RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRAMD1C (Homo sapiens)

Ensembl gene IDs: ENSG00000178075

Ensembl transcript IDs: ENST00000358160.9, ENST00000440446.2, ENST00000462838.5, ENST00000466898.1, ENST00000467895.1, ENST00000472026.5, ENST00000472384.5, ENST00000479212.5, ENST00000484714.2, ENST00000486457.5, ENST00000488680.1, ENST00000491038.1, ENST00000498183.5

Found 286 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAACAAACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTaGAATTCACCCAGAGAAACCCATTTTCCCTCTAACGGAGTCAAT +
Preference number: 1 (lower is better)
Translates to: KQTQVGSLLPLGMLR*NSPRETHFPSNGVN
Trigger: ATTGACTCCGTTAGAGGGAAAATGGGTTTCTCTGGGTGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR CCA 90 bp CCTGTTTATCCTCTTGGTCTTATCTCAGTTACAAAAGCGACCTATTaGACATGTACGGATTCTGTGCTAACAAAGCATCAGACTTCACTG +
Preference number: 1 (lower is better)
Translates to: PVYPLGLISVTKATY*TCTDSVLTKHQTSL
Trigger: CAGTGAAGTCTGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACTGAGATAAGACCAAGAGGATAAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR GCA 90 bp GACTATAGTGTAGGTCATCGTTCTCAGCTGATCACCTCCAAGTTCTaGAGTCCAAGGGGTAGATACTACATCTATTATATTTCTAGAACT +
Preference number: 1 (lower is better)
Translates to: DYSVGHRSQLITSKF*SPRGRYYIYYISRT
Trigger: AGTTCTAGAAATATAATAGATGTAGTATCTACCCCTTGGACTGCAGAACTTGGAGGTGATCAGCTGAGAACGATGACCTACACTATAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472384.5
3UTR TCA 90 bp AATCTGTGGAAACTCTTAGCCTGCATTTCTGTTTTGAAGATCGGATaGTACAGTATCTGTTCACGGTATAGAAGTAATCATGGTAGGGGA +
Preference number: 1 (lower is better)
Translates to: NLWKLLACISVLKIG*YSICSRYRSNHGRG
Trigger: TCCCCTACCATGATTACTTCTATACCGTGAACAGATACTGTATCATCCGATCTTCAAAACAGAAATGCAGGCTAAGAGTTTCCACAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472384.5
3UTR-3UTR TCA 90 bp GGTAGGGGACATCATGTGTCAGTACTTCTGAATCTACCAAATAAAATCGTGCTTGTCATCGTTCTCAGCTaGTCACCTCCAAGTTCTGCA +
Preference number: 2 (lower is better)
Translates to: GRGHHVSVLLNLPNKIVLVIVLS*SPPSSA
Trigger: TGCAGAACTTGGAGGTGATCAGCTGAGAACGATGAC...AAGCACGATTTTATTTGGTAGATTCAGAAGTACTGACACATGATGTCCCCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472384.5
3UTR-3UTR TCA 90 bp AATTTTTCATCTCTCTCCCCAGAGTCATCCAAGCTGCTTCTTCCTGGACTTCTTTTCATCAACAGAATCTaGAGTGCTGCTTTTGTCCAG +
Preference number: 2 (lower is better)
Translates to: NFSSLSPESSKLLLPGLLFINRI*SAAFVQ
Trigger: CTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAA...AAGAAGTCCAGGAAGAAGCAGCTTGGATGACTCTGGGGAGAGAGATGAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000484714.2
3UTR-3UTR GCA 90 bp AAGTCCAGTGACTTTGATGGCACTCTAGTTAACTTCTTTTCCAAAGTTGGTAAGCCTGGACTTCTTGGCTaGACATCCTCAATCGACAGT +
Preference number: 2 (lower is better)
Translates to: KSSDFDGTLVNFFSKVGKPGLLG*TSSIDS
Trigger: ACTGTCGATTGAGGATGTGCAGCCAAGAAGTCCAGG...CTTACCAACTTTGGAAAAGAAGTTAACTAGAGTGCCATCAAAGTCACTGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484714.2
3UTR-3UTR CCA 90 bp AAGTCCAGTGACTTTGATGGCACTCTAGTTAACTTCTTTTCCAAAGTTGGTAAGCAAGCTGCTTCTTCCTaGACTTCTTGGCTGCACATC +
Preference number: 2 (lower is better)
Translates to: KSSDFDGTLVNFFSKVGKQAASS*TSWLHI
Trigger: GATGTGCAGCCAAGAAGTCCAGGAAGAAGCAGCTTG...CTTACCAACTTTGGAAAAGAAGTTAACTAGAGTGCCATCAAAGTCACTGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484714.2
3UTR CAA 90 bp TCCTGTTTATCCTCTTGGTCTTATCTCAGTTACAAAAGCGACCTATaGGACATGTACGGATTCTGTGCTAACAAAGCATCAGACTTCACT +
Preference number: 2 (lower is better)
Translates to: SCLSSWSYLSYKSDL*DMYGFCANKASDFT
Trigger: AGTGAAGTCTGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACTGAGATAAGACCAAGAGGATAAACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR-3UTR TCA 90 bp CTAGAACTGGCAAATTTCTGCATAAAGCGTGAACTGGTAAAGAGCAATTCAAACATCCTCAATCGACAGTaGCAAGTTTTCCATCTCCTC +
Preference number: 2 (lower is better)
Translates to: LELANFCIKRELVKSNSNILNRQ*QVFHLL
Trigger: GAGGAGATGGAAAACTTGTCACTGTCGATTGAGGAT...GTTTGAATTGCTCTTTACCAGTTCACGCTTTATGCAGAAATTTGCCAGTTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484714.2
3UTR-3UTR GCA 90 bp TCCTCTTTGCCTAATCCTCCTTTTGATGAATTTCCATCGAATGACTCTGTTTCTTTAAACCTAGCTCAGTaGCATAGTTCTGCTGGAGCA +
Preference number: 2 (lower is better)
Translates to: SSLPNPPFDEFPSNDSVSLNLAQ*HSSAGA
Trigger: TGCTCCAGCAGAACTATGGCACTGAGCTAGGTTTAA...AGAAACAGAGTCATTCGATGGAAATTCATCAAAAGGAGGATTAGGCAAAGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484714.2
3UTR-3UTR CCA 90 bp ATTCTTGCTTACAGCCAGACACTACATAAATCCTTACCAAAACAAAACAAACCCTCAGTACACTTGTACTaGGACATACGTGCCCCTGAA +
Preference number: 2 (lower is better)
Translates to: ILAYSQTLHKSLPKQNKPSVHLY*DIRAPE
Trigger: TTCAGGGGCACGTATGTCCCAGTACAAGTGTACTGA...GGGTTTGTTTTGTTTTGGTAAGGATTTATGTAGTGTCTGGCTGTAAGCAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR-3UTR TCA 90 bp CCCTCTAACGGAGTCAATACTTTCATTCTCTACAGGCATCTCAAAAATGACTATTGTTGGTATTCTAAGTaGGGAGGCAAGATAATCCCA +
Preference number: 2 (lower is better)
Translates to: PSNGVNTFILYRHLKNDYCWYSK*GGKIIP
Trigger: TGGGATTATCTTGCCTCCTCACTTAGAATACCAACA...ATAGTCATTTTTGAGATGCCTGTAGAGAATGAAAGTATTGACTCCGTTAGAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR-3UTR TCA 90 bp CCAAGTTCTGCAGTCCAAGGGGTAGATACTACATCTATTATATTTCTAGAACTGTTCATCAACAGAATCTaGAGTGCTGCTTTTGTCCAG +
Preference number: 2 (lower is better)
Translates to: PSSAVQGVDTTSIIFLELFINRI*SAAFVQ
Trigger: CTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAA...CAGTTCTAGAAATATAATAGATGTAGTATCTACCCCTTGGACTGCAGAACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472384.5
3UTR-3UTR GCA 90 bp TCAGTACTTCTGAATCTACCAAATAAAATCGTGCTTCCCGACTTTCTTTATACAATCACCTCCAAGTTCTaGAGTCCAAGGGGTAGATAC +
Preference number: 2 (lower is better)
Translates to: SVLLNLPNKIVLPDFLYTITSKF*SPRGRY
Trigger: GTATCTACCCCTTGGACTGCAGAACTTGGAGGTGAT...TGTATAAAGAAAGTCGGGAAGCACGATTTTATTTGGTAGATTCAGAAGTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472384.5
3UTR-3UTR CCA 90 bp AAACAAACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCATACAGTACACAAACCTaGAAATGTTATATGCCTGAA +
Preference number: 2 (lower is better)
Translates to: KQTQVGSLLPLGMLRWNSYSTQT*KCYMPE
Trigger: TTCAGGCATATAACATTTCCAGGTTTGTGTACTGTA...TGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR-3UTR GCA 90 bp CCCTCTAACGGAGTCAATACTTTCATTCTCTACAGGCATCTCAAAAATGACTATAGTTCCAAGTATCTCTaGGGTTTTAGTCCTTCAGAT +
Preference number: 2 (lower is better)
Translates to: PSNGVNTFILYRHLKNDYSSKYL*GFSPSD
Trigger: ATCTGAAGGACTAAAACCGCAGAGATACTTGGAACT...ATAGTCATTTTTGAGATGCCTGTAGAGAATGAAAGTATTGACTCCGTTAGAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR-3UTR GCA 90 bp TCATTCTCTACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGAGTTCCAAGTATCTCTaGGGTTTTAGTCCTTCAGAT +
Preference number: 2 (lower is better)
Translates to: SFSTGISKMTIIMPCGFGSSKYL*GFSPSD
Trigger: ATCTGAAGGACTAAAACCGCAGAGATACTTGGAACT...CCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTAGAGAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR-3UTR GCA 90 bp TACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGGACTCTGGCCTGGAAATGTTATATaGCTGAAAACAGAACCTTTA +
Preference number: 2 (lower is better)
Translates to: YRHLKNDYNNAMWLWGLWPGNVI*LKTEPL
Trigger: TAAAGGTTCTGTTTTCAGGCATATAACATTTCCAGG...CCAGAGTCCCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR-3UTR GCA 90 bp CTAGAACTGGCAAATTTCTGCATAAAGCGTGAACTGGTAAAGAGCAATTCAAACCAACAGAATCTGAAGTaGTGCTTTTGTCCAGAGAAA +
Preference number: 2 (lower is better)
Translates to: LELANFCIKRELVKSNSNQQNLK*CFCPEK
Trigger: TTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTG...GTTTGAATTGCTCTTTACCAGTTCACGCTTTATGCAGAAATTTGCCAGTTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472384.5
ENST00000484714.2
3UTR-3UTR CCA 90 bp CCCTCTAACGGAGTCAATACTTTCATTCTCTACAGGCATCTCAAAAATGACTATCATAAAGATACAGCATaGCAGAAGACCCTTTCTGAT +
Preference number: 2 (lower is better)
Translates to: PSNGVNTFILYRHLKNDYHKDTA*QKTLSD
Trigger: ATCAGAAAGGGTCTTCTGCCATGCTGTATCTTTATG...ATAGTCATTTTTGAGATGCCTGTAGAGAATGAAAGTATTGACTCCGTTAGAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR CAA 90 bp AGTAATGACATAGAGGTTTCTTCTTATATTGTCCTGTTTATCCTCTaGGTCTTATCTCAGTTACAAAAGCGACCTATTGGACATGTACGG +
Preference number: 2 (lower is better)
Translates to: SNDIEVSSYIVLFIL*VLSQLQKRPIGHVR
Trigger: CCGTACATGTCCAATAGGTCGCTTTTGTAACTGAGATAAGACCAAGAGGATAAACAGGACAATATAAGAAGAAACCTCTATGTCATTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR-3UTR TCA 90 bp TCAGTACTTCTGAATCTACCAAATAAAATCGTGCTTCCCGACTTTCTTTATACATTTCTGCATAAAGCGTaGACTGGTAAAGAGCAATTC +
Preference number: 2 (lower is better)
Translates to: SVLLNLPNKIVLPDFLYTFLHKA*TGKEQF
Trigger: GAATTGCTCTTTACCAGTTCACGCTTTATGCAGAAA...TGTATAAAGAAAGTCGGGAAGCACGATTTTATTTGGTAGATTCAGAAGTACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472384.5
3UTR-3UTR GCA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTAGTTCCAAGTATCTCTaGGGTTTTAGTCCTTCAGAT +
Preference number: 2 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFSSKYL*GFSPSD
Trigger: ATCTGAAGGACTAAAACCGCAGAGATACTTGGAACT...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
3UTR-3UTR CCA 90 bp ATTCTTGCTTACAGCCAGACACTACATAAATCCTTACCAAAACAAAACAAACCCTGGCTTTGGGGACTCTaGAGAAAAATGAAACATTTA +
Preference number: 2 (lower is better)
Translates to: ILAYSQTLHKSLPKQNKPWLWGL*RKMKHL
Trigger: TAAATGTTTCATTTTTCTCCAGAGTCCCCAAAGCCA...GGGTTTGTTTTGTTTTGGTAAGGATTTATGTAGTGTCTGGCTGTAAGCAAGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR-3UTR CCA 90 bp ATTCTTGCTTACAGCCAGACACTACATAAATCCTTACCAAAACAAAACAAACCCAATGAGCCACTTGTATaGAGACACATATGCATAAAA +
Preference number: 2 (lower is better)
Translates to: ILAYSQTLHKSLPKQNKPNEPLV*RHICIK
Trigger: TTTTATGCATATGTGTCTCCATACAAGTGGCTCATT...GGGTTTGTTTTGTTTTGGTAAGGATTTATGTAGTGTCTGGCTGTAAGCAAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR CCA 72 bp CAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTaGAATTCACCCAGAGAAACCCATTTTCCCTCTAAC +
Preference number: 3 (lower is better)
Translates to: QVGSLLPLGMLR*NSPRETHFPSN
Trigger: GTTAGAGGGAAAATGGGTTTCTCTGGGTGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR GCA 72 bp ATAATTTTTCATCTCTCTCCCCAGAGTCATCCAAGCTaGTTCTTCCTGGACTTCTTGGCTGCACATCCTCAA +
Preference number: 3 (lower is better)
Translates to: IIFHLSPQSHPS*FFLDFLAAHPQ
Trigger: TTGAGGATGTGCAGCCAAGAAGTCCAGGAAGAAGCAGCTTGGATGACTCTGGGGAGAGAGATGAAAAATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484714.2
3UTR GCA 72 bp GTAGGTCATCGTTCTCAGCTGATCACCTCCAAGTTCTaGAGTCCAAGGGGTAGATACTACATCTATTATATT +
Preference number: 3 (lower is better)
Translates to: VGHRSQLITSKF*SPRGRYYIYYI
Trigger: AATATAATAGATGTAGTATCTACCCCTTGGACTGCAGAACTTGGAGGTGATCAGCTGAGAACGATGACCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472384.5
3UTR CCA 72 bp CCTCTTGGTCTTATCTCAGTTACAAAAGCGACCTATTaGACATGTACGGATTCTGTGCTAACAAAGCATCAG +
Preference number: 3 (lower is better)
Translates to: PLGLISVTKATY*TCTDSVLTKHQ
Trigger: CTGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACTGAGATAAGACCAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR-3UTR CAA 90 bp TCTGTTTCTGAAACCCGACTAATTGATTCACTGGTAAAACTGATTGACTTGGATTTCTTCCTGGACTTCTaGGCTGCACATCCTCAATCG +
Preference number: 3 (lower is better)
Translates to: SVSETRLIDSLVKLIDLDFFLDF*AAHPQS
Trigger: CGATTGAGGATGTGCAGCCAAGAAGTCCAGGAAGAA...ATCCAAGTCAATCAGTTTTACCAGTGAATCAATTAGTCGGGTTTCAGAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484714.2
3UTR-3UTR CAA 90 bp TACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGGACTCTGGATTTTAATGAGCCACTaGTATGGAGACACATATGCA +
Preference number: 3 (lower is better)
Translates to: YRHLKNDYNNAMWLWGLWILMSH*YGDTYA
Trigger: TGCATATGTGTCTCCATACAAGTGGCTCATTAAAAT...CCAGAGTCCCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR-3UTR CAA 90 bp CTTGCATCTGAGTTAAAACTTGATAGTCAGTACACTTGTACTGGGACATACGTGAGGTTTCTTCTTATATaGTCCTGTTTATCCTCTTGG +
