTTAGAGA...GGAAGTGTCCACTGTGGGCCTAGCACAGTGCAGGAACCAGGCCAGGGGGTCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp GACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCAAATGCGAAAGCACAGTGAGTTTCACCTaGGACATACAGATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: DPTIGVSCVAEPHSKCESTVSFT*DIQIWC
Trigger: GCACCAAATCTGTATGTCTCAGGTGAAACTCACTGT...GCTTTCGCATTTGGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp AACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAGGCCAGACAACCCAAGGGTGGTTaGATCAAACTCAGGGAATTA +
Preference number: 4 (lower is better)
Translates to: NLQSHYLSRWESQGDEARQPKGG*IKLREL
Trigger: TAATTCCCTGAGTTTGATTCAACCACCCTTGGGTTG...TCTGGCCTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp AGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAGGCCCTGCTCCACTCAAGGAGCATAACTaGTGCTCTAGCCGAGAAATA +
Preference number: 4 (lower is better)
Translates to: RAKPSTRSVTTVIKGPAPLKEHN*CSSREI
Trigger: TATTTCTCGGCTAGAGCAGCAGTTATGCTCCTTGAG...TGGAGCAGGGCCTTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp GTTCTGACCTCTGACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCCCTATTTCCAGGGCTTaGGACACCTTAGAAATGTTT +
Preference number: 4 (lower is better)
Translates to: VLTSDPTIGVSCVAEPHSPISRA*DTLEMF
Trigger: AAACATTTCTAAGGTGTCCCAAGCCCTGGAAATAGG...GGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTCAGAGGTCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp ACAACCCAAGGGTGGTTGAATCAAACTCAGGGAATTAGAGGAGCATCAGCCAATATAGACCCCCTGGCCTaGTTCCTGCACTGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: TTQGWLNQTQGIRGASANIDPLA*FLHCAR
Trigger: CCTAGCACAGTGCAGGAACCAGGCCAGGGGGTCTAT...ATTGGCTGATGCTCCTCTAATTCCCTGAGTTTGATTCAACCACCCTTGGGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp TTAATGGAGAATAGGCCCCATGGAGTGGAGGTCCCTCCTCCATGGCCTGCAACCTTTCATCCTAAAAACTaGGATGGGGAGAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: LMENRPHGVEVPPPWPATFHPKN*DGESMK
Trigger: CTTCATGCTCTCCCCATCCCAGTTTTTAGGATGAAA...GGTTGCAGGCCATGGAGGAGGGACCTCCACTCCATGGGGCCTATTCTCCATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp TTTGAGCACACAAGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAAGTGATCAAAGGCCCTaGTCCACTTGTCTCACCGGA +
Preference number: 4 (lower is better)
Translates to: FEHTRAKPSTRSVTTVIKSDQRP*STCLTG
Trigger: TCCGGTGAGACAAGTGGAGCAGGGCCTTTGATCACT...TTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCTTGTGTGCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp CCTTCCAGAACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGGACATACAGATTTGGTaGAAGCAACACAAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PSRTSKATILADGSPRAMDIQIW*KQHKRP
Trigger: TGGCCTTTTGTGTTGCTTGCACCAAATCTGTATGTC...CATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTTCTGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp TCAAAGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCAGCTTGTGGTATTGCTaGTTGTATTTATTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: SKPWAPSAPPKSPTLQHGSLWYC*LYLFSV
Trigger: AACACTGAATAAATACAACCAGCAATACCACAAGCT...GCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp ACAACCCAAGGGTGGTTGAATCAAACTCAGGGAATTAGAGGAGCATCAGCCAATCCCTGGCCCAGAGCATaGAAATTCATCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TTQGWLNQTQGIRGASANPWPRA*KFISGW
Trigger: CCAGCCAGAGATGAATTTCCATGCTCTGGGCCAGGG...ATTGGCTGATGCTCCTCTAATTCCCTGAGTTTGATTCAACCACCCTTGGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp CCTTCCAGAACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAAAACAACCCAAGGGTaGTTGAATCAAACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PSRTSKATILADGSPRAMKTTQG*LNQTQG
Trigger: TCCCTGAGTTTGATTCAACCACCCTTGGGTTGTTTT...CATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTTCTGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp CTTGATAGAGGAAGAGGAATATCCAAGGCAAAGCCACCACCACGTCCAACCTCCCACCTTAGAAATGTTTaGGCACACAAGGGCAAAACC +
Preference number: 4 (lower is better)
Translates to: LDRGRGISKAKPPPRPTSHLRNV*AHKGKT
Trigger: GGTTTTGCCCTTGTGTGCTCAAACATTTCTAAGGTG...GGAGGTTGGACGTGGTGGTGGCTTTGCCTTGGATATTCCTCTTCCTCTATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR TCA 90 bp ACAACCCAAGGGTGGTTGAATCAAACTCAGGGAATTAGAGGAGCATCAGCCAATGAGCCTGGGTATAGCTaGAGACCAAGTTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: TTQGWLNQTQGIRGASANEPGYS*RPSSPA
Trigger: TGCTGGTGAACTTGGTCTTCAGCTATACCCAGGCTC...ATTGGCTGATGCTCCTCTAATTCCCTGAGTTTGATTCAACCACCCTTGGGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp TGGTTGTATTTATTCAGTGTTATCCCTTCTCGGCCACACTTCTTTATCTCTTCACTGTGGCCTGAGCTCTaGTGCGGGGAGCTTGGCACA +
Preference number: 4 (lower is better)
Translates to: WLYLFSVIPSRPHFFISSLWPEL*CGELGT
Trigger: TGTGCCAAGCTCCCCGCAGCAGAGCTCAGGCCACAG...TGAAGAGATAAAGAAGTGTGGCCGAGAAGGGATAACACTGAATAAATACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS-3UTR CCA 90 bp TTTGAGCACACAAGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAAACCACAGGGATCATTaGTGGAGACTTAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: FEHTRAKPSTRSVTTVIKNHRDH*WRLSTQ