Preference number: 3 (lower is better)
Translates to: LASELKLDSQYTCTGTYVRFLLI*SCLSSW
Trigger: CCAAGAGGATAAACAGGACAATATAAGAAGAAACCT...CACGTATGTCCCAGTACAAGTGTACTGACTATCAAGTTTTAACTCAGATGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR-3UTR CAA 90 bp GACTTTAACAGAGAAATCTTCAAGTTTATAATCCACTCATTCTTGCTTACAGCCGGATGGTTCTTCCTTTaGACTGTTGGTATTCTAAGT +
Preference number: 3 (lower is better)
Translates to: DFNREIFKFIIHSFLLTAGWFFL*TVGILS
Trigger: ACTTAGAATACCAACAGTCAAAAGGAAGAACCATCC...GGCTGTAAGCAAGAATGAGTGGATTATAAACTTGAAGATTTCTCTGTTAAAGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR-3UTR CAA 90 bp ATTCTTGCTTACAGCCAGACACTACATAAATCCTTACCAAAACAAAACAAACCCATTTTAATGAGCCACTaGTATGGAGACACATATGCA +
Preference number: 3 (lower is better)
Translates to: ILAYSQTLHKSLPKQNKPILMSH*YGDTYA
Trigger: TGCATATGTGTCTCCATACAAGTGGCTCATTAAAAT...GGGTTTGTTTTGTTTTGGTAAGGATTTATGTAGTGTCTGGCTGTAAGCAAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR-3UTR CAA 90 bp TCAGTACTTCTGAATCTACCAAATAAAATCGTGCTTCCCGACTTTCTTTATACATCTGAAGTGCTGCTTTaGTCCAGAGAAAGATATTCA +
Preference number: 3 (lower is better)
Translates to: SVLLNLPNKIVLPDFLYTSEVLL*SRERYS
Trigger: TGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGA...TGTATAAAGAAAGTCGGGAAGCACGATTTTATTTGGTAGATTCAGAAGTACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472384.5
3UTR TCA 72 bp AAACTCTTAGCCTGCATTTCTGTTTTGAAGATCGGATaGTACAGTATCTGTTCACGGTATAGAAGTAATCAT +
Preference number: 3 (lower is better)
Translates to: KLLACISVLKIG*YSICSRYRSNH
Trigger: ATGATTACTTCTATACCGTGAACAGATACTGTATCATCCGATCTTCAAAACAGAAATGCAGGCTAAGAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR GCA 90 bp TTGGTCTTATCTCAGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCACCTCCAGCGCGCGCTaGGAGTTACAGGCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: LVLSQLQKRPIGHVRILCTSSAR*ELQAPR
Trigger: GCGCGGAGCCTGTAACTCGCAGCGCGCGCTGGAGGT...GCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACTGAGATAAGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358160.9
CDS-3UTR TCA 90 bp ACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCACCCAGAGTCATCGTTCTCAGCTaGTCACCTCCAAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: TQVGSLLPLGMLRWNSPRVIVLS*SPPSSA
Trigger: TGCAGAACTTGGAGGTGATCAGCTGAGAACGATGAC...TCTGGGTGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp ACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCACCCAGAATCACCTCCAAGTTCTaGAGTCCAAGGGGTAGATAC +
Preference number: 4 (lower is better)
Translates to: TQVGSLLPLGMLRWNSPRITSKF*SPRGRY
Trigger: GTATCTACCCCTTGGACTGCAGAACTTGGAGGTGAT...TCTGGGTGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR TCA 90 bp TCATTCTCTACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGCCTTCATTCATCACCTaGCGGACAGTCGGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: SFSTGISKMTIIMPCGFGPSFIT*RTVGAP
Trigger: GGGCGCTCCGACTGTCCGTCAGGTGATGAATGAAGG...CCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTAGAGAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358160.9
CDS-3UTR TCA 90 bp CTGAATCTACCAAATAAAATCGTGCTTCCCGACTTTCTTTATACAGTGTCTGCTCCTTCATTCATCACCTaGCGGACAGTCGGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: LNLPNKIVLPDFLYTVSAPSFIT*RTVGAP
Trigger: GGGCGCTCCGACTGTCCGTCAGGTGATGAATGAAGG...AGCAGACACTGTATAAAGAAAGTCGGGAAGCACGATTTTATTTGGTAGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR TCA 90 bp AAGTCCAGTGACTTTGATGGCACTCTAGTTAACTTCTTTTCCAAAGTTGGTAAGCCTTCATTCATCACCTaGCGGACAGTCGGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: KSSDFDGTLVNFFSKVGKPSFIT*RTVGAP
Trigger: GGGCGCTCCGACTGTCCGTCAGGTGATGAATGAAGG...CTTACCAACTTTGGAAAAGAAGTTAACTAGAGTGCCATCAAAGTCACTGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR GCA 90 bp TTTTCATCTCTCTCCCCAGAGTCATCCAAGCTGCTTCTTCCTGGACTTCTTGGCTTAAACCTAGCTCAGTaGCATAGTTCTGCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: FSSLSPESSKLLLPGLLGLNLAQ*HSSAGA
Trigger: TGCTCCAGCAGAACTATGGCACTGAGCTAGGTTTAA...GCCAAGAAGTCCAGGAAGAAGCAGCTTGGATGACTCTGGGGAGAGAGATGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR TCA 90 bp ACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCACCCAGATTCATCAACAGAATCTaGAGTGCTGCTTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TQVGSLLPLGMLRWNSPRFINRI*SAAFVQ
Trigger: CTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAA...TCTGGGTGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR TCA 90 bp AAACAAACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCAGTCATCGTTCTCAGCTaGTCACCTCCAAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: KQTQVGSLLPLGMLRWNSVIVLS*SPPSSA
Trigger: TGCAGAACTTGGAGGTGATCAGCTGAGAACGATGAC...TGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp ACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCACCCAGAAGCACAAGCATAATCTaGTATCAGCCTCTCTGTATC +
Preference number: 4 (lower is better)
Translates to: TQVGSLLPLGMLRWNSPRSTSII*YQPLCI
Trigger: GATACAGAGAGGCTGATAGCAGATTATGCTTGTGCT...TCTGGGTGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358160.9
CDS-3UTR CCA 90 bp AGTTTTCCATCTCCTCAGCATTTAAACCTAGCTCAGTGCCATAGTTCTGCTGGACTTCCTGTAAGTCGGTaGCAAGGCTTGAATCCCCTT +
Preference number: 4 (lower is better)
Translates to: SFPSPQHLNLAQCHSSAGLPVSR*QGLNPL
Trigger: AAGGGGATTCAAGCCTTGCCACCGACTTACAGGAAG...TCCAGCAGAACTATGGCACTGAGCTAGGTTTAAATGCTGAGGAGATGGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR GCA 90 bp AAACAAACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCACAGAGTCATCCAAGCTaGTTCTTCCTGGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: KQTQVGSLLPLGMLRWNSQSHPS*FFLDFL
Trigger: CAAGAAGTCCAGGAAGAAGCAGCTTGGATGACTCTG...TGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp AATTTTTCATCTCTCTCCCCAGAGTCATCCAAGCTGCTTCTTCCTGGACTTCTTCAGAGTCATCCAAGCTaGTTCTTCCTGGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: NFSSLSPESSKLLLPGLLQSHPS*FFLDFL
Trigger: CAAGAAGTCCAGGAAGAAGCAGCTTGGATGACTCTG...AAGAAGTCCAGGAAGAAGCAGCTTGGATGACTCTGGGGAGAGAGATGAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR GCA 90 bp TTTTCATCTCTCTCCCCAGAGTCATCCAAGCTGCTTCTTCCTGGACTTCTTGGCCAACAGAATCTGAAGTaGTGCTTTTGTCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: FSSLSPESSKLLLPGLLGQQNLK*CFCPEK
Trigger: TTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTG...GCCAAGAAGTCCAGGAAGAAGCAGCTTGGATGACTCTGGGGAGAGAGATGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR GCA 90 bp ACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCACCCAGAGAACTGGCAAATTTCTaGATAAAGCGTGAACTGGTA +
Preference number: 4 (lower is better)
Translates to: TQVGSLLPLGMLRWNSPRELANF*IKRELV
Trigger: TACCAGTTCACGCTTTATGCAGAAATTTGCCAGTTC...TCTGGGTGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp TACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGGACTCTGGCTTCCTGTAAGTCGGTaGCAAGGCTTGAATCCCCTT +
Preference number: 4 (lower is better)
Translates to: YRHLKNDYNNAMWLWGLWLPVSR*QGLNPL
Trigger: AAGGGGATTCAAGCCTTGCCACCGACTTACAGGAAG...CCAGAGTCCCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358160.9
CDS-3UTR CCA 90 bp AGGGGACATCATGTGTCAGTACTTCTGAATCTACCAAATAAAATCGTGCTTCCCCTTCCTGTAAGTCGGTaGCAAGGCTTGAATCCCCTT +
Preference number: 4 (lower is better)
Translates to: RGHHVSVLLNLPNKIVLPLPVSR*QGLNPL
Trigger: AAGGGGATTCAAGCCTTGCCACCGACTTACAGGAAG...GGGAAGCACGATTTTATTTGGTAGATTCAGAAGTACTGACACATGATGTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR CCA 90 bp AAACAAACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCATCTTCCTGGACTTCTTaGCTGCACATCCTCAATCGA +
Preference number: 4 (lower is better)
Translates to: KQTQVGSLLPLGMLRWNSSSWTS*LHILNR
Trigger: TCGATTGAGGATGTGCAGCCAAGAAGTCCAGGAAGA...TGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp AATTTTTCATCTCTCTCCCCAGAGTCATCCAAGCTGCTTCTTCCTGGACTTCTTTCTTCCTGGACTTCTTaGCTGCACATCCTCAATCGA +
Preference number: 4 (lower is better)
Translates to: NFSSLSPESSKLLLPGLLSSWTS*LHILNR
Trigger: TCGATTGAGGATGTGCAGCCAAGAAGTCCAGGAAGA...AAGAAGTCCAGGAAGAAGCAGCTTGGATGACTCTGGGGAGAGAGATGAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR CCA 90 bp TACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGGACTCTGGGTTCAAGCATCACTATaGAGTCTCGGAGCACTCCCT +
Preference number: 4 (lower is better)
Translates to: YRHLKNDYNNAMWLWGLWVQASL*SLGALP
Trigger: AGGGAGTGCTCCGAGACTCCATAGTGATGCTTGAAC...CCAGAGTCCCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp AAACAAACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCATCAGTACACTTGTACTaGGACATACGTGCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: KQTQVGSLLPLGMLRWNSSVHLY*DIRAPE
Trigger: TTCAGGGGCACGTATGTCCCAGTACAAGTGTACTGA...TGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp AAGTGGACTATTAAGGACTATAGTGTAGGTCATCGTTCTCAGCTGATCACCTCCCATTTTGGGACTCCTTaGCTGCACATCCTCAATCGA +
Preference number: 4 (lower is better)
Translates to: KWTIKDYSVGHRSQLITSHFGTP*LHILNR
Trigger: TCGATTGAGGATGTGCAGCCAAGGAGTCCCAAAATG...GGAGGTGATCAGCTGAGAACGATGACCTACACTATAGTCCTTAATAGTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR TCA 90 bp AGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCATTTCTGCTGTTCGGTTaGAGGTTCGCCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SYKSDLLDMYGFCANKASFLLFG*RFAFSF
Trigger: GAAGGAGAAGGCGAACCTTCAACCGAACAGCAGAAA...TGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR TCA 90 bp CTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCAGACTTCACTGTAGAATTTCTGCTGTTCGGTTaGAGGTTCGCCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LLDMYGFCANKASDFTVEFLLFG*RFAFSF
Trigger: GAAGGAGAAGGCGAACCTTCAACCGAACAGCAGAAA...TTCTACAGTGAAGTCTGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp CTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCAGACTTCACTGTAGAACCTGGACTTCTTGGCTaGACATCCTCAATCGACAGT +
Preference number: 4 (lower is better)
Translates to: LLDMYGFCANKASDFTVEPGLLG*TSSIDS
Trigger: ACTGTCGATTGAGGATGTGCAGCCAAGAAGTCCAGG...TTCTACAGTGAAGTCTGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp TACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGGACTCTGGTGTCTAGTCAGGCTCTaGAAACCAAGGAGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: YRHLKNDYNNAMWLWGLWCLVRL*KPRRVS
Trigger: AGAGACTCTCCTTGGTTTGCAGAGCCTGACTAGACA...CCAGAGTCCCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440446.2
CDS-3UTR CCA 90 bp CTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCAGACTTCACTGTAGAAGTTCAAGCATCACTATaGAGTCTCGGAGCACTCCCT +
Preference number: 4 (lower is better)
Translates to: LLDMYGFCANKASDFTVEVQASL*SLGALP
Trigger: AGGGAGTGCTCCGAGACTCCATAGTGATGCTTGAAC...TTCTACAGTGAAGTCTGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp TGTCTGCTTTTCAGTGGCAGCAGTGCATTTTCCAGTAAGTGGACTATTAAGGACGTCTGTTTCTCATTTTaGGACTCCTTGGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: CLLFSGSSAFSSKWTIKDVCFSF*DSLAAH
Trigger: ATGTGCAGCCAAGGAGTCCCAAAATGAGAAACAGAC...GTCCTTAATAGTCCACTTACTGGAAAATGCACTGCTGCCACTGAAAAGCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR TCA 90 bp AGTTTTCCATCTCCTCAGCATTTAAACCTAGCTCAGTGCCATAGTTCTGCTGGATTCATCAACAGAATCTaGAGTGCTGCTTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SFPSPQHLNLAQCHSSAGFINRI*SAAFVQ
Trigger: CTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAA...TCCAGCAGAACTATGGCACTGAGCTAGGTTTAAATGCTGAGGAGATGGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR TCA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTGGTGCCTTGCTAGAATaGGAGAATGCACCTCACGGA +
Preference number: 4 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGGALLE*ENAPHG
Trigger: TCCGTGAGGTGCATTCTCTCATTCTAGCAAGGCACC...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472026.5
CDS-3UTR GCA 90 bp AGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCATTCTGCTGGAGCAGTTaGCAGAATTCCTGTCTAGTC +
Preference number: 4 (lower is better)
Translates to: SYKSDLLDMYGFCANKASFCWSS*QNSCLV
Trigger: GACTAGACAGGAATTCTGGCAACTGCTCCAGCAGAA...TGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp CTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCAGACTTCACTGTAGAATTCTGCTGGAGCAGTTaGCAGAATTCCTGTCTAGTC +
Preference number: 4 (lower is better)
Translates to: LLDMYGFCANKASDFTVEFCWSS*QNSCLV
Trigger: GACTAGACAGGAATTCTGGCAACTGCTCCAGCAGAA...TTCTACAGTGAAGTCTGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp TCATTCTCTACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGCCTGGACTTCTTGGCTaGACATCCTCAATCGACAGT +
Preference number: 4 (lower is better)
Translates to: SFSTGISKMTIIMPCGFGPGLLG*TSSIDS
Trigger: ACTGTCGATTGAGGATGTGCAGCCAAGAAGTCCAGG...CCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTAGAGAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp TCCTCTTTGCCTAATCCTCCTTTTGATGAATTTCCATCGAATGACTCTGTTTCTCCTGGACTTCTTGGCTaGACATCCTCAATCGACAGT +
Preference number: 4 (lower is better)
Translates to: SSLPNPPFDEFPSNDSVSPGLLG*TSSIDS
Trigger: ACTGTCGATTGAGGATGTGCAGCCAAGAAGTCCAGG...AGAAACAGAGTCATTCGATGGAAATTCATCAAAAGGAGGATTAGGCAAAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR GCA 90 bp GACTTCACTGTAGAAATGAGACCATACCACTCAATTCAGGGTGTGTCATTTTCTCAGAGTCATCCAAGCTaGTTCTTCCTGGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: DFTVEMRPYHSIQGVSFSQSHPS*FFLDFL
Trigger: CAAGAAGTCCAGGAAGAAGCAGCTTGGATGACTCTG...AGAAAATGACACACCCTGAATTGAGTGGTATGGTCTCATTTCTACAGTGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp AGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCAATCACCTCCAAGTTCTaGAGTCCAAGGGGTAGATAC +
Preference number: 4 (lower is better)
Translates to: SYKSDLLDMYGFCANKASITSKF*SPRGRY
Trigger: GTATCTACCCCTTGGACTGCAGAACTTGGAGGTGAT...TGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp TCATTCTCTACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGCAAGCTGCTTCTTCCTaGACTTCTTGGCTGCACATC +
Preference number: 4 (lower is better)
Translates to: SFSTGISKMTIIMPCGFGQAASS*TSWLHI
Trigger: GATGTGCAGCCAAGAAGTCCAGGAAGAAGCAGCTTG...CCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTAGAGAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp TTGGTCTTATCTCAGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCCTAGGTATGCTTCGTTaGAATTCACCCAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: LVLSQLQKRPIGHVRILCLGMLR*NSPRET
Trigger: GGTTTCTCTGGGTGAATTCCAACGAAGCATACCTAG...GCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACTGAGATAAGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR TCA 90 bp AGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCAATCCTCAATCGACAGTaGCAAGTTTTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: SYKSDLLDMYGFCANKASILNRQ*QVFHLL
Trigger: GAGGAGATGGAAAACTTGTCACTGTCGATTGAGGAT...TGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR TCA 90 bp AGGGGACATCATGTGTCAGTACTTCTGAATCTACCAAATAAAATCGTGCTTCCCTTCATCAACAGAATCTaGAGTGCTGCTTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RGHHVSVLLNLPNKIVLPFINRI*SAAFVQ
Trigger: CTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAA...GGGAAGCACGATTTTATTTGGTAGATTCAGAAGTACTGACACATGATGTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR TCA 90 bp AAACAAACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCATTTCAATTAAAGATTTaGCAAGGCCCCATGGCTGTT +
Preference number: 4 (lower is better)
Translates to: KQTQVGSLLPLGMLRWNSFQLKI*QGPMAV
Trigger: AACAGCCATGGGGCCTTGTCAAATCTTTAATTGAAA...TGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR TCA 90 bp AAACAAACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCAAGATCAAACGTTTTCTaGAGCATAATGAGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: KQTQVGSLLPLGMLRWNSRSNVF*SIMSEL
Trigger: GAGCTCACTCATTATGCTTCAGAAAACGTTTGATCT...TGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp CTTGCATCTGAGTTAAAACTTGATAGTCAGTACACTTGTACTGGGACATACGTGTTAAACCTAGCTCAGTaGCATAGTTCTGCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LASELKLDSQYTCTGTYVLNLAQ*HSSAGA
Trigger: TGCTCCAGCAGAACTATGGCACTGAGCTAGGTTTAA...CACGTATGTCCCAGTACAAGTGTACTGACTATCAAGTTTTAACTCAGATGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp TACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGGACTCTGGTTTGGGACTCCTCTTTaGCTAATCCTCCTTTTGATG +
Preference number: 4 (lower is better)
Translates to: YRHLKNDYNNAMWLWGLWFGTPL*LILLLM
Trigger: CATCAAAAGGAGGATTAGGCAAAGAGGAGTCCCAAA...CCAGAGTCCCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp TGTCTGCTTTTCAGTGGCAGCAGTGCATTTTCCAGTAAGTGGACTATTAAGGACCAACAGAATCTGAAGTaGTGCTTTTGTCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: CLLFSGSSAFSSKWTIKDQQNLK*CFCPEK
Trigger: TTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTG...GTCCTTAATAGTCCACTTACTGGAAAATGCACTGCTGCCACTGAAAAGCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR GCA 90 bp TCGACAGTGACAAGTTTTCCATCTCCTCAGCATTTAAACCTAGCTCAGTGCCATGAACTGGCAAATTTCTaGATAAAGCGTGAACTGGTA +
Preference number: 4 (lower is better)
Translates to: STVTSFPSPQHLNLAQCHELANF*IKRELV
Trigger: TACCAGTTCACGCTTTATGCAGAAATTTGCCAGTTC...ATGGCACTGAGCTAGGTTTAAATGCTGAGGAGATGGAAAACTTGTCACTGTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR GCA 90 bp TTGGTCTTATCTCAGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCTTTAGGAACTGTTTCTaGTGTTCGGTTGAAGGTTCG +
Preference number: 4 (lower is better)
Translates to: LVLSQLQKRPIGHVRILCFRNCF*CSVEGS
Trigger: CGAACCTTCAACCGAACAGCAGAAACAGTTCCTAAA...GCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACTGAGATAAGACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTCAAGCTGCTTCTTCCTaGACTTCTTGGCTGCACATC +
Preference number: 4 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGQAASS*TSWLHI
Trigger: GATGTGCAGCCAAGAAGTCCAGGAAGAAGCAGCTTG...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CCA 90 bp TCTGTTTCTGAAACCCGACTAATTGATTCACTGGTAAAACTGATTGACTTGGATCAAGCTGCTTCTTCCTaGACTTCTTGGCTGCACATC +
Preference number: 4 (lower is better)
Translates to: SVSETRLIDSLVKLIDLDQAASS*TSWLHI
Trigger: GATGTGCAGCCAAGAAGTCCAGGAAGAAGCAGCTTG...ATCCAAGTCAATCAGTTTTACCAGTGAATCAATTAGTCGGGTTTCAGAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR CCA 90 bp TCATTCTCTACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGGTGTCTGCTTTTCAGTaGCAGCAGTGCATTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SFSTGISKMTIIMPCGFGVSAFQ*QQCIFQ
Trigger: CTGGAAAATGCACTGCTGCCACTGAAAAGCAGACAC...CCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTAGAGAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp AAACAAACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCATTTGACAAGGCCCCATaGCTGTTTTCTGTATTTCAA +
Preference number: 4 (lower is better)
Translates to: KQTQVGSLLPLGMLRWNSFDKAP*LFSVFQ
Trigger: TTGAAATACAGAAAACAGCCATGGGGCCTTGTCAAA...TGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp TTGGTCTTATCTCAGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCACAAAAGCGACCTATTaGACATGTACGGATTCTGTG +
Preference number: 4 (lower is better)
Translates to: LVLSQLQKRPIGHVRILCTKATY*TCTDSV
Trigger: CACAGAATCCGTACATGTCCAATAGGTCGCTTTTGT...GCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACTGAGATAAGACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp AGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCAAATGCCATGTGGCTTTaGGGACTCTGGAGAAAAATG +
Preference number: 4 (lower is better)
Translates to: SYKSDLLDMYGFCANKASNAMWL*GLWRKM
Trigger: CATTTTTCTCCAGAGTCCCCAAAGCCACATGGCATT...TGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGAGTCTGCGATGTCGCTaGTGCCTTGCTAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRSLRCR*CLARMR
Trigger: TCTCATTCTAGCAAGGCACCAGCGACATCGCAGACT...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472026.5
3UTR CAA 72 bp TCCTCTTGGTCTTATCTCAGTTACAAAAGCGACCTATaGGACATGTACGGATTCTGTGCTAACAAAGCATCA +
Preference number: 4 (lower is better)
Translates to: SSWSYLSYKSDL*DMYGFCANKAS
Trigger: TGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACTGAGATAAGACCAAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR TCA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTGTCATCGTTCTCAGCTaGTCACCTCCAAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFVIVLS*SPPSSA
Trigger: TGCAGAACTTGGAGGTGATCAGCTGAGAACGATGAC...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR TCA 90 bp CCAAGGGGTAGATACTACATCTATTATATTTCTAGAACTGGCAAATTTCTGCATGTCATCGTTCTCAGCTaGTCACCTCCAAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PRGRYYIYYISRTGKFLHVIVLS*SPPSSA
Trigger: TGCAGAACTTGGAGGTGATCAGCTGAGAACGATGAC...ATGCAGAAATTTGCCAGTTCTAGAAATATAATAGATGTAGTATCTACCCCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR TCA 90 bp CTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCAGACTTCACTGTAGAAGTTTTGAAGATCGGATaGTACAGTATCTGTTCACGG +
Preference number: 4 (lower is better)
Translates to: LLDMYGFCANKASDFTVEVLKIG*YSICSR
Trigger: CCGTGAACAGATACTGTATCATCCGATCTTCAAAAC...TTCTACAGTGAAGTCTGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR TCA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTTTTCTGCTGTTCGGTTaGAGGTTCGCCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFFLLFG*RFAFSF
Trigger: GAAGGAGAAGGCGAACCTTCAACCGAACAGCAGAAA...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR TCA 90 bp CTTGCATCTGAGTTAAAACTTGATAGTCAGTACACTTGTACTGGGACATACGTGTGTTGGTATTCTAAGTaGGGAGGCAAGATAATCCCA +
Preference number: 4 (lower is better)
Translates to: LASELKLDSQYTCTGTYVCWYSK*GGKIIP
Trigger: TGGGATTATCTTGCCTCCTCACTTAGAATACCAACA...CACGTATGTCCCAGTACAAGTGTACTGACTATCAAGTTTTAACTCAGATGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTCCTGGACTTCTTGGCTaGACATCCTCAATCGACAGT +
Preference number: 4 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFPGLLG*TSSIDS
Trigger: ACTGTCGATTGAGGATGTGCAGCCAAGAAGTCCAGG...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR GCA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGCAGAGTCATCCAAGCTaGTTCTTCCTGGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRQSHPS*FFLDFL
Trigger: CAAGAAGTCCAGGAAGAAGCAGCTTGGATGACTCTG...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR GCA 90 bp CTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCAGACTTCACTGTAGAATTTGGGACTCCTCTTTaGCTAATCCTCCTTTTGATG +
Preference number: 4 (lower is better)
Translates to: LLDMYGFCANKASDFTVEFGTPL*LILLLM
Trigger: CATCAAAAGGAGGATTAGGCAAAGAGGAGTCCCAAA...TTCTACAGTGAAGTCTGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp CCTCTTTGCCTAATCCTCCTTTTGATGAATTTCCATCGAATGACTCTGTTTCTGTTTGGGACTCCTCTTTaGCTAATCCTCCTTTTGATG +
Preference number: 4 (lower is better)
Translates to: PLCLILLLMNFHRMTLFLFGTPL*LILLLM
Trigger: CATCAAAAGGAGGATTAGGCAAAGAGGAGTCCCAAA...CAGAAACAGAGTCATTCGATGGAAATTCATCAAAAGGAGGATTAGGCAAAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR GCA 90 bp GACTTCACTGTAGAAATGAGACCATACCACTCAATTCAGGGTGTGTCATTTTCTTCTTTATACAGTGTCTaGTTTTCAGTGGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: DFTVEMRPYHSIQGVSFSSLYSV*FSVAAV
Trigger: CACTGCTGCCACTGAAAAGCAGACACTGTATAAAGA...AGAAAATGACACACCCTGAATTGAGTGGTATGGTCTCATTTCTACAGTGAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp AGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCATTTAGGAACTGTTTCTaGTGTTCGGTTGAAGGTTCG +
Preference number: 4 (lower is better)
Translates to: SYKSDLLDMYGFCANKASFRNCF*CSVEGS
Trigger: CGAACCTTCAACCGAACAGCAGAAACAGTTCCTAAA...TGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp TTGGTCTTATCTCAGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCAGTTCCAAGTATCTCTaGGGTTTTAGTCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: LVLSQLQKRPIGHVRILCSSKYL*GFSPSD
Trigger: ATCTGAAGGACTAAAACCGCAGAGATACTTGGAACT...GCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACTGAGATAAGACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTGCTAGAATGAGAGAATaGACCTCACGGATTCTGAGC +
Preference number: 4 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGARMRE*TSRILS