Trigger: CTGGGTGCTAAGTCTCCACCAATGATCCCTGTGGTT...TTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCTTGTGTGCTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp AACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAGGCCAGAGGACAGACAGTCGTCTaGTTCACAATAAATAATTTC +
Preference number: 4 (lower is better)
Translates to: NLQSHYLSRWESQGDEARGQTVV*FTINNF
Trigger: GAAATTATTTATTGTGAAGCAGACGACTGTCTGTCC...TCTGGCCTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp TGGTTGTATTTATTCAGTGTTATCCCTTCTCGGCCACACTTCTTTATCTCTTCACTGAGGCTACCACACTaGGAGAGGGGGATGGCACTG +
Preference number: 4 (lower is better)
Translates to: WLYLFSVIPSRPHFFISSLRLPH*ERGMAL
Trigger: CAGTGCCATCCCCCTCTCCCAGTGTGGTAGCCTCAG...TGAAGAGATAAAGAAGTGTGGCCGAGAAGGGATAACACTGAATAAATACAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS-3UTR GCA 90 bp CCTTCCAGAACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAACAGCTTGTGGTATTaGTGGTTGTATTTATTCAGT +
Preference number: 4 (lower is better)
Translates to: PSRTSKATILADGSPRAMNSLWY*WLYLFS
Trigger: ACTGAATAAATACAACCAGCAATACCACAAGCTGTT...CATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTTCTGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR GCA 90 bp TGGTTGTATTTATTCAGTGTTATCCCTTCTCGGCCACACTTCTTTATCTCTTCAGTTGCTCATCTCCAGTaGCAGGCAGCTCGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: WLYLFSVIPSRPHFFISSVAHLQ*QAARRP
Trigger: TGGCCTACGAGCTGCCTGGCACTGGAGATGAGCAAC...TGAAGAGATAAAGAAGTGTGGCCGAGAAGGGATAACACTGAATAAATACAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS-3UTR CCA 90 bp TGGTTGTATTTATTCAGTGTTATCCCTTCTCGGCCACACTTCTTTATCTCTTCACAGACTCACCTGACCTaGCTGAGGCTACCACACTGG +
Preference number: 4 (lower is better)
Translates to: WLYLFSVIPSRPHFFISSQTHLT*LRLPHW
Trigger: CCAGTGTGGTAGCCTCAGCCAGGTCAGGTGAGTCTG...TGAAGAGATAAAGAAGTGTGGCCGAGAAGGGATAACACTGAATAAATACAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS-3UTR TCA 90 bp CACTTCCTCCAAGGGAACATCCTTAAACAGCTTGTGGTATTGCTGGTTGTATTTCACAGGAACACACTTTaGGAACCACTTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: HFLQGNILKQLVVLLVVFHRNTL*EPLPPR
Trigger: CCTTGGAGGAAGTGGTTCTCAAAGTGTGTTCCTGTG...AAATACAACCAGCAATACCACAAGCTGTTTAAGGATGTTCCCTTGGAGGAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS-3UTR CCA 90 bp CACTTCCTCCAAGGGAACATCCTTAAACAGCTTGTGGTATTGCTGGTTGTATTTCTCCTCAACTCTGTCTaGTTTCTCTTTGCAGGACAC +
Preference number: 4 (lower is better)
Translates to: HFLQGNILKQLVVLLVVFLLNSV*FLFAGH
Trigger: GTGTCCTGCAAAGAGAAACCAGACAGAGTTGAGGAG...AAATACAACCAGCAATACCACAAGCTGTTTAAGGATGTTCCCTTGGAGGAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS-3UTR CCA 90 bp CTTGATAGAGGAAGAGGAATATCCAAGGCAAAGCCACCACCACGTCCAACCTCCTCCTTAAACAGCTTGTaGTATTGCTGGTTGTATTTA +
Preference number: 4 (lower is better)
Translates to: LDRGRGISKAKPPPRPTSSLNSL*YCWLYL
Trigger: TAAATACAACCAGCAATACCACAAGCTGTTTAAGGA...GGAGGTTGGACGTGGTGGTGGCTTTGCCTTGGATATTCCTCTTCCTCTATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp ACAACCCAAGGGTGGTTGAATCAAACTCAGGGAATTAGAGGAGCATCAGCCAATAAGGATGACCATTCATaGAACAGTGAGTTTCACCTG +
Preference number: 4 (lower is better)
Translates to: TTQGWLNQTQGIRGASANKDDHS*NSEFHL
Trigger: CAGGTGAAACTCACTGTTCCATGAATGGTCATCCTT...ATTGGCTGATGCTCCTCTAATTCCCTGAGTTTGATTCAACCACCCTTGGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp ACAACCCAAGGGTGGTTGAATCAAACTCAGGGAATTAGAGGAGCATCAGCCAATCCTCCAATTCTCATTTaGGTTTGTCATAAACAGGAC +
Preference number: 4 (lower is better)
Translates to: TTQGWLNQTQGIRGASANPPILI*VCHKQD
Trigger: GTCCTGTTTATGACAAACCCAAATGAGAATTGGAGG...ATTGGCTGATGCTCCTCTAATTCCCTGAGTTTGATTCAACCACCCTTGGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CCA 90 bp TGGTTGTATTTATTCAGTGTTATCCCTTCTCGGCCACACTTCTTTATCTCTTCATTTCTGTGCATTTGTTaGTTGCTCATCTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: WLYLFSVIPSRPHFFISSFLCIC*LLISSA
Trigger: GGCACTGGAGATGAGCAACCAACAAATGCACAGAAA...TGAAGAGATAAAGAAGTGTGGCCGAGAAGGGATAACACTGAATAAATACAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS-3UTR GCA 90 bp AACCACTTCCTCCAAGGGAACATCCTTAAACAGCTTGTGGTATTGCTGGTTGTAAACAGCTTGTGGTATTaGTGGTTGTATTTATTCAGT +
Preference number: 4 (lower is better)
Translates to: NHFLQGNILKQLVVLLVVNSLWY*WLYLFS
Trigger: ACTGAATAAATACAACCAGCAATACCACAAGCTGTT...TACAACCAGCAATACCACAAGCTGTTTAAGGATGTTCCCTTGGAGGAAGTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS-3UTR CCA 90 bp AACCACTTCCTCCAAGGGAACATCCTTAAACAGCTTGTGGTATTGCTGGTTGTATCCTTAAACAGCTTGTaGTATTGCTGGTTGTATTTA +
Preference number: 4 (lower is better)
Translates to: NHFLQGNILKQLVVLLVVSLNSL*YCWLYL
Trigger: TAAATACAACCAGCAATACCACAAGCTGTTTAAGGA...TACAACCAGCAATACCACAAGCTGTTTAAGGATGTTCCCTTGGAGGAAGTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS-3UTR CCA 90 bp CACTTCCTCCAAGGGAACATCCTTAAACAGCTTGTGGTATTGCTGGTTGTATTTAGCTTGTGGTATTGCTaGTTGTATTTATTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: HFLQGNILKQLVVLLVVFSLWYC*LYLFSV
Trigger: AACACTGAATAAATACAACCAGCAATACCACAAGCT...AAATACAACCAGCAATACCACAAGCTGTTTAAGGATGTTCCCTTGGAGGAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS TCA 90 bp TTGTTGGTTGCTCATCTCCAGTGCCAGGCAGCTCGTAGGCCAGGCTaGGTGAGGCCTCTAGCCCCACCCTTGAGGAGGCACACTGAGAGG +
Preference number: 5 (lower is better)
Translates to: LLVAHLQCQAARRPG*VRPLAPPLRRHTER
Trigger: CCTCTCAGTGTGCCTCCTCAAGGGTGGGGCTAGAGGCCTCACTCAGCCTGGCCTACGAGCTGCCTGGCACTGGAGATGAGCAACCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562288.1
ENST00000570275.5
CDS-3UTR CAA 90 bp GGGGACAACAGAGAGAAACAGAGCACTATCTGGAGGGACAGGCACACCCGCAACCTCAACGGGCTGCTGTaGGCCATGCCTGAGATGCGG +
Preference number: 5 (lower is better)
Translates to: GDNREKQSTIWRDRHTRNLNGLL*AMPEMR
Trigger: CCGCATCTCAGGCATGGCCAACAGCAGCCCGTTGAG...GTTGCGGGTGTGCCTGTCCCTCCAGATAGTGCTCTGTTTCTCTCTGTTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS CCA 90 bp CATACAGCCAGCACCCAGTGTTTGCTCAAGGCACTCAGCCCAGGGTaGCTGACTGATCAAAGAGGAACTCAGGTGGGAGGTAGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: HTASTQCLLKALSPG*LTDQRGTQVGGRRP
Trigger: GGGCCTCCTACCTCCCACCTGAGTTCCTCTTTGATCAGTCAGCCACCCTGGGCTGAGTGCCTTGAGCAAACACTGGGTGCTGGCTGTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563133.5
CDS TCA 90 bp CCCAGTCCTGCCCATGCATCCTCAGTGCCAATTCTGCCCTGGCCTTaGGCCAGAAGCTTGAGGCAGAGATCAGAGACTAGGACCCTTCTC +
Preference number: 5 (lower is better)
Translates to: PSPAHASSVPILPWP*ARSLRQRSETRTLL
Trigger: GAGAAGGGTCCTAGTCTCTGATCTCTGCCTCAAGCTTCTGGCTCAAGGCCAGGGCAGAATTGGCACTGAGGATGCATGGGCAGGACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567637.5
CDS-3UTR CAA 90 bp CCTTCCAGAACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGGTGATGGCCAGTCCATaGGGAAGGAGCCGTGCCATC +
Preference number: 5 (lower is better)
Translates to: PSRTSKATILADGSPRAMVMASP*GRSRAI
Trigger: GATGGCACGGCTCCTTCCCAATGGACTGGCCATCAC...CATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTTCTGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CAA 90 bp AGGCAGGGAGTGGACAGCAAGACCTCAGATCCAAGCCTCCACCCTTCCCTTCCCACACTCAGACTCTTCTaGCTGGAAGGCTGTAGGTGG +
Preference number: 5 (lower is better)
Translates to: RQGVDSKTSDPSLHPSLPTLRLF*LEGCRW
Trigger: CCACCTACAGCCTTCCAGCAAGAAGAGTCTGAGTGT...GGGAAGGGAAGGGTGGAGGCTTGGATCTGAGGTCTTGCTGTCCACTCCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CAA 90 bp CCTTCCAGAACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGGCTGCAGCATGGCTCTaGCCCTTTCTGAGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: PSRTSKATILADGSPRAMAAAWL*PFLSLG
Trigger: ACCCAGGCTCAGAAAGGGCAAGAGCCATGCTGCAGC...CATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTTCTGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS CCA 90 bp GCCATGGACAAGCCCTCCCGAACTTACCAGACATTGGAGGCTTCCTaGAGGGGAAGAAACTGTCTGTGGAGTCCACGGATGATGGAGGGA +
Preference number: 5 (lower is better)
Translates to: AMDKPSRTYQTLEAS*RGRNCLWSPRMMEG
Trigger: TCCCTCCATCATCCGTGGACTCCACAGACAGTTTCTTCCCCTCCAGGAAGCCTCCAATGTCTGGTAAGTTCGGGAGGGCTTGTCCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567662.5
CDS-3UTR CAA 90 bp TCAAAGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCCATAGACAGCATTCTTaGCAGTGGGAGAGCAGTTCG +
Preference number: 5 (lower is better)
Translates to: SKPWAPSAPPKSPTLQHGHRQHS*QWESSS
Trigger: CGAACTGCTCTCCCACTGCAAAGAATGCTGTCTATG...GCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS TCA 90 bp ATGCATCCTCAGTGCCAATTCTGCCCTGGCCTTGAGCCAGAAGCTTaGGGCAGAGATCAGAGACTAGGACCCTTCTCTAGGGGACACAGC +
Preference number: 5 (lower is better)
Translates to: MHPQCQFCPGLEPEA*GRDQRLGPFSRGHS
Trigger: GCTGTGTCCCCTAGAGAAGGGTCCTAGTCTCTGATCTCTGCCTCAAGCTTCTGGCTCAAGGCCAGGGCAGAATTGGCACTGAGGATGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567637.5
CDS GCA 90 bp ACTGCAAAGGAGACATTCCATTTCGGGAACAAGGAACCCCAGTCCTaGCCATGCATCCTCAGTGCCAATTCTGCCCTGGCCTTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: TAKETFHFGNKEPQS*PCILSANSALALSQ
Trigger: CTGGCTCAAGGCCAGGGCAGAATTGGCACTGAGGATGCATGGGCAGGACTGGGGTTCCTTGTTCCCGAAATGGAATGTCTCCTTTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567637.5
CDS CCA 90 bp GGAGAGGGGGATGGCACTGTAGTCCGGGGGCTCCTCAACTCTGTCTaGTTTCTCTTTGCAGGACACAGGACTGTTCAGAGAAGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: GEGDGTVVRGLLNSV*FLFAGHRTVQRSCL
Trigger: AAGACAGCTTCTCTGAACAGTCCTGTGTCCTGCAAAGAGAAACCAGACAGAGTTGAGGAGCCCCCGGACTACAGTGCCATCCCCCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562288.1
ENST00000563133.5
CDS-3UTR CAA 90 bp AACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAGGCCAGACTTTCTGTGCATTTGTaGGTTGCCGCCCTCCTCGGT +
Preference number: 5 (lower is better)
Translates to: NLQSHYLSRWESQGDEARLSVHL*VAALLG