Trigger: GCTCAGAATCCGTGAGGTGCATTCTCTCATTCTAGC...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472026.5
CDS-3UTR GCA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTCTGCGATGTCGCTGGTaGCTTGCTAGAATGAGAGAA +
Preference number: 4 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFLRCRW*LARMRE
Trigger: TTCTCTCATTCTAGCAAGGCACCAGCGACATCGCAG...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472026.5
CDS-3UTR CCA 90 bp AAGTGGACTATTAAGGACTATAGTGTAGGTCATCGTTCTCAGCTGATCACCTCCTCCTGTCTTTATAGGTaGAACTTGAAATCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: KWTIKDYSVGHRSQLITSSCLYR*NLKSKS
Trigger: GCTTTTGGATTTCAAGTTCCACCTATAAAGACAGGA...GGAGGTGATCAGCTGAGAACGATGACCTACACTATAGTCCTTAATAGTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR CCA 90 bp GATAATTTTTCATCTCTCTCCCCAGAGTCATCCAAGCTGCTTCTTCCTGGACTTTCCTGTCTTTATAGGTaGAACTTGAAATCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: DNFSSLSPESSKLLLPGLSCLYR*NLKSKS
Trigger: GCTTTTGGATTTCAAGTTCCACCTATAAAGACAGGA...AAGTCCAGGAAGAAGCAGCTTGGATGACTCTGGGGAGAGAGATGAAAAATTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR CCA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTTCTTCCTGGACTTCTTaGCTGCACATCCTCAATCGA +
Preference number: 4 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGSSWTS*LHILNR
Trigger: TCGATTGAGGATGTGCAGCCAAGAAGTCCAGGAAGA...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CCA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTCAAGCTGCTTCTTCCTaGACTTCTTGGCTGCACATC +
Preference number: 4 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFQAASS*TSWLHI
Trigger: GATGTGCAGCCAAGAAGTCCAGGAAGAAGCAGCTTG...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CCA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGGTGTCTGCTTTTCAGTaGCAGCAGTGCATTTTCCAG +
Preference number: 4 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRVSAFQ*QQCIFQ
Trigger: CTGGAAAATGCACTGCTGCCACTGAAAAGCAGACAC...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CCA 90 bp GTACTTCTGAATCTACCAAATAAAATCGTGCTTCCCGACTTTCTTTATACAGTGGTGTCTGCTTTTCAGTaGCAGCAGTGCATTTTCCAG +
Preference number: 4 (lower is better)
Translates to: VLLNLPNKIVLPDFLYTVVSAFQ*QQCIFQ
Trigger: CTGGAAAATGCACTGCTGCCACTGAAAAGCAGACAC...CACTGTATAAAGAAAGTCGGGAAGCACGATTTTATTTGGTAGATTCAGAAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR CCA 90 bp AAACAAACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCATTCCAGGGTCTTCAATaGCCTGATTTAATACAGATT +
Preference number: 4 (lower is better)
Translates to: KQTQVGSLLPLGMLRWNSFQGLQ*PDLIQI
Trigger: AATCTGTATTAAATCAGGCCATTGAAGACCCTGGAA...TGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTGTTCAAGCATCACTATaGAGTCTCGGAGCACTCCCT +
Preference number: 4 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFVQASL*SLGALP
Trigger: AGGGAGTGCTCCGAGACTCCATAGTGATGCTTGAAC...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CCA 90 bp CTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCAGACTTCACTGTAGAAACAAAAGCGACCTATTaGACATGTACGGATTCTGTG +
Preference number: 4 (lower is better)
Translates to: LLDMYGFCANKASDFTVETKATY*TCTDSV
Trigger: CACAGAATCCGTACATGTCCAATAGGTCGCTTTTGT...TTCTACAGTGAAGTCTGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp CCCTCTAACGGAGTCAATACTTTCATTCTCTACAGGCATCTCAAAAATGACTATAATGCCATGTGGCTTTaGGGACTCTGGAGAAAAATG +
Preference number: 4 (lower is better)
Translates to: PSNGVNTFILYRHLKNDYNAMWL*GLWRKM
Trigger: CATTTTTCTCCAGAGTCCCCAAAGCCACATGGCATT...ATAGTCATTTTTGAGATGCCTGTAGAGAATGAAAGTATTGACTCCGTTAGAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR TCA 90 bp CTTGCATCTGAGTTAAAACTTGATAGTCAGTACACTTGTACTGGGACATACGTGTATCAGGTAGATGTGTaGACTGTCTTCTGTATTCCT +
Preference number: 4 (lower is better)
Translates to: LASELKLDSQYTCTGTYVYQVDV*TVFCIP
Trigger: AGGAATACAGAAGACAGTTCACACATCTACCTGATA...CACGTATGTCCCAGTACAAGTGTACTGACTATCAAGTTTTAACTCAGATGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358160.9
CDS-3UTR TCA 90 bp TCTCAGGAACATTTTCTTCATCAACAGAATCTGAAGTGCTGCTTTTGTCCAGAGTATCAGGTAGATGTGTaGACTGTCTTCTGTATTCCT +
Preference number: 4 (lower is better)
Translates to: SQEHFLHQQNLKCCFCPEYQVDV*TVFCIP
Trigger: AGGAATACAGAAGACAGTTCACACATCTACCTGATA...CTCTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAAGAAAATGTTCCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472384.5
ENST00000484714.2
CDS-3UTR TCA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATCCTCAATCGACAGTaGCAAGTTTTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGILNRQ*QVFHLL
Trigger: GAGGAGATGGAAAACTTGTCACTGTCGATTGAGGAT...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR TCA 90 bp TTCTCATTTTGGGACTCCTCTTTGCCTAATCCTCCTTTTGATGAATTTCCATCGTTTCTGCATAAAGCGTaGACTGGTAAAGAGCAATTC +
Preference number: 4 (lower is better)
Translates to: FSFWDSSLPNPPFDEFPSFLHKA*TGKEQF
Trigger: GAATTGCTCTTTACCAGTTCACGCTTTATGCAGAAA...CGATGGAAATTCATCAAAAGGAGGATTAGGCAAAGAGGAGTCCCAAAATGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR TCA 90 bp CTTGCATCTGAGTTAAAACTTGATAGTCAGTACACTTGTACTGGGACATACGTGAGATCAAACGTTTTCTaGAGCATAATGAGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LASELKLDSQYTCTGTYVRSNVF*SIMSEL
Trigger: GAGCTCACTCATTATGCTTCAGAAAACGTTTGATCT...CACGTATGTCCCAGTACAAGTGTACTGACTATCAAGTTTTAACTCAGATGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTTAAACCTAGCTCAGTaGCATAGTTCTGCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRLNLAQ*HSSAGA
Trigger: TGCTCCAGCAGAACTATGGCACTGAGCTAGGTTTAA...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR GCA 90 bp AGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCACAACAGAATCTGAAGTaGTGCTTTTGTCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: SYKSDLLDMYGFCANKASQQNLK*CFCPEK
Trigger: TTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTG...TGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp CTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCAGACTTCACTGTAGAAGAACTGGCAAATTTCTaGATAAAGCGTGAACTGGTA +
Preference number: 4 (lower is better)
Translates to: LLDMYGFCANKASDFTVEELANF*IKRELV
Trigger: TACCAGTTCACGCTTTATGCAGAAATTTGCCAGTTC...TTCTACAGTGAAGTCTGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTATCACCTCCAAGTTCTaGAGTCCAAGGGGTAGATAC +
Preference number: 4 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFITSKF*SPRGRY
Trigger: GTATCTACCCCTTGGACTGCAGAACTTGGAGGTGAT...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR GCA 90 bp TCTTCATCAACAGAATCTGAAGTGCTGCTTTTGTCCAGAGAAAGATATTCATTTATCACCTCCAAGTTCTaGAGTCCAAGGGGTAGATAC +
Preference number: 4 (lower is better)
Translates to: SSSTESEVLLLSRERYSFITSKF*SPRGRY
Trigger: GTATCTACCCCTTGGACTGCAGAACTTGGAGGTGAT...AAATGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR GCA 90 bp TCATTCTCTACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGTCTTTATACAGTGTCTaGTTTTCAGTGGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SFSTGISKMTIIMPCGFGSLYSV*FSVAAV
Trigger: CACTGCTGCCACTGAAAAGCAGACACTGTATAAAGA...CCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTAGAGAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp CTTGCATCTGAGTTAAAACTTGATAGTCAGTACACTTGTACTGGGACATACGTGAGTTCCAAGTATCTCTaGGGTTTTAGTCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: LASELKLDSQYTCTGTYVSSKYL*GFSPSD
Trigger: ATCTGAAGGACTAAAACCGCAGAGATACTTGGAACT...CACGTATGTCCCAGTACAAGTGTACTGACTATCAAGTTTTAACTCAGATGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp CCCTCTAACGGAGTCAATACTTTCATTCTCTACAGGCATCTCAAAAATGACTATCACTCTTTCCAAGGTTaGAGGTCAGAATGCAGAATT +
Preference number: 4 (lower is better)
Translates to: PSNGVNTFILYRHLKNDYHSFQG*RSECRI
Trigger: AATTCTGCATTCTGACCTGCAACCTTGGAAAGAGTG...ATAGTCATTTTTGAGATGCCTGTAGAGAATGAAAGTATTGACTCCGTTAGAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440446.2
CDS-3UTR GCA 90 bp TCTTCATCAACAGAATCTGAAGTGCTGCTTTTGTCCAGAGAAAGATATTCATTTTGTCTAGTCAGGCTCTaGTATCAGCCTCTCTGTATC +
Preference number: 4 (lower is better)
Translates to: SSSTESEVLLLSRERYSFCLVRL*YQPLCI
Trigger: GATACAGAGAGGCTGATAGCAGAGCCTGACTAGACA...AAATGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR CCA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTTCTTCCTGGACTTCTTaGCTGCACATCCTCAATCGA +
Preference number: 4 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFSSWTS*LHILNR
Trigger: TCGATTGAGGATGTGCAGCCAAGAAGTCCAGGAAGA...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CCA 90 bp GACTTTAACAGAGAAATCTTCAAGTTTATAATCCACTCATTCTTGCTTACAGCCGTGTCTGCTTTTCAGTaGCAGCAGTGCATTTTCCAG +
Preference number: 4 (lower is better)
Translates to: DFNREIFKFIIHSFLLTAVSAFQ*QQCIFQ
Trigger: CTGGAAAATGCACTGCTGCCACTGAAAAGCAGACAC...GGCTGTAAGCAAGAATGAGTGGATTATAAACTTGAAGATTTCTCTGTTAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp CCCTCTAACGGAGTCAATACTTTCATTCTCTACAGGCATCTCAAAAATGACTATTATAATAATGCCATGTaGCTTTGGGGACTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PSNGVNTFILYRHLKNDYYNNAM*LWGLWR
Trigger: TCTCCAGAGTCCCCAAAGCCACATGGCATTATTATA...ATAGTCATTTTTGAGATGCCTGTAGAGAATGAAAGTATTGACTCCGTTAGAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGCTAGGTATGCTTCGTTaGAATTCACCCAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRLGMLR*NSPRET
Trigger: GGTTTCTCTGGGTGAATTCCAACGAAGCATACCTAG...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp TTGGTCTTATCTCAGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCGTCAGAATGCAGAATTaGAAGTTATACCTCACTCTA +
Preference number: 4 (lower is better)
Translates to: LVLSQLQKRPIGHVRILCVRMQN*KLYLTL
Trigger: TAGAGTGAGGTATAACTTCCAATTCTGCATTCTGAC...GCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACTGAGATAAGACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440446.2
CDS-3UTR TCA 90 bp GACTTTAACAGAGAAATCTTCAAGTTTATAATCCACTCATTCTTGCTTACAGCCATCCTCAATCGACAGTaGCAAGTTTTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: DFNREIFKFIIHSFLLTAILNRQ*QVFHLL
Trigger: GAGGAGATGGAAAACTTGTCACTGTCGATTGAGGAT...GGCTGTAAGCAAGAATGAGTGGATTATAAACTTGAAGATTTCTCTGTTAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR TCA 90 bp TCTTCATCAACAGAATCTGAAGTGCTGCTTTTGTCCAGAGAAAGATATTCATTTATCCTCAATCGACAGTaGCAAGTTTTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSSTESEVLLLSRERYSFILNRQ*QVFHLL
Trigger: GAGGAGATGGAAAACTTGTCACTGTCGATTGAGGAT...AAATGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472384.5
ENST00000484714.2
CDS-3UTR TCA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTTCATCAACAGAATCTaGAGTGCTGCTTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRFINRI*SAAFVQ
Trigger: CTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAA...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR TCA 90 bp TCATTCTCTACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGTTTCTGCATAAAGCGTaGACTGGTAAAGAGCAATTC +
Preference number: 4 (lower is better)
Translates to: SFSTGISKMTIIMPCGFGFLHKA*TGKEQF
Trigger: GAATTGCTCTTTACCAGTTCACGCTTTATGCAGAAA...CCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTAGAGAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR TCA 90 bp CTGAATCTACCAAATAAAATCGTGCTTCCCGACTTTCTTTATACAGTGTCTGCTTTTCTGCATAAAGCGTaGACTGGTAAAGAGCAATTC +
Preference number: 4 (lower is better)
Translates to: LNLPNKIVLPDFLYTVSAFLHKA*TGKEQF
Trigger: GAATTGCTCTTTACCAGTTCACGCTTTATGCAGAAA...AGCAGACACTGTATAAAGAAAGTCGGGAAGCACGATTTTATTTGGTAGATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR TCA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGGTTTTGAAGATCGGATaGTACAGTATCTGTTCACGG +
Preference number: 4 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRVLKIG*YSICSR
Trigger: CCGTGAACAGATACTGTATCATCCGATCTTCAAAAC...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR TCA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTGTTGGTATTCTAAGTaGGGAGGCAAGATAATCCCA +
Preference number: 4 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRCWYSK*GGKIIP