Trigger: ACCGAGGAGGGCGGCAACCAACAAATGCACAGAAAG...TCTGGCCTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CAA 90 bp GTTCTGACCTCTGACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCTGTCTTTCTGTGCATTaGTTGGTTGCCGCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: VLTSDPTIGVSCVAEPHSCLSVH*LVAALL
Trigger: GAGGAGGGCGGCAACCAACAAATGCACAGAAAGACA...GGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTCAGAGGTCAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CAA 90 bp CCTTCCAGAACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGTACTTCTGGCTGGTGTaGGTGGTGATGGCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: PSRTSKATILADGSPRAMYFWLV*VVMASP
Trigger: TGGACTGGCCATCACCACCAACACCAGCCAGAAGTA...CATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTTCTGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CAA 90 bp CTTGATAGAGGAAGAGGAATATCCAAGGCAAAGCCACCACCACGTCCAACCTCCCATGGCCTCTGTCCTTaGAGGTGGCCTCCAGTGTTC +
Preference number: 5 (lower is better)
Translates to: LDRGRGISKAKPPPRPTSHGLCP*RWPPVF
Trigger: GAACACTGGAGGCCACCTCAAAGGACAGAGGCCATG...GGAGGTTGGACGTGGTGGTGGCTTTGCCTTGGATATTCCTCTTCCTCTATCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CAA 90 bp TCAAAGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCAAGTTCACCAGCATCTaGGCACATCCACCTATAACT +
Preference number: 5 (lower is better)
Translates to: SKPWAPSAPPKSPTLQHGKFTSI*AHPPIT
Trigger: AGTTATAGGTGGATGTGCCAAGATGCTGGTGAACTT...GCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CAA 90 bp TCAAAGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCACAACCCAAGGGTGGTaGAATCAAACTCAGGGAATT +
Preference number: 5 (lower is better)
Translates to: SKPWAPSAPPKSPTLQHGTTQGW*NQTQGI
Trigger: AATTCCCTGAGTTTGATTCAACCACCCTTGGGTTGT...GCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS CCA 90 bp TTCTGGCCAGTGCAGACTGTAGTCCGGGGGCTCCTCAACTCTGTCTaGTTTCTCTTTGCAGGACACAGGACTGTTCAGAGAAGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: FWPVQTVVRGLLNSV*FLFAGHRTVQRSCL
Trigger: AAGACAGCTTCTCTGAACAGTCCTGTGTCCTGCAAAGAGAAACCAGACAGAGTTGAGGAGCCCCCGGACTACAGTCTGCACTGGCCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309731.12
ENST00000564129.5
ENST00000568594.5
ENST00000570275.5
CDS CCA 90 bp CAGCTCATCCTCCTCATAGACAGCATTCAGACATTGGAGGCTTCCTaGAGGGGAAGAAACTGTCTGTGGAGTCCACGGATGATGGAGGGA +
Preference number: 5 (lower is better)
Translates to: QLILLIDSIQTLEAS*RGRNCLWSPRMMEG
Trigger: TCCCTCCATCATCCGTGGACTCCACAGACAGTTTCTTCCCCTCCAGGAAGCCTCCAATGTCTGAATGCTGTCTATGAGGAGGATGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564773.1
CDS-3UTR CAA 90 bp AACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAGGCCAGAGCACAGGAACACACTTaGAGAACCACTTCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: NLQSHYLSRWESQGDEARAQEHT*RTTSSK
Trigger: CTTGGAGGAAGTGGTTCTCAAAGTGTGTTCCTGTGC...TCTGGCCTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CAA 90 bp GTTCTGACCTCTGACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCACAGGAATGACCACCTaGATATCCTTGCCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: VLTSDPTIGVSCVAEPHSTGMTT*ISLPKR
Trigger: CCTCTTTGGCAAGGATATCAAGGTGGTCATTCCTGT...GGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTCAGAGGTCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CAA 90 bp AGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCTCTTGTGTTTGCTGAAGCTTaGTGTACAGAATTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: SPGPQVHLQSHLRCSMALVFAEA*CTEFLS
Trigger: ACTGAGGAATTCTGTACACAAAGCTTCAGCAAACAC...AAGAGCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS GCA 90 bp GGACTTCCTGCAGTAAGACAGGAGAAGCTATCTTACCATGGCCCTTaGGATCTCACTTGCCCTAAGGAGCCCACACCAGGTTTATCAGAG +
Preference number: 5 (lower is better)
Translates to: GLPAVRQEKLSYHGP*DLTCPKEPTPGLSE
Trigger: CTCTGATAAACCTGGTGTGGGCTCCTTAGGGCAAGTGAGATCGCAAGGGCCATGGTAAGATAGCTTCTCCTGTCTTACTGCAGGAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564773.1
ENST00000567029.5
CDS CCA 90 bp AGCATTCAGACATTGGAGGCTTCCTGGAGGGGAAGAAACTGTCTGTaGAGTCCACGGATGATGGAGGGATACAAGGGATGTTGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: SIQTLEASWRGRNCL*SPRMMEGYKGCCLG
Trigger: TCCCAGACAACATCCCTTGTATCCCTCCATCATCCGTGGACTCCACAGACAGTTTCTTCCCCTCCAGGAAGCCTCCAATGTCTGAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564773.1
CDS CCA 90 bp ACTTACCAGACATTGGAGGCTTCCTGGAGGGGAAGAAACTGTCTGTaGAGTCCACGGATGATGGAGGGATACAAGGGATGTTGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: TYQTLEASWRGRNCL*SPRMMEGYKGCCLG
Trigger: TCCCAGACAACATCCCTTGTATCCCTCCATCATCCGTGGACTCCACAGACAGTTTCTTCCCCTCCAGGAAGCCTCCAATGTCTGGTAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567662.5
CDS-3UTR CAA 90 bp AGCCCTGGGCCCCAAGTGCACCTCCAAAGTCACCTACGCTGCAGCATGGCTCTTGTTTTCTCTAAGTGTTaGCTGAAGCTTTGTGTACAG +
Preference number: 5 (lower is better)
Translates to: SPGPQVHLQSHLRCSMALVFSKC*LKLCVQ
Trigger: CTGTACACAAAGCTTCAGCAAACACTTAGAGAAAAC...AAGAGCCATGCTGCAGCGTAGGTGACTTTGGAGGTGCACTTGGGGCCCAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CAA 90 bp GACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCACATTCCAAATGCGAAAGCCCCTATTTCCAGGGCTaGGGACACCTTAGAAATGTT +
Preference number: 5 (lower is better)
Translates to: DPTIGVSCVAEPHSKCESPYFQG*GHLRNV
Trigger: AACATTTCTAAGGTGTCCCAAGCCCTGGAAATAGGG...GCTTTCGCATTTGGAATGTGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS GCA 90 bp GCAGACTGTAGTCCGGGGGCTCCTCAACTCTGTCTGGTTTCTCTTTaGAGGACACAGGACTGTTCAGAGAAGCTGTCTTTCTGTGCATTT +
Preference number: 5 (lower is better)
Translates to: ADCSPGAPQLCLVSL*RTQDCSEKLSFCAF
Trigger: AAATGCACAGAAAGACAGCTTCTCTGAACAGTCCTGTGTCCTGCAAAGAGAAACCAGACAGAGTTGAGGAGCCCCCGGACTACAGTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309731.12
ENST00000564129.5
ENST00000568594.5
ENST00000570275.5
CDS GCA 90 bp TGGCACTGTAGTCCGGGGGCTCCTCAACTCTGTCTGGTTTCTCTTTaGAGGACACAGGACTGTTCAGAGAAGCTGTCTTTCTGTGCATTT +
Preference number: 5 (lower is better)
Translates to: WHCSPGAPQLCLVSL*RTQDCSEKLSFCAF
Trigger: AAATGCACAGAAAGACAGCTTCTCTGAACAGTCCTGTGTCCTGCAAAGAGAAACCAGACAGAGTTGAGGAGCCCCCGGACTACAGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562288.1
ENST00000563133.5
CDS CCA 90 bp ACTTTTCAGACATTGGAGGCTTCCTGGAGGGGAAGAAACTGTCTGTaGAGTCCACGGATGATGGAGGGATACAAGGGATGTTGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: TFQTLEASWRGRNCL*SPRMMEGYKGCCLG
Trigger: TCCCAGACAACATCCCTTGTATCCCTCCATCATCCGTGGACTCCACAGACAGTTTCTTCCCCTCCAGGAAGCCTCCAATGTCTGAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309731.12
ENST00000564184.1
ENST00000565233.5
ENST00000567029.5
CDS CCA 90 bp CCCTTCTCGGCCACACTTCTTTATCTCTTCACCCTTCAAGCCTTCTaGCCAGTGCAGACTGCAAAGGAGACATTCCATTTCGGGAACAAG +
Preference number: 5 (lower is better)
Translates to: PFSATLLYLFTLQAF*PVQTAKETFHFGNK
Trigger: CTTGTTCCCGAAATGGAATGTCTCCTTTGCAGTCTGCACTGGCCAGAAGGCTTGAAGGGTGAAGAGATAAAGAAGTGTGGCCGAGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567637.5
CDS-3UTR CAA 90 bp TTAATGGAGAATAGGCCCCATGGAGTGGAGGTCCCTCCTCCATGGCCTGCAACCCTGAGACATACAGATTaGGTGCAAGCAACACAAAAG +
Preference number: 5 (lower is better)
Translates to: LMENRPHGVEVPPPWPATLRHTD*VQATQK
Trigger: CTTTTGTGTTGCTTGCACCAAATCTGTATGTCTCAG...GGTTGCAGGCCATGGAGGAGGGACCTCCACTCCATGGGGCCTATTCTCCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CAA 90 bp GTTTGTGTTCTGACCTCTGACCCCACCATAGGAGTGAGCTGTGTGGCAGAGCCAGCCATCTTGTGTTTTTaGATCATTTGCACAGACACC +
Preference number: 5 (lower is better)
Translates to: VCVLTSDPTIGVSCVAEPAILCF*IICTDT
Trigger: GGTGTCTGTGCAAATGATCAAAAAACACAAGATGGC...TGGCTCTGCCACACAGCTCACTCCTATGGTGGGGTCAGAGGTCAGAACACAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CAA 90 bp ATTTATTCAGTGTTATCCCTTCTCGGCCACACTTCTTTATCTCTTCACCCTTCACCTCTAGCCCCACCCTaGAGGAGGCACACTGAGAGG +
Preference number: 5 (lower is better)
Translates to: IYSVLSLLGHTSLSLHPSPLAPP*RRHTER
Trigger: CCTCTCAGTGTGCCTCCTCAAGGGTGGGGCTAGAGG...TGAAGGGTGAAGAGATAAAGAAGTGTGGCCGAGAAGGGATAACACTGAATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS GCA 90 bp GTAAGACAGGAGAAGCTATCTTACCATGGCCCTTGCGATCTCACTTaGCCTAAGGAGCCCACACCAGGTTTATCAGAGTTTTCTCCAGAT +
Preference number: 5 (lower is better)
Translates to: VRQEKLSYHGPCDLT*PKEPTPGLSEFSPD
Trigger: ATCTGGAGAAAACTCTGATAAACCTGGTGTGGGCTCCTTAGGGCAAGTGAGATCGCAAGGGCCATGGTAAGATAGCTTCTCCTGTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564773.1
ENST00000567029.5
CDS CCA 90 bp CAGGACACAGGACTGTTCAGAGAAGCTGTCTTTCTGTGCATTTGTTaGTTGCTAGGGAAAAACAGGCCCATATCAGGAAGGGGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: QDTGLFREAVFLCIC*LLGKNRPISGRGLH
Trigger: ATGAAGCCCCCTTCCTGATATGGGCCTGTTTTTCCCTAGCAACCAACAAATGCACAGAAAGACAGCTTCTCTGAACAGTCCTGTGTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568594.5
CDS-3UTR CAA 90 bp AACCTCCAAAGCCACTATCTTAGCAGATGGGAGTCCCAGGGCGATGAGGCCAGAACATCCTTAAACAGCTaGTGGTATTGCTGGTTGTAT +
Preference number: 5 (lower is better)
Translates to: NLQSHYLSRWESQGDEARTSLNS*WYCWLY
Trigger: ATACAACCAGCAATACCACAAGCTGTTTAAGGATGT...TCTGGCCTCATCGCCCTGGGACTCCCATCTGCTAAGATAGTGGCTTTGGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CAA 90 bp TGGTTGTATTTATTCAGTGTTATCCCTTCTCGGCCACACTTCTTTATCTCTTCATCTGCTGCGGGGAGCTaGGCACAGACTCACCTGACC +
Preference number: 5 (lower is better)
Translates to: WLYLFSVIPSRPHFFISSSAAGS*AQTHLT
Trigger: GGTCAGGTGAGTCTGTGCCAAGCTCCCCGCAGCAGA...TGAAGAGATAAAGAAGTGTGGCCGAGAAGGGATAACACTGAATAAATACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS GCA 90 bp ACACAGGACTGTTCAGAGAAGCTGTCTTTCTGTGCATTTGTTGGTTaGACACCAGAGTGTGCTTGTCTGTTTACACATCTGTGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: TQDCSEKLSFCAFVG*TPECACLFTHLCPP
Trigger: TGGGGGACACAGATGTGTAAACAGACAAGCACACTCTGGTGTGCAACCAACAAATGCACAGAAAGACAGCTTCTCTGAACAGTCCTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563133.5
CDS CCA 90 bp CAGGACACAGGACTGTTCAGAGAAGCTGTCTTTCTGTGCATTTGTTaGTTGCACACCAGAGTGTGCTTGTCTGTTTACACATCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: QDTGLFREAVFLCIC*LHTRVCLSVYTSVS