Trigger: TGGGATTATCTTGCCTCCTCACTTAGAATACCAACA...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp GACTTTAACAGAGAAATCTTCAAGTTTATAATCCACTCATTCTTGCTTACAGCCTTAAACCTAGCTCAGTaGCATAGTTCTGCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: DFNREIFKFIIHSFLLTALNLAQ*HSSAGA
Trigger: TGCTCCAGCAGAACTATGGCACTGAGCTAGGTTTAA...GGCTGTAAGCAAGAATGAGTGGATTATAAACTTGAAGATTTCTCTGTTAAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp TCTTCATCAACAGAATCTGAAGTGCTGCTTTTGTCCAGAGAAAGATATTCATTTTTAAACCTAGCTCAGTaGCATAGTTCTGCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SSSTESEVLLLSRERYSFLNLAQ*HSSAGA
Trigger: TGCTCCAGCAGAACTATGGCACTGAGCTAGGTTTAA...AAATGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472384.5
ENST00000484714.2
CDS-3UTR GCA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTTTTGGGACTCCTCTTTaGCTAATCCTCCTTTTGATG +
Preference number: 4 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGFGTPL*LILLLM
Trigger: CATCAAAAGGAGGATTAGGCAAAGAGGAGTCCCAAA...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR GCA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTCTTTATACAGTGTCTaGTTTTCAGTGGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRSLYSV*FSVAAV
Trigger: CACTGCTGCCACTGAAAAGCAGACACTGTATAAAGA...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR GCA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTTTTAGGAACTGTTTCTaGTGTTCGGTTGAAGGTTCG +
Preference number: 4 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGFRNCF*CSVEGS
Trigger: CGAACCTTCAACCGAACAGCAGAAACAGTTCCTAAA...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CCA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATCTGGATAGCGTTTaGGATGAGTCGAGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRYLDSV*DESSSF
Trigger: AAAACTGCTCGACTCATCCCAAACGCTATCCAGATA...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358160.9
CDS-3UTR CCA 90 bp AGGGGACATCATGTGTCAGTACTTCTGAATCTACCAAATAAAATCGTGCTTCCCTGTATTTCAAATCTGTaGAAACTCTTAGCCTGCATT +
Preference number: 4 (lower is better)
Translates to: RGHHVSVLLNLPNKIVLPCISNL*KLLACI
Trigger: AATGCAGGCTAAGAGTTTCCACAGATTTGAAATACA...GGGAAGCACGATTTTATTTGGTAGATTCAGAAGTACTGACACATGATGTCCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR CCA 90 bp TACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGGACTCTGGAATGAGCCACTTGTATaGAGACACATATGCATAAAA +
Preference number: 4 (lower is better)
Translates to: YRHLKNDYNNAMWLWGLWNEPLV*RHICIK
Trigger: TTTTATGCATATGTGTCTCCATACAAGTGGCTCATT...CCAGAGTCCCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp CTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCAGACTTCACTGTAGAATGGCTTTGGGGACTCTaGAGAAAAATGAAACATTTA +
Preference number: 4 (lower is better)
Translates to: LLDMYGFCANKASDFTVEWLWGL*RKMKHL
Trigger: TAAATGTTTCATTTTTCTCCAGAGTCCCCAAAGCCA...TTCTACAGTGAAGTCTGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATAATAATGCCATGTaGCTTTGGGGACTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRYNNAM*LWGLWR
Trigger: TCTCCAGAGTCCCCAAAGCCACATGGCATTATTATA...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR TCA 90 bp GACTTTAACAGAGAAATCTTCAAGTTTATAATCCACTCATTCTTGCTTACAGCCTTCATCAACAGAATCTaGAGTGCTGCTTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: DFNREIFKFIIHSFLLTAFINRI*SAAFVQ
Trigger: CTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAA...GGCTGTAAGCAAGAATGAGTGGATTATAAACTTGAAGATTTCTCTGTTAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR TCA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTTTCTGCATAAAGCGTaGACTGGTAAAGAGCAATTC +
Preference number: 4 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRFLHKA*TGKEQF
Trigger: GAATTGCTCTTTACCAGTTCACGCTTTATGCAGAAA...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR TCA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTTTTCTGCATAAAGCGTaGACTGGTAAAGAGCAATTC +
Preference number: 4 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGFLHKA*TGKEQF
Trigger: GAATTGCTCTTTACCAGTTCACGCTTTATGCAGAAA...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR TCA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTGTTTTGAAGATCGGATaGTACAGTATCTGTTCACGG +
Preference number: 4 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFVLKIG*YSICSR
Trigger: CCGTGAACAGATACTGTATCATCCGATCTTCAAAAC...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR TCA 90 bp TCTTCATCAACAGAATCTGAAGTGCTGCTTTTGTCCAGAGAAAGATATTCATTTGTTTTGAAGATCGGATaGTACAGTATCTGTTCACGG +
Preference number: 4 (lower is better)
Translates to: SSSTESEVLLLSRERYSFVLKIG*YSICSR
Trigger: CCGTGAACAGATACTGTATCATCCGATCTTCAAAAC...AAATGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR TCA 90 bp ATTCTTGCTTACAGCCAGACACTACATAAATCCTTACCAAAACAAAACAAACCCGGGTCTTCAATGGCCTaGTTTAATACAGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: ILAYSQTLHKSLPKQNKPGSSMA*FNTDSS
Trigger: TGAAGAATCTGTATTAAATCAGGCCATTGAAGACCC...GGGTTTGTTTTGTTTTGGTAAGGATTTATGTAGTGTCTGGCTGTAAGCAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR TCA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTGGGTCTTCAATGGCCTaGTTTAATACAGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGGSSMA*FNTDSS
Trigger: TGAAGAATCTGTATTAAATCAGGCCATTGAAGACCC...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR TCA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGAGATCAAACGTTTTCTaGAGCATAATGAGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRRSNVF*SIMSEL
Trigger: GAGCTCACTCATTATGCTTCAGAAAACGTTTGATCT...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR GCA 90 bp TCTTCATCAACAGAATCTGAAGTGCTGCTTTTGTCCAGAGAAAGATATTCATTTAGCACAAGCATAATCTaGTATCAGCCTCTCTGTATC +
Preference number: 4 (lower is better)
Translates to: SSSTESEVLLLSRERYSFSTSII*YQPLCI
Trigger: GATACAGAGAGGCTGATAGCAGATTATGCTTGTGCT...AAATGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR GCA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTGAACTGGCAAATTTCTaGATAAAGCGTGAACTGGTA +
Preference number: 4 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGELANF*IKRELV
Trigger: TACCAGTTCACGCTTTATGCAGAAATTTGCCAGTTC...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR GCA 90 bp GTACTTCTGAATCTACCAAATAAAATCGTGCTTCCCGACTTTCTTTATACAGTGGAACTGGCAAATTTCTaGATAAAGCGTGAACTGGTA +
Preference number: 4 (lower is better)
Translates to: VLLNLPNKIVLPDFLYTVELANF*IKRELV
Trigger: TACCAGTTCACGCTTTATGCAGAAATTTGCCAGTTC...CACTGTATAAAGAAAGTCGGGAAGCACGATTTTATTTGGTAGATTCAGAAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR GCA 90 bp TCTTCATCAACAGAATCTGAAGTGCTGCTTTTGTCCAGAGAAAGATATTCATTTTCTTTATACAGTGTCTaGTTTTCAGTGGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SSSTESEVLLLSRERYSFSLYSV*FSVAAV
Trigger: CACTGCTGCCACTGAAAAGCAGACACTGTATAAAGA...AAATGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR GCA 90 bp CCCTCTAACGGAGTCAATACTTTCATTCTCTACAGGCATCTCAAAAATGACTATTGGAAACTCTTAGCCTaGATTTCTGTTTTGAAGATC +
Preference number: 4 (lower is better)
Translates to: PSNGVNTFILYRHLKNDYWKLLA*ISVLKI
Trigger: GATCTTCAAAACAGAAATGCAGGCTAAGAGTTTCCA...ATAGTCATTTTTGAGATGCCTGTAGAGAATGAAAGTATTGACTCCGTTAGAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp CTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCAGACTTCACTGTAGAAAGCTTTCAACAGCCATaGCAGTCTTATTCTTATTTA +
Preference number: 4 (lower is better)
Translates to: LLDMYGFCANKASDFTVESFQQP*QSYSYL
Trigger: TAAATAAGAATAAGACTGGCATGGCTGTTGAAAGCT...TTCTACAGTGAAGTCTGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp CTTGCATCTGAGTTAAAACTTGATAGTCAGTACACTTGTACTGGGACATACGTGCCTGGAAATGTTATATaGCTGAAAACAGAACCTTTA +
Preference number: 4 (lower is better)
Translates to: LASELKLDSQYTCTGTYVPGNVI*LKTEPL
Trigger: TAAAGGTTCTGTTTTCAGGCATATAACATTTCCAGG...CACGTATGTCCCAGTACAAGTGTACTGACTATCAAGTTTTAACTCAGATGCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp GACTTTAACAGAGAAATCTTCAAGTTTATAATCCACTCATTCTTGCTTACAGCCGGTTGCAGGTCAGAATaGAGAATTGGAAGTTATACC +
Preference number: 4 (lower is better)
Translates to: DFNREIFKFIIHSFLLTAGCRSE*RIGSYT
Trigger: GGTATAACTTCCAATTCTGCATTCTGACCTGCAACC...GGCTGTAAGCAAGAATGAGTGGATTATAAACTTGAAGATTTCTCTGTTAAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440446.2
CDS-3UTR GCA 90 bp GACTTTAACAGAGAAATCTTCAAGTTTATAATCCACTCATTCTTGCTTACAGCCATGTTGCCATCTCTATaGACAGCAGAGCTCCAAATA +
Preference number: 4 (lower is better)
Translates to: DFNREIFKFIIHSFLLTAMLPSL*TAELQI
Trigger: TATTTGGAGCTCTGCTGTGCATAGAGATGGCAACAT...GGCTGTAAGCAAGAATGAGTGGATTATAAACTTGAAGATTTCTCTGTTAAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440446.2
CDS-3UTR CCA 90 bp ATTCTTGCTTACAGCCAGACACTACATAAATCCTTACCAAAACAAAACAAACCCATTCTCTTCCACAGTTaGACTAGGATTTTCCTCTAC +
Preference number: 4 (lower is better)
Translates to: ILAYSQTLHKSLPKQNKPILFHS*TRIFLY
Trigger: GTAGAGGAAAATCCTAGTCCAACTGTGGAAGAGAAT...GGGTTTGTTTTGTTTTGGTAAGGATTTATGTAGTGTCTGGCTGTAAGCAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358160.9
CDS-3UTR CCA 90 bp CCCTCTAACGGAGTCAATACTTTCATTCTCTACAGGCATCTCAAAAATGACTATTCCTGTCTTTATAGGTaGAACTTGAAATCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: PSNGVNTFILYRHLKNDYSCLYR*NLKSKS
Trigger: GCTTTTGGATTTCAAGTTCCACCTATAAAGACAGGA...ATAGTCATTTTTGAGATGCCTGTAGAGAATGAAAGTATTGACTCCGTTAGAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358160.9
CDS-3UTR CCA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTCTTTCTGTAACTATCTaGATAGCGTTTGGGATGAGT +
Preference number: 4 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGLSVTI*IAFGMS
Trigger: ACTCATCCCAAACGCTATCCAGATAGTTACAGAAAG...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358160.9
CDS-3UTR CCA 90 bp CCCTCTAACGGAGTCAATACTTTCATTCTCTACAGGCATCTCAAAAATGACTATGTAAGAGACTCTTTTTaGTCTGTTTCTCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: PSNGVNTFILYRHLKNDYVRDSF*SVSHFG
Trigger: CCCAAAATGAGAAACAGACCAAAAAGAGTCTCTTAC...ATAGTCATTTTTGAGATGCCTGTAGAGAATGAAAGTATTGACTCCGTTAGAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp AAGTCCAGTGACTTTGATGGCACTCTAGTTAACTTCTTTTCCAAAGTTGGTAAGGTAAGAGACTCTTTTTaGTCTGTTTCTCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: KSSDFDGTLVNFFSKVGKVRDSF*SVSHFG
Trigger: CCCAAAATGAGAAACAGACCAAAAAGAGTCTCTTAC...CTTACCAACTTTGGAAAAGAAGTTAACTAGAGTGCCATCAAAGTCACTGGACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR CCA 90 bp CTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCAGACTTCACTGTAGAATGTATTTCAAATCTGTaGAAACTCTTAGCCTGCATT +
Preference number: 4 (lower is better)
Translates to: LLDMYGFCANKASDFTVECISNL*KLLACI
Trigger: AATGCAGGCTAAGAGTTTCCACAGATTTGAAATACA...TTCTACAGTGAAGTCTGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTTTTGACAAGGCCCCATaGCTGTTTTCTGTATTTCAA +
Preference number: 4 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGFDKAP*LFSVFQ
Trigger: TTGAAATACAGAAAACAGCCATGGGGCCTTGTCAAA...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CCA 90 bp GACTTCACTGTAGAAATGAGACCATACCACTCAATTCAGGGTGTGTCATTTTCTTACAGTACACAAACCTaGAAATGTTATATGCCTGAA +
Preference number: 4 (lower is better)
Translates to: DFTVEMRPYHSIQGVSFSYSTQT*KCYMPE
Trigger: TTCAGGCATATAACATTTCCAGGTTTGTGTACTGTA...AGAAAATGACACACCCTGAATTGAGTGGTATGGTCTCATTTCTACAGTGAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp TCATTCTCTACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGTGGCTTTGGGGACTCTaGAGAAAAATGAAACATTTA +
Preference number: 4 (lower is better)
Translates to: SFSTGISKMTIIMPCGFGWLWGL*RKMKHL
Trigger: TAAATGTTTCATTTTTCTCCAGAGTCCCCAAAGCCA...CCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTAGAGAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR TCA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTTTTCAATTAAAGATTTaGCAAGGCCCCATGGCTGTT +
Preference number: 4 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFFQLKI*QGPMAV