Trigger: GGACACAGATGTGTAAACAGACAAGCACACTCTGGTGTGCAACCAACAAATGCACAGAAAGACAGCTTCTCTGAACAGTCCTGTGTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563133.5
CDS-3UTR CAA 90 bp ACAACCCAAGGGTGGTTGAATCAAACTCAGGGAATTAGAGGAGCATCAGCCAATTTGACTTTTCAGACATaGGAGGCTTCCTGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: TTQGWLNQTQGIRGASANLTFQT*EASWRG
Trigger: TCCCCTCCAGGAAGCCTCCAATGTCTGAAAAGTCAA...ATTGGCTGATGCTCCTCTAATTCCCTGAGTTTGATTCAACCACCCTTGGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS GCA 90 bp TTCTCTTTGCAGGACACAGGACTGTTCAGAGAAGCTGTCTTTCTGTaGATTTGTTGGTTGCTAGGGAAAAACAGGCCCATATCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: FSLQDTGLFREAVFL*ICWLLGKNRPISGR
Trigger: CCTTCCTGATATGGGCCTGTTTTTCCCTAGCAACCAACAAATGCACAGAAAGACAGCTTCTCTGAACAGTCCTGTGTCCTGCAAAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568594.5
CDS-3UTR CAA 90 bp AACCACTTCCTCCAAGGGAACATCCTTAAACAGCTTGTGGTATTGCTGGTTGTAGCACAGGAACACACTTaGAGAACCACTTCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: NHFLQGNILKQLVVLLVVAQEHT*RTTSSK
Trigger: CTTGGAGGAAGTGGTTCTCAAAGTGTGTTCCTGTGC...TACAACCAGCAATACCACAAGCTGTTTAAGGATGTTCCCTTGGAGGAAGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS-3UTR CAA 90 bp TTTGAGCACACAAGGGCAAAACCCAGTACCAGGTCTGTGACCACAGTGATCAAAAAGCTACTTGGGCTCTaGACTTTTCAGACATTGGAG +
Preference number: 5 (lower is better)
Translates to: FEHTRAKPSTRSVTTVIKKLLGL*TFQTLE
Trigger: CTCCAATGTCTGAAAAGTCAAGAGCCCAAGTAGCTT...TTTGATCACTGTGGTCACAGACCTGGTACTGGGTTTTGCCCTTGTGTGCTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS GCA 90 bp TTCTCTTTGCAGGACACAGGACTGTTCAGAGAAGCTGTCTTTCTGTaGATTTGTTGGTTGCACACCAGAGTGTGCTTGTCTGTTTACACA +
Preference number: 5 (lower is better)
Translates to: FSLQDTGLFREAVFL*ICWLHTRVCLSVYT
Trigger: TGTGTAAACAGACAAGCACACTCTGGTGTGCAACCAACAAATGCACAGAAAGACAGCTTCTCTGAACAGTCCTGTGTCCTGCAAAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563133.5
CDS-3UTR CAA 90 bp CACTTCCTCCAAGGGAACATCCTTAAACAGCTTGTGGTATTGCTGGTTGTATTTTGTCTTTCTGTGCATTaGTTGGTTGCTCATCTCCAG +
Preference number: 5 (lower is better)
Translates to: HFLQGNILKQLVVLLVVFCLSVH*LVAHLQ
Trigger: CTGGAGATGAGCAACCAACAAATGCACAGAAAGACA...AAATACAACCAGCAATACCACAAGCTGTTTAAGGATGTTCCCTTGGAGGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS-3UTR CAA 90 bp ACAACCCAAGGGTGGTTGAATCAAACTCAGGGAATTAGAGGAGCATCAGCCAATAAACAGCTTGTGGTATaGCTGGTTGTATTTATTCAG +
Preference number: 5 (lower is better)
Translates to: TTQGWLNQTQGIRGASANKQLVV*LVVFIQ
Trigger: CTGAATAAATACAACCAGCAATACCACAAGCTGTTT...ATTGGCTGATGCTCCTCTAATTCCCTGAGTTTGATTCAACCACCCTTGGGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS-3UTR CAA 90 bp TGGTTGTATTTATTCAGTGTTATCCCTTCTCGGCCACACTTCTTTATCTCTTCACTTTCTGTGCATTTGTaGGTTGCTCATCTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: WLYLFSVIPSRPHFFISSLSVHL*VAHLQC
Trigger: GCACTGGAGATGAGCAACCAACAAATGCACAGAAAG...TGAAGAGATAAAGAAGTGTGGCCGAGAAGGGATAACACTGAATAAATACAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS-3UTR CAA 90 bp TGGTTGTATTTATTCAGTGTTATCCCTTCTCGGCCACACTTCTTTATCTCTTCAAAACAGCTTGTGGTATaGCTGGTTGTATTTATTCAG +
Preference number: 5 (lower is better)
Translates to: WLYLFSVIPSRPHFFISSKQLVV*LVVFIQ
Trigger: CTGAATAAATACAACCAGCAATACCACAAGCTGTTT...TGAAGAGATAAAGAAGTGTGGCCGAGAAGGGATAACACTGAATAAATACAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562288.1
CDS CAA 90 bp TCCCTGCCGCCTCCTTCCTGTGGCCTGAGCTCTGCTGCGGGGAGCTaGGCACAGACTCACCTGACCTGGCTGAGGCTACCACACTGGGAG +
Preference number: 6 (lower is better)
Translates to: SLPPPSCGLSSAAGS*AQTHLTWLRLPHWE
Trigger: CTCCCAGTGTGGTAGCCTCAGCCAGGTCAGGTGAGTCTGTGCCAAGCTCCCCGCAGCAGAGCTCAGGCCACAGGAAGGAGGCGGCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562288.1
ENST00000563133.5
CDS TCA 72 bp GCTCATCTCCAGTGCCAGGCAGCTCGTAGGCCAGGCTaGGTGAGGCCTCTAGCCCCACCCTTGAGGAGGCAC +
Preference number: 6 (lower is better)
Translates to: AHLQCQAARRPG*VRPLAPPLRRH
Trigger: GTGCCTCCTCAAGGGTGGGGCTAGAGGCCTCACTCAGCCTGGCCTACGAGCTGCCTGGCACTGGAGATGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562288.1
ENST00000570275.5
CDS CCA 72 bp TCTGCTGCGGGGAGCTTGGCACAGACTCACCTGACCTaGCTGAGGCTACCACACTGGGAGAGGGGGATGGCA +
Preference number: 6 (lower is better)
Translates to: SAAGSLAQTHLT*LRLPHWERGMA
Trigger: TGCCATCCCCCTCTCCCAGTGTGGTAGCCTCAGCCAGGTCAGGTGAGTCTGTGCCAAGCTCCCCGCAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562288.1
ENST00000563133.5
CDS CAA 72 bp CCTCCTTCCTGTGGCCTGAGCTCTGCTGCGGGGAGCTaGGCACAGACTCACCTGACCTGGCTGAGGCTACCA +
Preference number: 6 (lower is better)
Translates to: PPSCGLSSAAGS*AQTHLTWLRLP
Trigger: TGGTAGCCTCAGCCAGGTCAGGTGAGTCTGTGCCAAGCTCCCCGCAGCAGAGCTCAGGCCACAGGAAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562288.1
ENST00000563133.5
CDS CCA 72 bp TCTTTCTGTGCATTTGTTGGTTGCCGCCCTCCTCGGTaGCCTCGCTCCGGCTTAAAGCGGTCATCCCGGCGC +
Preference number: 6 (lower is better)