Trigger: AACAGCCATGGGGCCTTGTCAAATCTTTAATTGAAA...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR GCA 90 bp GACTTTAACAGAGAAATCTTCAAGTTTATAATCCACTCATTCTTGCTTACAGCCCAACAGAATCTGAAGTaGTGCTTTTGTCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: DFNREIFKFIIHSFLLTAQQNLK*CFCPEK
Trigger: TTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTG...GGCTGTAAGCAAGAATGAGTGGATTATAAACTTGAAGATTTCTCTGTTAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTCAACAGAATCTGAAGTaGTGCTTTTGTCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFQQNLK*CFCPEK
Trigger: TTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTG...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR GCA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTGGAAACTCTTAGCCTaGATTTCTGTTTTGAAGATC +
Preference number: 4 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRWKLLA*ISVLKI
Trigger: GATCTTCAAAACAGAAATGCAGGCTAAGAGTTTCCA...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CCA 90 bp TCAGTACTTCTGAATCTACCAAATAAAATCGTGCTTCCCGACTTTCTTTATACAATTCTCTTCCACAGTTaGACTAGGATTTTCCTCTAC +
Preference number: 4 (lower is better)
Translates to: SVLLNLPNKIVLPDFLYTILFHS*TRIFLY
Trigger: GTAGAGGAAAATCCTAGTCCAACTGTGGAAGAGAAT...TGTATAAAGAAAGTCGGGAAGCACGATTTTATTTGGTAGATTCAGAAGTACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR CCA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGGTAAGAGACTCTTTTTaGTCTGTTTCTCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRVRDSF*SVSHFG
Trigger: CCCAAAATGAGAAACAGACCAAAAAGAGTCTCTTAC...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CCA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTTTCCAGGGTCTTCAATaGCCTGATTTAATACAGATT +
Preference number: 4 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGFQGLQ*PDLIQI
Trigger: AATCTGTATTAAATCAGGCCATTGAAGACCCTGGAA...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CCA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTCATAAAGATACAGCATaGCAGAAGACCCTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFHKDTA*QKTLSD
Trigger: ATCAGAAAGGGTCTTCTGCCATGCTGTATCTTTATG...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR GCA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTTGGAAACTCTTAGCCTaGATTTCTGTTTTGAAGATC +
Preference number: 4 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFWKLLA*ISVLKI
Trigger: GATCTTCAAAACAGAAATGCAGGCTAAGAGTTTCCA...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR GCA 90 bp TCCAGAGAAAGATATTCATTTTTATTCAAGTCCAGTGACTTTGATGGCACTCTATGGAAACTCTTAGCCTaGATTTCTGTTTTGAAGATC +
Preference number: 4 (lower is better)
Translates to: SRERYSFLFKSSDFDGTLWKLLA*ISVLKI
Trigger: GATCTTCAAAACAGAAATGCAGGCTAAGAGTTTCCA...TAGAGTGCCATCAAAGTCACTGGACTTGAATAAAAATGAATATCTTTCTCTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR GCA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTAGCTTTCAACAGCCATaGCAGTCTTATTCTTATTTA +
Preference number: 4 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGSFQQP*QSYSYL
Trigger: TAAATAAGAATAAGACTGGCATGGCTGTTGAAAGCT...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR GCA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTCCTGGAAATGTTATATaGCTGAAAACAGAACCTTTA +
Preference number: 4 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGPGNVI*LKTEPL
Trigger: TAAAGGTTCTGTTTTCAGGCATATAACATTTCCAGG...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTGTAAGAGACTCTTTTTaGTCTGTTTCTCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFVRDSF*SVSHFG
Trigger: CCCAAAATGAGAAACAGACCAAAAAGAGTCTCTTAC...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CCA 90 bp CCAAGGGGTAGATACTACATCTATTATATTTCTAGAACTGGCAAATTTCTGCATGTAAGAGACTCTTTTTaGTCTGTTTCTCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: PRGRYYIYYISRTGKFLHVRDSF*SVSHFG
Trigger: CCCAAAATGAGAAACAGACCAAAAAGAGTCTCTTAC...ATGCAGAAATTTGCCAGTTCTAGAAATATAATAGATGTAGTATCTACCCCTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR CCA 90 bp ATTCTTGCTTACAGCCAGACACTACATAAATCCTTACCAAAACAAAACAAACCCTGTATTTCAAATCTGTaGAAACTCTTAGCCTGCATT +
Preference number: 4 (lower is better)
Translates to: ILAYSQTLHKSLPKQNKPCISNL*KLLACI
Trigger: AATGCAGGCTAAGAGTTTCCACAGATTTGAAATACA...GGGTTTGTTTTGTTTTGGTAAGGATTTATGTAGTGTCTGGCTGTAAGCAAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTTGTATTTCAAATCTGTaGAAACTCTTAGCCTGCATT +
Preference number: 4 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGCISNL*KLLACI
Trigger: AATGCAGGCTAAGAGTTTCCACAGATTTGAAATACA...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CCA 90 bp ATTCTTGCTTACAGCCAGACACTACATAAATCCTTACCAAAACAAAACAAACCCTACAGTACACAAACCTaGAAATGTTATATGCCTGAA +
Preference number: 4 (lower is better)
Translates to: ILAYSQTLHKSLPKQNKPYSTQT*KCYMPE
Trigger: TTCAGGCATATAACATTTCCAGGTTTGTGTACTGTA...GGGTTTGTTTTGTTTTGGTAAGGATTTATGTAGTGTCTGGCTGTAAGCAAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CCA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGAATGAGCCACTTGTATaGAGACACATATGCATAAAA +
Preference number: 4 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRNEPLV*RHICIK
Trigger: TTTTATGCATATGTGTCTCCATACAAGTGGCTCATT...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
3UTR CAA 72 bp AACAGAGAAATCTTCAAGTTTATAATCCACTCATTCTaGCTTACAGCCAGACACTACATAAATCCTTACCAA +
Preference number: 4 (lower is better)
Translates to: NREIFKFIIHSF*LTARHYINPYQ
Trigger: TTGGTAAGGATTTATGTAGTGTCTGGCTGTAAGCAAGAATGAGTGGATTATAAACTTGAAGATTTCTCTGTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS GCA 90 bp GCGCGCACCGCACCGCACCGCCCCGCGCCCACCTCCAGCGCGCGCTaGGAGTTACAGGCTCCGCGCGCCTCCTCCGCCGGCCCTCCGAGT +
Preference number: 5 (lower is better)
Translates to: ARTAPHRPAPTSSAR*ELQAPRASSAGPPS
Trigger: ACTCGGAGGGCCGGCGGAGGAGGCGCGCGGAGCCTGTAACTCGCAGCGCGCGCTGGAGGTGGGCGCGGGGCGGTGCGGTGCGGTGCGCGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358160.9
CDS CCA 90 bp TCCTGTAAGTCGGTGGCAAGGCTTGAATCCCCTTCATTCATCACATaGCCGGGCACCTGGTACTGGCTATTGGTTTGGGACCTCAATTCC +
Preference number: 5 (lower is better)
Translates to: SCKSVARLESPSFIT*PGTWYWLLVWDLNS
Trigger: GGAATTGAGGTCCCAAACCAATAGCCAGTACCAGGTGCCCGGCCATGTGATGAATGAAGGGGATTCAAGCCTTGCCACCGACTTACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479212.5
CDS CCA 90 bp GTGGCAAGGCTTGAATCCCCTTCATTCATCACATGGCCGGGCACCTaGTACTGGCTATTGGTTTGGGACCTCAATTCCTCTCCATATGGA +
Preference number: 5 (lower is better)
Translates to: VARLESPSFITWPGT*YWLLVWDLNSSPYG
Trigger: TCCATATGGAGAGGAATTGAGGTCCCAAACCAATAGCCAGTACCAGGTGCCCGGCCATGTGATGAATGAAGGGGATTCAAGCCTTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479212.5
CDS CCA 90 bp AGGCTTGAATCCCCTTCATTCATCACATGGCCGGGCACCTGGTACTaGCTATTGGTTTGGGACCTCAATTCCTCTCCATATGGACATCTT +
Preference number: 5 (lower is better)
Translates to: RLESPSFITWPGTWY*LLVWDLNSSPYGHL
Trigger: AAGATGTCCATATGGAGAGGAATTGAGGTCCCAAACCAATAGCCAGTACCAGGTGCCCGGCCATGTGATGAATGAAGGGGATTCAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479212.5
CDS-3UTR CAA 90 bp TTTTCATCTCTCTCCCCAGAGTCATCCAAGCTGCTTCTTCCTGGACTTCTTGGCAGTCGGTGGCAAGGCTaGAATCCCCTTCATTCATCA +
Preference number: 5 (lower is better)
Translates to: FSSLSPESSKLLLPGLLGSRWQG*NPLHSS
Trigger: TGATGAATGAAGGGGATTCAAGCCTTGCCACCGACT...GCCAAGAAGTCCAGGAAGAAGCAGCTTGGATGACTCTGGGGAGAGAGATGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS CCA 90 bp GGACATTCAATACAGTATATAACCAAGCATAGTCTGCGATGTCGCTaGTGCCTTGCTAGAATGAGAGAATGCACCTCACGGATTCTGAGC +
Preference number: 5 (lower is better)
Translates to: GHSIQYITKHSLRCR*CLARMRECTSRILS
Trigger: GCTCAGAATCCGTGAGGTGCATTCTCTCATTCTAGCAAGGCACCAGCGACATCGCAGACTATGCTTGGTTATATACTGTATTGAATGTCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472026.5
CDS GCA 90 bp CATTCAATACAGTATATAACCAAGCATAGTCTGCGATGTCGCTGGTaGCTTGCTAGAATGAGAGAATGCACCTCACGGATTCTGAGCACT +
Preference number: 5 (lower is better)
Translates to: HSIQYITKHSLRCRW*LARMRECTSRILST
Trigger: AGTGCTCAGAATCCGTGAGGTGCATTCTCTCATTCTAGCAAGGCACCAGCGACATCGCAGACTATGCTTGGTTATATACTGTATTGAATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472026.5
CDS-3UTR CAA 90 bp ACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCACCCAGATCTGAAGTGCTGCTTTaGTCCAGAGAAAGATATTCA +
Preference number: 5 (lower is better)
Translates to: TQVGSLLPLGMLRWNSPRSEVLL*SRERYS
Trigger: TGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGA...TCTGGGTGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp AGGGGACATCATGTGTCAGTACTTCTGAATCTACCAAATAAAATCGTGCTTCCCGGTCTGTTTCTCATTTaGGGACTCCTTGGCTGCACA +
Preference number: 5 (lower is better)
Translates to: RGHHVSVLLNLPNKIVLPGLFLI*GLLGCT
Trigger: TGTGCAGCCAAGGAGTCCCAAAATGAGAAACAGACC...GGGAAGCACGATTTTATTTGGTAGATTCAGAAGTACTGACACATGATGTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS CCA 90 bp TTTTACTTCCAGCCAGTAAATGCAGTGTTTCTTGGCTATGGTGGGTaGCCTCCAGTATTCTGGAATTCCCTTTCTTCTTCTCACTTCAGA +
Preference number: 5 (lower is better)
Translates to: FYFQPVNAVFLGYGG*PPVFWNSLSSSHFR
Trigger: TCTGAAGTGAGAAGAAGAAAGGGAATTCCAGAATACTGGAGGCCACCCACCATAGCCAAGAAACACTGCATTTACTGGCTGGAAGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462838.5
CDS-3UTR CAA 90 bp AGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCAGTTCTGCTGGAGCAGTaGCCAGAATTCCTGTCTAGT +
Preference number: 5 (lower is better)
Translates to: SYKSDLLDMYGFCANKASVLLEQ*PEFLSS
Trigger: ACTAGACAGGAATTCTGGCAACTGCTCCAGCAGAAC...TGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp CTTGCATCTGAGTTAAAACTTGATAGTCAGTACACTTGTACTGGGACATACGTGTTCTTCCTGGACTTCTaGGCTGCACATCCTCAATCG +
Preference number: 5 (lower is better)
Translates to: LASELKLDSQYTCTGTYVFFLDF*AAHPQS
Trigger: CGATTGAGGATGTGCAGCCAAGAAGTCCAGGAAGAA...CACGTATGTCCCAGTACAAGTGTACTGACTATCAAGTTTTAACTCAGATGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp AGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCATTCTTCCTGGACTTCTaGGCTGCACATCCTCAATCG +
Preference number: 5 (lower is better)
Translates to: SYKSDLLDMYGFCANKASFFLDF*AAHPQS
Trigger: CGATTGAGGATGTGCAGCCAAGAAGTCCAGGAAGAA...TGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp TCTCAGGAACATTTTCTTCATCAACAGAATCTGAAGTGCTGCTTTTGTCCAGAGTTCTTCCTGGACTTCTaGGCTGCACATCCTCAATCG +
Preference number: 5 (lower is better)
Translates to: SQEHFLHQQNLKCCFCPEFFLDF*AAHPQS
Trigger: CGATTGAGGATGTGCAGCCAAGAAGTCCAGGAAGAA...CTCTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAAGAAAATGTTCCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR CAA 90 bp CTTGCATCTGAGTTAAAACTTGATAGTCAGTACACTTGTACTGGGACATACGTGCCTGTAATATCCCCTTaGGCACCTAAGCCCACATCT +
Preference number: 5 (lower is better)
Translates to: LASELKLDSQYTCTGTYVPVISP*APKPTS
Trigger: AGATGTGGGCTTAGGTGCCAAAGGGGATATTACAGG...CACGTATGTCCCAGTACAAGTGTACTGACTATCAAGTTTTAACTCAGATGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp GACTTCACTGTAGAAATGAGACCATACCACTCAATTCAGGGTGTGTCATTTTCTCCTGTAATATCCCCTTaGGCACCTAAGCCCACATCT +
Preference number: 5 (lower is better)
Translates to: DFTVEMRPYHSIQGVSFSPVISP*APKPTS
Trigger: AGATGTGGGCTTAGGTGCCAAAGGGGATATTACAGG...AGAAAATGACACACCCTGAATTGAGTGGTATGGTCTCATTTCTACAGTGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp ACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCACCCAGAATTTTAATGAGCCACTaGTATGGAGACACATATGCA +
Preference number: 5 (lower is better)
Translates to: TQVGSLLPLGMLRWNSPRILMSH*YGDTYA
Trigger: TGCATATGTGTCTCCATACAAGTGGCTCATTAAAAT...TCTGGGTGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp TCATTCTCTACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGAGTCGGTGGCAAGGCTaGAATCCCCTTCATTCATCA +
Preference number: 5 (lower is better)
Translates to: SFSTGISKMTIIMPCGFGSRWQG*NPLHSS
Trigger: TGATGAATGAAGGGGATTCAAGCCTTGCCACCGACT...CCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTAGAGAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358160.9
CDS-3UTR CAA 90 bp CTGAATCTACCAAATAAAATCGTGCTTCCCGACTTTCTTTATACAGTGTCTGCTAGTCGGTGGCAAGGCTaGAATCCCCTTCATTCATCA +
Preference number: 5 (lower is better)
Translates to: LNLPNKIVLPDFLYTVSASRWQG*NPLHSS