Translates to: SFCAFVGCRPPR*PRSGLKRSSRR
Trigger: GCGCCGGGATGACCGCTTTAAGCCGGAGCGAGGCCACCGAGGAGGGCGGCAACCAACAAATGCACAGAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309731.12
CDS CCA 72 bp AGCACCCAGTGTTTGCTCAAGGCACTCAGCCCAGGGTaGCTGACTGATCAAAGAGGAACTCAGGTGGGAGGT +
Preference number: 6 (lower is better)
Translates to: STQCLLKALSPG*LTDQRGTQVGG
Trigger: ACCTCCCACCTGAGTTCCTCTTTGATCAGTCAGCCACCCTGGGCTGAGTGCCTTGAGCAAACACTGGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563133.5
CDS TCA 72 bp CAGTGCCAATTCTGCCCTGGCCTTGAGCCAGAAGCTTaGGGCAGAGATCAGAGACTAGGACCCTTCTCTAGG +
Preference number: 6 (lower is better)
Translates to: QCQFCPGLEPEA*GRDQRLGPFSR
Trigger: CCTAGAGAAGGGTCCTAGTCTCTGATCTCTGCCTCAAGCTTCTGGCTCAAGGCCAGGGCAGAATTGGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567637.5
CDS CCA 72 bp AAGCCCTCCCGAACTTACCAGACATTGGAGGCTTCCTaGAGGGGAAGAAACTGTCTGTGGAGTCCACGGATG +
Preference number: 6 (lower is better)
Translates to: KPSRTYQTLEAS*RGRNCLWSPRM
Trigger: CATCCGTGGACTCCACAGACAGTTTCTTCCCCTCCAGGAAGCCTCCAATGTCTGGTAAGTTCGGGAGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567662.5
CDS CAA 72 bp GTTGCCATGGACAAGCCCTCCCGAACTTACCAGACATaGGAGGCTTCCTGGAGGGGAAGAAACTGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: VAMDKPSRTYQT*EASWRGRNCLW
Trigger: CCACAGACAGTTTCTTCCCCTCCAGGAAGCCTCCAATGTCTGGTAAGTTCGGGAGGGCTTGTCCATGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567662.5
CDS CAA 90 bp TTGCAAGTAGTTGCCATGGACAAGCCCTCCCGAACTTACCAGACATaGGAGGCTTCCTGGAGGGGAAGAAACTGTCTGTGGAGTCCACGG +
Preference number: 6 (lower is better)
Translates to: LQVVAMDKPSRTYQT*EASWRGRNCLWSPR
Trigger: CCGTGGACTCCACAGACAGTTTCTTCCCCTCCAGGAAGCCTCCAATGTCTGGTAAGTTCGGGAGGGCTTGTCCATGGCAACTACTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567662.5
CDS TCA 72 bp CCTGGAGGGGAAGAAACTGTCTGTGGAGTCCACGGATaGTGGAGGGATACAAGGGATGTTGTCTGGGAGAGA +
Preference number: 6 (lower is better)
Translates to: PGGEETVCGVHG*WRDTRDVVWER
Trigger: TCTCTCCCAGACAACATCCCTTGTATCCCTCCATCATCCGTGGACTCCACAGACAGTTTCTTCCCCTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309731.12
ENST00000564184.1
ENST00000564773.1
ENST00000565233.5
ENST00000567029.5
ENST00000567662.5
CDS GCA 72 bp GCAGTAAGACAGGAGAAGCTATCTTACCATGGCCCTTaGGATCTCACTTGCCCTAAGGAGCCCACACCAGGT +
Preference number: 6 (lower is better)
Translates to: AVRQEKLSYHGP*DLTCPKEPTPG
Trigger: ACCTGGTGTGGGCTCCTTAGGGCAAGTGAGATCGCAAGGGCCATGGTAAGATAGCTTCTCCTGTCTTACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564773.1
ENST00000567029.5
ENST00000567662.5
CDS CCA 72 bp TTGCCATGGACAAGCCCTCCCGAACTTACCAGACATTaGAGGCTTCCTGGAGGGGAAGAAACTGTCTGTGGA +
Preference number: 6 (lower is better)
Translates to: LPWTSPPELTRH*RLPGGEETVCG
Trigger: TCCACAGACAGTTTCTTCCCCTCCAGGAAGCCTCCAATGTCTGGTAAGTTCGGGAGGGCTTGTCCATGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567662.5
CDS GCA 72 bp AGTCCGGGGGCTCCTCAACTCTGTCTGGTTTCTCTTTaGAGGACACAGGACTGTTCAGAGAAGCTGTCTTTC +
Preference number: 6 (lower is better)
Translates to: SPGAPQLCLVSL*RTQDCSEKLSF
Trigger: GAAAGACAGCTTCTCTGAACAGTCCTGTGTCCTGCAAAGAGAAACCAGACAGAGTTGAGGAGCCCCCGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309731.12
ENST00000562288.1
ENST00000563133.5
ENST00000564129.5
ENST00000568594.5
ENST00000570275.5
CDS CCA 72 bp CTTGGGCTCTTGACTTTTCAGACATTGGAGGCTTCCTaGAGGGGAAGAAACTGTCTGTGGAGTCCACGGATG +
Preference number: 6 (lower is better)
Translates to: LGLLTFQTLEAS*RGRNCLWSPRM
Trigger: CATCCGTGGACTCCACAGACAGTTTCTTCCCCTCCAGGAAGCCTCCAATGTCTGAAAAGTCAAGAGCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309731.12
ENST00000564184.1
ENST00000565233.5
ENST00000567029.5
CDS CCA 72 bp CTCCTCATAGACAGCATTCAGACATTGGAGGCTTCCTaGAGGGGAAGAAACTGTCTGTGGAGTCCACGGATG +
Preference number: 6 (lower is better)
Translates to: LLIDSIQTLEAS*RGRNCLWSPRM
Trigger: CATCCGTGGACTCCACAGACAGTTTCTTCCCCTCCAGGAAGCCTCCAATGTCTGAATGCTGTCTATGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564773.1
CDS CAA 90 bp ACCACAGGGATCATTGGTGGAGACTTAGCACCCAGAACATTCTTCTaGGAGAAGGAATGGGGACAAAGGCCAAGTGGCTGTTACCTGTGC +
Preference number: 6 (lower is better)
Translates to: TTGIIGGDLAPRTFF*EKEWGQRPSGCYLC
Trigger: GCACAGGTAACAGCCACTTGGCCTTTGTCCCCATTCCTTCTCCAAGAAGAATGTTCTGGGTGCTAAGTCTCCACCAATGATCCCTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309731.12
ENST00000564773.1
ENST00000565233.5
ENST00000567662.5
CDS TCA 72 bp CCTCAGCAGGTCATATACACTGTCCCGGGAGAGCAGTaGCACAAAGATATACTTCTGGCTGGTGTTGGTGGT +
Preference number: 6 (lower is better)
Translates to: PQQVIYTVPGEQ*HKDILLAGVGG
Trigger: ACCACCAACACCAGCCAGAAGTATATCTTTGTGTCACTGCTCTCCCGGGACAGTGTATATGACCTGCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309731.12
ENST00000564129.5
ENST00000568594.5
CDS GCA 72 bp TCTCTTCACCCTTCAAGCCTTCTGGCCAGTGCAGACTaGAAAGGAGACATTCCATTTCGGGAACAAGGAACC +
Preference number: 6 (lower is better)
Translates to: SLHPSSLLASAD*KGDIPFREQGT
Trigger: GGTTCCTTGTTCCCGAAATGGAATGTCTCCTTTGCAGTCTGCACTGGCCAGAAGGCTTGAAGGGTGAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567637.5
CDS CAA 90 bp GCAGGACACAGGACTGTTCAGAGAAGCTGTCTTTCTGTGCATTTGTaGGTTGCTAGGGAAAAACAGGCCCATATCAGGAAGGGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: AGHRTVQRSCLSVHL*VAREKQAHIRKGAS
Trigger: TGAAGCCCCCTTCCTGATATGGGCCTGTTTTTCCCTAGCAACCAACAAATGCACAGAAAGACAGCTTCTCTGAACAGTCCTGTGTCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568594.5
CDS GCA 72 bp GAGAAGCTATCTTACCATGGCCCTTGCGATCTCACTTaGCCTAAGGAGCCCACACCAGGTTTATCAGAGTTT +
Preference number: 6 (lower is better)
Translates to: EKLSYHGPCDLT*PKEPTPGLSEF
Trigger: AAACTCTGATAAACCTGGTGTGGGCTCCTTAGGGCAAGTGAGATCGCAAGGGCCATGGTAAGATAGCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564773.1
ENST00000567029.5
CDS GCA 72 bp ACTGGGAAGACAGAAAGTCTGGCCTTTGCAAGTAGTTaGCATGGACAAGCCCTCCCGAACTTACCAGACATT +
Preference number: 6 (lower is better)
Translates to: TGKTESLAFASS*HGQALPNLPDI
Trigger: AATGTCTGGTAAGTTCGGGAGGGCTTGTCCATGGCAACTACTTGCAAAGGCCAGACTTTCTGTCTTCCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567662.5
CDS CAA 90 bp GACACAGGACTGTTCAGAGAAGCTGTCTTTCTGTGCATTTGTTGGTaGCACACCAGAGTGTGCTTGTCTGTTTACACATCTGTGTCCCCC +
Preference number: 6 (lower is better)
Translates to: DTGLFREAVFLCICW*HTRVCLSVYTSVSP
Trigger: GGGGGACACAGATGTGTAAACAGACAAGCACACTCTGGTGTGCAACCAACAAATGCACAGAAAGACAGCTTCTCTGAACAGTCCTGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563133.5
CDS CAA 90 bp GACACAGGACTGTTCAGAGAAGCTGTCTTTCTGTGCATTTGTTGGTaGCTAGGGAAAAACAGGCCCATATCAGGAAGGGGGCTTCATGAG +
Preference number: 6 (lower is better)
Translates to: DTGLFREAVFLCICW*LGKNRPISGRGLHE
Trigger: CTCATGAAGCCCCCTTCCTGATATGGGCCTGTTTTTCCCTAGCAACCAACAAATGCACAGAAAGACAGCTTCTCTGAACAGTCCTGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568594.5
CDS CAA 90 bp TTTGCAGGACACAGGACTGTTCAGAGAAGCTGTCTTTCTGTGCATTaGTTGGTTGCTAGGGAAAAACAGGCCCATATCAGGAAGGGGGCT +
Preference number: 6 (lower is better)
Translates to: FAGHRTVQRSCLSVH*LVAREKQAHIRKGA
Trigger: AGCCCCCTTCCTGATATGGGCCTGTTTTTCCCTAGCAACCAACAAATGCACAGAAAGACAGCTTCTCTGAACAGTCCTGTGTCCTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568594.5
CDS CAA 72 bp CTGTTCAGAGAAGCTGTCTTTCTGTGCATTTGTTGGTaGCTAGGGAAAAACAGGCCCATATCAGGAAGGGGG +
Preference number: 6 (lower is better)
Translates to: LFREAVFLCICW*LGKNRPISGRG
Trigger: CCCCCTTCCTGATATGGGCCTGTTTTTCCCTAGCAACCAACAAATGCACAGAAAGACAGCTTCTCTGAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568594.5
CDS CAA 90 bp GCAGGACACAGGACTGTTCAGAGAAGCTGTCTTTCTGTGCATTTGTaGGTTGCACACCAGAGTGTGCTTGTCTGTTTACACATCTGTGTC +
Preference number: 6 (lower is better)
Translates to: AGHRTVQRSCLSVHL*VAHQSVLVCLHICV
Trigger: GACACAGATGTGTAAACAGACAAGCACACTCTGGTGTGCAACCAACAAATGCACAGAAAGACAGCTTCTCTGAACAGTCCTGTGTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563133.5
CDS CCA 72 bp GGACTGTTCAGAGAAGCTGTCTTTCTGTGCATTTGTTaGTTGCTAGGGAAAAACAGGCCCATATCAGGAAGG +
Preference number: 6 (lower is better)
Translates to: GLFREAVFLCIC*LLGKNRPISGR
Trigger: CCTTCCTGATATGGGCCTGTTTTTCCCTAGCAACCAACAAATGCACAGAAAGACAGCTTCTCTGAACAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568594.5
CDS CCA 72 bp GGCCATGCCCACCTCCCACCATTTTCTGAAGCTACTTaGGCTCTTGACTTTTCTTTATGGATTGGGAGAAAA +
Preference number: 6 (lower is better)
Translates to: GHAHLPPFSEAT*ALDFSLWIGRK
Trigger: TTTTCTCCCAATCCATAAAGAAAAGTCAAGAGCCCAAGTAGCTTCAGAAAATGGTGGGAGGTGGGCATGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567662.5
CDS CAA 72 bp CACAGGACTGTTCAGAGAAGCTGTCTTTCTGTGCATTaGTTGGTTGCTAGGGAAAAACAGGCCCATATCAGG +
Preference number: 6 (lower is better)
Translates to: HRTVQRSCLSVH*LVAREKQAHIR
Trigger: CCTGATATGGGCCTGTTTTTCCCTAGCAACCAACAAATGCACAGAAAGACAGCTTCTCTGAACAGTCCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568594.5
CDS CAA 90 bp TTTGCAGGACACAGGACTGTTCAGAGAAGCTGTCTTTCTGTGCATTaGTTGGTTGCACACCAGAGTGTGCTTGTCTGTTTACACATCTGT +
Preference number: 6 (lower is better)
Translates to: FAGHRTVQRSCLSVH*LVAHQSVLVCLHIC
Trigger: ACAGATGTGTAAACAGACAAGCACACTCTGGTGTGCAACCAACAAATGCACAGAAAGACAGCTTCTCTGAACAGTCCTGTGTCCTGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563133.5
CDS CCA 72 bp GGACTGTTCAGAGAAGCTGTCTTTCTGTGCATTTGTTaGTTGCACACCAGAGTGTGCTTGTCTGTTTACACA +
Preference number: 6 (lower is better)
Translates to: GLFREAVFLCIC*LHTRVCLSVYT
Trigger: TGTGTAAACAGACAAGCACACTCTGGTGTGCAACCAACAAATGCACAGAAAGACAGCTTCTCTGAACAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563133.5
CDS CAA 72 bp CACAGGACTGTTCAGAGAAGCTGTCTTTCTGTGCATTaGTTGGTTGCACACCAGAGTGTGCTTGTCTGTTTA +
Preference number: 6 (lower is better)
Translates to: HRTVQRSCLSVH*LVAHQSVLVCL
Trigger: TAAACAGACAAGCACACTCTGGTGTGCAACCAACAAATGCACAGAAAGACAGCTTCTCTGAACAGTCCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563133.5