Trigger: TGATGAATGAAGGGGATTCAAGCCTTGCCACCGACT...AGCAGACACTGTATAAAGAAAGTCGGGAAGCACGATTTTATTTGGTAGATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR CAA 90 bp CCCTCTAACGGAGTCAATACTTTCATTCTCTACAGGCATCTCAAAAATGACTATGTTCTGCTGGAGCAGTaGCCAGAATTCCTGTCTAGT +
Preference number: 5 (lower is better)
Translates to: PSNGVNTFILYRHLKNDYVLLEQ*PEFLSS
Trigger: ACTAGACAGGAATTCTGGCAACTGCTCCAGCAGAAC...ATAGTCATTTTTGAGATGCCTGTAGAGAATGAAAGTATTGACTCCGTTAGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp CTAGAACTGGCAAATTTCTGCATAAAGCGTGAACTGGTAAAGAGCAATTCAAACGTTCTGCTGGAGCAGTaGCCAGAATTCCTGTCTAGT +
Preference number: 5 (lower is better)
Translates to: LELANFCIKRELVKSNSNVLLEQ*PEFLSS
Trigger: ACTAGACAGGAATTCTGGCAACTGCTCCAGCAGAAC...GTTTGAATTGCTCTTTACCAGTTCACGCTTTATGCAGAAATTTGCCAGTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472384.5
ENST00000484714.2
CDS-3UTR CAA 90 bp TCCTCTTTGCCTAATCCTCCTTTTGATGAATTTCCATCGAATGACTCTGTTTCTGTTCTGCTGGAGCAGTaGCCAGAATTCCTGTCTAGT +
Preference number: 5 (lower is better)
Translates to: SSLPNPPFDEFPSNDSVSVLLEQ*PEFLSS
Trigger: ACTAGACAGGAATTCTGGCAACTGCTCCAGCAGAAC...AGAAACAGAGTCATTCGATGGAAATTCATCAAAAGGAGGATTAGGCAAAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR CAA 90 bp AGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCTAACAAAGCATCACCTAGGTATGCTTCGTaGGAATTCACCCAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: SYKSDLLDMYGFCANKASPRYAS*EFTQRN
Trigger: GTTTCTCTGGGTGAATTCCAACGAAGCATACCTAGG...TGATGCTTTGTTAGCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp AAACAAACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCATCTGAAGTGCTGCTTTaGTCCAGAGAAAGATATTCA +
Preference number: 5 (lower is better)
Translates to: KQTQVGSLLPLGMLRWNSSEVLL*SRERYS
Trigger: TGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGA...TGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp TGTCTGCTTTTCAGTGGCAGCAGTGCATTTTCCAGTAAGTGGACTATTAAGGACTCTGAAGTGCTGCTTTaGTCCAGAGAAAGATATTCA +
Preference number: 5 (lower is better)
Translates to: CLLFSGSSAFSSKWTIKDSEVLL*SRERYS
Trigger: TGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGA...GTCCTTAATAGTCCACTTACTGGAAAATGCACTGCTGCCACTGAAAAGCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR CAA 90 bp GATAATTTTTCATCTCTCTCCCCAGAGTCATCCAAGCTGCTTCTTCCTGGACTTTCTGAAGTGCTGCTTTaGTCCAGAGAAAGATATTCA +
Preference number: 5 (lower is better)
Translates to: DNFSSLSPESSKLLLPGLSEVLL*SRERYS
Trigger: TGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGA...AAGTCCAGGAAGAAGCAGCTTGGATGACTCTGGGGAGAGAGATGAAAAATTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR CAA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGCCTGTAATATCCCCTTaGGCACCTAAGCCCACATCT +
Preference number: 5 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRPVISP*APKPTS
Trigger: AGATGTGGGCTTAGGTGCCAAAGGGGATATTACAGG...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CAA 90 bp TCATTCTCTACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGCCTAGGTATGCTTCGTaGGAATTCACCCAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: SFSTGISKMTIIMPCGFGPRYAS*EFTQRN
Trigger: GTTTCTCTGGGTGAATTCCAACGAAGCATACCTAGG...CCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTAGAGAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp TACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGGACTCTGGCTTTATAGGTGGAACTaGAAATCCAAAAGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: YRHLKNDYNNAMWLWGLWLYRWN*KSKSSS
Trigger: ACTGGAGCTTTTGGATTTCAAGTTCCACCTATAAAG...CCAGAGTCCCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358160.9
CDS-3UTR CAA 90 bp AGGGGACATCATGTGTCAGTACTTCTGAATCTACCAAATAAAATCGTGCTTCCCCTTTATAGGTGGAACTaGAAATCCAAAAGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: RGHHVSVLLNLPNKIVLPLYRWN*KSKSSS
Trigger: ACTGGAGCTTTTGGATTTCAAGTTCCACCTATAAAG...GGGAAGCACGATTTTATTTGGTAGATTCAGAAGTACTGACACATGATGTCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR CAA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTGTTCTGCTGGAGCAGTaGCCAGAATTCCTGTCTAGT +
Preference number: 5 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFVLLEQ*PEFLSS
Trigger: ACTAGACAGGAATTCTGGCAACTGCTCCAGCAGAAC...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CAA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTTTCTTCCTGGACTTCTaGGCTGCACATCCTCAATCG +
Preference number: 5 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFFFLDF*AAHPQS
Trigger: CGATTGAGGATGTGCAGCCAAGAAGTCCAGGAAGAA...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CAA 90 bp TTGGTCTTATCTCAGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCTGCCTAATCCTCCTTTaGATGAATTTCCATCGAATG +
Preference number: 5 (lower is better)
Translates to: LVLSQLQKRPIGHVRILCCLILL*MNFHRM
Trigger: CATTCGATGGAAATTCATCAAAAGGAGGATTAGGCA...GCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACTGAGATAAGACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp TCTCAGGAACATTTTCTTCATCAACAGAATCTGAAGTGCTGCTTTTGTCCAGAGTTTTGGGACTCCTCTTaGCCTAATCCTCCTTTTGAT +
Preference number: 5 (lower is better)
Translates to: SQEHFLHQQNLKCCFCPEFWDSS*PNPPFD
Trigger: ATCAAAAGGAGGATTAGGCAAAGAGGAGTCCCAAAA...CTCTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAAGAAAATGTTCCTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR CAA 90 bp TACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGGACTCTGGGGTAAGAGACTCTTTTaGGTCTGTTTCTCATTTTGG +
Preference number: 5 (lower is better)
Translates to: YRHLKNDYNNAMWLWGLWGKRLF*VCFSFW
Trigger: CCAAAATGAGAAACAGACCAAAAAGAGTCTCTTACC...CCAGAGTCCCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp AAACAAACCCAGGTAGGTTCACTGTTACCCCTAGGTATGCTTCGTTGGAATTCAACTTCTTTTCCAAAGTaGGTAAGAGACTCTTTTTGG +
Preference number: 5 (lower is better)
Translates to: KQTQVGSLLPLGMLRWNSTSFPK*VRDSFW
Trigger: CCAAAAAGAGTCTCTTACCAACTTTGGAAAAGAAGT...TGAATTCCAACGAAGCATACCTAGGGGTAACAGTGAACCTACCTGGGTTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp TACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGGACTCTGGTTTTCAATTAAAGATTaGACAAGGCCCCATGGCTGT +
Preference number: 5 (lower is better)
Translates to: YRHLKNDYNNAMWLWGLWFSIKD*TRPHGC
Trigger: ACAGCCATGGGGCCTTGTCAAATCTTTAATTGAAAA...CCAGAGTCCCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTGTTTCTGCTGTTCGGTaGAAGGTTCGCCTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFVSAVR*KVRLLL
Trigger: AAGGAGAAGGCGAACCTTCAACCGAACAGCAGAAAC...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CAA 90 bp GACTTTAACAGAGAAATCTTCAAGTTTATAATCCACTCATTCTTGCTTACAGCCGTTTCTGCTGTTCGGTaGAAGGTTCGCCTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: DFNREIFKFIIHSFLLTAVSAVR*KVRLLL
Trigger: AAGGAGAAGGCGAACCTTCAACCGAACAGCAGAAAC...GGCTGTAAGCAAGAATGAGTGGATTATAAACTTGAAGATTTCTCTGTTAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp TTGGTCTTATCTCAGTTACAAAAGCGACCTATTGGACATGTACGGATTCTGTGCTGTATTCTAAGTATGTaGCCATCTCTATGCACAGCA +
Preference number: 5 (lower is better)
Translates to: LVLSQLQKRPIGHVRILCCILSM*PSLCTA
Trigger: TGCTGTGCATAGAGATGGCAACATACTTAGAATACA...GCACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTAACTGAGATAAGACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440446.2
CDS-3UTR CAA 90 bp TCTTCATCAACAGAATCTGAAGTGCTGCTTTTGTCCAGAGAAAGATATTCATTTTCATTTTGGGACTCCTaGGCTGCACATCCTCAATCG +
Preference number: 5 (lower is better)
Translates to: SSSTESEVLLLSRERYSFSFWDS*AAHPQS
Trigger: CGATTGAGGATGTGCAGCCAAGGAGTCCCAAAATGA...AAATGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS TCA 90 bp GTAAGTGGAATCCACTTCTGTGGTGTAGTTTTCACACAAGGAAACTaGAGCAGATTAATTCCATTTCATCGAACCAGACAACAGTGCATT +
Preference number: 5 (lower is better)
Translates to: VSGIHFCGVVFTQGN*SRLIPFHRTRQQCI
Trigger: AATGCACTGTTGTCTGGTTCGATGAAATGGAATTAATCTGCTTCAGTTTCCTTGTGTGAAAACTACACCACAGAAGTGGATTCCACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467895.1
CDS-3UTR CAA 90 bp GGTAGGGGACATCATGTGTCAGTACTTCTGAATCTACCAAATAAAATCGTGCTTGGTAAGAGACTCTTTTaGGTCTGTTTCTCATTTTGG +
Preference number: 5 (lower is better)
Translates to: GRGHHVSVLLNLPNKIVLGKRLF*VCFSFW
Trigger: CCAAAATGAGAAACAGACCAAAAAGAGTCTCTTACC...AAGCACGATTTTATTTGGTAGATTCAGAAGTACTGACACATGATGTCCCCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000472384.5
CDS-3UTR CAA 90 bp TCATTCTCTACAGGCATCTCAAAAATGACTATAATAATGCCATGTGGCTTTGGGCAGCATGTTCTATCTTaGACAGCTTCAGAAACAGTG +
Preference number: 5 (lower is better)
Translates to: SFSTGISKMTIIMPCGFGQHVLS*TASETV
Trigger: CACTGTTTCTGAAGCTGTCAAAGATAGAACATGCTG...CCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCCTGTAGAGAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp CCCTCTAACGGAGTCAATACTTTCATTCTCTACAGGCATCTCAAAAATGACTATATAATCCACTCATTCTaGCTTACAGCCAGACACTAC +
Preference number: 5 (lower is better)
Translates to: PSNGVNTFILYRHLKNDYIIHSF*LTARHY
Trigger: GTAGTGTCTGGCTGTAAGCAAGAATGAGTGGATTAT...ATAGTCATTTTTGAGATGCCTGTAGAGAATGAAAGTATTGACTCCGTTAGAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS TCA 90 bp ACAGCCATGCCAGTCTTATTCTTATTTAGTAGATCAAACGTTTTCTaGAGCATAATGAGTGAGCTCTTCAGCTGTTCAAGCATCACTATG +
Preference number: 5 (lower is better)
Translates to: TAMPVLFLFSRSNVF*SIMSELFSCSSITM
Trigger: CATAGTGATGCTTGAACAGCTGAAGAGCTCACTCATTATGCTTCAGAAAACGTTTGATCTACTAAATAAGAATAAGACTGGCATGGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000466898.1
ENST00000472026.5
ENST00000479212.5
ENST00000491038.1
CDS GCA 90 bp ATCTCTGCGGTTTTAGTCCTTCAGATCACTAGCTTTCAACAGCCATaGCAGTCTTATTCTTATTTAGTAGATCAAACGTTTTCTGAAGCA +
Preference number: 5 (lower is better)
Translates to: ISAVLVLQITSFQQP*QSYSYLVDQTFSEA
Trigger: TGCTTCAGAAAACGTTTGATCTACTAAATAAGAATAAGACTGGCATGGCTGTTGAAAGCTAGTGATCTGAAGGACTAAAACCGCAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000466898.1
ENST00000472026.5
ENST00000479212.5
ENST00000491038.1
CDS-3UTR CAA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTTTTGGGACTCCTCTTaGCCTAATCCTCCTTTTGAT +
Preference number: 5 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRFWDSS*PNPPFD
Trigger: ATCAAAAGGAGGATTAGGCAAAGAGGAGTCCCAAAA...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CAA 90 bp CCCTCTAACGGAGTCAATACTTTCATTCTCTACAGGCATCTCAAAAATGACTATGGTAAGAGACTCTTTTaGGTCTGTTTCTCATTTTGG +
Preference number: 5 (lower is better)
Translates to: PSNGVNTFILYRHLKNDYGKRLF*VCFSFW
Trigger: CCAAAATGAGAAACAGACCAAAAAGAGTCTCTTACC...ATAGTCATTTTTGAGATGCCTGTAGAGAATGAAAGTATTGACTCCGTTAGAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp TTCTCATTTTGGGACTCCTCTTTGCCTAATCCTCCTTTTGATGAATTTCCATCGACTTCTTTTCCAAAGTaGGTAAGAGACTCTTTTTGG +
Preference number: 5 (lower is better)
Translates to: FSFWDSSLPNPPFDEFPSTSFPK*VRDSFW
Trigger: CCAAAAAGAGTCTCTTACCAACTTTGGAAAAGAAGT...CGATGGAAATTCATCAAAAGGAGGATTAGGCAAAGAGGAGTCCCAAAATGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR CAA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGCAGCATGTTCTATCTTaGACAGCTTCAGAAACAGTG +
Preference number: 5 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRQHVLS*TASETV
Trigger: CACTGTTTCTGAAGCTGTCAAAGATAGAACATGCTG...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CAA 90 bp GACTTCACTGTAGAAATGAGACCATACCACTCAATTCAGGGTGTGTCATTTTCTAGGTTTCTTCTTATATaGTCCTGTTTATCCTCTTGG +
Preference number: 5 (lower is better)
Translates to: DFTVEMRPYHSIQGVSFSRFLLI*SCLSSW
Trigger: CCAAGAGGATAAACAGGACAATATAAGAAGAAACCT...AGAAAATGACACACCCTGAATTGAGTGGTATGGTCTCATTTCTACAGTGAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGATAATCCACTCATTCTaGCTTACAGCCAGACACTAC +
Preference number: 5 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRIIHSF*LTARHY
Trigger: GTAGTGTCTGGCTGTAAGCAAGAATGAGTGGATTAT...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTTGCCTAATCCTCCTTTaGATGAATTTCCATCGAATG +
Preference number: 5 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGCLILL*MNFHRM
Trigger: CATTCGATGGAAATTCATCAAAAGGAGGATTAGGCA...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CAA 90 bp TCTGTTTCTGAAACCCGACTAATTGATTCACTGGTAAAACTGATTGACTTGGATTGCCTAATCCTCCTTTaGATGAATTTCCATCGAATG +
Preference number: 5 (lower is better)
Translates to: SVSETRLIDSLVKLIDLDCLILL*MNFHRM
Trigger: CATTCGATGGAAATTCATCAAAAGGAGGATTAGGCA...ATCCAAGTCAATCAGTTTTACCAGTGAATCAATTAGTCGGGTTTCAGAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484714.2
CDS-3UTR CAA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTTTTTGGGACTCCTCTTaGCCTAATCCTCCTTTTGAT +
Preference number: 5 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFFWDSS*PNPPFD
Trigger: ATCAAAAGGAGGATTAGGCAAAGAGGAGTCCCAAAA...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
38% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CAA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTGGTAAGAGACTCTTTTaGGTCTGTTTCTCATTTTGG +
Preference number: 5 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGGKRLF*VCFSFW
Trigger: CCAAAATGAGAAACAGACCAAAAAGAGTCTCTTACC...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CAA 90 bp CTAGAACTGGCAAATTTCTGCATAAAGCGTGAACTGGTAAAGAGCAATTCAAACACTTCTTTTCCAAAGTaGGTAAGAGACTCTTTTTGG +
Preference number: 5 (lower is better)
Translates to: LELANFCIKRELVKSNSNTSFPK*VRDSFW
Trigger: CCAAAAAGAGTCTCTTACCAACTTTGGAAAAGAAGT...GTTTGAATTGCTCTTTACCAGTTCACGCTTTATGCAGAAATTTGCCAGTTCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472384.5
ENST00000484714.2
CDS-3UTR CAA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTTCTGAAGTGCTGCTTTaGTCCAGAGAAAGATATTCA +
Preference number: 5 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGSEVLL*SRERYS
Trigger: TGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGA...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CAA 90 bp ATTCTTGCTTACAGCCAGACACTACATAAATCCTTACCAAAACAAAACAAACCCTTTTCAATTAAAGATTaGACAAGGCCCCATGGCTGT +
Preference number: 5 (lower is better)
Translates to: ILAYSQTLHKSLPKQNKPFSIKD*TRPHGC
Trigger: ACAGCCATGGGGCCTTGTCAAATCTTTAATTGAAAA...GGGTTTGTTTTGTTTTGGTAAGGATTTATGTAGTGTCTGGCTGTAAGCAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTTTTCAATTAAAGATTaGACAAGGCCCCATGGCTGT +
Preference number: 5 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRFSIKD*TRPHGC
Trigger: ACAGCCATGGGGCCTTGTCAAATCTTTAATTGAAAA...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CAA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTCAGCATGTTCTATCTTaGACAGCTTCAGAAACAGTG +
Preference number: 5 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFQHVLS*TASETV
Trigger: CACTGTTTCTGAAGCTGTCAAAGATAGAACATGCTG...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CAA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTTACAAAAGCGACCTATaGGACATGTACGGATTCTGT +
Preference number: 5 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFYKSDL*DMYGFC
Trigger: ACAGAATCCGTACATGTCCAATAGGTCGCTTTTGTA...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp AACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTGGATGGTTCTTCCTTTaGACTGTTGGTATTCTAAGT +
Preference number: 5 (lower is better)
Translates to: NIEMFYAKILHSSGFLPGGWFFL*TVGILS
Trigger: ACTTAGAATACCAACAGTCAAAAGGAAGAACCATCC...ACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS-3UTR CAA 90 bp AGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGTATTTTTGCCTAATCCTCCTTTaGATGAATTTCCATCGAATG +
Preference number: 5 (lower is better)
Translates to: RNVLCQNPSFVWFSSRYFCLILL*MNFHRM
Trigger: CATTCGATGGAAATTCATCAAAAGGAGGATTAGGCA...AAAATACCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CAA 90 bp TCCAGAGAAAGATATTCATTTTTATTCAAGTCCAGTGACTTTGATGGCACTCTAGGTAAGAGACTCTTTTaGGTCTGTTTCTCATTTTGG +
Preference number: 5 (lower is better)
Translates to: SRERYSFLFKSSDFDGTLGKRLF*VCFSFW
Trigger: CCAAAATGAGAAACAGACCAAAAAGAGTCTCTTACC...TAGAGTGCCATCAAAGTCACTGGACTTGAATAAAAATGAATATCTTTCTCTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000472384.5
ENST00000484714.2
CDS-3UTR CAA 90 bp AAACATAGAAATGTTCTATGCCAAAATCCTTCATTCGTCTGGTTTTCTTCCAGGACTTCTTTTCCAAAGTaGGTAAGAGACTCTTTTTGG +
Preference number: 5 (lower is better)
Translates to: KHRNVLCQNPSFVWFSSRTSFPK*VRDSFW
Trigger: CCAAAAAGAGTCTCTTACCAACTTTGGAAAAGAAGT...CCTGGAAGAAAACCAGACGAATGAAGGATTTTGGCATAGAACATTTCTATGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000472026.5
CDS-3UTR CAA 90 bp ATTCTTGCTTACAGCCAGACACTACATAAATCCTTACCAAAACAAAACAAACCCAGGTTTCTTCTTATATaGTCCTGTTTATCCTCTTGG +
Preference number: 5 (lower is better)
Translates to: ILAYSQTLHKSLPKQNKPRFLLI*SCLSSW
Trigger: CCAAGAGGATAAACAGGACAATATAAGAAGAAACCT...GGGTTTGTTTTGTTTTGGTAAGGATTTATGTAGTGTCTGGCTGTAAGCAAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358160.9
ENST00000440446.2
CDS CAA 90 bp CCCTTCATTCATCACATGGCCGGGCACCTGGTACTGGCTATTGGTTaGGGACCTCAATTCCTCTCCATATGGACATCTTCACAGAGCTGC +
Preference number: 6 (lower is better)
Translates to: PFIHHMAGHLVLAIG*GPQFLSIWTSSQSC
Trigger: GCAGCTCTGTGAAGATGTCCATATGGAGAGGAATTGAGGTCCCAAACCAATAGCCAGTACCAGGTGCCCGGCCATGTGATGAATGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479212.5
CDS CCA 72 bp CATTCATCACATGGCCGGGCACCTGGTACTGGCTATTaGTTTGGGACCTCAATTCCTCTCCATATGGACATC +
Preference number: 6 (lower is better)
Translates to: HSSHGRAPGTGY*FGTSIPLHMDI
Trigger: GATGTCCATATGGAGAGGAATTGAGGTCCCAAACCAATAGCCAGTACCAGGTGCCCGGCCATGTGATGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479212.5
CDS CCA 72 bp TCCCCTTCATTCATCACATGGCCGGGCACCTGGTACTaGCTATTGGTTTGGGACCTCAATTCCTCTCCATAT +
Preference number: 6 (lower is better)
Translates to: SPSFITWPGTWY*LLVWDLNSSPY
Trigger: ATATGGAGAGGAATTGAGGTCCCAAACCAATAGCCAGTACCAGGTGCCCGGCCATGTGATGAATGAAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479212.5
CDS CCA 72 bp CTTGAATCCCCTTCATTCATCACATGGCCGGGCACCTaGTACTGGCTATTGGTTTGGGACCTCAATTCCTCT +
Preference number: 6 (lower is better)
Translates to: LESPSFITWPGT*YWLLVWDLNSS
Trigger: AGAGGAATTGAGGTCCCAAACCAATAGCCAGTACCAGGTGCCCGGCCATGTGATGAATGAAGGGGATTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479212.5
CDS CAA 72 bp CATCACATGGCCGGGCACCTGGTACTGGCTATTGGTTaGGGACCTCAATTCCTCTCCATATGGACATCTTCA +
Preference number: 6 (lower is better)
Translates to: HHMAGHLVLAIG*GPQFLSIWTSS
Trigger: TGAAGATGTCCATATGGAGAGGAATTGAGGTCCCAAACCAATAGCCAGTACCAGGTGCCCGGCCATGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479212.5
CDS CAA 72 bp TTTCCTCTACATCTTCCTGTAAGTCGGTGGCAAGGCTaGAATCCCCTTCATTCATCACATGGCCGGGCACCT +
Preference number: 6 (lower is better)
Translates to: FPLHLPVSRWQG*NPLHSSHGRAP
Trigger: AGGTGCCCGGCCATGTGATGAATGAAGGGGATTCAAGCCTTGCCACCGACTTACAGGAAGATGTAGAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479212.5
CDS CAA 90 bp GAATCCCCTTCATTCATCACATGGCCGGGCACCTGGTACTGGCTATaGGTTTGGGACCTCAATTCCTCTCCATATGGACATCTTCACAGA +
Preference number: 6 (lower is better)
Translates to: ESPSFITWPGTWYWL*VWDLNSSPYGHLHR
Trigger: TCTGTGAAGATGTCCATATGGAGAGGAATTGAGGTCCCAAACCAATAGCCAGTACCAGGTGCCCGGCCATGTGATGAATGAAGGGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479212.5
CDS CAA 72 bp TTTCCTCTACATCTTCCTGTAAGTCGGTGGCAAGGCTaGAATCCCCTTCATTCATCACCTGACGGACAGTCG +
Preference number: 6 (lower is better)
Translates to: FPLHLPVSRWQG*NPLHSSPDGQS
Trigger: CGACTGTCCGTCAGGTGATGAATGAAGGGGATTCAAGCCTTGCCACCGACTTACAGGAAGATGTAGAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358160.9
ENST00000472384.5
ENST00000484714.2
ENST00000486457.5
ENST00000498183.5
CDS CAA 72 bp TCATTCATCACATGGCCGGGCACCTGGTACTGGCTATaGGTTTGGGACCTCAATTCCTCTCCATATGGACAT +
Preference number: 6 (lower is better)
Translates to: SFITWPGTWYWL*VWDLNSSPYGH
Trigger: ATGTCCATATGGAGAGGAATTGAGGTCCCAAACCAATAGCCAGTACCAGGTGCCCGGCCATGTGATGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479212.5
CDS GCA 72 bp CAGTATATAACCAAGCATAGTCTGCGATGTCGCTGGTaGCTTGCTAGAATGAGAGAATGCACCTCACGGATT +
Preference number: 6 (lower is better)
Translates to: QYITKHSLRCRW*LARMRECTSRI
Trigger: AATCCGTGAGGTGCATTCTCTCATTCTAGCAAGGCACCAGCGACATCGCAGACTATGCTTGGTTATATACTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472026.5
CDS CCA 72 bp ATACAGTATATAACCAAGCATAGTCTGCGATGTCGCTaGTGCCTTGCTAGAATGAGAGAATGCACCTCACGG +
Preference number: 6 (lower is better)
Translates to: IQYITKHSLRCR*CLARMRECTSR
Trigger: CCGTGAGGTGCATTCTCTCATTCTAGCAAGGCACCAGCGACATCGCAGACTATGCTTGGTTATATACTGTAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472026.5
CDS CAA 90 bp CTTGGAGGCGGAGACGGTAAAAGGACTGAGCAGCATGTTCTATCTTaGACAGCTTCAGAAACAGTGTCACATTCAACAAAACTAATAACA +
Preference number: 6 (lower is better)
Translates to: LGGGDGKRTEQHVLS*TASETVSHSTKLIT
Trigger: TGTTATTAGTTTTGTTGAATGTGACACTGTTTCTGAAGCTGTCAAAGATAGAACATGCTGCTCAGTCCTTTTACCGTCTCCGCCTCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000466898.1
ENST00000472026.5
ENST00000479212.5
ENST00000491038.1
CDS TCA 72 bp GAGACGGTAAAAGGACTGAGCAGCATGTTCTATCTTTaGCAGCTTCAGAAACAGTGTCACATTCAACAAAAC +
Preference number: 6 (lower is better)
Translates to: ETVKGLSSMFYL*QLQKQCHIQQN
Trigger: GTTTTGTTGAATGTGACACTGTTTCTGAAGCTGTCAAAGATAGAACATGCTGCTCAGTCCTTTTACCGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358160.9
ENST00000440446.2
ENST00000466898.1
ENST00000472026.5
ENST00000479212.5
ENST00000491038.1
CDS CCA 72 bp TACAGTGAGCTACAGTGTAAGTGGAATCCACTTCTGTaGTGTAGTTTTCACACAAGGAAACTGAAGCAGATT +
Preference number: 6 (lower is better)
Translates to: YSELQCKWNPLL*CSFHTRKLKQI
Trigger: AATCTGCTTCAGTTTCCTTGTGTGAAAACTACACCACAGAAGTGGATTCCACTTACACTGTAGCTCACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467895.1
CDS TCA 72 bp AATCCATGCCCAGCTGCATACTTCATCAACAGAATCTaGAGTGCTGCTTTTGTCCAGAGAAAGATATTCATT +
Preference number: 6 (lower is better)
Translates to: NPCPAAYFINRI*SAAFVQRKIFI
Trigger: AATGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAAGTATGCAGCTGGGCATGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479212.5
CDS CAA 90 bp CATGCCCAGCTGCATACTTCATCAACAGAATCTGAAGTGCTGCTTTaGTCCAGAGAAAGATATTCATTTTTATTCAAGTCCAGTGACTTT +
Preference number: 6 (lower is better)
Translates to: HAQLHTSSTESEVLL*SRERYSFLFKSSDF
Trigger: AAAGTCACTGGACTTGAATAAAAATGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAAGTATGCAGCTGGGCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479212.5
CDS TCA 72 bp ATCCACTTCTGTGGTGTAGTTTTCACACAAGGAAACTaGAGCAGATTAATTCCATTTCATCGAACCAGACAA +
Preference number: 6 (lower is better)
Translates to: IHFCGVVFTQGN*SRLIPFHRTRQ
Trigger: TTGTCTGGTTCGATGAAATGGAATTAATCTGCTTCAGTTTCCTTGTGTGAAAACTACACCACAGAAGTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467895.1
CDS TCA 72 bp AGGCATATAGATATTAGTGTTCTAAATATGACTGGCTaGGTGGATTCCTATAGAATACCCTGGGATTCAGAC +
Preference number: 6 (lower is better)
Translates to: RHIDISVLNMTG*VDSYRIPWDSD
Trigger: GTCTGAATCCCAGGGTATTCTATAGGAATCCACTCAGCCAGTCATATTTAGAACACTAATATCTATATGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466898.1
CDS GCA 72 bp ATGCCCAGCTGCATACTTCATCAACAGAATCTGAAGTaGTGCTTTTGTCCAGAGAAAGATATTCATTTTTAT +
Preference number: 6 (lower is better)
Translates to: MPSCILHQQNLK*CFCPEKDIHFY
Trigger: ATAAAAATGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAAGTATGCAGCTGGGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479212.5
CDS GCA 72 bp AGAAAGCTGTGTATTCTAAGTATGTTGCCATCTCTATaGACAGCAGAGCTCCAAATATTTAATGACAACTAT +
Preference number: 6 (lower is better)
Translates to: RKLCILSMLPSL*TAELQIFNDNY
Trigger: ATAGTTGTCATTAAATATTTGGAGCTCTGCTGTGCATAGAGATGGCAACATACTTAGAATACACAGCTTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440446.2
ENST00000488680.1
CDS CAA 72 bp CTGCATACTTCATCAACAGAATCTGAAGTGCTGCTTTaGTCCAGAGAAAGATATTCATTTTTATTCAAGTCC +
Preference number: 6 (lower is better)
Translates to: LHTSSTESEVLL*SRERYSFLFKS
Trigger: GGACTTGAATAAAAATGAATATCTTTCTCTGGACAAAAGCAGCACTTCAGATTCTGTTGATGAAGTATGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479212.5